BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013727
(437 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/416 (84%), Positives = 392/416 (94%), Gaps = 3/416 (0%)
Query: 1 MAEEKE-VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EEKE VKTFKELG+ D+LV AC+N+GWK P+KIQ E+IPHALEGKDLIGLAQTGSGKT
Sbjct: 1 MEEEKEEVKTFKELGVCDQLVTACDNLGWKNPTKIQIESIPHALEGKDLIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
GAFALPILQ+LLE +E ++V AFFACVLSPTRELAIQI+EQFEALGS I ++CAVLVGG
Sbjct: 61 GAFALPILQSLLEASE--KSVQAFFACVLSPTRELAIQIAEQFEALGSDIGVKCAVLVGG 118
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
VDM+QQ++ALGKRPHIVVATPGRL+DHL+NTKGFSL TLKYLVLDEADRLLN+DFEKSLD
Sbjct: 119 VDMVQQSIALGKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSLD 178
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
EIL VIPR R+T+LFSATMTKKVKKLQRACL+NPVKIEAASKYSTVDTLKQ+YRF+PAKY
Sbjct: 179 EILKVIPRERRTFLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQEYRFIPAKY 238
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
KDCYLVYILTE S S++MVFTRTCDAT LAL+LRNLG RAIPI+GHM+QSKRLGALNKF
Sbjct: 239 KDCYLVYILTEKSGSTSMVFTRTCDATTFLALVLRNLGLRAIPINGHMTQSKRLGALNKF 298
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR+GVAISLVNQ
Sbjct: 299 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQ 358
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
YE+EW++QIEKLIGKKLPE+PA EEEVLLLLE +TEAKRISQ +IK+SG+ R+RKG
Sbjct: 359 YEVEWFIQIEKLIGKKLPEYPAREEEVLLLLEPITEAKRISQTSIKNSGDARKRKG 414
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/404 (83%), Positives = 378/404 (93%), Gaps = 2/404 (0%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++EVK+FK+LG+ D+LVEAC+++GWK P+KIQ EA+PHALEGKDLIGLAQTGSGKTGAF
Sbjct: 21 EKEEVKSFKDLGICDQLVEACDSLGWKNPTKIQVEAVPHALEGKDLIGLAQTGSGKTGAF 80
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQALLE +Q++V FFACVLSPTRELAIQI+EQFEALGSGI LRC VLVGGVD+
Sbjct: 81 ALPILQALLE--SSQKSVQPFFACVLSPTRELAIQIAEQFEALGSGIGLRCGVLVGGVDI 138
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+QQTL L KRPHIVVATPGRL+DHL+NTKGFSL TLKYLVLDEADRLLN++FEKSLDEIL
Sbjct: 139 VQQTLILAKRPHIVVATPGRLLDHLSNTKGFSLRTLKYLVLDEADRLLNEEFEKSLDEIL 198
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
NVIPR R+TYLFSATMTKKVKKLQRACL+NPVKIEAASKYSTVDTLKQQYRFVP+K+KDC
Sbjct: 199 NVIPRDRKTYLFSATMTKKVKKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVPSKHKDC 258
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYILTE+S S+ MVFTRTCDAT LAL+LRNLG RAIPI+GHMSQ KRLGALNKFKA
Sbjct: 259 YLVYILTEMSNSTAMVFTRTCDATSFLALVLRNLGLRAIPINGHMSQPKRLGALNKFKAR 318
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ECN+LICTDVASRGLDIPSVDMVINYD+P+NSKDYIHRVGRTARAGR+GVAISLVNQYEL
Sbjct: 319 ECNVLICTDVASRGLDIPSVDMVINYDVPSNSKDYIHRVGRTARAGRSGVAISLVNQYEL 378
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
EWYLQIE LIGKKLPEFPA+EEEVL+LL+RV +AKRIS +K+
Sbjct: 379 EWYLQIENLIGKKLPEFPAQEEEVLMLLDRVIDAKRISHTKLKE 422
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/442 (77%), Positives = 395/442 (89%), Gaps = 9/442 (2%)
Query: 1 MAEEKEV-KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EE EV KTF ELG+R+ELV+ACE +GWK PSKIQAEA+P ALEGKD+IGLAQTGSGKT
Sbjct: 1 MEEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIA------ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRC 113
GAFA+PILQALLE + +R PAFFACVLSPTRELAIQI+EQFEALG+ ISLRC
Sbjct: 61 GAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRC 120
Query: 114 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 173
AVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKGFSL +LKYLVLDEADRLLN+D
Sbjct: 121 AVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNED 180
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYR 233
FEKSL++IL IPR R+T+LFSATMTKKV+KLQRACL+NPVKIEAASKYSTVDTLKQQYR
Sbjct: 181 FEKSLNQILEEIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYR 240
Query: 234 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
FV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+LR+LG RAIPISG M+QSKRL
Sbjct: 241 FVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
GALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+GV
Sbjct: 301 GALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVG 360
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLERV EAK++S M +K+SG ++RR
Sbjct: 361 ISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR 420
Query: 414 KGGDEDDDIGRQFGINKKKLSK 435
G++D++ R G NK + +K
Sbjct: 421 --GEDDEESERFLGGNKDRGNK 440
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/444 (77%), Positives = 395/444 (88%), Gaps = 9/444 (2%)
Query: 1 MAEEKEV-KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EE EV KTF ELG+R+ELV+ACE +GWK PSKIQAEA+P ALEGKD+IGLAQTGSGKT
Sbjct: 1 MEEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIA------ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRC 113
GAFA+PILQALLE + +R PAFFACVLSPTRELAIQI+EQFEALG+ ISLRC
Sbjct: 61 GAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRC 120
Query: 114 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 173
AVL GG+D MQQT+ALGKRPH++VATPGRL DH+++TKGFSL +LKYLVLDEADRLLN+D
Sbjct: 121 AVLFGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNED 180
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYR 233
FEKSL++IL IPR R+T+LFSATMTKKV+KLQRACL+NPVKIEAASKYSTVDTLKQQYR
Sbjct: 181 FEKSLNQILEEIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYR 240
Query: 234 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
FV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+LR+LG RAIPISG M+QSKRL
Sbjct: 241 FVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
GALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+GV
Sbjct: 301 GALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVG 360
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLERV EAK++S M +K+SG ++RR
Sbjct: 361 ISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR 420
Query: 414 KGGDEDDDIGRQFGINKKKLSKRK 437
G++D++ R G NK + +K +
Sbjct: 421 --GEDDEESERFLGGNKDRGNKER 442
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/405 (83%), Positives = 377/405 (93%), Gaps = 6/405 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ +EVKTF+ LG+ ++LVEAC+++GWK PSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF
Sbjct: 4 DNEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 63
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQALLE + AFFACVLSPTRELAIQI+EQFEALGSGI ++CAVLVGGVDM
Sbjct: 64 ALPILQALLEAPQ------AFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDM 117
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+QQ + L KRPH+VV TPGRL+DHLTNTKGFSL TLKYLVLDEADRLLN+DFEKS+DEIL
Sbjct: 118 VQQAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEIL 177
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
N IPR R+TYLFSATMTKKV+KLQRACL+NPVKIEAA+KYSTVDTLKQQY F+PAKYK+C
Sbjct: 178 NEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKEC 237
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYILTE+S S++MVFTRTCDATRLL+L+LRNLG RAIPISG M+Q+KRLGALNKFKAG
Sbjct: 238 YLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAG 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGR+GVAISLVNQYEL
Sbjct: 298 ECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYEL 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
EWY+QIEKLIGKKLP+F A+EEEVL+LLERV EAKRIS M IK++
Sbjct: 358 EWYIQIEKLIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKIKET 402
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/444 (77%), Positives = 395/444 (88%), Gaps = 9/444 (2%)
Query: 1 MAEEKEV-KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EE EV KTF ELG+R+ELV+ACE +GWK PSKIQAEA+P ALEGKD+IGLAQTGSGKT
Sbjct: 1 MEEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIA------ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRC 113
GAFA+PILQALLE + +R PAFFACVLSPTRELAIQI+EQFEALG+ ISLRC
Sbjct: 61 GAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRC 120
Query: 114 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 173
AVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKGFSL +LKYLVLDEADRLLN+D
Sbjct: 121 AVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNED 180
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYR 233
FEKSL++IL IP R+T+LFSATMTKKV+KLQRACL+NPVKIEAASKYSTVDTLKQQYR
Sbjct: 181 FEKSLNQILEEIPLERETFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYR 240
Query: 234 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
FV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+LR+LG RAIPISG M+QSKRL
Sbjct: 241 FVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
GALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+GV
Sbjct: 301 GALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVG 360
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLERV EAK++S M +K+SG ++RR
Sbjct: 361 ISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR 420
Query: 414 KGGDEDDDIGRQFGINKKKLSKRK 437
G++D++ R G NK + +K +
Sbjct: 421 --GEDDEESERFLGGNKDRGNKER 442
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/444 (77%), Positives = 395/444 (88%), Gaps = 9/444 (2%)
Query: 1 MAEEKEV-KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EE EV KTF ELG+R+ELV+ACE +GWK PSKIQAEA+P ALEGKD+IGLAQTGSGKT
Sbjct: 1 MEEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIA------ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRC 113
GAFA+PILQALLE + +R PAFFACVLSPTRELAIQI+EQFEALG+ ISLRC
Sbjct: 61 GAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRC 120
Query: 114 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 173
AVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKGFSL +LKYLVLDEADRLLN+D
Sbjct: 121 AVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNED 180
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYR 233
FEKSL++IL IP R+T+LFSATMTKKV+KLQRACL+NPVKIEAASKYSTVDTLKQQYR
Sbjct: 181 FEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYR 240
Query: 234 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
FV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+LR+LG RAIPISG M+QSKRL
Sbjct: 241 FVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
GALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+GV
Sbjct: 301 GALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVG 360
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLERV EAK++S M +K+SG ++RR
Sbjct: 361 ISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR 420
Query: 414 KGGDEDDDIGRQFGINKKKLSKRK 437
G++D++ R G NK + +K +
Sbjct: 421 --GEDDEESERFLGGNKDRGNKER 442
>gi|225468923|ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
vinifera]
Length = 470
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/442 (83%), Positives = 406/442 (91%), Gaps = 12/442 (2%)
Query: 1 MAEE-KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
MAE+ KEVK+FK+LG+ ++LVEACEN+GWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT
Sbjct: 35 MAEDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 94
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
GAFALPILQALL+ T FACVLSPTRELAIQI+EQFEALGSGI L+CAVLVGG
Sbjct: 95 GAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGG 148
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
VD QQ +AL KRPHIVV TPGRLMDHL+NTKGFSL T+KYLVLDEADRLLNDDFEK++D
Sbjct: 149 VDHTQQAIALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAID 208
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
EIL+VIPR R+TYLFSATMTKKV+KLQRACL+NPVKIE ASKYSTVDTLKQQYRFVPAKY
Sbjct: 209 EILSVIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYSTVDTLKQQYRFVPAKY 268
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
K+CYLVYILTE+S S+TMVFTRTCDATRLLAL+LRNLG RAIPISGHMSQ+KRLGALNKF
Sbjct: 269 KECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIPISGHMSQAKRLGALNKF 328
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
KAGECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGR+GVAISLVNQ
Sbjct: 329 KAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQ 388
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDE- 418
YELEWY+QIEKLIGKKLPEFPA+EEEVLLLLERVTEAKRISQM +K++G K++R+GGDE
Sbjct: 389 YELEWYIQIEKLIGKKLPEFPAQEEEVLLLLERVTEAKRISQMKVKETGGKKKRRGGDEG 448
Query: 419 DDDIGRQF----GINKKKLSKR 436
+++I R G + KKL KR
Sbjct: 449 EEEIDRYLASKNGKSSKKLKKR 470
>gi|359473682|ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Vitis vinifera]
Length = 436
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/442 (82%), Positives = 402/442 (90%), Gaps = 12/442 (2%)
Query: 1 MAEE-KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
MAE+ KEVK+FK+LG+ ++LVEACEN+GWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT
Sbjct: 1 MAEDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
GAFALPILQALL+ T FACVLSPTRELAIQI+EQFEALGSGI L+CAVLVGG
Sbjct: 61 GAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGG 114
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
VD QQ +AL KRPHIVV T G LMDHL+NTKGFSL T+KYLVLDEADRLLNDDFEK++D
Sbjct: 115 VDHTQQAIALAKRPHIVVGTLGXLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAID 174
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
EIL+VIP+ R+TYLFSATMTKKV+KLQRACL+NPVKIEA SKYSTVDTLKQQYRFVPAKY
Sbjct: 175 EILSVIPQERKTYLFSATMTKKVRKLQRACLRNPVKIEAGSKYSTVDTLKQQYRFVPAKY 234
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
K+CYLVYILTE+S S+TMVFTRTCDATRLLAL+LRNLG AIPISGHMSQ+KRLGALNKF
Sbjct: 235 KECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLGAIPISGHMSQTKRLGALNKF 294
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
KAGECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTA AGR+GVAISLVNQ
Sbjct: 295 KAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQ 354
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDE- 418
YELEWY+QIEKLIGKKLPEFPA+EEEVLLLLERVTEAKRISQM IK++G K++R+GGDE
Sbjct: 355 YELEWYIQIEKLIGKKLPEFPAQEEEVLLLLERVTEAKRISQMKIKETGGKKKRRGGDEG 414
Query: 419 DDDIGRQF----GINKKKLSKR 436
+++I R G + KKL KR
Sbjct: 415 EEEIDRYLASKNGKSSKKLKKR 436
>gi|357505249|ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
Length = 1155
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/436 (75%), Positives = 385/436 (88%), Gaps = 6/436 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KE+K+FK+LGL + LVEACE VGWKTP +IQ EAIP ALEGKDLIGLA+TGSGKTGAF
Sbjct: 721 ENKEMKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAF 780
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE FFACV+SPTRELAIQISEQFEALGS I ++CAVLVGG+DM
Sbjct: 781 ALPILHALLEAPRPNH----FFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDM 836
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+QQ++ + K PHI+V TPGR++DHL NTKGFSL LKYLVLDEADRLLN+DFE+SL+EIL
Sbjct: 837 VQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL 896
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+IPR R+T+LFSATMT KV+KLQR CL+NPVKIE +SKYSTVDTLKQQYRF+PAK+KDC
Sbjct: 897 GMIPRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDC 956
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL+E++ S++MVFTRTCD+TRLLAL+LRNLG +AIPI+GHMSQ KRLGALNKFK+G
Sbjct: 957 YLVYILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSG 1016
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+CNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRTARAGR+GVAISLVNQYEL
Sbjct: 1017 DCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEL 1076
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
EWY+QIEKLIGKKLPE+PA EEEVLLL ERV EAKR++ +K+SG K+RR GD E+D
Sbjct: 1077 EWYVQIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAATKMKESGGKKRRGEGDIGEED 1136
Query: 421 DIGRQFGINKKKLSKR 436
D+ + FG+ +K SK+
Sbjct: 1137 DVDKYFGLKDRKSSKK 1152
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/437 (75%), Positives = 391/437 (89%), Gaps = 7/437 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E E+K+FK+LGL +ELVEAC+N+GWKTP KIQ EAIP AL+GKD+IGLAQTGSGKTGAF
Sbjct: 4 ENNEMKSFKDLGLPEELVEACDNLGWKTPLKIQIEAIPLALQGKDVIGLAQTGSGKTGAF 63
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALL+ FFACVLSPTRELAIQISEQFEALGSGI ++ AVLVGG+DM
Sbjct: 64 ALPILHALLQAPRPNH----FFACVLSPTRELAIQISEQFEALGSGIGVKSAVLVGGIDM 119
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+QQ++ + K PHI+V TPGR++DHL NTKGFSL LKYLVLDEADRLLN+DFE+SL+EIL
Sbjct: 120 VQQSIKIAKHPHIIVGTPGRVLDHLKNTKGFSLSKLKYLVLDEADRLLNEDFEESLNEIL 179
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+IPR R+T+LFSATMTKKV+KLQR CL+NPVKIEA++KYSTVDTLKQQYRF+PAK KDC
Sbjct: 180 GMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIEASTKYSTVDTLKQQYRFLPAKRKDC 239
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYILTE++ S++MVFTRTCDATRLLAL+LRNLG +AIPI+GHMSQ KRLGALNKFK+G
Sbjct: 240 YLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSG 299
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+CNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRTARAGR+GVAISLVNQYEL
Sbjct: 300 DCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEL 359
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG-GD--ED 419
EWY+QIEKLIGKKLPE+PA+EEEVLLL ERV+EAKR++ +K+SG K++R+G GD +D
Sbjct: 360 EWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSEAKRLAATKMKESGGKKKRRGEGDSGDD 419
Query: 420 DDIGRQFGINKKKLSKR 436
+DI + FG+ +K SK+
Sbjct: 420 EDIDKYFGLKDRKSSKK 436
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/436 (75%), Positives = 389/436 (89%), Gaps = 6/436 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +E KTFK+LGL + LVEACE +GWK P KIQ EAIP ALEGKD+IGLAQTGSGKTGAF
Sbjct: 4 ENEETKTFKDLGLSESLVEACEKLGWKNPLKIQTEAIPLALEGKDVIGLAQTGSGKTGAF 63
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FFACVLSPTRELAIQI+EQFEALGS I ++CAVLVGG+DM
Sbjct: 64 ALPILHALLEAPRPK----DFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDM 119
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+QQ++ + K+PHI+V TPGR++DHL +TKGFSL LKYLVLDEADRLLN+DFE+SL+EIL
Sbjct: 120 VQQSIKIAKQPHIIVGTPGRVIDHLKHTKGFSLSRLKYLVLDEADRLLNEDFEESLNEIL 179
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+IPR R+T+LFSATMTKKV+KLQR CL+NPVKIEA+SKYSTVDTLKQQYRF+PAK+KDC
Sbjct: 180 QMIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYRFLPAKHKDC 239
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYILTE++ S++MVFTRTCDATRLLAL+LRNLG +AIPI+GHMSQSKRLGALNKFK+G
Sbjct: 240 YLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPINGHMSQSKRLGALNKFKSG 299
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ECNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRTARAGR+GVAISLVNQYEL
Sbjct: 300 ECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEL 359
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD-- 420
EWY+QIEKLIGKKLPE+PA+EEEVLLL ERV EAKR++ M +K++G K++R+G ++ D
Sbjct: 360 EWYIQIEKLIGKKLPEYPAQEEEVLLLEERVGEAKRLAVMKMKETGGKKKRRGEEDYDGE 419
Query: 421 DIGRQFGINKKKLSKR 436
DI + G+ + K SK+
Sbjct: 420 DIDKYLGLKEGKSSKK 435
>gi|224089124|ref|XP_002308641.1| predicted protein [Populus trichocarpa]
gi|222854617|gb|EEE92164.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/439 (75%), Positives = 375/439 (85%), Gaps = 9/439 (2%)
Query: 1 MAEEKE--VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGK 58
MAEE E VKTF +LG+ ++LVEACE +GWK P+KIQ EAIPHALEGKDLI LAQTGSGK
Sbjct: 1 MAEETEEAVKTFADLGICEQLVEACERLGWKNPTKIQVEAIPHALEGKDLIALAQTGSGK 60
Query: 59 TGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
T AFALP LQALL+ + +VP F+ACVLSPTRELAIQI+EQFEALGS I LRCAVLVG
Sbjct: 61 TAAFALPTLQALLQASVT--SVPVFYACVLSPTRELAIQIAEQFEALGSDIGLRCAVLVG 118
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
GVDM QT+AL KRPHIVV TPGRL+DHL+NTKGFSL TLKYL+LDEADRLLN++FEKSL
Sbjct: 119 GVDMGLQTIALAKRPHIVVGTPGRLLDHLSNTKGFSLRTLKYLILDEADRLLNEEFEKSL 178
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
DEIL VI R R+TYLFSATMTKKV+KLQRACL+NPVKIE ASKYS V+TL+QQ F PAK
Sbjct: 179 DEILTVISRDRKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYSVVETLRQQLLFCPAK 238
Query: 239 YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
YK+CYLV+ LT S +STMVFTRTCDAT LAL+LRNLG RAIPI+GHMSQSKRLGALNK
Sbjct: 239 YKECYLVHALTLKSGASTMVFTRTCDATHFLALVLRNLGLRAIPINGHMSQSKRLGALNK 298
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FKAGECNILICTDVASRGLDIPSVDMV+NYDIPTNSKDYIHRVGRTARAGR+G+AISLVN
Sbjct: 299 FKAGECNILICTDVASRGLDIPSVDMVVNYDIPTNSKDYIHRVGRTARAGRSGLAISLVN 358
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDE 418
Q E+ W+ QIE LIG ++ + +EE++LLLERVTEAKRISQ IK+ G K+R+ GDE
Sbjct: 359 QNEIGWFKQIENLIGIRMSDIRPHQEEIMLLLERVTEAKRISQKQIKEPGGKKRKGRGDE 418
Query: 419 DDD-----IGRQFGINKKK 432
D++ I ++ G KKK
Sbjct: 419 DEEEIDKYISKKDGRFKKK 437
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/436 (75%), Positives = 383/436 (87%), Gaps = 6/436 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KE+K+FK+LGL + LVEACE +GWK P KIQ EAIP ALEGKDLIGLA+TGSGKTGAF
Sbjct: 68 ENKEMKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAF 127
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE FFACV+SPTRELAIQISEQFEALGS I ++CAVLVGG+DM
Sbjct: 128 ALPILHALLEAPRPNH----FFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDM 183
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+QQ++ + K PHI+V TPGR++DHL NTKGFSL LKYLVLDEADRLLN+DFE+SL+EIL
Sbjct: 184 VQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL 243
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+IPR R+T+LFSATMTKKV+KLQR CL+NPVKIE +SKYSTVDTLKQQYRF+PAK+KDC
Sbjct: 244 GMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDC 303
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYILTE++ S++MVFTRTCD+TRLLAL+LRNLG +AIPI+GHMSQ KRLGALNKFK+G
Sbjct: 304 YLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSG 363
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+CNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRTARAGR+GVAISLVNQYEL
Sbjct: 364 DCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEL 423
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR--KGGDEDD 420
EWY+QIEKLIGKKLPE+PA EEEVLLL ERV EAKR++ +K+SG K+RR EDD
Sbjct: 424 EWYVQIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAATKMKESGGKKRRGEGDVGEDD 483
Query: 421 DIGRQFGINKKKLSKR 436
D+ + FG+ +K SK+
Sbjct: 484 DVDKYFGLKDRKSSKK 499
>gi|357500171|ref|XP_003620374.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495389|gb|AES76592.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 431
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/432 (75%), Positives = 380/432 (87%), Gaps = 6/432 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+K+FK+LGL + LVEACE +GWK P KIQ EAIP ALEGKDLIGLA+TGSGKTGAFALPI
Sbjct: 1 MKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPI 60
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L ALLE FFACV+SPTRELAIQISEQFEALGS I ++CAVLVGG+DM+QQ+
Sbjct: 61 LHALLEAPRPNH----FFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQS 116
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ + K PHI+V TPGR++DHL NTKGFSL LKYLVLDEADRLLN+DFE+SL+EIL +IP
Sbjct: 117 VKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIP 176
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R R+T+LFSATMTKKV+KLQR CL+NPVKIE +SKYSTVDTLKQQYRF+PAK+KDCYLVY
Sbjct: 177 RERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYSTVDTLKQQYRFLPAKHKDCYLVY 236
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
ILTE++ S++MVFTRTCD+TRLLAL+LRNLG +AIPI+GHMSQ KRLGALNKFK+G+CNI
Sbjct: 237 ILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNI 296
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRTARAGR+GVAISLVNQYELEWY+
Sbjct: 297 LLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYV 356
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR--KGGDEDDDIGR 424
QIEKLIGKKLPE+PA EEEVLLL ERV EAKR++ +K+SG K+RR EDDD+ +
Sbjct: 357 QIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAATKMKESGGKKRRGEGDVGEDDDVDK 416
Query: 425 QFGINKKKLSKR 436
FG+ +K SK+
Sbjct: 417 YFGLKDRKSSKK 428
>gi|356520446|ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Glycine max]
Length = 438
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/439 (73%), Positives = 381/439 (86%), Gaps = 7/439 (1%)
Query: 1 MAEEKE-VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EE E +KTF++LG + LVEACE +GWK+P KI EAIP ALEGKD+ GLAQTG GKT
Sbjct: 1 MGEENEGIKTFRDLGFSESLVEACEKLGWKSPLKIXTEAIPIALEGKDVTGLAQTGYGKT 60
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
GAFALPIL ALLE + FF CVLSPTRELAIQI+EQFEALGS I ++CAVLVGG
Sbjct: 61 GAFALPILHALLEAPRPKH----FFDCVLSPTRELAIQIAEQFEALGSXIGVKCAVLVGG 116
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
+DM+QQ++ + K+PHI+V TP R++DHL +TKGFSLG LKYLVLDEADRLLN+DFE+SL+
Sbjct: 117 IDMVQQSIKIAKQPHIIVGTPRRVLDHLKHTKGFSLGRLKYLVLDEADRLLNEDFEESLN 176
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
EIL +IPR R+T+LFSATMTKKV+KLQR CL+NPVKIEA+SKYSTVDTLKQQY F+PAK+
Sbjct: 177 EILQMIPRERKTFLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQYLFLPAKH 236
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
KDCY VYILTE+S S++MVFT TCDATRLLAL+LRNLG +AIPI+GHMSQSKRLGA NKF
Sbjct: 237 KDCYFVYILTEMSGSTSMVFTCTCDATRLLALILRNLGLKAIPINGHMSQSKRLGASNKF 296
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
K+GECNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRTARAGR GVAISLVNQ
Sbjct: 297 KSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRFGVAISLVNQ 356
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDED 419
YEL WY+QIEKLIG KLPE+PA+EEEVLLL ERV+EAKR++ M +K++G K++R+G ++
Sbjct: 357 YELGWYIQIEKLIGNKLPEYPAQEEEVLLLEERVSEAKRLAVMKMKETGGKKKRRGEEDY 416
Query: 420 D--DIGRQFGINKKKLSKR 436
D DI + G+ + K SK+
Sbjct: 417 DGEDIDKYLGLKEGKSSKK 435
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 293/410 (71%), Positives = 353/410 (86%), Gaps = 6/410 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K+ TF+ LG+ ++L EAC+ +GWK P++IQ +A+P AL+G D+IGLAQTGSGKT FAL
Sbjct: 16 KKAPTFRSLGVCEQLAEACDALGWKAPTQIQVDAVPVALKGHDIIGLAQTGSGKTATFAL 75
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQALLE + FACVLSPTRELAIQI+EQFEALGSGI L+CAVLVGG+DMM
Sbjct: 76 PILQALLENPQ------PLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGIDMMA 129
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q++AL KRPH+VV TPGRL+DHLTNTKGFSL T+KYLVLDEADRLLN DFE+ +DEIL V
Sbjct: 130 QSVALAKRPHVVVGTPGRLVDHLTNTKGFSLRTIKYLVLDEADRLLNMDFEQEIDEILKV 189
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IP+ R+TYLFSATMT KV KLQRACLKNPVK+E ++KYSTVD+LKQ+Y F+PAKYKDCYL
Sbjct: 190 IPKERRTYLFSATMTTKVAKLQRACLKNPVKVEVSAKYSTVDSLKQEYLFIPAKYKDCYL 249
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
VYIL E++ ++ MVFTRTC+ATR L+L+LRNLG AIPISG MSQ KRLGAL KFKAG+C
Sbjct: 250 VYILNELAGNTAMVFTRTCEATRKLSLVLRNLGFVAIPISGQMSQPKRLGALAKFKAGDC 309
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NILICTDVASRGLDIPSV++VINYDIPTNSKDYIHRVGRTARAGR+G AIS+V QY++E
Sbjct: 310 NILICTDVASRGLDIPSVNLVINYDIPTNSKDYIHRVGRTARAGRSGRAISMVCQYDVEL 369
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
Y +IE+LIGKKLPEF ++EEVLL+LERV+EA+R++ M +++ ++ K
Sbjct: 370 YQKIEELIGKKLPEFSHQQEEVLLMLERVSEAQRLATMHMREKDGAKKGK 419
>gi|242042443|ref|XP_002468616.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
gi|241922470|gb|EER95614.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
Length = 454
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 291/419 (69%), Positives = 355/419 (84%), Gaps = 4/419 (0%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
++ TF ELG+ ELVEAC+ +GWK P++IQAEAIPHAL+GKDLI LAQTGSGKTGAFAL
Sbjct: 21 RQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGAFAL 80
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ LL N++ +FFACVLSPTRELAIQI+EQFEALGS I LRC+VLVGGVD +Q
Sbjct: 81 PILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVDRVQ 137
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L++GKRPHIVV TPGRL+DHLT TKGFSL +KYLVLDEAD+LLN +FEKSLD+IL
Sbjct: 138 QVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDILRE 197
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IP+ R+T+LFSATMTKKV KLQRACL+NP K+EAASKYSTVD+LKQ++ FVPA KDCYL
Sbjct: 198 IPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEAASKYSTVDSLKQEFYFVPADDKDCYL 257
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+++L E S M+F RTC++TRLLALMLRNLG +A+ ISG MSQ KRLGALN+FKA +C
Sbjct: 258 LHVLNERQDSMIMIFVRTCESTRLLALMLRNLGLKAMSISGQMSQDKRLGALNRFKAKDC 317
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRTARAGR+G A+SLVNQYE +W
Sbjct: 318 NILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAVSLVNQYEAQW 377
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS-GNKRRRKGGDEDDDI 422
++ IEKL+GK++ + + +EV++L +++AKRI+ +KDS G+K+RRK GD+D+++
Sbjct: 378 FVLIEKLLGKQIDQRKVDRDEVMILKGPISDAKRIALTKLKDSGGHKKRRKAGDDDEEV 436
>gi|212722850|ref|NP_001131651.1| uncharacterized protein LOC100193011 [Zea mays]
gi|194692160|gb|ACF80164.1| unknown [Zea mays]
gi|413934956|gb|AFW69507.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 455
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/422 (68%), Positives = 355/422 (84%), Gaps = 4/422 (0%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A ++ TF ELG+ ELVEAC+ +GWK P++IQAEAIPHAL+GKDLI LAQTGSGKTGA
Sbjct: 18 AAARQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEALGS I LRC+VLVGGVD
Sbjct: 78 FALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVD 134
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
+QQ L++GKRPHIVV TPGRL+DHLT TKGFSL +KYLVLDEAD+LLN +FEKSLD+I
Sbjct: 135 RVQQVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDI 194
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYSTVD+LKQ++ FVPA KD
Sbjct: 195 LSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYSTVDSLKQEFYFVPADDKD 254
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CYL+++L E S M+F RTC++TRLLALMLRNLG +A+ ISG MSQ KRLGALN+FKA
Sbjct: 255 CYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSISGQMSQDKRLGALNRFKA 314
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRTARAGR+G A+SLVNQYE
Sbjct: 315 KDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAVSLVNQYE 374
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS-GNKRRRKGGDEDD 420
+W++ IE+L+GKK+ + + +EVL+L +++AKRI+ +KDS G+K+RR GD+D+
Sbjct: 375 AQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKLKDSGGHKKRRNVGDDDE 434
Query: 421 DI 422
++
Sbjct: 435 EV 436
>gi|195621064|gb|ACG32362.1| ATP-dependent RNA helicase DDX47 [Zea mays]
Length = 455
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/419 (68%), Positives = 354/419 (84%), Gaps = 4/419 (0%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
++ TF ELG+ ELVEAC+ +GWK P++IQAEAIPHAL+GKDLI LAQTGSGKTGAFAL
Sbjct: 21 RQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGAFAL 80
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ LL N++ +FFACVLSPTRELAIQI+EQFEALGS I LRC+VLVGGVD +Q
Sbjct: 81 PILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVDRVQ 137
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L++GKRPHIVV TPGRL+DHLT TKGFSL +KYLVLDEAD+LLN +FEKSLD+IL+
Sbjct: 138 QVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDILSE 197
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYSTVD+LKQ++ FVPA KDCYL
Sbjct: 198 MPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYSTVDSLKQEFYFVPADDKDCYL 257
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+++L E S M+F RTC++TRLLALMLRNLG +A+ ISG MSQ KRLGALN+FKA +C
Sbjct: 258 LHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSISGQMSQDKRLGALNRFKAKDC 317
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRTARAGR+G A+SLVNQYE +W
Sbjct: 318 NILICTDVASRGLDIQGVDMVINYDIPINSKDYVHRVGRTARAGRSGYAVSLVNQYEAQW 377
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS-GNKRRRKGGDEDDDI 422
++ IE+L+GKK+ + + +EVL+L +++AKRI+ +KDS G+K+RR GD+D+++
Sbjct: 378 FVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKLKDSGGHKKRRNVGDDDEEV 436
>gi|3775997|emb|CAA09201.1| RNA helicase [Arabidopsis thaliana]
Length = 376
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/363 (77%), Positives = 329/363 (90%), Gaps = 2/363 (0%)
Query: 75 ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPH 134
+ +R PAFFACVLSPTRELAIQI+EQFEALG+ ISLRCAVLVGG+D MQQT+ALGKRPH
Sbjct: 2 KGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH 61
Query: 135 IVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLF 194
++VATPGRL DH+++TKGFSL +LKYLVLDEADRLLN+DFEKSL++IL IP R+T+LF
Sbjct: 62 VIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLF 121
Query: 195 SATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS 254
SATMTKKV+KLQRACL+NPVKIEAASKYSTVDTLKQQYRFV AKYKDCYLVYIL+E+ S
Sbjct: 122 SATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPES 181
Query: 255 STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVAS 314
++M+FTRTCD TR LAL+LR+LG RAIPISG M+QSKRLGALNKFKAGECNIL+CTDVAS
Sbjct: 182 TSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVAS 241
Query: 315 RGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGK 374
RGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+GV ISLVNQYELEWY+QIEKLIGK
Sbjct: 242 RGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGK 301
Query: 375 KLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLS 434
KLPE+PAEE+EVL LLERV EAK++S M +K+SG ++RR G++D++ R G NK + +
Sbjct: 302 KLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR--GEDDEESERFLGGNKDRGN 359
Query: 435 KRK 437
K +
Sbjct: 360 KER 362
>gi|302823844|ref|XP_002993570.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
gi|300138582|gb|EFJ05345.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
Length = 434
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/440 (67%), Positives = 359/440 (81%), Gaps = 9/440 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
MA V +F ELG+R+ELV+AC +GWK P+ IQ EA+P AL+G+DLIGLAQTGSGKT
Sbjct: 1 MAAAAAVPSFGELGVREELVDACTKLGWKAPTPIQVEALPLALQGRDLIGLAQTGSGKTA 60
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPILQAL Q+ P FFACVLSPTRELAIQISEQFEALGS I +R +VGGV
Sbjct: 61 AFALPILQALF-----QQCHP-FFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGV 114
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
M+ Q +ALGK PHIVVATPGRL+DHLTNTKGFSL +KYLVLDEAD++L++DFEK +DE
Sbjct: 115 SMVDQAVALGKNPHIVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDE 174
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL V+PR R+T+LFSATMT KV KLQRACL+NP K+E +SKY+T TLKQ+Y FVPAK+K
Sbjct: 175 ILKVVPRERKTFLFSATMTNKVAKLQRACLRNPTKVEVSSKYTTALTLKQEYVFVPAKHK 234
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
DCY V++L E++ S+ MVFTRTCD+TR LAL+LR+LG AIPISG MSQSKR GAL KFK
Sbjct: 235 DCYFVFLLNEMAGSTAMVFTRTCDSTRRLALILRSLGFGAIPISGQMSQSKRSGALLKFK 294
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG+ N+LICTDVASRGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+G AIS+V QY
Sbjct: 295 AGDRNLLICTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGRAISIVTQY 354
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD---SGNKRRRKGGD 417
+++ Y +IE LIG LPEFPA+ +EVLLL ERV+EA+R++ M I++ S ++R+ GD
Sbjct: 355 DVDLYKRIEDLIGMTLPEFPAKADEVLLLEERVSEAQRLAAMHIREKDASKKSKKRRNGD 414
Query: 418 EDDDIGRQFGINKKKLSKRK 437
+D+ + K+K SK++
Sbjct: 415 DDEADDGGYMAGKRKQSKKR 434
>gi|224137340|ref|XP_002322533.1| predicted protein [Populus trichocarpa]
gi|222867163|gb|EEF04294.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 298/443 (67%), Positives = 363/443 (81%), Gaps = 7/443 (1%)
Query: 1 MAEEKEV--KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGK 58
MAE+K+ KTF +LGL ELVEACEN+GWK P+KIQ EAIP+AL+GKDLIG+A TGSGK
Sbjct: 1 MAEDKQETEKTFADLGLCKELVEACENLGWKKPTKIQEEAIPYALQGKDLIGVAATGSGK 60
Query: 59 TGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
TGAF LP L+A+L+ ++ +++V FF CVLSPTRELAIQI+EQFEALGSGI +RC VLVG
Sbjct: 61 TGAFVLPTLEAILKDSQERKSVQPFFVCVLSPTRELAIQIAEQFEALGSGIGVRCVVLVG 120
Query: 119 GVDMMQQTLALGK-RPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKS 177
G DM+QQ++ L K RPH++V TPGRL DHL+NTKGFSL LKYL+LDEADRLL+ DFEKS
Sbjct: 121 GEDMLQQSIVLAKKRPHVIVGTPGRLADHLSNTKGFSLHALKYLILDEADRLLSMDFEKS 180
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
LDEIL IPR R+TYLFSATMT K KLQRACL+NPVKIEAA KYS VDTL+Q + F+PA
Sbjct: 181 LDEILKAIPRNRRTYLFSATMTNKAGKLQRACLRNPVKIEAAFKYSIVDTLEQGFYFMPA 240
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
KDCYLV++L+ +++MVFTRTC T LAL+LR LG AIPI+G MSQS RLGALN
Sbjct: 241 ALKDCYLVHVLSSKKGATSMVFTRTCRETDFLALVLRKLGLGAIPINGQMSQSNRLGALN 300
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
KFKAGE NILICTDVASRGLDI SVD+V+NY+IPTN+KDY HRVGRTARAGR+G+AISLV
Sbjct: 301 KFKAGEFNILICTDVASRGLDILSVDVVVNYNIPTNAKDYFHRVGRTARAGRSGLAISLV 360
Query: 358 NQYELEWYLQIEKLIGK--KLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR--R 413
NQ+++ + QIEK IG K+P++ A E+EVLLL ERVTEAKRIS+ +I++ G +R R
Sbjct: 361 NQFDIGPFKQIEKHIGDDFKIPKYTANEDEVLLLAERVTEAKRISRKSIQEGGGNKRTDR 420
Query: 414 KGGDEDDDIGRQFGINKKKLSKR 436
++++DI + GI KKL ++
Sbjct: 421 LDDEDEEDIEKYLGIKNKKLRRK 443
>gi|326504546|dbj|BAJ91105.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508600|dbj|BAJ95822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 456
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/410 (68%), Positives = 343/410 (83%), Gaps = 7/410 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E TF ELG+ ELVEAC+ +GWK P+KIQA AIPHAL+G+D+IGL QTGSGKTGAFALP
Sbjct: 24 EASTFAELGICRELVEACDAMGWKQPTKIQAGAIPHALQGRDVIGLGQTGSGKTGAFALP 83
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
I+QALLE + FFACV+SPTRELAIQI+EQFEALGSGI L C+VLVGGVD MQQ
Sbjct: 84 IIQALLEHRQ------PFFACVMSPTRELAIQIAEQFEALGSGIGLVCSVLVGGVDRMQQ 137
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L++ KRPHIVV TPGRL+DHL +TKGFSL +KYLVLDEAD+LLN +F++SLD+IL I
Sbjct: 138 VLSIAKRPHIVVGTPGRLLDHLKDTKGFSLTKVKYLVLDEADKLLNLEFKESLDDILKEI 197
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R+TYLFSATMTKKV KLQRACL+NPVK+E +SKYSTVDTLKQ++ FVPA YKDCYLV
Sbjct: 198 PKERRTYLFSATMTKKVSKLQRACLRNPVKVEVSSKYSTVDTLKQEWYFVPADYKDCYLV 257
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L E+ S M+F RTC++TRLLAL LRNLG +A+ ISG MSQ KRLGALNKFKA + N
Sbjct: 258 HVLNELQGSMIMIFVRTCESTRLLALTLRNLGFKALSISGQMSQDKRLGALNKFKAKDFN 317
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
ILICTDVASRGLDI VD+V+NYDIP NSKDY+HRVGRTARAG++G A+S VNQYE EW+
Sbjct: 318 ILICTDVASRGLDIQGVDVVMNYDIPMNSKDYVHRVGRTARAGQSGYAVSFVNQYEAEWF 377
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK-DSGNKRRRK 414
IE+L+G+++P+ + +E+L+L E ++++KRI+ +K D G+K+RRK
Sbjct: 378 KLIEQLLGRQIPDRKVDMDEILILREHISDSKRIALTKLKEDGGHKKRRK 427
>gi|357116154|ref|XP_003559848.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 449
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/416 (68%), Positives = 344/416 (82%), Gaps = 9/416 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELG+ ELV+AC+ +GWK P+KIQA AIPHAL+G+DLIGL QTGSGKTGAFALPI+Q
Sbjct: 19 TFAELGICRELVDACDAMGWKEPTKIQAGAIPHALQGRDLIGLGQTGSGKTGAFALPIIQ 78
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE ++R FFACV+SPTRELAIQI+EQFEALGS I L C+VLVGGVD MQQ L+
Sbjct: 79 ALLE---HRR---PFFACVMSPTRELAIQIAEQFEALGSAIGLVCSVLVGGVDRMQQVLS 132
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ KRPHIVV TPGRL+DHL +TKGFSL +KYLVLDEAD+LLN +F++SLD+IL IP+
Sbjct: 133 IAKRPHIVVGTPGRLLDHLKDTKGFSLNKVKYLVLDEADKLLNLEFKESLDDILKAIPKE 192
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+TYLFSATMTKKV KLQRACL+NP K+E +SKYSTVDTLKQ++ FVPA YKDCYLV+ L
Sbjct: 193 RRTYLFSATMTKKVSKLQRACLRNPAKVEVSSKYSTVDTLKQEWYFVPAAYKDCYLVHAL 252
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E+ S M+F RTC++TRLLAL LRNLG +A+ ISG MSQ KRLGALNKFKA + NILI
Sbjct: 253 NELPGSMIMIFVRTCESTRLLALTLRNLGFKALSISGQMSQDKRLGALNKFKAKDFNILI 312
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
CTDVASRGLDI VD VINYDIP NSKDYIHRVGRTARAG++G A+SLVNQYE EW+ I
Sbjct: 313 CTDVASRGLDIQGVDAVINYDIPMNSKDYIHRVGRTARAGKSGYAVSLVNQYETEWFKMI 372
Query: 369 EKLIGKKLPE-FPAEEEEVLLLLERVTEAKRISQMTIKDSGN--KRRRKGGDEDDD 421
E L+GKK+ + + +E+++L E +++++RI+ +K+ G KRRRKG D+DDD
Sbjct: 373 EALLGKKIGDPRKVDADEIMILREHISDSRRIALTKLKEDGGSKKRRRKGNDDDDD 428
>gi|115454521|ref|NP_001050861.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|75327677|sp|Q7Y183.1|RH10_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|31126733|gb|AAP44655.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|53370642|gb|AAU89137.1| DEAD/DEAH box helicase domain containing protein [Oryza sativa
Japonica Group]
gi|108710302|gb|ABF98097.1| ATP-dependent RNA helicase DDX47, putative, expressed [Oryza sativa
Japonica Group]
gi|113549332|dbj|BAF12775.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|125545183|gb|EAY91322.1| hypothetical protein OsI_12939 [Oryza sativa Indica Group]
gi|215695397|dbj|BAG90588.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/431 (66%), Positives = 350/431 (81%), Gaps = 6/431 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELG+ ELV AC+ +GWK P++IQAEAIPHALEG+DLIGL QTGSGKTGAFALPI+Q
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALL+ + Q A FACVLSPTRELA QI +QFEALGS I L C VLVGGVD +QQ ++
Sbjct: 102 ALLKQDKPQ----ALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVS 157
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVV TPGRL+DHLT+TKGFSL LKYLVLDEAD+LLN +F+K+LD+ILNVIP+
Sbjct: 158 LAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKE 217
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMT KV KLQRACL+NPVK+E ASKYSTVDTL+Q++ FVPA YKDC+LV++L
Sbjct: 218 RRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVL 277
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E+ S M+F RTC++TRLLAL LRNL +AI ISG MSQ KRLGALN+FK +CNILI
Sbjct: 278 NELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILI 337
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
CTDVASRGLDI VD+VINYDIP NSKDY+HRVGRTARAG TG A+SLVNQYE W+ I
Sbjct: 338 CTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMI 397
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN--KRRRKGGDEDDDIGRQF 426
EKL+G ++P+ + E+++L ER++++KRI+ T+K+ G K+RRK D++++ R
Sbjct: 398 EKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEERNA 457
Query: 427 GINKKKLSKRK 437
+++K S K
Sbjct: 458 PVSRKSKSFNK 468
>gi|125587400|gb|EAZ28064.1| hypothetical protein OsJ_12029 [Oryza sativa Japonica Group]
Length = 472
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 284/431 (65%), Positives = 349/431 (80%), Gaps = 6/431 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELG+ ELV AC+ +GWK P++IQAEAIPHALEG+DLIGL QTGSGKTGAF LPI+Q
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFGLPIIQ 101
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALL+ + Q A FACVLSPTRELA QI +QFEALGS I L C VLVGGVD +QQ ++
Sbjct: 102 ALLKQDKPQ----ALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVS 157
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVV TPGRL+DHLT+TKGFSL LKYLVLDEAD+LLN +F+K+LD+ILNVIP+
Sbjct: 158 LAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKE 217
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMT KV KLQRACL+NPVK+E ASKYSTVDTL+Q++ FVPA YKDC+LV++L
Sbjct: 218 RRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVL 277
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E+ S M+F RTC++TRLLAL LRNL +AI ISG MSQ KRLGALN+FK +CNILI
Sbjct: 278 NELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILI 337
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
CTDVASRGLDI VD+VINYDIP NSKDY+HRVGRTARAG TG A+SLVNQYE W+ I
Sbjct: 338 CTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMI 397
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN--KRRRKGGDEDDDIGRQF 426
EKL+G ++P+ + E+++L ER++++KRI+ T+K+ G K+RRK D++++ R
Sbjct: 398 EKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEERNA 457
Query: 427 GINKKKLSKRK 437
+++K S K
Sbjct: 458 PVSRKSKSFNK 468
>gi|357121637|ref|XP_003562524.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 447
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/407 (68%), Positives = 339/407 (83%), Gaps = 7/407 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELG+ ELV+AC+++GWK P+KIQA AIPHAL+G+DLIGL QTGSGKTGAFALPI+Q
Sbjct: 19 TFAELGICKELVDACDSMGWKEPTKIQAGAIPHALQGRDLIGLGQTGSGKTGAFALPIIQ 78
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE + FFACV+SPTRELAIQI+EQFEALGS I L C+VLVGGVD MQQ L+
Sbjct: 79 ALLEHRQ------PFFACVMSPTRELAIQIAEQFEALGSAIGLVCSVLVGGVDRMQQVLS 132
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ KRPHIVV TPGRL+DHL +TKGFSL +KYLVLDEAD+LLN +F++SLD+IL IP+
Sbjct: 133 IAKRPHIVVGTPGRLLDHLKDTKGFSLNKVKYLVLDEADKLLNLEFKESLDDILKAIPKE 192
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+TYLFSATMTKKV KLQRACL+NPVK+E +SKYSTVDTLKQ++ FVPA YKDCYLV+ L
Sbjct: 193 RRTYLFSATMTKKVAKLQRACLRNPVKVEVSSKYSTVDTLKQEWYFVPAAYKDCYLVHAL 252
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E+ S M+F RTC++TRLLAL LRNLG +A+ ISG MSQ KRLGALNKFKA + NILI
Sbjct: 253 NELPGSMIMIFVRTCESTRLLALTLRNLGFKALSISGQMSQDKRLGALNKFKAKDFNILI 312
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
CTDVASRGLDI VD+VINYDIP NSKDY+HRVGRTARAG++G A+SLVNQYE +W+ I
Sbjct: 313 CTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGKSGYAVSLVNQYEGQWFKMI 372
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK-DSGNKRRRK 414
E L+GK++ + +E+++L E +++++RI+ +K D G+K+RRK
Sbjct: 373 EALLGKEIDLRKVDSDEIMILREHISDSRRIALTKLKEDGGHKKRRK 419
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/442 (63%), Positives = 352/442 (79%), Gaps = 12/442 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 18 AEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 78 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 131
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 132 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 191
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 192 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 251
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 252 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 311
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY+
Sbjct: 312 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 371
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--ED 419
+E + +IE LIGKKLP FP ++EEV++L ERV+EA+R ++M +++ G K++RK D +D
Sbjct: 372 VELFQRIEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMELREHGEKKKRKREDPGDD 431
Query: 420 DDIGRQFGINKK----KLSKRK 437
DD G+ K K+ KRK
Sbjct: 432 DDTEGAIGVRNKVAGGKMKKRK 453
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/420 (65%), Positives = 344/420 (81%), Gaps = 9/420 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E VKTFK+LG+ D L EAC+ +GWK+P+KIQ EAIP AL+GKD+IGLA+TGSGKTGAFA
Sbjct: 35 EAAVKTFKDLGVTDVLCEACDQLGWKSPTKIQVEAIPVALQGKDVIGLAETGSGKTGAFA 94
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ+LL A QR VL+PTRELA QISEQFEALGS I ++CAV+VGG+DMM
Sbjct: 95 LPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMM 148
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+L L K+PHIV+ATPGRL+DH+ NTKGFSL LK+LV+DEADR+LN DFE +D+IL
Sbjct: 149 SQSLVLAKKPHIVIATPGRLIDHMENTKGFSLRALKFLVMDEADRILNMDFETEVDKILK 208
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK ++KYSTVD L+Q Y F+PAKYKDCY
Sbjct: 209 VIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYSTVDKLQQYYVFIPAKYKDCY 268
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LV IL E++ +S M+F TC+ + +ALMLRNLG AIP+ G MSQ+KRLGALNKFK+
Sbjct: 269 LVSILNELAGNSFMIFCSTCNNAQRVALMLRNLGITAIPLHGQMSQNKRLGALNKFKSKS 328
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E
Sbjct: 329 RSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVE 388
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDEDD 420
+ +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +K+ G KR+R + GDEDD
Sbjct: 389 LFQRIESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARVEMKEQGEKRKRPRGRDGDEDD 448
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/424 (65%), Positives = 348/424 (82%), Gaps = 11/424 (2%)
Query: 3 EEKEVK-TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
E+K+ K F +G+ +EL EA ++GWK PS+IQA++IP AL+GKD+IGLAQTGSGKTGA
Sbjct: 9 EKKKAKEAFLGIGVCEELAEAAADLGWKAPSEIQAQSIPQALQGKDVIGLAQTGSGKTGA 68
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ LL+ + AFFA VLSPTRELAIQI+EQFEALG+GI ++ AVLVGG+D
Sbjct: 69 FALPILQELLDKPQ------AFFALVLSPTRELAIQIAEQFEALGAGIGVKTAVLVGGID 122
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
MM Q++ LGKRPH+VV TPGR++DHLTNTKGF+L L+ L LDEADRLLN DFE+ +D+I
Sbjct: 123 MMAQSIQLGKRPHVVVGTPGRVVDHLTNTKGFTLKQLQVLCLDEADRLLNLDFEQEIDQI 182
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+PR R+T LFSATMT KV KLQRACL+NPVK+E ++KYSTVD+LKQ Y F+PAK+KD
Sbjct: 183 LKVVPRDRRTQLFSATMTSKVAKLQRACLRNPVKVEVSAKYSTVDSLKQNYLFIPAKHKD 242
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CY+ Y+ E+S+S+ MVFTRTCD TR LAL+ RNLG AIPI G MSQ KR+GALNKFKA
Sbjct: 243 CYVNYLFNELSSSTMMVFTRTCDQTRKLALVARNLGFGAIPIHGQMSQPKRIGALNKFKA 302
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
GE NIL+ TDVASRGLDIP+VD+VINYD+P NSKDY+HRVGRTARAGR+G+AI++V QY+
Sbjct: 303 GERNILVATDVASRGLDIPAVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAITMVTQYD 362
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS----GNKRRRKGGD 417
+E Y +IE+LI KKL + A EE VLL+ ERV EA+RI+Q ++++ G K+R + GD
Sbjct: 363 VELYQKIERLIQKKLDAYDAPEEAVLLMNERVNEAQRIAQQQMREADAKGGGKKRNRDGD 422
Query: 418 EDDD 421
++D
Sbjct: 423 GEED 426
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/442 (63%), Positives = 352/442 (79%), Gaps = 12/442 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 18 AEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 78 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 131
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 132 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 191
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 192 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 251
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 252 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 311
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY+
Sbjct: 312 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 371
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDE 418
+E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +++ G K++RK GD+
Sbjct: 372 VELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHGEKKKRKREDAGDD 431
Query: 419 DDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 432 DDKEGAIGVRNKVAGGKMKKRK 453
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/441 (63%), Positives = 350/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E E KTFK+LG+ D L +AC+ +GWKTP+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 20 EVPETKTFKDLGVTDVLCDACDQLGWKTPTKIQIEAIPMALDGRDIIGLAETGSGKTGAF 79
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALL+ + FFA VL+PTRELA QISEQFEALGS I + CAV+VGG+D
Sbjct: 80 ALPILNALLDTPQR------FFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDS 133
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 134 MSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 193
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+IPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 194 KLIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDS 253
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S MVF TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA
Sbjct: 254 YLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAK 313
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++
Sbjct: 314 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDV 373
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR--RKGGDEDD 420
E Y +IE LIGKKLP FP +EEEV+LL ERV EA+R ++M +++ G KR+ R+ D++D
Sbjct: 374 ELYQRIEHLIGKKLPAFPTQEEEVMLLTERVAEAQRFARMEMREQGEKRKRFREDKDDND 433
Query: 421 DIGRQFGINKK----KLSKRK 437
D G+ K K+ KRK
Sbjct: 434 DTENATGVRNKVTGGKMKKRK 454
>gi|303283774|ref|XP_003061178.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457529|gb|EEH54828.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 456
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/412 (67%), Positives = 335/412 (81%), Gaps = 11/412 (2%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
V+ F LG+ +EL A ++GWK PS+IQ +IP AL+GKD+IGLAQTGSGKTGAFALPI
Sbjct: 14 VEAFTVLGVCEELATAAADLGWKDPSEIQRASIPQALQGKDVIGLAQTGSGKTGAFALPI 73
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LQ LL+ + AFFA VLSPTRELAIQISEQFEALG+GI ++CAVLVGGVDMM Q+
Sbjct: 74 LQELLDKPQ------AFFALVLSPTRELAIQISEQFEALGAGIGVKCAVLVGGVDMMAQS 127
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ LGKRPH+VV TPGR++DHLTNTKGF L L+ L LDEADRLLN DFE+ +D+IL VIP
Sbjct: 128 IQLGKRPHVVVGTPGRVVDHLTNTKGFGLKQLQVLCLDEADRLLNLDFEQEIDQILKVIP 187
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R R+T LFSATMT KV KLQRACL+NPVK+E ++KYSTV +LKQQY FVPAK+KDCY Y
Sbjct: 188 RDRRTQLFSATMTSKVAKLQRACLRNPVKVEVSAKYSTVASLKQQYLFVPAKHKDCYACY 247
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+ E+SAS+ MVFTRTCD TR LAL+ RNLG AIPI G MSQ KRLGALNKFKAGE N+
Sbjct: 248 LFNELSASTMMVFTRTCDQTRKLALVARNLGFGAIPIHGQMSQPKRLGALNKFKAGERNV 307
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVASRGLDIP+VD+VIN+D+P NSKDY+HRVGRTARAGR+G+AI+LV QY++E Y
Sbjct: 308 LVATDVASRGLDIPAVDVVINFDVPQNSKDYVHRVGRTARAGRSGLAITLVTQYDVELYQ 367
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS-----GNKRRR 413
+IE+LI KKL +PA EE VLL+ ERV EA+RI+ I+++ G KR R
Sbjct: 368 KIERLINKKLDAYPAPEEAVLLMHERVNEAQRIALQQIREADEKGGGKKRNR 419
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/425 (64%), Positives = 343/425 (80%), Gaps = 9/425 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 17 AEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPMALQGRDIIGLAETGSGKTGA 76
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 77 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 130
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 131 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 190
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 191 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 250
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 251 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 310
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY+
Sbjct: 311 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 370
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDE 418
+E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD
Sbjct: 371 VELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDAGDN 430
Query: 419 DDDIG 423
DD G
Sbjct: 431 DDTEG 435
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/412 (65%), Positives = 338/412 (82%), Gaps = 6/412 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AE +E KTFK+LG+ + L +AC+ +GWKTP+KIQ EAIP ALEG+D+IGLA+TGSGKTGA
Sbjct: 19 AEVQETKTFKDLGVTEVLCDACDQLGWKTPTKIQIEAIPMALEGRDIIGLAETGSGKTGA 78
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FFA VL+PTRELA QISEQFEALGS I + CAV+VGG+D
Sbjct: 79 FALPILNALLETPQR------FFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGID 132
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 133 SMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 192
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L +IPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 LKLIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 252
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S MVF TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA
Sbjct: 253 SYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKA 312
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY+
Sbjct: 313 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYD 372
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
+E Y +IE LIGKKLP FP +EEEV+LL ERV EA+R ++M +++ G KR+R
Sbjct: 373 VELYQRIEHLIGKKLPAFPTQEEEVMLLTERVAEAQRFARMEMREQGEKRKR 424
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/438 (63%), Positives = 349/438 (79%), Gaps = 10/438 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+E KTF++LG+ D L EACE +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 15 EEEPKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFA 74
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ LLE + +A VL+PTRELA QISEQFEALGS I ++ AV+VGG+DMM
Sbjct: 75 LPILQTLLESPQR------LYALVLTPTRELAFQISEQFEALGSSIGVKSAVIVGGIDMM 128
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L +KYLV+DEADR+LN DFE +D+IL
Sbjct: 129 SQSLALAKKPHIVIATPGRLIDHLENTKGFNLRAIKYLVMDEADRILNMDFETEVDKILK 188
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD Y
Sbjct: 189 VIPRDRKTFLFSATMTKKVHKLQRAALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKDSY 248
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+ G M Q+KRLGALNKFKA
Sbjct: 249 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMGQNKRLGALNKFKAKS 308
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V+QY++E
Sbjct: 309 RSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVSQYDVE 368
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIG 423
+ +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +++ G K++R D DDD
Sbjct: 369 LFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIELREHGEKKKRPRNDADDDKE 428
Query: 424 RQFGINKK----KLSKRK 437
G+ KK K K+K
Sbjct: 429 GSLGVRKKVTGGKFKKKK 446
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/443 (62%), Positives = 350/443 (79%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A E +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKESSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/441 (63%), Positives = 349/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 21 EVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 80
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 81 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDS 134
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 135 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 194
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 195 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 254
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 255 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 314
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 315 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 374
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 375 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDAGDND 434
Query: 420 DD---IGRQFGINKKKLSKRK 437
D IG + + K+ KRK
Sbjct: 435 DTEGAIGVRNKVAGGKMKKRK 455
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/441 (62%), Positives = 349/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 21 EVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 80
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 81 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDS 134
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 135 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 194
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 195 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 254
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 255 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 314
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 315 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 374
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R D ++D
Sbjct: 375 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDVGDND 434
Query: 421 DIGRQFGINKK----KLSKRK 437
D G+ K K+ KRK
Sbjct: 435 DTEGAIGVRNKVAGGKMKKRK 455
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/420 (64%), Positives = 344/420 (81%), Gaps = 6/420 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A E + TFK LG+ D L EAC+ +GWKTPSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 8 AIEDDKTTFKSLGVVDALCEACKQLGWKTPSKIQREAIPVALQGKDVIGLAETGSGKTGA 67
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALL+ QR FA +L+PTRELA QISEQ EALGSGI ++CAV+VGG+D
Sbjct: 68 FALPILQALLD--NPQR----LFALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGID 121
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
MM Q L L K+PHI++ATPGRL+DHL NTKGFSL TLKYLV+DEADR+LN DFEK +D++
Sbjct: 122 MMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRILNMDFEKEVDKL 181
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIP+ R+T+LFSATMTKKV+KLQRA L+ PVK+E A+KY TV+ L+Q Y F+P+K+KD
Sbjct: 182 LKVIPKERRTFLFSATMTKKVQKLQRASLQAPVKVEVATKYQTVEKLQQSYLFIPSKFKD 241
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CYLVY+L E++ +S MVF TC+ + + LMLRNLG A+P+ G MSQSKRLGALNKFK+
Sbjct: 242 CYLVYVLNELAGNSFMVFCGTCNNVQRVTLMLRNLGLDAVPLHGQMSQSKRLGALNKFKS 301
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +++ V QY+
Sbjct: 302 KSRSILVATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRSVTFVTQYD 361
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
+E Y +IE LI KKLP++P EEEV+LL+ERVTEA+R ++M +++ +K++R D+ D+
Sbjct: 362 VELYQRIEHLIAKKLPQYPTVEEEVMLLMERVTEAQRYARMELREINDKKKRAPEDDLDE 421
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/441 (62%), Positives = 350/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 QEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
E + +IE LIGKKLP FP +E+EV++L ERVTEA+R ++M +++ G K++R D ++D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQEDEVMMLTERVTEAQRFARMELREHGEKKKRTREDAGDND 432
Query: 421 DIGRQFGINKK----KLSKRK 437
D+ G+ K K+ KRK
Sbjct: 433 DMEGAMGVRNKVAGGKMKKRK 453
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/440 (62%), Positives = 350/440 (79%), Gaps = 12/440 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 19 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFA 78
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPIL ALL+ + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D M
Sbjct: 79 LPILNALLDTPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSM 132
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 SQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 192
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD Y
Sbjct: 193 VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTY 252
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 LVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKA 312
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E
Sbjct: 313 RSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVE 372
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDDD 421
+ +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R D ++DD
Sbjct: 373 LFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDAGDNDD 432
Query: 422 IGRQFGINKK----KLSKRK 437
+ G+ K K+ KRK
Sbjct: 433 MEGAIGVRNKVAGGKMKKRK 452
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/441 (62%), Positives = 349/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 21 EVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 80
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 81 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDS 134
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 135 MSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 194
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 195 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 254
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 255 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 314
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 315 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 374
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 375 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDTGDND 434
Query: 420 DD---IGRQFGINKKKLSKRK 437
D IG + + K+ KRK
Sbjct: 435 DTEGAIGVRNKVAGGKMKKRK 455
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/441 (62%), Positives = 349/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R D ++D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDVGDND 432
Query: 421 DIGRQFGINKK----KLSKRK 437
D G+ K K+ KRK
Sbjct: 433 DTEGALGVRNKVAGGKMKKRK 453
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/436 (63%), Positives = 347/436 (79%), Gaps = 12/436 (2%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D M Q++
Sbjct: 84 NALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSI 137
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR
Sbjct: 138 ALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYI
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYI 257
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA +IL
Sbjct: 258 LNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSIL 317
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E + +
Sbjct: 318 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 377
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDDDIGRQ 425
IE LIGKKLP FP ++EEV++L ERV+EA+R ++M +++ G K++RK D +DDD
Sbjct: 378 IEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMELREHGEKKKRKREDAGDDDDTEGA 437
Query: 426 FGINKK----KLSKRK 437
G+ K K+ KRK
Sbjct: 438 MGVRNKVAGGKMKKRK 453
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVTGGKMKKRK 453
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/444 (62%), Positives = 349/444 (78%), Gaps = 14/444 (3%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 MVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEYLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDDIGRQFGINKK----KLSKRK 437
DD G G+ K K+ KRK
Sbjct: 431 NDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/431 (63%), Positives = 349/431 (80%), Gaps = 8/431 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E KTFK+LG+ + L EAC+ +GWK+P+KIQ EA+P AL+GKD+IGLA+TGSGKTGAF
Sbjct: 33 DEDTPKTFKDLGVTEVLCEACDQLGWKSPTKIQIEAVPVALQGKDVIGLAETGSGKTGAF 92
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LL A QR VL+PTRELA QISEQFEALGS I ++CAV+VGG+DM
Sbjct: 93 ALPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDM 146
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+L L K+PHIV+ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE +D+IL
Sbjct: 147 MSQSLVLAKKPHIVIATPGRLIDHLENTKGFTLRALKFLVMDEADRILNMDFETEVDKIL 206
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK ++KYSTVD L+Q Y F+P+KYKDC
Sbjct: 207 KVIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYSTVDKLQQYYIFIPSKYKDC 266
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLV IL +++ +S ++F TC+ + +AL+LRNLG AI + G MSQ+KRLGALNKFK+
Sbjct: 267 YLVSILNDLAGNSFIIFCSTCNNAQRVALLLRNLGITAISLHGQMSQNKRLGALNKFKSK 326
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRTARAGR+G +I+ V QY++
Sbjct: 327 SRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDV 386
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR-KGGDEDDD 421
E + +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +K+ G KR+R KGGD DDD
Sbjct: 387 ELFQRIESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARLEMKEQGEKRKRPKGGDRDDD 446
Query: 422 IGRQ-FGINKK 431
Q G+ KK
Sbjct: 447 DTEQSSGVRKK 457
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/441 (62%), Positives = 349/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEEAKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G M+QSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMNQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDAGDND 432
Query: 420 DD---IGRQFGINKKKLSKRK 437
D IG + + K+ KRK
Sbjct: 433 DTEGAIGVRNKVAGGKMKKRK 453
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/423 (64%), Positives = 347/423 (82%), Gaps = 7/423 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
++ VK+FK+LG+ + L EAC+ +GWK+P+KIQ EAIP AL+GKD+IGLA+TGSGKTGAFA
Sbjct: 33 DETVKSFKDLGVTEVLCEACDQLGWKSPTKIQIEAIPVALQGKDVIGLAETGSGKTGAFA 92
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ+LL A QR VL+PTRELA QISEQFEALGS I ++CAV+VGG+DMM
Sbjct: 93 LPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMM 146
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+L L K+PH+V+ATPGRL+DHL NTKGFSL LK+LV+DEADR+LN DFE +D+IL
Sbjct: 147 SQSLVLAKKPHVVIATPGRLIDHLENTKGFSLRALKFLVMDEADRILNMDFETEVDKILK 206
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KL+RA LK+PVK ++KYSTVD L+Q Y F+P+KYKDCY
Sbjct: 207 VIPRERRTFLFSATMTKKVQKLERAALKDPVKCAVSTKYSTVDKLQQYYIFIPSKYKDCY 266
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LV IL E++ +S ++F TC+ + +AL+LRNLG AIP+ G MSQ+KRLGALNKFK+
Sbjct: 267 LVSILNELAGNSFIIFCSTCNTAQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKS 326
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E
Sbjct: 327 RSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVE 386
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR-KGGDEDDDI 422
+ +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +K+ G+KR+R K GD DDD
Sbjct: 387 LFQRIETLIGKKLPAFPTQEEEVMMLVERVSEAQRFAKIEMKEQGDKRKRPKRGDGDDDD 446
Query: 423 GRQ 425
Q
Sbjct: 447 TEQ 449
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/441 (62%), Positives = 348/441 (78%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMELREHGEKKKRSREDAGDND 432
Query: 420 DD---IGRQFGINKKKLSKRK 437
D IG + + K+ KRK
Sbjct: 433 DTEGAIGVRNKVAGGKMKKRK 453
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 12 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 71
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 72 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 125
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 126 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 185
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 186 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 245
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 246 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 305
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 306 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 365
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 366 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 425
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 426 NDDTEGAIGVRNKVAGGKMKKRK 448
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/441 (62%), Positives = 348/441 (78%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMELREHGEKKKRSREDAGDND 432
Query: 420 DD---IGRQFGINKKKLSKRK 437
D IG + + K+ KRK
Sbjct: 433 DTEGAIGVRNKVAGGKMKKRK 453
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EA+P AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAVPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/441 (62%), Positives = 348/441 (78%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 25 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 84
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 85 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 138
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 139 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 198
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 199 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 258
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S MVF TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA
Sbjct: 259 YLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQTKRLGSLNKFKAK 318
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++
Sbjct: 319 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDV 378
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +++ G K++R GD D
Sbjct: 379 ELFQRIEHLIGKKLPVFPTQDEEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGDND 438
Query: 420 DD---IGRQFGINKKKLSKRK 437
D IG + + K+ KRK
Sbjct: 439 DTEGAIGVRNKVAGGKMKKRK 459
>gi|302822183|ref|XP_002992751.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
gi|300139492|gb|EFJ06232.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
Length = 733
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 284/429 (66%), Positives = 344/429 (80%), Gaps = 25/429 (5%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
V +F ELG+R+ELV+AC +GWK P+ IQ EA+P AL+G+DLIGLAQTGSGKT AFALPI
Sbjct: 173 VPSFGELGVREELVDACTKLGWKAPTPIQVEALPLALQGRDLIGLAQTGSGKTAAFALPI 232
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LQAL Q+ P FFACVLSPTRELAIQISEQFEALGS I +R +VGGV M+ Q
Sbjct: 233 LQALF-----QQCHP-FFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQA 286
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ALGK PHIVVATPGRL+DHLTNTKGFSL +KYLVLDEAD++L++DFEK +DEIL V+P
Sbjct: 287 VALGKNPHIVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEILKVVP 346
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R R+T+LFSATMT KV KLQRACL+NP K+E +SKY+T TLKQ+Y FVPAK+KDCY V+
Sbjct: 347 RERKTFLFSATMTNKVAKLQRACLRNPTKVEVSSKYTTALTLKQEYVFVPAKHKDCYFVF 406
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E++ S+ MVFTRTCD+TR LAL+LR+LG AIPISG MSQSKR GAL KFKAG+ N+
Sbjct: 407 LLNEMAGSTAMVFTRTCDSTRRLALILRSLGFGAIPISGQMSQSKRSGALLKFKAGDRNL 466
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LICTDVASRGLDIPSVD+ DYIHRVGRTARAGR+G AIS+V QY+++ Y
Sbjct: 467 LICTDVASRGLDIPSVDV-----------DYIHRVGRTARAGRSGRAISIVTQYDVDLYK 515
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD---SGNKRRRKGGDED--DD 421
+IE LIG LPEFPA+ +EVLLL ERV+EA+R++ M I++ S ++R+ GD+D DD
Sbjct: 516 RIEDLIGMTLPEFPAKADEVLLLEERVSEAQRLAAMHIREKDASKKSKKRRNGDDDEADD 575
Query: 422 I---GRQFG 427
+ GRQ G
Sbjct: 576 VLALGRQGG 584
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/442 (62%), Positives = 349/442 (78%), Gaps = 14/442 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 QEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYVFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRVREDTGDND 432
Query: 420 DDIGRQFGINKK----KLSKRK 437
D G G+ K K+ KRK
Sbjct: 433 DTEG-AMGVRNKVAGGKMKKRK 453
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/424 (64%), Positives = 341/424 (80%), Gaps = 9/424 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 QEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDAGDND 432
Query: 420 DDIG 423
D G
Sbjct: 433 DTEG 436
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 109 VVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 168
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 169 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 222
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 223 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 282
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 283 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 342
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 343 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 402
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 403 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 462
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 463 DVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRPREDAGD 522
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 523 NDDTEGAIGVRNKVAGGKMKKRK 545
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/442 (62%), Positives = 349/442 (78%), Gaps = 14/442 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYIFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDAGDND 432
Query: 420 DDIGRQFGINKK----KLSKRK 437
D G G+ K K+ KRK
Sbjct: 433 DTEG-AMGVRNKVAGGKMKKRK 453
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/445 (61%), Positives = 353/445 (79%), Gaps = 16/445 (3%)
Query: 3 EEKEV-----KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSG 57
E++EV K+FKELG+ + L EAC+ +GWKTP+KIQ E+IP AL+G+D+IGLA+TGSG
Sbjct: 6 EQEEVNAEAAKSFKELGVTEVLCEACDQLGWKTPTKIQVESIPLALQGRDIIGLAETGSG 65
Query: 58 KTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLV 117
KTGAFALPILQALLE + FFA VL+PTRELA QISEQFEALGS I ++ AV+V
Sbjct: 66 KTGAFALPILQALLETPQR------FFALVLTPTRELAFQISEQFEALGSSIGVQTAVIV 119
Query: 118 GGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKS 177
GG+DMM Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE
Sbjct: 120 GGIDMMAQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETE 179
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+
Sbjct: 180 VDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYVFIPS 239
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G M+Q+KRLG+LN
Sbjct: 240 KFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMNQNKRLGSLN 299
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
KFKA ++L+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V
Sbjct: 300 KFKAKARSVLLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFV 359
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR-RKGG 416
QY++E + +IE LIGKKLP FP +E+EV++L ERV EA+R ++M ++ G+K+R R+
Sbjct: 360 TQYDVELFQRIEHLIGKKLPAFPTQEDEVMMLTERVAEAQRFARMELQQKGDKKRSREEA 419
Query: 417 DEDDDIGRQFGINKK----KLSKRK 437
+E DD G+ K K KRK
Sbjct: 420 NEPDDAEGAMGVRNKVAGGKKKKRK 444
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ E++E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEKEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/443 (62%), Positives = 348/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TG GKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGPGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/443 (62%), Positives = 348/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 10 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 69
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 70 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 123
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 124 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 183
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL V PR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 184 ILKVNPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 243
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 244 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 303
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 304 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 363
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 364 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 423
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 424 NDDTEGAIGVRNKVAGGKMKKRK 446
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/436 (62%), Positives = 344/436 (78%), Gaps = 12/436 (2%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
ALLE + FA VL+PTRELA QISEQFEALGS I + CAV+VGG+D M Q+L
Sbjct: 84 NALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSL 137
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR
Sbjct: 138 ALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYI
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYI 257
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA +IL
Sbjct: 258 LNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSIL 317
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E + +
Sbjct: 318 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 377
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDDDIGRQ 425
IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R D ++DD
Sbjct: 378 IEHLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRAREDVGDNDDTEGA 437
Query: 426 FGINKK----KLSKRK 437
G+ K K+ KRK
Sbjct: 438 MGVRNKVAGGKMKKRK 453
>gi|291230627|ref|XP_002735268.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47-like
[Saccoglossus kowalevskii]
Length = 446
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/417 (65%), Positives = 339/417 (81%), Gaps = 7/417 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+E TFK LGL D L E CE + WK P+KIQ E+IP ALEGKD+IGLA+TGSGKTGAFAL
Sbjct: 20 QEPATFKSLGLVDVLCETCEQLKWKEPTKIQRESIPLALEGKDVIGLAETGSGKTGAFAL 79
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ LLE QR FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+DMM
Sbjct: 80 PILQDLLE--HPQR----LFALILTPTRELAFQISEQFEALGSAIGIKCAVVVGGIDMMS 133
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L L K+PH+VVATPGRL+DHL NTKGF+L ++KYLV+DEADR+LN DFE LD+IL V
Sbjct: 134 QALQLAKKPHVVVATPGRLVDHLENTKGFNLRSVKYLVMDEADRILNMDFEIELDKILKV 193
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IPR R+TYL+SATMTKKV KLQRA LKNPVK+E +KY TV+ L Q Y F+P+KYKD YL
Sbjct: 194 IPRERRTYLYSATMTKKVAKLQRASLKNPVKVEVNTKYQTVEKLLQYYLFIPSKYKDVYL 253
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
VYIL E++ +S MVF TC+ T+ +ALMLRNLG A+P+ G MSQ+KRLG LNKFK +
Sbjct: 254 VYILNELAGNSFMVFCSTCNNTQRVALMLRNLGLTAVPLHGQMSQNKRLGMLNKFKGKDR 313
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAG++G AI+ V QY++E
Sbjct: 314 SILIATDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGKSGKAITFVTQYDVEL 373
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR-KGGDEDD 420
Y +IE+LI K+LP +P+EEE+V++L+ERVTEA+R ++M + D+ +K+R+ + GD DD
Sbjct: 374 YQRIEQLISKQLPLYPSEEEDVMMLVERVTEAQRYARMEMTDNDDKKRKGRRGDFDD 430
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 269/430 (62%), Positives = 343/430 (79%), Gaps = 8/430 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A +E ++FK+LG+ D L EAC+ +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 20 AAGEESRSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGA 79
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALLE + FA VL+PTRELA QISEQFEALGS I + V+VGG+D
Sbjct: 80 FALPILQALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVHTTVIVGGID 133
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 134 AMSQSLALAKKPHVIIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 193
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 194 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKD 253
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQ+KRLGALNKFKA
Sbjct: 254 SYLVHILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGALNKFKA 313
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY+
Sbjct: 314 KARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYD 373
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
+E + +IE LIGKKLP FP +EEEV++L ERV EA+R+++M +++ G K+R + ++DDD
Sbjct: 374 VELFQRIEHLIGKKLPAFPMQEEEVMMLTERVAEAQRLARMELREQGEKKRSR--NDDDD 431
Query: 422 IGRQFGINKK 431
G+ K
Sbjct: 432 TEEAIGVRNK 441
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/441 (62%), Positives = 347/441 (78%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KI EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKILIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDT 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD D
Sbjct: 373 ELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMELREHGEKKKRSREDAGDND 432
Query: 420 DD---IGRQFGINKKKLSKRK 437
D IG + + K+ KRK
Sbjct: 433 DTEGAIGVRNKVAGGKMKKRK 453
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/443 (61%), Positives = 348/443 (78%), Gaps = 14/443 (3%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 17 GQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 76
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 77 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGID 130
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 131 SMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 190
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 191 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 250
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S ++F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 251 TYLVYILNELAGNSFIIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 310
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY+
Sbjct: 311 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 370
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDE 418
+E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 VELFQRIEHLIGKKLPVFPTQDDEVMMLTERVNEAQRFARMELREHGEKKKRSREDAGDN 430
Query: 419 DDDIGRQFGINKK----KLSKRK 437
DD G G+ K K+ KRK
Sbjct: 431 DDTEG-AMGVRNKVAGGKMKKRK 452
>gi|297736067|emb|CBI24105.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 288/336 (85%), Positives = 313/336 (93%), Gaps = 7/336 (2%)
Query: 1 MAEE-KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
MAE+ KEVK+FK+LG+ ++LVEACEN+GWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT
Sbjct: 1 MAEDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
GAFALPILQALL+ T FACVLSPTRELAIQI+EQFEALGSGI L+CAVLVGG
Sbjct: 61 GAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGG 114
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
VD QQ +AL KRPHIVV TPGRLMDHL+NTKGFSL T+KYLVLDEADRLLNDDFEK++D
Sbjct: 115 VDHTQQAIALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAID 174
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
EIL+VIPR R+TYLFSATMTKKV+KLQRACL+NPVKIE ASKYSTVDTLKQQYRFVPAKY
Sbjct: 175 EILSVIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYSTVDTLKQQYRFVPAKY 234
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
K+CYLVYILTE+S S+TMVFTRTCDATRLLAL+LRNLG RAIPISGHMSQ+KRLGALNKF
Sbjct: 235 KECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIPISGHMSQAKRLGALNKF 294
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 335
KAGECNILICTDVASRGLDIPSVDMVINYDIP+NSK
Sbjct: 295 KAGECNILICTDVASRGLDIPSVDMVINYDIPSNSK 330
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 96/114 (84%), Gaps = 5/114 (4%)
Query: 328 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 387
+ +P DYIHRVGRTARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPEFPA+EEEVL
Sbjct: 423 FTLPRVFGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVL 482
Query: 388 LLLERVTEAKRISQMTIKDSGNKRRRKGGDE-DDDIGRQF----GINKKKLSKR 436
LLLERVTEAKRISQM +K++G K++R+GGDE +++I R G + KKL KR
Sbjct: 483 LLLERVTEAKRISQMKVKETGGKKKRRGGDEGEEEIDRYLASKNGKSSKKLKKR 536
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/436 (62%), Positives = 345/436 (79%), Gaps = 12/436 (2%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D M Q+L
Sbjct: 84 NALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYI
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYI 257
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA +IL
Sbjct: 258 LNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSIL 317
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E + +
Sbjct: 318 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 377
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDDDIGRQ 425
IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R D ++DD
Sbjct: 378 IEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDARDNDDTEGA 437
Query: 426 FGINKK----KLSKRK 437
G+ K K+ KRK
Sbjct: 438 IGVRNKVAGGKMKKRK 453
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/413 (63%), Positives = 336/413 (81%), Gaps = 6/413 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
++FK+LG+ D L EAC+ +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 25 RSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPIL 84
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + FA VL+PTRELA QISEQFEALGS I + AV+VGG+D M Q+L
Sbjct: 85 QALLDAPQR------LFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSL 138
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHI++ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 139 ALAKKPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPR 198
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTK+V+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYI
Sbjct: 199 DRKTFLFSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDSYLVYI 258
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA +IL
Sbjct: 259 LNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSIL 318
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E + +
Sbjct: 319 LATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQR 378
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
IE LIGKKLP FP +EEEV++L ERV EA+R ++M +++ G K+R + D+DD
Sbjct: 379 IEHLIGKKLPAFPMQEEEVMMLTERVAEAQRFARMELREQGEKKRSRNADDDD 431
>gi|413934953|gb|AFW69504.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 434
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/422 (64%), Positives = 336/422 (79%), Gaps = 25/422 (5%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A ++ TF ELG+ ELVEAC+ +GWK P++IQAEAIPHAL+GKDLI LAQTGSGKTGA
Sbjct: 18 AAARQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEALGS I LRC+V
Sbjct: 78 FALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSV------ 128
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
V TPGRL+DHLT TKGFSL +KYLVLDEAD+LLN +FEKSLD+I
Sbjct: 129 ---------------VGTPGRLLDHLTETKGFSLKKIKYLVLDEADKLLNVEFEKSLDDI 173
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYSTVD+LKQ++ FVPA KD
Sbjct: 174 LSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYSTVDSLKQEFYFVPADDKD 233
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CYL+++L E S M+F RTC++TRLLALMLRNLG +A+ ISG MSQ KRLGALN+FKA
Sbjct: 234 CYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSISGQMSQDKRLGALNRFKA 293
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRTARAGR+G A+SLVNQYE
Sbjct: 294 KDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAVSLVNQYE 353
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS-GNKRRRKGGDEDD 420
+W++ IE+L+GKK+ + + +EVL+L +++AKRI+ +KDS G+K+RR GD+D+
Sbjct: 354 AQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKLKDSGGHKKRRNVGDDDE 413
Query: 421 DI 422
++
Sbjct: 414 EV 415
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 265/408 (64%), Positives = 336/408 (82%), Gaps = 6/408 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+E KTF+ELG+ D L E CE +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 15 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 74
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ LLE + +A VL+PTRELA QISEQFEALGS I ++ AV+VGG+DMM
Sbjct: 75 LPILQTLLESPQR------LYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMM 128
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 129 SQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 188
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD Y
Sbjct: 189 VIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKDSY 248
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA
Sbjct: 249 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKS 308
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V+QY++E
Sbjct: 309 RSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVSQYDVE 368
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+ +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +++ G K+
Sbjct: 369 LFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIELREHGEKK 416
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/421 (62%), Positives = 340/421 (80%), Gaps = 8/421 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
++FK+LG+ D L +AC+ +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 24 RSFKDLGVTDVLCKACDQLGWKVPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFALPIL 83
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALLE + FA VL+PTRELA QISEQFEALGS I ++ V+VGG+D M Q+L
Sbjct: 84 QALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQTTVIVGGIDTMSQSL 137
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PH+++ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 138 ALAKKPHVIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYI
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDSYLVYI 257
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA +IL
Sbjct: 258 LNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSIL 317
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E + +
Sbjct: 318 LATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQR 377
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFG 427
IE LIGKKLP FP +EEEV++L ERV EA+R+++M +++ G K+R + ++DDD G
Sbjct: 378 IEHLIGKKLPAFPMQEEEVMMLTERVAEAQRLARMELREQGEKKRSR--NDDDDTEEAIG 435
Query: 428 I 428
+
Sbjct: 436 V 436
>gi|344243858|gb|EGV99961.1| putative ATP-dependent RNA helicase DDX47 [Cricetulus griseus]
Length = 586
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/430 (63%), Positives = 341/430 (79%), Gaps = 12/430 (2%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL ALLE
Sbjct: 161 GVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET 220
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D M Q++AL K+P
Sbjct: 221 PQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSIALAKKP 274
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR R+T+L
Sbjct: 275 HIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFL 334
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYIL E++
Sbjct: 335 FSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAG 394
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA +IL+ TDVA
Sbjct: 395 NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVA 454
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E + +IE LIG
Sbjct: 455 SRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIG 514
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDDDIGRQFGINKK 431
KKLP FP ++EEV++L ERV+EA+R ++M +++ G K++RK D +DDD G+ K
Sbjct: 515 KKLPVFPTQDEEVMMLTERVSEAQRFARMELREHGEKKKRKREDAGDDDDTEGAMGVRNK 574
Query: 432 ----KLSKRK 437
K+ KRK
Sbjct: 575 VAGGKMKKRK 584
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/426 (62%), Positives = 342/426 (80%), Gaps = 12/426 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LG+ D L +ACE++ WK+P+KIQ E+IP L+GKD+IGLA+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGIVDVLCKACEDLKWKSPTKIQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQ 78
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+DMM Q L
Sbjct: 79 ALLE--NPQR----YFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALI 132
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 133 LAKKPHILIATPGRLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRE 192
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YLV+IL
Sbjct: 193 RRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHIL 252
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFKA +ILI
Sbjct: 253 NELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKAKNRSILI 312
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y +I
Sbjct: 313 STDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRI 372
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD------SGNKRRRKGGDEDDDI 422
E+LI K+LP +P +EEEV++L ERV EA+RI +M +KD SG +++ +GGDEDDD
Sbjct: 373 EQLISKQLPLYPTQEEEVMVLQERVAEAQRIVKMELKDIEENKKSGKRKKHQGGDEDDDT 432
Query: 423 GRQFGI 428
+ G+
Sbjct: 433 EQSMGV 438
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 278/457 (60%), Positives = 347/457 (75%), Gaps = 29/457 (6%)
Query: 4 EKEVKTFKEL-----------------GLRDELVEACENVGWKTPSKIQAEAIPHALEGK 46
E+E KTFK+L G+ D L EAC+ +GW P+KIQ EAIP AL+G+
Sbjct: 20 EEETKTFKDLVSVDDADSFLSCWRQAQGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGR 79
Query: 47 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 106
D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEALG
Sbjct: 80 DIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALG 133
Query: 107 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 166
S I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEA
Sbjct: 134 SSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEA 193
Query: 167 DRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVD 226
DR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA LKNPVK +SKY TV+
Sbjct: 194 DRILNMDFETEVDKILKVIPRDRKTLLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVE 253
Query: 227 TLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGH 286
L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G
Sbjct: 254 KLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQ 313
Query: 287 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 346
MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTAR
Sbjct: 314 MSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTAR 373
Query: 347 AGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
AGR+G AI+ V QY++E + +IE LIGKKLP FP E++EV++L ERVTEA+R ++M +++
Sbjct: 374 AGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTEDDEVMMLTERVTEAQRFARMELRE 433
Query: 407 SGNKRRR---KGGDEDDD---IGRQFGINKKKLSKRK 437
G K++R GD DD IG + + K+ KRK
Sbjct: 434 HGEKKKRTREDAGDNDDTEGAIGVRNKVAGGKMKKRK 470
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/407 (65%), Positives = 331/407 (81%), Gaps = 7/407 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E+EV TFK LG+ D L EACE + WK+P+KIQ E+IP AL+GKD+IGLA+TGSGKTG+F
Sbjct: 21 QEEEV-TFKSLGIVDVLCEACEQLKWKSPTKIQKESIPLALQGKDVIGLAETGSGKTGSF 79
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQALLE + FA VL+PTRELA QISEQFEALG+GI ++CAV+VGG+DM
Sbjct: 80 ALPILQALLETPQR------LFALVLTPTRELAFQISEQFEALGAGIGVKCAVVVGGIDM 133
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L L K+PH+V+ATPGRL+DHL NTKGFSL LKYLV+DEADR+LN DFE+ +D+IL
Sbjct: 134 MTQALTLAKKPHVVIATPGRLVDHLENTKGFSLKALKYLVMDEADRILNMDFEEEVDKIL 193
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R TYL+SATMTKKV+KLQRA LK+PVK+E +SKY TV+ L Q Y F+PAK+KD
Sbjct: 194 RVIPRERHTYLYSATMTKKVQKLQRASLKDPVKVEVSSKYQTVEKLMQYYLFIPAKFKDV 253
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLV++L E++ +S MVF TC T+ AL+LRNLG AIP+ G M Q+KRLGALNKFK+
Sbjct: 254 YLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLHGQMGQAKRLGALNKFKSK 313
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ILI TDVASRGLDIP VD V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 314 NRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 373
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN 409
E Y +IE LIGKKLP + EEEV++L+ERVTEA+R ++M +K+ +
Sbjct: 374 ELYQRIEHLIGKKLPLYQTSEEEVMVLMERVTEAQRFAKMELKEQDD 420
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/408 (65%), Positives = 331/408 (81%), Gaps = 6/408 (1%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ + +E +FK LG+ D L EACE + WK+PSKIQ EAIP AL+G D+IGLA+TGSGKTG
Sbjct: 15 LEDSEESVSFKSLGVVDVLCEACERLKWKSPSKIQREAIPVALQGSDIIGLAETGSGKTG 74
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFA+PILQ LL+ QR +A +L+PTRELA QISEQFEALGS I ++CAV+VGG+
Sbjct: 75 AFAIPILQKLLD--SPQR----LYALILTPTRELAFQISEQFEALGSAIGVKCAVVVGGI 128
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q+L L K+PHI++ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE+ +D+
Sbjct: 129 DMMSQSLMLAKKPHIIIATPGRLIDHLENTKGFNLRALKFLVMDEADRILNMDFEQEVDK 188
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R TYL+SATMTKKV KLQRA L+NPVK+E +SKY TVD L+Q Y FVPAK+K
Sbjct: 189 ILKVIPRERSTYLYSATMTKKVAKLQRASLQNPVKVEVSSKYQTVDKLQQYYLFVPAKFK 248
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV +L E++ +S MVFT TC T+ ALMLRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 249 DVYLVSVLNELAGNSFMVFTSTCANTQRTALMLRNLGLTAIPLHGQMSQSKRLGSLNKFK 308
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V+QY
Sbjct: 309 SKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVSQY 368
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
++E Y +IE LIGKKLP + EE+EV+ L+ERVTEA+R ++M + +S
Sbjct: 369 DVELYQRIEHLIGKKLPLYKTEEQEVMQLMERVTEAQRYAKMEMSESS 416
>gi|223947385|gb|ACN27776.1| unknown [Zea mays]
gi|413934955|gb|AFW69506.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 430
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/422 (63%), Positives = 334/422 (79%), Gaps = 29/422 (6%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A ++ TF ELG+ ELVEAC+ +GWK P++IQAEAIPHAL+GKDLI LAQTGSGKTGA
Sbjct: 18 AAARQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEALGS I LRC+VLVGGVD
Sbjct: 78 FALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVD 134
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
+QQ L++GKRPHIVV LDEAD+LLN +FEKSLD+I
Sbjct: 135 RVQQVLSIGKRPHIVV-------------------------LDEADKLLNVEFEKSLDDI 169
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYSTVD+LKQ++ FVPA KD
Sbjct: 170 LSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYSTVDSLKQEFYFVPADDKD 229
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CYL+++L E S M+F RTC++TRLLALMLRNLG +A+ ISG MSQ KRLGALN+FKA
Sbjct: 230 CYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSISGQMSQDKRLGALNRFKA 289
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRTARAGR+G A+SLVNQYE
Sbjct: 290 KDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAVSLVNQYE 349
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS-GNKRRRKGGDEDD 420
+W++ IE+L+GKK+ + + +EVL+L +++AKRI+ +KDS G+K+RR GD+D+
Sbjct: 350 AQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKLKDSGGHKKRRNVGDDDE 409
Query: 421 DI 422
++
Sbjct: 410 EV 411
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/425 (61%), Positives = 343/425 (80%), Gaps = 8/425 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FKELG+ + L EAC+ +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA+P+LQ
Sbjct: 80 SFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQ 139
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+LL A+ T+ VL+PTRELA QI+EQF+ALGS I ++ AV+VGG+DMM Q L
Sbjct: 140 SLLACAQRLHTL------VLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALV 193
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH+V+ATPGRL+DH+ NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR
Sbjct: 194 LAKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPRD 253
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKV+KLQRA L++PVK +SKY+TVD L+Q Y F+P+KYKDCYLV IL
Sbjct: 254 RRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCYLVSIL 313
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S MVF TC+ T+ +AL+LRNLG AIP+ G MSQ+KRLGALNKFK+ ++L+
Sbjct: 314 NELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLL 373
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E + +I
Sbjct: 374 ATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRI 433
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDE--DDDIGRQF 426
E LIGKKLP FP +EEEV++L+ERV+EA+R +++ +K+S KR+R + D+D +
Sbjct: 434 EALIGKKLPAFPTQEEEVMMLVERVSEAQRFARIEMKESSEKRKRPSAAQEVDEDGEQSS 493
Query: 427 GINKK 431
G+ KK
Sbjct: 494 GVRKK 498
>gi|326911793|ref|XP_003202240.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Meleagris gallopavo]
Length = 447
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/407 (64%), Positives = 331/407 (81%), Gaps = 6/407 (1%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ D L EAC+ +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPILQALL+
Sbjct: 25 GVTDVLCEACDQLGWKIPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDA 84
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ FA VL+PTRELA QISEQFEALGS I + AV+VGG+D M Q+LAL K+P
Sbjct: 85 PQR------LFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKP 138
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HI++ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE +D+IL VIPR R+T+L
Sbjct: 139 HIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRKTFL 198
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTK+V+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYIL E++
Sbjct: 199 FSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDSYLVYILNELAG 258
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S MVF TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA +IL+ TDVA
Sbjct: 259 NSFMVFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLATDVA 318
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E + +IE LIG
Sbjct: 319 SRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEHLIG 378
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
KKLP FP +EEEV++L ERV EA+R ++M +++ G K+R + GD+DD
Sbjct: 379 KKLPAFPMQEEEVMMLQERVAEAQRFARMELREQGEKKRSRNGDDDD 425
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/428 (62%), Positives = 343/428 (80%), Gaps = 8/428 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LG+ D L E CE + WKTP+KIQ EAIP AL+GKD+IGLA+TGSGKTGAFA+PILQ
Sbjct: 20 TFKDLGVTDVLCETCETLKWKTPTKIQKEAIPVALQGKDIIGLAETGSGKTGAFAIPILQ 79
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA +L+PTRELA QISEQ EALGS I ++CAV+VGG+DMM Q+L
Sbjct: 80 ALLE--NPQR----YFALILTPTRELAFQISEQIEALGSSIGVKCAVIVGGMDMMAQSLM 133
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL NTKGFSL LK LV+DEADR+LN DFE+ +D+IL VIPR
Sbjct: 134 LAKKPHIIIATPGRLVDHLENTKGFSLRNLKVLVMDEADRILNMDFEEEVDKILKVIPRE 193
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKV+KL RA L +PV++E ++K+ TV+ L+Q Y F+P KYKD YLV+IL
Sbjct: 194 RRTFLFSATMTKKVQKLHRASLVDPVRVEVSTKFQTVEQLQQYYIFIPVKYKDVYLVHIL 253
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S MVF TC+ T +AL+LRNLG AIP+ G M+Q+KRL +LNKFK+ +ILI
Sbjct: 254 NEMAGNSFMVFMATCNGTVRVALLLRNLGLDAIPLHGQMTQNKRLASLNKFKSKSRSILI 313
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDV+SRGLDIP VD+VIN+D+PT+SKDYIHRVGRTARAGR+G AI+LV QY++E Y +I
Sbjct: 314 STDVSSRGLDIPHVDVVINFDMPTHSKDYIHRVGRTARAGRSGKAITLVTQYDIELYQRI 373
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGI 428
E+LI KKLP + E++EV+ L ERV+EA+R+++M +KD G+K+ ++ D DDD G+
Sbjct: 374 EQLISKKLPLYQVEDDEVMCLQERVSEAQRLAKMNMKDMGDKKGKR--DLDDDEEGAMGV 431
Query: 429 NKKKLSKR 436
KK + K
Sbjct: 432 RKKNIGKH 439
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/429 (61%), Positives = 341/429 (79%), Gaps = 12/429 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LG+ D L + CE++ WK+P+KIQ EAIP LEGKD+IGLA+TGSGKT AFA+PILQ
Sbjct: 24 TWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEGKDIIGLAETGSGKTAAFAIPILQ 83
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+DMM Q L
Sbjct: 84 ALLE--NPQR----YFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALL 137
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 138 LAKKPHILIATPGRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRE 197
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YLV+IL
Sbjct: 198 RRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYVFIPVKFKDVYLVHIL 257
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFKA +ILI
Sbjct: 258 NELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKAKNRSILI 317
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y +I
Sbjct: 318 STDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRI 377
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS------GNKRRRKGGDEDDDI 422
E+LI K+LP +P EEEEV++L ERV EA+RI +M +KD G +++R+ +EDDD
Sbjct: 378 EQLISKQLPLYPTEEEEVMVLQERVAEAQRIVKMEMKDIEDSKKLGKRKKRQDDNEDDDT 437
Query: 423 GRQFGINKK 431
+ G+ K+
Sbjct: 438 EQSMGVRKR 446
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/416 (66%), Positives = 344/416 (82%), Gaps = 11/416 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++LG+ +L EA +GWK+PS IQ +AIPH L+G+D+IGLAQTGSGKTGAF+LPILQA
Sbjct: 1 FEKLGICTQLAEAAAGLGWKSPSNIQEQAIPHLLQGQDVIGLAQTGSGKTGAFSLPILQA 60
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L+E + FA +LSPTRELAIQI+EQ EALGSGI ++CAVLVGG+DMM Q +AL
Sbjct: 61 LMERPQEH------FALILSPTRELAIQIAEQVEALGSGIGVKCAVLVGGIDMMAQAIAL 114
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHI+V TPGR++DHL+NTKGF+L LK+LVLDEAD+LL+ DFE+ +D+IL VIPR R
Sbjct: 115 AKRPHILVGTPGRVVDHLSNTKGFNLKQLKHLVLDEADKLLDMDFEQEIDQILKVIPRDR 174
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
+T LFSATMT KV+KLQRACL PVK+E A+KYSTV+TL+QQY F+PAKYKDCYL Y+L
Sbjct: 175 RTQLFSATMTNKVQKLQRACLVRPVKVEVAAKYSTVETLRQQYVFIPAKYKDCYLAYVLN 234
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E+S S+ M+FTRTC++TR +ALMLRNLG A+PI GHMSQ KRLGALNKFKAGE +IL
Sbjct: 235 ELSGSTFMIFTRTCESTRRIALMLRNLGFGAVPIHGHMSQPKRLGALNKFKAGERSILAA 294
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIPSVD+VINYD NSKDYIHRVGRTARAGR+G ++++V QY++E + +IE
Sbjct: 295 TDVASRGLDIPSVDVVINYD---NSKDYIHRVGRTARAGRSGRSVTIVTQYDVELFQKIE 351
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK--DSGNKRRRKGGDEDDDIG 423
L G K+ +F AE EEVLLLLERV++A+R++ M +K D+G K +RKG D DD+ G
Sbjct: 352 HLTGVKMEQFQAEREEVLLLLERVSDAQRLAAMQMKEADAGKKGKRKGEDGDDEGG 407
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/445 (62%), Positives = 338/445 (75%), Gaps = 19/445 (4%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
+V TF LG+ EL AC+ + W S IQ ++IPHAL GKD+IGLAQTGSGKTGAFALP
Sbjct: 35 KVVTFASLGICKELCAACDAMKWPAASPIQIQSIPHALNGKDVIGLAQTGSGKTGAFALP 94
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+LQ LL AF VLSPTRELA QI+EQFE LG I ++CAVLVGG+DM Q
Sbjct: 95 VLQDLLHEPR------AFHTLVLSPTRELASQIAEQFECLGKDIGVKCAVLVGGMDMTSQ 148
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+L +GKRPH++V TPGR++DHL NTKGFSL LK L+LDEADRLLN DFE+ +D IL VI
Sbjct: 149 SLQIGKRPHVLVGTPGRVVDHLENTKGFSLRQLKVLILDEADRLLNLDFEEEIDTILKVI 208
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
PR R+T LFSATMT KV KLQRACL++PVK+E ASKYSTV +LKQ Y FVPAK+K+CY
Sbjct: 209 PRERRTQLFSATMTSKVNKLQRACLRDPVKVEVASKYSTVKSLKQNYLFVPAKHKECYAC 268
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y+L E+SAS+ M+FTRTC+ TR LAL+ RNLG AIPI G MSQ KR GALNKFK GE N
Sbjct: 269 YLLNELSASTIMMFTRTCEQTRKLALVARNLGFSAIPIHGQMSQPKRQGALNKFKGGERN 328
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVASRGLDIPSVD+VIN+D+P NSKDY+HRVGRTARAGR+G+AI+LV QY++E Y
Sbjct: 329 ILVATDVASRGLDIPSVDVVINFDVPMNSKDYVHRVGRTARAGRSGLAITLVTQYDVELY 388
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS------GNKRRRKGGDED 419
+IE+LI K+L ++P EEE+ L++LERV EA+RI+ ++D+ G KR R +
Sbjct: 389 QKIERLIEKRLEKYPVEEEQCLVMLERVNEAQRIAASQMRDADAKKGGGFKRIRNDDVGE 448
Query: 420 DD----IGRQ---FGINKKKLSKRK 437
DD IGR+ FG KK + K K
Sbjct: 449 DDLSAIIGRKKYAFGDEKKGMKKTK 473
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/443 (60%), Positives = 348/443 (78%), Gaps = 14/443 (3%)
Query: 3 EEKEVK--TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
E++ VK T+K+LG+ D L + CE++ WK+P+KIQ EAIP LEGKD+IGLA+TGSGKT
Sbjct: 11 EQENVKELTWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEGKDVIGLAETGSGKTA 70
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFA+PILQALLE QR +FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+
Sbjct: 71 AFAIPILQALLE--NPQR----YFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGM 124
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q L L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+DEADR+LN DFE +D+
Sbjct: 125 DMMSQALLLAKKPHILIATPGRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDK 184
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+K
Sbjct: 185 ILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFK 244
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFK
Sbjct: 245 DVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFK 304
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY
Sbjct: 305 AKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQY 364
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS------GNKRRRK 414
++E Y +IE+LI K+LP +P EEEEV++L ERV EA+RI +M +KD G +++R+
Sbjct: 365 DVELYQRIEQLISKQLPLYPTEEEEVMVLQERVAEAQRIVKMEMKDIEDSKKLGKRKKRQ 424
Query: 415 GGDEDDDIGRQFGINKKKLSKRK 437
+E+DD + G+ K+ K K
Sbjct: 425 DDNEEDDTEQSMGVRKRIKGKNK 447
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/402 (66%), Positives = 328/402 (81%), Gaps = 8/402 (1%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ D L EACE + WKTP+KIQ EAIP AL+G D+IGLA+TGSGKTGAFALPILQ LL+
Sbjct: 45 GIVDVLCEACEQLKWKTPTKIQKEAIPVALQGSDVIGLAETGSGKTGAFALPILQTLLD- 103
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ QR +A VL+PTRELA QISEQFEALG+ I ++CAV+VGG+DMM Q+L L K+P
Sbjct: 104 -KPQR----LYALVLTPTRELAFQISEQFEALGASIGIKCAVIVGGIDMMTQSLMLAKKP 158
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HIV+ATPGRL+DHL NTKGF+L +LKYLV+DEADR+LN DFE+ +D+IL IPR R T L
Sbjct: 159 HIVIATPGRLVDHLENTKGFNLRSLKYLVMDEADRILNMDFEQEVDKILKAIPRERNTLL 218
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKV KLQRA L+NPV++E +SKY TVD L+Q Y F+P K+KD YLVYIL E++
Sbjct: 219 FSATMTKKVAKLQRASLQNPVRVEVSSKYQTVDKLQQYYLFIPVKFKDVYLVYILNELAG 278
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S MVF TC T+ +ALMLRNLG AIP+ G MSQSKRLGALNKFK+ +ILI TDVA
Sbjct: 279 NSFMVFCSTCANTQRVALMLRNLGLTAIPLHGQMSQSKRLGALNKFKSKNRSILIATDVA 338
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+V+N DIPT+SKDYIHRVGRTARAGR+GVAI+ V+QY++E Y +IE LIG
Sbjct: 339 SRGLDIPHVDVVLNLDIPTHSKDYIHRVGRTARAGRSGVAITFVSQYDVELYQRIEHLIG 398
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS--GNKRRR 413
KKLP + EEEEV+ L+ERVTEA+R ++M + +S G K+RR
Sbjct: 399 KKLPLYKTEEEEVMQLMERVTEAQRYAKMEMNESERGRKKRR 440
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/402 (64%), Positives = 330/402 (82%), Gaps = 6/402 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+E TFK LG+ D L EACE +GWK PSKIQ E+IP AL+G D+IGLA+TGSGKTG+FAL
Sbjct: 24 EETVTFKSLGVTDVLCEACEILGWKAPSKIQKESIPVALQGSDVIGLAETGSGKTGSFAL 83
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
P+LQ LL+ QR + VL+PTRELA QISEQFEALG+ I ++CAV+VGG+DMM
Sbjct: 84 PVLQTLLD--NPQR----MYCLVLTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMMT 137
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q++ L K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE+ +++IL V
Sbjct: 138 QSMVLAKKPHIIIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFEQEVNKILKV 197
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IP+ R+TYL+SATMT KV KLQRACLKNPVK+E ++KY TVD L+Q Y F+PAK+KD YL
Sbjct: 198 IPKERKTYLYSATMTSKVAKLQRACLKNPVKVEVSTKYQTVDKLQQSYCFIPAKFKDVYL 257
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
VYIL E++ +S +VF TC T+ +ALMLRNLG AIP+ G M+Q+KRLGALNKFK+
Sbjct: 258 VYILNELAGNSFIVFCSTCANTQRVALMLRNLGMTAIPLHGQMNQTKRLGALNKFKSKSR 317
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+ILI TDVASRGLDIP V++V+N+DIPT+SKDYIHRVGRTARAG++G AI+LV QY++E
Sbjct: 318 SILIATDVASRGLDIPHVNVVVNFDIPTHSKDYIHRVGRTARAGKSGKAITLVTQYDVEL 377
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
Y +IE+LIGKKLP + E+EEV+++ ERVTEA+R ++M + +
Sbjct: 378 YQRIEQLIGKKLPLYKTEQEEVMMMTERVTEAQRYAKMEMNE 419
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/407 (63%), Positives = 331/407 (81%), Gaps = 6/407 (1%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
GL + L +AC+ + WK P+KIQ EAIP AL GKD+IGLA+TGSGKT AF LPILQALL+
Sbjct: 1 GLMEPLCQACDRLQWKQPTKIQCEAIPVALTGKDIIGLAETGSGKTAAFVLPILQALLD- 59
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ QR FA +L+PTRELA QISEQ EALGS I ++CAV++GG+DMM Q++ L K+P
Sbjct: 60 -KPQR----LFALILTPTRELAFQISEQIEALGSSIGVQCAVIIGGIDMMTQSIMLAKKP 114
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HI++ TPGRL DHL NTKGFSL LKYLV+DEADR+LN DFE +D+IL+V+P+ R+TYL
Sbjct: 115 HIIIGTPGRLADHLANTKGFSLRPLKYLVMDEADRILNMDFEAEVDKILSVLPKERRTYL 174
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKVKKLQRA +++PVKIE ++KY+TV+ L+Q Y FVPAKYKDCYLV IL E++
Sbjct: 175 FSATMTKKVKKLQRASVQDPVKIEVSTKYTTVEKLQQTYIFVPAKYKDCYLVSILNELAG 234
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S MVF TC T+ + LMLRNLG AIP+ G MSQSKRLGAL+KFK+ E +IL+ TDVA
Sbjct: 235 NSFMVFCATCINTQRIGLMLRNLGFNAIPLHGQMSQSKRLGALHKFKSKESSILVATDVA 294
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+VIN+D P++SKDYIHRVGRTARAGR+G +I V QY++E + +IE+LI
Sbjct: 295 SRGLDIPHVDIVINFDAPSHSKDYIHRVGRTARAGRSGRSIIFVTQYDVELFQRIEQLIA 354
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
KKLPE+P EEEV+LL+ERV EA+R ++M ++++ NK+RR DE++
Sbjct: 355 KKLPEYPTVEEEVMLLMERVAEAQRYAKMELQETMNKKRRPLDDEEE 401
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/407 (65%), Positives = 336/407 (82%), Gaps = 8/407 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++LG+ +L EA +GWK PS IQ +AIPH L G+D+IGLAQTGSGKTGAF+LPILQA
Sbjct: 19 FEKLGICTQLAEAAAGLGWKAPSHIQEQAIPHLLAGQDVIGLAQTGSGKTGAFSLPILQA 78
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L++ + FA +LSPTRELAIQI+EQ EALGSGI ++ VLVGG+DMM Q +AL
Sbjct: 79 LMDKPQEH------FALILSPTRELAIQIAEQVEALGSGIGVKSCVLVGGIDMMAQAIAL 132
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPH++V TPGR++DHL+NTKGFSL LK+LVLDEAD+LL+ DFE+ +D+IL VIPR R
Sbjct: 133 AKRPHVLVGTPGRVVDHLSNTKGFSLKQLKHLVLDEADKLLDMDFEQEIDQILKVIPRER 192
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
+T LFSATMT KV+KLQRACL PVKIE A KYSTVDTL+QQY F+PAKYKDCYL Y++
Sbjct: 193 RTQLFSATMTNKVQKLQRACLDKPVKIEVAHKYSTVDTLRQQYVFIPAKYKDCYLAYVIN 252
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E+S S+ M+FTRTC++TR +AL+LRNLG A+PI GHMSQ KRLGALNKFK+GE NIL+
Sbjct: 253 ELSGSTFMIFTRTCESTRRIALLLRNLGFGAVPIHGHMSQPKRLGALNKFKSGERNILVA 312
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIPSVD+VIN+D+P NSKDY+HRVGRTARAGR+G ++++V QY++E + +IE
Sbjct: 313 TDVASRGLDIPSVDVVINFDVPQNSKDYVHRVGRTARAGRSGRSVTIVTQYDVELFQKIE 372
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK--DSGNKRRRK 414
L G K+ +F AE EEVLLLLERV++A+R++ M +K D+G K +RK
Sbjct: 373 HLTGVKMEQFQAEREEVLLLLERVSDAQRLATMQMKEADAGKKGKRK 419
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/412 (63%), Positives = 332/412 (80%), Gaps = 6/412 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + T+ +LGL D L +ACE + W PSKIQ EAIP AL+GKD+IGLA+TGSGKT AF
Sbjct: 14 EEDKPATWSDLGLVDVLCKACEQLKWAQPSKIQKEAIPVALQGKDVIGLAETGSGKTAAF 73
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LLE QR +FA +L+PTRELA QISEQ EALG+ I ++CAV+VGG+DM
Sbjct: 74 ALPILQSLLE--NPQR----YFALILTPTRELAFQISEQIEALGANIGVKCAVIVGGMDM 127
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L L K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 128 MSQALILAKKPHILIATPGRLLDHLENTKGFNLKALKYLVMDEADRILNMDFEVEVDKIL 187
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R T+LFSATMTKKVKKLQRACL++PVK+E ++KY TV+ L+Q Y F+P K+KD
Sbjct: 188 KVIPRERHTFLFSATMTKKVKKLQRACLRDPVKVEVSTKYQTVEKLQQYYIFIPVKFKDV 247
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KRL AL KFKA
Sbjct: 248 YLVHILNEMAGNSFMIFCSTCNNTIRTALLLRNLGLTAVPLHGQMSQNKRLAALTKFKAK 307
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 308 NRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 367
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
E Y +IE+LIGK+LP + EE+EV++L ERV E++R+++M +KD G+K+ ++
Sbjct: 368 ELYQRIEQLIGKQLPLYKTEEDEVMVLQERVAESQRLAKMEMKDLGDKKGKR 419
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/429 (60%), Positives = 333/429 (77%), Gaps = 10/429 (2%)
Query: 8 KTFKELGLRDELVEACENV-GWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+TF++LG+ EL +AC + GW+ P+ IQ A+P AL +D+IGLAQTGSGKTGAFALPI
Sbjct: 17 QTFEDLGVCAELADACAKIMGWRAPTPIQCAAVPEALRERDVIGLAQTGSGKTGAFALPI 76
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LQ+LL+ + F + +LSPTRELA+QI+EQ E LG+G+ R A LVGGVDM Q
Sbjct: 77 LQSLLDAPQ------GFHSLILSPTRELAMQIAEQIETLGAGVGARTATLVGGVDMTTQA 130
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ LGKRPH++V TPGR++DHL NTKGFSL LK LVLDEADRLLN DFE+ +D+IL VIP
Sbjct: 131 IKLGKRPHVIVGTPGRVVDHLENTKGFSLRALKVLVLDEADRLLNLDFEEEIDKILRVIP 190
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T LFSATMT KV KLQRACL++PVK+E ++KYSTV++LKQ Y F+PAK+KDCY Y
Sbjct: 191 SDRRTQLFSATMTNKVAKLQRACLRDPVKVEVSAKYSTVESLKQHYLFIPAKHKDCYATY 250
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+ E+SAS+ +VF RTCDATR LAL+ RNLG A+PI G MSQ KR+ AL KFK+GE NI
Sbjct: 251 LFNELSASTLIVFARTCDATRKLALIARNLGFGAVPIHGQMSQPKRIAALQKFKSGERNI 310
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVASRGLDIPSVD+VINYD+P NSKDY+HRVGRTARAGR+G+A+++V QY++E Y
Sbjct: 311 LIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAVTMVTQYDVELYQ 370
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGDEDDDIG 423
+IE+LI KKL ++P EEE V+LL +RV EA+RI+ ++D ++ ++G +DDD
Sbjct: 371 KIERLINKKLDKYPLEEEAVMLLYDRVNEAQRIAIQQMRDQDERKGKGAKRGFKDDDDAD 430
Query: 424 RQFGINKKK 432
+ I KK
Sbjct: 431 KMLNILGKK 439
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/438 (61%), Positives = 341/438 (77%), Gaps = 17/438 (3%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
++++T+K+LGL + L +ACE + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFAL
Sbjct: 56 EQLQTWKDLGLNETLCKACEELKWKAPSKIQKEAIPVALQGKDIIGLAETGSGKTGAFAL 115
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PIL ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+DM+
Sbjct: 116 PILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVA 169
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+IL V
Sbjct: 170 QGLQLAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKILKV 229
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TVD L+Q Y F+P KYKD YL
Sbjct: 230 LPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVDQLQQYYIFIPVKYKDVYL 289
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
V+IL E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA
Sbjct: 290 VHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNR 349
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI++V QY++E
Sbjct: 350 SILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITMVTQYDIEL 409
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG--------- 415
Y +IE+L+GK+LP + EE+EV+ L ERV EA+R +++ +KD + + KG
Sbjct: 410 YQRIEQLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKDLEDSKSYKGSKGNKRAAL 469
Query: 416 GDEDDDIGRQFGINKKKL 433
GD DD QF +K++
Sbjct: 470 GDIDD--SEQFTGARKRM 485
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/422 (63%), Positives = 337/422 (79%), Gaps = 9/422 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+++ T+K+LGL + L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 56 AEEQKL-TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGA 114
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+D
Sbjct: 115 FALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 168
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+I
Sbjct: 169 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 228
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD
Sbjct: 229 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 288
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA
Sbjct: 289 VYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKA 348
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+LV+QY+
Sbjct: 349 KNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYD 408
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR--RRKGGDED 419
+E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +KD + R ++GGD
Sbjct: 409 IELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKDLEDTRGGHKRGGDTH 468
Query: 420 DD 421
DD
Sbjct: 469 DD 470
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/434 (61%), Positives = 345/434 (79%), Gaps = 11/434 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LG+ D L +ACE++ WK+P+KIQ EAIP ALEGKD+IGLA+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGIVDILHKACEDLKWKSPTKIQCEAIPLALEGKDIIGLAETGSGKTAAFALPILQ 78
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+DMM Q L
Sbjct: 79 ALLE--NPQR----YFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALI 132
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL NTKGFSL +LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 133 LAKKPHILIATPGRLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRE 192
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YLV+IL
Sbjct: 193 RKTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHIL 252
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFKA +ILI
Sbjct: 253 NELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKAKNRSILI 312
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y +I
Sbjct: 313 STDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRI 372
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN-----KRRRKGGDEDDDIG 423
E+LI K+LP +P +EEEV++L ERV EA+RI +M +KD + KR+++ D++DD
Sbjct: 373 EQLISKQLPLYPTQEEEVMVLEERVAEARRIVKMEMKDIEDSKKIGKRKKRQDDDEDDTE 432
Query: 424 RQFGINKKKLSKRK 437
+ G+ K+ K K
Sbjct: 433 QSLGVRKRIKGKNK 446
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/422 (63%), Positives = 337/422 (79%), Gaps = 9/422 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+++ T+K+LGL + L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 56 AEEQKL-TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGA 114
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+D
Sbjct: 115 FALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 168
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+I
Sbjct: 169 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 228
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD
Sbjct: 229 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 288
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA
Sbjct: 289 VYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKA 348
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+LV+QY+
Sbjct: 349 KNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYD 408
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR--RRKGGDED 419
+E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +KD + R ++GGD
Sbjct: 409 IELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKDLEDTRGGHKRGGDTH 468
Query: 420 DD 421
DD
Sbjct: 469 DD 470
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/435 (61%), Positives = 337/435 (77%), Gaps = 18/435 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LGL + L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPIL
Sbjct: 58 TWKDLGLSETLCKACDELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGKTGAFALPILH 117
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+DM+ Q L
Sbjct: 118 ALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVIVGGMDMVAQGLQ 171
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+IL V+PR
Sbjct: 172 LAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 231
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TVD L+Q Y F+P KYKD YLV+IL
Sbjct: 232 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVDQLQQYYLFIPVKYKDVYLVHIL 291
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA +ILI
Sbjct: 292 NELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILI 351
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI++V+QY++E Y +I
Sbjct: 352 STDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITIVSQYDIELYQRI 411
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD----------SGNKRRRKGGDE 418
E+L+GK+LP + EE+EV+ L ERV EA+R +++ KD GNKR ++
Sbjct: 412 EQLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEFKDLEDSKGYKGGRGNKRTAASDNQ 471
Query: 419 DDDIGRQFGINKKKL 433
DD QF +K++
Sbjct: 472 DD--SEQFTGARKRM 484
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/424 (62%), Positives = 338/424 (79%), Gaps = 11/424 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AE++++ T+K+LGL + L +AC+ + W++PSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 63 AEDQKL-TWKDLGLNETLCQACDELKWRSPSKIQREAIPVALQGKDVIGLAETGSGKTGA 121
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+D
Sbjct: 122 FALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 175
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+I
Sbjct: 176 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 235
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD
Sbjct: 236 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 295
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL +++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA
Sbjct: 296 VYLVHILNDLAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKA 355
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+LV QY+
Sbjct: 356 KNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVTQYD 415
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD----SGNKRRRKGGD 417
+E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +KD G K ++GGD
Sbjct: 416 IELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKDLEDTKGVKGHKRGGD 475
Query: 418 EDDD 421
DD
Sbjct: 476 IHDD 479
>gi|384252067|gb|EIE25544.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 415
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/401 (66%), Positives = 331/401 (82%), Gaps = 8/401 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E +K F++LG+ +L EA ++GWK P+ IQ +A+PH L D+IGLAQTGSGKTGAFA
Sbjct: 10 EDAIKLFEKLGVCRQLAEAAASLGWKVPTSIQEQAVPHLL--ADVIGLAQTGSGKTGAFA 67
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ LL+ T A FA VLSPTRELA+QI+EQFEALG+GI +RCAVLVGG+DMM
Sbjct: 68 MPILQELLD------TPQANFALVLSPTRELALQIAEQFEALGAGIGVRCAVLVGGIDMM 121
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +ALGKRPHI+V TPGR++DHL+NTKGF+L L++LVLDEADRLLN DFE+ +D+IL
Sbjct: 122 AQAIALGKRPHIIVGTPGRVVDHLSNTKGFTLKALRHLVLDEADRLLNMDFEQEIDQILK 181
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T LFSATMT KV KLQRACL+NPVK+E +KY TVDTL+QQY F+PAK+KDCY
Sbjct: 182 VIPRERRTQLFSATMTTKVAKLQRACLQNPVKVEVDAKYRTVDTLRQQYLFIPAKHKDCY 241
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L Y LTE++ ++ MVFTRTCD TR LALMLRNLG A+PI G MSQ KRLGALNKFKAGE
Sbjct: 242 LAYFLTELAGATFMVFTRTCDNTRKLALMLRNLGFDALPIHGQMSQPKRLGALNKFKAGE 301
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL TDVASRGLDIP+VD+V+NYD+P NSKDY+HRVGRTARAGR+G +++LV QY++E
Sbjct: 302 RSILAATDVASRGLDIPAVDVVVNYDVPINSKDYVHRVGRTARAGRSGRSLTLVTQYDVE 361
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 404
+ +IE L G+K+ ++ AEEE LLLLERVTEA++++ M +
Sbjct: 362 QFQKIEALTGQKMEKYDAEEEAALLLLERVTEAQKMATMQV 402
>gi|281349896|gb|EFB25480.1| hypothetical protein PANDA_006406 [Ailuropoda melanoleuca]
Length = 383
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/389 (66%), Positives = 318/389 (81%), Gaps = 6/389 (1%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL ALLE
Sbjct: 1 GVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET 60
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D M Q+LAL K+P
Sbjct: 61 PQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKP 114
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR R+T+L
Sbjct: 115 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFL 174
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD YLVYIL E++
Sbjct: 175 FSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAG 234
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA +IL+ TDVA
Sbjct: 235 NSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVA 294
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E + +IE LIG
Sbjct: 295 SRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIG 354
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQM 402
KKLP FP +E+EV++L ERVTEA+R ++M
Sbjct: 355 KKLPVFPTQEDEVMMLTERVTEAQRFARM 383
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/438 (61%), Positives = 347/438 (79%), Gaps = 12/438 (2%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
KE+ T+K+LG+ D L +ACE++ WK+P+KIQ EAIP ALEGKD+IGLA+TGSGKT AFAL
Sbjct: 16 KEI-TWKDLGIVDVLCKACEDLKWKSPTKIQYEAIPLALEGKDIIGLAETGSGKTAAFAL 74
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQALLE QR +FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+DMM
Sbjct: 75 PILQALLE--NPQR----YFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMS 128
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L L K+PHI++ATPGRL+DHL NTKGFSL +LK+LV+DEADR+LN DFE +D+IL V
Sbjct: 129 QALILAKKPHILIATPGRLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRV 188
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YL
Sbjct: 189 IPRERKTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYL 248
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
V+IL E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFKA
Sbjct: 249 VHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKAKNR 308
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E
Sbjct: 309 SILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVEL 368
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN-----KRRRKGGDED 419
Y +IE+LI K+LP + +EEEV++L ERV EA+RI +M +KD + KR+++ D++
Sbjct: 369 YQRIEQLISKQLPLYATQEEEVMVLEERVAEARRIVKMEMKDIEDSKKVGKRKKRQDDDE 428
Query: 420 DDIGRQFGINKKKLSKRK 437
DD + G+ K+ K K
Sbjct: 429 DDTEQSLGVRKRIKGKNK 446
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/398 (65%), Positives = 323/398 (81%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LG+ D L EACE + WK+P+KIQ EAIP AL+G+D+IGLA+TGSGKT +FALPILQ
Sbjct: 33 TFKSLGVVDVLCEACEQLKWKSPTKIQKEAIPVALQGRDVIGLAETGSGKTASFALPILQ 92
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR FA VL+PTRELA QISEQFEALG+ I ++ AV+VGG+DMM Q L
Sbjct: 93 ALLE--NPQR----LFALVLTPTRELAFQISEQFEALGASIGVKSAVIVGGIDMMTQALL 146
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH+++ATPGRL+DHL NTKGFSL +LKYLV+DEADR+LN DFE+ +D+IL VIPR
Sbjct: 147 LAKKPHVIIATPGRLVDHLENTKGFSLKSLKYLVMDEADRILNMDFEEEVDKILRVIPRE 206
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+TYL+SATMTKKV+KLQRA L++PVK+E +SKY TV+ L Q Y F+PAK+KD YLV++L
Sbjct: 207 RRTYLYSATMTKKVQKLQRASLRDPVKVEVSSKYQTVEKLMQYYLFIPAKFKDVYLVHLL 266
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S MVF TC T+ AL+LRNLG AIP+ G M Q+KRLG+L KFK+ +ILI
Sbjct: 267 NELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLHGQMGQAKRLGSLTKFKSKNRSILI 326
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E Y +I
Sbjct: 327 ATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELYQRI 386
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E LIGKKLP + EEEV+ L+ERVTEA+R ++M +K+
Sbjct: 387 EHLIGKKLPLYETVEEEVMALVERVTEAQRFAKMELKE 424
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/404 (64%), Positives = 327/404 (80%), Gaps = 6/404 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E E T+K+LGL D L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAF
Sbjct: 66 DENEKLTWKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAF 125
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE QR FFA VL+PTRELA QI EQFEALGS I ++C V+VGG+DM
Sbjct: 126 ALPILHALLE--NPQR----FFALVLTPTRELAFQIGEQFEALGSSIGIKCCVVVGGMDM 179
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L L K+PHI++ATPGRL+DHL N KGF+L ++KYLV+DEADR+LN DFE LD+IL
Sbjct: 180 VAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKSIKYLVMDEADRILNMDFEVELDKIL 239
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD
Sbjct: 240 KVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQYYLFIPVKYKDV 299
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA
Sbjct: 300 YLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAK 359
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+LV+QY++
Sbjct: 360 DRSILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDI 419
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 420 ELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKD 463
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/398 (65%), Positives = 324/398 (81%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LGL + L +ACE + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPILQ
Sbjct: 56 TWKDLGLNETLCQACEELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGKTGAFALPILQ 115
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+DM+ Q L
Sbjct: 116 ALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQ 169
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+IL V+PR
Sbjct: 170 LAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 229
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD YLV+IL
Sbjct: 230 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHIL 289
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA +ILI
Sbjct: 290 NELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILI 349
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI++V+QY++E Y +I
Sbjct: 350 STDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGRAITMVSQYDIELYQRI 409
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E L+GK+LP + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 410 EHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKD 447
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/398 (65%), Positives = 323/398 (81%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LGL D L +ACE + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPIL
Sbjct: 65 TWKDLGLNDTLCKACEELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGKTGAFALPILH 124
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+DM+ Q L
Sbjct: 125 ALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQ 178
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+IL V+PR
Sbjct: 179 LAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 238
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TVD L+Q Y F+P KYKD YLV+IL
Sbjct: 239 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVDQLQQYYIFIPVKYKDVYLVHIL 298
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA +ILI
Sbjct: 299 NELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILI 358
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI++V QY++E Y +I
Sbjct: 359 STDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGQAITMVTQYDIELYQRI 418
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E+L+GK+LP + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 419 EQLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKD 456
>gi|348689923|gb|EGZ29737.1| hypothetical protein PHYSODRAFT_309945 [Phytophthora sojae]
Length = 482
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/413 (62%), Positives = 322/413 (77%), Gaps = 11/413 (2%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F+ELG+ + EA E VGW PSKIQ +AIPH L GKD+IGLA+TGSGKTGAF +PIL
Sbjct: 31 KSFQELGVDAAICEAIEAVGWSQPSKIQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPIL 90
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL R +A VL+PTRELA QI EQFEALG+ I L+CA +VGG+DMMQQ +
Sbjct: 91 QSLL------RNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQV 144
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL ++PH+V+ATPGRL+DHL NTKGFSL T+K+LVLDEADR+L+ DFE+ +++I+ ++P
Sbjct: 145 ALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPA 204
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT KV+KLQRA LK+PVK+E K++T +TLKQ Y F+PAK+KDCYL Y+
Sbjct: 205 ERNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFATPETLKQHYLFIPAKFKDCYLAYV 264
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L EV+ S ++F TC+ T+ + LMLRNLG +AI + G M Q RLGALNKFKA N+L
Sbjct: 265 LNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPSRLGALNKFKAKARNVL 324
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+CTDVASRGLDIPSVD+VINYDIPT+ KDYIHRVGRTARAGR GVAIS V QY++E Y +
Sbjct: 325 VCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQYDVELYQR 384
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGNKRRRKG 415
IE L+G KL +P EEE VL++ ERV EA+RI+ + +K+ SG KR R G
Sbjct: 385 IEHLLGTKLDAYPCEEETVLVMSERVNEAQRIATIEMKESVANGSGFKRGRYG 437
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/406 (64%), Positives = 326/406 (80%), Gaps = 8/406 (1%)
Query: 3 EEK--EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
EEK E TFK LG+ D L EACE + WK P+KIQ EA+P AL+G+D+IGLA+TGSGKT
Sbjct: 18 EEKSEENVTFKSLGVVDVLCEACEQLKWKAPTKIQREALPVALQGRDVIGLAETGSGKTA 77
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
+FALPILQALLE + FA VL+PTRELA QISEQFEALG+ I ++ AV+VGG+
Sbjct: 78 SFALPILQALLETPQR------LFALVLTPTRELAFQISEQFEALGASIGVKSAVIVGGI 131
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q L L K+PH+++ATPGRL+DHL NTKGF+L +LKYLV+DEADR+LN DFE+ +D+
Sbjct: 132 DMMTQALTLAKKPHVIIATPGRLVDHLENTKGFNLKSLKYLVMDEADRILNMDFEEEVDK 191
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+TYL+SATMTKKV+KLQRA L++PVK+E +SKY TV+ L Q Y F+PAK+K
Sbjct: 192 ILRVIPRERRTYLYSATMTKKVQKLQRASLRDPVKVEVSSKYQTVEKLMQYYLFIPAKFK 251
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV++L E++ +S MVF TC T+ AL+LRNLG AIP+ G M Q+KRLGAL KFK
Sbjct: 252 DVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLHGQMGQAKRLGALTKFK 311
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ +ILI TDVASRGLDIP VD V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 312 SKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 371
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
++E Y +IE+LIGKKLP + EEEV+ L+ERVTEA+R ++M +K+
Sbjct: 372 DVELYQRIEQLIGKKLPLYETVEEEVMSLVERVTEAQRFAKMELKE 417
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/398 (64%), Positives = 322/398 (80%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LGL D L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPIL
Sbjct: 70 TWKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 129
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE + +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+DM+ Q L
Sbjct: 130 ALLESPQR------YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQ 183
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+IL V+PR
Sbjct: 184 LAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 243
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD YLV+IL
Sbjct: 244 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHIL 303
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA +ILI
Sbjct: 304 NELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILI 363
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI++V+QY++E Y +I
Sbjct: 364 STDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITIVSQYDIELYQRI 423
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E L+GK+LP + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 424 EHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKD 461
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/398 (64%), Positives = 322/398 (80%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LGL D L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPIL
Sbjct: 70 TWKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 129
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE + +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+DM+ Q L
Sbjct: 130 ALLESPQR------YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQ 183
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+IL V+PR
Sbjct: 184 LAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 243
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD YLV+IL
Sbjct: 244 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHIL 303
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA +ILI
Sbjct: 304 NELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILI 363
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI++V+QY++E Y +I
Sbjct: 364 STDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITIVSQYDIELYQRI 423
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E L+GK+LP + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 424 EHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKD 461
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/398 (65%), Positives = 323/398 (81%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LGL + L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPIL
Sbjct: 70 TWKDLGLNETLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 129
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+DM+ Q L
Sbjct: 130 ALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQ 183
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+IL V+PR
Sbjct: 184 LAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 243
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD YLV+IL
Sbjct: 244 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHIL 303
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E+S +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFKA +ILI
Sbjct: 304 NELSGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILI 363
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+LV+QY++E Y +I
Sbjct: 364 STDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRI 423
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E L+GK+LP + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 424 EHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLELKD 461
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/399 (65%), Positives = 322/399 (80%), Gaps = 6/399 (1%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ L EAC+ + W P+K+Q EAIP AL+G+D+IGLA+TGSGKT AFALPILQALLE
Sbjct: 68 GVVPVLCEACKQLNWTDPTKVQIEAIPLALQGRDVIGLAETGSGKTAAFALPILQALLE- 126
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
QR FA VL+PTRELA QI+EQFEALG+ I ++ AV+VGGVDM+ Q L L K+P
Sbjct: 127 -HPQR----LFALVLTPTRELAYQIAEQFEALGACIGIKVAVIVGGVDMVTQALCLAKKP 181
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
H++VATPGRL+DHL NTKGFSL +LKYLV+DEADR+L+ DFE +++IL VIPR R+TYL
Sbjct: 182 HVIVATPGRLVDHLENTKGFSLRSLKYLVMDEADRILDMDFESEVNKILQVIPRERKTYL 241
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKV KLQRA L++PVK+E +SKY TVD L+Q Y F+P K+KDCYLVYIL E++
Sbjct: 242 FSATMTKKVTKLQRASLQDPVKVEVSSKYQTVDKLQQHYIFIPQKFKDCYLVYILNEMAG 301
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
S +VFT TC + AL+LRNLG A+P+ G MSQ+KRLGALNKFKA + +ILI TDVA
Sbjct: 302 KSCIVFTSTCANSLRTALLLRNLGFTAVPLHGQMSQAKRLGALNKFKAKDRSILIATDVA 361
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR G++I+ V QY++E Y +IE L+G
Sbjct: 362 SRGLDIPHVDLVINFDIPTHSKDYIHRVGRTARAGRAGISITFVTQYDVELYQRIEYLLG 421
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
K+LP F EE EVL LLERVTEA RI++M +K+ +K+R
Sbjct: 422 KQLPLFKTEEPEVLSLLERVTEANRIAKMQVKELEDKKR 460
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/414 (63%), Positives = 330/414 (79%), Gaps = 7/414 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+EEK+ +++++GL D L EAC + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 52 SEEKQA-SWEDMGLIDTLCEACRALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKTGA 110
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALLE QR +FA +L+PTRELA QISEQFEALG+ I ++C V+VGG+D
Sbjct: 111 FALPILQALLE--NPQR----YFAVILTPTRELAYQISEQFEALGASIGIKCCVIVGGMD 164
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L ++PHI++ATPGRL+DHL NTKGF+L +KYLV+DEADR+LN DFE L++I
Sbjct: 165 MVSQALHLARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELEKI 224
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKVKKL+RA LK+PVK+E +SKY TV+ L Q Y F+PAKYKD
Sbjct: 225 LKVIPRERRTFLFSATMTKKVKKLERASLKDPVKVEVSSKYQTVEKLLQYYIFIPAKYKD 284
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E++ +S M+F TC+ T ALMLR LG A+P+ G MSQ+KRL ALNKFK
Sbjct: 285 VYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPLHGQMSQNKRLAALNKFKG 344
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR G A++ V QY+
Sbjct: 345 KNRQILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRAGKAVTFVTQYD 404
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+E Y +IE L+GKKLP+F EE+EV+ L ERV EA+R +++ +KD +++ KG
Sbjct: 405 VELYQRIEHLLGKKLPQFKCEEDEVMALQERVGEAQRTARLELKDIDDRKGSKG 458
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/407 (62%), Positives = 331/407 (81%), Gaps = 8/407 (1%)
Query: 2 AEEKEVK--TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
A+EK + T+K+LG+ D L +ACE++ WK P+KIQ EAIP ++GKD+IGLA+TGSGKT
Sbjct: 16 ADEKNTENLTWKDLGIVDSLCQACEDLKWKAPTKIQREAIPLTIQGKDVIGLAETGSGKT 75
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
AFALPILQALLE QR +FA +L+PTRELA QISEQFEALG+ I ++C V+VGG
Sbjct: 76 AAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEALGASIGVKCVVIVGG 129
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
+DMM Q+L L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+DEADR+LN DFE +D
Sbjct: 130 MDMMTQSLMLAKKPHIIIATPGRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVD 189
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+
Sbjct: 190 KILRVIPRERRTLLFSATMTKKVQKLQRASLQNPVKVEVSTKYQTVEKLQQYYVFIPVKF 249
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
KD YLV+IL E+S +S M+F TC+ T AL+LR+LG A+P+ G MSQ+KR+ AL KF
Sbjct: 250 KDVYLVHILNELSGNSFMIFCSTCNNTMRTALLLRSLGFMAVPLHGQMSQNKRIAALTKF 309
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
KA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G++++ V Q
Sbjct: 310 KAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGISVTFVTQ 369
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
Y++E Y +IE+LIGK+LP + EE+EV++L ERV EA+R+ +M +KD
Sbjct: 370 YDVELYQRIEQLIGKQLPIYKTEEQEVMVLQERVAEAQRMVKMEMKD 416
>gi|125601387|gb|EAZ40963.1| hypothetical protein OsJ_25445 [Oryza sativa Japonica Group]
Length = 414
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/390 (64%), Positives = 319/390 (81%), Gaps = 5/390 (1%)
Query: 26 VGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFA 85
+GWK P++IQAE IP AL+G+D+IG+ QTGSGKT AFALPI+QALLE P FFA
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLE----HEHRPCFFA 56
Query: 86 CVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMD 145
CVL+PTRELAIQI++QFEALGS ISL+C+VL+GG+ QT++L KRPH+VV TPGRL+D
Sbjct: 57 CVLAPTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLD 116
Query: 146 HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKL 205
HLTNTKGFS LKYLVLDEAD LL DF+K++D+ILNVIP+ R+T+LFSATMT+KVKKL
Sbjct: 117 HLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKL 176
Query: 206 QRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDA 265
+RACLKNPVK+E ASKYS VDTL+Q VPAKYKDCYL+++L ++ S MVF RTC++
Sbjct: 177 RRACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCES 236
Query: 266 TRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMV 325
TRLLALMLRNL +AI ISG MSQ KRLGALN+F+ +CNIL+CTDVASRGLDI VD+V
Sbjct: 237 TRLLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVV 296
Query: 326 INYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI-GKKLPEFPAEEE 384
INYD P NSKDYIHRVGRTARAG++G A+SLVNQ+E E++ E+ + G+++P + +
Sbjct: 297 INYDFPLNSKDYIHRVGRTARAGQSGYAVSLVNQFEGEFFKLTEQFLGGEEIPARKVDAD 356
Query: 385 EVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
E+++L ER+ ++KRI+ T+ +SG +R +
Sbjct: 357 EIMILHERIYDSKRIALKTMNESGYHKRMR 386
>gi|301119991|ref|XP_002907723.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262106235|gb|EEY64287.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 479
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/433 (59%), Positives = 329/433 (75%), Gaps = 11/433 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELG+ + EA E VGW PSKIQ +AIPH L GKD+IGLA+TGSGKTGAF +PILQ
Sbjct: 29 SFAELGVDSAICEAIEAVGWSAPSKIQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPILQ 88
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+LL QR +A VL+PTRELA QI EQFEALG+ I L+CA +VGG+DMMQQ +A
Sbjct: 89 SLLH--NPQR----LYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVA 142
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L ++PH+V+ATPGRL+DHL NTKGFSL T+K+LVLDEADR+L+ DFE+ +++I+ ++P
Sbjct: 143 LARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPAD 202
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV+KLQRA LK+PVK+E K++T +TLKQ Y F+PAK+KDCYL Y+L
Sbjct: 203 RNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVL 262
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
EV+ S ++F TC+ T+ + LMLRNLG +AI + G M Q RLGALNKFKA N+L+
Sbjct: 263 NEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPSRLGALNKFKAKARNVLV 322
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
CTDVASRGLDIPSVD+VINYDIPT+ KDYIHRVGRTARAGR GVAIS V QY++E Y +I
Sbjct: 323 CTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQYDVELYQRI 382
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGNKRRRKGGDEDDDIG 423
E L+G KL + EEE VL++ ERV EA+RI+ + +K+ +G KR R D+++
Sbjct: 383 EHLLGTKLDAYSCEEETVLVITERVNEAQRIATIEMKEAAANGTGIKRGRYARDDNEGDD 442
Query: 424 RQFGINKKKLSKR 436
+ G K K + R
Sbjct: 443 EEGGEKKYKSAAR 455
>gi|340372039|ref|XP_003384552.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Amphimedon queenslandica]
Length = 451
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/397 (64%), Positives = 319/397 (80%), Gaps = 6/397 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ++G+ L ++CE +GW TP+ IQ EAIP ALEG+D+IGLA+TGSGKTGAF+LPILQ
Sbjct: 27 TFSDIGITSVLCQSCEEMGWTTPTDIQREAIPVALEGRDVIGLAETGSGKTGAFSLPILQ 86
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+LL+ T FA VL+PTRELA QISEQFEALG I ++CAV+VGGVDMM Q LA
Sbjct: 87 SLLD------TPTRLFALVLTPTRELAFQISEQFEALGGRIGVKCAVVVGGVDMMTQALA 140
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH+V+ATPGRL+DHL NTKGFSL ++KYLV+DEADR+LN DF + +D+IL V+ R
Sbjct: 141 LAKKPHVVIATPGRLVDHLENTKGFSLRSVKYLVMDEADRILNMDFGEEVDKILKVLSRE 200
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+TYL+SATMTKKV+KLQRA L NP+K+E ++KY TVD L+Q Y F+P+KYKDCYLV IL
Sbjct: 201 RRTYLYSATMTKKVQKLQRASLHNPIKVEVSTKYQTVDKLQQSYIFIPSKYKDCYLVSIL 260
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E + +S MVF TC T+ A+MLRNLG AIP+ G M+Q KRLGAL+KFK+ +ILI
Sbjct: 261 NEFAGNSFMVFCSTCANTQRTAVMLRNLGLPAIPLYGKMAQMKRLGALSKFKSKSRSILI 320
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E Y +I
Sbjct: 321 ATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRAITFVTQYDVELYQRI 380
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 405
E LIGKKLP FP EEEVL L ERV EA+R ++M ++
Sbjct: 381 ESLIGKKLPLFPTVEEEVLSLAERVAEAQRYARMEMQ 417
>gi|413934954|gb|AFW69505.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 432
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/399 (65%), Positives = 317/399 (79%), Gaps = 28/399 (7%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A ++ TF ELG+ ELVEAC+ +GWK P++IQAEAIPHAL+GKDLI LAQTGSGKTGA
Sbjct: 18 AAARQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEALGS I LRC+VLVGGVD
Sbjct: 78 FALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVD 134
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
+QQ L++GKRPHIVV LDEAD+LLN +FEKSLD+I
Sbjct: 135 RVQQVLSIGKRPHIVV-------------------------LDEADKLLNVEFEKSLDDI 169
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYSTVD+LKQ++ FVPA KD
Sbjct: 170 LSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYSTVDSLKQEFYFVPADDKD 229
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CYL+++L E S M+F RTC++TRLLALMLRNLG +A+ ISG MSQ KRLGALN+FKA
Sbjct: 230 CYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSISGQMSQDKRLGALNRFKA 289
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRTARAGR+G A+SLVNQYE
Sbjct: 290 KDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARAGRSGYAVSLVNQYE 349
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 400
+W++ IE+L+GKK+ + + +EVL+L +++AKRI+
Sbjct: 350 AQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIA 388
>gi|449666070|ref|XP_002163050.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Hydra magnipapillata]
Length = 431
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/418 (62%), Positives = 334/418 (79%), Gaps = 7/418 (1%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ D L E+C +GW P+KIQ EAIP ALEGKD+IGLA+TGSGKTGAFALP+LQ LL+
Sbjct: 1 GVTDVLCESCLRLGWTHPTKIQREAIPLALEGKDIIGLAETGSGKTGAFALPVLQTLLD- 59
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
QR +A V++PTRELA QISEQFEALGS I ++CAV+VGGVD+M Q+LAL K+P
Sbjct: 60 -NPQR----LYALVITPTRELAFQISEQFEALGSSIGIKCAVIVGGVDLMTQSLALTKKP 114
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HIV+ATPGRL+DHL NTKGFSL +LKYL++DEADR+LN DFE+ +++IL VIP+ R TYL
Sbjct: 115 HIVIATPGRLVDHLENTKGFSLRSLKYLIMDEADRILNMDFEEEVNKILKVIPKERSTYL 174
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKV KLQRA LKNPVK+E ++K+ TV+ L+Q Y F+P K+KDCYLV IL +++
Sbjct: 175 FSATMTKKVAKLQRASLKNPVKVEVSTKFQTVEKLQQSYIFIPNKFKDCYLVSILNDLAG 234
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S ++F TC+ + + L+LR+LG A+P+ G M+Q+KRLGALNK+K+ ILI TDVA
Sbjct: 235 NSFIIFCGTCNNVQRVCLLLRHLGFHAVPLHGQMTQAKRLGALNKYKSKSRTILIATDVA 294
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y +IE+LIG
Sbjct: 295 SRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRIEQLIG 354
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKK 431
KKLP P EEEV+LL+ERVTEA+R ++M +K ++ +RK D DD+ I+KK
Sbjct: 355 KKLPLHPMVEEEVMLLVERVTEAQRYAKMELKQV-HETKRKTIDIDDEENSTEKISKK 411
>gi|125559478|gb|EAZ05014.1| hypothetical protein OsI_27195 [Oryza sativa Indica Group]
Length = 414
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/390 (64%), Positives = 319/390 (81%), Gaps = 5/390 (1%)
Query: 26 VGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFA 85
+GWK P++IQAEAIP AL+G+D+IG+ QTGSGKT AFALPI+QALLE P F A
Sbjct: 1 MGWKAPTRIQAEAIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHR----PRFLA 56
Query: 86 CVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMD 145
CVL+PTRELAIQI++QFEALGS ISL+C+VL+GG+ QT++L KRPH+VV TPGRL+D
Sbjct: 57 CVLAPTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLD 116
Query: 146 HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKL 205
HLTNTKGFS LKYLVLDEAD LL DF+K++D+ILNVIP+ R+T+LFSATMT+KVKKL
Sbjct: 117 HLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKL 176
Query: 206 QRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDA 265
+RACLKNPVK+E ASKYS VDTL+Q VPAKYKDCYL+++L ++ S MVF RTC++
Sbjct: 177 RRACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCES 236
Query: 266 TRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMV 325
TRLLALMLRNL +AI ISG MSQ KRLGALN+F+ +CNIL+CTDVASRGLDI VD+V
Sbjct: 237 TRLLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVV 296
Query: 326 INYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI-GKKLPEFPAEEE 384
INYD P NSKDYIHRVGRTARAG++G A+SLVNQ+E E++ E+ + G+++P + +
Sbjct: 297 INYDFPLNSKDYIHRVGRTARAGQSGYAVSLVNQFEGEFFKLTEQFLGGEEIPARKVDAD 356
Query: 385 EVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
E+++L ER+ ++KRI+ T+ +SG +R +
Sbjct: 357 EIMILHERIYDSKRIALKTMNESGYHKRMR 386
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/439 (60%), Positives = 342/439 (77%), Gaps = 10/439 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ TF+ELG+ D L EAC + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAF
Sbjct: 32 HEEDTGTFQELGVVDVLCEACAELKWKHPSKIQKEAIPVALQGKDIIGLAETGSGKTGAF 91
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQALLE QR +FA +L+PTRELA QISEQFEALG+ I ++CAV+VGG+DM
Sbjct: 92 ALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDM 145
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L L K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 146 VAQALILSKKPHIIIATPGRLVDHLENTKGFNLKALKYLVMDEADRILNMDFEVEVDKIL 205
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+TYLFSATMTKKV+KLQRA L++PVK+E ++KY TV+ L+Q Y F+P K+KD
Sbjct: 206 RVIPRERRTYLFSATMTKKVQKLQRASLQDPVKVEVSTKYQTVEKLQQYYIFIPVKFKDV 265
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLV+IL E++ +S +VF TC +AL+LR LG A+P+ G MSQ KRL ALNKFK+
Sbjct: 266 YLVHILNELAGNSFIVFVSTCAGALRVALLLRALGVGAVPLHGQMSQQKRLAALNKFKSK 325
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
++LICTDVASRGLDIP VD+V+N DIP +SKDYIHRVGRTARAGR G AI+ V+QY++
Sbjct: 326 ARSVLICTDVASRGLDIPHVDVVVNLDIPLHSKDYIHRVGRTARAGRAGKAITFVSQYDV 385
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD----SGNKRRRKGGDE 418
E Y +IE+LIGK+LP + +E EV++L ERV EA+R++++ +K+ G++ +++G D
Sbjct: 386 ELYQRIEQLIGKQLPLYKTDENEVMVLQERVAEAQRLTKIEMKELEDKKGSRGKKRGADS 445
Query: 419 DDDIGRQFGINKKKLSKRK 437
DDD G+ ++ K K
Sbjct: 446 DDDTEEAVGVRRRIKGKNK 464
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/433 (60%), Positives = 335/433 (77%), Gaps = 10/433 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E+ +V TFK+LG+ D L + CE++ WK P+KIQ EAIP L+G+D+IGLA+TGSGKTGAF
Sbjct: 17 EDDKVVTFKDLGIVDVLCQTCESLKWKAPTKIQKEAIPLTLQGRDVIGLAETGSGKTGAF 76
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQALL+ QR +FA +L+PTRELA QISEQF+ALGS I ++ AV+VGG+DM
Sbjct: 77 ALPILQALLQ--NPQR----YFALILTPTRELAFQISEQFQALGSKIGVKTAVIVGGMDM 130
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L L K+PH+++ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE +D+IL
Sbjct: 131 MSQALLLAKKPHVIIATPGRLVDHLENTKGFNLKALKFLVMDEADRILNMDFEVEVDKIL 190
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T LFSATMT+KV+KLQRA L +PVK+E +SKY TVD L+Q Y F+P K+KD
Sbjct: 191 KVIPRERRTLLFSATMTQKVQKLQRASLHDPVKVEVSSKYQTVDKLQQYYLFIPVKFKDV 250
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLV I+ E++ ++ M+F TC T AL+LR LG AIP+ G MSQ+KRLGAL KF+A
Sbjct: 251 YLVSIINEMAGNTFMIFCGTCHNTLRTALLLRQLGFTAIPLHGQMSQNKRLGALTKFRAK 310
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 311 NRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 370
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG----GDE 418
E Y +IE+LIGKKLP F EE+EV+ L ERV EA+R S+M +K + +KG D+
Sbjct: 371 ELYQRIEQLIGKKLPLFKIEEDEVMTLQERVAEAQRNSKMEMKHISEMKGKKGIKRKTDD 430
Query: 419 DDDIGRQFGINKK 431
+DD G+ K+
Sbjct: 431 NDDTEESRGVRKR 443
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/405 (64%), Positives = 327/405 (80%), Gaps = 7/405 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+++ T+K+LGL + L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 60 AEEQKL-TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGA 118
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+D
Sbjct: 119 FALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 172
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+I
Sbjct: 173 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 232
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+PR R+T+LFSATMTKKVKKLQRA LK+PVKIE ++KY TV+ L+Q Y F+P KYKD
Sbjct: 233 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKIEVSNKYQTVEQLQQSYLFIPVKYKD 292
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFK
Sbjct: 293 VYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKT 352
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+LV+QY+
Sbjct: 353 KNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYD 412
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 413 IELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKD 457
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/405 (64%), Positives = 327/405 (80%), Gaps = 7/405 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+++ T+K+LGL + L +AC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 60 AEEQKL-TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGA 118
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE QR +FA VL+PTRELA QI EQFEALGSGI ++C V+VGG+D
Sbjct: 119 FALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 172
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+DEADR+LN DFE LD+I
Sbjct: 173 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 232
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY TV+ L+Q Y F+P KYKD
Sbjct: 233 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 292
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+ G MSQ+KRL ALNKFK
Sbjct: 293 VYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKT 352
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+LV+QY+
Sbjct: 353 KNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYD 412
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +KD
Sbjct: 413 IELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKD 457
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/421 (63%), Positives = 331/421 (78%), Gaps = 9/421 (2%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ D L EAC+ + WKTPSKIQ EA+P AL+GKD+IGLA+TGSGKTGAFALPILQALLE
Sbjct: 5 GVVDVLCEACDKLKWKTPSKIQTEALPVALQGKDVIGLAETGSGKTGAFALPILQALLET 64
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ FA VL+PTRELA QI+EQFEALGS I + C V+VGG+DMM Q L L K+P
Sbjct: 65 PQR------LFALVLTPTRELAYQIAEQFEALGSTIGVSCVVIVGGIDMMTQALQLAKKP 118
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
H+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIP+ R+TYL
Sbjct: 119 HVMIATPGRLVDHLENTKGFNLRGLKYLVMDEADRILNMDFEAEIDKILKVIPKQRRTYL 178
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
+SATMTKKV KLQRA L++PVK+E ++KY TV L+Q Y F+PAKYKDCYLV IL E +
Sbjct: 179 YSATMTKKVAKLQRASLQDPVKVEVSTKYQTVSKLQQSYIFIPAKYKDCYLVSILNEFAG 238
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S MVF TC+ T+ +AL+LRNLG AIP+ G +SQSKRLG LNKFK+ +ILI TDVA
Sbjct: 239 NSFMVFCSTCNNTQRVALLLRNLGLTAIPLHGQLSQSKRLGTLNKFKSKSRSILIATDVA 298
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD VIN+DIPT+SKDYIHRVGRTARAGR G AI+ V QY++E Y +IE+LI
Sbjct: 299 SRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRAGKAITFVTQYDVELYQRIEQLID 358
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGDEDDDIGRQFGINK 430
KKLP F EEEEV++L+ERVTEA+R ++M ++DS K+ R +G D +D G+ K
Sbjct: 359 KKLPLFKTEEEEVMMLMERVTEAQRYAKMEMRDSDEKKKGGRSRGRDSKEDSEEFTGVRK 418
Query: 431 K 431
+
Sbjct: 419 R 419
>gi|384487072|gb|EIE79252.1| hypothetical protein RO3G_03957 [Rhizopus delemar RA 99-880]
Length = 462
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/407 (61%), Positives = 323/407 (79%), Gaps = 6/407 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LG+ EL EACE + +K P++IQ E+IP A+EG+D+IGLAQTGSGKT AFA+PI+Q
Sbjct: 25 FSDLGVSKELCEACEKMNFKHPTEIQKESIPWAIEGRDIIGLAQTGSGKTAAFAIPIIQR 84
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + AFFACVL+PTRELA QI+E FE+LGS I +RCAV+VGG+DMM Q++AL
Sbjct: 85 LWQNPQ------AFFACVLAPTRELAYQIAETFESLGSVIGVRCAVIVGGMDMMTQSIAL 138
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHI+V TPGRL DHL NTKGF+L LKYLV+DEADRLL+ DF +D+IL VIPR R
Sbjct: 139 AKRPHIIVCTPGRLQDHLENTKGFNLKHLKYLVMDEADRLLDLDFGPKIDQILKVIPRER 198
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
T+LFSATMT KV KLQRA L PVK+E A+KYSTV TL Q Y F P K+KDCY+VY+L
Sbjct: 199 NTFLFSATMTTKVAKLQRASLHKPVKVEVATKYSTVKTLLQYYLFFPLKHKDCYMVYLLN 258
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E++ +ST++FTRTC T+ +A+MLRNLG AIP+ G + Q+KRLGALNKFKAG NIL+
Sbjct: 259 ELAGNSTIIFTRTCSDTQKIAIMLRNLGFGAIPLHGQLPQAKRLGALNKFKAGARNILVA 318
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIP VD+VINYD+P +SKDYIHRVGRTARAGR+G +++ V QY++E +IE
Sbjct: 319 TDVASRGLDIPLVDVVINYDVPQSSKDYIHRVGRTARAGRSGKSVTFVTQYDVELIQRIE 378
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
K + +KL FP E++EV++L ERV EA+RI+ + ++++ N ++ K G
Sbjct: 379 KDLERKLDAFPVEKDEVMMLQERVDEAQRIATLELRETANGKKSKRG 425
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/400 (64%), Positives = 324/400 (81%), Gaps = 9/400 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKELG+ D L EACE + W+TPSKIQ EAIP AL+G+D+IGLA+TGSGKT AFALPILQ
Sbjct: 31 TFKELGVVDVLCEACEALKWRTPSKIQKEAIPVALQGRDIIGLAETGSGKTAAFALPILQ 90
Query: 69 ALLEIAENQRTVPA-FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
ALLE PA FA +L+PTRELA QISEQFEALGS I ++ AV+VGG+DMM Q +
Sbjct: 91 ALLE-------NPARLFALILTPTRELAFQISEQFEALGSTIGIKSAVIVGGIDMMTQAM 143
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L K+PH+V+ATPGRL+DHL NTKGF+L L+YLV+DEADR+LN DFE+ +D+IL VIPR
Sbjct: 144 MLAKKPHVVIATPGRLIDHLENTKGFTLKNLRYLVMDEADRILNMDFEEEVDKILKVIPR 203
Query: 188 -MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYL+SATMTKKV KLQRA L +PV++E ++KY TVD L+Q Y F+PAKYK+ +LV+
Sbjct: 204 ENRRTYLYSATMTKKVAKLQRASLTDPVRVEVSTKYQTVDKLQQYYLFIPAKYKEVHLVH 263
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L +++ S +VF TC+ T+ LALMLRNLG AIP+ G MSQ+KRLGAL KFKA NI
Sbjct: 264 LLQDLAGQSFIVFCATCNGTQKLALMLRNLGFTAIPLHGQMSQAKRLGALQKFKAQARNI 323
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIP VD+VINYDIPT+SKDYIHRVGRTARAGR+G A++ V+QY++E Y
Sbjct: 324 LLATDVAARGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGKAVTFVSQYDVELYQ 383
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+IE LIGK+LP++ E EVL+L ERV EA+R ++ +++
Sbjct: 384 RIEHLIGKQLPKYDVLEREVLVLEERVQEAQRFARQEMRE 423
>gi|325191409|emb|CCA26186.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 463
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 251/414 (60%), Positives = 322/414 (77%), Gaps = 6/414 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+TF++LG+ L EA ++GW PSKIQ EAIPH L G+DLIGLA+TGSGKTGAF +PIL
Sbjct: 29 QTFEQLGVDATLCEAIASLGWSKPSKIQQEAIPHGLAGRDLIGLAETGSGKTGAFVIPIL 88
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL R+ +A VL+PTRELA QISEQFEALG+ I L+CA +VGG+DMM Q +
Sbjct: 89 QSLL------RSPQRLYALVLAPTRELAYQISEQFEALGASIGLKCACVVGGIDMMNQQI 142
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL ++PHI++ATPGRL+DHL NTKGFSL T+K+LVLDEADR+L+ DFE+ +++I+ ++P
Sbjct: 143 ALARKPHIIIATPGRLVDHLENTKGFSLRTIKFLVLDEADRMLSMDFEEEINQIVQLMPS 202
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT KV KLQRA L NP+KIE K++T + L+Q Y F+PAK+KDCYL YI
Sbjct: 203 ERNTYLFSATMTSKVAKLQRASLLNPIKIEITHKFATPENLRQHYLFIPAKFKDCYLSYI 262
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L EV+ S ++F TC+ T+ + LMLRNLG +AI + G MSQ RLGALNKFKA IL
Sbjct: 263 LNEVAGQSILIFASTCNGTQKVTLMLRNLGFQAICLHGQMSQPNRLGALNKFKAKTRKIL 322
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+CTDVASRGLDIPSVD+V+NYDIPT+ KDYIHRVGRTARAGR G+A+S V QY++E Y +
Sbjct: 323 VCTDVASRGLDIPSVDVVMNYDIPTHGKDYIHRVGRTARAGRAGIAVSFVTQYDVELYQR 382
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
IE L+GKKL +P +E+ VL++ ERV EA+RI+ +K+ +KR ++ E DD
Sbjct: 383 IEFLLGKKLDAYPCDEQTVLIMQERVGEAQRIATNEMKELASKRGKRHDRESDD 436
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/443 (59%), Positives = 335/443 (75%), Gaps = 24/443 (5%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E+KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 14 AEEEEIKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 73
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 74 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 127
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 128 SMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 187
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 188 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 247
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 248 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 307
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SK I+ V QY+
Sbjct: 308 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSK----------XXXXXXXXITFVTQYD 357
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDE 418
+E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD
Sbjct: 358 VELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDTGDN 417
Query: 419 DDDIGRQFGINKK----KLSKRK 437
DD G G+ K K+ KRK
Sbjct: 418 DDTEG-ALGVRNKVAGGKMKKRK 439
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/425 (59%), Positives = 326/425 (76%), Gaps = 14/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F ELG+ L +AC+ +GW PSKIQ A+PHAL+GKD+IGLA+TGSGKTGAFA+P+L
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL+ + AFF VL+PTRELA QI +QFEALGSGI L AV+VGGVDM Q +
Sbjct: 104 QSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAM 157
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++DEADR+LN DFE LD+IL VIPR
Sbjct: 158 ALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPR 217
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+TYLFSATMTKKV KL+RA L++P ++ +S+Y TVD LKQ Y FVP KYK+ YLVY+
Sbjct: 218 ERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYL 277
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + +S +VF TC T +A+MLR LG +A+P+ G MSQ KRLG+LNKFK+ IL
Sbjct: 278 LNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREIL 337
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRTARAGR+G+AI++V QY++E Y +
Sbjct: 338 VCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQK 397
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD------SGNKRRRKG--GDED 419
IE +GKKL E+ E EV++L+ER EA +++ +K+ SG KRR+ GD +
Sbjct: 398 IEANLGKKLDEYKCVENEVMVLVERTQEATENARIEMKEMDEKKKSGKKRRQNDDFGDTE 457
Query: 420 DDIGR 424
+ GR
Sbjct: 458 ESGGR 462
>gi|170046412|ref|XP_001850760.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869183|gb|EDS32566.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 438
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/404 (63%), Positives = 322/404 (79%), Gaps = 10/404 (2%)
Query: 13 LGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE 72
+GL D L EAC+ + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPILQALLE
Sbjct: 1 MGLIDTLCEACKALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLE 60
Query: 73 IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKR 132
QR +FA +L+PTRELA QISEQFEALG+ I ++C V+VGG+DM+ Q L L ++
Sbjct: 61 --NPQR----YFAVILTPTRELAYQISEQFEALGASIGVKCCVIVGGMDMVSQALQLARK 114
Query: 133 PHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTY 192
PHI++ATPGRL+DHL NTKGF+L +KYLV+DEADR+LN DFE LD+IL V+PR R+T+
Sbjct: 115 PHIIIATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELDKILKVLPRERRTF 174
Query: 193 LFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS 252
LFSATMTKKVKKL+RA LK+PVK+E +SKY TV+ L Q Y F+PAK+KD YLV+IL E++
Sbjct: 175 LFSATMTKKVKKLERASLKDPVKVEVSSKYQTVEKLLQYYVFIPAKFKDVYLVHILNELA 234
Query: 253 ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDV 312
+S M+F TC+ T ALMLR LG A+P+ G MSQ+KRL +LNKFK + ILI TDV
Sbjct: 235 GNSFMIFCSTCNNTVRTALMLRALGLAAVPLHGQMSQNKRLASLNKFKGKDRQILISTDV 294
Query: 313 ASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI 372
ASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR G A++ V QY++E Y +IE L+
Sbjct: 295 ASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRTARAGRAGKAVTFVTQYDVELYQRIEHLL 354
Query: 373 GKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD----SGNKRR 412
GKKLPEF EE+EV+ L ERV EA+R +++ +KD G KR+
Sbjct: 355 GKKLPEFKCEEDEVMALQERVGEAQRTARLELKDIEERKGMKRK 398
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/434 (60%), Positives = 337/434 (77%), Gaps = 12/434 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
+K LGL D L C + W P+KIQ EAIP LEGKD+IGLA+TGSGKT AFALPILQA
Sbjct: 4 WKALGLVDTLCTTCIQLKWNEPTKIQREAIPLVLEGKDVIGLAETGSGKTAAFALPILQA 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LLE QR +FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+DM Q L L
Sbjct: 64 LLE--NPQR----YFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMHAQGLLL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K+PHI++ATPGRL+DHL NTKGF+L +K+L++DEADR+LN DFE +++IL V+PR R
Sbjct: 118 EKKPHIIIATPGRLVDHLENTKGFNLRQIKFLIMDEADRILNMDFEVEVNKILRVMPRER 177
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YLV+IL
Sbjct: 178 RTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILN 237
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E++ ++ M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KF+A +ILI
Sbjct: 238 ELAGNNFMIFCGTCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFRAKNRSILIS 297
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ + QY++E Y +IE
Sbjct: 298 TDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFITQYDVELYQRIE 357
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-SGNK---RRRKGGDEDDDIGRQ 425
+LI K+LP +P EEEEV+LL ERV+EA+RI +M +K+ NK +R++G + +DD +
Sbjct: 358 QLISKQLPLYPTEEEEVMLLQERVSEAQRIVKMDMKNIEENKKLGKRKRGSNNEDDTEQS 417
Query: 426 FGINK--KKLSKRK 437
G+ K K SKRK
Sbjct: 418 IGVRKRMKVKSKRK 431
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/428 (61%), Positives = 337/428 (78%), Gaps = 11/428 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LGL D L + C ++ WK P++IQ EAIP L+GKD+IGLA+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGLVDILCKTCLDLKWKEPTRIQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQ 78
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA +L+PTRELA QISEQF+ALGS I ++ VLVGG+DM Q +
Sbjct: 79 ALLE--NPQR----YFALILTPTRELAFQISEQFDALGSSIGVKTVVLVGGMDMHAQGMI 132
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 133 LEKKPHIIIATPGRLVDHLENTKGFNLRQLKFLVMDEADRILNMDFEVEVDKILRVIPRE 192
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YLV+IL
Sbjct: 193 RRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHIL 252
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S M+F TC+ T AL+LRNLG A+P+ G M+Q+KR+ AL KFKA +ILI
Sbjct: 253 NELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPLHGQMTQNKRIAALTKFKAKNRSILI 312
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y +I
Sbjct: 313 STDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRI 372
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK-----RRRKGGDEDDDIG 423
E+LI K+LP FP EEEEV+LL ERV+EA+RI +M +K+ + R+++GGDEDDD
Sbjct: 373 EQLISKQLPLFPTEEEEVMLLQERVSEAQRIVKMDMKNMEDNKKSGKRKKRGGDEDDDTE 432
Query: 424 RQFGINKK 431
+ G+ K+
Sbjct: 433 QSIGVRKR 440
>gi|388502288|gb|AFK39210.1| unknown [Lotus japonicus]
Length = 460
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/423 (62%), Positives = 328/423 (77%), Gaps = 15/423 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL D L EACE +GWK PSKIQ EA+P A + +D+IGLA+TGSGKTGAFALPILQ
Sbjct: 11 TFKSLGLNDALCEACEKLGWKNPSKIQCEALPIAFQKRDIIGLAETGSGKTGAFALPILQ 70
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALL A QR FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+DMM Q++A
Sbjct: 71 ALL--ATPQR----LFALVLTPTRELAYQISEQFEALGSSIGVKCAVIVGGMDMMSQSIA 124
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP-- 186
L K+PHIV+ATPGRL+DHL NTKGFSL +++YLV+DEADR+LN DFE LD+IL ++P
Sbjct: 125 LAKKPHIVIATPGRLVDHLENTKGFSLRSIQYLVMDEADRILNMDFEVDLDKILKILPPS 184
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R TYL+SATMTKKV KLQRA L++P+KIE + KY+TVD L+Q Y F+P+K+KD YLV
Sbjct: 185 STRSTYLYSATMTKKVAKLQRASLRDPIKIEVSDKYATVDKLQQTYLFIPSKFKDVYLVS 244
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
IL ++S S +VF TC T LAL+ RNLG +P+ G MSQ+KRLGALNKFK +I
Sbjct: 245 ILNDMSGKSIIVFASTCTTTLRLALLTRNLGFTTVPLHGQMSQTKRLGALNKFKGKARSI 304
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVASRGLDIP VD+VINYDIP +SKDYIHRVGRTARAGR+G +I+ V QY++E Y
Sbjct: 305 LIATDVASRGLDIPHVDVVINYDIPNHSKDYIHRVGRTARAGRSGKSITFVTQYDIELYQ 364
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRRKGGDED 419
+IE LIGK+LP++ +E+EV+ LLERV EA R +++ + KD KR++K +
Sbjct: 365 RIEFLIGKQLPQYVTQEDEVMTLLERVNEADRQARIQMKEIEDERKDHRQKRKKKEQNNH 424
Query: 420 DDI 422
DDI
Sbjct: 425 DDI 427
>gi|170583206|ref|XP_001896476.1| ATP-dependent RNA helicase T26G10.1 in chromosome III [Brugia
malayi]
gi|158596304|gb|EDP34674.1| ATP-dependent RNA helicase T26G10.1 in chromosome III, putative
[Brugia malayi]
Length = 462
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/406 (61%), Positives = 319/406 (78%), Gaps = 6/406 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++LG+ D L EAC+ + WK P+K+Q A+PHA + +D+IGLA+TGSGKT AFA+PILQ
Sbjct: 25 TFQKLGVTDVLCEACDRLNWKKPTKVQIAALPHAFKKRDIIGLAETGSGKTAAFAIPILQ 84
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE + FA VL+PTRELA QI EQFEALG+ I + AV+VGGVD + Q+LA
Sbjct: 85 ALLETPQK------LFALVLTPTRELAFQIGEQFEALGASIGILIAVIVGGVDTVTQSLA 138
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPH++VATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE L++IL VIP+
Sbjct: 139 LAKRPHVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFEVELEKILKVIPKE 198
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+TYL+SATMTKKV KL+RA L +PV+IE +SKY TVD LKQ Y F+P KYK+ YL+YIL
Sbjct: 199 RRTYLYSATMTKKVAKLERASLNDPVRIEVSSKYQTVDKLKQYYIFIPYKYKEAYLIYIL 258
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ + +VF TC + ALMLR LG A+P+ G MSQ+KRLG+LNKFK+ +L+
Sbjct: 259 NEMAGQTAIVFCSTCASALKTALMLRKLGFGAVPLHGQMSQAKRLGSLNKFKSKASTVLV 318
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
CTDVASRGLDIP VD+V+NYD+PT SKDY+HRVGRTARAGR+GVAI+ V QY++E Y +I
Sbjct: 319 CTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTARAGRSGVAITFVTQYDVEIYQKI 378
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
E+LIGKKLP F E +V+LL+ERV EA+++++ +K+ K+ RK
Sbjct: 379 ERLIGKKLPLFETVENDVMLLVERVEEAQKLAKQEMKEMEEKKGRK 424
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 251/424 (59%), Positives = 328/424 (77%), Gaps = 8/424 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE V TF++LG+ ++VEAC+ +G+K P++IQ +AIP AL GKD++GLAQTGSGKT AF
Sbjct: 8 EEDTVVTFEKLGVDPQIVEACKKLGFKNPTEIQRKAIPEALAGKDIVGLAQTGSGKTAAF 67
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
++P+LQALL F VL+PTRELA+QIS+Q EALG+ I ++CAVLVGG+D
Sbjct: 68 SIPMLQALLAKPS------GLFGLVLAPTRELAVQISDQIEALGAVIGVKCAVLVGGIDT 121
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q++AL K+PHI+V TPGR++ HL NTKGF+L TLKY V+DEADRLL DFE+ ++ IL
Sbjct: 122 MSQSMALAKKPHIIVGTPGRVVYHLENTKGFNLKTLKYFVMDEADRLLGMDFEEEINTIL 181
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R T+LFSATMT KV KLQRA L +PVKI+ A+KYSTVDTL+Q+Y F+P K+K+C
Sbjct: 182 KVIPKDRNTFLFSATMTSKVAKLQRASLNDPVKIQVATKYSTVDTLQQEYIFIPYKHKEC 241
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL YIL E++ +S ++FT TC A+ LA+MLRNL +AIPI+G M QSKRL +LNKFKA
Sbjct: 242 YLTYILNELAGNSVIIFTSTCAASTKLAIMLRNLSFKAIPINGQMDQSKRLSSLNKFKAQ 301
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVA+RGLDIPSVD+VINYD+P +SK+Y+HRVGRTARAGRTG A++LV QY++
Sbjct: 302 TMDILVATDVAARGLDIPSVDLVINYDVPVSSKEYMHRVGRTARAGRTGRAVTLVTQYDV 361
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG--NKRRRKGGDEDD 420
E YL+IE + +KL EFP E+E VL+ ERV EA R++ IK++G K +R D +
Sbjct: 362 EIYLRIEHALEQKLEEFPTEQESVLVFSERVNEAIRVATNEIKEAGLSEKEKRSMDDSEQ 421
Query: 421 DIGR 424
G
Sbjct: 422 STGH 425
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/398 (64%), Positives = 318/398 (79%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+ +LGL D L +ACE + WKTPSKIQ E+IP AL+GKD+IGLA+TGSGKT AFALPILQ
Sbjct: 40 TWSDLGLVDVLCKACEQLKWKTPSKIQRESIPVALQGKDIIGLAETGSGKTAAFALPILQ 99
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE + FA +L+PTRELA QISEQFEALGSGI ++ V+VGG+DM Q L
Sbjct: 100 ALLENPQRH------FALILTPTRELAFQISEQFEALGSGIGVKSIVIVGGLDMTSQALM 153
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL+NTKGF+L LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 154 LAKKPHIIIATPGRLVDHLSNTKGFNLRALKFLVMDEADRILNMDFEAEVDKILKVIPRE 213
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMTKKV KLQRACL++PV++E ++KY TV+ L Q Y F+PAK+KD YLV+IL
Sbjct: 214 RRTFLFSATMTKKVNKLQRACLQDPVRVEVSTKYQTVEKLLQYYVFIPAKFKDVYLVHIL 273
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E + +S MVF TC+ T AL+LRNLG A+P+ G MSQ+KRL AL KFKA +ILI
Sbjct: 274 NENAGNSFMVFCSTCNNTIRTALLLRNLGFTAVPLHGQMSQNKRLAALTKFKAKNRSILI 333
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIP +SKDYIHRVGRTARAGR+G AI+ V QY++E Y +I
Sbjct: 334 STDVASRGLDIPHVDIVINFDIPMHSKDYIHRVGRTARAGRSGKAITFVTQYDVELYQRI 393
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E LIGK+LP + EEEEV+ L ERV E++RI++ ++D
Sbjct: 394 EHLIGKQLPLYKTEEEEVMGLQERVEESQRIAKTELRD 431
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/425 (59%), Positives = 325/425 (76%), Gaps = 14/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF ELG+ L +AC +GW PSKIQ A+PHAL+GKD+IGLA+TGSGKTGAFA+P+L
Sbjct: 44 KTFAELGVSQPLCDACHRLGWVKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL+ + AFF VL+PTRELA QI +QFEALGSGI L AV+VGGVDM Q +
Sbjct: 104 QSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAM 157
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++DEADR+LN DFE LD+IL VIPR
Sbjct: 158 ALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPR 217
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+TYLFSATMTKKV KL+RA L++P ++ +++Y TVD LKQ Y FVP KYK+ YLVY+
Sbjct: 218 ERRTYLFSATMTKKVSKLERASLRDPARVSISTRYKTVDNLKQHYIFVPNKYKETYLVYL 277
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + +S +VF TC T +A+MLR LG +A+P+ G MSQ KRLG+LNKFK+ IL
Sbjct: 278 LNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREIL 337
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRTARAGR+G+AI++V QY++E Y +
Sbjct: 338 VCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAITVVTQYDVEAYQK 397
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD------SGNKRRRKG--GDED 419
IE +GKKL E+ E EV++L+ER EA +++ +K+ SG KRR+ GD +
Sbjct: 398 IEANLGKKLDEYKCVENEVMVLVERTQEAMENAKIEMKEMDEKRKSGKKRRQNDDFGDTE 457
Query: 420 DDIGR 424
+ GR
Sbjct: 458 ESSGR 462
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/412 (60%), Positives = 321/412 (77%), Gaps = 6/412 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E+ + TF++LG+ D L EAC+ + WK P+K+Q A+PHA + +D+IGLA+TGSGKT AF
Sbjct: 19 EQNDDITFQQLGVTDVLCEACDRLNWKKPTKVQIAALPHAFKKRDIIGLAETGSGKTAAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PILQALLE + FA VL+PTRELA QI EQFEALG+ I + AV+VGGVD
Sbjct: 79 AIPILQALLETPQK------LFALVLTPTRELAFQIGEQFEALGASIGILIAVIVGGVDT 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+LAL KRPH++VATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +++IL
Sbjct: 133 VTQSLALAKRPHVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFEVEVEKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R+TYL+SATMTKKV KL+RA L +PV+IE +SKY TVD LKQ Y F+P KYK+
Sbjct: 193 KVIPKERRTYLYSATMTKKVAKLERASLNDPVRIEVSSKYQTVDKLKQYYIFIPYKYKEA 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ + +VF TC + ALMLR LG A+P+ G MSQ+KRLG+LNKFK+
Sbjct: 253 YLVYILNEMAGQTAIVFCSTCVSALRTALMLRKLGFGAVPLHGQMSQAKRLGSLNKFKSK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
LICTDVASRGLDIP VD+V+NYD+PT SKDY+HRVGRTARAGR+GVA++ V QY++
Sbjct: 313 TSTTLICTDVASRGLDIPHVDLVLNYDVPTQSKDYVHRVGRTARAGRSGVAVTFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
E Y +IE+LIGKKLP F E +V+LL+ERV EA+++++ +K+ K+ RK
Sbjct: 373 EIYQRIERLIGKKLPLFETVENDVMLLMERVEEAQKLAKREMKEMEEKKGRK 424
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/425 (59%), Positives = 326/425 (76%), Gaps = 14/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF ELG+ L +AC +GW PSKIQ A+PHALEGKD+IGLA+TGSGKTGAFA+P+L
Sbjct: 44 KTFAELGVSQPLCDACLRLGWTKPSKIQQAALPHALEGKDVIGLAETGSGKTGAFAIPVL 103
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL+ + AFF VL+PTRELA QI +QFEALGSGI L AV+VGGVDM Q +
Sbjct: 104 QSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAM 157
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++DEADR+LN DFE LD+IL VIP+
Sbjct: 158 ALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPK 217
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+TYLFSATMTKKV KL+RA L++P ++ +++Y TVD LKQ Y F+P KYK+ YLVY+
Sbjct: 218 ERRTYLFSATMTKKVSKLERASLRDPARVSISTRYKTVDNLKQHYIFIPNKYKETYLVYL 277
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + +S +VF TC T +A+MLR LG +A+P+ G MSQ KRLG+LNKFK+ IL
Sbjct: 278 LNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREIL 337
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRTARAGR+G+AI++V QY++E Y +
Sbjct: 338 VCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAITVVTQYDVEAYQK 397
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD------SGNKRRRKG--GDED 419
IE +GKKL E+ E EV++L+ER EA +++ +K+ SG KRR+ GD +
Sbjct: 398 IEANLGKKLDEYKCVENEVMVLVERTQEAMENAKVEMKEMDEKRKSGKKRRQNDDFGDTE 457
Query: 420 DDIGR 424
++ GR
Sbjct: 458 ENSGR 462
>gi|402590562|gb|EJW84492.1| DEAD box ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 462
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/412 (59%), Positives = 322/412 (78%), Gaps = 6/412 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E+ + TF++LG+ D L EAC+ + WK P+K+Q A+PHA + +D+IGLA+TGSGKT AF
Sbjct: 19 EQNDDITFQKLGVTDVLCEACDRLNWKKPTKVQIAALPHAFKKRDIIGLAETGSGKTAAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PILQALLE + FA VL+PTRELA QI EQFEALG+ I + AV+VGG+D
Sbjct: 79 AIPILQALLETPQK------LFALVLTPTRELAFQIGEQFEALGASIGILIAVIVGGIDT 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+LAL KRPH++VATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE L++IL
Sbjct: 133 VTQSLALAKRPHVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFEVELEKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R+TYL+SATMTKKV KL+RA L +PV+IE +SKY TVD LKQ Y F+P KYK+
Sbjct: 193 KVIPKERRTYLYSATMTKKVAKLERASLVDPVRIEVSSKYQTVDKLKQYYIFIPYKYKEA 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+YIL E++ + +VF TC + ALMLR LG A+P+ G MSQ+KRLG+LNKFK+
Sbjct: 253 YLIYILNEMAGQTAIVFCSTCASALKTALMLRKLGFGAVPLHGQMSQAKRLGSLNKFKSK 312
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+L+CTDVASRGLDIP VD+V+NYD+PT SKDY+HRVGRTARAGR+GVA++ V QY++
Sbjct: 313 ASTVLVCTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTARAGRSGVAVTFVTQYDV 372
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
E Y +IE+LIGKKLP F E +V+LL+ERV EA+++++ +K+ K+ RK
Sbjct: 373 EIYQKIERLIGKKLPLFETVENDVMLLVERVEEAQKLAKQEMKEMEEKKGRK 424
>gi|320164743|gb|EFW41642.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 594
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/430 (58%), Positives = 331/430 (76%), Gaps = 13/430 (3%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+ TF+ LG+ LVEAC +G+K P+ IQ ++IP AL G+D+IGLA+TGSGKT +FA
Sbjct: 142 EEAPTTFQALGIVPSLVEACSRMGFKAPTPIQRQSIPVALTGRDIIGLAETGSGKTASFA 201
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LP+LQ LLE + FA +L+PTRELA QISEQFEALGS I ++C V+VGG+DM
Sbjct: 202 LPVLQKLLEKPQ------PLFALILTPTRELAYQISEQFEALGSTIGVKCCVIVGGMDMT 255
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K+PHI++ATPGR++DHL NTKG+ LK+L++DEADR+LN DFE+ +D+IL
Sbjct: 256 TQAIALSKKPHILIATPGRIVDHLENTKGY----LKFLIMDEADRILNMDFEEEVDKILK 311
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
IP+ R TYL+SATMT KV KLQRA L+NPVKIE A+KY TV TL QQY F+PA++KDCY
Sbjct: 312 AIPKERNTYLYSATMTSKVAKLQRASLRNPVKIEVATKYQTVGTLVQQYLFIPARFKDCY 371
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L Y L +++ +ST++FT TC + +ALMLRNLG AIP+ G ++Q KRLGALNKFK
Sbjct: 372 LTYALNQLAGNSTIIFTMTCANAQRVALMLRNLGFPAIPLHGQLTQPKRLGALNKFKEQS 431
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL+ TDVASRGLDIP VD+VINYDIPT+SKDYIHRVGRTARAGR+G +I++V QY++E
Sbjct: 432 RSILVATDVASRGLDIPHVDLVINYDIPTHSKDYIHRVGRTARAGRSGRSITMVTQYDVE 491
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR--RRKGGDEDDD 421
+ +IE+LI KK+ + +EEE+VL+LLER +EA+R++ ++D + R +R+G D DDD
Sbjct: 492 LFQRIEQLINKKMELYESEEEQVLMLLERTSEAQRMAITQMRDENDPRNGKRRGHDRDDD 551
Query: 422 I-GRQFGINK 430
RQ I K
Sbjct: 552 TEERQHNIGK 561
>gi|312370859|gb|EFR19169.1| hypothetical protein AND_22947 [Anopheles darlingi]
Length = 490
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/431 (60%), Positives = 323/431 (74%), Gaps = 16/431 (3%)
Query: 13 LGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE 72
LGL D L +AC + WK PSKIQ EAIP AL GKD+IGLA+TGSGKT AFALPILQALL+
Sbjct: 53 LGLVDTLCQACRALKWKVPSKIQREAIPLALNGKDIIGLAETGSGKTAAFALPILQALLD 112
Query: 73 IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKR 132
QR +FA VL+PTRELA QISEQFEALG+ I ++C V+VGG+D++ Q L L ++
Sbjct: 113 --NPQR----YFAVVLTPTRELAYQISEQFEALGTMIGVKCCVVVGGMDLVAQALQLARK 166
Query: 133 PHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTY 192
PHI++ATPGRL+DHL NTKGF L LKYLV+DEADR+LN DFE +++IL VIPR R+T+
Sbjct: 167 PHIIIATPGRLVDHLENTKGFGLKALKYLVMDEADRILNMDFEVEVNKILRVIPRERRTF 226
Query: 193 LFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS 252
LFSATMTKKVKKL+RA L++PVK+E +SKY TVD L Q Y F+PAKYKD YLV+IL E++
Sbjct: 227 LFSATMTKKVKKLERASLRDPVKVEVSSKYQTVDKLLQYYIFIPAKYKDVYLVHILNELA 286
Query: 253 ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDV 312
+S M+F TC+ T ALMLR LG A+P+ G M+Q+KRL ALNKFK+ ILI TDV
Sbjct: 287 GNSFMIFCSTCNNTVRTALMLRALGLAAVPLHGQMTQNKRLAALNKFKSQTRQILISTDV 346
Query: 313 ASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI 372
ASRGLDIP VD+V+N DIP +SKDYIHRVGRTARAGR G AI+ V QY++E Y +IE L+
Sbjct: 347 ASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRTARAGRAGQAITFVTQYDVELYQRIEHLL 406
Query: 373 GKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD----------EDDDI 422
KKLPE+ EE+EV+ L ERV EA+R ++M KD ++ KG DDD
Sbjct: 407 SKKLPEYKCEEDEVMALQERVAEAQRTARMEQKDIEERKASKGAKGKRGAATAAGSDDDD 466
Query: 423 GRQFGINKKKL 433
QF +K+L
Sbjct: 467 TEQFNGARKRL 477
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/431 (59%), Positives = 333/431 (77%), Gaps = 11/431 (2%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K++++LGL D L AC + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPIL
Sbjct: 56 KSWEDLGLIDTLCTACRGLKWKAPSKIQREAIPLALQGKDIIGLAETGSGKTGAFALPIL 115
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ QR +FA VL+PTRELA QISEQFEALG+ I ++C V+VGG+D++ Q +
Sbjct: 116 QALLD--NPQR----YFAVVLTPTRELAYQISEQFEALGATIGVKCCVIVGGMDLVTQAI 169
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++PHI++ATPGRL+DHL NTKGFSL ++YLV+DEADR+LN DFE+ +++IL V+PR
Sbjct: 170 QLARKPHIIIATPGRLVDHLENTKGFSLKAIRYLVMDEADRILNMDFEEEVNKILKVMPR 229
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKVKKL+RA L++PVK+E +SKY TV+ L Q Y F+PA+YK+ YLV++
Sbjct: 230 ERRTFLFSATMTKKVKKLERASLRDPVKVEVSSKYQTVEKLLQYYLFIPARYKNVYLVHV 289
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E++ +S M+F TC+ T ALMLR LG A+P+ G M+Q+KRL ALNKFK+ IL
Sbjct: 290 LNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPLHGQMTQNKRLAALNKFKSQARQIL 349
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TDVASRGLDIP VD+V+N DIP +SKDYIHRVGRTARAGR G AI+ V QY++E Y +
Sbjct: 350 ISTDVASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRTARAGRAGQAITFVTQYDVELYQR 409
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG-----DEDDDI 422
IE L+GKKLPE+ E++EV+ L ERV EA R +++ +D ++ KGG D D++
Sbjct: 410 IEHLLGKKLPEYKCEQDEVMALQERVAEAHRTARIEQRDIEERKASKGGKRGANDSDEED 469
Query: 423 GRQFGINKKKL 433
QF +K+L
Sbjct: 470 TEQFNGVRKRL 480
>gi|328771154|gb|EGF81194.1| hypothetical protein BATDEDRAFT_87448 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/431 (60%), Positives = 325/431 (75%), Gaps = 15/431 (3%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ EL+EAC +G+K PS IQ +IP AL G+D+IGLAQTGSGKT AFALPILQ L
Sbjct: 17 GIIPELIEACTTLGFKKPSDIQCASIPVALTGRDIIGLAQTGSGKTAAFALPILQTLFAN 76
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
++ +ACV++PTRELA QISEQFEALGS I +RCAV+VGG+DMM Q++AL K+P
Sbjct: 77 PQH------LYACVIAPTRELAFQISEQFEALGSVIGVRCAVIVGGMDMMSQSIALSKKP 130
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
H+++ TPGRL+DHL NTKGF+L LKYLV+DEADRLL+ DF ++++L VIPR R TYL
Sbjct: 131 HVIICTPGRLVDHLENTKGFNLKHLKYLVMDEADRLLDLDFGAEIEKVLKVIPRERNTYL 190
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMT KV+KLQRA L NPVK+E A+KYSTVDTL Q Y F P K K+CYL Y+L E+S
Sbjct: 191 FSATMTSKVEKLQRASLVNPVKVEVATKYSTVDTLLQYYTFFPYKQKECYLTYLLNELSG 250
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+ +VFT TC +T+ LALMLRNLG A+ + G ++Q KRLGAL KFK+G NILI TDVA
Sbjct: 251 QTCIVFTLTCASTQKLALMLRNLGFEAVCLHGQLTQPKRLGALAKFKSGGRNILIATDVA 310
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+VINYD+P +SKDYIHRVGRTARAGR+G +I+LV QY++EWY +IE I
Sbjct: 311 SRGLDIPGVDVVINYDVPQSSKDYIHRVGRTARAGRSGKSITLVTQYDVEWYQRIEHAIQ 370
Query: 374 KKLPEFP--AEEEEVLLLLERVTEAKRISQMTIKDS-----GNKRRRKGGDE--DDDIGR 424
KKL E+P ++ VL+L ERV+EA R + M +KD G+KR R G E DD+
Sbjct: 371 KKLTEYPFGHDKSAVLMLQERVSEAVRFAHMQLKDENLKHKGSKRGRGGDAEQRDDEESA 430
Query: 425 QFGINKKKLSK 435
+ K+K+ K
Sbjct: 431 AKHLTKRKIKK 441
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/416 (59%), Positives = 330/416 (79%), Gaps = 7/416 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A+ K KTFK+LG+ D L +AC ++G+KTP+ IQAE+IP AL+G+DL+GLA+TGSGKT A
Sbjct: 43 ADTKAPKTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAA 102
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL+E + +F VL+PTRELA+QISE FEALGS IS+RCAV+VGG+D
Sbjct: 103 FALPILQALMEKPQ------PYFGLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMD 156
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 157 MISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYK
Sbjct: 217 LKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYK 276
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV+IL E +T++FTRT + T+ L+++LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 277 DIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLHGQLSQSARLGALGKFR 336
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGRTARAG++G AIS+V QY
Sbjct: 337 SGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGKSGRAISVVTQY 396
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
E+E + +IE +GK+LPE E+EEV++L +RV +A+R++ +KD KR KG
Sbjct: 397 EVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTEMKDLHEKRGTKGA 452
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/437 (57%), Positives = 327/437 (74%), Gaps = 26/437 (5%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF ELG+ L +AC+ +GW PSKIQ A+PHAL+GKD+IGLA+TGSGKTGAFA+P+L
Sbjct: 54 KTFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 113
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL+ + AFF VL+PTRELA QI +QFEALGSGI L AV+VGGVDM Q +
Sbjct: 114 QSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAM 167
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++DEADR+LN DFE LD+IL VIP+
Sbjct: 168 ALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPK 227
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+TYLFSATMTKKV KL+RA L++P ++ +++Y TVD LKQ Y F+P KYK+ YLVY+
Sbjct: 228 ERRTYLFSATMTKKVSKLERASLRDPARVSVSTRYKTVDNLKQHYIFIPNKYKETYLVYL 287
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQ------------SKRLGA 295
L E + +S +VF TC +A+MLR LG +A+P+ G MSQ KRLG+
Sbjct: 288 LNEHAGNSAIVFCATCATAMQIAVMLRQLGMQAVPLHGQMSQVRFERPLQVGSLEKRLGS 347
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
LNKFK+ +IL+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRTARAGR+G+AI+
Sbjct: 348 LNKFKSKARDILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGLAIT 407
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD------SGN 409
+V QY++E Y +IE +GKKL E+ E EV++L+ER EA +++ +K+ SG
Sbjct: 408 VVTQYDVEGYQKIEANLGKKLDEYKCVENEVMVLVERTQEALENAKVEMKEMDEKRKSGK 467
Query: 410 KRRRKG--GDEDDDIGR 424
KRR+ GD +++ GR
Sbjct: 468 KRRQNDDLGDTEENSGR 484
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/420 (60%), Positives = 326/420 (77%), Gaps = 14/420 (3%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+E +K+FKELG+ D L EACEN+G+K P+ IQ E+IP ALEGKDLIGLA+TGSGKT A
Sbjct: 76 SETAPLKSFKELGVMDSLCEACENLGYKNPTSIQVESIPVALEGKDLIGLAETGSGKTAA 135
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FA+PILQAL + FAC+L+PTRELA QISEQFEALG GI +R AV+VGG+D
Sbjct: 136 FAIPILQALWD------NPTGLFACILAPTRELAFQISEQFEALGGGIGVRSAVIVGGMD 189
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
MM Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 190 MMTQSVALGKKPHILVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKI 249
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIP+ R+TYLFSATMT KV+KLQRA L +PV+I SKYSTV TL Q++ F+P K+KD
Sbjct: 250 LKVIPQTRRTYLFSATMTSKVEKLQRASLSSPVRISVGSKYSTVSTLIQKFLFIPFKHKD 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY++ E + +T++F RT T LA++LR+LG A+P++G MSQS RLGALNKFK+
Sbjct: 310 TYLVYLMNEFAGQTTIIFCRTVQETSRLAILLRHLGFNAVPLNGQMSQSARLGALNKFKS 369
Query: 302 GECNILICTDVASRGLDI---PSVDM--VINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
G NIL+ TDVA+RGLD+ P + V+N+D+ +SK YIHRVGRTARAGR+G +ISL
Sbjct: 370 GSRNILVATDVAARGLDMHVSPDALLYCVLNHDLAQDSKTYIHRVGRTARAGRSGRSISL 429
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
V QYE+E +L+IE +GKK+PEF +EE+VL+ ERV EA+R + +++ +R +KGG
Sbjct: 430 VTQYEVELFLRIEAALGKKIPEFDVQEEDVLIFSERVGEAQREAAKQLRE---EREKKGG 486
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/416 (60%), Positives = 328/416 (78%), Gaps = 7/416 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A+ K K+FK+LG+ D L +AC ++ +K P+ IQAE+IP AL+G+DL+GLA+TGSGKT A
Sbjct: 43 ADAKAPKSFKDLGIIDSLCDACTSLRYKAPTPIQAESIPLALQGRDLVGLAETGSGKTAA 102
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL+E + +F VL+PTRELA+QISE FEALGS IS+RCAV+VGG+D
Sbjct: 103 FALPILQALMEKPQ------PYFGLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMD 156
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 157 MISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYK
Sbjct: 217 LKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYK 276
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV+IL E ST++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 277 DVYLVHILNEFPGQSTIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSARLGALGKFR 336
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G NIL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGRTARAGR+G AIS+V QY
Sbjct: 337 SGSRNILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGRSGRAISIVTQY 396
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
E+E + +IE +GK+LPE E+EEV++L +RV +A+R++ +KD KR KG
Sbjct: 397 EVEIWQRIEVALGKQLPEHKTEKEEVMVLSDRVGDAQRMAVTEMKDLHEKRGTKGA 452
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/415 (59%), Positives = 330/415 (79%), Gaps = 7/415 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A+ K KTFK+LG+ D L +AC ++G+KTP+ IQAE+IP AL+G+DL+GLA+TGSGKT A
Sbjct: 43 ADTKAPKTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAA 102
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL+E + +F VL+PTRELA+QI+E FEALGS IS+RCAV+VGG+D
Sbjct: 103 FALPILQALMEKPQ------PYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMD 156
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 157 MISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYK
Sbjct: 217 LKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYK 276
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV+IL E +T++FTRT + T+ L+++LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 277 DIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLHGQLSQSARLGALGKFR 336
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGRTARAG++G AIS+V QY
Sbjct: 337 SGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGKSGRAISVVTQY 396
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
E+E + +IE +GK+LPE E+EEV++L +RV +A+R++ +KD KR KG
Sbjct: 397 EVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTEMKDLHEKRGTKG 451
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/373 (65%), Positives = 303/373 (81%), Gaps = 6/373 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A++ + TF LGL ELV ACE +GW+ PS IQ ++IP AL+G+D+IGLAQTGSGKTGA
Sbjct: 13 ADDDKKPTFASLGLCKELVSACEELGWREPSAIQQKSIPEALQGRDVIGLAQTGSGKTGA 72
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ+LL+ RT + + +LSPTRELAIQI+EQ EALG GI +R A LVGG++
Sbjct: 73 FALPILQSLLD---EPRT---YHSLILSPTRELAIQIAEQVEALGRGIGVRTATLVGGIE 126
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q + LGKRPH+VV TPGR++DHL NTKGF L LK LVLDEADRLLN DFE+ +D+I
Sbjct: 127 MTSQAIMLGKRPHVVVGTPGRVVDHLENTKGFGLKALKVLVLDEADRLLNLDFEEEIDKI 186
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIP+ R+T LFSATMT KV+KLQRACL++PVK+E ++KYSTVD+L+Q Y F+PAK+KD
Sbjct: 187 LRVIPQDRRTQLFSATMTSKVQKLQRACLRDPVKVEVSAKYSTVDSLRQHYLFIPAKHKD 246
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CY Y+ E+SAS+ +VF RTCD TR LAL+ RNLG A+PI G MSQ KR+ AL KFKA
Sbjct: 247 CYATYLFNELSASTLIVFARTCDQTRKLALIARNLGFGAVPIHGQMSQPKRIAALQKFKA 306
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
GE NILI TDVASRGLDIPSVD+VINYD+P NSKDY+HRVGRTARAGR+G+A+++V QY+
Sbjct: 307 GERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAVTMVTQYD 366
Query: 362 LEWYLQIEKLIGK 374
+E Y +IE+LI K
Sbjct: 367 VELYQKIERLINK 379
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/416 (59%), Positives = 329/416 (79%), Gaps = 7/416 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A+ K KTFK+LG+ D L +AC ++G+K P+ IQAE+IP AL+G+DL+GLA+TGSGKT A
Sbjct: 43 ADTKVPKTFKDLGIIDSLCDACTSLGYKAPTPIQAESIPLALQGRDLVGLAETGSGKTAA 102
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL+E + +F VL+PTRELA+QISE FEALGS IS+RCAV+VGG+D
Sbjct: 103 FALPILQALMEKPQ------PYFGLVLAPTRELAVQISESFEALGSLISVRCAVIVGGMD 156
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 157 MISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYK
Sbjct: 217 LKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYK 276
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV+IL E +T++FTRT + T+ L+++LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 277 DIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLHGQLSQSARLGALGKFR 336
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGRTARAG++G AIS+V QY
Sbjct: 337 SGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGKSGRAISVVTQY 396
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
E+E + +IE +GK+LPE E+EEV++L +RV +A+R++ +KD KR KG
Sbjct: 397 EVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTEMKDLHEKRGTKGA 452
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/418 (61%), Positives = 326/418 (77%), Gaps = 11/418 (2%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
GL D L + C ++ WK P++IQ EAIP L+GKD+IGLA+TGSGKT AFALPILQALLE
Sbjct: 1 GLVDTLCKTCIDLKWKEPTRIQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLE- 59
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ QR +FA +L+PTRELA QISEQF+ALGS + ++ VLVGG+DM Q + L K+P
Sbjct: 60 -QPQR----YFALILTPTRELAFQISEQFDALGSSMGVKTVVLVGGMDMHAQGMILEKKP 114
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HI++ATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DFE +D+IL VIPR R+T L
Sbjct: 115 HIIIATPGRLVDHLENTKGFNLRQLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLL 174
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKV+KLQRA L+NPV++E ++KY TV+ L+Q Y F+P K+KD YLV+IL E++
Sbjct: 175 FSATMTKKVQKLQRASLRNPVRVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAG 234
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFKA +ILI TDVA
Sbjct: 235 NSFMIFCGTCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKAKNRSILISTDVA 294
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
SRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y +IE+LI
Sbjct: 295 SRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRIEQLIS 354
Query: 374 KKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKK 431
K+LP +P EEEEV+LL ER + K I + K SG KR+R G +EDDD + G+ K+
Sbjct: 355 KQLPLYPTEEEEVMLLQER--DMKNIEEN--KKSG-KRKRGGNNEDDDTEQSIGVRKR 407
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/414 (59%), Positives = 329/414 (79%), Gaps = 7/414 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ K KTFK+LG+ D L +AC ++G+KTP+ IQAE+IP AL+G+DL+GLA+TGSGKT AF
Sbjct: 44 DTKAPKTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAAF 103
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL+E + +F VL+PTRELA+QI+E FEALGS IS+RCAV+VGG+DM
Sbjct: 104 ALPILQALMEKPQ------PYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDM 157
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL
Sbjct: 158 ISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKIL 217
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYKD
Sbjct: 218 KVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKD 277
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E +T++FTRT + T+ L+++LR LG AIP+ G +SQS RLGAL KF++
Sbjct: 278 IYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLHGQLSQSARLGALGKFRS 337
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGRTARAG++G AIS+V QYE
Sbjct: 338 GSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGKSGRAISVVTQYE 397
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+E + +IE +GK+LPE E+EEV++L +RV +A+R++ +KD KR KG
Sbjct: 398 VEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTEMKDLHEKRGSKG 451
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/402 (60%), Positives = 316/402 (78%), Gaps = 7/402 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E TF +LG+ +++EAC +G+K P++IQ E+IPHA+ G+D+IGLAQTGSGKT AFA+P
Sbjct: 80 ENTTFDQLGMHPQIIEACVRMGFKKPTEIQRESIPHAIAGRDIIGLAQTGSGKTAAFAIP 139
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ LL+ + FA +LSPTRELA QIS+QFEALG+ I ++C VLVGG+D+MQQ
Sbjct: 140 ILQQLLQSPQ------PLFALILSPTRELAFQISQQFEALGAVIGVKCGVLVGGMDVMQQ 193
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L ++PHI+V TPGR+M HL NTKGF L LK+LV+DEADRLL+ DFE+ +++IL VI
Sbjct: 194 AMVLARKPHIIVGTPGRVMYHLENTKGFHLKALKFLVMDEADRLLSMDFEEEINKILKVI 253
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYL 244
P+ R TYLFSATMT KV KLQ+A L NP+K++ AS KYSTVDTL QQY F+P ++KDCYL
Sbjct: 254 PKNRNTYLFSATMTSKVAKLQKASLVNPIKVQVASTKYSTVDTLVQQYCFIPYQHKDCYL 313
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
YIL E+S +S +VF TC A+ L++MLRNLG AIPI+G+M Q+KRL +LNKFK+
Sbjct: 314 TYILNELSGNSAIVFVATCAASNRLSVMLRNLGLGAIPINGNMDQTKRLASLNKFKSSVK 373
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NIL+ TDVA+RGLDIPSV +V+NYDIP NSK+Y+HRVGRTARAG++G AI+LV QY++E
Sbjct: 374 NILVATDVAARGLDIPSVGLVVNYDIPVNSKEYVHRVGRTARAGQSGRAITLVTQYDVEV 433
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
Y +IE + KKL EFP+E VL+ LE V EA R++ + +K+
Sbjct: 434 YQRIEFALSKKLEEFPSESSSVLVFLEAVNEAARLASLEVKE 475
>gi|146163668|ref|XP_001012102.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146145909|gb|EAR91857.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 533
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/419 (59%), Positives = 318/419 (75%), Gaps = 6/419 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EEKE TF+ LG+ +ELVEAC + + P+ IQ E++ + L+ +D+I LA+TGSGKT AF
Sbjct: 91 EEKEDVTFQSLGVCEELVEACNRLKYVKPTAIQRESLVYTLKQRDIIALAETGSGKTLAF 150
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP++Q LL+ + F+A VLSPTREL +QI+E FEALG GISL+ V+VGG+D
Sbjct: 151 ALPVIQNLLDAPQ------PFYALVLSPTRELCMQIAEHFEALGVGISLKTTVIVGGLDP 204
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q +AL K+PHI++ TPGR++ H+ NTKGF+ LK+LVLDEAD+LLN DFEK +++IL
Sbjct: 205 MAQAIALSKKPHIIIGTPGRILYHMQNTKGFNFKALKFLVLDEADKLLNMDFEKDINQIL 264
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
++IP+ R T+LFSATMT KV KLQRA LK+PVKIE +SKY V TL QY F+PAKYKDC
Sbjct: 265 DIIPKKRNTFLFSATMTNKVHKLQRASLKDPVKIEVSSKYQMVSTLVAQYAFIPAKYKDC 324
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVY L E + +++++F +TC L LMLRNLG A+ I G MSQ KRLGA+NKFK+G
Sbjct: 325 YLVYSLNEFAGNTSIIFVQTCLNAIKLTLMLRNLGFSAVTIHGQMSQVKRLGAINKFKSG 384
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
E IL+ TDVASRGLDIPSVD+VINYDIPTN+K+Y+HRVGRTARAGR G AIS V QY++
Sbjct: 385 EKKILVATDVASRGLDIPSVDLVINYDIPTNAKEYVHRVGRTARAGRAGKAISFVTQYDV 444
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
E YL+IE LIGKKL ++ EE +VL+ ERV EA+RI+ IK+ K+ D DD+
Sbjct: 445 EMYLKIEALIGKKLDQYKCEEYQVLVFNERVQEAQRIAAQEIKEIMEKKNNPLHDVDDE 503
>gi|213410545|ref|XP_002176042.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212004089|gb|EEB09749.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 461
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/431 (60%), Positives = 331/431 (76%), Gaps = 10/431 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E+ E TFKELG+ DE+ EACE + +K PS IQ EAIP AL+ +D+IGLAQTGSGKT AF
Sbjct: 37 EQVEGVTFKELGVIDEICEACEKLNFKAPSAIQKEAIPAALKQQDIIGLAQTGSGKTAAF 96
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+P++QAL E P FF VL+PTRELA QISEQFEALG + ++ V+VGG+DM
Sbjct: 97 AIPVIQALWE-----NPCP-FFGVVLAPTRELAYQISEQFEALGGAMGVKSVVIVGGMDM 150
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +A+ K+PHI+V TPGRLMDHL NTKGFSL LKYLV+DEADRLL+ DF +D+IL
Sbjct: 151 VTQAVAISKKPHILVCTPGRLMDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPIIDKIL 210
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R+T+LFSATMT KV+KLQRA L NPV+I +SK+STVDTL Q+Y F P K+KD
Sbjct: 211 KVIPKERRTFLFSATMTSKVEKLQRASLHNPVRIAVSSKFSTVDTLLQKYLFFPFKHKDT 270
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYI+ E++ S ++FTRT + T+ +A++LR+LG AIP+ G +SQS RLGALNKFK+G
Sbjct: 271 YLVYIVNEMAGQSMIIFTRTVNDTQRVAILLRSLGFSAIPLHGQLSQSSRLGALNKFKSG 330
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVA+RGLDIP VD VINYDIPT+SK YIHRVGRTARAGR+G +I+LV QY+L
Sbjct: 331 ARSILVATDVAARGLDIPLVDAVINYDIPTDSKAYIHRVGRTARAGRSGKSIALVTQYDL 390
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR----RRKGGDE 418
E +L+IE I KK+ E+ A +E+VLLL ERV EA+R + + +K+ KR R KG +
Sbjct: 391 EPFLRIEAAIQKKMEEYDAPKEDVLLLSERVGEAQREAIIQMKEIHEKRKMKGRGKGKRK 450
Query: 419 DDDIGRQFGIN 429
DD+ R+ I+
Sbjct: 451 HDDMDREEQID 461
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/432 (58%), Positives = 324/432 (75%), Gaps = 7/432 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A + V TF+ LG+ D L E C+ +GWK PSKIQ EAIP AL+G D+IGLA+TGSGKTGA
Sbjct: 14 ASTEAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDVIGLAETGSGKTGA 73
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
F +P+LQALLE QR FA VL+PTRELA QI EQF+ALGS I ++ V+VGGVD
Sbjct: 74 FCIPVLQALLE--NPQR----LFALVLTPTRELAFQIEEQFKALGSAIGIKTCVVVGGVD 127
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
MM Q + L K+PH+VVATPGRL+DHL TKGF+L ++K+LVLDEADR+LN DFE LD I
Sbjct: 128 MMGQQIILAKKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDFESELDTI 187
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMT KVKKLQRA L PVK +KY TVD L Q Y F+P+K KD
Sbjct: 188 LKVIPRERRTFLFSATMTGKVKKLQRAALTKPVKCAVNNKYHTVDKLFQYYLFLPSKDKD 247
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CYL ++ E++ ++ ++F TC T+ AL+LRNLG A+P+ G MSQ+KRLGALNKFK+
Sbjct: 248 CYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLGISAVPLHGQMSQAKRLGALNKFKS 307
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+VIN D+P SKDYIHRVGRTARAGR G +++ V QY+
Sbjct: 308 ATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRTARAGRFGKSVTFVTQYD 367
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
+E Y +IE+LIGKKLPE+ E EV +L ERV EA+R++++ +K+ G+K+R + ++
Sbjct: 368 VELYQRIEELIGKKLPEYEMEHNEVKVLQERVAEAQRLARLEMKERGSKKRGAVASDSEE 427
Query: 422 IGRQFGINKKKL 433
+ Q I K K+
Sbjct: 428 LADQ-NIGKHKI 438
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/416 (59%), Positives = 329/416 (79%), Gaps = 7/416 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A+ K KTFK+LG+ D L +AC ++G+K P+ IQAE+IP AL+G+DL+GLA+TGSGKT A
Sbjct: 43 ADTKAPKTFKDLGIIDSLCDACTSLGYKNPTPIQAESIPLALQGRDLVGLAETGSGKTAA 102
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL+E + +F VL+PTRELA+QI+E FEALGS IS+RCAV+VGG+D
Sbjct: 103 FALPILQALMEKPQ------PYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMD 156
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 157 MISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYK
Sbjct: 217 LKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYK 276
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV+IL E +T++FTRT + T+ L+++LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 277 DIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPLHGQLSQSARLGALGKFR 336
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGRTARAG++G AIS+V QY
Sbjct: 337 SGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGRTARAGKSGRAISVVTQY 396
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
E+E + +IE +GK+LPE E+EEV++L +RV +A+R++ +KD KR KG
Sbjct: 397 EVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTEMKDLHEKRGTKGA 452
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/425 (58%), Positives = 332/425 (78%), Gaps = 15/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D+L EACE +G+K P+ IQAE+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E ++ FF +L+PTRELA QIS+ FE+LGS I++RCAV+VGG+DM+ Q++
Sbjct: 112 QALMEKPQS------FFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSI 165
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 166 ALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPR 225
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P K+KD YLVY
Sbjct: 226 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVY 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E ST++FTRT T+ ++ +LR+LG AIP+ G +SQS RLGAL KF++ +I
Sbjct: 286 LLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDI 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRTARAG++GVAIS V QY++E +L
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 405
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQF 426
+IE +GKKL E+ E++EV++L ERV EA+R + M +K+ KR K ++F
Sbjct: 406 RIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIMEMKNFDEKRGTK--------AKKF 457
Query: 427 GINKK 431
G K+
Sbjct: 458 GKGKR 462
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/425 (58%), Positives = 332/425 (78%), Gaps = 15/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D+L EACE +G+K P+ IQAE+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E + +FF +L+PTRELA QIS+ FE+LGS I++RCAV+VGG+DM+ Q++
Sbjct: 112 QALMENPQ------SFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSI 165
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 166 ALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPR 225
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P K+KD YLVY
Sbjct: 226 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVY 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E ST++FTRT T+ ++ +LR+LG AIP+ G +SQS RLGAL KF++ +I
Sbjct: 286 LLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDI 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRTARAG++GVAIS V QY++E +L
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 405
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQF 426
+IE +GKKL E+ E++EV++L ERV EA+R + M +K+ KR K ++F
Sbjct: 406 RIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIMEMKNFDEKRGTK--------AKKF 457
Query: 427 GINKK 431
G K+
Sbjct: 458 GKGKR 462
>gi|358060304|dbj|GAA94058.1| hypothetical protein E5Q_00705 [Mixia osmundae IAM 14324]
Length = 447
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/409 (61%), Positives = 317/409 (77%), Gaps = 8/409 (1%)
Query: 2 AEEKEVKT--FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
A+E +T F LGL + L + CE +G+K PS+IQA++IP AL+G+DL+ LAQTGSGKT
Sbjct: 4 ADEPPAQTADFSSLGLIEPLCKVCEQLGYKKPSEIQAQSIPFALQGRDLVALAQTGSGKT 63
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
AFALPILQAL N+ + FFACVL+PTRELA QISEQF+ALGS I +RCAV+VGG
Sbjct: 64 AAFALPILQALW----NEPS--PFFACVLAPTRELAYQISEQFQALGSTIGVRCAVIVGG 117
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
+DMM Q++AL KRPHI+VATPGRL DHL NTKGFSL +KYLV+DEADRLL+ DF +D
Sbjct: 118 MDMMTQSIALSKRPHIIVATPGRLQDHLENTKGFSLKAIKYLVMDEADRLLDMDFGPVID 177
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
IL +IPR R T+LFSATMT KV KLQRA L NPVK+E ++KYSTVDTL Q+Y F P K+
Sbjct: 178 TILKIIPRERNTFLFSATMTTKVAKLQRASLSNPVKVEVSTKYSTVDTLVQEYCFFPFKH 237
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
K+ YLVY+ E++ S +VF RT + L+L+LR LG A+P+ G ++QS RLGALNKF
Sbjct: 238 KETYLVYLCNELAGKSIIVFVRTVHDAQRLSLILRTLGFPAVPLHGQLTQSNRLGALNKF 297
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
K+G IL+ TDVASRGLDIP VD V+NYDIPT+SKDYIHRVGRTARAGR+G +I+LV Q
Sbjct: 298 KSGGRQILVATDVASRGLDIPMVDYVVNYDIPTHSKDYIHRVGRTARAGRSGKSITLVTQ 357
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
Y++E +IE ++GKK+ EF ++E VL+L ERVTEA R + I++ G
Sbjct: 358 YDVELLQRIEGVVGKKMSEFAHDKEAVLVLSERVTEAAREAAREIREKG 406
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/403 (62%), Positives = 315/403 (78%), Gaps = 6/403 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + TFK LGL D L+EA E VG+K+P++IQ+E++PHALEG+D+IG+A+TGSGKT AFA
Sbjct: 15 EAQKHTFKSLGLIDPLLEALEQVGYKSPTEIQSESLPHALEGRDIIGVAETGSGKTAAFA 74
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ L E + FACVL+PTRELA QIS+QFEALG+ + RCAV+VGG+D+
Sbjct: 75 LPILQKLWEEPKG------LFACVLAPTRELAYQISQQFEALGAAMGARCAVIVGGMDLP 128
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL KRPH+VVATPGRL+ HL TKGFSL TLK+LVLDEADRLL+ DF ++D+IL
Sbjct: 129 TQAIALAKRPHVVVATPGRLLQHLEETKGFSLRTLKFLVLDEADRLLDMDFGPAIDKILK 188
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+IP+ R TYLFSATMT KV KLQRA L NPV++E + KY TV TL Q Y VP K K
Sbjct: 189 LIPKERTTYLFSATMTSKVAKLQRASLVNPVRVEVSGKYQTVSTLLQHYLLVPLKDKVVM 248
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+Y+ ++ +S ++FTRT RLL+++LR LG A+P+ G +SQS+RLGAL KFK+G
Sbjct: 249 LIYLANSLAQNSIIIFTRTVRDARLLSIILRTLGFPAVPLHGQLSQSQRLGALGKFKSGG 308
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLDIPSVD+VINYDIPT+SKDYIHRVGRTARAGR G AI+LV QY++E
Sbjct: 309 RKILVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRAGKAITLVTQYDVE 368
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+IEK+IGKK+ +P ++EEVLLL ERV+EA+R++ IKD
Sbjct: 369 LLQRIEKVIGKKMDAWPTDDEEVLLLKERVSEAERLAVNEIKD 411
>gi|388578792|gb|EIM19128.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 438
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/415 (59%), Positives = 317/415 (76%), Gaps = 8/415 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK+L L D+LV+ CE +G+K P++IQ ++IP++L+ +D+IGLAQTGSGKT AFALP++Q
Sbjct: 5 SFKDLNLIDDLVKNCERLGYKQPTEIQQQSIPYSLQSRDIIGLAQTGSGKTAAFALPVIQ 64
Query: 69 ALLEIAENQRTVPA-FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L + PA +F CVL+PTRELA QISEQFEALGS I LR A +VGG+DMM Q++
Sbjct: 65 LLYD-------NPAPYFCCVLAPTRELAYQISEQFEALGSNIGLRTATIVGGMDMMTQSI 117
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHI+VATPGRL DHL NTKGFSL +K+LV+DEADRLL+ DF +D++L ++P+
Sbjct: 118 ALSKKPHIIVATPGRLHDHLENTKGFSLRNIKFLVMDEADRLLDMDFGPIIDKLLKILPK 177
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R T LFSATMT KV KLQRA L NPVK+E + KY TV TL Q Y F P K KD YLVY+
Sbjct: 178 ERTTMLFSATMTTKVAKLQRASLSNPVKVEVSDKYQTVSTLLQHYLFFPFKMKDSYLVYL 237
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
EV+ S ++FTRT + ++++LRNLG AIP+ G +SQS RLGALNKFKAG NIL
Sbjct: 238 ANEVAGHSMIIFTRTVVDAQRISIILRNLGFPAIPLHGQLSQSSRLGALNKFKAGGRNIL 297
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIPSVD V+NYD P+NSKDYIHRVGRTARAGR+G AI+LV QY++E +
Sbjct: 298 VATDVASRGLDIPSVDYVVNYDTPSNSKDYIHRVGRTARAGRSGKAITLVTQYDVELLQR 357
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDI 422
IEK I K+ EFP +++ V LL+ERV EA RI+ + +++S K+R+ DD+
Sbjct: 358 IEKAINVKMEEFPHDKQAVPLLVERVNEASRIAAVELRESQQKKRKGKHSSRDDM 412
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/415 (60%), Positives = 325/415 (78%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+FK+LG+ D L EACE +G+K+P+ IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 54 EEAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAF 113
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL+ + + F +L+PTRELA QISE FEALGS IS+RCAV+VGG+DM
Sbjct: 114 ALPILQALMNKPQ------SLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDM 167
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL
Sbjct: 168 VSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKIL 227
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYKD
Sbjct: 228 KVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKD 287
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+ G +SQS RLGAL+KF++
Sbjct: 288 VYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRTLGFGSIPLHGQLSQSSRLGALSKFRS 347
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGRTARAG++G A S+V QY+
Sbjct: 348 RSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYD 407
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E +L+IE +GKKL E+ E+EEV++L +RV EA+R + +KD KR +G
Sbjct: 408 IEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITEMKDLHEKRGSRGA 462
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/425 (58%), Positives = 331/425 (77%), Gaps = 15/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D+L EACE +G+K P+ IQAE+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E ++ FF +L+PTRELA QIS+ FE+LGS I++RCAV+VGG+DM+ Q++
Sbjct: 112 QALMEKPQS------FFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSI 165
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 166 ALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPR 225
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P K+KD YLVY
Sbjct: 226 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVY 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E S ++FTRT T+ ++ +LR+LG AIP+ G +SQS RLGAL KF++ +I
Sbjct: 286 LLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDI 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRTARAG++GVAIS V QY++E +L
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 405
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQF 426
+IE +GKKL E+ E++EV++L ERV EA+R + + +K+ KR K ++F
Sbjct: 406 RIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIVEMKNFDEKRGTK--------AKKF 457
Query: 427 GINKK 431
G K+
Sbjct: 458 GKGKR 462
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/415 (60%), Positives = 326/415 (78%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+FK+LG+ D L EACE +G+K+P+ IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 54 EEAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAF 113
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL+ ++ F +L+PTRELA QISE FEALGS IS+RCAV+VGG+DM
Sbjct: 114 ALPILQALMNKPQS------LFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDM 167
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL
Sbjct: 168 VSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKIL 227
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYKD
Sbjct: 228 KVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKD 287
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+ G +SQS RLGAL+KF++
Sbjct: 288 IYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPLHGQLSQSSRLGALSKFRS 347
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGRTARAG++G A S+V QY+
Sbjct: 348 RSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYD 407
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E +L+IE +GKKL E+ E+EEV++L +RV EA+R + +KD KR +G
Sbjct: 408 IEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITEMKDLHEKRGSRGA 462
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/415 (60%), Positives = 325/415 (78%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+FK+LG+ D L EACE +G+K+P+ IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 54 EEAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAF 113
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL+ + + F +L+PTRELA QISE FEALGS IS+RCAV+VGG+DM
Sbjct: 114 ALPILQALMNKPQ------SLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDM 167
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL
Sbjct: 168 VSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKIL 227
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYKD
Sbjct: 228 KVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKD 287
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+ G +SQS RLGAL+KF++
Sbjct: 288 VYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPLHGQLSQSSRLGALSKFRS 347
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGRTARAG++G A S+V QY+
Sbjct: 348 RSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYD 407
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E +L+IE +GKKL E+ E+EEV++L +RV EA+R + +KD KR +G
Sbjct: 408 IEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITEMKDLHEKRGSRGA 462
>gi|302690998|ref|XP_003035178.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
gi|300108874|gb|EFJ00276.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
Length = 449
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/415 (60%), Positives = 319/415 (76%), Gaps = 11/415 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL D L+EA + + +K P++IQA+A+PHALEG+D+IG+A TGSGKT AFALPILQ
Sbjct: 15 TFKSLGLIDPLLEALDKMSFKAPTEIQAQALPHALEGRDIIGVASTGSGKTAAFALPILQ 74
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + FACVL+PTRELA QIS+QFEALGS + +RCAV+VGG D+M Q +A
Sbjct: 75 KLWDDPKG------LFACVLAPTRELAYQISQQFEALGSAMGVRCAVIVGGTDIMAQKVA 128
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVVATPGRL DHL TKGF+L +K+LVLDEADRLL+ DF +D+IL VIP+
Sbjct: 129 LAKRPHIVVATPGRLDDHLEKTKGFNLRGIKFLVLDEADRLLDMDFGPVIDKILKVIPKE 188
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NPV++E +KY TVD+L Q Y +P K KD LVY+
Sbjct: 189 RTTYLFSATMTTKVAKLQRASLSNPVRVEVNTKYQTVDSLLQYYLLMPLKEKDTLLVYLA 248
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ +S ++FTRT + L+++LR LG A+P+ G +SQS+RLGAL+KFK+G +L+
Sbjct: 249 NTLAQNSIIIFTRTVNDAARLSIILRTLGFPAVPLHGQLSQSQRLGALSKFKSGGRKVLV 308
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRTARAGR G +I+ V QY++E+ ++I
Sbjct: 309 ATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRAGKSITFVTQYDVEFIMRI 368
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS-----GNKRRRKGGDE 418
EK+IGKK+ +P +EEEV LL ERV EA R++ ++D G K+RR+GGDE
Sbjct: 369 EKVIGKKMELWPTDEEEVSLLRERVGEAARVAAAEMRDQAKAGHGGKKRRRGGDE 423
>gi|67527984|ref|XP_661837.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|74681080|sp|Q5B5E7.1|RRP3_EMENI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|40740142|gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|259481158|tpe|CBF74430.1| TPA: ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B5E7] [Aspergillus
nidulans FGSC A4]
Length = 465
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/429 (56%), Positives = 323/429 (75%), Gaps = 14/429 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K+FKELG+ D+L EACEN+G+K P+ IQ++AIP ALEG+D+IGLA+TGSGKT AF
Sbjct: 41 EPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAF 100
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP+LQAL+E + F VL+PTRELA QIS+ FE LGS I +RCAV+VGG+DM
Sbjct: 101 ALPMLQALMEAPQT------LFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDM 154
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYL +DEADRLL+ DF +SLD+I+
Sbjct: 155 VAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKII 214
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
++PR R TYLFSATM+ KV+ LQRA L NPV++ +SKY TV TL+ Y +P K+K+
Sbjct: 215 RILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKNL 274
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVY+L E + S ++FT T T+ +A MLR LG AIP+ G +SQS RLGAL KF++
Sbjct: 275 YLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSR 334
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVA+RGLDIPSVD+V N+D+P +SK YIHRVGRTARAG++GVAIS V QY++
Sbjct: 335 SRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYDV 394
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDI 422
E +L+IE + KKLPE+ E++EV+++ ERV EA R + + +K K+ +
Sbjct: 395 EVWLRIEHALSKKLPEYQVEKDEVMVMSERVAEASRQATIEMKSFDEKKGAR-------- 446
Query: 423 GRQFGINKK 431
G++FG K+
Sbjct: 447 GKKFGKGKR 455
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/412 (59%), Positives = 321/412 (77%), Gaps = 7/412 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE +VKTFKELG+ D L E+CE+VG+ TP+ IQA++IP AL+G+D+IGLA+TGSGKT AF
Sbjct: 45 EEVQVKTFKELGIVDALCESCESVGYTTPTSIQAKSIPVALQGRDVIGLAETGSGKTAAF 104
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP+LQALLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM
Sbjct: 105 ALPMLQALLEKPQ------PLFGLVLAPTRELAAQIGQTFEALGALISLRCAVIVGGLDM 158
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PH++VATPGRL+DHL TKGFSL TLKYLV+DEADRLL+ DF S+D++L
Sbjct: 159 VPQAIALGKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPSIDKLL 218
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
+PR R+TYLFSATM+ +V+ LQRA L++PV++ ++SKY TV TL Q Y F+P KD
Sbjct: 219 KFVPRERRTYLFSATMSSRVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYVFIPHIRKD 278
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL++I+ E + S +VFTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF+
Sbjct: 279 TYLIHIINEFAGKSCIVFTRTVYETQRVAILLRTLGFGAIPLHGQLSQSARLGALNKFRG 338
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G IL+ TDVA+RGLDIP VD+V+NYDIP++SK YIHRVGRTARAG++GVAISLV QY+
Sbjct: 339 GTREILVATDVAARGLDIPKVDIVLNYDIPSDSKTYIHRVGRTARAGKSGVAISLVTQYD 398
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
LE + +IE +GKKL EFP E+EEV+ RV EA+R ++ +K+ R +
Sbjct: 399 LELFTRIEAALGKKLDEFPTEKEEVMTFQARVEEAQRHARNEMKNVMESRNK 450
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/402 (61%), Positives = 313/402 (77%), Gaps = 6/402 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL D L+EA E VG+KTP+ IQ E++PHALEG+D+IG+A TGSGKT AFALPILQ
Sbjct: 18 TFKSLGLIDPLLEALEQVGYKTPTDIQVESLPHALEGRDIIGVASTGSGKTAAFALPILQ 77
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + FACVL+PTRELA QIS+QFE+LGS + RCAV+VGG+DM Q +A
Sbjct: 78 KLWEDPKG------LFACVLAPTRELAYQISQQFESLGSAMGARCAVIVGGMDMPAQAIA 131
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVVATPGRLM HL TKGFSL ++K+LVLDEADRLL+ DF S+D+IL VIP+
Sbjct: 132 LAKRPHIVVATPGRLMQHLEETKGFSLRSIKFLVLDEADRLLDLDFGASIDKILKVIPKE 191
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NPV+IE +SKY TV TL Q Y +P K KD YL+Y++
Sbjct: 192 RTTYLFSATMTTKVAKLQRASLSNPVRIEVSSKYQTVSTLLQYYLLMPLKDKDAYLIYLI 251
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ +S ++FTRT + L+++LR LG A+P+ G +SQS+RLGAL KFK+G +L+
Sbjct: 252 NSLAQNSIIMFTRTVHDAQRLSIILRTLGFPAVPLHGQLSQSQRLGALGKFKSGGRRVLV 311
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRTARAGR G +I+LV QY++E +I
Sbjct: 312 ATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRAGKSITLVTQYDVELVQRI 371
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
E+++GKK+ +P + EE+ LL ERV+EA R++ +++ G+K
Sbjct: 372 EQVVGKKMELWPTDPEEIALLKERVSEAARLAATELREQGSK 413
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 327/415 (78%), Gaps = 7/415 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A ++ K+FKELGL ++L EAC+++G+K P+ IQAEAIP AL+G+DLIGLA+TGSGKT A
Sbjct: 46 APKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAA 105
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL++ + FF VL+PTRELA QIS+ FE LGS IS+R VLVGG+D
Sbjct: 106 FALPILQALMDKPSS------FFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMD 159
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 160 MVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKI 219
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSATM+ KV+ LQRA L+NP+++ ++SK+ TV TL+Q Y F+P K+K
Sbjct: 220 LKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYIFIPHKHK 279
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVY+L E S ++F RT T+ L+ LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 280 DLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALGKFR 339
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK +IHR+GRTARAG++GVAIS QY
Sbjct: 340 SRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAISFATQY 399
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++E +L+IE +GKKLPE+PAE++EV++L ERV+EA+R + + +K+ K+ +G
Sbjct: 400 DVEAWLRIEGALGKKLPEYPAEKDEVMVLAERVSEAQRSAILEMKNYDEKKGSRG 454
>gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
gi|91207782|sp|Q4IFI0.1|RRP3_GIBZE RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 486
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/419 (59%), Positives = 325/419 (77%), Gaps = 11/419 (2%)
Query: 2 AEEKEV----KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSG 57
AEE V KTFK+LG+ D L EACE + +K P+ IQ ++IP AL+G+D+IGLA+TGSG
Sbjct: 50 AEETAVDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSG 109
Query: 58 KTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLV 117
KT AFALP+LQALL+ + F VL+PTRELA QI + FEALGS ISLRCAV+V
Sbjct: 110 KTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIV 163
Query: 118 GGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKS 177
GG+DM+ Q +ALGK+PHIVVATPGRL+DHL TKGFSL TLKYL++DEADRLL+ DF S
Sbjct: 164 GGLDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPS 223
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVP 236
+D+IL +PR R+TYLFSAT++ K++ LQRA L++PVK+ +S KY TV TL Q Y F+P
Sbjct: 224 IDKILKFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQNYLFIP 283
Query: 237 AKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
KD +L+Y++ E + ST+VFTRT T+ ++++LR LG AIP+ G +SQS RLGAL
Sbjct: 284 HPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGAL 343
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
NKF++G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++GVAISL
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISL 403
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
V QY+LE YL+IE +GKKL E+P E+EEV+ RV EA+RI+++ +K +R +KG
Sbjct: 404 VTQYDLEIYLRIEAALGKKLAEYPTEKEEVMAFQSRVEEAQRIARIEMKSFTEERGKKG 462
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 327/415 (78%), Gaps = 7/415 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A ++ K+FKELGL ++L EAC+++G+K P+ IQAEAIP AL+G+DLIGLA+TGSGKT A
Sbjct: 46 APKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAA 105
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL++ + FF VL+PTRELA QIS+ FE LGS IS+R VLVGG+D
Sbjct: 106 FALPILQALMDKPSS------FFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMD 159
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 160 MVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKI 219
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSATM+ KV+ LQRA L+NP+++ ++SK+ TV TL+Q Y F+P K+K
Sbjct: 220 LKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYIFIPHKHK 279
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVY+L E S ++F RT T+ L+ LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 280 DLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALGKFR 339
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK +IHR+GRTARAG++GVAIS QY
Sbjct: 340 SRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAISFATQY 399
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++E +L+IE +GKKLPE+PAE++EV++L ERV+EA+R + + +K+ K+ +G
Sbjct: 400 DVEAWLRIEGALGKKLPEYPAEKDEVMVLAERVSEAQRSAILEMKNYDEKKGSRG 454
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/419 (58%), Positives = 326/419 (77%), Gaps = 11/419 (2%)
Query: 2 AEEKEV----KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSG 57
AEE V KTFK+LG+ D L EACE + +K P+ IQ ++IP AL+G+D+IGLA+TGSG
Sbjct: 50 AEETAVDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQEQSIPVALQGRDIIGLAETGSG 109
Query: 58 KTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLV 117
KT AFALP+LQALL+ + F VL+PTRELA QI + FEALGS ISLRCAV+V
Sbjct: 110 KTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIV 163
Query: 118 GGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKS 177
GG+DM+ Q++ALGK+PHI+VATPGRL+DHL TKGFSL TLKYL++DEADRLL+ DF S
Sbjct: 164 GGLDMVPQSIALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPS 223
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVP 236
+D+IL +PR R+TYLFSAT++ K++ LQRA L++PVK+ +S KY TV TL Q Y F+P
Sbjct: 224 IDKILKFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQHYLFIP 283
Query: 237 AKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
KD +L+Y++ E + ST+VFTRT T+ ++++LR LG AIP+ G +SQS RLGAL
Sbjct: 284 HPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGAL 343
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
NKF++G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK Y+HRVGRTARAG++GVAISL
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYVHRVGRTARAGKSGVAISL 403
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
V QY+LE YL+IE +GKKL E+P E+EEV+ RV EA+R++++ +K +R +KG
Sbjct: 404 VTQYDLEIYLRIEAALGKKLGEYPTEKEEVMAFQSRVEEAQRVARIEMKSFTEERGKKG 462
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/413 (59%), Positives = 322/413 (77%), Gaps = 7/413 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K KTF ELG+R+EL +AC ++G+KTP+ IQ E+IP AL+GKD+IGLA+TGSGKT AFAL
Sbjct: 85 KRPKTFAELGVREELCDACISLGYKTPTAIQRESIPIALQGKDVIGLAETGSGKTAAFAL 144
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQALLE ++ +F VL+PTRELA QIS+QFEALGS I+++CAV+VGG+DM
Sbjct: 145 PILQALLEKQDH------YFGLVLAPTRELAYQISQQFEALGSLINVKCAVIVGGMDMTP 198
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q +AL K+PHI+VATPGRLMDHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL V
Sbjct: 199 QQIALAKKPHIIVATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDLDFGPILDKILQV 258
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCY 243
+PR R+T LFSATM+ K+ L RA L++PV++ ++S Y TV LKQ Y F+P K+KD Y
Sbjct: 259 LPRERRTMLFSATMSTKLDNLTRAALQSPVRVSISSSSYQTVKNLKQSYIFIPHKFKDIY 318
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVY++ E + + ++FTRT + T +A +LR LG+ AIP+ G ++QS RLGALNKF+ G
Sbjct: 319 LVYLVNEFAGQTCIIFTRTINETARIAFLLRALGRSAIPLHGQLNQSARLGALNKFRGGS 378
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL+ TDVA+RGLDIPSVD+V+NYD+P +SK Y+HRVGRTARAG+ GVAIS+V QY++E
Sbjct: 379 RDILVATDVAARGLDIPSVDLVLNYDLPPDSKTYVHRVGRTARAGKAGVAISIVTQYDVE 438
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
Y +IEK +GKKL EF E++EV++ +RV EA+R++ +K+ KR K G
Sbjct: 439 VYQRIEKALGKKLAEFGTEKDEVMVFAQRVQEAQRVAVQEMKNEHEKRGNKKG 491
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/405 (60%), Positives = 322/405 (79%), Gaps = 7/405 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D+L EAC +G+K P+ IQAE+IP AL+ +DLIGLA+TGSGKT AFALPIL
Sbjct: 53 KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPIL 112
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL++ + +FF VL+PTRELA QIS+ FEALGS I++RCAV+VGG+DM+ Q++
Sbjct: 113 QALMDKPQ------SFFGLVLAPTRELAFQISQSFEALGSTINVRCAVIVGGMDMVSQSI 166
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DEADRLL+ DF LD+IL ++PR
Sbjct: 167 ALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKILPR 226
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q YRF+P K+KD YLVY
Sbjct: 227 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYRFIPHKHKDIYLVY 286
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E S ++FTRT T+ ++ +LR LG AIP+ G +SQS RLGAL KF++ +I
Sbjct: 287 LLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIPLHGQLSQSSRLGALGKFRSRSRDI 346
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRTARAG++GVAIS V QY++E +L
Sbjct: 347 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 406
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+IE +GKKL E+ E++EV++L ERV EA+R + M +K+ K+
Sbjct: 407 RIEGALGKKLDEYDLEKDEVMVLAERVGEAQRQAIMEMKNFDEKK 451
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/427 (58%), Positives = 324/427 (75%), Gaps = 11/427 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E++ KTFK+LG+ D + E CE + + P+ IQA++IP+ALEG+D+IGLAQTGSGKT AFA
Sbjct: 60 EEQTKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFA 119
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+P+LQ+L E + + VL+PTRELA QISE FEALGS + LR AV+VGG++MM
Sbjct: 120 IPVLQSLYENPQ------PLYCVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNMM 173
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K+PH++VATPGRL+DHL NTKGFSL TLK+LV+DEADRLL+ +F SLD+IL
Sbjct: 174 TQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMDEADRLLDMEFGPSLDKILK 233
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R TYLFSATMT KV+KLQRA L +PV++ ++KY T D L Q F P K+KD +
Sbjct: 234 VIPRQRNTYLFSATMTSKVEKLQRASLVDPVRVAVSTKYQTADNLLQYMVFCPFKHKDTH 293
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVY+++E + +S ++F RT T+ ++L+LRNLG AIP+ G +SQ+ RLGALNKFK+G
Sbjct: 294 LVYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAIPLHGDLSQTARLGALNKFKSGS 353
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVASRGLDIP+VD+VINYDIP++SK YIHRVGRTARAGR G +++LV+QY+LE
Sbjct: 354 RNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRTARAGRAGKSVALVSQYDLE 413
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR--ISQMTIKDSGNKRR---RKGGDE 418
YL+IE +GKKL +P E E V+L ERV EA R I +M +D KR +K +
Sbjct: 414 LYLRIEGALGKKLDSYPLESEAVMLFSERVAEASRAAIQEMKGEDGTKKRSKFDKKRRRD 473
Query: 419 DDDIGRQ 425
+ DIG Q
Sbjct: 474 EMDIGEQ 480
>gi|66814184|ref|XP_641271.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
gi|74897202|sp|Q54VT4.1|DDX47_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx47; AltName:
Full=DEAD box protein 47
gi|60469306|gb|EAL67300.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
Length = 546
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/416 (57%), Positives = 313/416 (75%), Gaps = 8/416 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LG+ ++++AC +G+ P +IQ E+IP AL+G+D+IGLAQTGSGKT AF +P+LQ
Sbjct: 120 TFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQ 179
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LLE + F L+PTRELA QI++QF A+GS I ++ VLVGG+D M Q+LA
Sbjct: 180 KLLEAPQ------GLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLA 233
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH+VV +PGR++ HL +TKGF+L ++KY ++DEADRL + DFE+ ++ IL VIP+
Sbjct: 234 LAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVNNILKVIPKE 293
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NPVK++ ASKY TVDTL QQY FVP KYKDCYL YIL
Sbjct: 294 RNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQTVDTLLQQYLFVPFKYKDCYLAYIL 353
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ + T++FT TC ++ +A+MLRNLG AIPI+G M Q KRL +LNKFK G +IL+
Sbjct: 354 NELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILV 413
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDIPSVD+VINYD+PTNSK+Y+HRVGRTARAG +G AI++V QY++E Y +I
Sbjct: 414 ATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVTQYDVEMYQRI 473
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG--NKRRRKGGDEDDDI 422
E ++ KKL FP +EE VL+ LERV EA RI+ +KD + R GD + I
Sbjct: 474 EFVLKKKLDSFPCQEETVLIFLERVQEAHRIATNELKDKNYSSSSDRHSGDSEGSI 529
>gi|403164869|ref|XP_003324940.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165434|gb|EFP80521.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 518
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/414 (60%), Positives = 318/414 (76%), Gaps = 8/414 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+ KTF+ELGL EL EAC + +K P+ IQAE+IP+ALE +D+IGLAQTGSGKT AFA
Sbjct: 68 EEVSKTFEELGLIPELCEACRTLNYKRPTPIQAESIPYALEDRDIIGLAQTGSGKTAAFA 127
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LP+LQ+L + FF CVL+PTRELA QIS+QF+ALGS I ++ AV+VGG+DMM
Sbjct: 128 LPVLQSLWNDPK------PFFCCVLAPTRELAYQISQQFDALGSTIGVKTAVIVGGIDMM 181
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL KRPHI+VATPGRL DHL NTKGFSL LKYL++DEADRLL+ DF +D+IL
Sbjct: 182 SQAIALSKRPHIIVATPGRLHDHLENTKGFSLRNLKYLIMDEADRLLDMDFGPVIDKILK 241
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+TYLFSATMT KV KLQRA L +PVK++ ++KY TVD L Q Y F P K KD Y
Sbjct: 242 VIPRERRTYLFSATMTTKVAKLQRASLVSPVKVQMSTKYDTVDGLVQLYMFFPFKNKDAY 301
Query: 244 LVYILTEVSASSTMVFTRTC-DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
LVY++ E+S S ++FTRT DA RL +++LR LG +IP+ G +SQS RL +LN+FK+G
Sbjct: 302 LVYLVNELSGKSMIIFTRTVYDANRL-SIILRLLGFPSIPLHGQLSQSTRLSSLNQFKSG 360
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP+VD VIN+D+PTNSKDYIHRVGRTARAGR+G A++LV QY++
Sbjct: 361 NRSILVATDVASRGLDIPTVDCVINFDLPTNSKDYIHRVGRTARAGRSGKAVTLVTQYDV 420
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
E +IE +IGKK+ EFP ++E+V LL ERV EA R + I+D+ +K G
Sbjct: 421 ELLQRIEGVIGKKMEEFPHDKEQVFLLSERVGEASREATREIRDNERNGGKKSG 474
>gi|225718584|gb|ACO15138.1| Probable ATP-dependent RNA helicase DDX47 [Caligus clemensi]
Length = 470
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/405 (63%), Positives = 321/405 (79%), Gaps = 9/405 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE++ +F +LGL + L EACE+ GWKTPSKIQ EAIP AL G+D+IGLA+TGSGKTGAF
Sbjct: 25 EEEDPCSFSDLGLTEVLCEACESQGWKTPSKIQKEAIPVALTGRDVIGLAETGSGKTGAF 84
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP+LQALLE + QR FA +L+PTRELA QISE FE LG I ++C VLVGG+DM
Sbjct: 85 ALPVLQALLE--KPQR----LFALILTPTRELAYQISETFEKLGKSIGIKCGVLVGGMDM 138
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L LGK+PHI+VATPGRL+DH+ NTKGF L +LKYL++DEADR+LN DFE +D+IL
Sbjct: 139 MSQALVLGKKPHIIVATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKIL 198
Query: 183 NVIPRM--RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
+ +PR R+ LFSATMTKKV KLQRA L+NPV++E +SKY TVD L Q Y F+P KYK
Sbjct: 199 SSLPRGEGRKNMLFSATMTKKVAKLQRASLQNPVRVEVSSKYQTVDKLLQYYLFIPLKYK 258
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+ YLV+I+ E++ +S ++F+ TC T LAL+LRNLG AIP++G MSQ+KRL +LNKFK
Sbjct: 259 EMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFK 318
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ILI TDVASRGLDIP VD+VINYDIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 319 TKSRSILIATDVASRGLDIPHVDIVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQY 378
Query: 361 ELEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQMTI 404
++E Y +IE LIGKKLP + A EEEV++L +RV EA R ++M I
Sbjct: 379 DVELYQRIETLIGKKLPLYSSATEEEVMVLADRVNEAVRFAKMEI 423
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/415 (60%), Positives = 326/415 (78%), Gaps = 13/415 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL + L +ACE++ +KTP+ IQ E+IP+AL+ KD+IGLAQTGSGKT AFALP+LQ
Sbjct: 60 TFASLGLIEPLCKACESLNFKTPTPIQTESIPYALQNKDIIGLAQTGSGKTAAFALPVLQ 119
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+L + + AFFACVL+PTRELA QIS+QF+ALGS I ++ V+VGG+DMM Q +A
Sbjct: 120 SLWD------SPSAFFACVLAPTRELAYQISQQFDALGSTIGVKTVVIVGGMDMMSQAIA 173
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPH++VATPGRL DHL +TKGFSL L++L++DEADRLL+ DF +D+IL VIP+
Sbjct: 174 LSKRPHVIVATPGRLHDHLEHTKGFSLRNLQFLIMDEADRLLDMDFGPVIDKILKVIPKE 233
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+TYLFSATMT KV KLQRA L NPVK+E ++KY TV L Q Y F+P K+KD YLVY+
Sbjct: 234 RKTYLFSATMTTKVAKLQRASLNNPVKVEVSAKYDTVSALVQTYLFLPFKHKDTYLVYLA 293
Query: 249 TEVSASSTMVFTRTC-DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
E+S S +VFTRT DA+RL +L+LR LG A+P+ G +SQS RLGALNKFK+G+ ++L
Sbjct: 294 NELSGKSLIVFTRTVHDASRL-SLILRTLGFPAVPLHGQLSQSARLGALNKFKSGDQSLL 352
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP+VD VIN+D+PTNSKDYIHRVGRTARAGR+G +I+LV QY++E +
Sbjct: 353 VATDVASRGLDIPAVDCVINFDLPTNSKDYIHRVGRTARAGRSGKSITLVTQYDVELLQR 412
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKR--ISQM-TIKDSGNK--RRRKGGD 417
IE +IGKK+ EF ++E+V++L ERV EA R +M I+ +GNK R+RK G+
Sbjct: 413 IEGVIGKKMNEFEHQKEQVMVLGERVGEAAREVAREMREIERNGNKFNRKRKSGE 467
>gi|19114747|ref|NP_593835.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654514|sp|Q9P6N8.1|RRP3_SCHPO RecName: Full=ATP-dependent rRNA helicase rrp3
gi|7708606|emb|CAB90153.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe]
Length = 465
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/408 (60%), Positives = 314/408 (76%), Gaps = 6/408 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELG+ DEL EACE +G+KTP+ IQ EAIP L +D+IGLAQTGSGKT AFALP++
Sbjct: 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q L FFA VL+PTRELA QISEQFEA+G I +R V+VGG+DM+ Q +
Sbjct: 106 QELWN------NPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAV 159
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PH++V TPGRLMDHL NTKGFSL LKYL++DEADRLL+ DF +D+IL +IP
Sbjct: 160 ALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPH 219
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T LFSATMT KV+KLQRA L PV++ +SK+STVDTL Q+Y F P K+KD YLVY+
Sbjct: 220 ERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYL 279
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ E++ +S ++F RT + T+ LA++LR LG AIP+ G +SQS RLGALNKFK+G + L
Sbjct: 280 VNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTL 339
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDIP VD+VINYDIPT+SK YIHRVGRTARAGR G +I+LV QY+LE +L+
Sbjct: 340 VATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLR 399
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
IE IGKK+ E+ ++E V LL ERV EA+R + + +K+ ++R+ KG
Sbjct: 400 IEATIGKKMQEYEIDKEGVFLLSERVGEAQREAIIQMKEIHDRRKSKG 447
>gi|258563612|ref|XP_002582551.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
gi|237908058|gb|EEP82459.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
Length = 472
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/409 (59%), Positives = 320/409 (78%), Gaps = 7/409 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D L EACE++G+K P++IQAE+IP AL+G+D+IGLA+TGSGKT AFALPIL
Sbjct: 46 KSFKDLGVIDSLCEACESLGYKAPTQIQAESIPLALQGRDVIGLAETGSGKTAAFALPIL 105
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL++ + + F VL+PTRELA QISEQ EALGS IS+RCAV+VGG+DM+ Q +
Sbjct: 106 QALMDKPQ------SMFGLVLAPTRELAYQISEQVEALGSLISVRCAVIVGGMDMVSQAI 159
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL V+P+
Sbjct: 160 ALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKVLPK 219
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYKD Y VY
Sbjct: 220 ERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQNYLFIPHKYKDIYFVY 279
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E S +VFTRT + T+ LA++LR LG AIP+ G +SQS RLGAL KF++ NI
Sbjct: 280 LLNEFPGQSVIVFTRTVNETQRLAILLRALGFGAIPLHGQLSQSARLGALGKFRSRSRNI 339
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGRTARAG++G A SLV Q+++E +
Sbjct: 340 LVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGHAFSLVTQFDIEIWQ 399
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +GK E+ E+EEV++L +RV+EA+R + +K+ R +KG
Sbjct: 400 RIEGALGKTFDEYKTEKEEVMVLSDRVSEAQRHAITEMKELHENRGKKG 448
>gi|358399923|gb|EHK49260.1| hypothetical protein TRIATDRAFT_143973 [Trichoderma atroviride IMI
206040]
Length = 479
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/436 (57%), Positives = 322/436 (73%), Gaps = 23/436 (5%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AE +E KTFKELG+ D L EACE++ +KTP+ IQA +IP AL+G+D+IGLA+TGSGKT A
Sbjct: 49 AEAEEPKTFKELGIVDSLCEACESLNYKTPTSIQARSIPVALQGRDVIGLAETGSGKTAA 108
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALLE + FF VL+PTRELA QI + FEALG+ ISLRCAV+VGG+D
Sbjct: 109 FALPILQALLEKPQ------PFFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLD 162
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL +LKYLV+DEADRLL+ DF S+D+I
Sbjct: 163 MVPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKI 222
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L IPR R+TYLFSATM+ KV+ LQRA L++P ++ +S KY TV TL Q Y F+P K K
Sbjct: 223 LKFIPRERRTYLFSATMSSKVESLQRASLRDPARVSVSSNKYQTVSTLLQHYVFIPHKRK 282
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YL+Y++ E + S ++FTRT + +A++LR LG AIP+ G +SQS RLGALNKFK
Sbjct: 283 DTYLIYLVNEFAGKSIIIFTRTVFEAQRVAILLRTLGFGAIPLHGQLSQSARLGALNKFK 342
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G IL+ TDVA+RGLDIP+VD+V+N+D+P +SK YIHRVGRTARAG++G+AIS+ QY
Sbjct: 343 GGSREILVATDVAARGLDIPAVDVVLNHDLPQDSKTYIHRVGRTARAGKSGIAISIATQY 402
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK--------------- 405
+LE Y +IE +GK+L ++P E EEV+ RV EA R + +K
Sbjct: 403 DLEIYQRIEAALGKELDQYPTEREEVMAFQSRVDEALRTVRGEMKAFLENKGKGKGKDRG 462
Query: 406 -DSGNKRRRKGGDEDD 420
+G KRRR D+++
Sbjct: 463 KTAGPKRRRDNMDQEE 478
>gi|300175700|emb|CBK21243.2| unnamed protein product [Blastocystis hominis]
Length = 485
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/426 (58%), Positives = 320/426 (75%), Gaps = 13/426 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALE---GKDLIGLAQTGSGKTGAFAL 64
KTF + G+ D L +A +N+GWK PS IQ + + AL+ KD+I +A+TGSGKTGAFA+
Sbjct: 52 KTFSDYGVCDTLCQAIDNLGWKHPSSIQRDVLKIALQEDQNKDIIAIAETGSGKTGAFAI 111
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PI+Q L++ QR +A +++PTRELA QISEQFEALGS + L+ AV+VGG+DM+Q
Sbjct: 112 PIIQRLID--NPQR----MYALIVTPTRELAFQISEQFEALGSSVGLKTAVIVGGIDMVQ 165
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q LAL ++PH+VV TPGRL+DHL NTKGFSL T+KYLVLDEADR L+ DFE+++D+IL+
Sbjct: 166 QALALARKPHVVVGTPGRLVDHLENTKGFSLNTMKYLVLDEADRCLSMDFEEAIDKILSC 225
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
P+ R TYLFSATMT+KV KLQRA L++PVKI+ +SKY TV TL QQY F+PAKYK+CYL
Sbjct: 226 FPKERVTYLFSATMTQKVVKLQRASLQDPVKIQVSSKYQTVSTLIQQYLFIPAKYKECYL 285
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+I+ E ST++F TC +++LL L LRNLG +A+ I+G++SQ KRLGALNKFK G
Sbjct: 286 AFIMNEFRGKSTILFVSTCSSSQLLTLFLRNLGFKAVCINGNLSQVKRLGALNKFKEGAR 345
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NILI TDVASRGLDIP VD+V+NYDIP N KDY+HRVGRTARAG++G AI+ V QY++E
Sbjct: 346 NILIATDVASRGLDIPEVDLVVNYDIPGNGKDYVHRVGRTARAGKSGRAITFVTQYDVES 405
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI----KDSGNKRRRKGGDEDD 420
Y +IEKLI K+L +P E E L L+ TEA +I+Q + K + R GGD DD
Sbjct: 406 YQRIEKLIEKRLDAYPCSENEALTYLQTTTEALQIAQREMKEEEKKGKKGKNRDGGDADD 465
Query: 421 DIGRQF 426
+ F
Sbjct: 466 YVMDTF 471
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/409 (59%), Positives = 319/409 (77%), Gaps = 4/409 (0%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
++E K+F ELG+ D+L +AC N+G+ P+ IQ E+IP ALEGKD+IGLA+TGSGKT AFA
Sbjct: 79 KEEDKSFAELGVIDQLCDACANLGFTKPTAIQKESIPIALEGKDIIGLAETGSGKTAAFA 138
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQAL+ ++++ F VL+PTRELA QIS+QFEALGS I++RCAVLVGG+DM+
Sbjct: 139 LPILQALMAAPQHEQHK---FGLVLAPTRELAYQISQQFEALGSLINVRCAVLVGGMDMV 195
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K PHIVVATPGRL+DHL NTKGFS+ +LKYLV+DEADRLL+ DF LD+IL
Sbjct: 196 PQAIALNKNPHIVVATPGRLLDHLENTKGFSMRSLKYLVMDEADRLLDLDFGPILDKILQ 255
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDC 242
V+P R+T LFSATM+ K+ L RA L+NPV++ ++S Y TV L Q+Y F+P K+KD
Sbjct: 256 VLPSKRRTMLFSATMSTKLNNLTRAALQNPVRVSISSSSYQTVKNLMQRYIFIPHKFKDI 315
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVY+L E + + +VFTRT + T+ +A +LR LG+ AIP+ G M+QS RLGALNKF+ G
Sbjct: 316 YLVYLLNEFAGQTCIVFTRTINETQRIAFLLRALGRSAIPLHGQMNQSARLGALNKFRGG 375
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
IL+ TDVA+RGLDIPSVD+V+N+D+P +SK Y+HRVGRTARAG++GVAIS+V QY++
Sbjct: 376 SREILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKSGVAISVVTQYDI 435
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
E Y +IEK +GKKL E+ AE +EV++ RV EA+RI+ +K+ KR
Sbjct: 436 EIYQRIEKALGKKLDEYAAERDEVMVFAPRVAEAQRIAITEMKNEHEKR 484
>gi|302886563|ref|XP_003042171.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723080|gb|EEU36458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 490
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/409 (59%), Positives = 317/409 (77%), Gaps = 7/409 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LG+ D L EACE + +K P+ IQ ++IP AL+G+D+IGLA+TGSGKT AFALP+L
Sbjct: 65 KTFKDLGVNDALCEACEALNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAFALPVL 124
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + F VL+PTRELA QI + FEALGS ISLRCAV+VGG+DM+ Q +
Sbjct: 125 QALLDKPQ------PLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAI 178
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL TKGFSL TLKYL++DEADRLL+ DF S+D+IL IPR
Sbjct: 179 ALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILKFIPR 238
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSAT++ K++ LQRA L++PV++ +S KY TV TL Q Y F+P KD YLVY
Sbjct: 239 ERRTYLFSATLSSKIESLQRASLRDPVRVSISSNKYQTVSTLIQHYMFIPFPQKDTYLVY 298
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ E + ST+VFTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF+AG +I
Sbjct: 299 LVNEHTGKSTIVFTRTVWETQRVAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGTRDI 358
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIP VD+V+NYD+P +SK YIHRVGRTARAG++GVAI+LV QY+LE Y
Sbjct: 359 LVATDVAARGLDIPKVDVVLNYDMPQDSKTYIHRVGRTARAGKSGVAINLVTQYDLEIYA 418
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +GKKL E+P+E+EEV+ R+ EA+R +++ +K + KG
Sbjct: 419 RIEAALGKKLTEYPSEKEEVMTFQSRIQEAQRHARIEMKSMSEAKGSKG 467
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/398 (60%), Positives = 314/398 (78%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK +GL D L+EA E +G+KTP+ IQAEA+PHALEG+D+IG+A TGSGKT AFALPI+Q
Sbjct: 16 SFKSIGLIDPLLEAVEQLGYKTPTDIQAEALPHALEGRDIIGVASTGSGKTAAFALPIIQ 75
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
AL + FACV++PTRELA QIS+QFEALGSGI +RCAV++GG+D++ Q++A
Sbjct: 76 ALWNDPK------GLFACVIAPTRELAYQISQQFEALGSGIGVRCAVIIGGMDVVSQSIA 129
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VATPGRL HL NTKGFSL LK+ VLDEADRLL+ DF +D+IL VIP+
Sbjct: 130 LAKKPHIIVATPGRLNYHLENTKGFSLRGLKFFVLDEADRLLDMDFGPDIDKILKVIPKE 189
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L+NPV++E +SKYSTV TL Q Y F+P +K+ +LV +
Sbjct: 190 RTTYLFSATMTTKVAKLQRASLQNPVRVEVSSKYSTVSTLLQYYLFMPLSHKEVHLVNLA 249
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ +S M+FTRT + L+++LR LG A+P+ G +SQS+RLGAL+KFK+G +IL+
Sbjct: 250 NTLAQNSMMIFTRTVHDAQKLSIILRTLGFPAVPLHGQLSQSQRLGALSKFKSGGRSILV 309
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRTARAGR G +I+LV QY++E +I
Sbjct: 310 ATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGRTARAGRAGKSITLVTQYDIELIHRI 369
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
EK+ GKK+ +P +++E+ LL ERV EA R++ +KD
Sbjct: 370 EKVTGKKMDLWPTDKDEIALLRERVEEASRLAVNEMKD 407
>gi|330794252|ref|XP_003285194.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
gi|325084915|gb|EGC38333.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
Length = 434
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/426 (57%), Positives = 320/426 (75%), Gaps = 11/426 (2%)
Query: 3 EEKEVK----TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGK 58
EE+E K TF+ LG+ ++++AC G+K P +IQ E IP AL+G+D+IGLAQTGSGK
Sbjct: 1 EEEEKKYEHVTFESLGVHPQIIDACYRSGFKKPKEIQRETIPWALKGRDIIGLAQTGSGK 60
Query: 59 TGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
TGAF +P+LQ LLE + F ++PTRELA QI+EQF ALG+ I ++ VLVG
Sbjct: 61 TGAFVIPVLQKLLEQPQ------GIFCLCIAPTRELAFQIAEQFNALGATIGVKTCVLVG 114
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
G+D M Q+L L K+PHI++ +PGR++ HL NTKGF+L ++KY ++DEADRL DFE+ +
Sbjct: 115 GIDSMTQSLQLAKKPHIIIGSPGRIIFHLENTKGFNLRSIKYFIMDEADRLFGADFEEEV 174
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
+ IL VIP+ R T+LFSATMT KV KLQRA L NPVKI+ A+KY TVDTL QQY F+P K
Sbjct: 175 NNILKVIPKERNTFLFSATMTSKVAKLQRASLVNPVKIQVATKYQTVDTLIQQYLFIPFK 234
Query: 239 YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
YK+CYLVYIL E++ + T++FT TC ++ + LMLRNLG AIPI+G M Q+KRL +L+K
Sbjct: 235 YKECYLVYILNELAGNLTIIFTSTCASSNKVTLMLRNLGLAAIPINGDMDQAKRLASLSK 294
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK G +IL+ TDVA+RGLDIP VD+VINYD+PTNSK+YIHRVGRTARAG +G AI+LV
Sbjct: 295 FKQGTKSILVATDVAARGLDIPMVDLVINYDVPTNSKEYIHRVGRTARAGNSGRAITLVT 354
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-NKRRRKGGD 417
QY++E Y +IE ++ KKL EFP +E+ VL+ LERVT+A R + +KDSG + + GD
Sbjct: 355 QYDVEMYQRIEFVLKKKLDEFPCQEDTVLIFLERVTQAVREATNKLKDSGYSSGDKSSGD 414
Query: 418 EDDDIG 423
+ IG
Sbjct: 415 AEGSIG 420
>gi|119186961|ref|XP_001244087.1| hypothetical protein CIMG_03528 [Coccidioides immitis RS]
gi|118595828|sp|Q1E1N5.1|RRP3_COCIM RecName: Full=ATP-dependent rRNA helicase RRP3
gi|392870806|gb|EAS32639.2| ATP-dependent rRNA helicase RRP3 [Coccidioides immitis RS]
Length = 474
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/415 (58%), Positives = 323/415 (77%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K+FK+LG+ D L EAC+++G+K P++IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 43 EATTTKSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAF 102
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL++ + + F VL+PTRELA QIS+QFEALGS IS+RCAV+VGG+DM
Sbjct: 103 ALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDM 156
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL
Sbjct: 157 VSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKIL 216
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q +P K+KD
Sbjct: 217 KVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLIIPHKHKD 276
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E S ++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL KF++
Sbjct: 277 IYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSARLGALGKFRS 336
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGRTARAG++G A SLV QY+
Sbjct: 337 RSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLVTQYD 396
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E + +IE +GK+L E+ E+EEV++L +RV EA+R + +K+ R +KG
Sbjct: 397 VEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITEMKELHENRGKKGA 451
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/410 (59%), Positives = 321/410 (78%), Gaps = 7/410 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D L EAC+ +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 60 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 119
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + F VL+PTRELA QIS+QFEALGS I ++CAV+VGG+DM+ Q++
Sbjct: 120 QALLDKPQ------PLFGLVLAPTRELAYQISQQFEALGSVIRVKCAVIVGGMDMVPQSI 173
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 174 ALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLPR 233
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY TV TL Q Y F+P +KD YL+Y
Sbjct: 234 ERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLIHKDTYLIY 293
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + S ++FTRT + T+ +A++LR LG AIP+ G +SQS RLGALNKF+AG I
Sbjct: 294 LLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREI 353
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++G AIS+V QY+LE ++
Sbjct: 354 LVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHRVGRTARAGKSGHAISVVTQYDLEIFM 413
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+IE +GKK E+P ++EV++ RV EA+R ++ +K+ R +KG
Sbjct: 414 RIEAALGKKQVEYPTVKDEVMVFKPRVEEAQRHARNEMKNLHEDRGKKGA 463
>gi|303317380|ref|XP_003068692.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108373|gb|EER26547.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 474
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/415 (58%), Positives = 323/415 (77%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K+FK+LG+ D L EAC+++G+K P++IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 43 EATTTKSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAF 102
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL++ + + F VL+PTRELA QIS+QFEALGS IS+RCAV+VGG+DM
Sbjct: 103 ALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDM 156
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL
Sbjct: 157 VSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKIL 216
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q +P K+KD
Sbjct: 217 KVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLIIPHKHKD 276
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E S ++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL KF++
Sbjct: 277 IYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSARLGALGKFRS 336
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGRTARAG++G A SLV QY+
Sbjct: 337 RSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLVTQYD 396
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E + +IE +GK+L E+ E+EEV++L +RV EA+R + +K+ R +KG
Sbjct: 397 VEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITEMKELHENRGKKGA 451
>gi|403347814|gb|EJY73340.1| hypothetical protein OXYTRI_05530 [Oxytricha trifallax]
Length = 508
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/413 (58%), Positives = 316/413 (76%), Gaps = 10/413 (2%)
Query: 3 EEKEV---KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
EEK + TF++LG+ EL EA +N+G+K P+KIQAE++ + L+GKD+IGLA+TGSGKT
Sbjct: 51 EEKTIMSSTTFEKLGVCSELQEALKNMGYKCPTKIQAESLQYTLKGKDIIGLAETGSGKT 110
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
AFA+P++Q LL+ + FFACV+SPTREL +QI+EQFEA+G+GI LR AVLVGG
Sbjct: 111 AAFAIPVIQQLLDNPQ------PFFACVMSPTRELCVQIAEQFEAIGAGIGLRTAVLVGG 164
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
+DM+ Q +AL K PH+V+ TPGR+ DHL NTKGF L LK+L+ DEADRLL+ DFEK ++
Sbjct: 165 LDMVSQAIALSKNPHVVIGTPGRMADHLANTKGFHLKKLKFLIFDEADRLLSMDFEKQIN 224
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
IL IP+ R TYLFSATMT KV+KLQRA L +PVKIE +SKY TVDTL Q Y F+P K+
Sbjct: 225 LILTQIPKSRNTYLFSATMTSKVQKLQRASLNDPVKIEVSSKYKTVDTLVQNYIFIPEKH 284
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
K+ YLVY+LT+ + ++FT TC+ + LAL+LRNL +A+ I+G ++Q++RL ALNKF
Sbjct: 285 KETYLVYLLTQFAGQKMIIFTTTCNQSMKLALILRNLNFKAVNINGQLTQTQRLSALNKF 344
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
KA E NILI TDVASRGLDIP VD VIN+DIP +SKDY+HRVGRTARAG+TG AI+ V Q
Sbjct: 345 KANERNILIATDVASRGLDIPEVDFVINFDIPQHSKDYVHRVGRTARAGKTGKAITFVTQ 404
Query: 360 YELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
Y++E + +IE+LI KKL E+P + + L+L + V EA R++ +K+ K
Sbjct: 405 YDVETFQKIEQLIDKKLDEYPGLDSKAALILTDSVVEATRLAVFEMKNREGKH 457
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/423 (58%), Positives = 318/423 (75%), Gaps = 15/423 (3%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+A++ + F +LG+ ++VEAC N+G+K P+ IQ +AIP AL+ +D+IGLAQTGSGKT
Sbjct: 97 IADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTA 156
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AF +PILQAL + + FFACVL+PTRELA QIS+Q EALGS I +R A +VGG+
Sbjct: 157 AFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGM 210
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DEADRLL+ DF +D+
Sbjct: 211 DMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDK 270
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
+L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV TLKQ Y F+P +K
Sbjct: 271 LLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYMFMPFAHK 330
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G +SQ RLGALNKFK
Sbjct: 331 DTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFK 390
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTARAGR+G +++LV QY
Sbjct: 391 TGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQY 450
Query: 361 ELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMTIKDSG-------NKR 411
++E +IE +IG K+ EFP ++E V+LL ERV EA R + +KD G KR
Sbjct: 451 DVELLQRIEAVIGLKMTEFPGGNDKEAVMLLSERVAEAHRAAVRELKDKGVGSAGGSGKR 510
Query: 412 RRK 414
+RK
Sbjct: 511 KRK 513
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/423 (58%), Positives = 318/423 (75%), Gaps = 15/423 (3%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+AE+ + TF +LG+ +++EAC N+G++ P+ IQ +AIP AL+ +D+IGLAQTGSGKT
Sbjct: 108 LAEDGKKVTFADLGVIPQIIEACTNMGFQHPTPIQVKAIPEALQARDVIGLAQTGSGKTA 167
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AF +PILQAL + + FFACVL+PTRELA QIS+Q EALGS I +R A +VGG+
Sbjct: 168 AFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGM 221
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DEADRLL+ DF +D+
Sbjct: 222 DMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDK 281
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
+L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV TLKQ Y F+P +K
Sbjct: 282 LLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYLFMPFAHK 341
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G +SQ RLGALNKFK
Sbjct: 342 DTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFK 401
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTARAGR+G +++LV QY
Sbjct: 402 TGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQY 461
Query: 361 ELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMTIKDSG-------NKR 411
++E +IE +I K+ EFP ++E V+LL ERV EA R + +KD G KR
Sbjct: 462 DVELLQRIEAVIALKMTEFPGGNDKEAVMLLSERVAEAHRAAVRELKDKGVGSAGGSGKR 521
Query: 412 RRK 414
+RK
Sbjct: 522 KRK 524
>gi|298711460|emb|CBJ32599.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 848
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/399 (59%), Positives = 311/399 (77%), Gaps = 6/399 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ LG+ L EA +GW ++IQ +A+P A EGKD+IGLA+TGSGKTGAFALPILQ
Sbjct: 407 SFESLGVTGPLCEAAAQLGWTHATEIQRQALPLAFEGKDVIGLAETGSGKTGAFALPILQ 466
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR FA +++PTRELA QI+E EALG GI L+ +VGG+DM QQ++A
Sbjct: 467 ALLE--NPQR----LFAVIMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVA 520
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L +PH+V+ATPGRL+DHL NTKGFSL T KYLVLDEADR+L DFE+ ++++L+V+PR
Sbjct: 521 LALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLPRE 580
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMT KV KLQRA LKNP ++E A+K+ST TL QQY F+PAK+KDCYL Y+L
Sbjct: 581 RRTFLFSATMTSKVAKLQRASLKNPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVL 640
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E + ST+VF TC+ + +AL+LRNLG +A+ + G M Q KRLGAL KFK+G+ N+LI
Sbjct: 641 NEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLI 700
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIPSVD+V+N +IP++ KDYIHRVGRTARAGR G +I+ V QY++E Y ++
Sbjct: 701 ATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRM 760
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
E LIG+KLP + +EE VL+L ERV EA+R++ ++++
Sbjct: 761 EALIGQKLPPYVCDEETVLVLQERVGEAQRMAAREMREA 799
>gi|313228985|emb|CBY18137.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/430 (56%), Positives = 317/430 (73%), Gaps = 9/430 (2%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
++ ++ LG+ DE+ + C ++ W P+ IQ ++IP A+EGKD+IGLA+TGSGKT AFA+P+
Sbjct: 23 LEAWQSLGVCDEVAQTCVDLKWSKPTPIQQKSIPIAIEGKDVIGLAETGSGKTAAFAIPV 82
Query: 67 LQALLEIAENQRTVPAFFAC-VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LQ LL+ R +C V++PTRELA QI EQF+ALGS I L CA +VGG++MM Q
Sbjct: 83 LQTLLKTPGGGR-----LSCLVMTPTRELAFQIREQFQALGSSIGLSCACIVGGIEMMSQ 137
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
LAL K+PH++VATPGRL+DHL T+GF+L LK+L++DEADR+LN DFE +D+IL I
Sbjct: 138 QLALAKKPHVIVATPGRLVDHLEKTRGFNLKALKFLIMDEADRILNLDFEAEVDKILRAI 197
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
PR RQT LFSATMT KVKKLQRA LKNPVKI SKY TVD Q+Y F+P +K+CYLV
Sbjct: 198 PRERQTMLFSATMTAKVKKLQRAALKNPVKISINSKYKTVDKNIQKYMFIPEAHKECYLV 257
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L E+ SS M+FT TC T L+A +++ LG ++P+ G MSQ KRLGAL +FK +
Sbjct: 258 SLLNELQGSSFMIFTSTCAKTSLIARLVKRLGYDSVPLHGQMSQQKRLGALARFKGKSRS 317
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+CTDVASRGLD+P VD VINYD+PTN+KDYIHRVGRTARAGR G +++ V+QY++E Y
Sbjct: 318 ILVCTDVASRGLDVPHVDCVINYDVPTNTKDYIHRVGRTARAGRAGKSVTFVSQYDVELY 377
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG---DEDDDI 422
+IE IGKKL ++P E++EV+ L ERV EAKRI+ IK+ KR+ K DE+ I
Sbjct: 378 QKIEAHIGKKLDQWPCEKDEVMALKERVDEAKRIAVQEIKEEEGKRKSKKKRQFDEEQSI 437
Query: 423 GRQFGINKKK 432
+ G K K
Sbjct: 438 KDRIGKVKHK 447
>gi|260808869|ref|XP_002599229.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
gi|229284506|gb|EEN55241.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
Length = 436
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/398 (64%), Positives = 309/398 (77%), Gaps = 22/398 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LG+ D L EACE++ W TP+KIQ EAIP ALEGKD+IGLA+TGSGKTG FALPILQ
Sbjct: 22 TFKDLGVVDVLCEACEHLKWTTPTKIQTEAIPLALEGKDVIGLAETGSGKTGTFALPILQ 81
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+LLE + QR FA VL+PTRELA QISEQFEALGS I ++C V+VGG+DM+ Q L
Sbjct: 82 SLLE--KPQR----LFALVLTPTRELAFQISEQFEALGSSIGIKCVVVVGGIDMVTQALQ 135
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH+++ATPGRL+DHL NTKGF+L LKYLV D+IL VIPR
Sbjct: 136 LAKKPHVIIATPGRLVDHLENTKGFNLRALKYLV----------------DKILKVIPRE 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMTKKV KLQRA L NPVK+E SKY TVDTL+Q Y F+P+KYKD YLV IL
Sbjct: 180 RHTYLFSATMTKKVAKLQRASLSNPVKVEVNSKYKTVDTLQQSYLFIPSKYKDVYLVSIL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ +S MVF TC+ T+ A +LRNLG AIP+ G +SQ+ RLGAL+KFKA +ILI
Sbjct: 240 NELAGNSFMVFCSTCNNTQRTAFLLRNLGFNAIPLHGQLSQNSRLGALHKFKAKSRSILI 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E Y +I
Sbjct: 300 ATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELYQRI 359
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E LIGKKLP + EEEEV+++ ERV EA+R ++M +K+
Sbjct: 360 EHLIGKKLPLYKTEEEEVMVMNERVMEAQRYARMEMKE 397
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/423 (58%), Positives = 319/423 (75%), Gaps = 15/423 (3%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+AE+ + +F++LG+ ++VEAC N+G+K P+ IQ +AIP AL+ +D+IGLAQTGSGKT
Sbjct: 114 IAEDGKKVSFQDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTA 173
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AF +PILQAL + + FFACVL+PTRELA QIS+Q EALGS I +R A +VGG+
Sbjct: 174 AFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGM 227
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DEADRLL+ DF +D+
Sbjct: 228 DMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDK 287
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
+L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV TLKQ Y F+P +K
Sbjct: 288 LLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYLFMPFAHK 347
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G +SQ RLGALNKFK
Sbjct: 348 DTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFK 407
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTARAGR+G +++LV QY
Sbjct: 408 TGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQY 467
Query: 361 ELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMTIKD-------SGNKR 411
++E +IE +IG K+ EFP ++E V+LL ERV EA R + +KD KR
Sbjct: 468 DVELLQRIEAVIGLKMTEFPGGNDKEAVMLLSERVAEAHRAAVRELKDKGVGGAGGSGKR 527
Query: 412 RRK 414
+RK
Sbjct: 528 KRK 530
>gi|58271466|ref|XP_572889.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115044|ref|XP_773820.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819312|sp|P0CR01.1|RRP3_CRYNB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|338819313|sp|P0CR00.1|RRP3_CRYNJ RecName: Full=ATP-dependent rRNA helicase RRP3
gi|50256448|gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229148|gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 484
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/405 (61%), Positives = 312/405 (77%), Gaps = 6/405 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KTF +LG+ EL AC ++G+K PS IQAEAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 33 EASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAF 92
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+LPILQ L E + FFA VL+PTRELA QIS+Q +LGSGI +R AVLVGG+DM
Sbjct: 93 SLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDM 146
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q++AL KRPHI+VATPGRLMDHL NTKGFSL +LKYLV+DEADRLL+ DF +D+IL
Sbjct: 147 MSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKIL 206
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYSTV TL Q Y +P K KD
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYSTVSTLLQHYLLLPLKNKDA 266
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+Y+ E+S+SS M+FTRT ++ L+++LR LG AIP+ G M+QS RL +LNKFK+G
Sbjct: 267 YLLYLANELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSG 326
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRTARAGR+G +I+LV QY++
Sbjct: 327 GRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDV 386
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
E +IE IGKK+ F ++E V LL + V +A R + + +++S
Sbjct: 387 EILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEMRES 431
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 322/415 (77%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K+FK+LG+ D L EAC+++G+K P++IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 43 EATTTKSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAF 102
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL++ + + F VL+PTRELA QIS+QFEALGS IS+RCAV+VGG+DM
Sbjct: 103 ALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDM 156
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL
Sbjct: 157 VSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKIL 216
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q +P K+KD
Sbjct: 217 KVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLIIPHKHKD 276
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E S +VFTRT + T+ LA +LR LG AIP+ G +SQS RLGAL KF++
Sbjct: 277 IYLIYLLNEFPGQSVIVFTRTVNETQRLANLLRALGFGAIPLHGQLSQSARLGALGKFRS 336
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGRTARAG++G A SLV QY+
Sbjct: 337 RSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLVTQYD 396
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E + +IE +GK+L E+ E+EEV++L +RV EA+R + +K+ R +KG
Sbjct: 397 VEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITEMKELHENRGKKGA 451
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/402 (59%), Positives = 315/402 (78%), Gaps = 7/402 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+E KTFKELG+ D L EACE++ +K P+ IQA++IP AL+G+D+IGLA+TGSGKT AFAL
Sbjct: 53 EEPKTFKELGIVDSLCEACESLNYKHPTSIQAKSIPVALQGRDVIGLAETGSGKTAAFAL 112
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQALLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM+
Sbjct: 113 PILQALLEKPQ------PLFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDMVP 166
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q +ALGK+PHI+VATPGRL+DHL TKGFSL +LKYLV+DEADRLL+ DF S+D+IL
Sbjct: 167 QAIALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKF 226
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCY 243
IPR R+TYLFSAT++ KV+ LQRA L++PV++ ++SKY TV TL Q Y FVP K KD Y
Sbjct: 227 IPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYIFVPHKRKDTY 286
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+Y++ E + S ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKFK G
Sbjct: 287 LIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFKGGS 346
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVA+RGLDIP+VD+V+N D+P +SK YIHRVGRTARAG++G+AIS+V QY++E
Sbjct: 347 REILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGRTARAGKSGIAISIVTQYDVE 406
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 405
Y +IE +GK+L +P E+EEV+ RV EA+R +++ +K
Sbjct: 407 IYQRIEAALGKQLETYPTEKEEVMAFQSRVEEAQRETRVEMK 448
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/415 (57%), Positives = 322/415 (77%), Gaps = 7/415 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A E+ K+FK+LG+ D L +AC N+G+ P+ IQA++IPHAL +D+IGLA+TGSGKT A
Sbjct: 46 ASEEVTKSFKDLGVADSLCDACANLGYTKPTPIQAQSIPHALANRDIIGLAETGSGKTAA 105
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALP++QALLE + AFF VL+PTRELA QI +QFEALGS ISLR AV+VGG+D
Sbjct: 106 FALPVIQALLEKPQ------AFFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLD 159
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +LKYLV+DEADRLL+ DF S+D+I
Sbjct: 160 MVAQAIALGKKPHVIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKI 219
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L IPR R+T+LFSATM+ K++ LQRA L++PV++ +S KY TV TL Q Y F+P + K
Sbjct: 220 LKFIPRERRTFLFSATMSSKIESLQRASLRDPVRVSISSNKYQTVSTLLQYYLFIPHQLK 279
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVY+ E + +VFTRT T+ LA++LR LG AIP+ G ++Q+ RLGALNKF+
Sbjct: 280 DTYLVYLANEFAGKKLVVFTRTVSETQRLAILLRTLGFGAIPLHGQLNQTARLGALNKFR 339
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AGE +IL+ TDVA+RGLDIP VD+VIN+D+ +SK ++HR+GRTARAG++G+A+SLV QY
Sbjct: 340 AGERSILVATDVAARGLDIPLVDVVINHDLAQDSKTHVHRIGRTARAGKSGIALSLVTQY 399
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+LE +L+IE +GKK E+P ++EEV++ RV EA+R ++M +K+ + +KG
Sbjct: 400 DLEIWLRIEAALGKKQDEYPTQKEEVMVFQSRVEEAQRHARMEMKNLMETKGKKG 454
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/415 (58%), Positives = 318/415 (76%), Gaps = 11/415 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL D L+EA E + +K P+ IQAEA+PHAL+G+D+IG+A TGSGKT AFALPILQ
Sbjct: 24 TFKSLGLIDPLLEALEQMKYKAPTDIQAEALPHALQGRDIIGVASTGSGKTAAFALPILQ 83
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + FACV++PTRELA QI++QFE++GS + +RCA ++GGVD+ Q +A
Sbjct: 84 KLWEDPKG------LFACVIAPTRELAFQITQQFESIGSAMGVRCATIIGGVDIQSQKIA 137
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH++VATPGRL++HL TKGFSL +LK+LVLDEADRLL+ DF LD+IL +IP+
Sbjct: 138 LAKKPHVIVATPGRLLEHLEETKGFSLRSLKFLVLDEADRLLDMDFGPILDKILKLIPKE 197
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NPV++E SKYSTV TL Q Y +P KD +L+Y+
Sbjct: 198 RTTYLFSATMTTKVAKLQRASLSNPVRVEVNSKYSTVSTLLQYYLLMPLPQKDVHLIYLA 257
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ +S ++FTRT + L++MLR+LG AIP+ G +SQS RLGAL KFKAG +IL+
Sbjct: 258 NTLAQNSMIIFTRTVHDAQRLSIMLRSLGFPAIPLHGQLSQSARLGALGKFKAGGRSILV 317
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIPSVD+VINYDIPT+SKDYIHRVGRTARAGR+G +I+LV QY++E L+I
Sbjct: 318 ATDVASRGLDIPSVDIVINYDIPTHSKDYIHRVGRTARAGRSGKSITLVTQYDVELVLRI 377
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-----NKRRRKGGDE 418
E++I KK+ +P +++EV LL ERV EA R++ +K+ G K+R++G +E
Sbjct: 378 EQVIEKKMELWPVDKDEVALLRERVDEAGRLAATELKEQGIKGGHGKKRKRGREE 432
>gi|56202232|dbj|BAD73664.1| putative DEAD box protein [Oryza sativa Japonica Group]
gi|56202381|dbj|BAD73793.1| putative DEAD box protein [Oryza sativa Japonica Group]
Length = 423
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/401 (61%), Positives = 309/401 (77%), Gaps = 22/401 (5%)
Query: 26 VGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFA 85
+GWK P++IQAE IP AL+G+D+IG+ QTGSGKT AFALPI+QALLE P FFA
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLE----HEHRPCFFA 56
Query: 86 CVLSPTRELAIQISEQFEALGSGISLRCAV-------------LVGGVDMMQQTLALGKR 132
CVL+PTRELAIQI++QFEALGS ISL+C+V L G D Q L K
Sbjct: 57 CVLAPTRELAIQIAKQFEALGSAISLQCSVVWWRSSRACLPEHLRKGFDSWQ----LWKE 112
Query: 133 PHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTY 192
+ V TPGRL+DHLTNTKGFS LKYLVLDEAD LL DF+K++D+ILNVIP+ R+T+
Sbjct: 113 RNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTF 172
Query: 193 LFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS 252
LFSATMT+KVKKL+RACLKNPVK+E ASKYS VDTL+Q VPAKYKDCYL+++L ++
Sbjct: 173 LFSATMTEKVKKLRRACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMP 232
Query: 253 ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDV 312
S MVF RTC++TRLLALMLRNL +AI ISG MSQ KRLGALN+F+ +CNIL+CTDV
Sbjct: 233 GSMIMVFVRTCESTRLLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDV 292
Query: 313 ASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI 372
ASRGLDI VD+VINYD P NSKDYIHRVGRTARAG++G A+SLVNQ+E E++ E+ +
Sbjct: 293 ASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVSLVNQFEGEFFKLTEQFL 352
Query: 373 -GKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
G+++P + +E+++L ER+ ++KRI+ T+ +SG +R
Sbjct: 353 GGEEIPARKVDADEIMILHERIYDSKRIALKTMNESGYHKR 393
>gi|116195380|ref|XP_001223502.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
gi|118595827|sp|Q2H1Q8.1|RRP3_CHAGB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|88180201|gb|EAQ87669.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
Length = 493
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/427 (56%), Positives = 325/427 (76%), Gaps = 7/427 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+EE KTF++LG+ D L +AC+ +GWK P+ IQ E+IP AL+ +D+IGLA+TGSGKTGA
Sbjct: 59 SEEPAPKTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTGA 118
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALL+ + FA VL+PTRELA QI++ FEALGS ISLRCA+++GG+D
Sbjct: 119 FALPILQALLDKPQ------PLFALVLAPTRELAAQIAQSFEALGSLISLRCALILGGLD 172
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL L+YLV+DEADRLL+ DF LD+I
Sbjct: 173 MVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDEADRLLDMDFGPILDKI 232
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 240
L +PR R+T+LFSATM+ KV+ LQRACL++P+K+ ++SKY TV TL Q Y F+P +K
Sbjct: 233 LKFLPRERRTFLFSATMSSKVESLQRACLRDPLKVSISSSKYQTVSTLVQNYVFIPHTHK 292
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YL+Y+ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF+
Sbjct: 293 DTYLIYLCNEFAGQTIIIFTRTVIETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFR 352
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG +IL+ TDVA+RGLDIP+VD V+N D+P +SK Y+HRVGRTARAGR+G AIS V QY
Sbjct: 353 AGSRDILVATDVAARGLDIPNVDCVLNLDLPGDSKTYVHRVGRTARAGRSGHAISFVTQY 412
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
+LE +L+IE +G KL E+ E+++V++ RV EA+RI++ IK + R +KG
Sbjct: 413 DLELWLRIEAALGTKLTEYSLEKDDVMVFRPRVEEAQRIAKTEIKALMDDRGKKGSVLKG 472
Query: 421 DIGRQFG 427
GR+ G
Sbjct: 473 GKGRKRG 479
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/406 (56%), Positives = 320/406 (78%), Gaps = 7/406 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A E+ K+FK+LG+ D L +AC N+G+ P+ IQA++IPHAL +D+IGLA+TGSGKT A
Sbjct: 46 AAEEVTKSFKDLGVVDSLCDACANLGYTKPTPIQAQSIPHALANRDIIGLAETGSGKTAA 105
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALP++QALLE + AFF VL+PTRELA QI +QFEALGS ISLR AV+VGG+D
Sbjct: 106 FALPVIQALLEKPQ------AFFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLD 159
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q +ALGK+PH+++ATPGRL+DHL TKGFSL +LKYLV+DEADRLL+ DF S+D+I
Sbjct: 160 MVAQAIALGKKPHVIIATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKI 219
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYK 240
L +PR R+T+LFSATM+ K++ LQRA L++PV++ +S KY TV TL Q Y F+P K
Sbjct: 220 LKFVPRERRTFLFSATMSSKIESLQRASLRDPVRVSISSNKYQTVSTLLQYYLFIPHTQK 279
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D +L+Y+L E + M+FTRT T+ LA++LR+LG AIP+ G ++Q+ RLGALNKF+
Sbjct: 280 DVHLIYLLNEHAGKKIMIFTRTVAETQRLAILLRSLGFGAIPLHGQLNQTARLGALNKFR 339
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G +IL+ TDVA+RGLD+P+VD+V+N+D+P +SK +IHR+GRTARAG++G+A+SLV QY
Sbjct: 340 TGTRSILVATDVAARGLDVPAVDVVVNHDLPQDSKTFIHRIGRTARAGKSGIALSLVTQY 399
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+LE +L+IE +GKKL E+P +++EV++ RV EA+R ++M +K+
Sbjct: 400 DLEIFLRIEAALGKKLDEYPTQKDEVMVFQNRVEEAQRHARMEMKN 445
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/433 (57%), Positives = 324/433 (74%), Gaps = 23/433 (5%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+E KTFKELG+ D L EACE++ +K P+ IQA+AIP AL+G+D+IGLA+TGSGKT AFAL
Sbjct: 55 EEPKTFKELGIVDSLCEACESLNYKRPTAIQAKAIPVALQGRDVIGLAETGSGKTAAFAL 114
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQALLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM+
Sbjct: 115 PILQALLEKPQ------PLFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDMVP 168
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q +ALGK+PHI+VATPGRL+DHL TKGFSL +LKYLV+DEADRLL+ DF S+D+IL
Sbjct: 169 QAIALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKF 228
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCY 243
IPR R+TYLFSAT++ KV+ LQRA L++PV++ ++SKY TV TL Q Y VP K KD Y
Sbjct: 229 IPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYILVPHKRKDTY 288
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+Y++ E + S ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKFK G
Sbjct: 289 LIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFKGGS 348
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVA+RGLDIP+VD+V+N D+P +SK YIHRVGRTARAG++G+AI++V QY++E
Sbjct: 349 REILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGRTARAGKSGIAINIVTQYDVE 408
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK----------------DS 407
Y +IE +GKKL +P E+EEV+ RV EA+R +++ +K
Sbjct: 409 IYQRIEAALGKKLDAYPTEKEEVMAFQSRVEEAQREARIEMKAFLENKGKGKGKGKAKAG 468
Query: 408 GNKRRRKGGDEDD 420
G+KRRR DE++
Sbjct: 469 GSKRRRDNMDEEE 481
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/409 (58%), Positives = 318/409 (77%), Gaps = 7/409 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELG+ ++L EACE +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 48 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 107
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E + FF VL+PTRELA QIS+ FE+LG+ + +R V+VGG+DM+ Q++
Sbjct: 108 QALMEKPQ------PFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSI 161
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
+LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 162 SLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPR 221
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ + SKY TV TL Q Y F+P K+KD YLVY
Sbjct: 222 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVY 281
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + ST++FTRT + T+ LA +LR LG AIP+ G +SQS RLGAL KF+A NI
Sbjct: 282 LLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARLGALGKFRARSRNI 341
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGRTARAG++G+AIS V QY++E +L
Sbjct: 342 LVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRTARAGKSGLAISFVAQYDVEVWL 401
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +GKKL E+ ++EV++L E V EA+R + M +KD K+ +G
Sbjct: 402 RIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMDMKDYNEKKGSRG 450
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/433 (56%), Positives = 327/433 (75%), Gaps = 10/433 (2%)
Query: 3 EEKEVK--TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
EE+++ TFKELG+ +EL ACE +G+K P+ IQ +++P+ L+ KD+IGLA+TGSGKT
Sbjct: 5 EEQQISSVTFKELGVCEELSSACEKLGYKIPTPIQQQSLPYTLQKKDIIGLAETGSGKTL 64
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AF LPILQ LL A Q ++A +LSPTREL +QI E F+A+G+ I+L+ V++GG+
Sbjct: 65 AFGLPILQHLL--ANPQ----PYYALILSPTRELCVQIQEHFQAIGASIALKSVVILGGM 118
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D + Q AL ++PHI++ TPG+++ HL NTKGF+L LK+LVLDEAD+LLN DFE+ ++
Sbjct: 119 DPLAQAKALAQKPHIIIGTPGKILYHLENTKGFNLKQLKFLVLDEADKLLNMDFEREINA 178
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL++IP+ R TYLFSATMT KV KLQRA LK+PVKIE +SKY TV TL+Q Y FVP KYK
Sbjct: 179 ILDIIPKERNTYLFSATMTNKVSKLQRASLKDPVKIEVSSKYQTVSTLQQNYLFVPDKYK 238
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+ YLVY+L E++ +++VF TC + L+LRNLG +AI I G MSQ+KRL + NKFK
Sbjct: 239 ETYLVYLLNELAGLTSIVFVATCQMAIKITLLLRNLGFQAIAIHGQMSQAKRLSSFNKFK 298
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ E N+LI TDVASRGLDIP VD+V+N+DIP N+K+Y+HRVGRTARAG++G AISLV QY
Sbjct: 299 SKESNLLIATDVASRGLDIPFVDLVLNFDIPQNAKEYVHRVGRTARAGKSGKAISLVTQY 358
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG-DED 419
++E Y +IE+LI K+L ++P EE +V++ ERV EA RI+ +KD K+ +K DED
Sbjct: 359 DVEMYQKIEQLIEKELSQYPLEESDVMVFYERVQEANRIATQELKDLLEKKVKKTAVDED 418
Query: 420 DDIGRQFG-INKK 431
D R+ INKK
Sbjct: 419 DLDDRKIKQINKK 431
>gi|405122110|gb|AFR96877.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus neoformans var.
grubii H99]
Length = 484
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/405 (61%), Positives = 312/405 (77%), Gaps = 6/405 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KTF +LG+ EL AC ++G+K PS IQAEAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 33 EASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAF 92
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+LPILQ L E + FFA VL+PTRELA QIS+Q +LGSGI +R AVLVGG+DM
Sbjct: 93 SLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDM 146
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q++AL KRPH++VATPGRLMDHL NTKGFSL +LKYLV+DEADRLL+ DF +D++L
Sbjct: 147 MSQSIALSKRPHVIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKVL 206
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYSTV TL Q Y +P K KD
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYSTVSTLLQHYLLLPLKNKDA 266
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+Y+ E+S+SS ++FTRT ++ L+++LR LG AIP+ G M+QS RL +LNKFK+G
Sbjct: 267 YLLYLANELSSSSMIIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSG 326
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRTARAGR+G +I+LV QY++
Sbjct: 327 GRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDV 386
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
E +IE IGKK+ F ++E V LL + V +A R + + +++S
Sbjct: 387 EILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEMRES 431
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 314/415 (75%), Gaps = 10/415 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E KTF +LG+ D L EAC +G+ P+ IQ EAIP ALEGKD+IGLA+TGSGKT AF
Sbjct: 31 DESTDKTFADLGVVDSLCEACTALGFTKPTAIQREAIPIALEGKDIIGLAETGSGKTAAF 90
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ LL+ + F VL+PTRELA QIS+QFEALGS IS+RCAV+VGG+DM
Sbjct: 91 ALPILQELLDKPQ------PMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDM 144
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +AL K+PHIVVATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 145 VPQAIALAKKPHIVVATPGRLLDHLENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKIF 204
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
V+PR R+T LFSATM+ K+ L RA L+ PVK+ ++S Y TV L Q+Y F+P K+KD
Sbjct: 205 QVLPRERRTMLFSATMSTKLNNLTRAALQQPVKVSISSSSYQTVKNLMQRYIFIPHKFKD 264
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + + +VFTRT + T +A +LR LG+ AIP+ G M+QS RLGALNKF+
Sbjct: 265 IYLVYLLNEFAGQTCIVFTRTINETARIAFLLRALGRSAIPLHGQMNQSARLGALNKFRG 324
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK Y+HRVGRTARAG++GVAIS+V QY+
Sbjct: 325 GHRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKSGVAISVVTQYD 384
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E Y +IEK +GKKL E P E +EV++ RV EA+RI+ +K N+ ++GG
Sbjct: 385 IEIYQRIEKALGKKLEEHPTERDEVMVFAPRVGEAQRIAVTEMK---NEHEKRGG 436
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/408 (60%), Positives = 306/408 (75%), Gaps = 6/408 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL D L++A E V K P+ IQ E IPHALEGKD+IG+A TGSGKT AFALPILQ
Sbjct: 16 TFKSLGLIDSLLQALEQVNHKVPTDIQTEVIPHALEGKDIIGVASTGSGKTAAFALPILQ 75
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + FACVL+PTRELA QIS+QFE+LGS + +RCAV+VGGV + Q +A
Sbjct: 76 KLWEEPK------GLFACVLAPTRELAYQISQQFESLGSDMGVRCAVIVGGVPTVPQAVA 129
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH+VVATPGRL+ HL TKGF L LK+LVLDEADRLL+ DF + +D+IL VIP+
Sbjct: 130 LAKKPHVVVATPGRLLWHLQETKGFGLANLKFLVLDEADRLLDMDFGQVIDDILKVIPKQ 189
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA LKNPV++E A KY TV TL Q Y F+P K KD LVY++
Sbjct: 190 RTTYLFSATMTSKVAKLQRASLKNPVRVEVAGKYQTVSTLLQYYLFIPLKDKDVNLVYLV 249
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ +S ++FTRT L ++LR LG A+P+ G +SQS+RLGAL KFK+G IL+
Sbjct: 250 NALAQNSIIIFTRTVHDAARLTIVLRTLGFSAVPLHGQLSQSQRLGALAKFKSGGRKILV 309
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+LV QY++E +I
Sbjct: 310 ATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRTARAGRSGKSITLVTQYDVELVQRI 369
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
E +I KK+ +P E+EE+ LL ERV EA RI+ +K+ +K RK G
Sbjct: 370 ESVIEKKMELWPTEKEEIALLTERVNEAGRIAANELKEQDSKGGRKRG 417
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/409 (58%), Positives = 318/409 (77%), Gaps = 7/409 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELG+ ++L EACE +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 48 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPIL 107
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E + FF VL+PTRELA QIS+ FE+LG+ + +R V+VGG+DM+ Q++
Sbjct: 108 QALMEKPQ------PFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSI 161
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
+LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 162 SLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPR 221
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ + SKY TV TL Q Y F+P K+KD YLVY
Sbjct: 222 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVY 281
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + ST++FTRT + T+ LA +LR LG AIP+ G +SQS RLGAL KF+A NI
Sbjct: 282 LLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARLGALGKFRARSRNI 341
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGRTARAG++G+AIS V QY++E +L
Sbjct: 342 LVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRTARAGKSGLAISFVAQYDVEVWL 401
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +GKKL E+ ++EV++L E V EA+R + M +KD K+ +G
Sbjct: 402 RIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMDMKDYNEKKGSRG 450
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/414 (57%), Positives = 319/414 (77%), Gaps = 7/414 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E+ KTFK+LG+ D L EACE + +K P+ IQ ++IP ALEG+D+IGLA+TGSGKT AF
Sbjct: 55 EDAPKKTFKDLGIVDALCEACEKLNYKYPTPIQEKSIPVALEGRDIIGLAETGSGKTAAF 114
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP+LQALL+ + F VL+PTRELA QI + FEALGS ISLRCAV+VGG+DM
Sbjct: 115 ALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDM 168
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL TLKYL++DEADRLL+ DF S+D+IL
Sbjct: 169 VPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKIL 228
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
IPR R+TYLFSAT++ K++ LQRA L++PV++ +S KY TV TL Q Y F+P KD
Sbjct: 229 KFIPRERRTYLFSATISSKIESLQRASLRDPVRVSISSNKYQTVSTLLQHYIFIPHVRKD 288
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y++ E ST++FTRT T+ ++++LR LG AIP+ G +SQ+ RLGALNKF++
Sbjct: 289 VYLIYLINEHVGKSTIIFTRTVWETQRISILLRTLGFGAIPLHGQLSQTSRLGALNKFRS 348
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++G+AIS+V QY+
Sbjct: 349 GTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGIAISVVTQYD 408
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+E + +IE +GKKL E+P E+EEV RV EA+R +++ +K +R +KG
Sbjct: 409 VEIFTRIEAALGKKLTEYPTEKEEVFTFQTRVEEAQRHARVEMKSFTEERGKKG 462
>gi|321262460|ref|XP_003195949.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317462423|gb|ADV24162.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 484
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/405 (61%), Positives = 311/405 (76%), Gaps = 6/405 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K+F +LG+ EL AC ++G+K PS IQAEAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 33 EASHNKSFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAF 92
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+LPILQ L E + FFA VL+PTRELA QIS+Q +LGSGI +R AVLVGG+DM
Sbjct: 93 SLPILQTLWENPQ------PFFALVLAPTRELAYQISQQITSLGSGIGVRTAVLVGGMDM 146
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q++AL KRPH++VATPGRLMDHL NTKGFSL +LKYLV+DEADRLL+ DF +D++L
Sbjct: 147 MSQSIALSKRPHVIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKVL 206
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYSTV TL Q Y +P K KD
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYSTVSTLLQHYLLLPLKNKDS 266
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+Y+ E+S+SS ++FTRT ++ L+++LR LG AIP+ G M+QS RL +LNKFK+G
Sbjct: 267 YLLYLANELSSSSMIIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSG 326
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRTARAGR+G +I+LV QY++
Sbjct: 327 GRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDV 386
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
E +IE IGKK+ F ++E V LL + V A R + + I++S
Sbjct: 387 EILQRIESHIGKKMTSFDVDKEAVALLTDTVARANREAALEIRES 431
>gi|432871166|ref|XP_004071865.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Oryzias latipes]
Length = 439
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/431 (58%), Positives = 313/431 (72%), Gaps = 59/431 (13%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E VKTFK+LG+ D L EAC+ +GWK+P+KIQ EAIP AL+GKD+IGLA+TGSGKTGAFA
Sbjct: 35 EAAVKTFKDLGVTDVLCEACDQLGWKSPTKIQVEAIPVALQGKDVIGLAETGSGKTGAFA 94
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ+LL A QR VL+PTRELA QISEQFEALGS I ++CAV+VGG+DMM
Sbjct: 95 LPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMM 148
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+L L K+PHIV+ATPGRL+DH+ NTKGFSL LK+LV+DEADR+LN DFE +D+IL
Sbjct: 149 SQSLVLAKKPHIVIATPGRLIDHMENTKGFSLRALKFLVMDEADRILNMDFETEVDKILK 208
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK ++KYSTVD L+Q Y F+PAKYK+
Sbjct: 209 VIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYSTVDKLQQYYVFIPAKYKN-- 266
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
KRLGALNKFK+
Sbjct: 267 -----------------------------------------------KRLGALNKFKSKS 279
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E
Sbjct: 280 RSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVE 339
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDEDD 420
+ +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +K+ G KR+R + GDE D
Sbjct: 340 LFQRIESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARVEMKEQGEKRKRPRGRDGDE-D 398
Query: 421 DIGRQFGINKK 431
D + G+ KK
Sbjct: 399 DTEQASGVRKK 409
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/449 (56%), Positives = 323/449 (71%), Gaps = 32/449 (7%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LG+ ++VEAC N+G+K P+ IQ ++IP AL+ +D+IGLAQTGSGKT AF +PILQA
Sbjct: 111 FSDLGVIPQIVEACTNMGFKHPTPIQVKSIPEALQSRDVIGLAQTGSGKTAAFTIPILQA 170
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + FFACVL+PTRELA QIS+Q EALGS I +R A +VGG+DMM Q++AL
Sbjct: 171 LWDNPK------PFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIAL 224
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPH++VATPGRL DHL NTKGFSL L+YLV+DEADRLL+ DF +D++L IPR R
Sbjct: 225 SKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRER 284
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
+T LFSATMT KV KLQRA LKNPV++E +KY+TV TLKQ Y F+P +KD YLV++
Sbjct: 285 RTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYLFMPFAHKDTYLVHLAN 344
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E + S +VFTRT ++ L+++LR LG AIP+ G +SQ RLGALNKFK G +IL+
Sbjct: 345 EQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFKTGGRSILVA 404
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTARAGR+G +++LV QY++E +IE
Sbjct: 405 TDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQYDVELLQRIE 464
Query: 370 KLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMTIKD-------SGNKRRRKG----G 416
+I K+ EFP ++E V+LL ERV EA R + +KD KR+RK G
Sbjct: 465 AVIALKMTEFPGGNDKEAVMLLSERVAEAHRAAVRELKDKGVGGAGGSGKRKRKMDGKYG 524
Query: 417 DE---DDDI----------GRQFGINKKK 432
DE DDD GR N+KK
Sbjct: 525 DEMDRDDDQVQPGMPVSGNGRHMNQNRKK 553
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/412 (57%), Positives = 321/412 (77%), Gaps = 7/412 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+ KTFK+LG+ D LVEAC+ +G+ P+ IQA++IPHAL+ +D+IGLA+TGSGKT AFAL
Sbjct: 50 ESAKTFKDLGIVDSLVEACDRLGYTNPTPIQAQSIPHALQNRDVIGLAETGSGKTAAFAL 109
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PI+QALL+ + F VL+PTRELA QI+ FEALGS ++LR AV+VGG+DM+
Sbjct: 110 PIIQALLDKPSH------LFGLVLAPTRELAAQIAASFEALGSLVNLRVAVIVGGLDMVA 163
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q +ALGK+PHIVVATPGRL+DHL TKGFSL +LKYLV+DEADRLL+ DF S+D+IL
Sbjct: 164 QAIALGKKPHIVVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKF 223
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCY 243
IPR R+T+LFSATM+ K++ LQRA L++PV+I ++S + TV TL Q Y F P KD Y
Sbjct: 224 IPRERRTFLFSATMSSKIESLQRASLRDPVRISISSSSHQTVSTLIQNYIFCPHNKKDTY 283
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVY++ E S ++FTRT T+ LA++LR LG AIPI G ++Q+ RLGALNKF+AG
Sbjct: 284 LVYLVNEYSGKKIVLFTRTVTETQRLAILLRTLGFGAIPIHGQLNQTARLGALNKFRAGS 343
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL+ TDVA+RGLDIP VD+VIN+DIP++SK Y+HRVGRTARAG++G AI+++ QY+LE
Sbjct: 344 RDILVATDVAARGLDIPLVDVVINFDIPSDSKTYVHRVGRTARAGKSGKAITIMTQYDLE 403
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
YL+IE +GKKLPE+P +++EV + RV EA+R++++ +K+ + + ++G
Sbjct: 404 IYLRIEAALGKKLPEYPTQKDEVDVFQTRVEEAQRVARIEMKNMMDAKGKRG 455
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/438 (57%), Positives = 327/438 (74%), Gaps = 22/438 (5%)
Query: 3 EEKEVKTFKEL-------GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTG 55
E + KTFKEL G+ D L EACE +G+KTP+ IQA++IP AL+G+D+IGLA+TG
Sbjct: 46 EAEPPKTFKELANTPHHQGIVDALCEACETLGYKTPTGIQAQSIPVALQGRDVIGLAETG 105
Query: 56 SGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAV 115
SGKT AFALP+LQALL+ + F VL+PTRELA QI + FEALG+ ISLRCAV
Sbjct: 106 SGKTAAFALPVLQALLDKPQ------PLFGLVLAPTRELAAQIGQTFEALGALISLRCAV 159
Query: 116 LVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFE 175
+VGG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL TLKYLVLDEADRLL+ DF
Sbjct: 160 IVGGLDMVPQAVALGKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLVLDEADRLLDMDFG 219
Query: 176 KSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRF 234
+S++++L IPR R+TYLFSATM+ V+ LQRA L++PV++ +ASKY TV TLKQ Y F
Sbjct: 220 ESIEKLLKFIPRERRTYLFSATMSSSVESLQRASLRDPVRVSVSASKYQTVSTLKQHYVF 279
Query: 235 VPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
+P K KD YL++I+ E + S +VFTRT T+ A++LR LG AIP+ G +SQS RLG
Sbjct: 280 IPHKRKDTYLIHIINEFAGKSCIVFTRTVYETQRCAVLLRTLGFGAIPLHGQLSQSARLG 339
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
ALNKF+ G IL+ TDVA+RGLDIP VD+++NYDIP++SK YIHRVGRTARAG++GVAI
Sbjct: 340 ALNKFRGGTREILVATDVAARGLDIPKVDVILNYDIPSDSKTYIHRVGRTARAGKSGVAI 399
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ---MTIKDSGNK- 410
S+V Q+++E + +IE +GKKL EF +EEEV+ RV EA+R ++ I +S NK
Sbjct: 400 SIVTQFDIELFTRIEAALGKKLDEFDTKEEEVMTFQSRVQEAQRHARNEMNNIMESRNKG 459
Query: 411 -RRRKGGDED---DDIGR 424
RKG D DD+ R
Sbjct: 460 ATMRKGRDNKRRRDDMDR 477
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/416 (58%), Positives = 320/416 (76%), Gaps = 7/416 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AE+ KTFK+LG+ D L EACE++G+K+P+ IQ E+IP AL G+DLIGLA+TGSGKT A
Sbjct: 53 AEDVAPKTFKDLGVIDSLCEACESLGYKSPTPIQQESIPPALAGRDLIGLAETGSGKTAA 112
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALL+ + F VL+PTRELA QIS+ FE LG IS+RCAV+VGG+D
Sbjct: 113 FALPILQALLDKPQ------PLFGLVLAPTRELAYQISKSFEGLGILISVRCAVIVGGMD 166
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 167 MVTQSIALGKKPHIIVATPGRLLDHLENTKGFSLRALKYLVMDEADRLLDLDFGPILDKI 226
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSATM+ KV+ LQRA L++P++++ + +KY TV TL Q Y F+P +K
Sbjct: 227 LKVLPRERRTYLFSATMSSKVESLQRASLRDPLRVQISTNKYQTVSTLLQSYLFIPHPHK 286
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YL+Y+L + + S +VFTRT + T+ LA++LR LG AIP+ G +SQS RLGALNKF+
Sbjct: 287 DTYLIYLLNDFAGQSAIVFTRTVNETQRLAILLRTLGFGAIPLHGQLSQSARLGALNKFR 346
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++G AIS+V QY
Sbjct: 347 AGSREILVATDVAARGLDIPSVDVVLNYDLPPDSKTYIHRVGRTARAGKSGHAISIVTQY 406
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
++E +L+IE +G K E+ ++EV++ RV EA+R ++ +K+ R KG
Sbjct: 407 DVEIWLRIEAALGMKQNEYKYVKDEVMVFKARVEEAQRHARNEMKNLHEDRGNKGA 462
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/400 (59%), Positives = 314/400 (78%), Gaps = 7/400 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELG+ ++L EACE +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 52 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E + FF +L+PTRELA QIS+ FE+LG+ + +R V+VGG+DM+ Q++
Sbjct: 112 QALMEKPQ------PFFGLILAPTRELAYQISKSFESLGASLGVRSCVIVGGMDMVSQSI 165
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
+LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 166 SLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPR 225
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ + SKY TV TL Q Y F+P K+KD YLVY
Sbjct: 226 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVY 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + ST++FTRT + T+ LA +LR LG AIP+ G +SQS RLGAL KF+A NI
Sbjct: 286 LLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARLGALGKFRARSRNI 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGRTARAG++G+AIS V QY++E +L
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRTARAGKSGLAISFVAQYDVEVWL 405
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+IE +GKKL E+ ++EV++L E V EA+R + M +KD
Sbjct: 406 RIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMDMKD 445
>gi|348569356|ref|XP_003470464.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Cavia porcellus]
Length = 406
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/425 (58%), Positives = 307/425 (72%), Gaps = 58/425 (13%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 17 AEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPMALQGRDIIGLAETGSGKTGA 76
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 77 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 130
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 131 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 190
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFK- 249
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
SKRLG+LNKFKA
Sbjct: 250 ------------------------------------------------SKRLGSLNKFKA 261
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY+
Sbjct: 262 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 321
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDE 418
+E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD
Sbjct: 322 VELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDAGDN 381
Query: 419 DDDIG 423
DD G
Sbjct: 382 DDTEG 386
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/346 (68%), Positives = 285/346 (82%), Gaps = 6/346 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 72 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 131
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 132 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDS 185
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 186 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 245
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 246 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 305
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 306 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 365
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAG 348
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAG
Sbjct: 366 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAG 411
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/410 (58%), Positives = 312/410 (76%), Gaps = 7/410 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +LG+ + LVEA E +G+K P+ IQ ++IP ALEG+D+IGLA+TGSGKT AFALP+L
Sbjct: 61 KSFADLGVVESLVEATEALGYKHPTPIQEKSIPLALEGRDVIGLAETGSGKTAAFALPVL 120
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALLE FA V++PTRELA QI++ FEALGS I+LRCAV+VGG+DM+QQ +
Sbjct: 121 QALLEKPSG------LFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQAI 174
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PH+VVATPGRL+DHL TKGFSL +LKYLVLDEADRLL+ DF S+D+IL IPR
Sbjct: 175 ALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKILKFIPR 234
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK-YSTVDTLKQQYRFVPAKYKDCYLVY 246
R TYLFSATM+ KV+ LQRA LK+P ++ S Y V TL Q Y F+P KD Y V+
Sbjct: 235 ERHTYLFSATMSSKVESLQRASLKDPARVSVQSNGYQVVSTLLQNYLFIPHALKDVYCVH 294
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ +T+VF RT T+ LA++LR LG A+P+ G +SQS RLGALNKF+AG +I
Sbjct: 295 LINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALPLHGQLSQSARLGALNKFRAGSRDI 354
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIP+VD+VINYD+P +SK YIHRVGRTARAG++G A+SLV QY+LE +L
Sbjct: 355 LVATDVAARGLDIPNVDVVINYDLPQDSKTYIHRVGRTARAGKSGRALSLVTQYDLEIWL 414
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+IE +GKKL EFP E++EV++ RV EA+R +++ +K R +KG
Sbjct: 415 RIEASMGKKLDEFPTEKDEVMVFQARVEEAQRHARIEMKHLMENRGKKGA 464
>gi|449547391|gb|EMD38359.1| hypothetical protein CERSUDRAFT_49063 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/413 (58%), Positives = 310/413 (75%), Gaps = 12/413 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ LGL + L+EA + + + TP++IQAE +PHAL+G+D+IG+A TGSGKT AFALPILQ
Sbjct: 15 FRSLGLIEPLLEAVDQLHYTTPTEIQAEVLPHALQGRDIIGVAATGSGKTAAFALPILQK 74
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E + FACV++PTRELA QIS+QFE+LGS I +RCA +VGG+ +M Q +AL
Sbjct: 75 LWEEPKG------LFACVMAPTRELAYQISQQFESLGSAIGVRCATIVGGMPIMDQAVAL 128
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHIVVATPGRL DHL NTKGFSL LK+LV+DEADRLL+ DF +D+IL VIP+ R
Sbjct: 129 AKRPHIVVATPGRLNDHLENTKGFSLRGLKFLVMDEADRLLDMDFGPIIDKILKVIPKER 188
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
TYLFSATMT KV KLQRA L NPV++E + KYSTV TL Q Y F+P KD +L+Y+
Sbjct: 189 TTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYSTVSTLLQYYLFIPLVQKDVHLIYLAN 248
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
++ +S ++FTRT + L+++LR LG A+P+ G +SQS RLGAL KFK+G +L+
Sbjct: 249 SLAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLHGQLSQSARLGALGKFKSGGRKVLVA 308
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIPSVD+VINYDIPT+SKDYIHRVGRTARAGR+G +++LV QY++E +IE
Sbjct: 309 TDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTLVTQYDVELVQRIE 368
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS------GNKRRRKGG 416
IGKK+ +P + EE+ LL ERV EA R++ +K+ G KRRR+ G
Sbjct: 369 ATIGKKMELWPTDAEEIALLRERVDEAGRVAVTELKEQGINGGHGRKRRREEG 421
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/411 (58%), Positives = 308/411 (74%), Gaps = 12/411 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ LGL D L+EA E + +K P+ IQ EA+PHAL+G+D+IG+A TGSGKT AFALPILQ
Sbjct: 539 FRSLGLIDPLLEALEQLNFKHPTDIQVEALPHALQGRDIIGVASTGSGKTAAFALPILQK 598
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E + FACVL+PTRELA QIS+QFE LGS + +RC +VGG+DMM Q++AL
Sbjct: 599 LWEEPK------GLFACVLAPTRELAYQISQQFEGLGSAMGVRCVTIVGGLDMMAQSVAL 652
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHIVVATPGRL+DHL NTKGFSL LK+LVLDEADRLL+ DF +D+IL +IP+ R
Sbjct: 653 AKRPHIVVATPGRLIDHLENTKGFSLRGLKFLVLDEADRLLDMDFGPIIDKILKIIPKER 712
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
TYLFSATMT KV KLQRA L NPV++E + KYSTV TL Q Y F+P KD +L+Y+
Sbjct: 713 TTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYSTVSTLLQYYLFIPLVQKDVHLIYLAN 772
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
++ +S ++FTRT + L+++LR LG A+P+ G +SQS RLGAL KFK+G IL+
Sbjct: 773 TLAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLHGQLSQSARLGALGKFKSGGRKILVA 832
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIP VD+VINYDIPT+SKDYIHRVGRTARAGR+G +++LV QY++E +IE
Sbjct: 833 TDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSVTLVTQYDVELIQRIE 892
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRIS------QMTIKDSGNKRRRK 414
IGKK+ +P + EE+ LL ERV EA R++ Q +K S + R+R+
Sbjct: 893 TTIGKKMELWPTDAEEIALLRERVDEASRVAINELKEQAGMKKSVHGRKRR 943
>gi|395538709|ref|XP_003771317.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Sarcophilus harrisii]
Length = 411
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/412 (58%), Positives = 302/412 (73%), Gaps = 55/412 (13%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AE +E KTFK+LG+ + L +AC+ +GWKTP+KIQ EAIP ALEG+D+IGLA+TGSGKTGA
Sbjct: 19 AEVQETKTFKDLGVTEVLCDACDQLGWKTPTKIQIEAIPMALEGRDIIGLAETGSGKTGA 78
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FFA VL+PTRELA QISEQFEALGS I + CAV+VGG+D
Sbjct: 79 FALPILNALLETPQR------FFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGID 132
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 133 SMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 192
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L +IPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K+
Sbjct: 193 LKLIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKN 252
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
KRLG+LNKFKA
Sbjct: 253 -------------------------------------------------KRLGSLNKFKA 263
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY+
Sbjct: 264 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYD 323
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
+E Y +IE LIGKKLP FP +EEEV+LL ERV EA+R ++M +++ G KR+R
Sbjct: 324 VELYQRIEHLIGKKLPAFPTQEEEVMLLTERVAEAQRFARMEMREQGEKRKR 375
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/410 (58%), Positives = 317/410 (77%), Gaps = 7/410 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D L EAC+ +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 56 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 115
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL+ + F VL+PTRELA QIS+ FEALGS I ++CAV+VGG+DM+ Q +
Sbjct: 116 QSLLDKPQ------PLFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAI 169
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 170 ALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLPR 229
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY TV TL Q Y F+P +KD YL+Y
Sbjct: 230 ERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLVHKDTYLIY 289
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + S ++FTRT + T+ +A++LR LG AIP+ G +SQS RLGALNKF+AG I
Sbjct: 290 LLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREI 349
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++G AIS V QY++E ++
Sbjct: 350 LVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHRVGRTARAGKSGHAISFVTQYDVEIWM 409
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+IE +GKK E+ ++EV++ RV EA+R ++ +K+ R +KG
Sbjct: 410 RIEAALGKKQEEYQTVKDEVMVFKPRVEEAQRHARNEMKNLHEDRGKKGA 459
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/408 (58%), Positives = 312/408 (76%), Gaps = 7/408 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E KTF +LG+R+EL +AC+++ +K P+ IQ EAIP ALEGKD+IGLA+TGSGKT AF
Sbjct: 69 DEAAEKTFADLGVREELCDACDSLNFKRPTAIQREAIPIALEGKDIIGLAETGSGKTAAF 128
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQALL+ + F +L+PTRELA QIS+QFEALGS IS+RCAV+VGG+DM
Sbjct: 129 ALPILQALLDKPQ------PLFGLILAPTRELAYQISQQFEALGSLISVRCAVIVGGMDM 182
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +AL K+PHIVVATPGRL+DH+ NTKGFS+ KYLV+DEADRLL+ DF LD+IL
Sbjct: 183 VPQAVALAKKPHIVVATPGRLLDHMENTKGFSVKHFKYLVMDEADRLLDLDFGPILDKIL 242
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
+ R R+T LFSATM+ K+ L RA L+NPV++ + S Y TV L Q+Y F+P KYKD
Sbjct: 243 QELNRDRRTMLFSATMSTKLNSLTRAALQNPVRVSISESSYQTVKNLMQRYMFIPHKYKD 302
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + + ++FTRT T+ +A +LR LG+ AIP+ G M+QS RLGALNKF+
Sbjct: 303 IYLVYLLDEFAGKTCIIFTRTIHETQRIAYVLRALGRSAIPLHGQMNQSARLGALNKFRG 362
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK Y+HRVGRTARAG++GVAIS+V QY+
Sbjct: 363 GSRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGRTARAGKSGVAISIVTQYD 422
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN 409
+E Y +IEK +GKKL E E EEV++ RV EA+R++ +K+ +
Sbjct: 423 IEIYQRIEKALGKKLEEHATEREEVMVFAPRVAEAQRVAITELKNDAD 470
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/428 (57%), Positives = 321/428 (75%), Gaps = 9/428 (2%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K KTFK+LGL +L EAC+ +G+K P+ IQ EAIP AL+ +DLIGLA+TGSGKT AFAL
Sbjct: 49 KAPKTFKDLGLIPQLCEACDTLGYKAPTAIQTEAIPLALQNRDLIGLAETGSGKTAAFAL 108
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQAL++ + FF VL+PTRELA QISE FEALGS IS+R VLVGG+DM+
Sbjct: 109 PILQALMDKPQ------PFFGLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVP 162
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q +A+GKRPHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF +D+IL V
Sbjct: 163 QAIAIGKRPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKV 222
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCY 243
+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P K+KD +
Sbjct: 223 LPRERRTFLFSATMSSKVEGLQRASLSNPLRVSVSSNKYQTVSTLLQYYLFIPHKHKDVH 282
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S ++FTRT T L ++ R LG AI + G +SQS RLGAL KF++
Sbjct: 283 LIWLLNEHVGQSVIIFTRTVHETMRLTILARALGFGAIALHGQLSQSARLGALGKFRSRS 342
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+ILI TDVA+RGLDIPSVD+V+NYD+ +SK ++HR+GRTARAG++G AISLV QY++E
Sbjct: 343 RDILIATDVAARGLDIPSVDLVLNYDLAADSKTHVHRIGRTARAGKSGKAISLVTQYDVE 402
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIG 423
+L+IEK + +KLPE+ E+EEVL+L +RV EA+R + +KD R+ GG G
Sbjct: 403 VWLRIEKALDRKLPEYKVEKEEVLILSDRVAEAQRQAITELKDL--DERKNGGRGSGPKG 460
Query: 424 RQFGINKK 431
R+FG K+
Sbjct: 461 RRFGNGKR 468
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/415 (60%), Positives = 325/415 (78%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E K+FK+LG+ D L EACE +G+K+P+ IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 51 DEAVTKSFKDLGIIDSLCEACETLGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAF 110
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL+E ++ F +L+PTRELA QIS FEALGS IS+RCAV+VGG+DM
Sbjct: 111 ALPILQALMEKPQS------LFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDM 164
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHIVVATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL
Sbjct: 165 VPQAIALGKKPHIVVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKIL 224
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
V+PR R+TYLFSATM+ KV+ LQRA L NP+++ ++SKY TV TL Q Y F+P KYKD
Sbjct: 225 KVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVSTLLQSYLFIPHKYKD 284
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + S +VFTRT + T+ LA++LR LG AIP+ G +SQS RLGAL+KF++
Sbjct: 285 LYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGAIPLHGQLSQSSRLGALSKFRS 344
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGRTARAG++G A ++V QY+
Sbjct: 345 RSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRTARAGKSGHAFNIVTQYD 404
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
LE +L+IE +GKKL E+ E+EEV++L +RV EA+R + +KD KR +G
Sbjct: 405 LEVWLRIENALGKKLEEYKVEKEEVMVLSDRVGEAQRHAITEMKDLHEKRGSRGA 459
>gi|164661763|ref|XP_001732004.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
gi|159105905|gb|EDP44790.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
Length = 470
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/423 (57%), Positives = 319/423 (75%), Gaps = 16/423 (3%)
Query: 2 AEEKE-VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
AEE E +F +LG+ + + EACE + + P+ IQA+AIPHAL+G+D+IGLAQTGSGKT
Sbjct: 18 AEEHEKASSFSDLGVIEPICEACEKLHFSAPTDIQAQAIPHALQGRDVIGLAQTGSGKTA 77
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AF++PILQ L + FAC+L+PTREL+ QIS+Q EALG+ I +RCA +VGG+
Sbjct: 78 AFSIPILQGLWDDPR------PLFACILAPTRELSYQISQQIEALGATIGVRCATIVGGM 131
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q++AL KRPH++VATPGRL DHL NTKGFSL +L+YLV+DEADRLL+ DF +D+
Sbjct: 132 DMMTQSIALSKRPHVIVATPGRLQDHLENTKGFSLRSLRYLVMDEADRLLDLDFGPIIDK 191
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
+L IP+ R+T LFSATMT KV KLQRA L+NPV+IE +KYSTV TL+Q Y F+P +K
Sbjct: 192 LLQNIPKERRTMLFSATMTTKVAKLQRASLRNPVRIEIGTKYSTVSTLQQYYLFMPFAHK 251
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV++ E S +VFTRT + LA++LR LG AIP+ G +SQ+ RLGALNKFK
Sbjct: 252 DTYLVHLANEQVGHSIIVFTRTVHDAQRLAVLLRLLGFSAIPLHGQLSQTARLGALNKFK 311
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG +I++CTDVA+RGLDIP+VD+V+N+DIPT+SKDYIHRVGRTARAGR G +++LV QY
Sbjct: 312 AGGRSIMVCTDVAARGLDIPAVDLVVNFDIPTHSKDYIHRVGRTARAGRQGRSVTLVTQY 371
Query: 361 ELEWYLQIEKLIGKKLPEFP--AEEEEVLLLLERVTEAKR--ISQMTIKDSGN-----KR 411
++E +IE IGK+L EFP + + ++LL ERV EA+R I ++ K GN +R
Sbjct: 372 DVELLQRIEAAIGKRLDEFPGAGDRDMIMLLSERVGEAQRAAIRELQEKGFGNAGGAGRR 431
Query: 412 RRK 414
+RK
Sbjct: 432 KRK 434
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/409 (58%), Positives = 316/409 (77%), Gaps = 8/409 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKELG+ D L EACE++G+K P+ IQAEAIP AL+G+DLIGLA+TGSGKT AF LPILQ
Sbjct: 52 TFKELGIIDSLCEACESLGYKAPTPIQAEAIPLALQGRDLIGLAETGSGKTAAFVLPILQ 111
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
AL++ + + +L+PTRELA QISE EALGS I++RCAVLVGG+DM+ Q +A
Sbjct: 112 ALMDKPQQ------LHSLILAPTRELAYQISEAVEALGSLIAVRCAVLVGGMDMITQAIA 165
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
LGK+PH++VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL ++PR
Sbjct: 166 LGKKPHVIVATPGRLLDHLENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKILKILPRE 225
Query: 189 -RQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSATM+ KV+ LQRA L NP+++ + KY TV TL Q Y F+P K+KD YL++
Sbjct: 226 GRKTYLFSATMSSKVESLQRASLSNPLRVAVSQDKYQTVSTLIQSYLFIPHKHKDLYLIH 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
IL E + + ++FTRT + + ++++LR LG AIPI G +SQ RL ALNKF+A N+
Sbjct: 286 ILNEHAGHTGIIFTRTVNEAQRVSILLRTLGFSAIPIHGQLSQQARLAALNKFRAKSRNL 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ +DVA+RGLDIPSVD+VIN+D+P +SK YIHRVGRTARAG++G+AIS V QY++E +L
Sbjct: 346 LVASDVAARGLDIPSVDLVINFDLPQDSKTYIHRVGRTARAGKSGLAISFVTQYDVELWL 405
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +GKKL E+ +EEV++L ERV +A+R + + +K+ R +KG
Sbjct: 406 RIEGALGKKLDEYKTVKEEVMVLAERVGDAQRAAALEMKELHENRGKKG 454
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/413 (58%), Positives = 317/413 (76%), Gaps = 7/413 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
+ + KTFKELG+ D L EACE++ +K P+ IQ ++IP AL+ +D+IGLA+TGSGKT AFA
Sbjct: 53 DTQPKTFKELGIVDSLCEACESLNYKFPTPIQEKSIPIALQDRDIIGLAETGSGKTAAFA 112
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQALL+ + F VL+PTRELA QI + FEALGS ISLRCAV+VGG+DM+
Sbjct: 113 LPILQALLDKPQ------PLFGLVLAPTRELAHQIGQAFEALGSSISLRCAVIVGGLDMV 166
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +ALGK+PHI+VATPGRL+DHL TKGFSL TLKYLV+DEADRLL+ DF ++D++L
Sbjct: 167 PQAVALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPAIDKLLK 226
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDC 242
IPR R+TYLFSAT++ KV+ LQRA L++PV++ +S KY TV TL Q VP K KD
Sbjct: 227 FIPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSNKYQTVSTLLQNLLVVPQKRKDT 286
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+Y++ E + ST+VFTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF++G
Sbjct: 287 YLIYLVNEFTGKSTIVFTRTVWETQRIAILLRTLGFGAIPLHGQLSQSARLGALNKFRSG 346
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVA+RGLDI VD+V+NYD+P +SK YIHRVGRTARAG++G+AISLV QY++
Sbjct: 347 TRDILVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRTARAGKSGIAISLVTQYDI 406
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
E + +IE +GKKL +P E+EEVL RV EA+R +++ +K K+ R+G
Sbjct: 407 EIFQRIEAALGKKLDIYPTEKEEVLAFQHRVEEAQREARIEMKSLSEKKDRRG 459
>gi|443917623|gb|ELU38297.1| ATP-dependent rRNA helicase RRP3 [Rhizoctonia solani AG-1 IA]
Length = 1028
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/399 (61%), Positives = 309/399 (77%), Gaps = 8/399 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL L+EA + VG+ P++IQA IPHALEGKD+IG+A+TGSGKT AFALPILQ
Sbjct: 97 TFDSLGLISPLLEALKQVGYSKPTEIQAGIIPHALEGKDVIGVAETGSGKTAAFALPILQ 156
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + FACVL+PTRELA QI++QFEALGS I +RCA +VGG+DMM Q++A
Sbjct: 157 KLWDEPR------GLFACVLAPTRELAYQIAQQFEALGSAIGVRCATIVGGMDMMSQSIA 210
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
LGK PHI+VATPGRL DHL NTKGFSL L+YLVLDEADRLL+ DF +D+IL V+PR
Sbjct: 211 LGK-PHIIVATPGRLNDHLENTKGFSLRGLRYLVLDEADRLLDMDFGPVIDKILKVLPRE 269
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R T+LFSATM+ KV KLQRA L+NPV++E KYSTV TL Q Y P KD +LV++
Sbjct: 270 RNTFLFSATMSTKVAKLQRASLQNPVRVEVNGKYSTVSTLLQYYLLTPFANKDVHLVHLA 329
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++A+S ++FTRT + L+++LRNLG A+P+ G +SQS RLGALNKFKAG ++LI
Sbjct: 330 NELAANSIIIFTRTVHDAQRLSMVLRNLGFPAVPLHGQLSQSARLGALNKFKAGGRSLLI 389
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVAS GLDIP+VD+VIN+DIPT+SKDYIHRVGRTARAGR G +I+LV QY++E +I
Sbjct: 390 ATDVAS-GLDIPTVDVVINFDIPTHSKDYIHRVGRTARAGRAGKSITLVTQYDVELLQRI 448
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
E +IGKK+ EFP ++ EV+LL ERV EA+R++ +K+S
Sbjct: 449 EGVIGKKMMEFPIDKAEVMLLKERVGEAQRLAVQELKES 487
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/410 (58%), Positives = 311/410 (75%), Gaps = 7/410 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +LG+ + LVEA E +G+K P+ IQ ++IP AL G+D+IGLA+TGSGKT AFALP+L
Sbjct: 61 KSFADLGVVESLVEATEALGYKHPTPIQEKSIPLALAGRDVIGLAETGSGKTAAFALPVL 120
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALLE FA V++PTRELA QI++ FEALGS I+LRCAV+VGG+DM+QQ +
Sbjct: 121 QALLEKPSG------LFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQAI 174
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PH+VVATPGRL+DHL TKGFSL +LKYLVLDEADRLL+ DF S+D+IL IPR
Sbjct: 175 ALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKILKFIPR 234
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK-YSTVDTLKQQYRFVPAKYKDCYLVY 246
R TYLFSATM+ KV+ LQRA LK+P ++ S Y V TL Q + F+P KD Y V+
Sbjct: 235 ERHTYLFSATMSSKVESLQRASLKDPARVSVQSNGYQVVSTLLQNFLFIPHALKDVYCVH 294
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ +T+VF RT T+ LA++LR LG A+P+ G +SQS RLGALNKF+AG +I
Sbjct: 295 LINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALPLHGQLSQSARLGALNKFRAGSRDI 354
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIP+VD+VINYD+P +SK YIHRVGRTARAG++G A+SLV QY+LE +L
Sbjct: 355 LVATDVAARGLDIPNVDVVINYDLPQDSKTYIHRVGRTARAGKSGRALSLVTQYDLEIWL 414
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+IE +GKKL EFP E+EEV++ RV EA+R +++ +K R +KG
Sbjct: 415 RIEASMGKKLDEFPTEKEEVMVFQARVEEAQRHARIEMKHLMENRGKKGA 464
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/393 (59%), Positives = 300/393 (76%), Gaps = 4/393 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E TF +LGL + L EAC + + P++IQ +IP AL+GKD+IGLA+TGSGKT AFALP
Sbjct: 79 ENATFADLGLAEVLCEACATLKFTKPTEIQRRSIPLALQGKDVIGLAETGSGKTAAFALP 138
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L LL + FFA VL+PTRELA QI + F ALGS I L+ AVLVGG+DM Q
Sbjct: 139 VLHDLLATKGKKE----FFALVLAPTRELAFQIRQTFNALGSPIGLKSAVLVGGIDMTTQ 194
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+AL K+PH+++ATPGRL+DHL NTKGF L L+YL++DEADR+LN D+EK LD+IL VI
Sbjct: 195 AIALAKKPHVLIATPGRLVDHLENTKGFHLKALRYLIMDEADRMLNMDYEKELDKILAVI 254
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
PR R+T+LFSATMT KV KLQRA L++PVK+E SKY TVDTL Q+Y FVP K+KDCYL+
Sbjct: 255 PRERRTFLFSATMTSKVGKLQRASLRDPVKVEVNSKYKTVDTLIQRYMFVPQKFKDCYLI 314
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y++ ++ +S ++F TC+ L+LR+LG A+ + G MSQ KRLGAL KF +
Sbjct: 315 YLMNQLRGNSFIIFCSTCNNVMKATLVLRDLGFDAVCLHGQMSQPKRLGALAKFTSQSHT 374
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVASRGLDIP VD+V+NYDIPT+SKDYIHRVGRTARAGR+G AI++ QY++E +
Sbjct: 375 ILVATDVASRGLDIPHVDVVVNYDIPTHSKDYIHRVGRTARAGRSGHAITIATQYDVELF 434
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
+IE LIGKK+ E+P E +VL LLERV++A+R
Sbjct: 435 QRIEALIGKKMEEYPTESSQVLQLLERVSDAQR 467
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/412 (59%), Positives = 312/412 (75%), Gaps = 8/412 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKELG+ L+EA E + +K P+ IQAEA+PHA+ G+D+IG+A+TGSGKT AFALPILQ
Sbjct: 17 FKELGVIGPLLEALEQMNFKKPTDIQAEALPHAISGRDIIGVAETGSGKTVAFALPILQR 76
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E + FACVL+PTRELA QIS+QFE+LGS I +RCAV+VGG++M+ Q +AL
Sbjct: 77 LWEEPK------GLFACVLAPTRELAYQISQQFESLGSAIGVRCAVIVGGMNMVDQAVAL 130
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHIVVATPGRL DHL NTKGFSL +K+LVLDEADRLL+ DF +D+IL VIP+ R
Sbjct: 131 AKRPHIVVATPGRLNDHLENTKGFSLRGIKFLVLDEADRLLDMDFGPIIDKILKVIPKER 190
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
TYLFSATMT KV KLQRA L NPV++E + KY+TV TL Q Y F+P K K+ L+++
Sbjct: 191 TTYLFSATMTTKVAKLQRASLTNPVRVEVSKKYTTVSTLLQYYLFIPYKQKEVNLIHMCN 250
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+S +S ++FTRT + LAL+L+ LG ++P+ G +SQS RLGAL KFK+G NIL+
Sbjct: 251 TLSQNSIIIFTRTVMDCQRLALILKTLGFSSVPLHGQLSQSARLGALAKFKSGGRNILVA 310
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+ASRGLDIPSVD VINYDIP++SKDYIHRVGRTARAGR G +I+LV QY++E +IE
Sbjct: 311 TDIASRGLDIPSVDAVINYDIPSHSKDYIHRVGRTARAGRAGNSITLVTQYDVELIQRIE 370
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR--RKGGDED 419
+IGKK+ +P + EE+ LL ERV EA R++ +K+ + R RK G ED
Sbjct: 371 AVIGKKMDLWPTDAEEIALLRERVDEAARMAAKELKEQAKEGRHGRKRGRED 422
>gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]
Length = 414
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/391 (60%), Positives = 306/391 (78%), Gaps = 8/391 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E +V+TF+ LG+ L EAC +GW P+ IQ +AIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 30 EDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFA 89
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LP+LQALL A+ QR FA VL+PTRELA QI E FEALG+ I L+ +VGGVDMM
Sbjct: 90 LPVLQALL--AKPQR----LFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMM 143
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL ++PH+VVATPGRL+DHL NTKGF + ++LVLDEADR+L+ DFE+ +++IL
Sbjct: 144 TQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILA 203
Query: 184 VIP--RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
++P + R+T LFSATMT KV KLQRA L +PVK+EA+ K++T TL QQY F+PAKYKD
Sbjct: 204 IMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKD 263
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
CYL Y L E + + +VF TC+ + LAL+LRNLG AI + G M+Q KRLGAL+KFK+
Sbjct: 264 CYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKS 323
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +ILI TDVASRGLDIP+VD+VIN+DIP++ KDYIHRVGRTARAGR G +I++V QY+
Sbjct: 324 GQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYD 383
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 392
+E Y ++E L+G KLPE+ +EE VL+LLER
Sbjct: 384 VEVYQRLEALLGTKLPEYKTDEETVLILLER 414
>gi|169609619|ref|XP_001798228.1| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
gi|143462316|sp|Q0UK12.2|RRP3_PHANO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|160701880|gb|EAT84178.2| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
Length = 546
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/407 (57%), Positives = 316/407 (77%), Gaps = 8/407 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+R+EL +ACEN+G+KT + IQ E+IP AL GKD+IGLA+TGSGKT AF LPIL
Sbjct: 115 KTFADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLPIL 174
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + A+F +++PTRELA QIS+Q +ALGS I+++CA LVGG+DM+ Q +
Sbjct: 175 QALLDKPQ------AYFGLIMAPTRELAYQISQQVDALGSIINVKCATLVGGMDMVPQAI 228
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPHI+VA+PGRL+DHL NTKGFSL LKYLVLDEADRLL+ DF SLD+I V+PR
Sbjct: 229 ALSKRPHIIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLDKIFKVLPR 288
Query: 188 M-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYLFSATM+ KV+ LQRA LKNPV++ ++S + V TL Q Y +P KYKD YL+
Sbjct: 289 DDRHTYLFSATMSSKVESLQRAALKNPVRVSISSSSHQVVSTLLQSYMLIPHKYKDLYLI 348
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + +T++FTRT + T+ LA++LR LG +A+P+ G +SQS RLGALNKFKA +
Sbjct: 349 HLLNDNIGHATILFTRTVNETQRLAVLLRTLGFQALPLHGQLSQSNRLGALNKFKAKARD 408
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIPSVD+V+N+D+P +S+ Y+HRVGRTARAG++G A+S V QY+LE +
Sbjct: 409 ILVATDVAARGLDIPSVDLVVNFDLPHDSETYVHRVGRTARAGKSGKAVSFVTQYDLEIF 468
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
+IE +GK++PE +EV++ ERV EA+R++ +KD ++R+
Sbjct: 469 QRIEHALGKQVPEEKVSRDEVMVYAERVGEAQRVAVREMKDLHDQRK 515
>gi|301765214|ref|XP_002918023.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Ailuropoda melanoleuca]
Length = 406
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/441 (56%), Positives = 314/441 (71%), Gaps = 61/441 (13%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 QEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFK-- 250
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
SKRLG+LNKFKA
Sbjct: 251 -----------------------------------------------SKRLGSLNKFKAK 263
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
E + +IE LIGKKLP FP +E+EV++L ERVTEA+R ++M +++ G K++R D ++D
Sbjct: 324 ELFQRIEHLIGKKLPVFPTQEDEVMMLTERVTEAQRFARMELREHGEKKKRTREDAGDND 383
Query: 421 DIGRQFGINKK----KLSKRK 437
D+ G+ K K+ KRK
Sbjct: 384 DMEGAMGVRNKVAGGKMKKRK 404
>gi|426225488|ref|XP_004006898.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Ovis aries]
Length = 408
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/442 (56%), Positives = 313/442 (70%), Gaps = 63/442 (14%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 21 EVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 80
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 81 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDS 134
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 135 MSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 194
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 195 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFK-- 252
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
SKRLG+LNKFKA
Sbjct: 253 -----------------------------------------------SKRLGSLNKFKAK 265
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 266 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 325
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 326 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDTGDND 385
Query: 420 DDIGRQFGINKK----KLSKRK 437
D G G+ K K+ KRK
Sbjct: 386 DTEG-AIGVRNKVAGGKMKKRK 406
>gi|320583325|gb|EFW97540.1| ATP-dependent rRNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 470
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/413 (57%), Positives = 310/413 (75%), Gaps = 6/413 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K+V FKELGL+ ++++A E + + TP+ IQA+++PH+L+G+D+IG+AQTGSGKT AFA+
Sbjct: 64 KQVTLFKELGLQPDILDAIEKLNFSTPTPIQAQSLPHSLQGRDIIGIAQTGSGKTAAFAI 123
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQAL E +FACVL+PTRELA QI E F+ALG + LRC+ +VGG+DMM+
Sbjct: 124 PILQALWEAQT------PYFACVLAPTRELAYQIRETFDALGVNMGLRCSTIVGGMDMME 177
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L ++PH++VATPGRLMDHL NTKGFSL LKYLV+DEADRLL+ +F LD ILN+
Sbjct: 178 QAKELMRKPHVIVATPGRLMDHLENTKGFSLKALKYLVMDEADRLLDMEFGPVLDRILNI 237
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IPR R+TYLFSAT+T KV+KLQRA L +PVKI KYSTVDTL Q VP YK+ YL
Sbjct: 238 IPRERKTYLFSATLTSKVEKLQRASLIDPVKIAVNDKYSTVDTLIQTLMVVPDGYKNTYL 297
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+Y+L E S +VF RTC + +AL+ R LG AIP+ G ++Q++RLGALNKFK+G+
Sbjct: 298 IYLLNEYVGKSVIVFARTCAHAQKVALLARILGFSAIPLHGQLTQAQRLGALNKFKSGDK 357
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
IL+ TDVA+RGLDIPSVD+V+NYDIPT+SK YIHRVGRTARAGR+G ++SLV QY+LE
Sbjct: 358 QILVATDVAARGLDIPSVDLVVNYDIPTDSKAYIHRVGRTARAGRSGKSVSLVTQYDLEL 417
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD 417
L+IEK+I KLP+ + E+L L + V A + +K+ +KR+ + D
Sbjct: 418 ILRIEKVIDMKLPKEVPNKNEILALHDSVDRATAQAVSKVKEFHSKRKFRKKD 470
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/409 (58%), Positives = 314/409 (76%), Gaps = 7/409 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LG+ D L EACE++ +K P+ IQ ++IP AL+ +D+IGLA+TGSGKT AFALPIL
Sbjct: 57 KTFKQLGIVDSLCEACESLNYKFPTPIQEKSIPVALQNRDIIGLAETGSGKTAAFALPIL 116
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + F VL+PTRELA QI + FEALGS ISLRCAV+VGG+DM+ Q +
Sbjct: 117 QALLDKPQ------PLFGLVLAPTRELAHQIGQSFEALGSSISLRCAVIVGGLDMVPQAV 170
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL TKGFSL TLKYLV+DEADRLL+ DF ++D++L IPR
Sbjct: 171 ALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPAIDKLLKFIPR 230
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSAT++ KV+ LQRA L++PV++ +S KY TV TL Q +P KD YL+Y
Sbjct: 231 ERRTYLFSATLSSKVESLQRASLRDPVRVSVSSNKYQTVSTLLQNLLVIPQMRKDTYLIY 290
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ E + ST++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF++G +I
Sbjct: 291 LVNEFTGKSTIIFTRTVWETQRIAILLRTLGFGAIPLHGQLSQSARLGALNKFRSGTRDI 350
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI VD+V+NYD+P +SK YIHRVGRTARAG++G+AISLV QY++E +
Sbjct: 351 LVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRTARAGKSGIAISLVTQYDIEVFQ 410
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +GKKL +P E+EEVL RV EA+R +++ +K+ KR KG
Sbjct: 411 RIEAALGKKLDIYPTEKEEVLAFQHRVEEAQRHARIEMKNLSEKRHGKG 459
>gi|149713748|ref|XP_001501504.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Equus caballus]
Length = 406
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 313/441 (70%), Gaps = 61/441 (13%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFK-- 250
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
SKRLG+LNKFKA
Sbjct: 251 -----------------------------------------------SKRLGSLNKFKAK 263
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R D ++D
Sbjct: 324 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDVGDND 383
Query: 421 DIGRQFGINKK----KLSKRK 437
D G+ K K+ KRK
Sbjct: 384 DTEGALGVRNKVAGGKMKKRK 404
>gi|426371743|ref|XP_004052801.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Gorilla gorilla gorilla]
Length = 406
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/444 (56%), Positives = 313/444 (70%), Gaps = 63/444 (14%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
SKRLG+LNKFK
Sbjct: 251 -------------------------------------------------SKRLGSLNKFK 261
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 262 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 321
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 322 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 381
Query: 418 EDDDIGRQFGINKK----KLSKRK 437
DD G G+ K K+ KRK
Sbjct: 382 NDDTEG-AIGVRNKVAGGKMKKRK 404
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/400 (59%), Positives = 313/400 (78%), Gaps = 7/400 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LGL +L EACE +G+K P+ IQAE+IP AL+ +DLIGLA+TGSGKT AFALPIL
Sbjct: 45 KTFKDLGLIPQLCEACETLGYKAPTAIQAESIPLALQNRDLIGLAETGSGKTAAFALPIL 104
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL++ + FF VL+PTRELA QISE FEALGS IS+R VLVGG+DM+ Q +
Sbjct: 105 QALMDKPQ------PFFGLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAI 158
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
A+GKRPHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF +D+IL V+PR
Sbjct: 159 AIGKRPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKVLPR 218
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P K+KD +L++
Sbjct: 219 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQYYMFIPHKHKDVHLIW 278
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E +T++FTRT T LAL+ R LG AI + G +SQS RL +++KF++ +I
Sbjct: 279 LLNEHIGQTTIIFTRTIHETNRLALLTRFLGFSAIALHGQLSQSSRLASISKFRSKTRSI 338
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVA+RGLDIPSVD+V+NYD+ +SK ++HR+GRTARAG++G AISLV QY++E +L
Sbjct: 339 LIATDVAARGLDIPSVDLVLNYDLAADSKTHVHRIGRTARAGKSGKAISLVTQYDVEVWL 398
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+IEK + KKLPE+ E++EVL+L +RV+EA+R + +KD
Sbjct: 399 RIEKALDKKLPEYKVEKDEVLILSDRVSEAQRQAITELKD 438
>gi|226288804|gb|EEH44316.1| ATP-dependent rRNA helicase RRP3 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/415 (60%), Positives = 321/415 (77%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+FK+LG+ D L EACE +G+KTP+ IQ EAIP AL+G+DLIGLA+TGSGKT AF
Sbjct: 51 EETATKSFKDLGVIDSLCEACEALGYKTPTPIQTEAIPLALQGRDLIGLAETGSGKTAAF 110
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL++ ++ F VL+PTRELA QISE FEALGS IS+RCAV+VGG+DM
Sbjct: 111 ALPILQALMDKPQS------LFGLVLAPTRELAYQISEAFEALGSLISVRCAVIVGGMDM 164
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL
Sbjct: 165 VPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKIL 224
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
V+PR R+TYLFSATM+ KV+ LQRA L NP+++ ++SKY TV TL Q + F+P KYKD
Sbjct: 225 KVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVSTLLQTFLFIPHKYKD 284
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + S ++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL KF++
Sbjct: 285 IYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSYRLGALGKFRS 344
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGRTARAG++G A S V QY+
Sbjct: 345 RSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRTARAGKSGHAFSFVTQYD 404
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
LE +L+IE + KKL E+ E+EEV++L +RV EA+R + +K+ R KG
Sbjct: 405 LEVWLRIENALDKKLEEYKVEKEEVMVLSDRVGEAQRHAITEMKNLHENRGTKGA 459
>gi|41327776|ref|NP_957518.1| probable ATP-dependent RNA helicase DDX47 isoform 2 [Homo sapiens]
gi|119616689|gb|EAW96283.1| hCG27698, isoform CRA_c [Homo sapiens]
Length = 406
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/444 (56%), Positives = 313/444 (70%), Gaps = 63/444 (14%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
SKRLG+LNKFK
Sbjct: 251 -------------------------------------------------SKRLGSLNKFK 261
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 262 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 321
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 322 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 381
Query: 418 EDDDIGRQFGINKK----KLSKRK 437
DD G G+ K K+ KRK
Sbjct: 382 NDDTEG-AIGVRNKVAGGKMKKRK 404
>gi|73997169|ref|XP_866840.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Canis lupus familiaris]
Length = 407
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/424 (57%), Positives = 305/424 (71%), Gaps = 58/424 (13%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 QEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFK-- 250
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
SKRLG+LNKFKA
Sbjct: 251 -----------------------------------------------SKRLGSLNKFKAK 263
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 324 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDAGDND 383
Query: 420 DDIG 423
D G
Sbjct: 384 DTEG 387
>gi|402885240|ref|XP_003906072.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Papio anubis]
Length = 406
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/442 (56%), Positives = 312/442 (70%), Gaps = 63/442 (14%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK-- 250
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
SKRLG+LNKFKA
Sbjct: 251 -----------------------------------------------SKRLGSLNKFKAK 263
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD D
Sbjct: 324 ELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMELREHGEKKKRSREDAGDND 383
Query: 420 DDIGRQFGINKK----KLSKRK 437
D G G+ K K+ KRK
Sbjct: 384 DTEG-AIGVRNKVAGGKMKKRK 404
>gi|410963866|ref|XP_003988480.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Felis catus]
Length = 406
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/442 (56%), Positives = 313/442 (70%), Gaps = 63/442 (14%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 QEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYVFIPSKFK-- 250
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
SKRLG+LNKFKA
Sbjct: 251 -----------------------------------------------SKRLGSLNKFKAK 263
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDED 419
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD D
Sbjct: 324 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRVREDTGDND 383
Query: 420 DDIGRQFGINKK----KLSKRK 437
D G G+ K K+ KRK
Sbjct: 384 DTEG-AMGVRNKVAGGKMKKRK 404
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/424 (57%), Positives = 316/424 (74%), Gaps = 21/424 (4%)
Query: 28 WKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACV 87
+K P++IQAE +PHAL+G+D+IG+A TGSGKT AFALPILQ L E + FACV
Sbjct: 3 YKAPTEIQAEVLPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEPKG------LFACV 56
Query: 88 LSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL 147
L+PTRELA+QI++QFE++GS + +RCA ++GGVD+M Q +AL K+PHIVVATPGRL DHL
Sbjct: 57 LAPTRELAVQIAQQFESIGSAMGVRCATIIGGVDIMAQKVALAKKPHIVVATPGRLNDHL 116
Query: 148 TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQR 207
TKGFSL +L++LVLDEADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQR
Sbjct: 117 EETKGFSLRSLQFLVLDEADRLLDMDFGPIIDKILKVIPKERTTYLFSATMTTKVAKLQR 176
Query: 208 ACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR 267
A L NPV+IE SKYSTV TL Q Y +P KD +L+Y+ ++ +S ++FTRT +
Sbjct: 177 ASLSNPVRIEVNSKYSTVSTLLQYYLLIPLPQKDVHLIYLANTLAQNSIIIFTRTVHDAQ 236
Query: 268 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 327
L+++LR LG AIP+ G +SQS RLGAL KFK+G +L+ TDVASRGLDIPSVD+VIN
Sbjct: 237 RLSIILRTLGFPAIPLHGQLSQSARLGALGKFKSGGRKVLVATDVASRGLDIPSVDVVIN 296
Query: 328 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 387
YDIPT+SKDYIHRVGRTARAGR+G +++LV QY++E L+IE++IGKK+ +P ++EEV
Sbjct: 297 YDIPTHSKDYIHRVGRTARAGRSGKSVTLVTQYDVELVLRIEQVIGKKMELWPVDKEEVA 356
Query: 388 LLLERVTEAKRISQMTIKD----SGNKRRRKGG--------DEDDDI---GRQFGINKKK 432
LL ERV EA R++ +++ G+K+R++GG D DDD+ G K K
Sbjct: 357 LLRERVDEAGRLATSEMREQGIRGGHKKRKRGGEDGGKGDMDRDDDVHEAGMPMHKKKGK 416
Query: 433 LSKR 436
S+R
Sbjct: 417 SSRR 420
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/398 (59%), Positives = 305/398 (76%), Gaps = 6/398 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL + L+EA + + +K P+ IQ EA+PHALEG+D+IG+A TGSGKT AFALPILQ
Sbjct: 15 TFKSLGLINPLLEALDQLKYKEPTDIQREALPHALEGRDIIGVASTGSGKTAAFALPILQ 74
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FACVL+PTRELA QIS+QFEALGS + +RCAVLVGG+D++ Q +A
Sbjct: 75 KLWEEPRG------LFACVLAPTRELAYQISQQFEALGSAMGVRCAVLVGGMDLIDQAVA 128
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VATPGRL HLT TKGFSL LK+LVLDEADRLL+ DF +D+IL +IP+
Sbjct: 129 LAKKPHIIVATPGRLQQHLTETKGFSLRGLKFLVLDEADRLLDLDFGPVIDQILKIIPKE 188
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NP+++E +SKY TV TL Q Y F+P KD +L+Y+
Sbjct: 189 RTTYLFSATMTTKVAKLQRASLSNPIRVEVSSKYQTVSTLLQYYLFIPLSQKDVHLIYLA 248
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++++S ++FTRT + L++MLR LG A+P+ G +SQS RLGAL KFK+G +L+
Sbjct: 249 NSLASNSIIIFTRTVHDAQRLSIMLRILGFPAVPLHGQLSQSARLGALAKFKSGGRKVLV 308
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIPSVD+VIN+DIP +SKDYIHRVGRTARAGR+G +I+LV QY++E +I
Sbjct: 309 ATDVASRGLDIPSVDIVINFDIPNHSKDYIHRVGRTARAGRSGKSITLVTQYDVELIQRI 368
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E++I KK+ +P ++EE+ LL ERV EA R++ +K+
Sbjct: 369 EEVIEKKMELWPTDKEEIALLRERVNEAGRLAINEMKE 406
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 316/425 (74%), Gaps = 16/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF+ELG+ D L EACE +G+ P+ IQ IP ALEG+DLIGLA+TGSGKT AF LP+L
Sbjct: 28 KTFRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPML 87
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL++ + F + +L+PTRELA QI+ EALG+ IS+RC +L+GG+DM+ Q +
Sbjct: 88 QALMDKPQQ------FHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQAI 141
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PH++VATPGRL+DHL NTKGFSL TLKYLVLDEADRLL+ DF LD++L ++P+
Sbjct: 142 ALGKKPHVIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRLLPK 201
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+TYLFSATM+ KV+ LQRA L +PV++ ++K T L Q Y F+P K+KD YLVY+
Sbjct: 202 -RKTYLFSATMSSKVESLQRASLSDPVRVSVSTKNQTASKLLQSYLFIPHKFKDFYLVYL 260
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + ++FTRT T+ L++MLRNLG AIPI G +SQS RL +LNKF+A N+L
Sbjct: 261 LNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPIHGQLSQSARLASLNKFRARSRNLL 320
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TDVA+RGLDIP+VD V+NYD+P +SK YIHRVGRTARAG++G+A S V QYE+E +L+
Sbjct: 321 IATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVELWLR 380
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK---------RRRKGGDE 418
IE +GKK+ E+ E++EV++ ERV +A+R++ +T++D +K R+R D
Sbjct: 381 IEDALGKKVEEYKPEKDEVMIFAERVNDAQRVAALTMRDMQDKDNKGRGPRNRKRTRDDL 440
Query: 419 DDDIG 423
D D G
Sbjct: 441 DQDDG 445
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/399 (58%), Positives = 311/399 (77%), Gaps = 7/399 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+ + L EACE +G+K P+ IQ +AIP AL+ +DLIG+A+TGSGKT AFALPIL
Sbjct: 70 KTFADLGIVESLCEACERLGYKRPTPIQEQAIPLALQNRDLIGIAETGSGKTAAFALPIL 129
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + FA VL+PTRELA QI++ FEALGS ISLRCA+++GG+DM+QQ +
Sbjct: 130 QALLDKPQ------PLFALVLAPTRELAAQIAQAFEALGSMISLRCALILGGLDMVQQAI 183
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PH++VATPGRL+DHL TKGFSL LKYLV+DEADRLL+ DF L++IL +PR
Sbjct: 184 ALGKKPHVIVATPGRLLDHLEKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKILKFLPR 243
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L++P+K+ + SKY TV TL Q Y F+P +KD YL+Y
Sbjct: 244 ERRTFLFSATMSSKVESLQRASLRDPLKVSISTSKYQTVSTLVQHYIFIPHIHKDTYLIY 303
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF+AG NI
Sbjct: 304 LVNEFAGKTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRAGSRNI 363
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIP+VD V+N+D+P +SK Y+HRVGRTARAG++G AIS V QY+LE +L
Sbjct: 364 LVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRTARAGKSGHAISFVTQYDLEIWL 423
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 405
+ E +G KL E+P E++EV++ RV EA+RI++ +K
Sbjct: 424 RTEAALGYKLTEYPLEKDEVMVFKPRVEEAQRIAKNEMK 462
>gi|402218296|gb|EJT98373.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 476
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/428 (60%), Positives = 307/428 (71%), Gaps = 22/428 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL + LV+AC+ + +K P+ IQA AIP ALEGKD+IGLA+TGSGKT AFALPILQ
Sbjct: 40 TFSSLGLIEPLVDACKQLNFKRPTPIQAAAIPPALEGKDIIGLAETGSGKTAAFALPILQ 99
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + FF VL+PTRELA QIS+QFEALGS I +RCAVL+GGV M+ Q +A
Sbjct: 100 KLWHDPK------PFFCVVLAPTRELAYQISQQFEALGSTIGVRCAVLIGGVKMVPQAVA 153
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVVATPGRL DHL NTKGFSL LKYLV+DEADRLL+ DF +D +L IPR
Sbjct: 154 LSKRPHIVVATPGRLQDHLENTKGFSLRGLKYLVMDEADRLLDLDFGPIIDTLLKAIPRQ 213
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R T LFSATMT KV KLQR L+NPVK+E +SKY TV TL Q Y PA K+ LV++L
Sbjct: 214 RNTMLFSATMTTKVAKLQRTSLRNPVKVEVSSKYQTVSTLLQTYVLTPAAVKEPQLVHLL 273
Query: 249 TEVSASSTMVFTRTC-DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
T VS ST+VF RT DAT+L L LRNLG AIP+ G +SQ KRLGA+++FKA IL
Sbjct: 274 TTVSGLSTIVFVRTIHDATKL-TLALRNLGFPAIPLHGDISQDKRLGAISRFKAEPGAIL 332
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLD+P VD VINYD+PTNSKDYIHRVGRTARAGR G AIS+V QY++E +
Sbjct: 333 VATDVASRGLDMPKVDAVINYDLPTNSKDYIHRVGRTARAGRAGKAISIVTQYDVELLQR 392
Query: 368 IEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQMTIKDS---------GNKRRRKGG- 416
IE +IGKKL + EEV +L ERV EA R + + +K+ G KR+R+G
Sbjct: 393 IEHVIGKKLEAYGETTREEVEMLRERVGEAVRAATIQMKEQEGKRTQGGRGRKRQREGKR 452
Query: 417 ---DEDDD 421
D DDD
Sbjct: 453 EQLDRDDD 460
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/419 (56%), Positives = 322/419 (76%), Gaps = 11/419 (2%)
Query: 3 EEKEV----KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGK 58
E++EV KTFK+LG+ D L EACE +G+K P+ IQ ++IP AL+ +D+IG+A+TGSGK
Sbjct: 81 EQEEVETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGK 140
Query: 59 TGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
T AFALPILQALL+ + P FA VL+PTRELA QI++ FEALGS ISLRCA+++G
Sbjct: 141 TAAFALPILQALLD-----KPAP-LFALVLAPTRELAAQIAQAFEALGSLISLRCALILG 194
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
G+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +++YLV+DEADRLL+ DF L
Sbjct: 195 GMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPIL 254
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPA 237
++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ +S KY+TV TLK Y F+P
Sbjct: 255 EKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVSTLKSNYVFIPH 314
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
+KD YLVY+ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALN
Sbjct: 315 MHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALN 374
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
KF+AG IL+ TDVA+RGLDIP+VD VIN+D+P +SK Y+HRVGRTARAG++G AIS+V
Sbjct: 375 KFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIV 434
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
QY+LE +L+IE +G KL E+P E++EV++ RV EA+R ++ +K + + GG
Sbjct: 435 TQYDLEIWLRIEAALGHKLDEYPLEKDEVMVFKPRVEEAQRHARNEMKSLMENQGKHGG 493
>gi|402083740|gb|EJT78758.1| ATP-dependent rRNA helicase RRP3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 485
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/418 (56%), Positives = 317/418 (75%), Gaps = 9/418 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A E KTFK+LG+ D L EACE +G+K P+ IQ +AIP AL+G+D+IG+A+TGSGKT A
Sbjct: 51 AAEVPAKTFKDLGIVDPLCEACEALGYKQPTPIQTQAIPLALQGRDVIGIAETGSGKTAA 110
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ+LL+ + F VL+PTRELA QI + FEALGS ISLRCAV+VGG+D
Sbjct: 111 FALPILQSLLDKPQ------PLFGLVLAPTRELAAQIGQAFEALGSLISLRCAVVVGGLD 164
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q++ALGK+PH+VVATPGRL+DHL TKGFSL +LKYLV+DEADRLL+ DF LD+I
Sbjct: 165 MVSQSIALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVMDEADRLLDLDFGPILDKI 224
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS-TVDTLKQQYRFVPAKYK 240
L +PR R+TYLFSATM+ KV+ LQRA L++P+++ +SK TV TL Q +P +K
Sbjct: 225 LKFLPRERRTYLFSATMSSKVESLQRASLRDPLRVSVSSKREKTVATLLQNPLIIPHMHK 284
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YL+Y++ E + +T++FTRT + + L+++LR L AIP+ G +SQS RLGALNKFK
Sbjct: 285 DVYLIYLVNEFAGQTTIIFTRTVNEAQRLSILLRTLSFGAIPLHGQLSQSMRLGALNKFK 344
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVA+RGLDIP VD+VINYD+P +S YIHRVGRTARAGR+G AIS+V QY
Sbjct: 345 AKSRDILVATDVAARGLDIPEVDLVINYDLPGDSMTYIHRVGRTARAGRSGRAISIVTQY 404
Query: 361 ELEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
++E +++IEK L G+KLP + + EEV++ ERV EA+R+++ +K+ R +KG
Sbjct: 405 DVELWMRIEKAALDGRKLPTYQPDREEVMVFKERVEEAQRVARNEMKELHEDRGKKGA 462
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/419 (56%), Positives = 322/419 (76%), Gaps = 11/419 (2%)
Query: 3 EEKEV----KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGK 58
E++EV KTFK+LG+ D L EACE +G+K P+ IQ ++IP AL+ +D+IG+A+TGSGK
Sbjct: 81 EQEEVETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGK 140
Query: 59 TGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
T AFALPILQALL+ + P FA VL+PTRELA QI++ FEALGS ISLRCA+++G
Sbjct: 141 TAAFALPILQALLD-----KPAP-LFALVLAPTRELAAQIAQAFEALGSLISLRCALILG 194
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
G+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +++YLV+DEADRLL+ DF L
Sbjct: 195 GMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPIL 254
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPA 237
++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ +S KY+TV TLK Y F+P
Sbjct: 255 EKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVSTLKSNYVFIPH 314
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
+KD YLVY+ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALN
Sbjct: 315 MHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALN 374
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
KF+AG IL+ TDVA+RGLDIP+VD VIN+D+P +SK Y+HRVGRTARAG++G AIS+V
Sbjct: 375 KFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIV 434
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
QY+LE +L+IE +G KL E+P E++EV++ RV EA+R ++ +K + + GG
Sbjct: 435 TQYDLEIWLRIEAALGHKLDEYPLEKDEVMVFKPRVEEAQRHARNEMKSLMENQGKHGG 493
>gi|291392612|ref|XP_002712706.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
[Oryctolagus cuniculus]
Length = 406
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/436 (56%), Positives = 308/436 (70%), Gaps = 61/436 (13%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
ALLE + FA VL+PTRELA QISEQFEALGS I + CAV+VGG+D M Q+L
Sbjct: 84 NALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSL 137
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR
Sbjct: 138 ALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK------- 250
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
SKRLG+LNKFKA +IL
Sbjct: 251 ------------------------------------------SKRLGSLNKFKAKARSIL 268
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E + +
Sbjct: 269 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 328
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDDDIGRQ 425
IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R D ++DD
Sbjct: 329 IEHLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRAREDVGDNDDTEGA 388
Query: 426 FGINKK----KLSKRK 437
G+ K K+ KRK
Sbjct: 389 MGVRNKVAGGKMKKRK 404
>gi|109095726|ref|XP_001086008.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Macaca mulatta]
Length = 406
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/442 (56%), Positives = 311/442 (70%), Gaps = 63/442 (14%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KI EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKILIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK-- 250
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
SKRLG+LNKFKA
Sbjct: 251 -----------------------------------------------SKRLGSLNKFKAK 263
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 264 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 323
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD D
Sbjct: 324 ELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMELREHGEKKKRSREDAGDND 383
Query: 420 DDIGRQFGINKK----KLSKRK 437
D G G+ K K+ KRK
Sbjct: 384 DTEG-AIGVRNKVAGGKMKKRK 404
>gi|189205104|ref|XP_001938887.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985986|gb|EDU51474.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 517
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/401 (57%), Positives = 315/401 (78%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+R+EL +ACEN+ +K P+ IQ +AIP ALEG+D+IGLA+TGSGKT AF LPIL
Sbjct: 87 KTFADLGVREELCDACENLKFKNPTPIQTQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 146
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LLE + F +L+PTRELA QI++Q +ALGS I+++CA LVGG+DM+ Q +
Sbjct: 147 QSLLEKPQ------PLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAI 200
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPHIVVATPGRL+DHL NTKGFSL LKY+VLDEADRLL+ DF LD+IL V+PR
Sbjct: 201 ALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLPR 260
Query: 188 M-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYLFSATM+ KV+ LQRA L+NPV++ ++S + V TL Q+Y F+P KYKD YLV
Sbjct: 261 EGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRYAFIPHKYKDLYLV 320
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + T++FTRT + T+ +A++LR LG AIP+ G +SQS RLGALNKFK+ +
Sbjct: 321 HLLNDNIGHPTIIFTRTVNETQRIAVLLRALGFGAIPLHGQLSQSARLGALNKFKSKSRD 380
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIP+VD+++N+D+P++S+ Y+HRVGRTARAG++G A+S V QY+LE +
Sbjct: 381 ILVATDVAARGLDIPAVDLIVNFDLPSDSQTYVHRVGRTARAGKSGKAVSFVTQYDLEIW 440
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
L+IE +GKK+PE +++E ++ ++RV+EA+R++ +KD
Sbjct: 441 LRIEHALGKKIPEQTFDKDEAMVYMDRVSEAQRVAIREMKD 481
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/419 (57%), Positives = 306/419 (73%), Gaps = 7/419 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE +V++F EL L EL+E + + P+ IQAEAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 84 EESKVESFSELNLIPELLETINEMKFTKPTPIQAEAIPHALEGKDIIGLAQTGSGKTAAF 143
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PILQ+L + +F VL+PTRELA QI E F+ALGS + LR +VGG+DM
Sbjct: 144 AIPILQSLWDAQT------PYFGLVLAPTRELAYQIKETFDALGSSMGLRTVCIVGGMDM 197
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L +RPHI+VATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 198 MDQARDLMRRPHILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKIL 257
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP R TYLFSATMT KV+KLQRA L NPVK+ ++KY T D L Q V YK+
Sbjct: 258 KVIPTQRTTYLFSATMTSKVEKLQRASLHNPVKVAVSTKYQTADNLVQSMMLVSDGYKNT 317
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+++L E S +VFTRTC ++ +L+ R LG A+P+ G +SQS+RLG+LNKFK+G
Sbjct: 318 YLIHLLNEFVGKSIIVFTRTCAHSQRTSLLARILGFSAVPLHGQLSQSQRLGSLNKFKSG 377
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAG++G +ISLV QY+L
Sbjct: 378 KSNILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDL 437
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
E YL+IE ++GKKLP+ P+ + L L V +A + K+ +KRR++ D+ D
Sbjct: 438 ELYLRIENVLGKKLPKDPSPPRQALDALHVHVDKATAEAIRQTKEFHDKRRKRSRDDVD 496
>gi|406860112|gb|EKD13172.1| ATP-dependent rRNA helicase RRP3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 497
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/438 (55%), Positives = 324/438 (73%), Gaps = 20/438 (4%)
Query: 4 EKEVKT-FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ EV T FK+LG+ DEL +AC +G+K P+ IQAE+IP AL+ +DLI LA+TGSGKT AF
Sbjct: 66 QTEVPTSFKDLGIVDELCDACTALGYKAPTPIQAESIPLALQDRDLIALAETGSGKTAAF 125
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LL+ + FF VL+PTRELA QIS+ FEALGS I +RCAV+VGG+DM
Sbjct: 126 ALPILQSLLDKPQ------PFFGLVLAPTRELAYQISQSFEALGSKIGVRCAVIVGGMDM 179
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHI+VA+PGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF +D+IL
Sbjct: 180 VPQAIALGKKPHIIVASPGRLLDHLENTKGFSLRALKYLVMDEADRLLDLDFGAIIDKIL 239
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+TYLFSATM+ KV+ LQRA LK+P+++ ++KY TV TL Q VP +KD
Sbjct: 240 KVIPRERRTYLFSATMSSKVESLQRASLKDPLRVSVSTKYQTVSTLIQNCLIVPLVHKDV 299
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVY++ E + S ++FTRT + T+ LA++LR+LG AIP+ G +SQ+ RLGALNKF+AG
Sbjct: 300 YLVYLMNEFAGQSAIIFTRTVNETQRLAILLRSLGFGAIPLHGQLSQTARLGALNKFRAG 359
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
IL+ TDVA+RGLDIPSVD+V+NYD+P SK YIHRVGRTARAG++G A S+V QY++
Sbjct: 360 TRKILVATDVAARGLDIPSVDIVLNYDLPPESKTYIHRVGRTARAGKSGHAFSIVTQYDV 419
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK----DSGNK-------R 411
E + + E + ++P + +EEV++ RV EA+R ++ +K D GNK R
Sbjct: 420 EIFTRTEAALKIRMPVYEPVKEEVMVFKARVEEAQRHARNEMKNLHEDRGNKGSILKGRR 479
Query: 412 RRKGGDE--DDDIGRQFG 427
+ GG++ DD+ R+ G
Sbjct: 480 PKTGGNKRGRDDMDREEG 497
>gi|330923108|ref|XP_003300102.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
gi|311325897|gb|EFQ91780.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
Length = 516
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/401 (57%), Positives = 315/401 (78%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+R+EL +ACEN+ +K P+ IQ +AIP ALEG+D+IGLA+TGSGKT AF LPIL
Sbjct: 86 KTFADLGIREELCDACENLKFKNPTPIQTQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 145
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LLE + F +L+PTRELA QI++Q +ALGS I+++CA LVGG+DM+ Q +
Sbjct: 146 QSLLEKPQ------PLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAI 199
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPHIVVATPGRL+DHL NTKGFSL LKY+VLDEADRLL+ DF LD+IL V+PR
Sbjct: 200 ALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLPR 259
Query: 188 M-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYLFSATM+ KV+ LQRA L+NPV++ ++S + V TL Q+Y F+P KYKD YL+
Sbjct: 260 EGRHTYLFSATMSSKVENLQRAALQNPVRVSISSSSHQVVSTLLQRYAFIPHKYKDLYLI 319
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + T++FTRT + T+ +A++LR LG AIP+ G +SQS RLGALNKFK+ +
Sbjct: 320 HLLNDNIGHPTIIFTRTVNETQRIAVLLRALGFGAIPLHGQLSQSARLGALNKFKSKSRD 379
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIP+VD+++N+D+P++S+ Y+HRVGRTARAG++G A+S V QY+LE +
Sbjct: 380 ILVATDVAARGLDIPAVDLIVNFDLPSDSQTYVHRVGRTARAGKSGKAVSFVTQYDLEIW 439
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
L+IE +GKK+PE +++E ++ ++RV+EA+R++ +KD
Sbjct: 440 LRIEHALGKKIPEQTFDKDEAMVYMDRVSEAQRVAIREMKD 480
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/409 (56%), Positives = 319/409 (77%), Gaps = 7/409 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F++LG+ D L +AC+ +G+K P+ IQ ++IP AL+G+D+IG+A+TGSGKT AFALPIL
Sbjct: 62 KSFRDLGIVDSLCDACDRLGYKRPTPIQEQSIPLALQGRDIIGIAETGSGKTAAFALPIL 121
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + FA VL+PTRELA QI++ FEALGS ISLRCA+++GG+DM+QQ +
Sbjct: 122 QALLDKPQ------PLFALVLAPTRELAAQITQAFEALGSLISLRCALILGGLDMVQQAI 175
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PH+VVATPGRL+DHL TKGFSL LKYLV+DEADRLL+ DF L++IL +PR
Sbjct: 176 ALGKKPHVVVATPGRLLDHLEKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKILKFLPR 235
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L++P+K+ ++SKY TV TL Q Y F+P +KD YL+Y
Sbjct: 236 ERRTFLFSATMSSKVESLQRASLRDPLKVSISSSKYQTVATLVQNYLFIPHMHKDTYLIY 295
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF+AG NI
Sbjct: 296 LCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRAGSRNI 355
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIP+VD V+N+D+P +SK Y+HRVGRTARAG++G AIS+V QY++E +L
Sbjct: 356 LVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRTARAGKSGHAISIVTQYDIEIWL 415
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +G KL E+ E++EV++ RV EA+R ++ +K ++R +KG
Sbjct: 416 RIEAALGTKLTEYALEKDEVMVFKPRVEEAQRHAKNEMKQLIDERGKKG 464
>gi|296210932|ref|XP_002752173.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Callithrix jacchus]
Length = 406
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/436 (56%), Positives = 309/436 (70%), Gaps = 61/436 (13%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D M Q+L
Sbjct: 84 NALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK------- 250
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
SKRLG+LNKFKA +IL
Sbjct: 251 ------------------------------------------SKRLGSLNKFKAKARSIL 268
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++E + +
Sbjct: 269 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 328
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDDDIGRQ 425
IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R D ++DD
Sbjct: 329 IEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDARDNDDTEGA 388
Query: 426 FGINKK----KLSKRK 437
G+ K K+ KRK
Sbjct: 389 IGVRNKVAGGKMKKRK 404
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/399 (59%), Positives = 306/399 (76%), Gaps = 8/399 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LGL L+E+ E + +K P++IQ EA+PHALEG+D+IG+A TGSGKT AF LPILQ
Sbjct: 18 TFESLGLIKPLLESLEQLNFKIPTEIQVEALPHALEGRDIIGVAATGSGKTAAFGLPILQ 77
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + FACVL+PTRELA QIS+Q E+LGS + RCAV+VGG+DM Q +A
Sbjct: 78 KLWEEPKG------LFACVLAPTRELAYQISQQLESLGSAMGARCAVIVGGMDMPAQAIA 131
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVVATPGRLMDHL TKGF+L +K+LVLDEADRLL+ DF +D+IL +IP+
Sbjct: 132 LAKRPHIVVATPGRLMDHLEKTKGFNLRNIKFLVLDEADRLLDLDFGTIIDKILKLIPKE 191
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NPV++E ++KY TV TL Q Y +P K KD YLVY+
Sbjct: 192 RTTYLFSATMTTKVAKLQRASLSNPVRVEVSTKYQTVSTLLQYYLLMPLKDKDAYLVYLA 251
Query: 249 TEVSASSTMVFTRTC-DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
++ +S ++FTRT DA+R L+++LR LG A+P+ G +SQS+RLGAL +FK+G +L
Sbjct: 252 NTLAQNSIIIFTRTVHDASR-LSIILRTLGFPAVPLHGQLSQSQRLGALGQFKSGGRRVL 310
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRTARAGR G +I+LV QY++E +
Sbjct: 311 VATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGRTARAGRAGKSITLVTQYDVELVQR 370
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
IE++IGKK+ +P +++E+ LL ER EA R++ ++D
Sbjct: 371 IEQVIGKKMELWPTDDQEIALLRERADEAGRVAAAELRD 409
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/422 (55%), Positives = 319/422 (75%), Gaps = 7/422 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
VKTF++LG+ D L +ACE +G+K P+ IQ EAIP AL+ +D+IG+A+TGSGKT AFALPI
Sbjct: 64 VKTFRDLGIVDSLCDACERLGYKNPTPIQQEAIPLALQNRDIIGIAETGSGKTAAFALPI 123
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LQALL+ + FA VL+PTRELA QI++ FEALGS ISLRCA+++GG+DM+QQ
Sbjct: 124 LQALLDKPQ------PLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGLDMVQQA 177
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ALGK+PH+VVATPGRL+DHL TKGFSL LK+LV+DEADRLL+ DF L++IL +P
Sbjct: 178 IALGKKPHVVVATPGRLLDHLEKTKGFSLRNLKFLVMDEADRLLDMDFGPILEKILKFLP 237
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R R+T+LFSATM+ KV+ LQRA L++P+K+ ++SKY TV TL Q Y F+P +KD YL+
Sbjct: 238 RERRTFLFSATMSSKVESLQRASLRDPLKVSISSSKYQTVSTLVQNYIFIPHMHKDTYLI 297
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y+ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF+A +
Sbjct: 298 YLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRAKSRD 357
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIP+VD V+N+D+P +SK Y+HRVGRTARAG++G AIS V QY+LE +
Sbjct: 358 ILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRTARAGKSGHAISFVTQYDLEIW 417
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 425
L+IE +G KL E+ E++EV++ RV EA+R ++ +K R +KG GR+
Sbjct: 418 LRIEAALGTKLTEYATEKDEVMVFKPRVEEAQRHAKNEMKQLLEDRGKKGSVLKGGKGRK 477
Query: 426 FG 427
G
Sbjct: 478 RG 479
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/394 (59%), Positives = 304/394 (77%), Gaps = 7/394 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +LG+ + L +AC ++G+KTP+ IQ EAIP AL G+D+IGLA+TGSGKT AFALPIL
Sbjct: 58 KSFADLGVNESLCDACTSLGFKTPTAIQREAIPLALSGRDIIGLAETGSGKTAAFALPIL 117
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL + FF VL+PTRELA QIS+QFEALGS I +RCAV+VGG+DM+ Q +
Sbjct: 118 QALLHDPQ------PFFGLVLAPTRELAYQISQQFEALGSLIRVRCAVIVGGMDMVPQAI 171
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHIVVATPGRL+DHL NTKGFSL +LKYL++DEADRLL+ DF LD+IL V+PR
Sbjct: 172 ALAKKPHIVVATPGRLLDHLENTKGFSLRSLKYLIMDEADRLLDLDFGPILDKILQVLPR 231
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T LFSATM K+ L RA L+NPV++ + S Y TV L QQY F+P K+KD YL++
Sbjct: 232 ERRTALFSATMNTKLDNLTRAALRNPVRVSISTSSYQTVANLLQQYIFIPHKHKDVYLIH 291
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+LTE S + ++FTRT T+ LA +LR L AIP+ G + QS RLGALNKF++G +I
Sbjct: 292 LLTEFSGQTCILFTRTVTETQRLAFLLRALNFSAIPLHGQLPQSARLGALNKFRSGSRSI 351
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+VIN+D+P +SK Y+HRVGRTARAG++GVA+S+V QY++E +
Sbjct: 352 LVATDVAARGLDIPSVDLVINFDLPPDSKTYVHRVGRTARAGKSGVAVSVVTQYDVEVFQ 411
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 400
+IEK +G+KL E EEV++ ERV A+R++
Sbjct: 412 RIEKALGRKLEERAVGREEVMVFAERVGAAQRVA 445
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/401 (56%), Positives = 313/401 (78%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+R+EL +ACEN+ + P+ IQA+AIP ALEG+D+IGLA+TGSGKT AF LPIL
Sbjct: 89 KTFADLGVREELCDACENLKFTNPTPIQAQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 148
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALLE + + F +L+PTRELA QI++Q +ALGS I+++CA LVGG+DM+ Q +
Sbjct: 149 QALLEKQQ------SLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAI 202
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHI+VATPGRL+DHL NTKGFSL LKY+VLDEADRLL+ DF LD+IL V+PR
Sbjct: 203 ALSKKPHIIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLPR 262
Query: 188 M-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYL+SATM+ KV+ LQRA L+NPV++ ++S + V TL Q+Y F+P KYKD YL+
Sbjct: 263 EGRHTYLYSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKYKDLYLI 322
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + T++F+RT + T+ +A++LR LG AIP+ G +SQS RLGALNKFK +
Sbjct: 323 HLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPLHGQLSQSARLGALNKFKTQSRD 382
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIP+VD+V+N+D+P++S+ Y+HRVGRTARAG++G A+S V QY+LE +
Sbjct: 383 ILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHRVGRTARAGKSGKAVSFVTQYDLEIW 442
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
L+IE +GK++PE ++E ++ +ERV EA+RI+ +KD
Sbjct: 443 LRIENALGKQIPEEVINKDEAMVYMERVNEAQRIAVREMKD 483
>gi|383854020|ref|XP_003702520.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Megachile rotundata]
Length = 404
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/426 (56%), Positives = 307/426 (72%), Gaps = 61/426 (14%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
T+K+LG+ D L +ACE++ WK+P+KIQ E+IP L+GKD+IGLA+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGIVDVLCKACEDLKWKSPTKIQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQ 78
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALLE QR +FA +L+PTRELA QISEQFEALGS I ++CAV+VGG+DMM Q L
Sbjct: 79 ALLE--NPQR----YFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALI 132
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+DEADR+LN DFE +D+IL VIPR
Sbjct: 133 LAKKPHILIATPGRLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRE 192
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+K+
Sbjct: 193 RRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKN------- 245
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
KR+ AL KFKA +ILI
Sbjct: 246 ------------------------------------------KRIAALTKFKAKNRSILI 263
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y +I
Sbjct: 264 STDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELYQRI 323
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD------SGNKRRRKGGDEDDDI 422
E+LI K+LP +P +EEEV++L ERV EA+RI +M +KD SG +++ +GGDEDDD
Sbjct: 324 EQLISKQLPLYPTQEEEVMVLQERVAEAQRIVKMELKDIEENKKSGKRKKHQGGDEDDDT 383
Query: 423 GRQFGI 428
+ G+
Sbjct: 384 EQSMGV 389
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/401 (56%), Positives = 313/401 (78%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+R+EL +ACEN+ + P+ IQA+AIP AL+G+D+IGLA+TGSGKT AF LPIL
Sbjct: 89 KTFADLGVREELCDACENLKFTNPTPIQAQAIPLALQGRDVIGLAETGSGKTAAFVLPIL 148
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALLE + + F +L+PTRELA QI++Q +ALGS I+++CA LVGG+DM+ Q +
Sbjct: 149 QALLEKQQ------SLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAI 202
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PHI+VATPGRL+DHL NTKGFSL LKY+VLDEADRLL+ DF LD+IL V+PR
Sbjct: 203 ALSKKPHIIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLPR 262
Query: 188 M-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYLFSATM+ KV+ LQRA L+NPV++ ++S + V TL Q+Y F+P KYKD YL+
Sbjct: 263 EGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKYKDLYLI 322
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + T++F+RT + T+ +A++LR LG AIP+ G +SQS RLGALNKFK +
Sbjct: 323 HLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPLHGQLSQSARLGALNKFKTQSRD 382
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIP+VD+V+N+D+P++S+ Y+HRVGRTARAG++G A+S V QY+LE +
Sbjct: 383 ILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHRVGRTARAGKSGKAVSFVTQYDLEIW 442
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
L+IE +GK++PE ++E ++ +ERV EA+RI+ +KD
Sbjct: 443 LRIENALGKQIPEEVINKDEAMVYMERVNEAQRIAVREMKD 483
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/417 (56%), Positives = 317/417 (76%), Gaps = 9/417 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+F++LG+ + L EACE + +K P+ IQ +AIP AL+G+D+IG+A+TGSGKT AF
Sbjct: 105 EETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAF 164
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM
Sbjct: 165 ALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDM 218
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q++ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+DEADRLL+ DF LD+IL
Sbjct: 219 VSQSIALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKIL 278
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
+PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+ TV TL Q F+P K+KD
Sbjct: 279 KFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPLFIPHKHKD 338
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+ E + +T+VFTRT + + ++++LR L AIP+ G +SQS RLGALNKFKA
Sbjct: 339 VYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLHGQLSQSMRLGALNKFKA 398
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGRTARAGR+G AIS++ QY+
Sbjct: 399 RSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYD 458
Query: 362 LEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++ +K R +KG
Sbjct: 459 LELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAREEMKALHEDRGKKGA 515
>gi|301610484|ref|XP_002934776.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 399
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/408 (58%), Positives = 299/408 (73%), Gaps = 55/408 (13%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+E KTF+ELG+ D L E CE +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 15 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 74
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ LLE + +A VL+PTRELA QISEQFEALGS I ++ AV+VGG+DMM
Sbjct: 75 LPILQTLLESPQR------LYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMM 128
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 129 SQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 188
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+K+
Sbjct: 189 VIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKN-- 246
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
KRLG+LNKFKA
Sbjct: 247 -----------------------------------------------KRLGSLNKFKAKS 259
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G AI+ V+QY++E
Sbjct: 260 RSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVSQYDVE 319
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+ +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +++ G K+
Sbjct: 320 LFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIELREHGEKK 367
>gi|392595723|gb|EIW85046.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 465
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/423 (56%), Positives = 313/423 (73%), Gaps = 27/423 (6%)
Query: 13 LGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE 72
LGL D L++A + V +K P++IQ++A+P AL G+D+IG+A+TGSGKT AFALPILQ L E
Sbjct: 20 LGLIDPLLKALDQVNFKQPTEIQSQALPSALLGRDIIGVAETGSGKTAAFALPILQKLWE 79
Query: 73 IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKR 132
+ FAC+L+PTRELA QIS+QFE+LGS + +RC VLVGGVD M Q +AL KR
Sbjct: 80 EPK------GLFACILAPTRELAYQISQQFESLGSAMGVRCLVLVGGVDRMPQAVALAKR 133
Query: 133 PHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTY 192
PHI+VATPGRL DHL NTKGFSL +LK+LVLDEADRLL+ DF +D+IL VIP+ R TY
Sbjct: 134 PHIIVATPGRLNDHLQNTKGFSLRSLKFLVLDEADRLLDMDFGPDIDQILKVIPKERTTY 193
Query: 193 LFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS 252
LFSATMT KV KLQRA L NPV++E +SKY TV TL Q Y F+P KD +LVY++ ++
Sbjct: 194 LFSATMTTKVAKLQRASLSNPVRVEVSSKYQTVSTLLQYYLFIPLAQKDVHLVYLVNSLA 253
Query: 253 ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDV 312
++S ++FTRT + L+++LR LG A+P+ G +SQS+RLGAL KFK+G NIL+ TDV
Sbjct: 254 SNSIILFTRTVHDAQRLSIVLRTLGFPAVPLHGQLSQSQRLGALGKFKSGGRNILVATDV 313
Query: 313 AS----------------RGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
AS RGLD+PSVD+VIN+DIP++SKDYIHRVGRTARAGR+G ++++
Sbjct: 314 ASRHVLHSGFMGPTDHHYRGLDLPSVDVVINFDIPSHSKDYIHRVGRTARAGRSGKSVTI 373
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK-----DSGNKR 411
V QY++E +IE +I KK+ +P +EEEV LL ERV EA R++ +K + G KR
Sbjct: 374 VTQYDVELIQRIETVIAKKMELWPTDEEEVALLRERVEEAGRVAINELKEEARFNEGRKR 433
Query: 412 RRK 414
RR+
Sbjct: 434 RRE 436
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/417 (56%), Positives = 316/417 (75%), Gaps = 9/417 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+F++LG+ + L EACE + +K P+ IQ +AIP AL+G+D+IG+A+TGSGKT AF
Sbjct: 129 EETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAF 188
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM
Sbjct: 189 ALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDM 242
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+ ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+DEADRLL+ DF LD+IL
Sbjct: 243 VSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKIL 302
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
+PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+ TV TL Q F+P K+KD
Sbjct: 303 KFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPLFIPHKHKD 362
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+ E + +T+VFTRT + + ++++LR L AIP+ G +SQS RLGALNKFKA
Sbjct: 363 VYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLHGQLSQSMRLGALNKFKA 422
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGRTARAGR+G AIS++ QY+
Sbjct: 423 RSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYD 482
Query: 362 LEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++ +K R +KG
Sbjct: 483 LELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAREEMKALHEDRGKKGA 539
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/419 (56%), Positives = 303/419 (72%), Gaps = 7/419 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + K+F EL L EL+EA + + + P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 61 ELKFKSFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFA 120
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQAL E A++ VL+PTRELA QI E F+ALGS + LR +VGG+DMM
Sbjct: 121 IPILQALWEAQA------AYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMM 174
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 175 DQARDLMRKPHILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 234
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+IP R TYLFSATMT K+ KLQRA L NPV++ ++KY T D L Q V YK+ Y
Sbjct: 235 IIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAVSNKYQTADNLVQSMMLVSDGYKNTY 294
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S ++FTRTC ++ AL+ R LG A+P+ G ++Q++RLG+LNKFKAG+
Sbjct: 295 LIHLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAGK 354
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAG++G +ISL+ QY+LE
Sbjct: 355 ANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGKSGKSISLITQYDLE 414
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
YL+IE ++GKKLP+ P+ + VL L V A + KD KR K +D D
Sbjct: 415 MYLRIESVLGKKLPKDPSPSKAVLDTLHVHVDRASAEAIRQTKDFHEKRNPKKNRDDRD 473
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/417 (56%), Positives = 316/417 (75%), Gaps = 9/417 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+F++LG+ + L EACE + +K P+ IQ +AIP AL+G+D+IG+A+TGSGKT AF
Sbjct: 105 EETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAF 164
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM
Sbjct: 165 ALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDM 218
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+ ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+DEADRLL+ DF LD+IL
Sbjct: 219 VSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKIL 278
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
+PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+ TV TL Q F+P K+KD
Sbjct: 279 KFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPLFIPHKHKD 338
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+ E + +T+VFTRT + + ++++LR L AIP+ G +SQS RLGALNKFKA
Sbjct: 339 VYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLHGQLSQSMRLGALNKFKA 398
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGRTARAGR+G AIS++ QY+
Sbjct: 399 RSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYD 458
Query: 362 LEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++ +K R +KG
Sbjct: 459 LELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAREEMKALHEDRGKKGA 515
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/418 (57%), Positives = 304/418 (72%), Gaps = 7/418 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E++ TF EL L EL+EA E + + P+ IQ+ AIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 60 EQQFHTFSELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFA 119
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ+L E QR ++A VL+PTRELA QI E F+ALGSG+ +R +VGG+DMM
Sbjct: 120 IPILQSLWEA---QR---PYYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMM 173
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL NTKGFSL +L+YLV+DEADRLL+ DF +LD+IL
Sbjct: 174 DQARDLMRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILK 233
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K+ KLQRA L PVK+ ++KY T D L Q V YK+ +
Sbjct: 234 VIPTKRTTYLFSATMTNKIAKLQRASLHEPVKVAVSNKYQTADNLVQSMMLVSDGYKNTF 293
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRTC T+ L+ R LG A+P+ G ++QS+RLG+LNKFK+G+
Sbjct: 294 LIHLLNEFMGKSIIVFTRTCAHTQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGK 353
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAG++G +ISLV QY+LE
Sbjct: 354 ANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLE 413
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
YL+IE ++G KLP+ P+ +VL L V A + KD KR +K D+ D
Sbjct: 414 MYLRIESVLGFKLPKDPSPPRDVLNALHVHVDRASAEAIKQTKDFHEKRTKKKRDDRD 471
>gi|171691382|ref|XP_001910616.1| hypothetical protein [Podospora anserina S mat+]
gi|170945639|emb|CAP71752.1| unnamed protein product [Podospora anserina S mat+]
Length = 490
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/413 (56%), Positives = 314/413 (76%), Gaps = 7/413 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E KTFK+LG+ D L EAC+ +G+K P+ IQ EAIP AL+ +D+IG+A+TGSGKT AFA
Sbjct: 58 EAAPKTFKDLGIVDSLCEACDRLGYKQPTAIQQEAIPLALQDRDIIGIAETGSGKTAAFA 117
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQALL+ + FA VL+PTRELA QI++ FEALGS I+LRCA+L+GG+DM+
Sbjct: 118 LPILQALLDKPQ------PLFALVLAPTRELAAQIAQSFEALGSLINLRCALLLGGLDMV 171
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
QQ +ALGK+PH+VVATPGRL+DHL TKGFSL L+Y V+DEADRLL+ DF L++IL
Sbjct: 172 QQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYCVMDEADRLLDMDFGPILEKILK 231
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDC 242
+PR R+T+LFSATM+ KV+ LQRA L++P+K+ + SKY TV TL Y F+P +KD
Sbjct: 232 FLPRERRTFLFSATMSSKVESLQRASLRDPLKVNVSTSKYQTVSTLVSNYLFIPHIHKDT 291
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
Y +Y+ E + + +VFTRT T+ +A++LR LG AIP+ G +SQS RLGAL+KF+AG
Sbjct: 292 YFIYLCNEFAGKTMIVFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALSKFRAG 351
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
NIL+ TDVA+RGLDIP+VD VINYD+P +SK YIHRVGRTARAG++G A+S+V QY+L
Sbjct: 352 TRNILVATDVAARGLDIPNVDCVINYDLPQDSKTYIHRVGRTARAGKSGHALSIVTQYDL 411
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
E + +IE +G KL E+ E++EV++ RV EA+R ++ +K+ + R +KG
Sbjct: 412 EIWTRIEAALGTKLTEYAYEKDEVMVFKPRVEEAQRHARNEMKNLIDDRGKKG 464
>gi|297738293|emb|CBI27494.3| unnamed protein product [Vitis vinifera]
Length = 298
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/298 (84%), Positives = 278/298 (93%), Gaps = 5/298 (1%)
Query: 144 MDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVK 203
MDHL+NTKGFSL T+KYLVLDEADRLLNDDFEK++DEIL+VIP+ R+TYLFSATMTKKV+
Sbjct: 1 MDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEILSVIPQERKTYLFSATMTKKVR 60
Query: 204 KLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC 263
KLQRACL+NPVKIEA SKYSTVDTLKQQYRFVPAKYK+CYLVYILTE+S S+TMVFTRTC
Sbjct: 61 KLQRACLRNPVKIEAGSKYSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTC 120
Query: 264 DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVD 323
DATRLLAL+LRNLG AIPISGHMSQ+KRLGALNKFKAGECNILICTDVASRGLDIPSVD
Sbjct: 121 DATRLLALLLRNLGLGAIPISGHMSQTKRLGALNKFKAGECNILICTDVASRGLDIPSVD 180
Query: 324 MVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 383
MVINYDIP+NSKDYIHRVGRTA AGR+GVAISLVNQYELEWY+QIEKLIGKKLPEFPA+E
Sbjct: 181 MVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQE 240
Query: 384 EEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDE-DDDIGRQF----GINKKKLSKR 436
EEVLLLLERVTEAKRISQM IK++G K++R+GGDE +++I R G + KKL KR
Sbjct: 241 EEVLLLLERVTEAKRISQMKIKETGGKKKRRGGDEGEEEIDRYLASKNGKSSKKLKKR 298
>gi|396459541|ref|XP_003834383.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
gi|312210932|emb|CBX91018.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
Length = 516
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/401 (57%), Positives = 310/401 (77%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+R+EL +ACEN+ + TP+ IQ +AIP ALEG+D+IGLA+TGSGKT AF LPIL
Sbjct: 87 KTFADLGVREELCDACENLKFTTPTPIQTQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 146
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + A F +L+PTRELA QI++Q +ALGS I+++CA LVGG+DM+ Q +
Sbjct: 147 QALLDKPQ------ALFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAI 200
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPHIVVATPGRL+DHL NTKGFSL LKY+VLDEADRLL+ DF LD+IL V+PR
Sbjct: 201 ALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILRVLPR 260
Query: 188 -MRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYLFSATM+ KV+ LQRA L+NPV++ ++S + V TL Q+Y F+P K+KD YL+
Sbjct: 261 DGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRYLFIPHKHKDLYLI 320
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++LT+ T++FTRT + T +A++LR LG AIP+ G +SQS RLGALNKFK +
Sbjct: 321 HLLTDNIGHPTIIFTRTVNETERIAILLRALGFGAIPLHGQLSQSARLGALNKFKTKSRD 380
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVASRGLDIP+VD+V+N D+P++S+ Y+HRVGRTARAG++G A S V QY++E +
Sbjct: 381 ILVATDVASRGLDIPAVDLVVNLDLPSDSQTYVHRVGRTARAGKSGKAFSFVTQYDVEIW 440
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
L+IE +GKK+ E +++E L +E V+EA+R++ +KD
Sbjct: 441 LRIEHALGKKIEEEVVDKDEALQYMESVSEAQRVAIREMKD 481
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/418 (57%), Positives = 304/418 (72%), Gaps = 7/418 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E++ TF EL L EL+EA E + + P+ IQ+ AIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 60 EQQFHTFLELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFA 119
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ+L E QR ++A VL+PTRELA QI E F+ALGSG+ +R +VGG+DMM
Sbjct: 120 IPILQSLWEA---QR---PYYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMM 173
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL NTKGFSL +L+YLV+DEADRLL+ DF +LD+IL
Sbjct: 174 DQARDLMRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILK 233
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K+ KLQRA L PVK+ ++KY T D L Q V YK+ +
Sbjct: 234 VIPTKRTTYLFSATMTNKIAKLQRASLHEPVKVAVSNKYQTADNLVQSMMLVSDGYKNTF 293
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRTC T+ L+ R LG A+P+ G ++QS+RLG+LNKFK+G+
Sbjct: 294 LIHLLNEFMGKSIIVFTRTCAHTQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGK 353
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAG++G +ISLV QY+LE
Sbjct: 354 ANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLE 413
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
YL+IE ++G KLP+ P+ +VL L V A + KD KR +K D+ D
Sbjct: 414 MYLRIESVLGFKLPKDPSPPRDVLNALHVHVDRASAEAIKQTKDFHEKRTKKKRDDRD 471
>gi|327272752|ref|XP_003221148.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Anolis carolinensis]
Length = 399
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/435 (54%), Positives = 307/435 (70%), Gaps = 57/435 (13%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FKELG+ + L EAC+ +GWKTP+KIQ E+IP AL+G+D+IGLA+TGSGKTGAFALPIL
Sbjct: 16 KSFKELGVTEVLCEACDQLGWKTPTKIQVESIPLALQGRDIIGLAETGSGKTGAFALPIL 75
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALLE + FFA VL+PTRELA QISEQFEALGS I ++ AV+VGG+DMM Q+L
Sbjct: 76 QALLETPQR------FFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDMMAQSL 129
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR
Sbjct: 130 ALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 189
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T+LFSATMTKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD YLVYI
Sbjct: 190 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYVFIPSKFKDSYLVYI 249
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E++ +S M+F TC+ T+ AL+LRNLG AIP+ G M+Q
Sbjct: 250 LNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMNQ------------------ 291
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
DYIHRVGRTARAGR+G +I+ V QY++E + +
Sbjct: 292 ----------------------------DYIHRVGRTARAGRSGKSITFVTQYDVELFQR 323
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR-RKGGDEDDDIGRQF 426
IE LIGKKLP FP +E+EV++L ERV EA+R ++M ++ G+K+R R+ +E DD
Sbjct: 324 IEHLIGKKLPAFPTQEDEVMMLTERVAEAQRFARMELQQKGDKKRSREEANEPDDAEGAM 383
Query: 427 GINKK----KLSKRK 437
G+ K K KRK
Sbjct: 384 GVRNKVAGGKKKKRK 398
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/417 (56%), Positives = 317/417 (76%), Gaps = 9/417 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+F++LG+ + L EACE + +K P+ IQ +AIP AL+G+D+IG+A+TGSGKT AF
Sbjct: 105 EETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAF 164
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM
Sbjct: 165 ALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDM 218
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q++ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+DEADRLL+ DF LD+IL
Sbjct: 219 VSQSIALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKIL 278
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
+PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+ TV TL Q F+P K+KD
Sbjct: 279 KFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPLFIPHKHKD 338
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+ E + +T+VFTRT + + ++++LR L AIP+ G +SQS RLGALNKFKA
Sbjct: 339 VYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLHGQLSQSMRLGALNKFKA 398
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGRTARAGR+G AIS++ QY+
Sbjct: 399 RSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYD 458
Query: 362 LEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++ +K R +KG
Sbjct: 459 LELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAREEMKALHEDRGKKGA 515
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/392 (57%), Positives = 304/392 (77%), Gaps = 7/392 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELGL D L EAC+ +G+K P+ IQ+E+IP AL+G+D+IGLA+TGSGKT +F LPIL
Sbjct: 71 KTFKELGLIDSLCEACDKMGYKAPTPIQSESIPLALQGRDIIGLAETGSGKTASFVLPIL 130
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E ++ FF VL+PTRELA QIS E+LG+ I++R LVGG+DM+ Q++
Sbjct: 131 QALMEKPQS------FFGLVLAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSI 184
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL +LK+LV+DEADRLL+ DF LD+IL V+PR
Sbjct: 185 ALGKKPHIIVATPGRLLDHLENTKGFSLRSLKFLVMDEADRLLDMDFGPILDKILKVLPR 244
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSAT++ KV+ LQRA L NP ++ ++SKY+TV+TL+Q Y P K+KD YLVY
Sbjct: 245 ERRTFLFSATLSSKVESLQRASLSNPARVSISSSKYATVETLQQTYLLRPYKHKDIYLVY 304
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E S ++F RT T+ +A +LR LG AIP+ G MSQS RLGAL KF++ I
Sbjct: 305 LLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPLHGQMSQSARLGALGKFRSKSREI 364
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD V+N+D+PT+SK YIHRVGRTARAG++G AIS V QY++E +
Sbjct: 365 LVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHRVGRTARAGKSGTAISFVTQYDVEIWQ 424
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
+IE +GK+L E+PA ++E ++ E+V+ ++R
Sbjct: 425 RIEAAMGKELAEYPAPKDEAMVFAEQVSASQR 456
>gi|321464143|gb|EFX75153.1| hypothetical protein DAPPUDRAFT_226459 [Daphnia pulex]
Length = 447
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/398 (59%), Positives = 295/398 (74%), Gaps = 21/398 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGLR EL EAC + W P+ IQ EAIP AL+G+D+IGLA+TGSGKTGAF LP+L
Sbjct: 26 TFVELGLRSELEEACNLLKWTEPTPIQREAIPLALQGRDVIGLAETGSGKTGAFTLPMLH 85
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+LL + QR F +L+PTRELA QISEQ EALGS I ++CAV+VGG+DM+ Q+L
Sbjct: 86 SLL--SNPQR----LFGLILTPTRELAFQISEQIEALGSSIGVKCAVIVGGIDMISQSLM 139
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHIV+ATPGRL+DHL NTKGF+L +LKYL +D+IL IPR
Sbjct: 140 LAKKPHIVIATPGRLVDHLENTKGFNLKSLKYL---------------EVDKILKSIPRE 184
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSATMT KV+KLQRA L NPV+++ +SKY TVD L Q Y F+P K KD YLV++L
Sbjct: 185 RRTLLFSATMTSKVQKLQRASLVNPVRVQISSKYQTVDKLLQYYVFIPLKMKDVYLVHLL 244
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E + S MVF TC +T +L+LR LG A+P+ G M+Q+KRL ALNKFKA +L+
Sbjct: 245 NEAAGHSVMVFCSTCSSTLRTSLLLRALGISAVPLHGQMTQNKRLAALNKFKARNRGVLL 304
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRTARAGR+G AIS V QY++E Y +I
Sbjct: 305 ATDVASRGLDIPHVDWVINYDIPTHSKDYIHRVGRTARAGRSGKAISFVTQYDVELYQRI 364
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E L+GK+LP + EE +V+ L ERV EA+R+++M +++
Sbjct: 365 EHLLGKQLPLYGLEEGDVMSLQERVAEAQRVAKMDLRE 402
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/397 (57%), Positives = 303/397 (76%), Gaps = 7/397 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KTFKELGL D L EAC+ +G+K P+ IQ+E+IP AL+G+D+IGLA+TGSGKT +F
Sbjct: 67 EPSAPKTFKELGLIDSLCEACDKMGYKAPTPIQSESIPLALQGRDIIGLAETGSGKTASF 126
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LPILQAL+E + FF V++PTRELA QIS E+LG+ I++R LVGG+DM
Sbjct: 127 VLPILQALMEKPQ------PFFGLVMAPTRELAYQISLACESLGATINVRSTTLVGGMDM 180
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LK+LV+DEADRLL+ DF LD+IL
Sbjct: 181 VPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKFLVMDEADRLLDMDFGPILDKIL 240
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
V+PR R+T+LFSAT++ KV+ LQRA L NP ++ ++SKY+TV+TL+Q Y P K+KD
Sbjct: 241 KVLPRERRTFLFSATLSSKVESLQRASLSNPARVSISSSKYATVETLQQTYILRPYKHKD 300
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E S ++F RT T+ +A +LR LG AIP+ G MSQS RLGAL KF++
Sbjct: 301 IYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPLHGQMSQSARLGALGKFRS 360
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
IL+ TDVA+RGLDIPSVD V+N+D+PT+SK YIHRVGRTARAG++G AIS V QY+
Sbjct: 361 KSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHRVGRTARAGKSGTAISFVTQYD 420
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
+E + +IE +GK+L EFPA ++E ++ E+V+ ++R
Sbjct: 421 VEIWQRIEAAMGKELAEFPAPKDEAMVFAEQVSASQR 457
>gi|255722942|ref|XP_002546405.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
gi|240130922|gb|EER30484.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
Length = 483
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/422 (56%), Positives = 304/422 (72%), Gaps = 12/422 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + KTFKEL L +L+E+ EN+ + P+ IQ+E+IPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 64 ELKFKTFKELNLVPDLLESIENMKFTKPTPIQSESIPHALEGKDIIGLAQTGSGKTAAFA 123
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ+L + +F VL+PTRELA QI E F+ALGS + LR + +VGG+DMM
Sbjct: 124 IPILQSLWHAQQ------PYFGLVLAPTRELAFQIKETFDALGSSMGLRSSCIVGGMDMM 177
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL +TKGF+L LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 178 DQARDLMRKPHIIVATPGRIMDHLEHTKGFTLKNLKYLVMDEADRLLDMDFGPALDKILK 237
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T D L Q V YK+
Sbjct: 238 VIPTKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYKNTI 297
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E + S +VFTRT + AL+ R LG A+P+ G +SQS+RLG+LNKFK+
Sbjct: 298 LIHLLNEFMSKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNT 357
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+LE
Sbjct: 358 ANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLE 417
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEA-----KRISQMTIKDSGNKRRRKGGD 417
YL+IE ++G KLP+ +EVL L V +A ++ ++ K GN RRR D
Sbjct: 418 MYLRIESVLGYKLPKEDKPPKEVLDALHIHVDKATAEAIRQTKELHEKRGGNNRRRNKDD 477
Query: 418 ED 419
D
Sbjct: 478 AD 479
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/422 (56%), Positives = 307/422 (72%), Gaps = 9/422 (2%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K ++F EL L EL+EA +++ + P+ IQAEAIPHALEGKD+IGLA TGSGKT AFA+
Sbjct: 62 KRFESFTELKLIPELLEAIQSMKFTKPTPIQAEAIPHALEGKDVIGLAVTGSGKTAAFAI 121
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ+L +P ++ VLSPTRELA QI + F+ALGSG+ LR +VGG+DMM
Sbjct: 122 PILQSLW-----HDQLP-YYCLVLSPTRELAYQIKDTFDALGSGMGLRACCIVGGMDMMD 175
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L ++PH++VATPGR++DHL +TKGFSL LKYLV+DEADRLL+ DF LD+IL V
Sbjct: 176 QARDLMRKPHVIVATPGRIVDHLEHTKGFSLKNLKYLVMDEADRLLDLDFGPELDKILRV 235
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IPR R TYLFSATMT K++KLQRA L NPV+I +SKY T D L Q V YK+ YL
Sbjct: 236 IPRERNTYLFSATMTNKIEKLQRASLNNPVRIAVSSKYQTADNLVQSMMLVSDGYKNTYL 295
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
V++L E S ++FTRTC ++ AL+ R LG A+P+ G +SQS+RLG+LNKFK+G+
Sbjct: 296 VHLLNEFVGKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLSQSQRLGSLNKFKSGKA 355
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NIL+ TDVA+RGLDIP+VD+VINYDIPT+SK YIHRVGRTARAGR+G +ISLV QY+LE
Sbjct: 356 NILVATDVAARGLDIPAVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLVTQYDLEM 415
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDED-DDIG 423
YL+IE ++ KKLP+ PA ++VL L R + IK + + +KG + DD
Sbjct: 416 YLRIEAVLQKKLPKDPAPPKDVLDALH--VHVDRATAEAIKQTKDFHEKKGKKKSRDDAD 473
Query: 424 RQ 425
R+
Sbjct: 474 RE 475
>gi|409045997|gb|EKM55477.1| hypothetical protein PHACADRAFT_184272 [Phanerochaete carnosa
HHB-10118-sp]
Length = 472
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/431 (55%), Positives = 303/431 (70%), Gaps = 29/431 (6%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+E +FK LGL D L+EA + + + +P+ IQ A+PHALEG+D+IG+A TGSGKT AFAL
Sbjct: 18 QEKPSFKALGLIDPLLEALQQLSFTSPTDIQTAALPHALEGRDIIGVASTGSGKTAAFAL 77
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ L + FACV++PTRELA QI+E FEALGS + +RCA +VGG+D M
Sbjct: 78 PILQKLWDDPRG------LFACVIAPTRELAYQITEHFEALGSAMGVRCATVVGGIDEMS 131
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q +AL K+PH+VVATPGRL HL NTKGFSL +LK+LVLDEADRLL+ DF LD+IL V
Sbjct: 132 QAVALAKKPHVVVATPGRLQYHLENTKGFSLRSLKFLVLDEADRLLDMDFGPILDKILKV 191
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY------------------STVD 226
IP+ R TYLFSATMT KV KLQRA L NPV++E + KY STV
Sbjct: 192 IPQERTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYAPLLLIRLLMRLRVSRRYSTVS 251
Query: 227 TLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGH 286
TL Q Y F+P KD L+Y+ ++++S ++FTRT + LA+M+R LG A+P+ G
Sbjct: 252 TLLQYYLFIPLVQKDVNLMYLANSLASNSIIIFTRTVHDCQRLAIMMRTLGFPAVPLHGQ 311
Query: 287 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 346
+SQS RLGAL KFK+G +L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRTAR
Sbjct: 312 LSQSARLGALGKFKSGGRKVLVATDVASRGLDIPHVDAVINYDIPTHSKDYIHRVGRTAR 371
Query: 347 AGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
AGR+G +I+ V QY++E +IE + GKKL +P ++EE+ LL ERV EA R + +KD
Sbjct: 372 AGRSGKSITFVTQYDVELVQRIESVTGKKLELWPTDKEEIALLRERVDEAGRAATNELKD 431
Query: 407 S-----GNKRR 412
G KRR
Sbjct: 432 QAKEGRGRKRR 442
>gi|449017072|dbj|BAM80474.1| DEAD box protein [Cyanidioschyzon merolae strain 10D]
Length = 453
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/430 (58%), Positives = 311/430 (72%), Gaps = 28/430 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LG+ L +AC + ++ P+ IQ EAIP AL GKD++GLAQTGSGKT AFA+PILQ
Sbjct: 20 SFAALGVCAVLCDACRLLNYREPTPIQREAIPAALAGKDIVGLAQTGSGKTAAFAIPILQ 79
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LLE + R +FA VLSPTRELA QISEQF ALGS I +R A LVGG+DM+ Q +
Sbjct: 80 FLLE---DPR---PYFALVLSPTRELAFQISEQFLALGSEIGVRVATLVGGMDMVGQAVT 133
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR- 187
L KRPH+VV TPGR++DHLT TKGF+L ++ LVLDEADRLLN DFE+ LD+IL +PR
Sbjct: 134 LAKRPHVVVGTPGRVVDHLTATKGFTLKHVRILVLDEADRLLNMDFEEELDQILAAVPRS 193
Query: 188 ----------MRQTYLFSATMTKKVKKLQRACL--KNPVKIEAASKYSTVDTLKQQYRFV 235
R+TYLFSATMT +V KLQRA L K V+IE ++KYSTV+TL Q Y F+
Sbjct: 194 DADPSKGETFARKTYLFSATMTSQVAKLQRASLRSKETVRIEVSAKYSTVETLVQHYLFI 253
Query: 236 PAKYKDCYLVYILTE-VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
P KYKDCYL Y+ E V+ S +VFT T + + LALMLRNLG A+ I G MSQ RLG
Sbjct: 254 PEKYKDCYLTYLFEELVARHSCIVFTDTQSSAQRLALMLRNLGYGAVCIHGGMSQPNRLG 313
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
ALN+FK+GE +IL+ TDVASRGLDIP VD VINYDIP + KDYIHRVGRTARAGRTG AI
Sbjct: 314 ALNQFKSGEKHILVATDVASRGLDIPLVDFVINYDIPPHGKDYIHRVGRTARAGRTGRAI 373
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKD------- 406
SLV+QY++E + ++EKL+G++L ++E VLLLL+RV+EA R++ I++
Sbjct: 374 SLVSQYDVELFQKVEKLLGRQLEALAGVQQEHVLLLLDRVSEAARLAVQEIREEKLVLHA 433
Query: 407 SGNKRRRKGG 416
+ KRR G
Sbjct: 434 AARKRRIPAG 443
>gi|241959442|ref|XP_002422440.1| ATP-dependent rRNA helicase, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223645785|emb|CAX40447.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 499
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/384 (59%), Positives = 290/384 (75%), Gaps = 6/384 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + KTFKEL L +L+E+ E++ + P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 82 ELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFA 141
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ+L + +FA VL+PTRELA QI + F+ALGS + LR + +VGG+DMM
Sbjct: 142 IPILQSLWHAQQ------PYFALVLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMM 195
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 196 DQARDLMRKPHIIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 255
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K++KLQRA L NPVK+ +SKY T D L Q V YK+
Sbjct: 256 VIPIKRITYLFSATMTNKIEKLQRASLHNPVKVSVSSKYQTADNLIQSMMLVNDGYKNTI 315
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRT + AL+ R LG A+P+ G +SQS+RLG+LNKFK+ +
Sbjct: 316 LIHLLNEFIGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQ 375
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+LE
Sbjct: 376 ANILVATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLE 435
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVL 387
YL+IE ++GKKLP+ +E+L
Sbjct: 436 MYLRIENVLGKKLPKEDKPPKEIL 459
>gi|242222657|ref|XP_002477039.1| predicted protein [Postia placenta Mad-698-R]
gi|220723636|gb|EED77767.1| predicted protein [Postia placenta Mad-698-R]
Length = 389
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/376 (60%), Positives = 285/376 (75%), Gaps = 6/376 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL D L+EA E + +K P++IQ +A+PHAL+G+D+IG+A TGSGKT AFALPILQ
Sbjct: 20 TFKSLGLIDPLLEALEQLNFKIPTEIQVQALPHALQGRDIIGVASTGSGKTAAFALPILQ 79
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + FAC+++PTRELA QIS+Q EALGS + +RC LVGG+D M Q +A
Sbjct: 80 KLWEEPKG------LFACIMAPTRELAYQISQQIEALGSAMGVRCVTLVGGMDKMAQAVA 133
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVVATPGRL DHL +TKGFSL LK+LVLDEADRLL+ DF +D+IL IPR
Sbjct: 134 LAKRPHIVVATPGRLNDHLEDTKGFSLRGLKFLVLDEADRLLDMDFGPIIDKILKAIPRE 193
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NPV++E + KYSTV TL Q Y F+P KD +L+Y+
Sbjct: 194 RTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYSTVSTLLQYYLFIPLVQKDVHLIYLA 253
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ +S ++FTRT + L+++LR LG A+P+ G +SQS RLGAL KFK+G +L+
Sbjct: 254 NILAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLHGQLSQSARLGALGKFKSGGRKVLV 313
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVASRGLDIP VD+VINYDIPT+SKDYIHRVGRTARAGR+G +I+LV QY++E +I
Sbjct: 314 ATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGKSITLVTQYDVELIQRI 373
Query: 369 EKLIGKKLPEFPAEEE 384
E IGKK+ +P + E
Sbjct: 374 ETTIGKKMELWPTDAE 389
>gi|161784286|sp|Q5ACU6.2|RRP3_CANAL RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 539
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/384 (58%), Positives = 289/384 (75%), Gaps = 6/384 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + KTFKEL L +L+E+ E++ + P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 119 ELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFA 178
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ+L + +FA VL+PTREL QI + F+ALGS + LR + +VGG+DMM
Sbjct: 179 IPILQSLWHAQQ------PYFALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMM 232
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PH++VATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 233 DQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 292
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T D L Q V YK+
Sbjct: 293 VIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYKNTI 352
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRT + AL+ R LG A+P+ G +SQS+RLG+LNKFK+ +
Sbjct: 353 LIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQ 412
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+LE
Sbjct: 413 ANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLE 472
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVL 387
YL+IE ++GKKLP+ +EVL
Sbjct: 473 MYLRIESVLGKKLPKEDKPPKEVL 496
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/400 (58%), Positives = 301/400 (75%), Gaps = 6/400 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+TF LG+ EL ++C + +K P+ IQ EAIP AL+G+D+IGLAQTGSGKT AF+LPIL
Sbjct: 46 RTFASLGIIPELCQSCATLAFKAPTPIQVEAIPSALQGRDVIGLAQTGSGKTAAFSLPIL 105
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q L E + FFA +L+PTRELA QIS+Q +LGS + +R AV+VGG+DMM Q++
Sbjct: 106 QKLWENPQ------PFFALILAPTRELAYQISQQVTSLGSPLGVRTAVIVGGMDMMSQSI 159
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPH++VATPGRLMDHL NTKGFSL +K+LV+DEADRLL+ DF +D+IL VIP+
Sbjct: 160 ALSKRPHVIVATPGRLMDHLENTKGFSLKNVKFLVMDEADRLLDMDFGPIIDKILKVIPK 219
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT KV KLQRA L PV++E A+KYSTV TL Q Y +P K KD +L+YI
Sbjct: 220 ERNTYLFSATMTTKVAKLQRASLNKPVRVEVATKYSTVSTLLQHYLLLPLKAKDTHLLYI 279
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+TE+S+ S ++FTRT + L++MLR LG AIP+ G MSQS RL +LNKFK+G +IL
Sbjct: 280 VTELSSCSMIIFTRTVVDAQRLSIMLRRLGFPAIPLHGQMSQSLRLASLNKFKSGGRSIL 339
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP VD+V+NYD+P NSKDY+HRVGRTARAGR+G +I++V QY++E +
Sbjct: 340 VATDVASRGLDIPLVDLVVNYDMPINSKDYVHRVGRTARAGRSGKSITMVTQYDVEILQR 399
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
IE IGKK+ F ++E V E V A R + + +++S
Sbjct: 400 IEAHIGKKMENFAVDKEAVAAFSETVARANREAALEMRES 439
>gi|301610486|ref|XP_002934777.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Xenopus (Silurana) tropicalis]
Length = 402
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/408 (56%), Positives = 295/408 (72%), Gaps = 52/408 (12%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+E KTF+ELG+ D L E CE +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 15 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 74
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ LLE + +A VL+PTRELA QISEQFEALGS I ++ AV+VGG+DMM
Sbjct: 75 LPILQTLLESPQR------LYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMM 128
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 129 SQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 188
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD Y
Sbjct: 189 VIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKDSY 248
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+ G MSQ
Sbjct: 249 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQ-------------- 294
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
DYIHRVGRTARAGR+G AI+ V+QY++E
Sbjct: 295 --------------------------------DYIHRVGRTARAGRSGKAITFVSQYDVE 322
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+ +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +++ G K+
Sbjct: 323 LFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIELREHGEKK 370
>gi|38566158|gb|AAH62498.1| ddx47-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 401
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/408 (56%), Positives = 295/408 (72%), Gaps = 52/408 (12%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+E KTF+ELG+ D L E CE +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 14 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 73
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ LLE + +A VL+PTRELA QISEQFEALGS I ++ AV+VGG+DMM
Sbjct: 74 LPILQTLLESPQR------LYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMM 127
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 128 SQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 187
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD Y
Sbjct: 188 VIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKDSY 247
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+ G MSQ
Sbjct: 248 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQ-------------- 293
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
DYIHRVGRTARAGR+G AI+ V+QY++E
Sbjct: 294 --------------------------------DYIHRVGRTARAGRSGKAITFVSQYDVE 321
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+ +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +++ G K+
Sbjct: 322 LFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIELREHGEKK 369
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/334 (67%), Positives = 273/334 (81%), Gaps = 6/334 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 21 AEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 80
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 81 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 134
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 135 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 194
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 195 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 254
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 255 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 314
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSK 335
+IL+ TDVASRGLDIP VD+V+N+DIPT+SK
Sbjct: 315 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 348
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/415 (57%), Positives = 311/415 (74%), Gaps = 13/415 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K F GL + L+ + ++ W+ +KIQA +IP ALEG+D+IGLA+TGSGKTGAF++P+L
Sbjct: 54 KPFASFGLHETLLSSIASLKWENATKIQASSIPPALEGRDVIGLAETGSGKTGAFSIPVL 113
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
LLE + QR+V FA +L+PTRELA QI E ALGSG+ +VGGVDM Q +
Sbjct: 114 NYLLE--KPQRSV---FAVILAPTRELAFQIHEVVAALGSGMGASSVCVVGGVDMASQAI 168
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL + PH+VVATPGRL+DHL NTKGF L +KYLVLDEADR+L+ DFE+ ++EIL VIP
Sbjct: 169 ALARNPHVVVATPGRLLDHLQNTKGFHLRQIKYLVLDEADRMLSMDFEREINEILEVIPD 228
Query: 188 M---RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
R+T LFSATMT KV+KLQRA L +PV++E ++K+ T L Q Y F+PAKYKDCYL
Sbjct: 229 HEGGRRTMLFSATMTSKVEKLQRASLVDPVRVEVSTKFQTPKKLLQSYLFIPAKYKDCYL 288
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
Y++ E + S +VF TC+ + LALMLRNLG AI + G MSQ KRLGAL KFKAG
Sbjct: 289 TYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAICLHGQMSQPKRLGALTKFKAGGR 348
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+I+ICTDVASRGLDIPSVD+VIN+D+P + KDYIHRVGRTARAGR+G AI++V QY++E
Sbjct: 349 DIMICTDVASRGLDIPSVDVVINFDLPGHGKDYIHRVGRTARAGRSGKAIAMVTQYDVEV 408
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGNKRRRK 414
Y ++E L+G++LPE+ EEEVLLLLERV +A+R++ +K+ GN++ RK
Sbjct: 409 YQRLEHLLGQRLPEYKLAEEEVLLLLERVNDAQRLATRELKEQISTRDGNRKGRK 463
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/422 (54%), Positives = 302/422 (71%), Gaps = 11/422 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E +++F E L E++E+ + + + P+ IQAE+IPHAL GKD+IGLAQTGSGKT AFA
Sbjct: 69 ETAIQSFAEFDLIPEILESIQAMKFTKPTPIQAESIPHALAGKDIIGLAQTGSGKTAAFA 128
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQAL +F+ VL+PTRELA QI E F+ALGS + LR +VGG+DMM
Sbjct: 129 IPILQALWHAKT------PYFSLVLAPTRELAFQIKETFDALGSSMGLRSVCIVGGMDMM 182
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PH++VATPGR+ DHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 183 DQARDLMRKPHVIVATPGRITDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 242
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R +YLFSATMT K+ KLQRA LKNPV++ ++KY T D L Q V YK+ +
Sbjct: 243 VIPVERTSYLFSATMTNKIAKLQRASLKNPVRVAVSNKYQTADNLVQSMMLVSDGYKNTF 302
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LV++L E S +VFTRT + A++ R LG ++P++G +SQ++RLGALNKFK+G+
Sbjct: 303 LVHLLNEFMGKSIIVFTRTVANSERTAILTRLLGFSSVPLNGQLSQTQRLGALNKFKSGK 362
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAG++G +ISLV QY+LE
Sbjct: 363 ANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLE 422
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLE-----RVTEAKRISQMTIKDSGNKRRRKGGDE 418
YL+IE ++GKKLP+ P+ ++VL L V EA R + + GN+ R D
Sbjct: 423 LYLRIESVLGKKLPKDPSPSKQVLNTLHVHVDRAVAEAIRQMKDIHERRGNRNHRDNHDR 482
Query: 419 DD 420
++
Sbjct: 483 EE 484
>gi|444518869|gb|ELV12436.1| putative ATP-dependent RNA helicase DDX47 [Tupaia chinensis]
Length = 428
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 310/442 (70%), Gaps = 39/442 (8%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 18 GEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ A
Sbjct: 78 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSA------- 124
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
TPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 125 -----------------TPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 167
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 168 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 227
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 228 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 287
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SK G T +Y+
Sbjct: 288 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSK---FGSGEQLYYQPTKACQFSFLRYD 344
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR---KGGDE 418
+E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R GD
Sbjct: 345 VELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRTREDAGDN 404
Query: 419 DDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 405 DDTEGAIGVRNKVAGGKMKKRK 426
>gi|353241604|emb|CCA73408.1| probable DEAD box protein (putative RNA helicase) [Piriformospora
indica DSM 11827]
Length = 458
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/406 (57%), Positives = 300/406 (73%), Gaps = 6/406 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL EL++ E +G+K + IQA+AIP AL+ +D+IG+A+TGSGKT AFALPILQ
Sbjct: 33 FNTLGLIPELLQTVEALGYKNATSIQAQAIPSALQDRDIIGVAKTGSGKTAAFALPILQK 92
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E + +AC+L+PTRELA QI +QFEALG+ + +RC +VGG+D+M Q +AL
Sbjct: 93 WWEDPK------PLYACILAPTRELAYQIQKQFEALGANLGVRCCCIVGGLDIMAQKVAL 146
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHIVVATPGRL DHL NTKGFSL +LKYLVLDEADRLL+ DF +D+IL VIP+ R
Sbjct: 147 AKRPHIVVATPGRLQDHLENTKGFSLRSLKYLVLDEADRLLDMDFGPIIDKILKVIPKER 206
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
+T LFSATM+ KVK+LQRA L NPVK+E +SKYSTV TL+Q Y F P K+ ++ ++
Sbjct: 207 RTMLFSATMSTKVKRLQRASLVNPVKVEVSSKYSTVSTLQQYYVFGPHMRKEVNMITLVR 266
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+S S +VFT T + T L LMLR L AIP+ +SQS RLG+LNKF+AG +LI
Sbjct: 267 SLSGKSIIVFTNTVNDTIRLTLMLRALNIGAIPLHSKLSQSTRLGSLNKFRAGGRQVLIA 326
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVA+RGLDIP VD+VINY +P NSKDYIHRVGRTARAGR G AI+ V QY++E++L+IE
Sbjct: 327 TDVAARGLDIPQVDVVINYGVPQNSKDYIHRVGRTARAGRAGKAITFVTQYDIEFHLRIE 386
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++IGKK+ E+ E+E +L E+V EA R + M +KD + ++G
Sbjct: 387 EVIGKKMDEWVIPEQEAAMLAEKVEEAGRAAAMEMKDMNLSKGKEG 432
>gi|406603210|emb|CCH45247.1| ATP-dependent rRNA helicase RRP3 [Wickerhamomyces ciferrii]
Length = 488
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/390 (57%), Positives = 291/390 (74%), Gaps = 6/390 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ +FK+L L EL+EAC+ + + P+ IQAEAIPH +EG+DLIGLAQTGSGKT AFA+PI
Sbjct: 73 INSFKDLKLIPELLEACQALKFDKPTPIQAEAIPHGIEGRDLIGLAQTGSGKTAAFAIPI 132
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LQAL +FA VL+PTRELA QI + F+ALGSG+ LR +VGG+DMM+Q
Sbjct: 133 LQALWYAQT------PYFATVLAPTRELAYQIKDTFDALGSGMGLRSVCIVGGMDMMEQA 186
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L ++PH++VATPGRLMDHL + KGFSL LK+LV+DEADRLL+ +F LD+I VIP
Sbjct: 187 RDLMRKPHVIVATPGRLMDHLEHLKGFSLRALKFLVMDEADRLLDMEFGPVLDKIFKVIP 246
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R R TYLFSATMT K+ KLQRA L NPVK+ + +YSTVDTL Q VP K+ YL+Y
Sbjct: 247 RERTTYLFSATMTNKIDKLQRASLTNPVKVSVSDRYSTVDTLIQSMMIVPDGQKNTYLIY 306
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L + S ++FTRTC ++ AL+ R LG A+P+ G ++QS+RL ALN+FK+G+ NI
Sbjct: 307 LLNQFEGKSIIIFTRTCAHSQRTALLSRILGFSAVPLHGQLTQSQRLSALNRFKSGKTNI 366
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G ++SLV QY+LE +
Sbjct: 367 LVATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGRSGKSVSLVTQYDLELLI 426
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
+IE +I KLP+ +E+L L + V +A
Sbjct: 427 RIEAIINMKLPKESVNRDEILSLHDYVDKA 456
>gi|254565677|ref|XP_002489949.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|238029745|emb|CAY67668.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|328350360|emb|CCA36760.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 478
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/407 (55%), Positives = 302/407 (74%), Gaps = 6/407 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E++ ++F + GL E++EACE + + P+ IQAE+IP+AL+G+D+IGLAQTGSGKT AFA
Sbjct: 68 EQKYESFNDFGLVPEILEACEKLKYTKPTPIQAESIPYALKGRDIIGLAQTGSGKTAAFA 127
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+P+LQ+L E A FF CVL+PTRELA QI E F++LGSG+ LR +VGG+DM+
Sbjct: 128 IPVLQSLYEQAT------PFFCCVLAPTRELAYQIKETFDSLGSGMGLRSVCIVGGMDMI 181
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PH++VATPGRLMDHL NTKGFSL LKYL++DEADRLL+ +F ++D++L
Sbjct: 182 DQAKDLMRKPHVIVATPGRLMDHLENTKGFSLKALKYLIMDEADRLLDLEFGPAIDKVLK 241
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+IPR R TYLFSATMT K++KLQRA L +P+K+ +SKYSTVD+L Q VP YK+ +
Sbjct: 242 LIPRERSTYLFSATMTNKIEKLQRASLVDPIKVSVSSKYSTVDSLIQSLMVVPDGYKNTF 301
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+Y+L + S ++FTRTC + AL+ R + AIP+ G ++QS+RLGALNKFKA E
Sbjct: 302 LIYLLNKYQNKSIIIFTRTCAHAQRTALLARLMDFSAIPLHGQLNQSQRLGALNKFKARE 361
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVA+RGLDIP VD+VIN+DIPT+SK YIHRVGRTARAGR+G +ISLV QY+LE
Sbjct: 362 RTILVATDVAARGLDIPMVDVVINFDIPTDSKAYIHRVGRTARAGRSGRSISLVTQYDLE 421
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
L++E ++G KLP+ +E+L L V + + IK+ N+
Sbjct: 422 LILRVESVLGMKLPKDVPPRDEILSLHNTVEKFHNEAVRQIKEHQNR 468
>gi|344303537|gb|EGW33786.1| ATP-dependent rRNA helicase RRP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 475
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/423 (55%), Positives = 301/423 (71%), Gaps = 11/423 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + K+F EL L EL+E+ +++ + P+ IQ+EAIPHALEG D+IGLAQTGSGKT AF
Sbjct: 58 EELKFKSFSELKLVPELLESIQSMKFTKPTPIQSEAIPHALEGHDIIGLAQTGSGKTAAF 117
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PILQAL E +FA VL+PTRELA QI E F+ALGS + LR +VGG+DM
Sbjct: 118 AIPILQALWEAQS------PYFALVLAPTRELAFQIKETFDALGSTMGLRSVCIVGGMDM 171
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PH++VATPGR+MDHL TKGF L LKYLV+DEADRLL+ DF +LD IL
Sbjct: 172 MDQARDLMRKPHVIVATPGRIMDHLETTKGFKLKDLKYLVMDEADRLLDMDFGPALDRIL 231
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T D L Q V YK+
Sbjct: 232 KVIPTKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVHDGYKNT 291
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
L+++L+E +VFTRT + AL+ R LG A+P+ G +SQ++RLG+LNKFK+
Sbjct: 292 ILIHLLSEYEGKLIIVFTRTVAHAQRTALLCRILGFNAVPLHGQLSQAQRLGSLNKFKSR 351
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+L
Sbjct: 352 SANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDL 411
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLL----ERVT-EAKRISQMTIKDSGNKRRRKGGD 417
E YL+IE ++GKKLP+ +EVL L +R T EA R ++ + G +R R D
Sbjct: 412 EMYLRIESVLGKKLPKEDMPPKEVLDALHPNVDRATAEAIRQTKELHEKRGKRRNRDDAD 471
Query: 418 EDD 420
++
Sbjct: 472 REE 474
>gi|307214659|gb|EFN89598.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 377
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/383 (60%), Positives = 293/383 (76%), Gaps = 17/383 (4%)
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+LQALLE QR +FA VL+PTRELA QISEQFEALGS I ++CAVLVGG+DM Q
Sbjct: 1 MLQALLE--NPQR----YFALVLTPTRELAFQISEQFEALGSSIGVKCAVLVGGMDMSAQ 54
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L L K+PHI++ TPGRL+D+L NTKGFSL LK+LV+ EADR+LN DFE +D+IL VI
Sbjct: 55 ALLLSKKPHIIITTPGRLVDYLENTKGFSLQNLKFLVMGEADRILNMDFEIEVDKILRVI 114
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
PR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YLV
Sbjct: 115 PRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLV 174
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+IL E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFKA +
Sbjct: 175 HILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKARNRS 234
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y
Sbjct: 235 ILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELY 294
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGNKRRRKGGDEDD 420
+IE+LI K+LP +P EE EV+LL ERVTEA+RI +M +KD KR+++ GD +D
Sbjct: 295 QRIEQLISKQLPLWPTEEGEVMLLQERVTEAQRIVKMEVKDIEENKKLGKRKKRAGDNED 354
Query: 421 DIGRQFGI------NKKKLSKRK 437
D + G+ N KK+ KR+
Sbjct: 355 DTEQSIGVRKRIKGNGKKMGKRR 377
>gi|393245773|gb|EJD53283.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 463
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/404 (56%), Positives = 300/404 (74%), Gaps = 6/404 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+ +FKELGL + L+EA + + + P++IQA A+PHAL G D+IG+A+TGSGKT AF
Sbjct: 20 EEETRPSFKELGLIEPLLEALDKLSFARPTEIQAAALPHALAGHDIIGVAETGSGKTAAF 79
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ L E + R + FAC ++PTRELA QI++ FEALG + +R AV++GGV
Sbjct: 80 ALPILQKLWE---DPRPL---FACCIAPTRELAFQIAQSFEALGGSLGVRVAVIIGGVKE 133
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
++Q +AL KRPHI+VA PGRL HL NTKGFSL TLKYLVLDEADRLL+ DF K +D++L
Sbjct: 134 IEQQIALSKRPHIIVAAPGRLNWHLENTKGFSLRTLKYLVLDEADRLLDLDFGKDIDKLL 193
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
V+P+ R TYLFSATMT KV+KLQRA L NP ++ +SKYSTV TL Q Y VP K+
Sbjct: 194 KVLPKERHTYLFSATMTDKVEKLQRASLSNPKRVAVSSKYSTVSTLLQYYLLVPLPQKEV 253
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
L+Y+ ++ S ++FTRT + ++++LR LG A+P+ G +SQS RLGAL KFKAG
Sbjct: 254 NLIYLCNSLAEKSIIIFTRTQHDAQRVSIILRTLGFSAVPLHGALSQSARLGALAKFKAG 313
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
IL+ TDVASRGLDIP VD+VINYD+PTNSKDYIHRVGRTARAGR G +++ V QY++
Sbjct: 314 GRKILVATDVASRGLDIPHVDIVINYDVPTNSKDYIHRVGRTARAGRAGKSVTFVTQYDV 373
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
E + + E +IGK++ +P E+ EV +L +RV EA R++ ++D
Sbjct: 374 EVFKRTEAVIGKEMDAWPVEKAEVEVLRQRVEEAARLAAKELRD 417
>gi|219123243|ref|XP_002181938.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406539|gb|EEC46478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 433
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/399 (54%), Positives = 299/399 (74%), Gaps = 5/399 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
++FK LG + L EAC+ + WKT ++IQA +P A EG+D+IGLA+TGSGKTGAF LPIL
Sbjct: 39 QSFKSLGACETLQEACDRLEWKTATRIQASVLPEAFEGRDIIGLAETGSGKTGAFCLPIL 98
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q LL ++ V A +L+PTRELA QI + + LG + +VGGVD Q +
Sbjct: 99 QGLL-----RKPVKGTAALILTPTRELAFQILQVVQGLGQAMGATAVCVVGGVDRTSQAI 153
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALG+ PH+V+ATPGRL+DHL +TKGF+L ++YLVLDEADR+L+ DFE+ L +IL+ +P
Sbjct: 154 ALGRNPHVVIATPGRLLDHLKDTKGFNLNKVRYLVLDEADRMLSMDFEEELHQILDNMPE 213
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT LFSATMT +V KL+RA LK+PVK++ ++K+ T L Q Y F+PAKYKDCYL Y+
Sbjct: 214 QRQTLLFSATMTTQVAKLERASLKDPVKVQVSTKFQTPKQLLQSYLFIPAKYKDCYLTYL 273
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ E + S +VF TC+ + LALMLRNLG A+ + G M QSKRLGAL KF +G+ IL
Sbjct: 274 INEHAGQSILVFGATCNNVQRLALMLRNLGFPAVCLHGQMDQSKRLGALQKFSSGDRTIL 333
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+CTDVASRGLD+P VD+VIN+D+P + K+YIHRVGRTARAG++G AI++V QY++E Y +
Sbjct: 334 LCTDVASRGLDLPQVDLVINFDLPGHGKEYIHRVGRTARAGKSGRAIAMVTQYDVEVYQR 393
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+E L+GKKL E+ +E+ VL+LLERV++A+R++ +K+
Sbjct: 394 LEALLGKKLDEWKTDEKTVLVLLERVSDAQRMATRELKE 432
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/402 (58%), Positives = 301/402 (74%), Gaps = 8/402 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F L L L+ + ++ W P++IQA +IP ALEG+D+IGLA+TGSGKTG+FA+PIL
Sbjct: 39 KSFSSLNLHPSLLSSIASLQWTNPTQIQAASIPPALEGRDVIGLAETGSGKTGSFAIPIL 98
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
LLE + Q FA +L+PTRELA QI E ALG G+ +VGGVDM Q +
Sbjct: 99 NYLLEKPQKQ-----VFAVILAPTRELAFQIHEVMVALGRGMGANSVCVVGGVDMASQAI 153
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP- 186
AL + PH+VVATPGRL+DHL NTKGF L +KYLV+DEADR+L+ DFEK ++EIL VIP
Sbjct: 154 ALARNPHVVVATPGRLLDHLQNTKGFHLRQIKYLVMDEADRMLSMDFEKEINEILEVIPD 213
Query: 187 --RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+ R+T LFSATMT KV+KLQRA L +PV++E ++K+ T L Q Y F+PAKYKDCYL
Sbjct: 214 CEKGRRTMLFSATMTSKVEKLQRASLVDPVRVEVSTKFQTPKKLLQNYLFIPAKYKDCYL 273
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
Y++ E + S +VF TC+ + LALMLRNLG AI + G MSQ KRLGAL KFK+G
Sbjct: 274 TYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAICLHGQMSQPKRLGALTKFKSGGR 333
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+ILICTDVASRGLDIPSVD+VIN+D+P + KDYIHRVGRTARAGR+G AI++V QY++E
Sbjct: 334 DILICTDVASRGLDIPSVDVVINFDLPGHGKDYIHRVGRTARAGRSGKAIAMVTQYDVEV 393
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
Y ++E L+G +LPE+ EEEVLLLLERV +A+R++ +K+
Sbjct: 394 YQRLEHLLGHRLPEYKLAEEEVLLLLERVNDAQRLATRELKE 435
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/384 (58%), Positives = 283/384 (73%), Gaps = 6/384 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + TF EL L +L+EA + + + P+ IQ+EAIPHALEGKD+IGLA TGSGKT AFA
Sbjct: 64 ELKFNTFAELNLVPDLLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFA 123
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQAL +F VL+PTRELA QI + F+ALG+ + LR +VGG+DMM
Sbjct: 124 IPILQALWHAQT------PYFGLVLAPTRELAFQIKDTFDALGTTMGLRSVCIVGGMDMM 177
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHIVVATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 178 DQARDLMRKPHIVVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 237
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K++KLQRA L NPV++ ++KY T D L Q V YK+
Sbjct: 238 VIPPKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSTKYQTADNLVQSMMLVNDGYKNTI 297
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRT + AL+ R LG A+P+ G +SQ++RLG+LNKFK+G+
Sbjct: 298 LIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQAQRLGSLNKFKSGK 357
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+LE
Sbjct: 358 ANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLE 417
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVL 387
YL+IE +GKKLP+ +EVL
Sbjct: 418 MYLRIENALGKKLPKEDKPSKEVL 441
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/399 (54%), Positives = 297/399 (74%), Gaps = 4/399 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LG+ EL +AC+ + W+ PSKIQ E IP+AL+G+DLI LA+TGSGKTGAFA+PI+Q
Sbjct: 30 TFESLGVCPELCKACDVLQWEHPSKIQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQ 89
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ A ++++ +ACVL+PTREL +QI +QFE LG+ I+L A +VGG+DM+ Q +A
Sbjct: 90 KLLDAAPHRKST---WACVLAPTRELCVQIGQQFEGLGASINLTTATIVGGLDMVTQAMA 146
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VA+PGRL+DHL NTKGF L T+K+LV+DEADRLL DFE +L++I+ PR
Sbjct: 147 LSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPRD 206
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT+LFSATMT KV +LQRA L PVK E A K+ L Q Y FVP K+K YL +L
Sbjct: 207 RQTFLFSATMTNKVSQLQRASLTRPVKCEVARKFDVAKGLVQNYMFVPHKHKHAYLAALL 266
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S+ M+F TC + +A LR+LG + + G M+Q+ RLGALN+F+AG ++L+
Sbjct: 267 AHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCLHGKMTQTHRLGALNQFRAGTRSVLV 326
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDIPSVD+VIN+D+P N ++YIHRVGRTARAGRTG +++LV QY++E + +I
Sbjct: 327 ATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTARAGRTGRSVTLVTQYDIEPFQRI 386
Query: 369 EKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKD 406
E GKK+ EFP +EE + L E+V EA R +Q+ +++
Sbjct: 387 ENKQGKKMEEFPEVKEENAMSLQEKVLEALRSTQLEMRE 425
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/384 (57%), Positives = 282/384 (73%), Gaps = 6/384 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + TF EL L +L+EA + + + P+ IQ+EAIPHALEGKD+IGLA TGSGKT AFA
Sbjct: 67 ELKFNTFAELNLVPDLLEAIQQMNFAKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFA 126
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQAL +F VL+PTRELA QI + F+ALG+ + LR +VGG+DMM
Sbjct: 127 IPILQALWHAQT------PYFGLVLAPTRELAFQIKDTFDALGATMGLRSVCIVGGMDMM 180
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 181 DQARDLMRKPHIIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 240
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K++KLQRA L NPV++ ++KY T D L Q V YK+
Sbjct: 241 VIPPKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSTKYQTADNLVQSMMLVNDGYKNTI 300
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRT + AL+ R LG A+P+ G +SQ++RLG+LNKFK+ +
Sbjct: 301 LIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQAQRLGSLNKFKSSK 360
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+LE
Sbjct: 361 ANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLE 420
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVL 387
YL+IE +GKKLP+ +EVL
Sbjct: 421 MYLRIENALGKKLPKEEKPSKEVL 444
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/399 (54%), Positives = 296/399 (74%), Gaps = 4/399 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LG+ EL +AC+ + W+ PSKIQ E IP+AL+G+DLI LA+TGSGKTGAFA+PI+Q
Sbjct: 30 TFESLGVCPELCKACDVLQWEHPSKIQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQ 89
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ A +++ +ACVL+PTREL +QI +QFE LG+ I+L A +VGG+DM+ Q ++
Sbjct: 90 KLLDAAPHRKLT---WACVLAPTRELCVQIGQQFEGLGASINLTTATIVGGLDMVTQAMS 146
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VA+PGRL+DHL NTKGF L T+K+LV+DEADRLL DFE +L++I+ PR
Sbjct: 147 LSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPRD 206
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT+LFSATMT KV +LQRA L PVK E A K+ L Q Y FVP K+K YL +L
Sbjct: 207 RQTFLFSATMTNKVSQLQRASLTRPVKCEVARKFDVAKGLVQNYMFVPHKHKHAYLAALL 266
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S+ M+F TC + +A LR+LG + + G M+Q+ RLGALN+F+AG ++L+
Sbjct: 267 AHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCLHGKMTQTHRLGALNQFRAGTRSVLV 326
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDIPSVD+VIN+D+P N ++YIHRVGRTARAGRTG +++LV QY++E + +I
Sbjct: 327 ATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRTARAGRTGRSVTLVTQYDIEPFQRI 386
Query: 369 EKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKD 406
E GKK+ EFP +EE + L E+V EA R +Q+ +++
Sbjct: 387 ENKQGKKMEEFPEVKEENAISLQEKVLEALRSTQLEMRE 425
>gi|324513918|gb|ADY45697.1| ATP-dependent RNA helicase [Ascaris suum]
Length = 435
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/352 (61%), Positives = 277/352 (78%), Gaps = 6/352 (1%)
Query: 55 GSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCA 114
GSGKT AFALPILQALL+ + FA +L+PTRELA QI+EQF+ALG+ I L A
Sbjct: 37 GSGKTAAFALPILQALLDTPQK------LFALILTPTRELAFQIAEQFDALGASIGLLVA 90
Query: 115 VLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDF 174
V+VGGVDM+ Q LAL KRPH++VATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DF
Sbjct: 91 VIVGGVDMVTQALALAKRPHVIVATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDF 150
Query: 175 EKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRF 234
E LD+IL V+P+ R+TYL+SATMTKKV KL+RA L++P ++E SKY TVD LKQ Y F
Sbjct: 151 EVELDKILKVLPKERRTYLYSATMTKKVAKLERASLRDPARVEVCSKYKTVDKLKQHYIF 210
Query: 235 VPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
+P KYK+ YLVYIL E++ + +VF TC +T ALMLR LG A+P+ G MSQ+KRLG
Sbjct: 211 IPQKYKEAYLVYILNEMAGQTAIVFCATCASTMKTALMLRQLGFGAVPLHGQMSQAKRLG 270
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
+LNKFK+ IL+CTDVASRGLDIP+VD V+NYD+P+ SKDY+HRVGRTARAGR+GV+I
Sbjct: 271 SLNKFKSKVRPILVCTDVASRGLDIPNVDAVLNYDVPSQSKDYVHRVGRTARAGRSGVSI 330
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+ V QY++E Y +IE LIGKKLP + E +V+LL+ERV EA + ++ +K+
Sbjct: 331 TFVTQYDVEVYQRIEHLIGKKLPLYETVENDVMLLVERVEEAMKAAKQELKE 382
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/421 (54%), Positives = 297/421 (70%), Gaps = 9/421 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E + TF EL L EL+EA + + + P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 66 DEVKFSTFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAF 125
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PILQ+L E +F VL+P RELA QI E F+ALGS + +R LVGG+DM
Sbjct: 126 AIPILQSLWEAQT------PYFGLVLAPARELAYQIKETFDALGSTMGVRTVCLVGGMDM 179
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGR+MDHL +TKGFSL LKY V+DEAD+LL+ +F LD+IL
Sbjct: 180 MDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKIL 239
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
IP R TYLFSATMT K++KLQRA L NPV++ +SKY T D L Q V YK+
Sbjct: 240 KQIPSKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLIQSMMLVSDGYKNT 299
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+++L E S ++F RT T+ +++ R LG A+P+ G ++Q++RLG+LNKFK+G
Sbjct: 300 YLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPLHGDLTQAQRLGSLNKFKSG 359
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
NILI TDVA+RGLDIPSVD+VINYDIPT+SK Y+HRVGRTARAGR+G +ISLV QY+L
Sbjct: 360 TANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRTARAGRSGKSISLVTQYDL 419
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE---AKRISQMTIKDSGNKRRRKGGDED 419
E YL+IE+ I KKLP+ P+ + +L L + A+ I Q +R R+G D+
Sbjct: 420 EMYLRIEQSIQKKLPKDPSPPKAMLDALHVHVDRAYAEAIRQTKEFHEKTRRGRRGKDDK 479
Query: 420 D 420
D
Sbjct: 480 D 480
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/383 (59%), Positives = 285/383 (74%), Gaps = 6/383 (1%)
Query: 17 DELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAEN 76
D+L E E + + P+ IQ +IP AL GKDLIGLA+TGSGKT AFALPILQAL +
Sbjct: 111 DQLCETLEILKFHKPTPIQQASIPLALAGKDLIGLAETGSGKTAAFALPILQALYHSPHS 170
Query: 77 QRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIV 136
FAC+L+PTRELA QISEQ EA+G + ++ V+VGG+DMM Q +AL KRPHI+
Sbjct: 171 -----TLFACILAPTRELAFQISEQTEAIGGSLGVKTCVIVGGMDMMPQAIALSKRPHII 225
Query: 137 VATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSA 196
VATPGRL+DHL NTKGFSL ++KYLV+DEADRLL+ DF +++IL V+P R TYLFSA
Sbjct: 226 VATPGRLLDHLENTKGFSLRSIKYLVMDEADRLLDLDFGPIIEKILKVLPPQRNTYLFSA 285
Query: 197 TMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASST 256
TMT KV++LQR L NPV++ +SKY TV +L Q + +P K KD YLVY++ E A T
Sbjct: 286 TMTDKVERLQRMSLTNPVRVAVSSKYQTVKSLLQYFMLIPQKDKDTYLVYLVAEKFAGKT 345
Query: 257 M-VFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASR 315
M +FTRT T+ ++++LR LG AIP+ G +SQ+ RLGALNKFKAG NIL+ TDVA+R
Sbjct: 346 MIIFTRTIMDTQRISVLLRLLGCSAIPLHGQLSQTGRLGALNKFKAGARNILVATDVAAR 405
Query: 316 GLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKK 375
GLDIP+VD VINYDI +SK YIHRVGRTARAGR+GV ++LV QY++E + +IEK +GKK
Sbjct: 406 GLDIPTVDYVINYDIAGDSKTYIHRVGRTARAGRSGVCVNLVTQYDIEEFTRIEKALGKK 465
Query: 376 LPEFPAEEEEVLLLLERVTEAKR 398
L E+ EV LL E V EA+R
Sbjct: 466 LDALEVEKGEVSLLAESVGEAQR 488
>gi|429327957|gb|AFZ79717.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 457
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/414 (54%), Positives = 298/414 (71%), Gaps = 7/414 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE++ +F++LG+ EL AC +GWK+P+ IQ EAIP ALEGKD+IGLA+TGSGKT AF
Sbjct: 35 EEQDGPSFEDLGICSELCNACRELGWKSPTNIQIEAIPPALEGKDVIGLAETGSGKTAAF 94
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+PILQ+LL+ + QR +A VL+PTREL +QI+EQF+ALGS I+L +++GG+DM
Sbjct: 95 TIPILQSLLD--KPQR----LYALVLAPTRELCVQITEQFKALGSSIALDVCMILGGLDM 148
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L L KRPHI+V +PGRL DHL NTKGFS+ T+K+LVLDEADRLL+ DF+ +LD+IL
Sbjct: 149 VSQALQLSKRPHIIVGSPGRLADHLENTKGFSIETMKFLVLDEADRLLSMDFDDALDKIL 208
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
N +P+ R+T+LFSATMT KV KLQ+ L PVKI +KYST L Q+Y +P K+K
Sbjct: 209 NALPKERRTFLFSATMTSKVAKLQKVSLIKPVKIHVNTKYSTSQLLVQKYLLIPLKFKWT 268
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL +L + M+F TC + L LRNL +I + G +SQ +RLGALN FK+G
Sbjct: 269 YLAALLMHFGGYTAMIFCNTCLGAQKCCLYLRNLQITSICLHGKLSQMQRLGALNGFKSG 328
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
++ TDV SRGLDIPSVD+VIN+DIP +SKDYIHRVGRTARAGRTG AI++V QY++
Sbjct: 329 SYRTMVVTDVGSRGLDIPSVDLVINFDIPQSSKDYIHRVGRTARAGRTGTAITVVTQYDI 388
Query: 363 EWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
E + +IE +GKKL EF E+ L E ++A R ++ KD+ N +RKG
Sbjct: 389 EPFQRIEFALGKKLEEFVDITEDAALSKHEDYSQALRTAESESKDTANIFKRKG 442
>gi|68473005|ref|XP_719308.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|46441121|gb|EAL00420.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|238880344|gb|EEQ43982.1| ATP-dependent rRNA helicase RRP3 [Candida albicans WO-1]
Length = 399
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/360 (60%), Positives = 273/360 (75%), Gaps = 6/360 (1%)
Query: 28 WKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACV 87
+ P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AFA+PILQ+L + +FA V
Sbjct: 3 FTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQ------PYFALV 56
Query: 88 LSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL 147
L+PTRELA QI + F+ALGS + LR + +VGG+DMM Q L ++PH++VATPGR+MDHL
Sbjct: 57 LAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHL 116
Query: 148 TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQR 207
+TKGFSL LKYLV+DEADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQR
Sbjct: 117 EHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQR 176
Query: 208 ACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR 267
A L NPV++ +SKY T D L Q V YK+ L+++L E S +VFTRT +
Sbjct: 177 ASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQ 236
Query: 268 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 327
AL+ R LG A+P+ G +SQS+RLG+LNKFK+ + NIL+ TDVA+RGLDIPSVD+VIN
Sbjct: 237 RTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVIN 296
Query: 328 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 387
YDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+LE YL+IE ++GKKLP+ +EVL
Sbjct: 297 YDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIESVLGKKLPKEDKPPKEVL 356
>gi|242084812|ref|XP_002442831.1| hypothetical protein SORBIDRAFT_08g003560 [Sorghum bicolor]
gi|241943524|gb|EES16669.1| hypothetical protein SORBIDRAFT_08g003560 [Sorghum bicolor]
Length = 531
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/377 (61%), Positives = 289/377 (76%), Gaps = 22/377 (5%)
Query: 44 EGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 103
EG DLI LAQTGSGKT AFALPILQALLE ++R FFACVLSPTRELAIQI+EQFE
Sbjct: 153 EGMDLIALAQTGSGKTAAFALPILQALLE---HRR---PFFACVLSPTRELAIQIAEQFE 206
Query: 104 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 163
ALGS I L C+VLVGGVD MQQ ++L + PHI+VATPGRL+DHLT+TKGFSL +KYLVL
Sbjct: 207 ALGSAIGLVCSVLVGGVDRMQQVISLARHPHIIVATPGRLLDHLTDTKGFSLNKIKYLVL 266
Query: 164 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 223
DEAD LL+ +FEKSL++IL VIP+ R+T+LFSATMT K+K + KYS
Sbjct: 267 DEADVLLDMEFEKSLNDILKVIPKERRTFLFSATMTDKLK--------------VSCKYS 312
Query: 224 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 283
TVDTL++++ VPA KDC LVY+L ++ S M+FT TC ++RLLALMLRNLG AI I
Sbjct: 313 TVDTLREEFYLVPANDKDCCLVYVLNKIPGSMIMIFTETCYSSRLLALMLRNLGFEAIFI 372
Query: 284 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 343
+G MSQ KRLGALN+FK+ CNI+ CTDVASRGLDI VD+VINYDIP+ K Y+HRVGR
Sbjct: 373 NGKMSQDKRLGALNRFKSKGCNIITCTDVASRGLDIQGVDVVINYDIPS-LKSYVHRVGR 431
Query: 344 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 403
TARAG++G A+SLVNQYE+ + IEKL+GK++ + +E E+ +L E V ++KRI+ +
Sbjct: 432 TARAGQSGYALSLVNQYEVLRFKYIEKLLGKEISKSEVDECELKILKECVCDSKRIA-LK 490
Query: 404 IKDSGNKRRRKGGDEDD 420
+K G KR R D++D
Sbjct: 491 VKGDGCKRPRSMQDDED 507
>gi|198413643|ref|XP_002129533.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 2 [Ciona intestinalis]
Length = 401
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/432 (54%), Positives = 291/432 (67%), Gaps = 55/432 (12%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A + V TF+ LG+ D L E C+ +GWK PSKIQ EAIP AL+G D+IGLA+TGSGKTGA
Sbjct: 14 ASTEAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDVIGLAETGSGKTGA 73
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
F +P+LQALLE QR FA VL+PTRELA QI EQF+ALGS I ++ V+VGGVD
Sbjct: 74 FCIPVLQALLE--NPQR----LFALVLTPTRELAFQIEEQFKALGSAIGIKTCVVVGGVD 127
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
MM Q + L K+PH+VVATPGRL+DHL TKGF+L ++K+LVLDEADR+LN DFE LD I
Sbjct: 128 MMGQQIILAKKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDFESELDTI 187
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMT KVKKLQRA L PVK +KY TVD L Q Y F+P+K KD
Sbjct: 188 LKVIPRERRTFLFSATMTGKVKKLQRAALTKPVKCAVNNKYHTVDKLFQYYLFLPSKDKD 247
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
SKRLGALNKFK+
Sbjct: 248 ------------------------------------------------SKRLGALNKFKS 259
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+VIN D+P SKDYIHRVGRTARAGR G +++ V QY+
Sbjct: 260 ATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRTARAGRFGKSVTFVTQYD 319
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
+E Y +IE+LIGKKLPE+ E EV +L ERV EA+R++++ +K+ G+K+R + ++
Sbjct: 320 VELYQRIEELIGKKLPEYEMEHNEVKVLQERVAEAQRLARLEMKERGSKKRGAVASDSEE 379
Query: 422 IGRQFGINKKKL 433
+ Q I K K+
Sbjct: 380 LADQ-NIGKHKI 390
>gi|340505836|gb|EGR32122.1| hypothetical protein IMG5_095370 [Ichthyophthirius multifiliis]
Length = 540
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/401 (53%), Positives = 283/401 (70%), Gaps = 22/401 (5%)
Query: 22 ACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP 81
AC+ + + TP+ IQ +++PH L+ KD+I LA+TGSGKT +FALPILQ L
Sbjct: 137 ACQRLNYITPTPIQQKSLPHTLKKKDIIALAETGSGKTLSFALPILQQFLNQPH------ 190
Query: 82 AFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHI------ 135
++A +LSPTREL +QISE FE LG L+ V+VGG+D ++Q +AL K PHI
Sbjct: 191 EYYALILSPTRELCVQISESFENLGKEFGLKVVVIVGGLDPIKQMIALSKNPHISIYYNI 250
Query: 136 ----------VVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
VV TPGR+ H NTKGF + LK+LVLDEAD+LLN DFE +++IL+ I
Sbjct: 251 IYIYIYLYILVVGTPGRIQYHFQNTKGFQMNNLKFLVLDEADKLLNMDFEAEINDILDKI 310
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T+LFSATMT KV KLQ+ L+NPVKIE ++KY TV TL QQY F+P KYKD YL
Sbjct: 311 PKERNTFLFSATMTNKVHKLQKVSLRNPVKIEVSTKYQTVQTLIQQYCFIPIKYKDSYLA 370
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+IL E SS ++F TC + L LMLRNLG +A+ I G M+Q+KR A+NKFK G+
Sbjct: 371 FILNENQGSSCIIFVTTCINSIRLTLMLRNLGFQAVSIHGQMNQTKRQTAINKFKDGQKK 430
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVASRGLDIP +D+VINY++P N+K+YIHRVGRTARAGR G AISL++QY+LE +
Sbjct: 431 ILVATDVASRGLDIPCIDLVINYELPANTKEYIHRVGRTARAGRKGNAISLISQYDLEAF 490
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
L+IE L+G K+ ++ EE + L+ ER+ EA++IS +K+
Sbjct: 491 LKIEDLLGIKIDQYNIEEYKALVFNERINEAQKISTKQLKE 531
>gi|209877961|ref|XP_002140422.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556028|gb|EEA06073.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 442
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/408 (53%), Positives = 299/408 (73%), Gaps = 7/408 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LG+ EL ACE++GW P+ IQ EAIP AL G D+IGLA+TGSGKTGAF LPILQ
Sbjct: 30 TFASLGVCKELCLACESLGWLKPTDIQREAIPIALRGGDIIGLAETGSGKTGAFILPILQ 89
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+LLE NQ + ++ VL+PTREL +QISEQF ALGS ISL+ A +VGG+DM+ Q L+
Sbjct: 90 SLLE---NQSRM---YSVVLAPTRELCVQISEQFSALGSLISLQVANIVGGMDMVNQALS 143
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VA+PGRL+DHL NTKGF++ ++KYLV+DEADRLL+ DFE +L +I+ P+
Sbjct: 144 LAKKPHIIVASPGRLVDHLENTKGFNISSVKYLVMDEADRLLSMDFEIALTKIIEACPKN 203
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQR LKNPVKI +KY T + L Q Y F+P K+K YLV ++
Sbjct: 204 RNTYLFSATMTTKVAKLQRVSLKNPVKICVNTKYDTAENLLQYYMFIPFKFKWSYLVILV 263
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+S + ++FT TC + + AL+++ LG ++ + G M+Q++RL ALN+FK+ + ++L
Sbjct: 264 QNLSQYTGIIFTNTCISCKRGALLMQQLGFSSVCLHGRMNQTQRLAALNQFKSKQRHLLF 323
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
T+V SRGLDIP VD VIN+DIP +SKDY+HRVGRTARAGR+G AISLV QY++E + ++
Sbjct: 324 TTEVGSRGLDIPHVDFVINFDIPMSSKDYVHRVGRTARAGRSGKAISLVTQYDVEMFQRV 383
Query: 369 EKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
E + KKL E+ +++++ + +V EA RI+ + + +S K G
Sbjct: 384 EFALNKKLDEYSDINKDQMMAIHGKVLEALRITDIELSESNEKSNLVG 431
>gi|157115632|ref|XP_001658272.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108876828|gb|EAT41053.1| AAEL007274-PA [Aedes aegypti]
Length = 442
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/414 (54%), Positives = 290/414 (70%), Gaps = 60/414 (14%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+EEK+ +++++GL D L EAC + WK PSKIQ EAIP AL+GKD+IGLA+TGSGKTGA
Sbjct: 52 SEEKQA-SWEDMGLIDTLCEACRALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKTGA 110
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALLE QR +FA +L+PTRELA QISEQFEALG+ I ++C V+VGG+D
Sbjct: 111 FALPILQALLE--NPQR----YFAVILTPTRELAYQISEQFEALGASIGIKCCVIVGGMD 164
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L ++PHI++ATPGRL+DHL NTKGF+L +KYLV+DEADR+LN DFE L++I
Sbjct: 165 MVSQALHLARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELEKI 224
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKVKKL+RA LK+PVK+E +SKY TV+ L Q Y F+PAKYKD
Sbjct: 225 LKVIPRERRTFLFSATMTKKVKKLERASLKDPVKVEVSSKYQTVEKLLQYYIFIPAKYKD 284
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLV+IL E++ +S M+F TC+ T AL++
Sbjct: 285 VYLVHILNELAGNSFMIFCSTCNNTVRTALIV---------------------------- 316
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
N+DIPT+SKDYIHRVGRTARAGR G A++ V QY+
Sbjct: 317 -------------------------NFDIPTHSKDYIHRVGRTARAGRAGKAVTFVTQYD 351
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+E Y +IE L+GKKLP+F EE+EV+ L ERV EA+R +++ +KD +++ KG
Sbjct: 352 VELYQRIEHLLGKKLPQFKCEEDEVMALQERVGEAQRTARLELKDIDDRKGSKG 405
>gi|261194144|ref|XP_002623477.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
gi|239588491|gb|EEQ71134.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
Length = 465
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/413 (56%), Positives = 307/413 (74%), Gaps = 22/413 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E K+FK+LG+ D L EACE +G+K+P+ IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 51 DEAVTKSFKDLGIIDSLCEACETLGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAF 110
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL+E ++ F +L+PTRELA QIS FEALGS IS+RCAV+VGG+DM
Sbjct: 111 ALPILQALMEKPQS------LFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDM 164
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHIVVATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL
Sbjct: 165 VPQAIALGKKPHIVVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKIL 224
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
V+PR R+TYLFSATM+ KV+ LQRA L + +++ + F+P K
Sbjct: 225 KVLPRERRTYLFSATMSSKVESLQRASLSSGLRLPS---------------FIPTNIKTL 269
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
+ L E + S +VFTRT + T+ LA++LR LG AIP+ G +SQS RLGAL+KF++
Sbjct: 270 PRLS-LNEYAGQSAIVFTRTVNETQRLAILLRALGFGAIPLHGQLSQSSRLGALSKFRSR 328
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGRTARAG++G A ++V QY+L
Sbjct: 329 SRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRTARAGKSGHAFNIVTQYDL 388
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
E +L+IE +GKKL E+ E+EEV++L +RV EA+R + +KD KR +G
Sbjct: 389 EVWLRIENALGKKLEEYKVEKEEVMVLSDRVGEAQRHAITEMKDLHEKRGSRG 441
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/396 (55%), Positives = 282/396 (71%), Gaps = 9/396 (2%)
Query: 28 WKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACV 87
+ P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AFA+PILQ+L E +F V
Sbjct: 3 FSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQT------PYFGLV 56
Query: 88 LSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL 147
L+P RELA QI E F+ALGS + +R LVGG+DMM Q L ++PHI++ATPGR+MDHL
Sbjct: 57 LAPARELAYQIKETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHL 116
Query: 148 TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQR 207
+TKGFSL LKY V+DEAD+LL+ +F LD+IL IP R TYLFSATMT K++KLQR
Sbjct: 117 EHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIPSKRTTYLFSATMTNKIEKLQR 176
Query: 208 ACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR 267
A L NPV++ +SKY T D L Q V YK+ YL+++L E S ++F RT T+
Sbjct: 177 ASLHNPVRVAVSSKYQTADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQ 236
Query: 268 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 327
+++ R LG A+P+ G ++Q++RLG+LNKFK+G NILI TDVA+RGLDIPSVD+VIN
Sbjct: 237 RTSILCRILGFSAVPLHGDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVIN 296
Query: 328 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 387
YDIPT+SK Y+HRVGRTARAGR+G +ISLV QY+LE YL+IE+ I KKLP+ P+ + +L
Sbjct: 297 YDIPTDSKAYVHRVGRTARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAML 356
Query: 388 LLLERVTE---AKRISQMTIKDSGNKRRRKGGDEDD 420
L + A+ I Q +R R+G D+ D
Sbjct: 357 DALHVHVDRAYAEAIRQTKEFHEKTRRGRRGKDDKD 392
>gi|452821215|gb|EME28248.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 404
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/387 (57%), Positives = 300/387 (77%), Gaps = 6/387 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
++ TF++LG+ L E C+NV ++TPSKIQ +AIP+AL G+D+IG+A+TGSGKT AF +
Sbjct: 3 QDTYTFEKLGVCKILCEECKNVNYQTPSKIQIQAIPYALRGRDIIGIAETGSGKTAAFVI 62
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ+LL+ N+ +FA V+SPTRELA QI E FE LG I+LR V+VGGVD++
Sbjct: 63 PILQSLLD--HNK----PYFALVISPTRELAFQIKEHFELLGRSIALRVVVIVGGVDIVS 116
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q A ++PH++VATPGRL+DHL NTKGFSL ++++LVLDEADRLL+ DFEK L++I+
Sbjct: 117 QAAAFARKPHVIVATPGRLVDHLENTKGFSLQSIRFLVLDEADRLLSMDFEKELEKIIAA 176
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ RQ++LFSATMT+KV+KLQR L NPVK++ + KY+TV+TL Q Y F+PAKYKDC+L
Sbjct: 177 LPKERQSFLFSATMTRKVQKLQRVSLTNPVKLQVSEKYATVETLIQNYLFIPAKYKDCFL 236
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
V++ E S T++F T ++T L+L+L+NLG A I G M Q+KRL AL+KFK G+
Sbjct: 237 VFLCQEWSGHPTIIFVDTQNSTLRLSLLLKNLGFGATAIHGGMLQTKRLEALSKFKQGKK 296
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+LI TD+ASRGLDIPSVD+++NYDIP + K YIHRVGRT+RAGRTG AI+LV QY++E
Sbjct: 297 TVLIATDLASRGLDIPSVDLIVNYDIPLHVKAYIHRVGRTSRAGRTGRAINLVTQYDIEA 356
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLE 391
Y ++E+ I KKL +P +E+ V LLE
Sbjct: 357 YQKVEQYIQKKLDAYPCDEDRVFHLLE 383
>gi|323508819|dbj|BAJ77303.1| cgd4_3180 [Cryptosporidium parvum]
gi|323510507|dbj|BAJ78147.1| cgd4_3180 [Cryptosporidium parvum]
Length = 441
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/403 (53%), Positives = 289/403 (71%), Gaps = 7/403 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LG+ EL ACE++GWKTP++IQ + IP ALEG+D+IGLA+TGSGKTG+F +PILQ
Sbjct: 29 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 88
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ VP +A +L+PTREL +QISEQF A GS ISL+ A LVGG+DM+ Q+L+
Sbjct: 89 RLLD-----DQVP-MYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLS 142
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VA+PGRL+DHL NTKGF++G +K+LV+DEADRLL+ DFE +L++I+ PR
Sbjct: 143 LAKKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPRN 202
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQ+ L NP+KI +KY T L Q Y F+P KYK Y + +L
Sbjct: 203 RTTYLFSATMTTKVAKLQKISLSNPIKICVNTKYDTAANLMQYYMFIPFKYKWSYFIGML 262
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + ++F TC R L+ + LG +I + G MSQS+RL ALN FK + +L
Sbjct: 263 QNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLHGRMSQSQRLSALNLFKGKQKRLLF 322
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
T+V SRGLDIP VD VIN+DIPT+SKDY+HRVGRTARAGR+G AIS+V QY++E + +I
Sbjct: 323 TTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRTARAGRSGRAISMVTQYDVETFQRI 382
Query: 369 EKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNK 410
E + +KL E+ + + EEV+ + +V ++ R + DS K
Sbjct: 383 EFALNRKLDEYTSLQREEVMAIHAKVVDSLRTVDAELNDSNEK 425
>gi|66357446|ref|XP_625901.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226956|gb|EAK87922.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
Length = 446
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/403 (53%), Positives = 289/403 (71%), Gaps = 7/403 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LG+ EL ACE++GWKTP++IQ + IP ALEG+D+IGLA+TGSGKTG+F +PILQ
Sbjct: 34 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 93
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ VP +A +L+PTREL +QISEQF A GS ISL+ A LVGG+DM+ Q+L+
Sbjct: 94 RLLD-----DQVP-MYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLS 147
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VA+PGRL+DHL NTKGF++G +K+LV+DEADRLL+ DFE +L++I+ PR
Sbjct: 148 LAKKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPRN 207
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQ+ L NP+KI +KY T L Q Y F+P KYK Y + +L
Sbjct: 208 RTTYLFSATMTTKVAKLQKISLSNPIKICVNTKYDTAANLMQYYMFIPFKYKWSYFIGML 267
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + ++F TC R L+ + LG +I + G MSQS+RL ALN FK + +L
Sbjct: 268 QNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLHGRMSQSQRLSALNLFKGKQKRLLF 327
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
T+V SRGLDIP VD VIN+DIPT+SKDY+HRVGRTARAGR+G AIS+V QY++E + +I
Sbjct: 328 TTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRTARAGRSGRAISMVTQYDVETFQRI 387
Query: 369 EKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNK 410
E + +KL E+ + + EEV+ + +V ++ R + DS K
Sbjct: 388 EFALNRKLDEYTSLQREEVMAIHAKVVDSLRTVDAELNDSNEK 430
>gi|444318027|ref|XP_004179671.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
gi|387512712|emb|CCH60152.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
Length = 506
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/410 (53%), Positives = 294/410 (71%), Gaps = 9/410 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F EL L ELVEAC+N+ ++ P+ IQ+ AIP ALEGKD+IGLAQTGSGKT AFA+PIL
Sbjct: 87 SFSELKLVPELVEACKNLNYEKPTPIQSRAIPPALEGKDIIGLAQTGSGKTAAFAIPILN 146
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + ++AC+++PTRELA QI EQF++LG+ + +R +VGG++MM Q
Sbjct: 147 KLWEDQQ------PYYACIMAPTRELAQQIKEQFDSLGALMGVRSVCIVGGMNMMDQARD 200
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L ++PHI++ATPGRLMDHL NT+GFSL LK+LV+DEADRLL+ +F LD IL ++P
Sbjct: 201 LMRKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDLEFGPVLDRILKILPTQ 260
Query: 189 -RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ YL+Y+
Sbjct: 261 GRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLIQTLMVVPGGLKNTYLIYL 320
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ E S ++FTRT L+L+ L AI + G ++Q++R GAL+ FKAG+ +IL
Sbjct: 321 INEFVGKSIIIFTRTKANAERLSLLSNTLEFDAIALHGDLNQNQRTGALDLFKAGKKSIL 380
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L+
Sbjct: 381 IATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILR 440
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERV--TEAKRISQMTIKDSGNKRRRKG 415
IE ++GKKLP+ + + +L L + V T + I ++ ++ + R KG
Sbjct: 441 IEDVLGKKLPKENVDRDIILSLRDSVEKTNGEVIMELNRRNKEKQLRGKG 490
>gi|67624705|ref|XP_668635.1| DEAD box protein [Cryptosporidium hominis TU502]
gi|54659844|gb|EAL38406.1| DEAD box protein [Cryptosporidium hominis]
Length = 441
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/403 (53%), Positives = 288/403 (71%), Gaps = 7/403 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LG+ EL ACE++GWKTP++IQ + IP ALEG+D+IGLA+TGSGKTG+F +PILQ
Sbjct: 29 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 88
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ VP +A +L+PTREL +QISEQF A GS ISL+ A LVGG+DM+ Q+L+
Sbjct: 89 RLLD-----DQVP-MYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLS 142
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+VA+PGRL+DHL NTKGF++G +K+LV+DEADRLL+ DFE +L++I+ P+
Sbjct: 143 LAKKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPKN 202
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQ+ L NP+KI +KY T L Q Y F+P KYK Y + +L
Sbjct: 203 RTTYLFSATMTTKVAKLQKISLSNPIKICVNTKYDTAANLMQYYMFIPFKYKWSYFIGLL 262
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + ++F TC R L+ + LG +I + G MSQS+RL ALN FK + +L
Sbjct: 263 QNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLHGRMSQSQRLSALNLFKGKQKRLLF 322
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
T+V SRGLDIP VD VIN+DIPT+SKDY+HRVGRTARAGR+G AIS+V QY++E + +I
Sbjct: 323 TTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRTARAGRSGRAISMVTQYDVETFQRI 382
Query: 369 EKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNK 410
E + KKL E+ + + EE + + +V ++ R + DS K
Sbjct: 383 EFALNKKLDEYTSLQREEAMAIHAKVVDSLRTVDAELNDSNEK 425
>gi|323455700|gb|EGB11568.1| hypothetical protein AURANDRAFT_2416, partial [Aureococcus
anophagefferens]
Length = 435
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/402 (54%), Positives = 282/402 (70%), Gaps = 7/402 (1%)
Query: 13 LGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE 72
LGL LV+A +GW P++IQ AIP AL G+D+IGLA+TGSGKTGAF LPIL LLE
Sbjct: 1 LGLHAALVDAVGELGWAKPTRIQKAAIPVALSGRDVIGLAETGSGKTGAFGLPILHKLLE 60
Query: 73 IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKR 132
F L+PTRELA+QI E F+ALG+ I LRC +VGGV++ Q LAL K
Sbjct: 61 KPSR------LFGVALAPTRELAVQIHEVFDALGAAIGLRCVCVVGGVEIAAQALALAKL 114
Query: 133 PHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR-MRQT 191
PH+VVATPGRL+DHL NTKGFSL T K LV+DEADR+L+ DFEK LD I+ IPR R +
Sbjct: 115 PHVVVATPGRLVDHLENTKGFSLRTCKCLVMDEADRMLSMDFEKELDAIVGAIPREGRCS 174
Query: 192 YLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEV 251
LFSATMT KV KLQRA L PVK+ K++ L Q+Y FVPAK+K+CYL +L
Sbjct: 175 MLFSATMTSKVAKLQRASLYKPVKVAVNDKFAMPRQLDQRYLFVPAKHKECYLAAVLDAR 234
Query: 252 SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTD 311
++ +VF TC L+LRNLG A + G M+Q KRLGAL+KFKAG IL+ TD
Sbjct: 235 RGATALVFCATCAGATRATLLLRNLGFDAACLHGQMAQPKRLGALHKFKAGAATILVATD 294
Query: 312 VASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKL 371
VA+RGLDIP+VD+V+NYD+PT+ K+Y+HRVGRTARAGR G AI+ V QY++E Y ++E L
Sbjct: 295 VAARGLDIPAVDLVLNYDVPTHGKEYVHRVGRTARAGRKGSAIAFVTQYDVELYQRLEHL 354
Query: 372 IGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
IG KLP+ +E+ L L+RV +A R++ ++++ R++
Sbjct: 355 IGVKLPKADVDEDMALAFLDRVNDAARLAAGAMRETEEVRKQ 396
>gi|401884069|gb|EJT48246.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 435
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/399 (53%), Positives = 285/399 (71%), Gaps = 30/399 (7%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+ EL E+CE++G+K P+ IQ AIP AL G+D+IG+AQTGS
Sbjct: 24 KTFADLGVSKELCESCESLGFKHPTDIQVAAIPPALTGRDIIGIAQTGS----------- 72
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
A +L+ R + I++Q +ALG+ I +R AV+VGG+DMM Q++
Sbjct: 73 -----------------AVLLAHPR--SDSIAKQVQALGAPIGVRTAVIVGGMDMMSQSI 113
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPHI+VATPGRLMDHL NTKGFSL LKYLVLDEADRLL+ DF +D++L VIP+
Sbjct: 114 ALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLDEADRLLDLDFGPIIDKLLKVIPK 173
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R T+LFSAT++ KV+KL+RA L P++++ SKYSTV TL Q Y F P KD YL Y+
Sbjct: 174 ERNTFLFSATLSTKVEKLKRASLNKPIQVKVDSKYSTVSTLMQYYVFFPEVQKDAYLFYL 233
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ E+S+SS ++FT T D + L++ML LG AIP+ G MSQS RLG+LNKFK+G IL
Sbjct: 234 VNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLHGQMSQSARLGSLNKFKSGGRKIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIPSVD+VIN+DIP+NSKDY+HRVGRTARAGR+G +I+LV QY++
Sbjct: 294 VATDVASRGLDIPSVDLVINFDIPSNSKDYVHRVGRTARAGRSGKSITLVTQYDVVMLKG 353
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
IE IG++LP F ++E V +L +RV EA R +++ +++
Sbjct: 354 IEAAIGRQLPAFDCDKEAVAILSDRVNEAARAARIEMRE 392
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 118 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 177
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 178 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 231
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 232 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 291
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 292 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 351
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 352 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 411
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 412 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 471
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 472 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 506
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/432 (51%), Positives = 299/432 (69%), Gaps = 15/432 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 118 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 177
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 178 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 231
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 232 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 291
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 292 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 351
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 352 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 411
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 412 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 471
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLL--------ERVTEAKRISQMTIKDSGNKRRR 413
LE L+IE+++GKKLP+ ++ +L L E V E R ++ I +R R
Sbjct: 472 LELILRIEEVLGKKLPKESVDKNIILTLRGSVDKANGEVVMEMNRRNKEKIARGKGRRGR 531
Query: 414 KGGDEDDDIGRQ 425
E+ D+G +
Sbjct: 532 MMTRENMDMGER 543
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/395 (54%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHIV+ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIVIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|357490505|ref|XP_003615540.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355516875|gb|AES98498.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 417
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/415 (53%), Positives = 294/415 (70%), Gaps = 8/415 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKD-LIGLAQTGSGKTGAFALP 65
+K+F +LGL +LVEACE + W +P KIQ E IP AL+GKD +IG++ SGK GAF LP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQALLE N T FACVLSP+R+L +I+E F+ LGS ++CA LV D++ Q
Sbjct: 61 ILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQ 117
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFE-KSLDEILNV 184
T + ++PH++V T ++ HL T+GFSL LKYLV+ EAD LLND FE + L++IL++
Sbjct: 118 TNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSI 177
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IP R+T+LFS+TMT+KV +QR L+NP+KI+ +SKYSTV T QQ F+PA KDCYL
Sbjct: 178 IPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYL 237
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
VYILTE++ + VFT+TC + LLAL+L+NL RAIPI +MSQ+K+LGALN FK+G+
Sbjct: 238 VYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKF 297
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NIL+C++ A RGLDIP+VDMVINY+IP + DY+HRVG T G AIS VN YE
Sbjct: 298 NILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQ 354
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDED 419
IE+ GKKLP +PA E VLL V EA+R+++ IK+SG K GDE+
Sbjct: 355 LEMIERHTGKKLPVYPAPCENVLLWRGTVREAERLARKEIKESGWKSGGYLGDEE 409
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 118 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 177
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 178 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 231
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 232 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 291
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 292 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 351
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+G+L+ FKA
Sbjct: 352 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKA 411
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 412 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 471
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 472 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 506
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+G+L+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/432 (51%), Positives = 299/432 (69%), Gaps = 15/432 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDEXFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLL--------ERVTEAKRISQMTIKDSGNKRRR 413
LE L+IE+++GKKLP+ ++ +L L E V E R ++ I +R R
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRXSVDKANGEVVMEMNRRNKEKIARGKGRRGR 489
Query: 414 KGGDEDDDIGRQ 425
E+ D+G +
Sbjct: 490 MMTRENMDMGER 501
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/415 (51%), Positives = 297/415 (71%), Gaps = 13/415 (3%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E KTF ELG+ L++A E + TP++IQ IP A+ G+D+IG+A TGSGKT AF +P
Sbjct: 2 ETKTFAELGICAPLLQALEELKHTTPTEIQTGCIPQAIAGRDIIGIAPTGSGKTLAFVIP 61
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD-MMQ 124
IL L + + +FACVLSPTRELA QIS QFEALG+ + ++ V+VGG D +Q
Sbjct: 62 ILHRLWDNPQ------GYFACVLSPTRELAYQISAQFEALGAAMGVQSVVIVGGDDDRVQ 115
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q + L ++PHI+VATPGRL DHL +TKGFSL +LK+LVLDEADRLL+ DF++ + EI+
Sbjct: 116 QAVRLAQKPHIIVATPGRLHDHLKSTKGFSLRSLKHLVLDEADRLLDLDFQREITEIMQS 175
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYSTVDTLKQQYRFVPAKYKDCY 243
IP+ R TYLFSATMT V KLQRA L +PV+++A+ +Y+TV TL Q Y P K+
Sbjct: 176 IPKERCTYLFSATMTANVSKLQRASLSDPVRVDASLFRYTTVSTLVQHYLLCPLVEKEVT 235
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVY++ + + +VF RT + L+++LR+LG A+P+ G ++QS+RLGA +FK+G+
Sbjct: 236 LVYLINSLVQNLIIVFVRTVADAKRLSIILRSLGFDAVPLHGELTQSQRLGAFTRFKSGK 295
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLD+P+VD+VINYD PT+SKDYIHRVGRTARAGR G +I +V QY+ E
Sbjct: 296 SKILVATDVASRGLDVPNVDVVINYDTPTHSKDYIHRVGRTARAGRAGKSILMVTQYDAE 355
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGNKRRR 413
L++EK++ +KL +P + +E+ LL ERV EA R+++ + + G K+RR
Sbjct: 356 LMLRLEKVLNQKLDLYPTDLQEIALLKERVVEAGRLARNQLNEESKARGGGKKRR 410
>gi|336270890|ref|XP_003350204.1| hypothetical protein SMAC_01096 [Sordaria macrospora k-hell]
gi|380095599|emb|CCC07072.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 507
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/404 (52%), Positives = 290/404 (71%), Gaps = 24/404 (5%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ D L EACE +G+K P+ IQAE+IP AL+ +D+IG+A+TGSGKT AFALPILQALL+
Sbjct: 103 GIVDALCEACERLGYKNPTPIQAESIPLALQNRDIIGIAETGSGKTAAFALPILQALLDK 162
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+ FA VL+PTRELA QI++ FEALGS ISLRCA+++GG+DM+ Q +ALGK+P
Sbjct: 163 PQ------PLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKP 216
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
H++VATPGRL+DHL TKGFSL +++YLV+DEADRLL+ DF L++IL +PR R+T+L
Sbjct: 217 HVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILKFLPRERRTFL 276
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS 252
FSATM+ KV+ LQRA L++P+K+ ++ KY+TV TLK Y F+P +KD YLVY+ +
Sbjct: 277 FSATMSSKVESLQRASLRDPLKVSVSTNKYATVSTLKSNYVFIPHMHKDTYLVYLCNDAL 336
Query: 253 ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDV 312
S C A + R+ RLGALNKF+AG IL+ TDV
Sbjct: 337 PS--------CSAPSAWEPSPSTVVSRS---------PSRLGALNKFRAGSREILVATDV 379
Query: 313 ASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI 372
A+RGLDIP+VD VIN+D+P +SK Y+HRVGRTARAG++G AIS+V QY+LE +L+IE +
Sbjct: 380 AARGLDIPNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIVTQYDLEIWLRIEAAL 439
Query: 373 GKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
G KL E+P E++EV++ RV EA+R ++ +K + + GG
Sbjct: 440 GHKLDEYPLEKDEVMVFKPRVEEAQRHARNEMKSLMENQGKHGG 483
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/430 (51%), Positives = 301/430 (70%), Gaps = 13/430 (3%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
EK +F EL L EL++AC N+ + P+ IQ+++IP ALEG D+IGLAQTGSGKT AFA
Sbjct: 71 EKTFTSFNELDLVPELIQACHNLNFSKPTPIQSKSIPPALEGHDIIGLAQTGSGKTAAFA 130
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PIL L E + ++AC+L+PTRELA QI E F++LGS + +R +VGG++MM
Sbjct: 131 IPILNKLWEDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMM 184
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+ L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 185 DQSRELMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILK 244
Query: 184 VIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+IP R TYLFSATMT K++KLQRA L NPVK ++KY TV+TL Q VP K+
Sbjct: 245 IIPTQDRTTYLFSATMTSKIEKLQRASLTNPVKCAVSNKYQTVETLVQTLMVVPGGLKNT 304
Query: 243 YLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAIPISGHMSQSKRLGALNKFK 300
YL+Y+L E S +VFTRT +A RL AL NL + + + G ++Q++R GAL+ FK
Sbjct: 305 YLIYLLNEFIGKSIIVFTRTKANAERLSAL--SNLLEFSSTALHGDLNQNQRTGALDLFK 362
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG+ IL+ DVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY
Sbjct: 363 AGKRQILVAIDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQY 422
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQMTIKDSGNKRRRKGGDE 418
+LE L+IE ++GKKLP+ ++ +++ + V +A + + +M ++ + R KG +
Sbjct: 423 DLELILRIEDVLGKKLPKENVDKNTIMMFRDSVDKANGEVVMEMNRRNKEKQARGKGTQK 482
Query: 419 DDDIGRQFGI 428
R+ I
Sbjct: 483 SRSRARETWI 492
>gi|366994708|ref|XP_003677118.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
gi|342302986|emb|CCC70763.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
Length = 502
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/416 (52%), Positives = 294/416 (70%), Gaps = 9/416 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E + ++F EL L EL++AC+N+ + P+ IQ+ +IP AL+G D+IGLAQTGSGKT AF
Sbjct: 77 EHETFESFSELDLVPELLQACKNLNYTKPTPIQSRSIPPALKGNDIIGLAQTGSGKTAAF 136
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL +L + ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 137 AIPILNSLWHDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 190
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LKYLV+DEADRLL+ +F LD IL
Sbjct: 191 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDMEFGPVLDRIL 250
Query: 183 NVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
++P R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP KD
Sbjct: 251 KILPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKD 310
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E +T++FTRT ++ + L A + G ++Q++R GAL+ FKA
Sbjct: 311 TYLVYLLNEFIGKTTIIFTRTKANAERISGLCNLLEFNATALHGDLNQNQRTGALDLFKA 370
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 371 GRKSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 430
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQMTIKDSGNKRRRKG 415
LE L+IE+++GKKLP+ ++E +L + V +A + I +M ++ + R KG
Sbjct: 431 LELILRIEEVLGKKLPKESVDKEMILHFRDSVDKANGEVIMEMNRRNKEKQLRGKG 486
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/395 (54%), Positives = 281/395 (71%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E ++F EL L EL+EACEN+ + P+ IQAEAIP ALEGKD+IGLAQTGSGKT AF
Sbjct: 100 EAAHFESFSELNLVPELIEACENLKYSKPTPIQAEAIPPALEGKDIIGLAQTGSGKTAAF 159
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L + ++ACVL+PTRELA QI E F++LG + +R +VGG++M
Sbjct: 160 AIPILNQLWHDQQ------PYYACVLAPTRELAQQIKETFDSLGGAMGVRTTCIVGGMNM 213
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L ++PHI++ATPGRLMDHL NTKGFS+ LK+LV+DEADRLL+ +F LD IL
Sbjct: 214 IDQARDLMRKPHIIIATPGRLMDHLENTKGFSMRKLKFLVMDEADRLLDMEFGPVLDRIL 273
Query: 183 NVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 274 KIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSTKYQTVDTLIQTLMVVPGGLKN 333
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
+L+Y+L E + +VFTRT +A + L A + G ++Q++R GAL+ FKA
Sbjct: 334 TFLIYLLNEFLGKTAIVFTRTKANAERIATLCNLLEFSATALHGDLNQNQRTGALDLFKA 393
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 394 GRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 453
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE ++G+KLP+ ++ +L L + V +A
Sbjct: 454 LELILRIEDVLGRKLPKENVDKGVILSLRDTVDKA 488
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/408 (54%), Positives = 294/408 (72%), Gaps = 13/408 (3%)
Query: 13 LGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE 72
L L EL+EAC+N+ + P+ IQ+ +IP AL+GKD+IGLAQTGSGKT AFA+PIL +L
Sbjct: 79 LNLVPELLEACKNLNYSKPTPIQSRSIPPALKGKDIIGLAQTGSGKTAAFAIPILNSLWH 138
Query: 73 IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKR 132
+ ++AC+LSPTRELA QI E F++LGS + +R +VGG++MM Q L ++
Sbjct: 139 DQQ------PYYACILSPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQARDLMRK 192
Query: 133 PHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP-RMRQT 191
PHI++ TPGRLMDHL NT+GFSL LKYLV+DEADRLL+ +F LD IL +IP + R T
Sbjct: 193 PHIIIGTPGRLMDHLENTRGFSLRNLKYLVMDEADRLLDMEFGPVLDRILKIIPTQGRTT 252
Query: 192 YLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEV 251
YLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP KD YLVY+L E
Sbjct: 253 YLFSATMTSKIDKLQRASLTNPVKCAVSTKYQTVDTLVQTLMVVPGGVKDTYLVYLLNEF 312
Query: 252 SASSTMVFTRT-CDATRLLALMLRNLGQ-RAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S ++FTRT +A R+ L NL Q A + G ++Q++R GAL+ FKAG +IL+
Sbjct: 313 IGKSMIIFTRTKANAERISGLA--NLLQFSATALHGDLNQNQRTGALDLFKAGRRSILVA 370
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L+IE
Sbjct: 371 TDVAARGLDIPSVDVVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIE 430
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQMTIKDSGNKRRRKG 415
+++GKKLP+ +++ VL L + V +A + + +M+ ++ + R KG
Sbjct: 431 EVLGKKLPKENVDKDIVLALRDSVDKANGEVVKEMSRRNKEKQARGKG 478
>gi|406696099|gb|EKC99395.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 436
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/400 (53%), Positives = 285/400 (71%), Gaps = 31/400 (7%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+ EL E+CE++G+K P+ IQ AIP AL G+D+IG+AQTGS
Sbjct: 24 KTFADLGVSKELCESCESLGFKHPTDIQVAAIPPALTGRDIIGIAQTGS----------- 72
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
A +L+ R + I++Q +ALG+ I +R AV+VGG+DMM Q++
Sbjct: 73 -----------------AVLLAHPR--SDSIAKQVQALGAPIGVRTAVIVGGMDMMSQSI 113
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPHI+VATPGRLMDHL NTKGFSL LKYLVLDEADRLL+ DF +D++L VIP+
Sbjct: 114 ALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLDEADRLLDLDFGPIIDKLLKVIPK 173
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R T+LFSAT++ KV+KL+RA L P++++ SKYSTV TL Q Y F P KD YL Y+
Sbjct: 174 ERNTFLFSATLSTKVEKLKRASLNKPIQVKVDSKYSTVSTLMQYYVFFPEVQKDAYLFYL 233
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ E+S+SS ++FT T D + L++ML LG AIP+ G MSQS RLG+LNKFK+G IL
Sbjct: 234 VNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLHGQMSQSARLGSLNKFKSGGRKIL 293
Query: 308 ICTDVASRGLDIPSVDMVI-NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
+ TDVASRGLDIPSVD+VI N+DIP+NSKDY+HRVGRTARAGR+G +I+LV QY++
Sbjct: 294 VATDVASRGLDIPSVDLVIQNFDIPSNSKDYVHRVGRTARAGRSGKSITLVTQYDVVMLK 353
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
IE IG++LP F ++E V +L +RV EA R +++ +++
Sbjct: 354 GIEAAIGRQLPAFDCDKEAVAILSDRVNEAARAARIEMRE 393
>gi|440299556|gb|ELP92108.1| ATP-dependent rRNA helicase rrp3, putative [Entamoeba invadens IP1]
Length = 433
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/415 (50%), Positives = 294/415 (70%), Gaps = 7/415 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+E+GL E+++ E++G+K P+ IQ+ +IP AL+ KD+IG+AQTGSGKT AF LP+L
Sbjct: 14 TFQEIGLLPEVIKVVEHLGYKMPTPIQSSSIPVALKRKDIIGIAQTGSGKTAAFLLPMLN 73
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCAVLVGGVDMMQQTL 127
LL E +R FF V+ PTRELA Q+ E + + + L +LVGG+D M+Q +
Sbjct: 74 HLLNTNERKRD---FFCIVVEPTRELAAQVIEVLDRMAEALPGLVSCLLVGGMDEMKQAV 130
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L K+P+++V TPGRL+ H+ NTKG S L ++LV+DEAD+LL+ DF +D+++ +
Sbjct: 131 LLAKKPNVIVCTPGRLVYHINNTKGVSQSLQKTRFLVIDEADKLLDMDFAADIDKLIESV 190
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASKYSTVDTLKQQYRFVPAKYKDCYL 244
P+ R T LFSATM+ +V+KLQRA L +PVKI ++ KYSTVDTL+Q+Y F+P KY+D YL
Sbjct: 191 PKQRTTMLFSATMSSRVEKLQRASLVHPVKIKQSEQKYSTVDTLRQEYLFIPFKYRDGYL 250
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+ IL +V A S ++FT C L LMLR LG AIP++G MSQ KRL AL KFK+G+
Sbjct: 251 MAILQKVGAQSAIIFTMKCSGNTRLVLMLRQLGYEAIPLNGKMSQQKRLLALEKFKSGKR 310
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
++L+ TDVASRGLDIP VD VINYD P KDYIHRVGRTARAG++G+AI++V QY LE+
Sbjct: 311 SLLVATDVASRGLDIPDVDFVINYDCPVEPKDYIHRVGRTARAGKSGMAITIVTQYSLEF 370
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDED 419
Y +IE +I KKL E+ EE+ + + R +EA R+ +KD +K + + D++
Sbjct: 371 YQRIETMIEKKLDEYKVEEQVAMSYVNRCSEAMRVVNQILKDEASKEKERIKDKN 425
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/390 (54%), Positives = 283/390 (72%), Gaps = 7/390 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+TF EL L EL++AC+N+ + P+ IQ+++IP AL+G D+IGLAQTGSGKT AFA+PIL
Sbjct: 84 ETFSELNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAFAIPIL 143
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
+L + ++AC+L+PTRELA QI E F++LGS + +R +VGG++MM Q
Sbjct: 144 NSLWHDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQAR 197
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++PH+++ATPGRLMDHL NTKGFSL LKYLV+DEADRLL+ +F LD IL ++P
Sbjct: 198 DLMRKPHVIIATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDMEFGPVLDRILKILPT 257
Query: 188 M-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ +L+Y
Sbjct: 258 QGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNTFLIY 317
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E ST++FTRT ++ + L A + G ++Q++R GAL+ FKAG I
Sbjct: 318 LLNEYIGKSTIIFTRTKANAERISGLCNLLEFNATALHGDLNQNQRTGALDLFKAGRKTI 377
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L
Sbjct: 378 LVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELIL 437
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
+IE+++GKKLP+ ++E +L L + V +A
Sbjct: 438 RIEEVLGKKLPKETVDKEMILTLRDSVDKA 467
>gi|50305787|ref|XP_452854.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660562|sp|Q6CT85.1|RRP3_KLULA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49641987|emb|CAH01705.1| KLLA0C14608p [Kluyveromyces lactis]
Length = 487
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/386 (55%), Positives = 280/386 (72%), Gaps = 7/386 (1%)
Query: 12 ELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALL 71
EL L EL+EAC+N+ + P+ IQ++AIP AL+G D+IGLAQTGSGKT AFA+PIL L
Sbjct: 71 ELDLVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQLW 130
Query: 72 EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGK 131
+ ++AC+L+PTRELA QI E F++LGS + +R +VGG+ MM Q L +
Sbjct: 131 HDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMR 184
Query: 132 RPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM-RQ 190
+PHI++ATPGRLMDHL NTKGF+L LKYLV+DEADRLL+ +F LD ILN+IP R
Sbjct: 185 KPHIIIATPGRLMDHLENTKGFNLRKLKYLVMDEADRLLDMEFGPVLDRILNIIPTQGRT 244
Query: 191 TYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTE 250
TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ +L+Y+L E
Sbjct: 245 TYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNE 304
Query: 251 VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICT 310
ST+VFTRT ++ + L A + G ++Q++R GAL+ FKAG+ +IL+ T
Sbjct: 305 FIGKSTIVFTRTKANAERISNLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVAT 364
Query: 311 DVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEK 370
DVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L+IE
Sbjct: 365 DVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIED 424
Query: 371 LIGKKLPEFPAEEEEVLLLLERVTEA 396
++GKKLP+ +++ +L L + V +A
Sbjct: 425 VLGKKLPKENVDKDAILALRDSVDKA 450
>gi|119616690|gb|EAW96284.1| hCG27698, isoform CRA_d [Homo sapiens]
Length = 392
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/331 (61%), Positives = 262/331 (79%), Gaps = 8/331 (2%)
Query: 114 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 173
AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN D
Sbjct: 61 AVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMD 120
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYR 233
FE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y
Sbjct: 121 FETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 180
Query: 234 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRL
Sbjct: 181 FIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 240
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
G+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G A
Sbjct: 241 GSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKA 300
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
I+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R
Sbjct: 301 ITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKR 360
Query: 414 K---GGDEDDDIGRQFGINKK----KLSKRK 437
GD DD G G+ K K+ KRK
Sbjct: 361 SREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEG 45
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQA 61
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/395 (55%), Positives = 291/395 (73%), Gaps = 11/395 (2%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+++++F +L L EL+EAC+N+ + P+ IQA AIP ALEG+D+IGLAQTGSGKT AFA+
Sbjct: 69 EDLQSFNDLNLVPELIEACKNLNFDKPTPIQARAIPPALEGRDIIGLAQTGSGKTAAFAI 128
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PIL L E + ++ACVL+PTRELA Q E F++LG+ + +R +VGG++MM
Sbjct: 129 PILNRLWEDKQ------PYYACVLAPTRELAQQTKETFDSLGALMGVRSTCIVGGMNMMD 182
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L ++PHI++ATPGRLMDHL NTKGFSL L++LV+DEADRLL+ +F LD+IL V
Sbjct: 183 QARELMRKPHIIIATPGRLMDHLENTKGFSLRKLRFLVMDEADRLLDMEFGPVLDKILKV 242
Query: 185 IPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
IP R TYLFSATMT K+ KLQRA L PVK ++KY TVDTL Q VP+ K+ Y
Sbjct: 243 IPTQDRTTYLFSATMTSKIDKLQRASLTEPVKCAVSNKYQTVDTLVQTLMVVPSGLKNTY 302
Query: 244 LVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAIPISGHMSQSKRLGALNKFKA 301
L+Y+L E + ++FTRT +A RL AL NL + A + G ++Q++R GAL+ FKA
Sbjct: 303 LIYLLNENIGKTVIIFTRTKANAERLSALC--NLLEFNATALHGDLNQNQRTGALDLFKA 360
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 361 GRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 420
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++E V+ L + V +A
Sbjct: 421 LELILRIEEVLGKKLPKENCDKEVVISLRDSVDKA 455
>gi|388514089|gb|AFK45106.1| unknown [Medicago truncatula]
Length = 428
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/424 (53%), Positives = 298/424 (70%), Gaps = 15/424 (3%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKD-LIGLAQTGSGKTGAFA 63
+E+K+F +LGL +LVEACE + W +P KIQ E IP AL+GKD +IG++ SGK GAF
Sbjct: 3 EEMKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFV 62
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQALLE N T FACVLSP+R+L +I+E F+ LGS ++CA LV D++
Sbjct: 63 LPILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDII 119
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFE-KSLDEIL 182
QT + ++PH++V T ++ HL T+GFSL LKYLV+ EAD LLND FE + L++IL
Sbjct: 120 DQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDIL 179
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
++IP R+T+LFS+TMT+KV +QR L+NP+KI+ +SKYSTV T QQ F+PA KDC
Sbjct: 180 SIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDC 239
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYILTE++ + VFT+TC + LLAL+L+NL RAIPI +MSQ+K+LGALN FK+G
Sbjct: 240 YLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSG 299
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE- 361
+ NIL+C++ A RGLDIP+VDMVINY+IP + DY+HRVG T G AIS VN YE
Sbjct: 300 KFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEA 356
Query: 362 --LEWY----LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
LE +Q+ GKKLP +PA E VLL V EA+R+++ IK+SG K
Sbjct: 357 GQLEMIERHTVQVFYFSGKKLPVYPAPCENVLLWRGTVREAERLARKEIKESGWKSGGYL 416
Query: 416 GDED 419
GDE+
Sbjct: 417 GDEE 420
>gi|367014487|ref|XP_003681743.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
gi|359749404|emb|CCE92532.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
Length = 501
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/429 (51%), Positives = 294/429 (68%), Gaps = 15/429 (3%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+ EK +++F L + EL++AC+N+ + P+ IQA+AIP ALEGKD+IGLAQTGSGKT A
Sbjct: 75 STEKTLESFSGLNIVPELLQACKNLNFTKPTPIQAKAIPPALEGKDIIGLAQTGSGKTAA 134
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL L ++AC+LSPTRELA QI E F++LG+ + R +VGG++
Sbjct: 135 FALPILNRLWHDQS------PYYACILSPTRELAQQIKETFDSLGTIMGARTTCIVGGMN 188
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD I
Sbjct: 189 MMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRI 248
Query: 182 LNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
L +IP R TYLFSATMT K+ KLQRA L +PVK ++KY TVDTL Q VP K
Sbjct: 249 LKIIPTQGRTTYLFSATMTSKIDKLQRASLTDPVKCAVSNKYQTVDTLVQTLMVVPGGLK 308
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+ +L+Y+L E +T++FTRT ++ + L A + G ++Q++R GAL+ FK
Sbjct: 309 NTFLIYLLNEFIGKTTIIFTRTKANAERISGLCNLLEFNATALHGDLNQNQRTGALDLFK 368
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY
Sbjct: 369 AGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQY 428
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLL--------ERVTEAKRISQMTIKDSGNKRR 412
+LE L+IE+++GKKLP+ + + V+ L E + E R ++ I SG +R
Sbjct: 429 DLELILRIEEVLGKKLPKENVDRDLVMSLRNSVDKANGEVIMELNRRNKEKIARSGGRRS 488
Query: 413 RKGGDEDDD 421
R D D
Sbjct: 489 RMAARMDMD 497
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/410 (52%), Positives = 291/410 (70%), Gaps = 9/410 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +L L EL++AC+N+ + P+ IQA AIP AL G D+IGLAQTGSGKT AFA+PIL
Sbjct: 74 SFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILN 133
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + ++ACVL+PTRELA QI E F++LGS + +R +VGG++MM Q
Sbjct: 134 KLWEDQQ------PYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARD 187
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP-R 187
L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL +IP +
Sbjct: 188 LMRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIPTK 247
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ +L+Y+
Sbjct: 248 GRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFLIYL 307
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + ++FTRT L+ + L A + G ++Q++R GAL+ FKAG+ +IL
Sbjct: 308 LNEFIGKTVIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSIL 367
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L+
Sbjct: 368 VATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILR 427
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQMTIKDSGNKRRRKG 415
IE+++GKKLP+ ++ +L L + V +A + + +M ++ + R KG
Sbjct: 428 IEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVMEMNRRNKEKQARGKG 477
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/396 (53%), Positives = 288/396 (72%), Gaps = 7/396 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
++ ++F EL L EL++AC+N+ ++ P+ IQ+++IP AL GKD+IGLAQTGSGKT A
Sbjct: 61 GNDETFESFTELNLVPELIQACKNLNYEKPTPIQSKSIPPALNGKDIIGLAQTGSGKTAA 120
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FA+PIL +L +P ++AC+LSPTRELA QI E F++LGS + +R +VGG++
Sbjct: 121 FAIPILNSLW-----HDQLP-YYACILSPTRELAQQIKETFDSLGSLMGVRTVCIVGGMN 174
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
MM Q L ++PHI++ATPGRLMDHL NT+GFSL L+YLV+DEADRLL+ +F LD I
Sbjct: 175 MMDQARDLMRKPHIIIATPGRLMDHLENTRGFSLRKLRYLVMDEADRLLDMEFGPVLDRI 234
Query: 182 LNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
L ++P R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K
Sbjct: 235 LKILPTEGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLK 294
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+ +L+Y+L E + ++FTRT +A + L A + G ++Q++R GAL+ FK
Sbjct: 295 NTFLIYLLNEFHGKTFIIFTRTKANAERIAGLANLLEFNATALHGDLNQNQRTGALDLFK 354
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY
Sbjct: 355 AGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQY 414
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
+LE L+IE+++GKKLP+ +++ +L L + V +A
Sbjct: 415 DLELILRIEEVLGKKLPKESVDKDIILSLRDSVDKA 450
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/395 (53%), Positives = 284/395 (71%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +TF +L L EL++AC+N+ + P+ IQ+++IP AL+G D+IGLAQTGSGKT AF
Sbjct: 75 EGDSFETFSQLNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAF 134
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 135 AIPILNRLWHDQE------PYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNM 188
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 189 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 248
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 249 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 308
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 309 TYLVYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 368
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 369 GKRAILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 428
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 429 LELILRIEEVLGKKLPKENVDKNIILTLRDSVDKA 463
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/395 (53%), Positives = 286/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E + ++F EL L EL++AC+N+ + P+ IQ+++IP AL+G D+IGLAQTGSGKT AF
Sbjct: 78 EGESFESFNELNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAF 137
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 138 AIPILNRLWHDQE------PYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNM 191
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 192 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 251
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 252 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQALMVVPGGLKN 311
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 312 TYLIYLLNESIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 371
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 372 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 431
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++G+KLP+ ++ +L L + V +A
Sbjct: 432 LELILRIEEVLGRKLPKENVDKSIILTLRDSVDKA 466
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/394 (53%), Positives = 286/394 (72%), Gaps = 7/394 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+ +F+EL L EL+EAC+N+ + P+ IQ++AIP AL+GKD+IGLAQTGSGKT AFA
Sbjct: 62 EEGFSSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFA 121
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PIL L + ++AC+L+PTRELA QI E F++LGS + +R +VGG++MM
Sbjct: 122 IPILNRLWHDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMM 175
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI++ATPGRLMDHL NTKGF+L L++LV+DEADRLL+ +F LD IL
Sbjct: 176 DQARDLMRKPHIIIATPGRLMDHLENTKGFALRKLQFLVMDEADRLLDMEFGPVLDRILK 235
Query: 184 VIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 236 NIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNT 295
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
+L+Y+L E +T+VFTRT ++ + L A + G ++Q++R GAL+ FKAG
Sbjct: 296 FLIYLLNEFIGKTTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAG 355
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G ++SLV+QY+L
Sbjct: 356 KKSILVATDVAARGLDIPSVDLVINYDIPVDSKSYIHRVGRTARAGRSGKSVSLVSQYDL 415
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
E L+IE+++GKKLP+ ++ VL L + V +A
Sbjct: 416 ELILRIEEVLGKKLPKENVDKSIVLSLRDSVDKA 449
>gi|167375363|ref|XP_001733609.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165905196|gb|EDR30262.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/396 (52%), Positives = 280/396 (70%), Gaps = 7/396 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LGL E+++ E +G+K P+KIQ +IP AL+ KD+IG+AQTGSGKT +F LP++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTKIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMI 68
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCAVLVGGVDMMQQT 126
Q LL + E R AF+ ++ PTRELA Q+ E + +G + L +LVGG+D+M+Q+
Sbjct: 69 QHLLNVKEKNR---AFYCIIIEPTRELAAQVVEVLDEIGKALPGLMSCLLVGGMDVMKQS 125
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
+ L KRPH++V TPGR++ H+ NTKG S+ +K+LV+DEAD+LL DF +D ++
Sbjct: 126 IQLAKRPHVIVGTPGRIVYHIKNTKGVEESIQKVKFLVIDEADKLLEMDFANEIDYLIEK 185
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P R T LFSATM+ KV+KLQRA L +PVKI E KY TVDTL+Q+Y F+P KY+D Y
Sbjct: 186 LPSQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEYCFIPFKYRDGY 245
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+ IL E S ++FT C L +MLR LG AIP+ G MSQ KRL AL KFK+G+
Sbjct: 246 LLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPLHGKMSQQKRLIALEKFKSGK 305
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLDIP+VD+VINYD P KDYIHRVGRTARAG++G AI+LV QY +E
Sbjct: 306 RGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAGKSGYAITLVTQYSIE 365
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 399
Y +IE +I KKL E+ E+E + ++ +A RI
Sbjct: 366 LYQRIETMIEKKLNEYKVNEKEAIAYSQKANDAMRI 401
>gi|167384217|ref|XP_001736854.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165900561|gb|EDR26857.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/396 (52%), Positives = 280/396 (70%), Gaps = 7/396 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LGL E+++ E +G+K P+KIQ +IP AL+ KD+IG+AQTGSGKT +F LP++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTKIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMI 68
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCAVLVGGVDMMQQT 126
Q LL + E R AF+ ++ PTRELA Q+ E + +G + L +LVGG+D+M+Q+
Sbjct: 69 QHLLNVKEKNR---AFYCIIIEPTRELAAQVVEVLDEIGKALPGLMSCLLVGGMDVMKQS 125
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
+ L KRPH++V TPGR++ H+ NTKG S+ +K+LV+DEAD+LL DF +D ++
Sbjct: 126 VQLAKRPHVIVGTPGRIVYHIKNTKGVEESIQKVKFLVIDEADKLLEMDFANEIDYLIEK 185
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P R T LFSATM+ KV+KLQRA L +PVKI E KY TVDTL+Q+Y F+P KY+D Y
Sbjct: 186 LPSQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEYCFIPFKYRDGY 245
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+ IL E S ++FT C L +MLR LG AIP+ G MSQ KRL AL KFK+G+
Sbjct: 246 LLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPLHGKMSQQKRLIALEKFKSGK 305
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLDIP+VD+VINYD P KDYIHRVGRTARAG++G AI+LV QY +E
Sbjct: 306 RGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAGKSGYAITLVTQYSIE 365
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 399
Y +IE +I KKL E+ E+E + ++ +A RI
Sbjct: 366 LYQRIETMIEKKLNEYKVNEKEAIAYSQKANDAMRI 401
>gi|363750628|ref|XP_003645531.1| hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889165|gb|AET38714.1| Hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
Length = 486
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/390 (54%), Positives = 281/390 (72%), Gaps = 7/390 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
++F++L + EL+EACEN+ + P+ IQ++AIP AL+G D+IGLAQTGSGKT AFA+PIL
Sbjct: 66 ESFRDLDIVPELIEACENLKFTKPTPIQSKAIPPALQGNDIIGLAQTGSGKTAAFAIPIL 125
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L + ++AC+L+PTRELA QI E F++LGS + +R ++GG++MM Q
Sbjct: 126 NQLWHDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIMGGMNMMDQAR 179
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP- 186
L ++PHI++ATPGRLMDHL NTKGFSL L++LV+DEADRLL+ +F LD IL IP
Sbjct: 180 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLRFLVIDEADRLLDMEFGAVLDRILKNIPT 239
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ YL+Y
Sbjct: 240 KGRTTYLFSATMTSKIDKLQRASLTNPVKCSVSNKYQTVDTLIQTLMVVPGGLKNTYLIY 299
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E ST+VFTRT ++ + L A + G ++Q++R GAL+ FKAG +I
Sbjct: 300 LLNEFIGKSTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAGRRSI 359
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L
Sbjct: 360 LVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELIL 419
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
+IE ++GKKLP+ + +L L + V +A
Sbjct: 420 RIEDVLGKKLPKEDINKNMILSLRDSVDKA 449
>gi|156837514|ref|XP_001642781.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160358661|sp|A7TS37.1|RRP3_VANPO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|156113348|gb|EDO14923.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 506
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/391 (54%), Positives = 284/391 (72%), Gaps = 11/391 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +L L EL+EAC+N+ + P+ IQA +IP AL+G D+IGLAQTGSGKT AFA+PIL
Sbjct: 87 SFSDLDLVPELIEACKNLNFAKPTPIQARSIPPALQGHDIIGLAQTGSGKTAAFAIPILN 146
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + ++AC+L+PTRELA QI E F++LGS + +R A +VGG++MM Q
Sbjct: 147 RLWHDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSACIVGGMNMMDQARD 200
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP-R 187
L ++PHI++ATPGRLMDHL NT+GFSL LK+LV+DEADRLL+ +F LD IL +IP +
Sbjct: 201 LMRKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQ 260
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ YL+Y+
Sbjct: 261 GRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNTYLIYL 320
Query: 248 LTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAIPISGHMSQSKRLGALNKFKAGECN 305
+ E + +VFTRT +A R+ L NL + A + G ++Q++R G+L+ FKAG +
Sbjct: 321 MNEFIGKTIIVFTRTKANAERITTLA--NLLEFSATALHGDLNQNQRTGSLDLFKAGRRS 378
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE
Sbjct: 379 ILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELI 438
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
L+IE ++GKKLP+ ++ +L L + V +A
Sbjct: 439 LRIEDVLGKKLPKENVNKDAILTLRDSVDKA 469
>gi|409080848|gb|EKM81208.1| hypothetical protein AGABI1DRAFT_119719 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 398
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/414 (52%), Positives = 293/414 (70%), Gaps = 25/414 (6%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E K+F +LGL L++A E++ ++TP++IQAE IP AL G+D+IG+A TGSGKT AFALP
Sbjct: 5 EAKSFSDLGLCTPLIKALEDLKYETPTQIQAECIPPALSGRDIIGIAPTGSGKTIAFALP 64
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV-DMMQ 124
IL L + ++ FA VLSPTRELA QIS QFEALG+ + +R V+VGG D +Q
Sbjct: 65 ILHRLWDNPQSN------FALVLSPTRELAYQISAQFEALGAAMGVRSVVIVGGEEDRVQ 118
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q + L K+PHI+VATPGRL DHL +TKGFSL LK+LVLDEADRL
Sbjct: 119 QAVRLAKKPHIIVATPGRLHDHLNSTKGFSLRQLKHLVLDEADRL--------------A 164
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCY 243
IPR R TYLFSATMT V KLQRA L +PV+++ +S KY TV +L Q Y P K+
Sbjct: 165 IPRERSTYLFSATMTANVTKLQRASLTDPVRVDVSSFKYKTVPSLLQYYVLCPLVNKEVM 224
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVY++ ++ ++ +VF RT + L+++LR L +A+P+ G +SQS+RLGA N+FK+G+
Sbjct: 225 LVYLINSMAQNTIIVFVRTVADAKRLSIVLRTLEFQAVPLHGELSQSQRLGAFNRFKSGK 284
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NIL+ TD+ASRGLD+ +VD+VINYD PT+SKDY+HRVGRTARAGR G +I +V+QY+ E
Sbjct: 285 SNILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRVGRTARAGRAGKSILMVSQYDAE 344
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD---SGNKRRRK 414
L++E + +KL +P E EE+ LL ERV E R+++ IK+ S N+RR++
Sbjct: 345 VMLRLEMALERKLELYPTEAEEIALLKERVYEVGRVARNQIKEDDMSQNERRKR 398
>gi|60649461|gb|AAH91696.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
Length = 323
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/321 (62%), Positives = 256/321 (79%), Gaps = 6/321 (1%)
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 1 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 60
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 61 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 120
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 121 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 180
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 181 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 240
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
E + +IE LIGKKLP FP ++EEV++L ERV+EA+R ++M +++ G K++RK D +DD
Sbjct: 241 ELFQRIEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMELREHGEKKKRKREDPGDDD 300
Query: 421 DIGRQFGINKK----KLSKRK 437
D G+ K K+ KRK
Sbjct: 301 DTEGAIGVRNKVAGGKMKKRK 321
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/373 (55%), Positives = 274/373 (73%), Gaps = 7/373 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 118 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 177
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 178 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 231
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 232 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 291
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 292 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 351
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 352 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 411
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 412 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 471
Query: 362 LEWYLQIEKLIGK 374
LE L+IE+++GK
Sbjct: 472 LELILRIEEVLGK 484
>gi|67477952|ref|XP_654408.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56471449|gb|EAL49018.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703981|gb|EMD44318.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba histolytica
KU27]
Length = 432
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/396 (51%), Positives = 279/396 (70%), Gaps = 7/396 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LGL E+++ E +G+K P++IQ +IP AL+ KD+IG+AQTGSGKT +F LP++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMV 68
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCAVLVGGVDMMQQT 126
Q LL + E R F+ ++ PTRELA Q+ E + +G + L +LVGG+D+M+Q+
Sbjct: 69 QHLLNVKEKNR---GFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQS 125
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
+ L KRP ++V TPGR++ H+ NTKG S+ +K+LV+DEAD+LL DF +D ++
Sbjct: 126 VQLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDYLIEK 185
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ R T LFSATM+ KV+KLQRA L +PVKI E KY TVDTL+Q+Y F+P KY+D Y
Sbjct: 186 LPKQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEYCFIPFKYRDGY 245
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+ IL E + ++FT C L +MLR +G AIP+ G MSQ KRL AL KFK+G+
Sbjct: 246 LISILKETEGKTIIIFTMKCSGCTKLVMMLRQMGYAAIPLHGKMSQQKRLIALEKFKSGK 305
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLDIP+VD+VINYD P KDY+HRVGRTARAG++G AI+LV QY +E
Sbjct: 306 RGILVATDVASRGLDIPNVDIVINYDCPLEPKDYVHRVGRTARAGKSGYAITLVTQYSIE 365
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 399
Y +IE +I KKL E+ E+E + ++ EA R+
Sbjct: 366 LYQRIETMIEKKLNEYKVNEKEAIAYSQKANEAMRV 401
>gi|124801418|ref|XP_001349688.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7]
gi|3845295|gb|AAC71961.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7]
gi|156072124|gb|ABU45413.1| DEAD-box helicase 2 [Plasmodium falciparum]
Length = 562
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 290/405 (71%), Gaps = 8/405 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
EK+ TF++L + +E++E+ + +GWK P++IQ E +PHA KD+IGL++TGSGKT F
Sbjct: 152 EKQNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFI 211
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ L + +F+A V+SPTREL IQIS+ F+ALG + + + GGVD++
Sbjct: 212 IPILQDL------KVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIV 265
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+L L K+P+++V+TPGR++DHL NTKGF+L LKYLV DEAD+LL+ DFE S++++L
Sbjct: 266 TQSLNLAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLL 325
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
++P R T+LFSATMTK V KL++ACLKNPVK+E ++KYSTV TL + Y F+P KYK Y
Sbjct: 326 ILPPNRITFLFSATMTKNVAKLKKACLKNPVKVEVSNKYSTVSTLIETYIFLPLKYKYTY 385
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L + + ++FT TC + L RNLG ++I + G ++Q++RL +LN FK +
Sbjct: 386 LSSLCFHYQTRNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNSFKVNK 445
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI T V +RGLD+ + +VIN+DI + K+YIHRVGRTARAGR+G +I+ V QY++E
Sbjct: 446 YNILISTQVGARGLDLQDIKIVINFDICS-CKEYIHRVGRTARAGRSGKSITFVTQYDVE 504
Query: 364 WYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKDS 407
+L IEK + KK+ +F +E +VLL E+ EA R+S++ +K++
Sbjct: 505 NFLAIEKQLNKKIDKFTDLDENDVLLYHEQTIEALRLSEIEMKEN 549
>gi|399217362|emb|CCF74249.1| unnamed protein product [Babesia microti strain RI]
Length = 394
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/408 (51%), Positives = 276/408 (67%), Gaps = 17/408 (4%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF ELG+ EL EACE++GWKTP+ IQ IP ALEG SGKT AF LP+L
Sbjct: 3 KTFAELGICPELCEACESLGWKTPTAIQIATIPPALEG----------SGKTAAFVLPVL 52
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LLE T F L+PTREL QISEQF+ALG+ I+L A ++GG+DM Q +
Sbjct: 53 QSLLE------TPSRLFCVALAPTRELCAQISEQFKALGANIALEVATILGGLDMNSQAM 106
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPH++VA+PGRL DH+ NTKGF L + K+L+LDEADR+L+ DF+ +L+ I+ +P
Sbjct: 107 ALSKRPHVIVASPGRLSDHIENTKGFFLKSSKFLILDEADRILSMDFDDALNNIIKAMPE 166
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT+LFSATMT KV KLQ+A LKNPV+ E KY TV L+Q + P KYK + +
Sbjct: 167 ERQTFLFSATMTSKVSKLQKASLKNPVRYEIGGKYDTVSGLEQNFYLCPFKYKWTVITLL 226
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ + ++ T+VF TC R L+ L NL + + G MSQ RL ALN FKAG NIL
Sbjct: 227 VEKFTSCVTIVFCNTCSTARKLSFYLDNLTHKTTCLHGKMSQPLRLSALNNFKAGSSNIL 286
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ T+V SRGLDIPSVD+V+N+D+P + KDYIHRVGRTARAGR+G AI+LV QY++E + +
Sbjct: 287 VTTEVGSRGLDIPSVDLVVNFDVPQSGKDYIHRVGRTARAGRSGQAITLVTQYDVEAFQR 346
Query: 368 IEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+E +G KL F E +++ E ++AKR ++ T +S K R+K
Sbjct: 347 VEFALGIKLKPFDEFSEAQIMSKHELCSQAKRKAESTAAESPLKHRKK 394
>gi|221502154|gb|EEE27898.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 479
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 292/435 (67%), Gaps = 23/435 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL EL + +GWK+P+ IQ+E +P+AL+G+D+I LA+TGSGKT AF LPILQ
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ QR F+A +L+PTREL +QIS+Q A+G + + LVGG+D Q +A
Sbjct: 112 RLLQ--RTQR----FYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIA 165
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI--P 186
L K+PH+VV +PGR++DHL TKGFSL ++K LVLDEADRLL+ DF+ +L +L + P
Sbjct: 166 LAKKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSP 225
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSATMT KV KLQ+A LK PVK+E SKY L+Q + VP K K +L
Sbjct: 226 AERQTMLFSATMTTKVSKLQKASLKKPVKLEVNSKYDVASHLQQHFLLVPFKLKHTHLAA 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
L +S SS +VFT TC R AL LR+LG +++ + G M+Q +R+GAL KF+A E +
Sbjct: 286 ALLHLSPSSVIVFTNTCANARKTALFLRHLGFQSVCLHGKMTQPQRIGALTKFRAAETSC 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ T+V SRGLDIP V MVIN+D+P +SK+YIHRVGRTARAGRTG A+++V QY++E Y
Sbjct: 346 LVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALTIVTQYDVEAYQ 405
Query: 367 QIEKLIGKKLPEFP--AEEEEVLLLLERVTEAKRISQMTIKDS--------GNKRRRKGG 416
+IE +G+KL E E+V+ L E+V EA R +++ +++ K++R G
Sbjct: 406 RIEHALGQKLEELTELTATEKVMPLHEKVLEALRSAELEAREADEAALVQKAAKKKRGAG 465
Query: 417 DEDDDIGRQFGINKK 431
++ R G KK
Sbjct: 466 NK-----RSSGAGKK 475
>gi|74143864|dbj|BAE41247.1| unnamed protein product [Mus musculus]
Length = 323
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/322 (62%), Positives = 256/322 (79%), Gaps = 8/322 (2%)
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+P+IV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 1 MSQSLALAKKPNIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 60
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 61 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 120
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 121 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 180
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 181 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 240
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 419
E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +++ G K++RK GD+D
Sbjct: 241 ELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHGEKKKRKREDAGDDD 300
Query: 420 DDIGRQFGINKK----KLSKRK 437
D G G+ K K+ KRK
Sbjct: 301 DKEG-AIGVRNKVAGGKMKKRK 321
>gi|237845351|ref|XP_002371973.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|61676032|gb|AAX51681.1| DEAD box RNA helicase [Toxoplasma gondii]
gi|211969637|gb|EEB04833.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 479
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 292/435 (67%), Gaps = 23/435 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL EL + +GWK+P+ IQ+E +P+AL+G+D+I LA+TGSGKT AF LPILQ
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ QR F+A +L+PTREL +QIS+Q A+G + + LVGG+D Q +A
Sbjct: 112 RLLQ--RTQR----FYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIA 165
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI--P 186
L K+PH+VV +PGR++DHL TKGFSL ++K LVLDEADRLL+ DF+ +L +L + P
Sbjct: 166 LAKKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSP 225
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSATMT KV KLQ+A LK PVK+E SKY L+Q + VP K K +L
Sbjct: 226 AERQTMLFSATMTTKVSKLQKASLKKPVKLEVNSKYDVASHLQQHFLLVPFKLKHTHLAA 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
L +S SS +VFT TC R AL LR+LG +++ + G M+Q +R+GAL KF+A E +
Sbjct: 286 ALLHLSPSSVIVFTNTCANARKTALFLRHLGFQSVCLHGKMTQPQRIGALTKFRAAETSC 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ T+V SRGLDIP V MVIN+D+P +SK+YIHRVGRTARAGRTG A+++V QY++E Y
Sbjct: 346 LVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALTIVTQYDVEAYQ 405
Query: 367 QIEKLIGKKLPEFP--AEEEEVLLLLERVTEAKRISQMTIKDS--------GNKRRRKGG 416
+IE +G+KL E E+V+ L E+V EA R +++ +++ K++R G
Sbjct: 406 RIEHALGQKLEELTELTATEKVMPLHEKVLEALRSAELEAREADEAALVQKAAKKKRGAG 465
Query: 417 DEDDDIGRQFGINKK 431
++ R G KK
Sbjct: 466 NK-----RSSGAGKK 475
>gi|401400548|ref|XP_003880804.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
gi|325115216|emb|CBZ50771.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
Length = 462
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 288/422 (68%), Gaps = 18/422 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL EL + +GW+ P+ IQ+E +P+AL+G+D+I LA+TGSGKT AF LPILQ
Sbjct: 34 TFSSLGLCAELCASVSTLGWRAPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 93
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ QR F+A +L+PTREL +QIS+Q A+G + + LVGG+D Q +A
Sbjct: 94 QLLQ--RTQR----FYALILAPTRELCLQISQQMLAMGGSLGVTVVTLVGGLDHNTQAIA 147
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI--P 186
L K+PH+VV +PGR++DHL TKGFSL ++K LVLDEADRLL+ DF+ +L +L + P
Sbjct: 148 LAKKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSP 207
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSATMT KV KLQ+A LK PVK+E SKY L+Q + VP K K +L
Sbjct: 208 AERQTMLFSATMTTKVSKLQKASLKKPVKLEVNSKYDVASLLQQHFLLVPFKLKHTHLAA 267
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
L +S SS +VFT TC R +AL LR+LG +++ + G M+Q +R+GAL KF+A E +
Sbjct: 268 ALLHLSPSSVIVFTNTCANARTIALFLRHLGFQSVCLHGKMTQPQRIGALTKFRAAETSC 327
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ T+V SRGLDIP V MVIN+D+P +SK+YIHRVGRTARAGRTG A+++V QY++E Y
Sbjct: 328 LVATEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALTIVTQYDVEAYQ 387
Query: 367 QIEKLIGKKLPEFP--AEEEEVLLLLERVTEAKRISQMTIKDSGN--------KRRRKGG 416
+IE +G+KL E E+V+ L E+V EA R +++ +++ + K++R G
Sbjct: 388 RIEHALGQKLDELTELTATEKVMPLHEKVLEALRSAELEAREADDAALVQKAAKKKRGAG 447
Query: 417 DE 418
+
Sbjct: 448 SK 449
>gi|84994532|ref|XP_951988.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
gi|65302149|emb|CAI74256.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 455
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/379 (53%), Positives = 278/379 (73%), Gaps = 9/379 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++LG+ EL AC+ +GWKTP+KIQ EAIP AL GKD+IGLA+TGSGKT AF +PILQ
Sbjct: 42 TFEDLGVCVELCRACKELGWKTPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQ 101
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LLE + QR F+ +L+PTREL++QI EQ +L G+ + C +L GG+DM+ Q L
Sbjct: 102 KLLE--KPQR----LFSLILAPTRELSLQIKEQLISLEIGLDV-CLIL-GGLDMVSQALQ 153
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+V +PGR+ DHL NTKGFSL T+KYLVLDEAD+LL+ DF+ SL++I+ +P+
Sbjct: 154 LSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSADFDDSLNKIIISLPKD 213
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+ TYL+SATMT K+ KLQ+ L P++I +KY T + L Q+Y +P K+K YL IL
Sbjct: 214 KVTYLYSATMTSKITKLQKVTLMKPIQINVNTKYHTNELLIQKYLLIPLKFKYTYLACIL 273
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S S+ MVF TC ++ + L L+NL +++ + G +SQ +RL +LN FK G NIL+
Sbjct: 274 WKYSTSTIMVFCNTCLTSQKVTLFLQNLSFKSVCLHGKLSQIQRLNSLNSFKTGLFNILV 333
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDV SRG+DIP VD+VIN+D+P SKDYIHRVGRTARAG++G++++L+ QY++E + +I
Sbjct: 334 VTDVGSRGIDIPFVDLVINFDVPNTSKDYIHRVGRTARAGKSGISLTLITQYDIEAFQRI 393
Query: 369 EKLIGKKLPEFP-AEEEEV 386
E + KKL E+ EEEV
Sbjct: 394 EYALNKKLEEYKDISEEEV 412
>gi|71031306|ref|XP_765295.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68352251|gb|EAN33012.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 470
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/412 (49%), Positives = 286/412 (69%), Gaps = 20/412 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++LG+ EL AC+ +GWK P+KIQ EAIP AL GKD+IGLA+TGSGKT AF +PILQ
Sbjct: 42 TFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQ 101
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LLE + QR F+ +L+PTREL++QI EQ +LGS I L +++GG+DM+ Q L
Sbjct: 102 KLLE--KPQR----LFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQ 155
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+V +PGR+ DHL NTKGFSL T+KYLVLDEAD+LL+ DF+ SL++I+ +P+
Sbjct: 156 LSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSLPKD 215
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+ TYL+SATMT K+ KLQ+ L P++I +KY T + L Q+Y +P K+K YL IL
Sbjct: 216 KVTYLYSATMTSKITKLQKVTLMKPIQINVNTKYHTSEHLIQKYLLIPLKFKYTYLACIL 275
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC---- 304
+ S S+ MVF TC ++ + L L+NL +++ + G +SQ +RL +LN FK G+
Sbjct: 276 WKYSTSTIMVFCNTCLTSQKVTLFLQNLSFKSVCLHGKLSQIQRLNSLNSFKTGKLQPIP 335
Query: 305 ---------NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
NIL+ TDV SRGLDIP VD+VIN+D+P SKDYIHRVGRTARAG++G++++
Sbjct: 336 QPHIISGLFNILVVTDVGSRGLDIPFVDLVINFDVPNTSKDYIHRVGRTARAGKSGISLT 395
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKD 406
L+ QY++E + + E + KKL E+ EEEV + + R ++M K+
Sbjct: 396 LITQYDIESFQRTEYALNKKLEEYKDISEEEVYNKYDECCNSLRNAEMDYKN 447
>gi|320587284|gb|EFW99764.1| ATP-dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 481
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/431 (50%), Positives = 295/431 (68%), Gaps = 26/431 (6%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELGL D L E CE +G+ P+ IQA AIP AL+ +D+IG A+TGSGKT AFALP+L
Sbjct: 70 KTFKELGLVDALCEVCEMLGYTAPTPIQAAAIPVALKNRDIIGTAETGSGKTIAFALPML 129
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ R P F VLSPTRELA+QI + FE+ + ISLRCAV+VGG+DM+ Q++
Sbjct: 130 QALLD-----RPRP-LFGLVLSPTRELAVQIGQTFESFAA-ISLRCAVVVGGMDMVSQSI 182
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PH+V TKGFSL L+YLV+DEADRLL+ DF L++IL +PR
Sbjct: 183 ALAKKPHVV-------------TKGFSLKHLQYLVIDEADRLLDMDFGPILEKILRHLPR 229
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T LFSATM+ +V+ LQRA L++PV++ A+S + TV TLKQ P KD LVY
Sbjct: 230 ERRTMLFSATMSSQVESLQRASLRDPVRVNVASSAHQTVSTLKQSVIVTPTTRKDVCLVY 289
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ E S MVFTRT T+ LA++LR LG A+P+ +SQS+RL ALNK K+G +
Sbjct: 290 LVNEFYGQSIMVFTRTIYETQRLAILLRALGFGAVPLHARLSQSQRLSALNKIKSGSREM 349
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVA+RGLDIP + +VINYD+P +SK Y+HRVGRTARAG++G A++LV QY+ +L
Sbjct: 350 LIATDVAARGLDIPHIGIVINYDVPQDSKTYVHRVGRTARAGKSGHAVNLVTQYDHTHFL 409
Query: 367 QIEKLIG--KKLPEFPAEEEEVLLLLERVTEAKRISQM---TIKDSGNKRRRKGGDEDDD 421
+EK IG +K+ FP + EE+++ RV EA+R + + T + KR++ G
Sbjct: 410 AVEKAIGMERKILPFPIDREELMMFNPRVEEAQRHAHVEMRTFIEQNGKRKKTGRSAAGG 469
Query: 422 IGRQFGINKKK 432
R G+++++
Sbjct: 470 QRRHDGMDREE 480
>gi|307200753|gb|EFN80820.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 334
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/334 (59%), Positives = 256/334 (76%), Gaps = 11/334 (3%)
Query: 115 VLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDF 174
VLVGG+DM Q L L K+PHI++ATPGRL+DHL NTKGFSL LK+LV+ EADR+LN DF
Sbjct: 1 VLVGGMDMSAQALLLSKKPHIIIATPGRLVDHLENTKGFSLRNLKFLVMGEADRILNMDF 60
Query: 175 EKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRF 234
E +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F
Sbjct: 61 EIEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIF 120
Query: 235 VPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+
Sbjct: 121 IPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIA 180
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
AL KFKA +ILI TDVASR LDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I
Sbjct: 181 ALTKFKARNRSILISTDVASRSLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSI 240
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGN 409
+ V QY++E Y +IE+LI K+LP +P EE EV+LL ERVTEA+RI +M +KD
Sbjct: 241 TFVTQYDVELYQRIEQLISKQLPLWPTEEGEVMLLQERVTEAQRIVKMEVKDIEENKKLG 300
Query: 410 KRRRKGGDEDDDIGRQFGI------NKKKLSKRK 437
KR+++ GD +DD + G+ N KK+ KR+
Sbjct: 301 KRKKRAGDNEDDTEQSIGVRKRIKGNGKKMGKRR 334
>gi|156083170|ref|XP_001609069.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796319|gb|EDO05501.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 433
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/380 (52%), Positives = 270/380 (71%), Gaps = 9/380 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E TF+ LG+ EL +AC+++GW+ P+ IQ AIPHAL G+D+IGLA TGSGKTGAF
Sbjct: 38 EASTTTTFQSLGVCPELCKACQSMGWQAPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAF 97
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+P+L LLE + QR + VL+P+REL QI+EQF AL S I+L+ V++GGVDM
Sbjct: 98 TIPVLHHLLE--DVQR----IYCVVLAPSRELCEQIAEQFRALSSSIALQVCVIIGGVDM 151
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q AL KRPH++VA+PGRL DH+ NTKGFSL T+K LV+DEADRLL+ DF++ LD+I+
Sbjct: 152 VHQASALAKRPHVIVASPGRLADHVENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKII 211
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+ +P RQT+LFSATMTKK+ KLQ+ LK+P+ ++ KYST + L Q++ VP KYK
Sbjct: 212 HAMPTERQTFLFSATMTKKLSKLQKMALKDPISVQVDDKYSTAENLDQRFLLVPQKYKYT 271
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI---PISGHMSQSKRLGALNKF 299
YL +L + + +VF +TCD + A L+ L I + G M+Q+ R AL F
Sbjct: 272 YLAALLWYYATRTAIVFCKTCDGAQRCAAYLKGLKFTTICKVCLHGKMTQADRSRALQIF 331
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
K G NIL+ T+V RGLD+P V++VIN+DIP SKDYIHRVGRTARAGR+G+A+++V Q
Sbjct: 332 KTGSVNILVATEVGGRGLDLPMVELVINFDIPECSKDYIHRVGRTARAGRSGLALTVVTQ 391
Query: 360 YELEWYLQIEKLIGKKLPEF 379
Y++E + +IE + KKL EF
Sbjct: 392 YDVELFQRIELALNKKLEEF 411
>gi|148232160|ref|NP_001084651.1| uncharacterized protein LOC414610 [Xenopus laevis]
gi|46249606|gb|AAH68844.1| MGC81500 protein [Xenopus laevis]
Length = 317
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/298 (66%), Positives = 245/298 (82%), Gaps = 6/298 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+E KTF++LG+ D L EACE +GWK P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 15 EEEQKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFA 74
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ LLE QR +A VL+PTRELA QISEQFEA+GS I ++ AV+VGG+DMM
Sbjct: 75 LPILQTLLE--SPQR----LYALVLTPTRELAFQISEQFEAIGSSIGVKSAVIVGGIDMM 128
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 129 SQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 188
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R+T+LFSATMTKKV+KL+RA LK+PVK +SKY TV+ L+Q Y F+P+K+KD Y
Sbjct: 189 VIPRDRKTFLFSATMTKKVQKLERAALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKDSY 248
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
LVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+ G MSQ+KRLGALNKFKA
Sbjct: 249 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQNKRLGALNKFKA 306
>gi|115400041|ref|XP_001215609.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
gi|114191275|gb|EAU32975.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
Length = 360
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/367 (53%), Positives = 271/367 (73%), Gaps = 16/367 (4%)
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+LQAL++ + F + +L+PTRELA QI+ EALG+ IS+RC +L+GG+DM+ Q
Sbjct: 1 MLQALMDKPQQ------FHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQ 54
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ALGK+PH++VATPGRL+DHL NTKGFSL TLKYLVLDEADRLL+ DF LD++L ++
Sbjct: 55 AIALGKKPHVIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRLL 114
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R+TYLFSATM+ KV+ LQRA L +PV++ ++K T L Q Y F+P K+KD YLV
Sbjct: 115 PK-RKTYLFSATMSSKVESLQRASLSDPVRVSVSTKNQTASKLLQSYLFIPHKFKDFYLV 173
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y+L E + ++FTRT T+ L++MLRNLG AIPI G +SQS RL +LNKF+A N
Sbjct: 174 YLLNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPIHGQLSQSARLASLNKFRARSRN 233
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+LI TDVA+RGLDIP+VD V+NYD+P +SK YIHRVGRTARAG++G+A S V QYE+E +
Sbjct: 234 LLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVELW 293
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK---------RRRKGG 416
L+IE +GKK+ E+ E++EV++ ERV +A+R++ +T++D +K R+R
Sbjct: 294 LRIEDALGKKVEEYKPEKDEVMIFAERVNDAQRVAALTMRDMQDKDNKGRGPRNRKRTRD 353
Query: 417 DEDDDIG 423
D D D G
Sbjct: 354 DLDQDDG 360
>gi|357490507|ref|XP_003615541.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355516876|gb|AES98499.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 398
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/394 (54%), Positives = 278/394 (70%), Gaps = 8/394 (2%)
Query: 28 WKTPSKIQAEAIPHALEGKD-LIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC 86
W +P KIQ E IP AL+GKD +IG++ SGK GAF LPILQALLE N T FAC
Sbjct: 3 WYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALLEAGPNLNTS---FAC 59
Query: 87 VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDH 146
VLSP+R+L +I+E F+ LGS ++CA LV D++ QT + ++PH++V T ++ H
Sbjct: 60 VLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQTNQILQQPHLIVGTLRQVFYH 119
Query: 147 LTNTKGFSLGTLKYLVLDEADRLLNDDFE-KSLDEILNVIPRMRQTYLFSATMTKKVKKL 205
L T+GFSL LKYLV+ EAD LLND FE + L++IL++IP R+T+LFS+TMT+KV +
Sbjct: 120 LRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSERRTFLFSSTMTEKVHMI 179
Query: 206 QRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDA 265
QR L+NP+KI+ +SKYSTV T QQ F+PA KDCYLVYILTE++ + VFT+TC +
Sbjct: 180 QRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGS 239
Query: 266 TRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMV 325
LLAL+L+NL RAIPI +MSQ+K+LGALN FK+G+ NIL+C++ A RGLDIP+VDMV
Sbjct: 240 AFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMV 299
Query: 326 INYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEE 385
INY+IP + DY+HRVG T G AIS VN YE IE+ GKKLP +PA E
Sbjct: 300 INYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQLEMIERHTGKKLPVYPAPCEN 356
Query: 386 VLLLLERVTEAKRISQMTIKDSGNKRRRKGGDED 419
VLL V EA+R+++ IK+SG K GDE+
Sbjct: 357 VLLWRGTVREAERLARKEIKESGWKSGGYLGDEE 390
>gi|426197762|gb|EKV47689.1| hypothetical protein AGABI2DRAFT_185614 [Agaricus bisporus var.
bisporus H97]
Length = 433
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/412 (51%), Positives = 292/412 (70%), Gaps = 18/412 (4%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +LGL L++A E++ ++TP++IQAE IP AL G+D+IG+A TGSGKT AFALPIL
Sbjct: 4 KSFSDLGLCAPLIKALEDLKYETPTQIQAECIPPALSGRDIIGIAPTGSGKTIAFALPIL 63
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV-DMMQQT 126
L + N + A++ +L QFEALG+ + +R V+VGG D +QQ
Sbjct: 64 HRLWD---NPQPNFAWYFLLLG----------TQFEALGATMGVRSVVIVGGEEDRVQQA 110
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ L K+PHI+VATPGRL DHL +TKGFSL LK+LVLDEADRLL+ +F+ + EIL IP
Sbjct: 111 VRLAKKPHIIVATPGRLHDHLNSTKGFSLRQLKHLVLDEADRLLDLEFQLQITEILRAIP 170
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLV 245
R R TYLFSATMT V KLQRA L +PV+++ +S KY TV TL Q Y P K+ LV
Sbjct: 171 RERSTYLFSATMTANVTKLQRASLTDPVRVDVSSFKYKTVSTLLQYYVLCPLVNKEVMLV 230
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y++ ++ ++ +VF RT + L+++LR L +A+P+ G +SQS+RLGA N+FK+G+ N
Sbjct: 231 YLINSMAQNTIIVFVRTVADAKRLSIVLRTLEFQAVPLHGELSQSQRLGAFNRFKSGKSN 290
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TD+ASRGLD+ +VD+VINYD PT+SKDY+HRVGRTARAGR G +I +V+QY+ E
Sbjct: 291 ILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRVGRTARAGRAGKSILMVSQYDAEVM 350
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD---SGNKRRRK 414
L++E + +KL +P E EE+ LL ERV E R+++ IK+ S N+RR++
Sbjct: 351 LRLEMALERKLELYPTEAEEIALLKERVYEVGRVARNQIKEDDMSQNERRKR 402
>gi|403222338|dbj|BAM40470.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 470
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/371 (52%), Positives = 272/371 (73%), Gaps = 8/371 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++LG+ EL AC+ +GWK P+KIQ EAIP AL+GKD+IGLA+TGSGKT AF +PILQ
Sbjct: 56 TFEDLGVSPELCRACKQLGWKRPTKIQVEAIPVALQGKDIIGLAETGSGKTAAFTIPILQ 115
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LLE + QR F+ +L+PTREL++QI EQ +LGS I L +++GG+DM+ Q L
Sbjct: 116 KLLE--KPQR----LFSLILTPTRELSLQIKEQLLSLGSEIGLDVCLILGGLDMVTQALQ 169
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+V +PGR+ DHL NTKGFSL T+K+LVLDEADR+L+ DF+ SL++I+ +P+
Sbjct: 170 LSKKPHIIVGSPGRVADHLQNTKGFSLETIKFLVLDEADRILSIDFDDSLNKIIQSLPKE 229
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYL+SATMT K+ KLQ+ L P+ I +KY T L Q+Y +P K+K YL +L
Sbjct: 230 RITYLYSATMTSKLSKLQKVTLIKPININ--TKYHTNQLLIQKYLLIPLKFKFTYLACVL 287
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S+ M+F TC ++ + + L+NL ++I + G ++Q++RL +LN FK G N+L+
Sbjct: 288 WKFPQSTCMIFCNTCLTSQKVTIFLQNLEFKSICLHGKLTQTQRLNSLNSFKTGLKNVLV 347
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDV SRGLDIP VD+VIN+D+P SKDYIHRVGRTARAG++G++++ + QY++E + +I
Sbjct: 348 VTDVGSRGLDIPLVDLVINFDVPQTSKDYIHRVGRTARAGKSGLSVTFITQYDVESFQRI 407
Query: 369 EKLIGKKLPEF 379
E + KKL EF
Sbjct: 408 EYTLDKKLEEF 418
>gi|221052953|ref|XP_002257851.1| RNA helicase [Plasmodium knowlesi strain H]
gi|193807683|emb|CAQ38387.1| RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 546
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/412 (47%), Positives = 291/412 (70%), Gaps = 8/412 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E E TF++L + +E++++ + +GWK P+ IQ + +P A + +D+IGL++TGSGKT F
Sbjct: 134 EADERTTFRDLNICEEILQSIDELGWKKPTAIQRKMLPCAFQQRDIIGLSETGSGKTACF 193
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+PILQ L ++ +FFA V+SPTREL IQI++ F+ALGS + + + GGVD+
Sbjct: 194 IIPILQEL------RQKRQSFFALVISPTRELCIQIAQHFQALGSNLLVNICTIFGGVDI 247
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+L L K+P+I+V+TPGR++DHL NTKGF+L LKYLV DEAD+LL+ DFE S++++L
Sbjct: 248 VTQSLNLAKKPNIIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSLDFEASINKLL 307
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
++P+ R T+LFSATMTK V KL++A LKNP+KIE ++KYST TL + Y F+P KYK
Sbjct: 308 LILPQKRTTFLFSATMTKSVAKLKKASLKNPIKIEVSNKYSTASTLIENYIFIPLKYKYT 367
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL + S+ ++F TC + + RNLG ++I + G ++Q++RL +LN FK+
Sbjct: 368 YLCSLCFHFSSRCIIIFANTCATAQKINFFCRNLGLKSICLHGKLTQNQRLSSLNSFKSK 427
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
NILI T V +RGLD+ + +VIN+D+ + K+YIHRVGRTARAGRTG +I+ V QY++
Sbjct: 428 RYNILISTQVGARGLDLKDIKIVINFDLCS-CKEYIHRVGRTARAGRTGKSITFVTQYDV 486
Query: 363 EWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
E +L IEK++ KK+ +F +E +VLL E+ EA R++ +K++ + RR
Sbjct: 487 ENFLAIEKMLNKKIDKFNELDENDVLLYHEQTVEALRLADTEMKENQDLYRR 538
>gi|156093649|ref|XP_001612863.1| DEAD/DEAH box helicase [Plasmodium vivax Sal-1]
gi|148801737|gb|EDL43136.1| DEAD/DEAH box helicase, putative [Plasmodium vivax]
Length = 539
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/409 (47%), Positives = 288/409 (70%), Gaps = 8/409 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E +F+EL + +E++++ E +GWK P+ IQ + +P A + +D+IGL++TGSGKT F +P
Sbjct: 130 EGASFRELNICEEILQSIEELGWKKPTAIQRKMLPFAFQKRDIIGLSETGSGKTACFIIP 189
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ L E + +FFA V+SPTREL IQI++ F+ALGS + + + GGVD++ Q
Sbjct: 190 ILQELREKRQ------SFFALVISPTRELCIQIAQHFQALGSNLLINICTIFGGVDIVTQ 243
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+L L K+P+I+V+TPGR++DHL NTKGF+L LKYLV DEAD+LL+ DFE S++++L ++
Sbjct: 244 SLNLAKKPNIIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSLDFEASINKLLLIL 303
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P R T+LFSATMTK V KL++A LKNP+ +E +SKYST TL + Y F+P KYK YL
Sbjct: 304 PEKRITFLFSATMTKSVAKLKKASLKNPITVEVSSKYSTASTLIENYIFIPLKYKYTYLC 363
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ S+ S ++F TC + + RNLG ++I + G ++Q++RL +LN FK+ N
Sbjct: 364 SLCFHFSSRSIIIFANTCATAQKINFFCRNLGLKSICLHGKLTQNQRLSSLNSFKSKRYN 423
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
ILI T V +RGLD+ + +VIN+D+ + K+YIHRVGRTARAGRTG +I+ V QY++E +
Sbjct: 424 ILISTQVGARGLDLKDIRIVINFDL-CSCKEYIHRVGRTARAGRTGKSITFVTQYDVESF 482
Query: 366 LQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
L IEK++ KK+ +F +E + LL E+ EA R++ +K++ + RR
Sbjct: 483 LAIEKMLNKKIDKFSELDENDALLYHEQTVEALRLADTEMKENQDLYRR 531
>gi|320168199|gb|EFW45098.1| DEAD box polypeptide 49 [Capsaspora owczarzaki ATCC 30864]
Length = 611
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/418 (50%), Positives = 266/418 (63%), Gaps = 7/418 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL+ LV+ CE +G K P+ IQ I H L G+++IG A+TGSGKT AFALPIL
Sbjct: 179 TFAALGLKQWLVKQCEAMGLKHPTDIQVNTIKHVLAGRNVIGCAKTGSGKTAAFALPILH 238
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + FA VL+PTRELA QI+EQF ALG GI+LR AV+VGGVDMMQQ+L
Sbjct: 239 RLSDDPYGP------FAVVLTPTRELAFQIAEQFRALGKGINLREAVVVGGVDMMQQSLV 292
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR- 187
L KRPH+++ATPGRL DHL + SL ++LVLDEADRLL + F L+ IL
Sbjct: 293 LAKRPHVIIATPGRLADHLNSNSQLSLARARFLVLDEADRLLEEGFSPDLNRILAAASNP 352
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT LFSAT+TK + L+ + N V E S +TV TL Q++ PAK KDCYL Y+
Sbjct: 353 QRQTLLFSATITKNIANLESMSMSNVVHYETKSSVATVTTLDQRFVITPAKVKDCYLSYL 412
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S +VFT +C + M++ LG R + + MSQS RLG+L KFK+ NIL
Sbjct: 413 LGQHEDKSIIVFTSSCRNCETITRMIKALGFRCVALHSEMSQSMRLGSLAKFKSSIVNIL 472
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TDVASRGLDIP+V +VIN D+P S DY+HRVGRTARAGR G+A++ V QY++E
Sbjct: 473 IATDVASRGLDIPTVKLVINNDVPRTSTDYVHRVGRTARAGRGGMAVTFVTQYDIELIQH 532
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 425
IE I KL +E+ L+ L VT AKR + M + + RR+ E D+ R
Sbjct: 533 IESKIKVKLSALTMDEDAALVNLNDVTTAKRTAIMEMAEENFGERRRRNLEKQDMHRN 590
>gi|390371036|dbj|GAB64917.1| DEAD/DEAH box helicase [Plasmodium cynomolgi strain B]
Length = 525
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/409 (47%), Positives = 289/409 (70%), Gaps = 15/409 (3%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E TF++L + +E++++ + +GWK P+ IQ + +P+A + +D+IGL++TGSGKT F +P
Sbjct: 123 ERATFRDLNICEEILQSIDELGWKKPTAIQRKMLPYAFQKRDIIGLSETGSGKTACFIIP 182
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ L E + +FFA V+SPTREL IQI++ F+ALGS + + + GGVD++ Q
Sbjct: 183 ILQELREKRQ------SFFALVISPTRELCIQIAQHFQALGSNLLVNICTIFGGVDIVTQ 236
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+L L KRP+I+V+TPGR++DHL NTKGF+L LKYLV DEAD+LL+ DFE S++++L ++
Sbjct: 237 SLNLAKRPNIIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSLDFEASINKLLLIL 296
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P R T+LFSATMTK V KL++A LKNP+K+E ++KYST TL + Y F+P KYK YL
Sbjct: 297 PEKRITFLFSATMTKSVAKLKKASLKNPIKVEVSNKYSTASTLIENYLFIPLKYKYTYLC 356
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ S ++F TC + + RNLG ++I + G ++Q++RL +LN FK+ N
Sbjct: 357 SL-------SIIIFANTCATAQKINFFCRNLGLKSICLHGKLTQNQRLSSLNSFKSNRYN 409
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
ILI T V +RGLD+ + +VIN+D+ + K+YIHRVGRTARAGRTG +I+ V QY++E +
Sbjct: 410 ILISTQVGARGLDLKDIKIVINFDL-CSCKEYIHRVGRTARAGRTGKSITFVTQYDVENF 468
Query: 366 LQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
L IEK++ KK+ +F +E +VLL E+ EA R++ +K++ + RR
Sbjct: 469 LSIEKMLNKKIDKFSEFDENDVLLYHEQTVEALRLADTEMKENQDLYRR 517
>gi|146104251|ref|XP_001469775.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|398024294|ref|XP_003865308.1| DEAD box RNA helicase, putative [Leishmania donovani]
gi|134074145|emb|CAM72887.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|322503545|emb|CBZ38631.1| DEAD box RNA helicase, putative [Leishmania donovani]
Length = 527
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/410 (49%), Positives = 277/410 (67%), Gaps = 5/410 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + KTF++LGL EL AC + GW+ P++IQA AI EG+DLIG+AQTGSGKTGA+
Sbjct: 48 EEFKTKTFQDLGLCQELCTACADAGWQHPTRIQASAITVFAEGRDLIGVAQTGSGKTGAY 107
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP++ LL QR P V+ PTRELA Q++ QF LG + LR A LVGG DM
Sbjct: 108 ALPLVNWLLA----QRKTPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADM 163
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
++Q L KRPH+VV TPGR+ DHL+NTKGF L L LVLDEAD++L+ D+EK +D IL
Sbjct: 164 VEQACELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMDYEKEIDAIL 223
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P+ R+T LFSAT++ K+ +LQ+A L++PV ++ K +TVDTLKQ Y F P
Sbjct: 224 EQLPQNRRTMLFSATLSTKIDRLQKASLRDPVLLQVHRKNTTVDTLKQYYIFAPFAQMLS 283
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT+ + + ++F R+ + L LR LG RA+P+ G M QS R AL KFK G
Sbjct: 284 YLHLFLTKETGNHILIFCRSAALVHKITLTLRILGHRALPLMGRMDQSNRNIALTKFKEG 343
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRTARAG G A++L++QY++
Sbjct: 344 KVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRTARAGAEGKAVNLISQYDI 403
Query: 363 EWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+IE+ G K E+P E EV L+L+RV +A++ + I++ +R
Sbjct: 404 VLLQKIEQQTGVKCVEYPFLPESEVQLVLQRVEDAEQEAIREIREDAEER 453
>gi|170099199|ref|XP_001880818.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644343|gb|EDR08593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 449
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/423 (49%), Positives = 289/423 (68%), Gaps = 21/423 (4%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIG--------LAQTGSG 57
E KTF ELG+ L++A E + TP++IQ IP A+ G+D+IG +A TGSG
Sbjct: 2 ETKTFAELGICAPLLQALEELKHTTPTEIQTGCIPQAIAGRDVIGSVWKLVIGIAPTGSG 61
Query: 58 KTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLV 117
KT AFA+PIL L + + +FACVLSPTRELA QIS QFEALG+ + +R V+V
Sbjct: 62 KTLAFAIPILHRLWDNPQ------GYFACVLSPTRELAYQISAQFEALGAAMGVRSVVIV 115
Query: 118 GGVD-MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEK 176
GG D +QQ + L ++PHI+VATPGRL DHL + L VLDEADRLL+ DF++
Sbjct: 116 GGDDDRVQQAVQLAQKPHIIVATPGRLHDHLNFHTTQPIIHLGLQVLDEADRLLDLDFQR 175
Query: 177 SLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYSTVDTLKQQYRFV 235
+ EI+ IP+ R TYLFSATMT V KLQRA L +PV+++A+ +Y+TV TL Q Y
Sbjct: 176 EITEIMQSIPKERCTYLFSATMTANVSKLQRASLSDPVRVDASLFRYTTVSTLLQHYLLC 235
Query: 236 PAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
P K+ LVY++ ++ + +VF RT + L+++LR+LG A+P+ G ++QS+RLG
Sbjct: 236 PLVEKEVTLVYLINSLAQNLIIVFVRTVADAKCLSIILRSLGFEAVPLHGELTQSQRLGV 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
+FK+G+ IL+ TDVASRGLD+P+VD+VINYD+PT+SKDYIHRVGRTARAGR G +I
Sbjct: 296 FTRFKSGKSRILVATDVASRGLDVPNVDVVINYDVPTHSKDYIHRVGRTARAGRAGKSIL 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGNK 410
+V QY+ E L++EK++ +KL +P + +E+ LL ERV EA R+++ + + G K
Sbjct: 356 MVTQYDAELMLRLEKVLNRKLDLYPTDLQEIALLKERVVEAGRLARNQLNEESKARGGGK 415
Query: 411 RRR 413
+RR
Sbjct: 416 KRR 418
>gi|401420084|ref|XP_003874531.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490767|emb|CBZ26031.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 527
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 277/410 (67%), Gaps = 5/410 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + KTF++LGL +EL AC GW+ P++IQA AI EG+DLIG+AQTGSGKTGA+
Sbjct: 48 EEFKAKTFQDLGLCEELCSACAEAGWQHPTRIQASAITVFAEGRDLIGVAQTGSGKTGAY 107
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP++ LL QR P V+ PTRELA Q++ QF LG + LR A LVGG DM
Sbjct: 108 ALPLVNWLL----TQRKTPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADM 163
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
++Q L KRPH++V TPGR+ DHL+NTKGF L L LVLDEAD++L+ D+EK +D IL
Sbjct: 164 VEQACELSKRPHVIVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMDYEKEIDAIL 223
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P+ R+T LFSAT++ K+ +LQ+A L +PV ++ K +TVDTLKQ Y F P
Sbjct: 224 EQLPQDRRTMLFSATLSTKIDRLQKASLLDPVLLQVHRKNTTVDTLKQYYIFAPFAQMLS 283
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT+ + + ++F R+ + L LR LG RA+P+ G M QS R AL KFK G
Sbjct: 284 YLHLFLTKETGNHILIFCRSAALVHKITLALRILGHRALPLMGRMDQSNRNIALTKFKEG 343
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRTARAG G A++L++QY++
Sbjct: 344 KVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRTARAGAEGKAVNLISQYDI 403
Query: 363 EWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+IE+ G K E+P+ E EV L+L+RV +A++ + I++ +R
Sbjct: 404 VLLQKIEQQTGVKCVEYPSLAESEVQLVLQRVEDAEQEAIREIREDAEER 453
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 273/409 (66%), Gaps = 11/409 (2%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
KE+ TF+ LGL D LV AC+ +G K P+ +Q +P L GKD+ GLAQTGSGKT AFAL
Sbjct: 41 KEITTFEGLGLTDWLVRACKELGMKRPTLVQQGCVPQILAGKDVFGLAQTGSGKTAAFAL 100
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ L AEN V FA VL+PTRELA QIS+QF+ALGS ++LR V+VGG+DM
Sbjct: 101 PILQKL---AENPYGV---FALVLTPTRELAFQISDQFKALGSEVNLRSTVVVGGMDMTT 154
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEIL 182
Q AL +RPHIV+ATPGRL DH N G KYLVLDEADRL++ FE L +
Sbjct: 155 QAKALMQRPHIVIATPGRLRDHFMNDPGIPDVFAKAKYLVLDEADRLMDVGFESELRSVF 214
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P RQT LFSATMT +K L L + + TV+ L+QQY PA KD
Sbjct: 215 ETMPSNRQTLLFSATMTSNLKALHDLSLDKAFFYQQYEGFKTVEALQQQYILTPANVKDV 274
Query: 243 YLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
YL++I++ E S ++F +C LL+LM+ L + +Q +RL +L++F
Sbjct: 275 YLMHIMSTLEERKIRSVIIFASSCRTCHLLSLMMSELEVDTTALHSMKTQQQRLASLSRF 334
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
K+G+ +ILI TDVASRGLDIP+VD+VINYDIP ++DY+HRVGRTARAGR G A+SL+ Q
Sbjct: 335 KSGQVSILIATDVASRGLDIPTVDLVINYDIPRFTRDYVHRVGRTARAGRGGSAVSLITQ 394
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
Y+++ IE+L+GKKL E+ +E++VL + +V +AKR++ + I DSG
Sbjct: 395 YDVQLVQDIEELLGKKLEEYELDEDKVLKSITKVYKAKRVAMLKIVDSG 443
>gi|407927370|gb|EKG20264.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 363
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/335 (57%), Positives = 258/335 (77%), Gaps = 2/335 (0%)
Query: 83 FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGR 142
F +++PTRELA QIS+QFEALGS I ++CAVLVGG+DM Q +ALGK PHI+VATPGR
Sbjct: 7 LFGLIMAPTRELAYQISQQFEALGSLIGVKCAVLVGGMDMTPQQIALGKNPHIIVATPGR 66
Query: 143 LMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKK 201
L+DHL NTKGFSL LKYLV+DEADRLL+ DF +D+IL V+P+ R+TYLFSATM+ K
Sbjct: 67 LLDHLENTKGFSLKQLKYLVMDEADRLLDLDFGPIIDKILKVLPKEGRRTYLFSATMSSK 126
Query: 202 VKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFT 260
V+ LQRA L NP+++ ++S + TV TL Q + FVP K+KD YL+++L ++ T++FT
Sbjct: 127 VESLQRASLSNPLRVSISSSSHQTVSTLIQHFLFVPHKHKDLYLIHLLNDMIGHPTIIFT 186
Query: 261 RTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIP 320
RT + T+ +A++LR LG AIP+ G +SQS RLGAL KFKA +IL+ TDVA+RGLDIP
Sbjct: 187 RTVNETQRIAILLRALGFGAIPLHGQLSQSARLGALGKFKAKTRDILVATDVAARGLDIP 246
Query: 321 SVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP 380
SV VINYD+P +SK Y+HRVGRTARAG++G A+S+V QY++E +L+IE +GKK+ E P
Sbjct: 247 SVSYVINYDLPPDSKTYVHRVGRTARAGKSGKAVSIVTQYDVEIWLRIETALGKKVDEEP 306
Query: 381 AEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+EEV++L ERV EA+R + +KD R +KG
Sbjct: 307 VVKEEVMVLAERVGEAQRAAIREMKDLHENRGKKG 341
>gi|157876834|ref|XP_001686759.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
gi|68129834|emb|CAJ09140.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
Length = 527
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/410 (49%), Positives = 277/410 (67%), Gaps = 5/410 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + KTF++LGL EL AC + GW+ P++IQA I EG+DLIG+AQTGSGKTGA+
Sbjct: 48 EEFKAKTFQDLGLCQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAY 107
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP++ LL QR P V+ PTRELA Q++ QF LG + LR A LVGG DM
Sbjct: 108 ALPLVNWLLA----QRKTPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADM 163
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
++Q L KRPH+VV TPGR+ DHL+NTKGF L L LVLDEAD++L+ ++EK +D IL
Sbjct: 164 VEQACELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMNYEKEIDAIL 223
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P+ R+T LFSAT++ K+ +LQ+A L++PV ++ K +TVDTLKQ Y F P
Sbjct: 224 EQLPQNRRTMLFSATLSTKIDRLQKASLRDPVLLQVHRKNTTVDTLKQYYIFAPFAQMLS 283
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT+ + + ++F R+ + L LR LG RA+P+ G M QS R AL KFK G
Sbjct: 284 YLHLFLTKETGNHILIFCRSAALVHKITLTLRILGHRALPLMGRMDQSNRNIALTKFKEG 343
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRTARAG G A++L++QY++
Sbjct: 344 KVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRTARAGAEGKAVNLISQYDI 403
Query: 363 EWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+IE+ G K E+P+ E EV L+L+RV +A++ + I++ +R
Sbjct: 404 VLLQKIEQQTGVKCVEYPSLPESEVQLVLQRVEDAEQEAIREIREDAEER 453
>gi|154345774|ref|XP_001568824.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066166|emb|CAM43956.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 527
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/410 (49%), Positives = 275/410 (67%), Gaps = 5/410 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + KTFK+LGL EL AC GW+ P++IQA I EG+DLIG+AQTGSGKTGA+
Sbjct: 48 EEFKTKTFKDLGLCRELCMACAEAGWQHPTRIQASTITVVAEGRDLIGVAQTGSGKTGAY 107
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP++ LL Q P V+ PTRELA Q++ QF LG + LR A LVGG DM
Sbjct: 108 ALPLVNWLL----TQPKTPYLSVLVMVPTRELAQQVTAQFLLLGRSVGLRVATLVGGADM 163
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
++Q L KRPH++V TPGR+ DHL+NTKGF L L LVLDEAD++L+ D+EK +D IL
Sbjct: 164 VEQACELSKRPHVIVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMDYEKEIDAIL 223
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P+ R+T LFSAT++ KV +LQ+A L++PV ++ K +TVDTLKQ Y F P
Sbjct: 224 EQLPQDRRTMLFSATLSTKVDRLQKASLRDPVLLQVHRKNTTVDTLKQYYIFAPFAQMLS 283
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT+ + + ++F R+ + L LR LG RA+P+ G M QS R AL KFK G
Sbjct: 284 YLHLFLTKETGNHILIFCRSAALVHRITLALRTLGHRALPLMGRMDQSNRNIALTKFKEG 343
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRTARAG G A++L++QY++
Sbjct: 344 KVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRTARAGAEGKAVNLISQYDI 403
Query: 363 EWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+IE+ G K E+P+ E EV L+L+RV +A++ + I++ +R
Sbjct: 404 VLLQKIEQQTGVKCVEYPSLPESEVQLVLQRVEDAEQEAIREIREDAGER 453
>gi|225681661|gb|EEH19945.1| ATP-dependent rRNA helicase rrp3 [Paracoccidioides brasiliensis
Pb03]
Length = 469
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/417 (53%), Positives = 287/417 (68%), Gaps = 26/417 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+FK+LG+ D L EACE +G+KTP+ IQ EAIP AL+G+DLIGLA+TGSGKT AF
Sbjct: 51 EETATKSFKDLGVIDSLCEACEALGYKTPTPIQTEAIPLALQGRDLIGLAETGSGKTAAF 110
Query: 63 ALPILQA--LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
ALPILQ L + PA P + A CAV+VGG+
Sbjct: 111 ALPILQGELLSFLLRTHWGNPAN-----DPLSQSA-----------------CAVIVGGM 148
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSL-GTLKYLVLDEADRLLNDDFEKSLD 179
DM+ Q +ALGK TPGRL+DHL NTKGFS T LV+DEADRLL+ DF LD
Sbjct: 149 DMVPQAIALGKETSHHRRTPGRLLDHLENTKGFSPPATSNTLVMDEADRLLDLDFGPILD 208
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAK 238
+IL V+PR R+TYL SATM+ KV+ LQRA L NP+++ ++SKY TV TL Q + F+P K
Sbjct: 209 KILKVLPRERRTYLLSATMSSKVESLQRASLSNPLRVSISSSKYQTVSTLLQTFLFIPHK 268
Query: 239 YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
YKD YLVY+L E + S ++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL K
Sbjct: 269 YKDIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSYRLGALGK 328
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
F++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGRTARAG++G A S V
Sbjct: 329 FRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRTARAGKSGHAFSFVT 388
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
QY+LE +L+IE + KKL E+ E+EEV++L +RV EA+R + +K+ R KG
Sbjct: 389 QYDLEVWLRIENALDKKLEEYKVEKEEVMVLSDRVGEAQRHAITEMKNLHENRGTKG 445
>gi|405961989|gb|EKC27711.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
gi|405977898|gb|EKC42325.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
Length = 464
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/426 (48%), Positives = 283/426 (66%), Gaps = 20/426 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++LGL + L C N+G + P+ IQ IP LEGKD IG A+TGSGKT AFALPILQ
Sbjct: 18 FEKLGLNEWLWTQCHNMGLRQPTPIQVNCIPPILEGKDCIGCAKTGSGKTAAFALPILQK 77
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E FA VL+PTRELA QI+EQF LG I++R V+ GG+DMMQQ + L
Sbjct: 78 LSEDPF------GIFALVLTPTRELAFQIAEQFNVLGKPINVRVTVITGGLDMMQQGIDL 131
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+PHIV++TPGRL DHL + FSL +K+LVLDEADRL+ DDF + L+ I V+P+ R
Sbjct: 132 QVKPHIVISTPGRLADHLQSCDTFSLRKIKFLVLDEADRLIEDDFGEQLETIFKVLPKKR 191
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL- 248
QT LFSATMTK +K LQ + P + S+ +TV+ LKQ Y +PA KD YL+ IL
Sbjct: 192 QTLLFSATMTKHLKDLQDVAMNKPFFWQQKSEVATVEGLKQYYVLMPADIKDAYLMQILD 251
Query: 249 --TEVS-ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
TE++ SS M+FT TC T++L ++ LG + + + Q +RL AL KFK+ + N
Sbjct: 252 KYTEINKKSSIMIFTNTCKYTQILGMVCTQLGLPCVVLHSMIRQKERLAALAKFKSNQIN 311
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
ILI TDVASRGLDIP+VD++IN+++P KDY+HRVGRTARAGR G AI+LV Q+++
Sbjct: 312 ILIATDVASRGLDIPTVDLIINHNVPNKPKDYVHRVGRTARAGRCGTAITLVTQFDVRLV 371
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI--KDSG-----NKRRR---KG 415
IE+ + K+ E+ +E++V+ +L V AKR +++ + +D G NKR++ +G
Sbjct: 372 HAIEEFVNSKMEEYDTKEKDVMKILVEVATAKREAEIRLDERDFGVQKEINKRKKLLMEG 431
Query: 416 GDEDDD 421
D D++
Sbjct: 432 KDPDEE 437
>gi|407849139|gb|EKG03976.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 511
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/404 (49%), Positives = 264/404 (65%), Gaps = 7/404 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + +FK LGL +EL+ AC GW+ P++IQA IP EG+D+IG+AQTGSGKTGA+
Sbjct: 32 EESKCTSFKALGLCEELISACAEAGWQNPTRIQAATIPVVKEGRDIIGVAQTGSGKTGAY 91
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LP++ LL Q VP V+ PTRELA Q++ QF LG + LR A LVGG DM
Sbjct: 92 VLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVMLGHSVGLRVATLVGGADM 147
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L KRPH+VV TPGR+ DHL NTKGF L L LVLDEAD++L+ D+EK +D IL
Sbjct: 148 VDQACELSKRPHVVVGTPGRIKDHLQNTKGFKLVKLHALVLDEADKMLDMDYEKEIDAIL 207
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P RQT LFSAT+ K+ +LQ+A L +PV +E K +TVDTLKQ Y F P
Sbjct: 208 EHLPHSRQTMLFSATLNTKIDRLQKASLNDPVLLEVHRKNTTVDTLKQYYVFCPFAQMLS 267
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT + + +VF R+ + L LR LG +A+P+ G M Q+ R AL KFK G
Sbjct: 268 YLHLYLTRETGNHILVFCRSAALVHRITLTLRILGHQALPLMGRMDQTNRNIALTKFKEG 327
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ IL+CTDVA RGLDI D+V+NY +P +DYIHRVGRTARAG G A+++++QY++
Sbjct: 328 KIRILVCTDVAQRGLDISHTDVVVNYALPDRVEDYIHRVGRTARAGAQGKAVNIISQYDI 387
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+IE G K E+P +E +V +L+RV +A+ Q TIK+
Sbjct: 388 LLLQRIEATTGVKCEEWPVQEGDVAAVLQRVEDAE---QETIKE 428
>gi|71665094|ref|XP_819521.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70884825|gb|EAN97670.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 511
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/404 (49%), Positives = 264/404 (65%), Gaps = 7/404 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + +FK LGL +EL+ AC GW+ P++IQA IP EG+D+IG+AQTGSGKTGA+
Sbjct: 32 EESKCTSFKALGLCEELISACAEAGWQNPTRIQAATIPVVKEGRDIIGVAQTGSGKTGAY 91
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LP++ LL Q VP V+ PTRELA Q++ QF LG + LR A LVGG DM
Sbjct: 92 VLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVMLGHSVGLRVATLVGGADM 147
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L KRPH+VV TPGR+ DHL NTKGF L L LVLDEAD++L+ D+EK +D IL
Sbjct: 148 VDQACELSKRPHVVVGTPGRIKDHLQNTKGFQLVKLHALVLDEADKMLDMDYEKEIDAIL 207
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P RQT LFSAT+ K+ +LQ+A L +PV +E K +TVDTLKQ Y F P
Sbjct: 208 EHLPHSRQTMLFSATLNTKIDRLQKASLNDPVLLEVHRKNTTVDTLKQYYVFCPFAQMLP 267
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT + + +VF R+ + L LR LG +A+P+ G M Q+ R AL KFK G
Sbjct: 268 YLHLYLTRETGNHILVFCRSAALVHRITLTLRILGHQALPLMGRMDQTNRNIALTKFKEG 327
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ IL+CTDVA RGLDI D+V+NY +P +DYIHRVGRTARAG G A+++++QY++
Sbjct: 328 KVRILVCTDVAQRGLDISHTDVVVNYALPDRVEDYIHRVGRTARAGAQGKAVNIISQYDI 387
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+IE G K E+P +E +V +L+RV +A+ Q TIK+
Sbjct: 388 LLLQRIEATTGVKCEEWPVQEGDVAAVLQRVEDAE---QETIKE 428
>gi|68071817|ref|XP_677822.1| RNA helicase [Plasmodium berghei strain ANKA]
gi|56498080|emb|CAH95521.1| RNA helicase, putative [Plasmodium berghei]
Length = 499
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/407 (45%), Positives = 289/407 (71%), Gaps = 8/407 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+E KE+ +F +L + +E++++ + +GW+ P+ IQ + +P + +D+IGL++TGSGKT
Sbjct: 87 SETKEITSFSQLNICEEILQSIQELGWEKPTLIQQKVLPLMFQKRDIIGLSETGSGKTAC 146
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
F +PILQ L +N FFA ++SPTREL IQI++ +ALGS + + + GGVD
Sbjct: 147 FIIPILQELKLKKQN------FFALIISPTRELCIQIAQNAQALGSNLLINICTIFGGVD 200
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
++ Q+L L K+P+I+++TPGR++DHL NTKGF+L LKYLV DEAD+LL+ DFE S++++
Sbjct: 201 IVTQSLNLAKKPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSLDFESSINKL 260
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L ++P+ R T+LFSATMTK V KL++ LKNP+KIE ++KYSTV TL + Y F+P KYK
Sbjct: 261 LLILPKNRITFLFSATMTKSVAKLKKTSLKNPIKIEVSNKYSTVKTLIENYIFLPLKYKY 320
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL + + + ++F+ TC + L RNLG ++I + G ++Q++RL +LN FK
Sbjct: 321 TYLCSLCFYYTNKNIIIFSNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNLFKT 380
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+ NILI T V +RGLD+ ++ +VIN+D+ + K+YIHRVGRTARAG+TG +I+ V QY+
Sbjct: 381 NKYNILISTQVGARGLDLQNIKIVINFDLCS-CKEYIHRVGRTARAGKTGKSITFVTQYD 439
Query: 362 LEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKDS 407
+E +L IEK + KK+ +F +E +VL+ + EA R+S++ +K++
Sbjct: 440 VETFLTIEKQLNKKIDKFTDIDEHDVLVYHNQALEALRLSEIEMKEN 486
>gi|149235261|ref|XP_001523509.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060561|sp|A5E6W6.1|RRP3_LODEL RecName: Full=ATP-dependent rRNA helicase RRP3
gi|146452918|gb|EDK47174.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/412 (49%), Positives = 283/412 (68%), Gaps = 12/412 (2%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
V++F E L EL+E+ +++ + P+ IQA AIPHAL+GKD++G+A+TGSGKT AFA+PI
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LQ L A+ ++A VL+PTRELA QI E F+ALGS + LR ++GG+ MM+Q
Sbjct: 157 LQTLYTAAQ------PYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQA 210
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L ++PH+++ATPGRL+DHL +TKGFSL L+YLV+DE DR+++ D+ K++D+IL IP
Sbjct: 211 RDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIP 270
Query: 187 -RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYL++ATM+++++K +R+ L +PV++E D LKQ KD L+
Sbjct: 271 SHQRITYLYTATMSREIEKFKRS-LNSPVQVEIVKLEKVPDKLKQTMCLTSPNTKDTRLI 329
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
I+ S ++FTRT TR LML NLG + + + G M QS+RLGA+NKFKAG
Sbjct: 330 QIVNLDSMKRVIIFTRTVVHTRRCCLMLLNLGFKCVELHGQMPQSRRLGAINKFKAG-TP 388
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIP+VD+VINYDIP + YIHRVGRTARAG+ G AISLV QY+LE Y
Sbjct: 389 ILVATDVAARGLDIPAVDLVINYDIP-DPTLYIHRVGRTARAGKAGKAISLVTQYDLESY 447
Query: 366 LQIEKLIGKKLP--EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
L+IE +G KLP + P +E + L + +K I + +++ NK R +G
Sbjct: 448 LRIENTLGTKLPKEDLPLDEMQGLQVSVDRALSKAIQMLRNEENDNKLRHRG 499
>gi|407409724|gb|EKF32444.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 512
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/404 (49%), Positives = 263/404 (65%), Gaps = 7/404 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + +FK LGL +EL+ C GW+ P++IQA IP EG+D+IG+AQTGSGKTGA+
Sbjct: 32 EESKGTSFKALGLCEELISVCAEAGWQNPTRIQAATIPVVKEGRDIIGVAQTGSGKTGAY 91
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LP++ LL Q VP V+ PTRELA Q++ QF LG + LR A LVGG DM
Sbjct: 92 VLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVMLGHSVGLRVATLVGGADM 147
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L KRPH+VV TPGR+ DHL NTKGF L L LVLDEAD++L+ D+EK +D IL
Sbjct: 148 VDQACELSKRPHVVVGTPGRIKDHLQNTKGFQLVKLHALVLDEADKMLDMDYEKEIDAIL 207
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P RQT LFSAT+ K+ +LQ+A L +PV +E K +TVDTLKQ Y F P
Sbjct: 208 EHLPHSRQTMLFSATLNTKIDRLQKASLNDPVLLEVHRKNTTVDTLKQYYVFCPFAQMLP 267
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT + + +VF R+ + L LR LG +A+P+ G M Q+ R AL KFK G
Sbjct: 268 YLHLYLTRETGNHILVFCRSAALVHRITLTLRILGHQALPLMGRMDQTNRNIALTKFKEG 327
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ IL+CTDVA RGLDI D+V+NY +P +DYIHRVGRTARAG G A+++++QY++
Sbjct: 328 KVRILVCTDVAQRGLDISHTDVVVNYALPDRVEDYIHRVGRTARAGAQGKAVNIISQYDI 387
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+IE G K E+P +E +V +L+RV +A+ Q TIK+
Sbjct: 388 LLLQRIEATTGVKCEEWPLQEGDVAAVLQRVEDAE---QETIKE 428
>gi|82915130|ref|XP_728973.1| DEAD/DEAH box helicase [Plasmodium yoelii yoelii 17XNL]
gi|23485712|gb|EAA20538.1| DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
Length = 517
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/407 (44%), Positives = 290/407 (71%), Gaps = 8/407 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AE+ E+ +F++L + +E++++ + +GW+ P+ IQ + +P + +D+IGL++TGSGKT
Sbjct: 102 AEQNEITSFEQLNICEEVLQSIKELGWEKPTLIQQKVLPIVFQKRDIIGLSETGSGKTAC 161
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
F +PILQ L + +FFA ++SPTREL IQI++ +ALGS + + + GGVD
Sbjct: 162 FIIPILQEL------KIKKQSFFALIISPTRELCIQIAQNAQALGSNLLINICTIFGGVD 215
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
++ Q+L L K+P+I++ TPGR++DHL NTKGF+L LKYL+ DEAD+LL+ DFE S++++
Sbjct: 216 IVTQSLNLAKKPNIIIGTPGRILDHLNNTKGFNLKNLKYLIFDEADKLLSLDFESSINKL 275
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L ++P+ R T+LFSATMTK V KL++A LKNP++I+ ++KYSTV TL + Y F+P KYK
Sbjct: 276 LLILPKNRITFLFSATMTKSVSKLKKASLKNPIQIQVSNKYSTVKTLIETYIFLPLKYKY 335
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL + + + ++F+ TC + L RNLG ++I + G ++Q++RL +LN FK
Sbjct: 336 TYLCSLCFYFTNKNIIIFSNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNLFKT 395
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+ NILI T V +RGLD+ ++ +VIN+D+ + K+YIHRVGRTARAG+TG +I+ V QY+
Sbjct: 396 NKYNILISTQVGARGLDLKNIKIVINFDLCS-CKEYIHRVGRTARAGKTGKSITFVTQYD 454
Query: 362 LEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKDS 407
+E +L IEK + KK+ +F +E +VL+ + EA R+S++ +K++
Sbjct: 455 VETFLTIEKQLNKKIDKFTDIDEHDVLMYHNQTLEALRLSELEMKEN 501
>gi|70945861|ref|XP_742705.1| RNA helicase [Plasmodium chabaudi chabaudi]
gi|56521835|emb|CAH78029.1| RNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 483
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/399 (46%), Positives = 282/399 (70%), Gaps = 8/399 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E+ E+ +F +L + +E++++ + +GW+ P+ IQ + +P + +D+IGL++TGSGKT F
Sbjct: 92 EQNEITSFSQLNICEEVLQSIKELGWEKPTLIQQKVLPLVFQKRDIIGLSETGSGKTACF 151
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+PILQ L + +FFA ++SPTREL IQI++ +ALGS + + + GGVD+
Sbjct: 152 IIPILQEL------KYKKQSFFALIISPTRELCIQIAQNAQALGSNLLINICTIFGGVDI 205
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+L L K+P+I+++TPGR++DHL NTKGF+L LKYLV DEAD+LL+ DFE S++++L
Sbjct: 206 VTQSLNLAKKPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSLDFESSINKLL 265
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
++P R T+LFSATMTK V KL++A LKNP+KIE ++KYSTV TL + Y F+P KYK
Sbjct: 266 LILPNNRITFLFSATMTKSVAKLKKASLKNPIKIEVSNKYSTVKTLIETYIFLPLKYKYT 325
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL + + + ++FT TC + L RNLG ++I + G ++Q++RL +LN FK
Sbjct: 326 YLCSLCFYFTNKNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNLFKTN 385
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ NILI T V +RGLD+ ++ +VIN+D+ + K+YIHRVGRTARAG+TG +I+ V QY++
Sbjct: 386 KYNILISTQVGARGLDLQNIKIVINFDLCS-CKEYIHRVGRTARAGKTGKSITFVTQYDV 444
Query: 363 EWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRIS 400
E +L IEK + KK+ +F +E +VL+ + EA R+S
Sbjct: 445 EAFLTIEKQLNKKIDKFTDIDEHDVLVYHTQALEALRLS 483
>gi|71747632|ref|XP_822871.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832539|gb|EAN78043.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 512
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/434 (46%), Positives = 272/434 (62%), Gaps = 17/434 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + TFK LGL +EL+ AC+ GW+ P++IQ IP EG+D+IG+AQTGSGKTGA+
Sbjct: 35 EESKDVTFKSLGLCEELIGACKEAGWRMPTRIQVATIPVVSEGRDIIGVAQTGSGKTGAY 94
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LP++ LL Q VP V+ PTRELA Q++ QF LGS + LR A LVGG DM
Sbjct: 95 VLPLVNWLL----TQAKVPYLSILVMVPTRELAQQVAAQFVMLGSSVGLRVATLVGGADM 150
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L +RPH+VV TPGR+ DHL NTKGF L L LVLDEAD++L D+EK ++ IL
Sbjct: 151 VDQACELSRRPHVVVGTPGRVKDHLNNTKGFQLVKLHALVLDEADKMLEMDYEKEINAIL 210
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P RQT LFSAT++ K+ +LQ A L +PV +E K +TVDTLKQ Y F P
Sbjct: 211 EHLPHNRQTLLFSATLSTKIDRLQNASLNDPVLLEVHRKNTTVDTLKQYYVFAPFAQMLP 270
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT S + +VF R+ + L LR LG +A+P+ G M Q R AL KFK G
Sbjct: 271 YLHLYLTRESGNHILVFCRSAALVHRITLTLRVLGHQALPLMGRMDQKNRNIALTKFKEG 330
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRTARAG G A+++++QY++
Sbjct: 331 RVRILVCTDVAQRGLDIPRTDVVVNFALPDRVEDYIHRVGRTARAGAQGKAVNIISQYDI 390
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK------------ 410
++E G K E+P + +V +L+RV +A++ + +++S +
Sbjct: 391 VLLQKVEASTGVKCEEWPISDGDVAAVLQRVEDAEQEAVKEMRESDQEAKFEREARQLTT 450
Query: 411 -RRRKGGDEDDDIG 423
RR K D+D+G
Sbjct: 451 ARRAKRERGDNDMG 464
>gi|261332683|emb|CBH15678.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 512
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/434 (46%), Positives = 272/434 (62%), Gaps = 17/434 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + TFK LGL +EL+ AC+ GW+ P++IQ IP EG+D+IG+AQTGSGKTGA+
Sbjct: 35 EESKDVTFKSLGLCEELIGACKEAGWRMPTRIQVATIPVVSEGRDIIGVAQTGSGKTGAY 94
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LP++ LL Q VP V+ PTRELA Q++ QF LGS + LR A LVGG DM
Sbjct: 95 VLPLVNWLL----TQAKVPYLSILVMVPTRELAQQVAAQFVMLGSSVGLRVATLVGGADM 150
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L +RPH+VV TPGR+ DHL NTKGF L L LVLDEAD++L D+EK ++ IL
Sbjct: 151 VDQACELSRRPHVVVGTPGRVKDHLNNTKGFQLVKLHALVLDEADKMLEMDYEKEINAIL 210
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P RQT LFSAT++ K+ +LQ A L +PV +E K +TVDTLKQ Y F P
Sbjct: 211 EHLPHNRQTLLFSATLSTKIDRLQNASLNDPVLLEVHRKNTTVDTLKQYYVFAPFAQMLP 270
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL LT S + +VF R+ + L LR LG +A+P+ G M Q R AL KFK G
Sbjct: 271 YLHLYLTRESGNHILVFCRSAALVHRITLTLRVLGHQALPLMGRMDQKNRNIALTKFKEG 330
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRTARAG G A+++++QY++
Sbjct: 331 RVRILVCTDVAQRGLDIPRTDVVVNFALPDRVEDYIHRVGRTARAGAQGKAVNIISQYDI 390
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK------------ 410
++E G K E+P + +V +L+RV +A++ + +++S +
Sbjct: 391 VLLQKVEASTGVKCEEWPISDGDVAAVLQRVEDAEQEAVKEMRESDQEAKFEREARQLTT 450
Query: 411 -RRRKGGDEDDDIG 423
RR K D+D+G
Sbjct: 451 ARRAKRERGDNDMG 464
>gi|217073990|gb|ACJ85355.1| unknown [Medicago truncatula]
Length = 350
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 258/353 (73%), Gaps = 8/353 (2%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKD-LIGLAQTGSGKTGAFALP 65
+K+F +LGL +LVEACE + W +P KIQ E IP AL+GKD +IG++ SGK GAF LP
Sbjct: 1 MKSFTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLP 60
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQALLE N T FACVLSP+R+L +I+E F+ LGS ++CA LV D++ Q
Sbjct: 61 ILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLGSQFGVKCATLVEANDIIDQ 117
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFE-KSLDEILNV 184
T + ++PH++V T ++ HL T+GFSL LKYLV+ EAD LLND FE + L++IL++
Sbjct: 118 TNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSI 177
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
IP R+T+LFS+TMT+KV +QR L+NP+KI+ +SKYSTV T QQ F+PA KDCYL
Sbjct: 178 IPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQLQQSCFMPAMLKDCYL 237
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
VYILTE++ + VFT+TC + LLAL+L+NL RAIPI +MSQ+K+LGALN FK+G+
Sbjct: 238 VYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKF 297
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
NIL+C++ A RGLDIP+VDMVINY+IP + DY+HRVG T G AIS V
Sbjct: 298 NILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFV 347
>gi|66826815|ref|XP_646762.1| hypothetical protein DDB_G0270396 [Dictyostelium discoideum AX4]
gi|74897375|sp|Q55BR9.1|DDX49_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx49; AltName:
Full=DEAD box protein 49
gi|60474611|gb|EAL72548.1| hypothetical protein DDB_G0270396 [Dictyostelium discoideum AX4]
Length = 508
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 265/401 (66%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF+ELGL LV C+ +G+K PS IQA IP L+G+D+I A+TGSGKT +FA+PIL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L +E+ V FA +L+PTRELA+QI EQF A+G+ +++ C+V++GG+D + Q L
Sbjct: 64 NQL---SEDPYGV---FAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQAL 117
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP- 186
L KRPHI+VATPGRL HL N +L K+LVLDEADRLL +DFE + IL +P
Sbjct: 118 ILDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPP 177
Query: 187 -RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
RQT LFSATMTK + KL L P E SKY TVDTLKQ+Y ++PA KDCYLV
Sbjct: 178 PEKRQTLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLV 237
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
YIL + SS +VF C A + ML L ++ + + Q RL AL FK+G+
Sbjct: 238 YILKKHEGSSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVK 297
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVASRGLDIP V +VINY + +SKDYIHRVGRTAR GR+G AIS + +++
Sbjct: 298 VLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSLI 357
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
IE++I K+L + +++EV L+ + A++I ++ + +
Sbjct: 358 KGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDE 398
>gi|156083174|ref|XP_001609071.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796321|gb|EDO05503.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 454
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 266/407 (65%), Gaps = 28/407 (6%)
Query: 29 KTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVL 88
+ P+ IQ AIPHAL G+D+IGLA TGSGKTGAF +P+L LLE V + VL
Sbjct: 53 RHPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLE------DVQRIYCVVL 106
Query: 89 SPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLT 148
+P+REL QI+EQF AL S I+L+ V++GGVDM+ Q AL KRPH++VA+PGRL DH+
Sbjct: 107 APSRELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVE 166
Query: 149 NTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRA 208
NTKGFSL T+K LV+DEADRLL+ DF++ LD+I++ +P RQT+LFSATMTKK+ KLQ+
Sbjct: 167 NTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQTFLFSATMTKKLSKLQKM 226
Query: 209 CLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRL 268
LK+P+ ++ KYST + L Q++ VP KYK YL +L + + +VF +TCD +
Sbjct: 227 ALKDPISVQVDDKYSTAENLDQRFLLVPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQR 286
Query: 269 LALMLRNLGQRAI---PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMV 325
A L+ L I + G M+Q+ R AL FK G NIL+ T+V RGLD+P V++V
Sbjct: 287 CAAYLKGLKFTTICKVCLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELV 346
Query: 326 INYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEE 385
IN+DIP SKDYIHRVGRTARAGR+G+A+++V QY++E + +IE + KKL EF +E+
Sbjct: 347 INFDIPECSKDYIHRVGRTARAGRSGLALTVVTQYDVELFQRIELALNKKLEEFTDLDED 406
Query: 386 VLLLLE-------------------RVTEAKRISQMTIKDSGNKRRR 413
L R KR+S+ K KR+R
Sbjct: 407 TALAKHALCAESLRRVQSEKLNHKGRTNTNKRVSKFQAKYEAAKRKR 453
>gi|326430346|gb|EGD75916.1| ATP-dependent RNA helicase RhlE [Salpingoeca sp. ATCC 50818]
Length = 2578
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/428 (46%), Positives = 281/428 (65%), Gaps = 14/428 (3%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
GL + L +ACE+VG++ P+ +Q AIP ALEGKD++G+A+TGSGKT AFALP++ +L+
Sbjct: 2160 GLEEVLCQACEDVGYRRPTPVQEAAIPPALEGKDIVGIAKTGSGKTAAFALPVMHSLINA 2219
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
+R F A V++PTRELA QI +F+ALG+ I L+ A+LVGG+ + QQ L + P
Sbjct: 2220 RPRERR---FHALVMAPTRELAQQIEGEFKALGATIGLKTALLVGGLSLQQQQDRLSQNP 2276
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
H+++ATPGR++ HL T GF L +K+L+LDEADR+L +FE+ +D++L IP+ R +L
Sbjct: 2277 HVLIATPGRILHHLERTNGFKLNNVKFLILDEADRMLTPEFEREIDQLLGHIPKRRTNFL 2336
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTE--- 250
FSAT KVK L A L+NPV I+ K TVDTL Q F+P ++K+ YLV+ L
Sbjct: 2337 FSATSNDKVKHLMHAVLRNPVHIKIKHKVKTVDTLDQHCVFLPLQFKETYLVWFLQRQGL 2396
Query: 251 VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICT 310
+ SS ++F T AT L LMLR LG RA + G+MSQ KR+GAL +FK + N+L+CT
Sbjct: 2397 QADSSVIIFCETKRATMKLVLMLRKLGLRATCLHGNMSQEKRIGALARFKTHKDNVLVCT 2456
Query: 311 DVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEK 370
+V +RGLDI V++VINYD+P S Y+HRVGRTARAGR+G A++ V QY++ ++ +IE
Sbjct: 2457 NVGARGLDIQGVELVINYDLPKTSDVYLHRVGRTARAGRSGRAVTFVTQYDVPYFKEIEA 2516
Query: 371 LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-SGNKRRRKGGDEDDDIGRQFGIN 429
+G LP ++E L + EA R + +K+ R ++GG RQ G
Sbjct: 2517 GVGLDLP-VRKYDKECKELYAEIDEASRYATREMKEIEAETRTKRGGK------RQAGGG 2569
Query: 430 KKKLSKRK 437
+ K+K
Sbjct: 2570 NGRFKKKK 2577
>gi|328874156|gb|EGG22522.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 576
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/401 (48%), Positives = 270/401 (67%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +L L+ LV +C+ +G+K PS IQ IP LEG+D++ A+TGSGKT AFA+PIL
Sbjct: 93 KSFGDLKLQPWLVNSCKILGFKQPSNIQYNTIPKVLEGRDILASAKTGSGKTAAFAIPIL 152
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L +E+ V FA VL+PTRELA+QI EQF+A+GS +++ CAV++GG+D + Q+L
Sbjct: 153 SLL---SEDPYGV---FAVVLTPTRELAVQIGEQFKAIGSAMNVNCAVVIGGIDSVAQSL 206
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L KRPHI+VATPGRL HL+N +L K+LVLDEADR+L +DFE +++I+ +P
Sbjct: 207 VLDKRPHIIVATPGRLASHLSNGLKIALKFCKFLVLDEADRILCEDFELEIEKIVEHLPP 266
Query: 188 M--RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
+ RQT L+SATMT +KKLQ +K+P E SKY TVDTLKQ Y ++PA KDC+LV
Sbjct: 267 IENRQTLLYSATMTNNLKKLQLVPMKDPFVFEDNSKYDTVDTLKQHYIYMPALAKDCHLV 326
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y+L SS ++F C + ML L + + + + Q RL AL +FK+G
Sbjct: 327 YLLKSFPQSSCIIFVNNCRTVEAVKGMLNKLDIKTVSLHSFLDQKGRLRALKQFKSGFVK 386
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+LI TDVASRGLDIP V +VINY + +SKDYIHRVGRTAR GRTG AIS V ++++
Sbjct: 387 VLIATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRTGKAISFVTPHDVDLV 446
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+E IGK+L +P E++EV L + A+++ ++ + +
Sbjct: 447 KNVETAIGKQLELYPTEDDEVYRHLNEASTARKMVEIYLDE 487
>gi|342184289|emb|CCC93770.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 515
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/432 (45%), Positives = 272/432 (62%), Gaps = 19/432 (4%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + TFK LGL +EL++AC+ GW+ P++IQ IP EG+D+IG+AQTGSGKTGA+
Sbjct: 38 EESKDTTFKSLGLCEELIKACDEAGWRMPTRIQVATIPVVAEGRDVIGVAQTGSGKTGAY 97
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LP++ LL Q VP V+ PTRELA Q++ QF LG+ + LR A LVGG DM
Sbjct: 98 VLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFIMLGNSVGLRVATLVGGADM 153
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L KRPH++V TPGR+ DHL NTKGF L L LVLDEAD++L D+EK +D IL
Sbjct: 154 VDQACELSKRPHVIVGTPGRVKDHLNNTKGFQLVKLHALVLDEADKMLEMDYEKEIDAIL 213
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+ RQT LFSAT+ K+ +LQ+A L++PV +E K +TV+TLKQ Y F P
Sbjct: 214 EHLTYKRQTLLFSATLNTKIDRLQKASLRDPVLLEVHRKNTTVETLKQYYIFAPFAQMLP 273
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL L+ + + +VF R+ L L LR LG +A+P+ G M Q R AL KFK G
Sbjct: 274 YLHLYLSRETGNHILVFCRSAAVVHRLTLTLRVLGHQALPLMGRMDQRNRNIALTKFKEG 333
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRTARAG G A+++++QY++
Sbjct: 334 KIRILVCTDVAQRGLDIPHTDVVVNFALPDRVEDYIHRVGRTARAGAQGKAVNVISQYDI 393
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN------------- 409
++E G K E+P + +V +L+RV +A++ + +++S
Sbjct: 394 VLLQRVEASTGVKCEEWPISDGDVGAVLQRVEDAEQEAVREMRESDQEAKFEKEARQLTT 453
Query: 410 --KRRRKGGDED 419
K +R+ GD D
Sbjct: 454 VKKAKRERGDND 465
>gi|281202503|gb|EFA76705.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1173
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 270/420 (64%), Gaps = 13/420 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++LGL L+ C+ +G+K PS IQ IP L G+D++ A+TG GKT AFALPIL A
Sbjct: 662 FEDLGLAPWLLACCKQLGFKAPSNIQYNTIPAILSGRDILASAKTGQGKTAAFALPILSA 721
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E FA VL+PTRELA+QI EQF ALGS I++ C V++GG+D +QQ+L L
Sbjct: 722 LSE------DPYGIFAVVLTPTRELAVQIGEQFRALGSAINVNCCVVIGGIDNVQQSLIL 775
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHI+VATPGRL HL N +L ++LVLDEADR+L DFE + +I+ +P
Sbjct: 776 DKRPHIIVATPGRLAAHLNNGMKLALQFCRFLVLDEADRMLGPDFELEVQKIVEHLPPKI 835
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT L+SATMT KKL+ +KNP E +KY TV+TL Q Y F+PA+ KDC+LVY+L
Sbjct: 836 QTLLYSATMTNSNKKLESIPIKNPYIFEDNNKYDTVETLSQYYVFMPAQAKDCHLVYLLK 895
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ +SS +VF C + ML L +++ + +SQ RL AL +FK+G+ +LI
Sbjct: 896 KHDSSSVIVFINNCRTVEAVKGMLNKLDIKSVSLHSFLSQKDRLNALKQFKSGKIRVLIA 955
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIP V MVINY + +SKDYIHRVGRTAR GR+G AIS V +++E +E
Sbjct: 956 TDVASRGLDIPDVQMVINYKLSNSSKDYIHRVGRTARFGRSGRAISFVTPHDVELVKNVE 1015
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD----SGNKRRRKGGDEDDDIGRQ 425
IGK+L + E+E V L + A+++ ++ + + K RR DE +++ RQ
Sbjct: 1016 AAIGKQLELYTTEDEAVYRHLGEASTARKLVEIYLDEIEFGVKEKERR---DERNELTRQ 1072
>gi|390332079|ref|XP_781784.3| PREDICTED: probable ATP-dependent RNA helicase DDX49
[Strongylocentrotus purpuratus]
Length = 478
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/440 (45%), Positives = 280/440 (63%), Gaps = 22/440 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL D LV CE VG K P+ IQ IP L+G D IG A+TGSGKT AFALPILQ
Sbjct: 13 SFSGLGLHDWLVRQCEAVGIKQPTPIQHNCIPPILKGSDCIGCAKTGSGKTAAFALPILQ 72
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L +E+ V F V++PTREL IQI+EQF LG I LR V++GG+DM++Q
Sbjct: 73 KL---SEDPYGV---FGLVVTPTRELGIQIAEQFRVLGKPIGLRVTVVIGGIDMVEQGRE 126
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHIV+ATPGRL DH+ +T F L +K+LVLDEADRLL +F L+ I + +P
Sbjct: 127 LSKKPHIVIATPGRLADHIKSTSTFDLHAIKFLVLDEADRLLEGNFGPDLEVIFDFLPAK 186
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT+T +K+LQ+ + P + + +TV+ L Q+Y +PA+ KD YL+YI+
Sbjct: 187 RQTLLFSATITDTMKELQKMSMDKPFSWHSKAPVATVEQLDQRYVLMPAQVKDAYLMYII 246
Query: 249 TEVSA----SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+E + S ++FT TC +L++MLRNLG + + + Q R+ +L FK+
Sbjct: 247 SEFTEKNRDHSLIIFTSTCKYCHVLSIMLRNLGMQCATLHSLVKQKTRIASLAMFKSNHV 306
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
IL+ TD+ASRGLDIP V M+IN+++PT+ KDYIHRVGRTARAGR G++I++V Q++++
Sbjct: 307 RILVATDLASRGLDIPMVQMIINHNVPTSPKDYIHRVGRTARAGRGGMSITMVTQFDVKL 366
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR----------- 413
IEK I K+ E+ E+ VL +L V AK ++M +++ RR
Sbjct: 367 VQAIEKTINTKMTEYKVPEKNVLPILNEVALAKSKAEMKLEELDFGERRAIHKRKQLILE 426
Query: 414 -KGGDEDDDIGRQFGINKKK 432
K DE D+ ++ G ++KK
Sbjct: 427 GKDPDEADEEIKRAGPSQKK 446
>gi|340057234|emb|CCC51576.1| putative DEAD box RNA helicase [Trypanosoma vivax Y486]
Length = 509
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/396 (48%), Positives = 259/396 (65%), Gaps = 4/396 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + TF++LGL +EL+ AC+ GW P++IQA +P EG+D+IG+AQTGSGKTGA+
Sbjct: 32 EESKDVTFQQLGLCEELILACKEAGWSMPTRIQAATVPVVREGRDVIGVAQTGSGKTGAY 91
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
LP++ LL Q VP V+ PTRELA Q++ QF LG + LR LVGGVDM
Sbjct: 92 VLPLVDWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVMLGRSVGLRVVTLVGGVDM 147
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q L KRPH+VV TPGR+ DHL NTKGF + L LVLDEAD++L D+EK +D IL
Sbjct: 148 VDQACDLSKRPHVVVGTPGRVKDHLNNTKGFQMVKLHALVLDEADKMLEMDYEKEIDAIL 207
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
+P RQT LFSAT+ K+ +LQ+A L +PV ++ K +TVDTLKQ Y F P
Sbjct: 208 EHLPHSRQTLLFSATLNTKIDRLQKASLNDPVLLQVHRKNTTVDTLKQFYIFTPFVQMLP 267
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
L LT + + +VF R + L LR LG RA+P+ G M+Q R AL KFK G
Sbjct: 268 TLHLYLTRETGNHILVFCRGAALVHRITLTLRILGHRALPLMGCMTQRNRNVALTKFKEG 327
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRTARAG G A+++++QY++
Sbjct: 328 KARILVCTDVAQRGLDIPHTDVVVNFALPDRVEDYIHRVGRTARAGAQGKAVNIISQYDI 387
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
++E G K E+P ++ +V +L+RV +A++
Sbjct: 388 VSLQKVEASTGVKCEEWPIQDGDVAAVLQRVEDAEQ 423
>gi|156389591|ref|XP_001635074.1| predicted protein [Nematostella vectensis]
gi|156222164|gb|EDO43011.1| predicted protein [Nematostella vectensis]
Length = 436
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 265/400 (66%), Gaps = 7/400 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV C +G K P++IQ +P L+G+D IG A+TGSGKT AFALPILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + FA VL+PTRELA QI++QF+ LG I L+ AV+VGG+DMM+Q L+
Sbjct: 68 KLCDDPY------GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALS 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L +PH+V+ATPGRL DH+ +T +L +++LVLDEADRLL+ F L I + +P
Sbjct: 122 LANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEK 181
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT+T + +LQ+ P E S +TV L Q+Y PA +DCYLV++L
Sbjct: 182 RQTLLFSATLTDTMGELQKMSGSQPFSYEVQSDIATVAELDQRYLLTPAHVRDCYLVHLL 241
Query: 249 TEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
E + S +VFT TC ++L M LG + + +SQ +RL AL +FK+G IL
Sbjct: 242 RENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKIL 301
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIP V++V+N +IP + KDYIHRVGRTARAGR G+AIS+V QY+++ +
Sbjct: 302 VATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRVKK 361
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
IE+ I KL E+ E+EVL LL+ V A+R +++ ++DS
Sbjct: 362 IEEKINTKLTEYTTSEKEVLTLLKAVLVARREAELRVRDS 401
>gi|291231214|ref|XP_002735561.1| PREDICTED: Ddx49-A-prov protein-like [Saccoglossus kowalevskii]
Length = 445
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/427 (46%), Positives = 275/427 (64%), Gaps = 23/427 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL D LV+ C+ VG P+ IQ IP LEG D +G A+TGSGKT AFALPILQ
Sbjct: 14 FSSLGLNDWLVKQCKAVGITKPTPIQYYCIPQILEGVDCLGCAKTGSGKTAAFALPILQK 73
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E +A VL+PTRELA QI+EQF LG I L+ AV++GG D+M+Q + L
Sbjct: 74 LCEDPY------GIYALVLTPTRELAFQIAEQFRILGKPIGLKDAVIIGGRDVMRQGMDL 127
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+PH+V+ATPGRL DH+ ++ FSL +K+LVLDEADRLL D F + L I + +P R
Sbjct: 128 ADKPHVVIATPGRLADHINSSNTFSLKKIKFLVLDEADRLLEDTFAEDLQVIFDALPEKR 187
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL- 248
QT LFSAT+T K++KLQ L P ++ ++ +TV+ L Q+Y +PAK +D YLV+IL
Sbjct: 188 QTLLFSATLTDKLEKLQTLALNKPFFWQSKAEIATVEQLDQKYVLIPAKVRDAYLVHILQ 247
Query: 249 ---TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+E S ++F+ TC + L LML+ L P+ + Q R+ +L +FK+G
Sbjct: 248 KICSETEDYSMIIFSNTCKNCQSLYLMLKALEFPCTPLHSMIPQRDRIASLAQFKSGRVR 307
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVASRGLDIP V +V+N+++P + DY+HRVGRTARAGR G+A++L+ QY+++
Sbjct: 308 ILLATDVASRGLDIPIVQLVVNHNVPWSPIDYVHRVGRTARAGRGGMALTLMTQYDVKLI 367
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 425
IEK I KL E+P +++EVL +L V+ AKR ++M + E+ D G +
Sbjct: 368 EAIEKQINTKLTEYPVDDKEVLTILNEVSVAKREAEMRL-------------EEQDFGER 414
Query: 426 FGINKKK 432
INK+K
Sbjct: 415 KTINKRK 421
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/376 (53%), Positives = 260/376 (69%), Gaps = 43/376 (11%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ + L EAC+ +GWK+P+KIQ EAIP AL+GKD+IGLA+TGSGKTGAFALPILQ+LL
Sbjct: 1 GVTEVLCEACDQLGWKSPTKIQIEAIPVALQGKDVIGLAETGSGKTGAFALPILQSLL-- 58
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
A QR VL+PTRELA QISEQFEALGS I ++CAV+VGG+DMM Q+L L K+P
Sbjct: 59 ASPQR----LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKP 114
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
HIV+ATPGRL+DHL NTKGFSL +K+LV+DEADR+LN DFE +D+IL VIPR R+T+L
Sbjct: 115 HIVIATPGRLIDHLENTKGFSLRAVKFLVMDEADRILNMDFETEVDKILKVIPRERRTFL 174
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSATMTKKV+KLQRA LK+PVK ++KY+TVD L+Q Y F+P+KYKDCYLV IL +++
Sbjct: 175 FSATMTKKVQKLQRAALKDPVKCAVSTKYTTVDKLQQYYIFIPSKYKDCYLVSILNDLAG 234
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+S ++F TC+ + +AL+LRNLG AIP+ G MSQ R+ +L
Sbjct: 235 NSFIIFCSTCNNAQRVALLLRNLGITAIPLHGQMSQ--RIESLI---------------- 276
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR------TGVAISLVNQYE-LEWYL 366
G +P+ PT ++ + V R + A R +G+ ++N Y+ L Y
Sbjct: 277 --GKKLPA--------FPTQEEEVMMLVERVSEAQRFARLTYSGLFCVVINPYKNLPIYS 326
Query: 367 Q--IEKLIGKKLPEFP 380
+ IE GKK E P
Sbjct: 327 ENIIEMYRGKKRHEMP 342
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 403
IE LIGKKLP FP +EEEV++L+ERV+EA+R +++T
Sbjct: 272 IESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARLT 307
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/403 (48%), Positives = 269/403 (66%), Gaps = 11/403 (2%)
Query: 11 KELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQAL 70
KELG+ + LV AC+ +G + P+ +Q +P L+GKD++G+AQTGSGKT AFALPILQ L
Sbjct: 5 KELGVAEWLVGACKELGMRHPTPVQRACVPQILKGKDVLGMAQTGSGKTAAFALPILQRL 64
Query: 71 LEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALG 130
EN + FA V++PTRELA QIS+QF+ALG+G+ LRCAV+VGG+DM Q L
Sbjct: 65 ---GENPYGI---FALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQILT 118
Query: 131 KRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+RPH+V+ATPGR+ HL + + K+LVLDEAD LL+ F+ L I + I +
Sbjct: 119 ERPHVVIATPGRIKAHLGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTIFDGISKQ 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATMT ++ L+ +A TV++L Q+Y F+P K K+ YL Y+L
Sbjct: 179 RQTLLFSATMTGDLQALRDLFGHRAFFYQAYEGLKTVESLDQRYIFMPGKVKNVYLTYLL 238
Query: 249 TEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ S ++F C LL+L+L LG A+ + +Q +RL ALN+FK+G+
Sbjct: 239 ENLELGDIRSVIIFVSRCRTCHLLSLILDELGISAVALHSVKTQPQRLAALNQFKSGQAT 298
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
ILI TDVASRGLDIP+VD+V+NYDIP +KDY+HRVGRTARAGR G AISLV + ++E
Sbjct: 299 ILIATDVASRGLDIPTVDLVVNYDIPRFTKDYVHRVGRTARAGRGGRAISLVTELDVELV 358
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
++E +GKKL E+ E +VL + +V +AKR++ M ++DSG
Sbjct: 359 HEVESFLGKKLEEYEVSESDVLKNITKVYKAKRVAIMKMEDSG 401
>gi|167539739|ref|XP_001741236.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165894254|gb|EDR22313.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 406
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/380 (50%), Positives = 257/380 (67%), Gaps = 21/380 (5%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LGL E+++ E +G+K P+KI + + SGKT +F LP++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTKISRKFY--------------SRSGKTASFLLPMI 54
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCAVLVGGVDMMQQT 126
Q LL + E R AF+ ++ PTRELA Q+ E + +G + L +LVGG+D+M+Q+
Sbjct: 55 QHLLNVKEKNR---AFYCIIIEPTRELAAQVVEVLDEIGKALPGLMSCLLVGGMDVMKQS 111
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
+ L KRPH++V TPGR++ H+ NTKG S+ +K+LV+DEAD+LL DF +D ++
Sbjct: 112 VQLAKRPHVIVGTPGRIVYHIKNTKGVEESIQKVKFLVIDEADKLLEMDFANEIDYLIEK 171
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P R T LFSATM+ KV+KLQRA L +PVKI E KY TVDTL+Q+Y F+P KY+D Y
Sbjct: 172 LPSQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEYCFIPFKYRDGY 231
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+ IL E S ++FT C L +MLR LG AIP+ G MSQ KRL AL KFK+G+
Sbjct: 232 LLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPLHGKMSQQKRLIALEKFKSGK 291
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLDIP+VD+VINYD P KDYIHRVGRTARAG++G AI+LV QY +E
Sbjct: 292 RGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAGKSGYAITLVTQYSIE 351
Query: 364 WYLQIEKLIGKKLPEFPAEE 383
Y +IE +I KKL E+ A +
Sbjct: 352 LYQRIETMIEKKLNEYKAND 371
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 271/405 (66%), Gaps = 11/405 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ELG+ + LV AC+ +G + P+ +Q +P L+GKD++G+AQTGSGKT AFALPILQ
Sbjct: 54 SFEELGVAEWLVGACKELGMRHPTPVQRACVPQILKGKDVLGMAQTGSGKTAAFALPILQ 113
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L EN + FA V++PTRELA QIS+QF+ALG+G+ LRCAV+VGG+DM Q
Sbjct: 114 RL---GENPYGI---FALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQI 167
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +RPH+V+ATPGR+ H+ + + K+LVLDEAD LL+ F+ L I + I
Sbjct: 168 LMERPHVVIATPGRIKAHIGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTIFDGIS 227
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT LFSATMT ++ L+ +A TV++L Q+Y F+P K K+ YL Y
Sbjct: 228 KQRQTLLFSATMTGDLQALRDLFGHRAFFYQAYEGLKTVESLDQRYIFMPGKVKNVYLTY 287
Query: 247 ILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+L + S ++F C LL+L+L LG A+ + +Q +RL ALN+FK+G+
Sbjct: 288 LLENLELEDIRSVIIFVSRCRTCHLLSLILDELGISAVALHSVKTQPQRLAALNQFKSGQ 347
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
ILI TDVASRGLDIP+VD+V+NYDIP +KDY+HRVGRTARAGR G AISLV + ++E
Sbjct: 348 ATILIATDVASRGLDIPTVDLVVNYDIPRFTKDYVHRVGRTARAGRGGRAISLVTELDVE 407
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
++E +GKKL E+ E +VL + +V +AKR++ M ++DSG
Sbjct: 408 LVHEVESFLGKKLEEYEVSEADVLKNITKVYKAKRVAIMKMEDSG 452
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/431 (44%), Positives = 280/431 (64%), Gaps = 15/431 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL + L + C +G P++IQ IP L G+D IG A+TGSGKT AFALPI+Q
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEILSGRDCIGSAKTGSGKTAAFALPIIQK 64
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E FA +L+PTRELAIQI++QF+ALG I L AV++GG+DM++Q + L
Sbjct: 65 LSEDPY------GIFALILTPTRELAIQIADQFKALGKSIGLNDAVIIGGLDMVKQGMEL 118
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+PH+V+ATPGRL H+T+ FSL +K+LVLDEADRLL FE L+ I + I + R
Sbjct: 119 SNQPHVVIATPGRLASHITSGTKFSLNKIKFLVLDEADRLLEKSFENDLEVIFDNIAKKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSAT+T + L+ NP E S ++TV L Q+Y +P++ KDCYLV++L
Sbjct: 179 QTLLFSATITDAINHLKEVA-HNPFCYEVKSDFATVTELDQRYLLIPSQVKDCYLVHLLQ 237
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S S ++FT+TC + ++++ MLR + + + MSQ +RL +L +F++G IL+
Sbjct: 238 NFSEKSVIIFTQTCRSCQVISFMLRKVEFKCAGLHSVMSQRERLSSLGRFRSGHVKILVA 297
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVASRGLDIP V +VINY++P + KDY+HRVGRTARAGR G++++L+ Q++++ IE
Sbjct: 298 TDVASRGLDIPLVQLVINYNVPASPKDYVHRVGRTARAGRGGMSLTLLTQFDIDRLKAIE 357
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG------NKRRRKGGDEDDDIG 423
IG K+ EF E++ + LL+ ++ +R ++ + D+ N +R+ G +
Sbjct: 358 TFIGLKMKEFETNEDDAVKLLKPISIIRREVEIRLNDANFGEKKKNNKRKLGLLNSNSKP 417
Query: 424 RQFGINKKKLS 434
+ F NKKK++
Sbjct: 418 KLF--NKKKIT 426
>gi|443682977|gb|ELT87384.1| hypothetical protein CAPTEDRAFT_162583 [Capitella teleta]
Length = 460
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/437 (45%), Positives = 273/437 (62%), Gaps = 19/437 (4%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
E +K+F +LGL D LV+ CE VG P+ IQ +P L G D IG A+TGSGKT A
Sbjct: 10 GESTFLKSFVDLGLNDWLVKQCEAVGMTRPTPIQLNCVPKILSGHDCIGCAKTGSGKTAA 69
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ L E FA VL+PTRELA QI EQF LG I L+ A++ GG D
Sbjct: 70 FALPILQKLCEDPY------GIFALVLTPTRELAYQIGEQFSVLGKPIGLKEAIITGGRD 123
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q L L ++PH+VV+TPGRL DHL SL + +LV+DEADRLL D+F + L I
Sbjct: 124 MIDQGLLLAQKPHVVVSTPGRLADHLRTNADVSLKKIAFLVMDEADRLLEDNFGEQLQTI 183
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+P+ RQT LFSATMT +K+L+ L P ++ K +TVD+L QQY +PA KD
Sbjct: 184 FAALPKKRQTLLFSATMTDTLKELEDVALNKPFFWQSKDKVATVDSLTQQYVLMPADVKD 243
Query: 242 CYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
YL++IL E +SS M+FT TC ++L L+ + +G + + ++ Q RL +L
Sbjct: 244 AYLMHILRKFTEENPSSSVMIFTNTCKYCQILGLVAKEVGLECVSLHSYLMQKIRLSSLA 303
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
KFK+ + I+ TDVASRGLDIP+VD+VIN++IP K+Y+HRVGRTARAGR G AI++V
Sbjct: 304 KFKSHQVKIMFATDVASRGLDIPTVDLVINHNIPNKPKNYVHRVGRTARAGRLGDAITMV 363
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI--KDSGNKRRRKG 415
Q+++ IE I KL E +++EV ++ V+ A+R +Q+ + +D G K+ +
Sbjct: 364 TQFDVNLVHAIEDHINAKLVEHKVDDDEVAKIVTEVSVARREAQIKLDEQDFGEKKEQNK 423
Query: 416 -------GDEDDDIGRQ 425
G + D++ R+
Sbjct: 424 RMQMVLEGKDPDEVARK 440
>gi|428181028|gb|EKX49893.1| hypothetical protein GUITHDRAFT_159399 [Guillardia theta CCMP2712]
Length = 413
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/419 (48%), Positives = 275/419 (65%), Gaps = 17/419 (4%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E F LG+ + LV AC VG K P+ +Q IP AL G++++ A+TGSGKT A
Sbjct: 4 AEERE---FSSLGIENWLVAACNAVGLKRPTDVQWNCIPPALAGRNILASAETGSGKTAA 60
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPI+Q L + FA VL+PTRELA QI +QF ALGS I LR V+VGG+D
Sbjct: 61 FALPIIQQL------SKDPYGVFAVVLTPTRELAFQIQDQFVALGSRIQLRNCVVVGGLD 114
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLD 179
MM+Q + L KRPH+V+ATPGRL DH+ ++ G +L + +VLDEADRLL D FE L
Sbjct: 115 MMKQAVELCKRPHVVIATPGRLSDHINSSSGVKEALARTRVVVLDEADRLLEDCFETELA 174
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQR-ACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
IL+ +P+ R TYLFSAT+T +++L+ +KN + EA + +TV T+++ Y +P
Sbjct: 175 NILDALPKNRSTYLFSATITASIEELKHLGAMKNCFEYEADNPKTTVRTVREMYLHMPKM 234
Query: 239 YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
KD YLV+++ A + ++F + L+L ++ + + + Q++RL AL++
Sbjct: 235 VKDVYLVHLVRNSEAKAMIIFVGRKTTCVFVQLLLEDIPCSCLVVLLNSRQNRRLAALDR 294
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK G C IL+ TDVASRGLDIP VD+VINYDIP ++KDYIHRVGRTARAGRTG A+SLV
Sbjct: 295 FKGGRCRILVATDVASRGLDIPKVDLVINYDIPNDAKDYIHRVGRTARAGRTGTAVSLVT 354
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS--QMTIKDS---GNKRR 412
QY++E IE KKL +F +EEEVL + V +AKR++ QM DS +KRR
Sbjct: 355 QYDVELVHNIEAETEKKLEDFGLKEEEVLESMSEVMKAKRLARVQMLELDSEGQDDKRR 413
>gi|328773329|gb|EGF83366.1| hypothetical protein BATDEDRAFT_8371 [Batrachochytrium
dendrobatidis JAM81]
Length = 460
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/403 (47%), Positives = 277/403 (68%), Gaps = 8/403 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A+ E TF+ +GLR L+ + +++ + PS+IQ IPH L G+D+IG A+TGSGKT A
Sbjct: 27 AQVSESATFESIGLRPWLIGSLKSISIRHPSEIQQACIPHILNGRDIIGGAKTGSGKTAA 86
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQ L +E+ V FA VL+P RELA QI+EQF LG+GI+L+ +V+VGG+D
Sbjct: 87 FALPILQKL---SEDPYGV---FALVLTPARELAFQIAEQFRVLGTGINLKLSVVVGGMD 140
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHL-TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
MM Q L L ++PH+++ATPGRL+DH+ +++ +++LV+DEADRLL+D F L+
Sbjct: 141 MMSQALELSQKPHVIIATPGRLVDHIRSSSNAIHFKRIRFLVMDEADRLLDDTFSDDLEG 200
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL+ +P+ RQT LF+ATMT ++K+LQ + P E A +YSTV+ L QQY V + +
Sbjct: 201 ILSQLPQKRQTLLFTATMTDEIKELQMSSKTLPFVYECAERYSTVEKLDQQYILVSSNVR 260
Query: 241 DCYLVYILTE-VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
D YL +I+ E +S + ++F C L +ML+ LG ++ + M Q+ RLG+L KF
Sbjct: 261 DAYLAHIVRESLSGKTMIIFASKCRTCETLRIMLKELGLKSTALHAQMPQNDRLGSLAKF 320
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
K+G ILI TDV SRGLDIP+V +VINY++P ++ DYIHRVGRTARAG+ G+++S V++
Sbjct: 321 KSGIVPILIATDVGSRGLDIPTVKVVINYELPADATDYIHRVGRTARAGQGGMSLSFVSE 380
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 402
+++ IEK KK+ E+ E +VL +L+ V AKRI++M
Sbjct: 381 RDVDIIHNIEKKTKKKMTEYTVPENDVLEILDEVNLAKRIAKM 423
>gi|330803884|ref|XP_003289931.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
gi|325079973|gb|EGC33549.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
Length = 501
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/401 (47%), Positives = 266/401 (66%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K F+ LGL L+ +C+ + +K PS IQ IP + G+D+I A+TGSGKT +FA+PIL
Sbjct: 5 KFFESLGLAPWLIRSCKQLNFKNPSNIQYNTIPEIINGRDIIASAKTGSGKTASFAIPIL 64
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L +E+ V FA VL+PTRELA+QI+EQF A+G+ ++++ + ++GG+D ++Q L
Sbjct: 65 NLL---SEDPYGV---FAVVLTPTRELAVQIAEQFSAIGAPMNVQVSTVIGGIDTVKQAL 118
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP- 186
L KRPHI+VATPGRL HLTN +L K+LVLDEADRLL +DFE + IL +P
Sbjct: 119 ILDKRPHIIVATPGRLASHLTNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEYLPP 178
Query: 187 -RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
RQT LFSATMT +KKL+ L +P E SKY TVDTLKQ+Y ++PA+ KDCYLV
Sbjct: 179 PTQRQTLLFSATMTNNLKKLESISLNSPFIFEDNSKYDTVDTLKQEYIYMPAQAKDCYLV 238
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y+L + S +VF C + + ML L A+ + + Q RL AL FK+G+
Sbjct: 239 YLLKKHIGQSVIVFINNCYSVEAVKGMLNKLDIPAVSLHSFLDQKARLSALKVFKSGKVK 298
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+LI TDVASRGLDIP V+MVINY + +SKDYIHRVGRTAR G++G AIS + ++++
Sbjct: 299 VLIATDVASRGLDIPDVEMVINYKLSNSSKDYIHRVGRTARFGKSGRAISFITPHDVQLI 358
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
IE +I K+L + +++EV L+ + A++I ++ + +
Sbjct: 359 KNIELVIKKELELYKTDDDEVFRHLKESSTARKIVEVHLDE 399
>gi|348676065|gb|EGZ15883.1| hypothetical protein PHYSODRAFT_504921 [Phytophthora sojae]
Length = 445
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/410 (47%), Positives = 270/410 (65%), Gaps = 16/410 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LG+ LV+ CE +G + P+ +Q IP L G+D+IG AQTGSGKT AFALPIL
Sbjct: 4 SFLNLGVDPWLVKRCELLGIRHPTPVQVHCIPPILSGRDVIGCAQTGSGKTAAFALPILH 63
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +A VL+PTRELA QI++QF A GS +++RCAV+VGGVDM++Q+L
Sbjct: 64 TL------SKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLT 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L +RPHI+VATPGR DHL + ++ +KY+VLDEADRLL+ F K L I + +P
Sbjct: 118 LQQRPHIIVATPGRFRDHLLRVEPPNISLVKYVVLDEADRLLDVSFAKDLSFIFDKLPAK 177
Query: 189 RQTYLFSATMTKKVKKLQRACLK-NPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT LFSATMT + +L++ L + + + TV TLKQ Y F+PA+ K +
Sbjct: 178 RQTLLFSATMTANLDRLEQTALSDDAFRFDTTPSVKTVATLKQFYLFIPAQGKKDQDLEQ 237
Query: 248 LTEVSASST-------MVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
L E + SS+ M+F TC L+ + LG + + + MSQ++RL AL KFK
Sbjct: 238 LLEAATSSSKRQLRSMMIFVSTCKMCELVGEIGNELGTKCVTLHSMMSQNRRLAALGKFK 297
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G +ILI TDVASRGLDIP VD+V+N+D+P ++ DYIHRVGRTARAGR+G AISLV Q+
Sbjct: 298 SGLSHILISTDVASRGLDIPEVDVVLNFDLPRDADDYIHRVGRTARAGRSGQAISLVTQH 357
Query: 361 ELEWYLQIEKLIGKKLPEFPAE--EEEVLLLLERVTEAKRISQMTIKDSG 408
++E IE +GKK+ ++ AE E++VL LL VT A R+++M + + G
Sbjct: 358 DIELLQNIEAKVGKKMDDYEAEAPEKKVLELLNDVTTATRVAKMKLTERG 407
>gi|340376506|ref|XP_003386773.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Amphimedon queenslandica]
Length = 441
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 201/409 (49%), Positives = 256/409 (62%), Gaps = 11/409 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL LV CE +G+K + +Q IP +EG+D IG A+TGSGKT AFALPIL
Sbjct: 6 TFSSLGLSSWLVRQCEGLGFKEATPVQKNCIPPIMEGRDCIGSAKTGSGKTAAFALPILH 65
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+L R +A VL+PTRELA QIS+QF LG I ++ V+VGGVDMM Q LA
Sbjct: 66 SL------SRDPYGIYALVLTPTRELAYQISDQFCVLGKHIGVKSEVIVGGVDMMVQALA 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L +RPHIVVATPGRL DHL +T + +KYLVLDEADRLL FE L I +P
Sbjct: 120 LSRRPHIVVATPGRLADHLQSTDTVFMEKIKYLVLDEADRLLEKCFEDDLSVIFERLPEK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT+T + +L+ P EA + STVD+L Q Y +PA+ KDCYL+ +L
Sbjct: 180 RQTLLFSATLTDSLNRLKELSTTPPFCWEAPKEISTVDSLDQHYVLIPAQVKDCYLITLL 239
Query: 249 TE---VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ V + ++FT TC + L+L+ L + + M+Q +RL +L FK+ +
Sbjct: 240 DQFHDVDKKTIILFTDTCRNCEIYGLLLKQLEFPNVTLHSLMTQRRRLSSLAMFKSRQVR 299
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVASRGLDIP V +VIN +IP +SKDYIHRVGRTARAG G AISL+ QY++
Sbjct: 300 ILVATDVASRGLDIPLVGVVINLNIPASSKDYIHRVGRTARAGHGGQAISLMTQYDVTRV 359
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK--DSGNKRR 412
IE I +L E+P EE+ L L VT AKR + + D G KRR
Sbjct: 360 KNIENDIKTELVEYPIEEDIALKNLSVVTMAKREVDIKLSETDFGKKRR 408
>gi|297704172|ref|XP_002828993.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Pongo abelii]
Length = 483
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 AHRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|449444278|ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus]
gi|449475871|ref|XP_004154575.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus]
Length = 491
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/411 (47%), Positives = 271/411 (65%), Gaps = 11/411 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LGL + +++ C+ + K P+ +Q IP L G D++G+AQTGSGKT AFALPILQ
Sbjct: 57 TFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 116
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E T FA V++PTRELA Q++EQF ALGS ++LRC+V+VGG+DM+ QT +
Sbjct: 117 RLSE------TPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQS 170
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSL--GTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L KRPHIV+ATPGR+ L + + K+LVLDEADR+L+ FE+ L I +P
Sbjct: 171 LLKRPHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLP 230
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R RQT LFSATMTK ++ L + EA + TVD LKQQY F+P KD YL++
Sbjct: 231 RNRQTLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLH 290
Query: 247 ILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+L+ ++ S ++F +TC + LL L+L L Q + SQS+RL AL +FK+G
Sbjct: 291 LLSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGR 350
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVASRGLDIP+VD+VINYDIP +DY+HRVGRTARAGR G+A+S + Q ++
Sbjct: 351 VPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVH 410
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+IE +GK+L F +E EVL + +V +A+ +++M + D G + + K
Sbjct: 411 LIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVK 461
>gi|344283067|ref|XP_003413294.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Loxodonta
africana]
Length = 481
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 272/445 (61%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LVLDEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSSTFSIKKIRFLVLDEADRLLEQGCTDFTTDLEVILGAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR L + + M Q +R AL KFK+
Sbjct: 238 LIQGFQDEHEDWSIIIFTNTCKTCQILCMMLRKLSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G+AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGMAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLDEFSVEEAEVLRILTQVNVVRRECEIKLEATNFDERKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K + R+
Sbjct: 418 LEGKDPDLEAKRKTELAKIRQKNRR 442
>gi|426228752|ref|XP_004008460.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Ovis aries]
Length = 483
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 271/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSMKKIRFLVMDEADRLLEQGCTDFTVDLEVILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EFP EE +VL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFPVEEAQVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQMI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|31542656|ref|NP_061943.2| probable ATP-dependent RNA helicase DDX49 [Homo sapiens]
gi|350538363|ref|NP_001233517.1| probable ATP-dependent RNA helicase DDX49 [Pan troglodytes]
gi|397493813|ref|XP_003817790.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Pan paniscus]
gi|74753527|sp|Q9Y6V7.1|DDX49_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX49; AltName:
Full=DEAD box protein 49
gi|2443870|gb|AAB81544.1| R27090_2 [Homo sapiens]
gi|12803677|gb|AAH02674.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapiens]
gi|119605165|gb|EAW84759.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49, isoform CRA_b [Homo
sapiens]
gi|312152524|gb|ADQ32774.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [synthetic construct]
gi|343960719|dbj|BAK61949.1| probable ATP-dependent RNA helicase DDX49 [Pan troglodytes]
gi|410219928|gb|JAA07183.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410255310|gb|JAA15622.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410295734|gb|JAA26467.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410333447|gb|JAA35670.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
Length = 483
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|440904005|gb|ELR54578.1| Putative ATP-dependent RNA helicase DDX49, partial [Bos grunniens
mutus]
Length = 486
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 271/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 7 FAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 66
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 67 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 120
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 121 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEVILAAVP 180
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 181 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 240
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 241 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTMALHSMMKQKERFAALAKFKSS 300
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 301 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 360
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EFP EE +VL +L +V +R ++ ++ + NKR++
Sbjct: 361 HLVHAIEEQIKKKLEEFPVEEAQVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQMI 420
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 421 LEGKDPDLEAKRKAELAKIKQKNRR 445
>gi|149757285|ref|XP_001503455.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Equus caballus]
Length = 483
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 272/445 (61%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LVLDEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSSTFSIKKIRFLVLDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR G A+ + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHQDWSIIIFTNTCKTCQILCMMLRKFGFPAVALHSTMRQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EF +E +VL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVKEADVLQILTQVNVVRRECEIKLEAANFGEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|431922034|gb|ELK19207.1| Putative ATP-dependent RNA helicase DDX49 [Pteropus alecto]
Length = 483
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTMDLEVILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 AQRQTLLFSATLTDTLKELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPAVQLVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|62898149|dbj|BAD97014.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 variant [Homo sapiens]
Length = 483
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPVILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|403303461|ref|XP_003942345.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Saimiri
boliviensis boliviensis]
Length = 483
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAQLGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGLDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLETILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSVIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|311249349|ref|XP_003123587.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Sus scrofa]
Length = 483
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQSLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQMI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|395847961|ref|XP_003796632.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Otolemur
garnettii]
Length = 483
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGHDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKECIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL+ +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEVILSAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 TRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHKDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF +E EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVDEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|428167084|gb|EKX36049.1| hypothetical protein GUITHDRAFT_165849 [Guillardia theta CCMP2712]
Length = 312
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/299 (57%), Positives = 228/299 (76%), Gaps = 6/299 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+++ + K+F++LG+ ++L E C +GWK P+ IQ E+IP AL+G+DLI LA+TGSGKTG+
Sbjct: 7 SDKSKAKSFEDLGISEQLAETCRALGWKHPTDIQQESIPWALQGRDLIALAKTGSGKTGS 66
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPI++ALL + +FA V+SPTRELA QI E F+ALG GI L+ ++GG+D
Sbjct: 67 FALPIIEALL------KNPAPYFAVVISPTRELASQIEEHFQALGKGIGLKTVSVIGGID 120
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
+ Q L K PH++V TPGRL+ L N KGFSL +KYLVLDEADRLL++DFEK LD+I
Sbjct: 121 EVTQMRMLAKTPHVIVGTPGRLLYMLQNMKGFSLRNIKYLVLDEADRLLHEDFEKQLDQI 180
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+PR RQT+LFSATMT KV+KLQRA L++P+K+E ASKYSTVDTLKQQY FVP +KD
Sbjct: 181 LEVLPRERQTFLFSATMTSKVQKLQRASLRDPIKVEVASKYSTVDTLKQQYMFVPHMHKD 240
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
YL Y+L E++ ++T+VF TC + + ++LR+LG +A+ I G MSQ+KRL ALN FK
Sbjct: 241 TYLAYLLNELAGNTTIVFCCTCSNAQRICIILRSLGFKALVIHGQMSQNKRLAALNNFK 299
>gi|402904855|ref|XP_003915254.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Papio anubis]
Length = 483
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LV C+ +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVAQCQQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|332253514|ref|XP_003275885.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Nomascus
leucogenys]
Length = 483
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQCFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE +VL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAKVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|355703340|gb|EHH29831.1| Putative ATP-dependent RNA helicase DDX49 [Macaca mulatta]
Length = 483
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LV C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 VYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHTIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|294868682|ref|XP_002765642.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239865721|gb|EEQ98359.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 367
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 223/302 (73%)
Query: 84 FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRL 143
+ACVL+PTREL +Q +QFE LG+ I+L A +VGG+DM+ Q ++L K+PHI+VA+PGRL
Sbjct: 31 WACVLAPTRELCVQTGQQFEGLGASINLTTATIVGGLDMVTQAMSLSKKPHIIVASPGRL 90
Query: 144 MDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVK 203
+DHL NTKGF L T+K+LV+DEADRLL DFE +L++I+ PR RQT+LFSATMT KV
Sbjct: 91 VDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQTFLFSATMTNKVS 150
Query: 204 KLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC 263
+LQRA L PVK E A K+ L Q Y FVP K+K YL +L S+ M+F TC
Sbjct: 151 QLQRASLTRPVKCEVARKFDVAKGLVQNYMFVPHKHKHAYLAALLAHFKLSTVMIFVDTC 210
Query: 264 DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVD 323
+ +A LR+LG + + G M+Q+ RLGALN+F+AG +IL+ TDVA+RGLDIPSVD
Sbjct: 211 LNAQRMATTLRHLGHNCVCLHGKMTQTHRLGALNQFRAGTRSILVATDVAARGLDIPSVD 270
Query: 324 MVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 383
+VIN+D+P N ++YIHRVGRTARAGRTG +++LV QY++E + +IE GKK+ EFP
Sbjct: 271 VVINFDVPKNPEEYIHRVGRTARAGRTGRSVTLVTQYDIEPFQRIENKQGKKMEEFPEVN 330
Query: 384 EE 385
EE
Sbjct: 331 EE 332
>gi|380786067|gb|AFE64909.1| putative ATP-dependent RNA helicase DDX49 [Macaca mulatta]
Length = 483
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LV C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 VYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|355755632|gb|EHH59379.1| Putative ATP-dependent RNA helicase DDX49 [Macaca fascicularis]
Length = 483
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LV C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|444726610|gb|ELW67134.1| putative ATP-dependent RNA helicase DDX49 [Tupaia chinensis]
Length = 479
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKRIRFLVMDEADRLLEQGCTDFTADLEVILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP + KD YLV+
Sbjct: 178 TRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPERVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LVQTFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAANFDEKKEVNKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|158257264|dbj|BAF84605.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/445 (45%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++V G+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVDGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|224098856|ref|XP_002311293.1| predicted protein [Populus trichocarpa]
gi|222851113|gb|EEE88660.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/403 (46%), Positives = 264/403 (65%), Gaps = 10/403 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL + ++ C+ +G K P+++Q+ IP L G+D++GLAQTGSGKT AFALPIL
Sbjct: 64 FSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPILHR 123
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L AE+ V FA V++PTRELA Q++EQF A GS + LRCAV+VGG+D++ Q L
Sbjct: 124 L---AEDPFGV---FALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTL 177
Query: 130 GKRPHIVVATPGRLMDHLTNTK-GFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
RPH+V+ATPGR+ L N K+LVLDEADRL++ F++ L + +P+
Sbjct: 178 MGRPHVVIATPGRIKVLLENPDISPVFSRTKFLVLDEADRLIDVGFQEELRVVFKCLPKS 237
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATMT +++ L E + TVDTL QQY +P K+ YLVYIL
Sbjct: 238 RQTLLFSATMTSELQTLLELSENKAYFYEEYEGFKTVDTLNQQYIQMPKNVKEVYLVYIL 297
Query: 249 T---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ E+ S ++F C RLL+ +L+ L + SQS RL +L++FK+G+ +
Sbjct: 298 SKMEEMGIRSAIIFVSACSTCRLLSSLLKELDHEPATLYSLESQSARLASLHRFKSGQAS 357
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
ILI TD+ASRGLDIP+VD+VINYD+P + DY+HRVGRTARAGR G+A+SLV Q++ +
Sbjct: 358 ILIATDLASRGLDIPTVDLVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLM 417
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
IE +GK+ +F +E EVL + +V +A+R+++M + D G
Sbjct: 418 KAIEAEVGKQFEKFECKENEVLSDITKVYKARRVAKMKMMDDG 460
>gi|410950898|ref|XP_003982139.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Felis catus]
Length = 483
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FASLGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTADLETILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 TRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EF EE +VL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAKVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|348558702|ref|XP_003465155.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Cavia
porcellus]
Length = 477
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 267/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ F + +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFHIKKIRFLVMDEADRLLEQGCTDFTADLETILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 AQRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LVQSFQDKHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFSALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I K+L E P EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKQLEELPVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGRDPDLEAKRRAELAKIKQKNRR 442
>gi|302835956|ref|XP_002949539.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
gi|300265366|gb|EFJ49558.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
Length = 423
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 191/384 (49%), Positives = 258/384 (67%), Gaps = 12/384 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL + L C+++G TP+++Q IP L+G+D+IGLAQTGSGKT AFALPILQ
Sbjct: 40 FKSLGLSEWLCGVCKSLGMNTPTEVQRGCIPAILQGRDVIGLAQTGSGKTAAFALPILQV 99
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L A++ V FA VL+PTRELA QI EQF ALG+G+ L+ V++GGVDM Q L
Sbjct: 100 L---AKDPYGV---FALVLTPTRELAAQICEQFRALGAGMRLKELVIIGGVDMQHQAREL 153
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGT--LKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
+RPH+VVATPGRL L G S G ++LVLDEADR+L+ FE L + + +
Sbjct: 154 ARRPHVVVATPGRLRGLLDADGGLSAGLSRTRFLVLDEADRVLDPTFEDDLRYVRFCLRQ 213
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT LFSATMT+ + LQ+A L++ +A T D L+++Y F+PAK K+ YL Y+
Sbjct: 214 DRQTLLFSATMTRSLIALQKASLQDAHVFQAYEGLRTADRLREEYLFLPAKVKEVYLHYL 273
Query: 248 LTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LT V + S ++F TC LL+++L LG A + SQ RL AL +FK+ +
Sbjct: 274 LTVVVPARKVRSAIIFCSTCRGCHLLSVLLEELGLPAAALHSGKSQKARLSALARFKSEQ 333
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVASRGLDIP+VD+V+NYD+P ++DY+HRVGRTARAGR+G ++SLV QY+++
Sbjct: 334 VPLLLATDVASRGLDIPTVDLVVNYDLPVLARDYVHRVGRTARAGRSGWSLSLVTQYDVQ 393
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVL 387
IE+LIG KL E +E+EVL
Sbjct: 394 LVHAIEELIGHKLDEHKLDEDEVL 417
>gi|29612573|gb|AAH49396.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 482
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 194/433 (44%), Positives = 265/433 (61%), Gaps = 23/433 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL L++ C +G PS +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 7 FSSLGLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQK 66
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ +++GG+DM+ Q L L
Sbjct: 67 LSE------DPFGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIIGGMDMVAQALEL 120
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PHIV+ATPGRL DH+ ++ FS+ +++LV+DEADRLL DF + L IL +P
Sbjct: 121 SRKPHIVIATPGRLADHIRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTQDLQVILEAVP 180
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++L+ + P E+ S+ TV+ L Q+Y VP K KD YLVY
Sbjct: 181 AQRQTLLFSATLTDTLQELKTVAMNKPFFWESTSEVRTVEQLDQRYILVPEKVKDAYLVY 240
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S M+FT TC ++L +MLR ++ + M Q +R AL KFK+
Sbjct: 241 LIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSVALHSMMKQKQRFAALAKFKSS 300
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR G+AI+LV QY++
Sbjct: 301 VFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGMAITLVTQYDI 360
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE I KL EF +E EVL +L +V A+R ++ + K NKR++
Sbjct: 361 HLVHAIEGQINMKLEEFKVKENEVLKILTQVNVARRECEIKLECTDFDEKKEINKRKQLI 420
Query: 414 -KGGDEDDDIGRQ 425
+G D D + R+
Sbjct: 421 LEGKDPDLEAKRK 433
>gi|359494643|ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
vinifera]
gi|297736137|emb|CBI24175.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/412 (46%), Positives = 272/412 (66%), Gaps = 11/412 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LGL + V+AC+ +G + P+ +Q IP L G D++GLAQTGSGKT AFALPIL
Sbjct: 52 TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILH 111
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L AE+ V FA V++PTRELA Q++EQF ALGS + LRCAV+VGG+DM+ Q
Sbjct: 112 RL---AEDPFGV---FALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQT 165
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +RPH+V+ATPGR+ L K+LVLDEADR+L+ FE+ L + +P
Sbjct: 166 LMQRPHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLP 225
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT LFSATMT ++ L EA + TV++LKQQY FVP KD YL++
Sbjct: 226 KNRQTLLFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLH 285
Query: 247 ILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
IL+ E+ S ++F TC + LL+L+L L + SQS RL A+++FK+G+
Sbjct: 286 ILSKMEEMGIRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQ 345
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLDIP+VD+V+NYDIP +DY+HRVGRTARAGR G+++S+V Q +++
Sbjct: 346 VPILLATDVASRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVD 405
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE ++GK+L +F +E+EVL + +V +A+R++ M + D G + + K
Sbjct: 406 LIHEIEAVLGKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAKA 457
>gi|57101724|ref|XP_541930.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Canis lupus familiaris]
Length = 488
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 TRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I K+L E EE +VL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKQLEELSVEEAKVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|281343550|gb|EFB19134.1| hypothetical protein PANDA_000569 [Ailuropoda melanoleuca]
Length = 457
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 TRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL E EE +VL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLEELSVEEAKVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|67972435|ref|NP_001020093.2| probable ATP-dependent RNA helicase DDX49 [Mus musculus]
gi|76364172|sp|Q4FZF3.1|DDX49_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX49; AltName:
Full=DEAD box protein 49
gi|71051022|gb|AAH99554.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Mus musculus]
Length = 480
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F E+GL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ F++ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ ++ S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I ++L E EE EVL +L +V +R ++ ++ S NKR++
Sbjct: 358 HLLHAIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQQNRR 442
>gi|301753949|ref|XP_002912858.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Ailuropoda melanoleuca]
Length = 477
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 TRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL E EE +VL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQIKKKLEELSVEEAKVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|255544594|ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 502
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/408 (47%), Positives = 262/408 (64%), Gaps = 11/408 (2%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E F LGL + V C+ +G K P+ +QA IP LEGKD++GLAQTGSGKT FALP
Sbjct: 61 ETSLFSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFALP 120
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
IL L AE+ + FA V++PTRELA Q++EQF ALGS ++LRCAV+VGG+D + Q
Sbjct: 121 ILHRL---AEDPYGI---FALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQ 174
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILN 183
L RPH+V+ATPGR+ L + K+LVLDEADR+L+ FE L +
Sbjct: 175 AKTLMARPHVVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQ 234
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ RQT LFSATMT ++ L EA + TVDTLKQQY VP KD Y
Sbjct: 235 CLPKNRQTLLFSATMTSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVY 294
Query: 244 LVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
LVYIL+ ++ S ++F TC LL+L+L L + + SQS RL AL +FK
Sbjct: 295 LVYILSKMEDMGIRSAIIFVSTCRTCYLLSLLLEELEKEPAALHSFKSQSLRLSALRRFK 354
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G+ +ILI TDVASRGLDIP+VD+V+NYD+P +DY+HRVGRTARAGR G+A+S ++Q
Sbjct: 355 SGQASILIATDVASRGLDIPTVDLVVNYDLPRYPRDYVHRVGRTARAGRGGLAMSFISQN 414
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
+ +IE ++GK+L EF +E EVL + ++ +A+ ++ M + D G
Sbjct: 415 DFVLIREIEAVLGKQLGEFECKENEVLSDITKIFKARHVATMKMLDDG 462
>gi|109124055|ref|XP_001115617.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Macaca
mulatta]
Length = 527
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/433 (45%), Positives = 264/433 (60%), Gaps = 23/433 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LV C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQ 425
+G D D + R+
Sbjct: 418 LEGKDPDLEAKRK 430
>gi|357451623|ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355485136|gb|AES66339.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 513
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/416 (46%), Positives = 265/416 (63%), Gaps = 11/416 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E TF +LGL + V+ C+ +G KTP ++Q IP L G+ +IG+ QTGSGKT AFA
Sbjct: 48 ENTTATFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFA 107
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPILQ L AE+ V FA V++PTRELA Q++EQF ALGS + LR AV+VGG+DM+
Sbjct: 108 LPILQRL---AEHTFGV---FALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDML 161
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEI 181
+QT L RPH+V+ATPGR+ L + + K+LVLDEADR+L+ F+ L I
Sbjct: 162 RQTKELVARPHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFI 221
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+P RQ FSAT T ++KL+ EA + TV+ LKQQ F+P KD
Sbjct: 222 FQCLPENRQNLFFSATTTSNLQKLRERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKD 281
Query: 242 CYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
YL++IL+ ++ S +VF TC L LML L Q A + SQ++RL AL+
Sbjct: 282 VYLLHILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHD 341
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK+G+ +L+ TDVA RGLDIP+VD+VINYD+P +DYIHRVGRTARAGR G+A+SLV
Sbjct: 342 FKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVT 401
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
Q +++ +IE LI ++L +E EVL L+++V AK +++M + D G + + K
Sbjct: 402 QNDVDLIREIETLIERQLEMIEYKENEVLSLMKKVFSAKNVAKMKMMDDGFEEKAK 457
>gi|326934515|ref|XP_003213334.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Meleagris gallopavo]
Length = 482
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/440 (45%), Positives = 269/440 (61%), Gaps = 23/440 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ELGL LVE +G P+ +QA IP L+G+D +G A+TGSGKT AF LP+LQ
Sbjct: 4 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQV 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ V+VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FSL LK+LVLDEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T + +L+ + P EAAS+ TVD L Q+Y VP KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEAVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT+TC ++L +MLR ++ + M Q +R AL KFK+
Sbjct: 238 LIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR G++I++V QY++
Sbjct: 298 IFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KL EF EE+ VL +L V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEEIKLKLQEFSVEEKLVLDILNHVNVTRRECEIELEYMDFDEKKEINKRKQMI 417
Query: 414 -KGGDEDDDIGRQFGINKKK 432
+G D D + R+ + K K
Sbjct: 418 LEGKDPDLEEKRKAELAKIK 437
>gi|148696858|gb|EDL28805.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Mus musculus]
Length = 545
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F E+GL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 8 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 67
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 68 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 121
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ F++ +++LV+DEADRLL DF L+ IL +P
Sbjct: 122 SRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVP 181
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 182 ARRQTLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVH 241
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ ++ S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 242 LVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 301
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 302 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 361
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I ++L E EE EVL +L +V +R ++ ++ S NKR++
Sbjct: 362 HLLHAIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMI 421
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 422 LEGKDPDLEAKRKAELAKIKQQNRR 446
>gi|395513190|ref|XP_003760812.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Sarcophilus
harrisii]
Length = 509
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/439 (44%), Positives = 269/439 (61%), Gaps = 23/439 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELGL LV C+ +G K P+ +Q +P LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 3 SFAELGLASWLVAQCKQLGLKHPTPVQQNCVPAILEGRDCMGCAKTGSGKTAAFVLPILQ 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L
Sbjct: 63 KLSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKECIIVGGMDMVAQALE 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVI 185
L ++PH+V+ATPGRL DHL ++ F++ +++LV+DEADRLL DF K L+ I +
Sbjct: 117 LSRKPHVVIATPGRLADHLRSSSTFNIKKIRFLVMDEADRLLEQGCTDFTKDLEVIFDAA 176
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT+T +K LQ P EA ++ TV+ L Q+Y VP K KD YLV
Sbjct: 177 PTQRQTLLFSATLTDTLKVLQGIAANRPFFWEAQAEVRTVEQLDQRYLLVPEKVKDAYLV 236
Query: 246 YILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
+++ E + S ++FT TC ++L +MLR ++ + M Q R AL KFK+
Sbjct: 237 HLIQTFHDEHADWSIIIFTSTCKTCQILNMMLRKFNFPSVALHSMMKQKARFAALAKFKS 296
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G+AI+LV QY+
Sbjct: 297 SVYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRHGIAITLVTQYD 356
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR- 413
+ IE+ I KKL +F EE +VL +L +V +R ++ + K NKR++
Sbjct: 357 IHLLHAIEEEIKKKLDDFSVEEAKVLKILTQVNVVRRECEIKLEATDFDEKKEINKRKQL 416
Query: 414 --KGGDEDDDIGRQFGINK 430
+G D D + R+ + K
Sbjct: 417 ILEGKDPDLEAKRKAELAK 435
>gi|321466431|gb|EFX77426.1| hypothetical protein DAPPUDRAFT_213372 [Daphnia pulex]
Length = 478
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 185/432 (42%), Positives = 273/432 (63%), Gaps = 23/432 (5%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K V TF L + + L++ +N+G P+ +Q IP L+G+D IG +TGSGKT AFAL
Sbjct: 6 KAVSTFNSLKIDEWLIKQIKNLGVDKPTPVQINCIPAILDGRDCIGCDRTGSGKTFAFAL 65
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PI+Q L + +A VL+PTRELA QI++QF+ +G I+LR +V+VGG+ MM
Sbjct: 66 PIVQTL------SKDPYGIYALVLTPTRELAYQIADQFQIIGKPINLRMSVIVGGMGMMD 119
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q + L PHIV+ATPGRL DHL + K FS T+KYLV+DEADRLL +F++ L I
Sbjct: 120 QGIELSNHPHIVIATPGRLADHLESCKTFSFKTIKYLVMDEADRLLEGNFDEQLQIIFQA 179
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P RQT LFSAT+T + KL+ L P A + +TV+ L Q+Y VPA +KD YL
Sbjct: 180 LPEKRQTLLFSATITDTLNKLREVALNKPFMWSAPVETATVEELDQRYILVPADFKDGYL 239
Query: 245 VYILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
V+++ E S +VFT TC + ++L++ L LG +++ + MSQ +R+ L KF+
Sbjct: 240 VHVVQNFREEKPKGSIIVFTDTCRSCQILSMTLLELGFQSLCLHSMMSQRERIATLTKFR 299
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ IL+ TDVASRGLDIP+V +++N+++P+N K+Y+HRVGRTARAGR G +++L+
Sbjct: 300 SNTVKILVATDVASRGLDIPTVQLIVNHNVPSNPKEYVHRVGRTARAGRGGFSLTLITPN 359
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
+++ IE I K+L EF +E+EV+ +L +V KR ++ + ++
Sbjct: 360 DIKLLHAIEGRICKELKEFKIKEKEVVKILTQVAVTKREQEINL-------------DEQ 406
Query: 421 DIGRQFGINKKK 432
D G + INK+K
Sbjct: 407 DFGEKKRINKRK 418
>gi|47217410|emb|CAG00770.1| unnamed protein product [Tetraodon nigroviridis]
Length = 456
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/438 (43%), Positives = 268/438 (61%), Gaps = 23/438 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL D LV+ C+ +G P+ +Q +P L+G+D +G A+TGSGKT AF LP+LQ
Sbjct: 4 FSSLGLSDWLVKQCKQLGIHKPTPVQENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + LR ++VGG+DM+ Q L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIVVGGMDMVSQASEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
+PH+VVATPGRL DH+ ++ FS+ +++L++DEADRLL DF K L+ I+ +P
Sbjct: 118 SNQPHVVVATPGRLADHIRSSSTFSMSKIQFLIMDEADRLLEQGCTDFTKDLETIMPALP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++L+ + P E+ S+ TVD L Q+Y P K KD YLV+
Sbjct: 178 AKRQTLLFSATLTDTLQELKNIAMNKPFFWESKSETRTVDELDQRYILTPEKVKDAYLVH 237
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ + S ++FT TC ++L +ML+ I + M Q +R L KFKA
Sbjct: 238 LIQTFTDQHDDWSIIIFTNTCKNCQILTMMLQQFNFPTISLHSMMKQKQRFANLAKFKAS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR GV+I+LV QY++
Sbjct: 298 VYKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KL EFP EE+EVL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHSIEEQIQTKLKEFPVEEKEVLKILTQVNVTRRECEIRLESTDFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINK 430
+G D D + R+ + K
Sbjct: 418 LEGKDPDLEAKRKAELEK 435
>gi|147772471|emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
Length = 592
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/412 (46%), Positives = 272/412 (66%), Gaps = 11/412 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LGL + V+AC+ +G + P+ +Q IP L G D++GLAQTGSGKT AFALPIL
Sbjct: 155 TFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILH 214
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L AE+ V FA V++PTRELA Q++EQF ALGS + LRCAV+VGG+DM+ Q
Sbjct: 215 RL---AEDPFGV---FALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQT 268
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +RPH+V+ATPGR+ L K+LVLDEADR+L+ FE+ L + +P
Sbjct: 269 LMQRPHVVIATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLP 328
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT LFSATMT ++ L EA + TV++LKQQY FVP KD YL++
Sbjct: 329 KNRQTLLFSATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLH 388
Query: 247 ILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
IL+ E+ S ++F TC + LL+L+L L + SQS RL A+++FK+G+
Sbjct: 389 ILSKMEEMGIRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQ 448
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVASRGLDIP+VD+V+NYDIP +DY+HRVGRTARAGR G+++S+V Q +++
Sbjct: 449 VPILLATDVASRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVD 508
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE ++GK+L +F +E+EVL + +V +A+R++ M + D G + + K
Sbjct: 509 LIHEIEAVLGKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAKA 560
>gi|432854582|ref|XP_004067972.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Oryzias
latipes]
Length = 469
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/418 (44%), Positives = 260/418 (62%), Gaps = 20/418 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL D LV+ C+ +G P+ +Q +P LEG+D +G A+TGSGKT AF LP+LQ
Sbjct: 4 FHSLGLSDWLVKQCKQLGIDKPTPVQENCVPAILEGRDCLGCAKTGSGKTAAFVLPVLQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
K+PH+VVATPGRL DH+ ++ FS+ +K+L+LDEADRLL DF K L+EIL +P
Sbjct: 118 SKQPHVVVATPGRLADHVRSSNTFSMRKIKFLILDEADRLLEQGCTDFTKDLEEILGTLP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++L+ + P E+ S+ TV+ L Q+Y P K KD YLV+
Sbjct: 178 AKRQTLLFSATLTDTLQELKSIAMNKPFFWESTSETRTVEELDQRYILTPEKVKDAYLVH 237
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ + S ++FT TC ++L +MLR I + M Q +R L KFKA
Sbjct: 238 LIQTFTDKHDDWSIIIFTNTCKNCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKAS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR GV+I+LV QY++
Sbjct: 298 VYKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR 413
IE+ KL E+P EE+EV +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHSIEEQTKTKLTEYPVEEKEVHKILTQVNVTRRECEIRLESTDFDEKKEINKRKQ 415
>gi|307167913|gb|EFN61290.1| Probable ATP-dependent RNA helicase DDX49 [Camponotus floridanus]
Length = 457
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/432 (45%), Positives = 275/432 (63%), Gaps = 24/432 (5%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E+K F +L L L+ C+ +G K P+ IQ IP L G+D IG A+TGSGKT AFALP
Sbjct: 3 EIKDFSDLKLNSWLLAQCDTMGLKNPTLIQQNCIPRILAGEDCIGCAKTGSGKTLAFALP 62
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ L E FA VL+PTRELA QI++QF A+G I+L+ V+VGG+DMM Q
Sbjct: 63 ILQKLCEDPY------GIFALVLTPTRELAFQIADQFAAIGKAINLKKCVVVGGMDMMVQ 116
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L L KRPHIVVATPGRL DHL + FSL +K+LVLDEADRLL F+K L +I +
Sbjct: 117 GLELSKRPHIVVATPGRLADHLDSCDTFSLQKIKFLVLDEADRLLGGHFDKQLKKIFAAV 176
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKI---EAASKYSTVDTLKQQYRFVPAKYKDC 242
P+ +Q LFSATMT + K+++ + V I E + +TV L Q+Y P D
Sbjct: 177 PKQKQVLLFSATMTDALDKVKQIA-SSKVFIWEEEDDAGIATVRELDQRYVLCPKDVLDS 235
Query: 243 YLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
+LV ++ A+ S M+FT TC +LL++ML ++G + + + Q +RL AL+K
Sbjct: 236 FLVEVIRTFRATNKNGSIMIFTDTCKHCQLLSMMLNDVGFTNMALHAMIKQKERLAALSK 295
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK+ ILI TDVA+RGLDIP+V++V+N+ IP K+YIHRVGRTARAGR G+AISL+
Sbjct: 296 FKSNHVQILIATDVAARGLDIPTVELVVNHIIPNVPKEYIHRVGRTARAGRNGMAISLIT 355
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKR 411
+++ IE IG KL E+ +++E++ +L +++ AKR +++ + ++ NKR
Sbjct: 356 PNDIKLLHMIEDTIGTKLTEYKVDDKEIVTILTQISVAKREAEIRLDETDFYEKKMINKR 415
Query: 412 RR---KGGDEDD 420
++ +G D D+
Sbjct: 416 KKLILEGKDPDE 427
>gi|356528665|ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 587
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/410 (46%), Positives = 264/410 (64%), Gaps = 11/410 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL + V+ C +G + P +Q IP LEG+ ++G+ +TGSGKT AFALPIL
Sbjct: 64 FGDLGLAEWAVKTCRELGMRRPRPVQRRCIPRVLEGRHVLGIDETGSGKTAAFALPILHR 123
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L AE+ V FA V++PTRELA Q++EQF ALGS + LR V+VGG+DM++QT L
Sbjct: 124 L---AEHPFGV---FALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQTKEL 177
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
RPH+V+ATPGR+ L N K+LVLDEADR+L+ F++ L I +P
Sbjct: 178 AARPHLVIATPGRIHALLRNNPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQCLPE 237
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQ FSAT T ++KL+ EA + TV+TLKQQ F+P K KD YL++I
Sbjct: 238 NRQNLFFSATTTSNLQKLRERYQDKMYVYEAYEGFKTVETLKQQAIFIPKKVKDVYLMHI 297
Query: 248 LT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
L ++ S +VF TC L+LML L Q A + SQ++RL AL++FK+G+
Sbjct: 298 LAKMEDMGIRSAIVFISTCRDCHRLSLMLEVLDQEAAALYSFKSQAQRLEALHQFKSGKV 357
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+IL+ TDVASRGLDIP+VD+VINYD+P +DYIHRVGRTARAGR G+A+SLV Q +++
Sbjct: 358 SILLATDVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDL 417
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+IE LI K+L +E EVL L+++V AK +++M + D G + + K
Sbjct: 418 IHEIEALIEKQLEMIEYKENEVLSLMKKVFSAKNVAEMKMIDDGFEEKAK 467
>gi|384246378|gb|EIE19868.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 508
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 267/400 (66%), Gaps = 19/400 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LG+ + L C+++G P+++Q IP L G+D++G A TGSGKT AFALPILQ
Sbjct: 81 TFRSLGISEWLDRVCKSLGMVRPTQVQRGCIPAILGGRDVLGTAHTGSGKTAAFALPILQ 140
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L R FA VL+PTRELA+Q+++QF ALGSG+SL AV++GG+DM Q A
Sbjct: 141 RL------AREPYGIFALVLTPTRELAMQLADQFRALGSGMSLTDAVVIGGLDMQSQAKA 194
Query: 129 LGKRPHIVVATPGRLMD----HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
L +RPHI+VATPGRL D H +GF+ + +LVLDEADRLL FE L I +
Sbjct: 195 LAQRPHIIVATPGRLRDLLSAHADLAEGFN--RVAFLVLDEADRLLEPTFESELRVIASH 252
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDT---LKQQYRFVPAKYKD 241
+P RQT LFSAT+T+ + LQ + L++ +A Y ++T L++ Y F+PAK ++
Sbjct: 253 LPAQRQTLLFSATLTRSLATLQASALRDAFLFQA-DAYEGLETAVNLREDYLFIPAKVRE 311
Query: 242 CYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
YLV++L E S S +VF TC LL+L+L LG ++ + H++Q +RL AL++
Sbjct: 312 LYLVHVLESLEEFSIRSAIVFCSTCRGCHLLSLLLAELGVASVALHSHLTQGRRLAALHR 371
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK+G IL+ TDVASRGLDIP+VD+V+NY++P+ +DY+HRVGRTARAGR G A+SLV
Sbjct: 372 FKSGGVPILLATDVASRGLDIPTVDLVVNYELPSLPRDYVHRVGRTARAGRGGWALSLVT 431
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
QY++E IE LIG +L EF +E +VL + RV AKR
Sbjct: 432 QYDVELVQHIESLIGHQLREFTLDEAQVLKGITRVYSAKR 471
>gi|45361669|ref|NP_989409.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
gi|40787696|gb|AAH64887.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
Length = 479
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/433 (44%), Positives = 265/433 (61%), Gaps = 23/433 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL L++ C +G PS +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FSRLGLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSE------DPFGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DH+ ++ FS+ +++LVLDEADRLL DF + L IL +P
Sbjct: 118 SRKPHVVIATPGRLADHIRSSNTFSIKKIRFLVLDEADRLLEQGCTDFTQDLQVILEAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++L+ + P E+ S+ TV+ L Q+Y VP K KD YLV+
Sbjct: 178 AQRQTLLFSATLTDTLQELKTIAMNKPFFWESTSEVRTVEQLDQRYILVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S M+FT TC ++L +MLR ++ + M Q +R AL KFK+
Sbjct: 238 LIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSVALHSMMKQKQRFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR G+AI+LV QY++
Sbjct: 298 VFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGMAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KL EF +E EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQINMKLEEFKVKESEVLKILTQVNVTRRECEIKLECTDFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQ 425
+G D D + R+
Sbjct: 418 LEGKDPDLEAKRK 430
>gi|15219185|ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
gi|75336890|sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|4966350|gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family [Arabidopsis thaliana]
gi|332191310|gb|AEE29431.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
Length = 491
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/414 (46%), Positives = 269/414 (64%), Gaps = 15/414 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ LGL + VE C+ +G + P+ +Q +P L G+D++GLAQTGSGKT AFALPIL
Sbjct: 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L AE+ V FA V++PTRELA Q++EQF+ALGS ++LRC+V+VGG+DM+ QT++L
Sbjct: 120 L---AEDPYGV---FALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
RPHIV+ TPGR+ L N K+LVLDEADR+L+ F+ L I +P+
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 233
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT LFSATMT ++ L EA TVDTL QQ+ F K+ YLV+I
Sbjct: 234 SRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHI 293
Query: 248 LTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
L+++ S M+F TC + L+LML L I + SQS RL AL+KFK+G+
Sbjct: 294 LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 353
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
IL+ TDVASRGLDIP+VD+VINYDIP + +DY+HRVGRTARAGR G+A+S++ + +++
Sbjct: 354 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 413
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN----KRRRK 414
+IE+ +GKK+ + + L + +V++AKR++ M + D+G K RRK
Sbjct: 414 IHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRK 467
>gi|159467789|ref|XP_001692074.1| hypothetical protein CHLREDRAFT_128577 [Chlamydomonas reinhardtii]
gi|158278801|gb|EDP04564.1| predicted protein [Chlamydomonas reinhardtii]
Length = 488
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 256/382 (67%), Gaps = 10/382 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL + L C+++G P+ +Q IP L+G+D+IGLAQTGSGKT AFALPILQA
Sbjct: 107 FKGLGLSEWLCGVCKSLGMSQPTDVQRGCIPAILKGRDVIGLAQTGSGKTAAFALPILQA 166
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L A++ V FA VL+PTRELA+QISEQF ALG+G+ L+ V++GGVDM QQ L
Sbjct: 167 L---AKDPYGV---FALVLTPTRELAVQISEQFRALGAGMRLKELVVIGGVDMQQQAREL 220
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPH+VVATPGRL D + + + ++LVLDEADR+L+ FE L IL +P R
Sbjct: 221 AKRPHVVVATPGRLADWVMSGLAAGMARCRFLVLDEADRVLDSTFEDDLRRILKALPAAR 280
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATMTK + LQR L + +A T D LK++Y F+PAK K+ YL ++LT
Sbjct: 281 QTLLFSATMTKSLIALQRQSLADAHVFQAYEGLRTADKLKEEYLFLPAKVKEVYLHHLLT 340
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
V S ++F TC LL+L+L LG A+ + SQ RL AL +FK+ +
Sbjct: 341 VVLPARKVRSAIIFAGTCRGCHLLSLLLEELGLPAVALHSGKSQKGRLAALARFKSEQVP 400
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVASRGLDIPSVD VIN+D+P ++DY+HRVGRTARAGR+G ++SLV QY++
Sbjct: 401 LLLATDVASRGLDIPSVDAVINFDLPMLARDYVHRVGRTARAGRSGWSVSLVTQYDVGLV 460
Query: 366 LQIEKLIGKKLPEFPAEEEEVL 387
IE+LIG L + EE+EVL
Sbjct: 461 GAIEELIGHTLEQHVLEEQEVL 482
>gi|149036001|gb|EDL90667.1| rCG38846 [Rattus norvegicus]
Length = 497
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL L LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ F++ +++LVLDEADRLL DF L+ IL+ +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLKELQGLATNQPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ ++ S ++FT TC ++L +MLR + + M Q +R AL +FK+
Sbjct: 238 LVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 TYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I ++L E EE +VL +L +V +R ++ ++ S NKR++
Sbjct: 358 HLLHAIEEEIKQQLAELAVEEAQVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQQNRR 442
>gi|346466157|gb|AEO32923.1| hypothetical protein [Amblyomma maculatum]
Length = 487
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 186/409 (45%), Positives = 261/409 (63%), Gaps = 10/409 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+L L +++ + +G K PS IQ IP L GKD IG A+TGSGKT AFALPILQ
Sbjct: 31 TFKDLKLNKWMIDQLDTLGIKNPSPIQENCIPAILNGKDCIGCAKTGSGKTLAFALPILQ 90
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA +L+PTRELA QISEQF+ +G LR V+VGG+DM+ Q
Sbjct: 91 KLFEDPY------GIFALILTPTRELAFQISEQFKVVGKAAGLRDCVIVGGMDMVTQGQI 144
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + PH+VVATPGRL DHL + F+L +++LVLDEADRLL F + L I +P+
Sbjct: 145 LAESPHVVVATPGRLADHLESCNTFTLKRIRFLVLDEADRLLEGHFNEQLKTIFAALPKK 204
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT+T +++L+ + +P A S TV+ L Q+Y P ++ YLV+IL
Sbjct: 205 RQTLLFSATITATLEELRNIAMTDPFFYTAPSDVVTVEELDQRYVLTPVSVREAYLVHIL 264
Query: 249 TEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+ S S ++FT TC ++L++ L++LG P+ M Q RL +L+ FK+
Sbjct: 265 HKFLDSMPKGSVIIFTGTCKGCQVLSIALKSLGFPNAPLHSQMPQRVRLASLSTFKSNTT 324
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+L+ TDVASRGLDIPSV++V+N+++P+ KDY+HRVGRTARAGR G AI+LV Q+++
Sbjct: 325 RVLVATDVASRGLDIPSVELVLNHNVPSAPKDYVHRVGRTARAGRGGKAITLVTQHDVHL 384
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
IE+LI KL P +E EVL +L +V+ A R +++ + + + R+
Sbjct: 385 VTAIEELIKTKLVLQPTKEPEVLKILTQVSVALREAEIRLDEQDFEERK 433
>gi|297850038|ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
gi|297338742|gb|EFH69159.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 190/407 (46%), Positives = 265/407 (65%), Gaps = 11/407 (2%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
V F+ LGL + VE C+ +G + P+ +Q +P L G+D++GLAQTGSGKT AFALPI
Sbjct: 53 VANFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPI 112
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L L AE+ V FA V++PTRELA Q++EQF+ALGS ++LRC+V+VGG+DM+ QT
Sbjct: 113 LHRL---AEDPYGV---FALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQT 166
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
+L RPHIV+ TPGR+ L N K+LVLDEADR+L+ F+ L I
Sbjct: 167 RSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQC 226
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ RQT LFSATMT ++ L EA TVDTL QQ+ F K+ YL
Sbjct: 227 LPKSRQTLLFSATMTSNLQTLLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYL 286
Query: 245 VYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
V+IL+++ S M+F TC + L+LML L + + SQS RL AL+KFK+
Sbjct: 287 VHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENVAMHSLNSQSMRLSALSKFKS 346
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ IL+ TDVASRGLDIP+VD+VINYDIP N +DY+HRVGRTARAGR G+A+S++ + +
Sbjct: 347 GKIPILLATDVASRGLDIPTVDLVINYDIPRNPRDYVHRVGRTARAGRGGLAVSIITETD 406
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
++ +IE+ +GKK+ + + L + +V++AKR++ M + D+G
Sbjct: 407 VKLIHKIEEEVGKKMEPYNNKIITDSLEVTKVSKAKRVAMMRMLDNG 453
>gi|410921858|ref|XP_003974400.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Takifugu
rubripes]
Length = 477
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 189/438 (43%), Positives = 269/438 (61%), Gaps = 23/438 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL D L++ C+ +G + + +Q +P L+G+D +G A+TGSGKT AF LP+LQ
Sbjct: 4 FSSLGLSDWLIKQCKQLGIQKATPVQENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
+PH+VVATPGRL DH+ ++ FSL +++L++DEADRLL DF K L+ IL +P
Sbjct: 118 SNQPHVVVATPGRLADHIRSSSTFSLAKIQFLIMDEADRLLEQGCTDFTKDLETILTAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++L+ + P E+ S+ TV+ L Q+Y P K KD YLV+
Sbjct: 178 AKRQTLLFSATLTDTLQELKHIAMNKPFFWESKSETRTVEELDQRYILTPEKVKDAYLVH 237
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ + S ++FT TC ++L +ML+ I + M Q +R L KFKA
Sbjct: 238 LIQTFTDQHDDWSIIIFTSTCKDCQILTMMLQKFHFPTISLHSMMKQKQRFANLAKFKAS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR GV+I+LV QY++
Sbjct: 298 VYKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KL EFP EE+EVL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHSIEEQIQTKLKEFPVEEKEVLKILTQVNVTRRECEIRLESTDFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINK 430
+G D D + R+ + K
Sbjct: 418 LEGKDPDLEAKRKAELEK 435
>gi|169234830|ref|NP_001108495.1| probable ATP-dependent RNA helicase DDX49 [Rattus norvegicus]
gi|165971701|gb|AAI58856.1| Ddx49 protein [Rattus norvegicus]
Length = 480
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL L LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ F++ +++LVLDEADRLL DF L+ IL+ +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + V+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLKELQGLATNQPFFWEAQATVRMVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ ++ S ++FT TC ++L +MLR + + M Q +R AL +FK+
Sbjct: 238 LVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 TYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I ++L E EE +VL +L +V +R ++ ++ S NKR++
Sbjct: 358 HLLHAIEEEIKQQLAELAVEEAQVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQQNRR 442
>gi|348523239|ref|XP_003449131.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Oreochromis
niloticus]
Length = 480
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 259/412 (62%), Gaps = 13/412 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL D LV+ C+ +G P+ +Q +P L+G+D +G A+TGSGKT AF LP+LQ
Sbjct: 4 FSSLGLSDWLVKQCKQLGINKPTPVQENCMPAILQGRDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
+PH+VVATPGRL DH+ ++ FS+ +++L+LDEADRLL DF K L+ IL ++P
Sbjct: 118 SNQPHVVVATPGRLADHIRSSNTFSMKRIQFLILDEADRLLEQGCTDFTKDLEVILEILP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++L+ + P E+ S+ TV+ L Q+Y P K KD YLV+
Sbjct: 178 AKRQTLLFSATLTDTLQELKSIAMNKPFFWESKSETRTVEELDQRYILTPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC + ++L +MLR I + M Q +R L KFKA
Sbjct: 238 LIQTFTDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQKQRFANLAKFKAS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR GV+I+LV QY++
Sbjct: 298 VYKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
IE+ I KL E+P E+EVL +L +V +R ++ ++ + +R+
Sbjct: 358 HLIHSIEEQIQTKLKEYPVVEKEVLKILTQVNVTRRECEIKLESTDFDEKRE 409
>gi|399949627|gb|AFP65285.1| DEAD box protein [Chroomonas mesostigmatica CCMP1168]
Length = 398
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/390 (46%), Positives = 257/390 (65%), Gaps = 6/390 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LG+ ++L ++G+K P+KIQ IPHAL KD+IG AQTGSGKT A+ LPI+Q
Sbjct: 3 TFKDLGICEQLNRITVSLGYKKPTKIQIFTIPHALNKKDIIGYAQTGSGKTIAYLLPIVQ 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L+ ++++ F + ++ P RELA QI+ FEA G+ +R AV+VGG++ Q
Sbjct: 63 NLII----RKSI--FNSLIIVPARELAFQIASHFEAFGNIFGIRIAVVVGGINAGPQKAL 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ PHI+++TPGRL+DHL T L + VLDEADRLL+ DF+K IL+ + R
Sbjct: 117 IFMNPHILISTPGRLVDHLAKTIKLKLDKISIFVLDEADRLLHLDFKKEFLIILSELSRT 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+Q++LFSATMT K++KLQ+ +K PVKIE KY V TL Q Y F+P K+K+ Y V++
Sbjct: 177 KQSFLFSATMTSKIEKLQKNFMKAPVKIEIHQKYKAVKTLIQNYIFIPRKFKEIYFVFLC 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E SS + F T + L+++ LG + I G + QSKR L+KFK GE +LI
Sbjct: 237 NEFIGSSILAFVDTQKYAEKITLLVKLLGFKGGCIHGGLKQSKRFENLHKFKLGEIKLLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDIP VD+VIN+D+P+ +K+YIHRVGRTARAG +G AI+L+ QY++ +I
Sbjct: 297 ATDLAARGLDIPCVDLVINFDLPSFAKEYIHRVGRTARAGNSGRAINLITQYDVSSCQKI 356
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
E LIG+K E + VL + + V E K+
Sbjct: 357 ESLIGEKFIELKYNPKFVLEIEKTVLETKK 386
>gi|332016384|gb|EGI57297.1| Putative ATP-dependent RNA helicase DDX49 [Acromyrmex echinatior]
Length = 461
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/409 (45%), Positives = 259/409 (63%), Gaps = 12/409 (2%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
KE+K F +L L L+ CE++G K P+ IQ IP L G+D IG A+TGSGKT AF L
Sbjct: 8 KEIKHFSDLKLNSWLLAQCESMGLKKPTPIQQNCIPRILMGEDCIGCAKTGSGKTLAFVL 67
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ L E FA VL+PTRELA QI++QF A+G I+L+ V+VGG+DMM
Sbjct: 68 PILQKLCEDPY------GIFALVLTPTRELAFQIADQFTAIGKAINLKKCVIVGGMDMMV 121
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L L KRPHIVVATPGRL DHL + FSL +K+LVLDEADRLL F+ L I
Sbjct: 122 QGLELSKRPHIVVATPGRLADHLDSCDTFSLQKIKFLVLDEADRLLGGHFDGQLKTIFAA 181
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY--STVDTLKQQYRFVPAKYKDC 242
+P+ +Q FSATMT + K+++ + + +TV L Q+Y P D
Sbjct: 182 LPKQKQVLFFSATMTDTLDKVKQIASAEVFTWQEEDDFGIATVKELDQRYVLCPKDVLDS 241
Query: 243 YLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
YLV ++ T S M+FT TC +LL++ML N+G + + + Q +RL ALNK
Sbjct: 242 YLVEVIKTFRTTNENGSIMIFTDTCKYCQLLSMMLNNVGFTNVALHAMIKQKERLAALNK 301
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK+ ILI TDVA+RGLDIP+V ++IN+ IP K+YIHRVGRTARAG+ G++ISL+
Sbjct: 302 FKSNHVQILIATDVAARGLDIPTVQLIINHVIPNVPKEYIHRVGRTARAGKNGMSISLIT 361
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
+++ IE +IG KL E+ ++++++ +L +V+ AKR +++ + ++
Sbjct: 362 PNDIKLLHAIENVIGIKLTEYKIDDKKIITILTQVSVAKRTAEIKLDET 410
>gi|71896415|ref|NP_001026109.1| probable ATP-dependent RNA helicase DDX49 [Gallus gallus]
gi|53130312|emb|CAG31485.1| hypothetical protein RCJMB04_6o15 [Gallus gallus]
Length = 402
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/396 (47%), Positives = 250/396 (63%), Gaps = 13/396 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ELGL LVE +G P+ +QA IP L+G+D +G A+TGSGKT AF LP+LQ
Sbjct: 4 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQV 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ V+VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FSL LK+LVLDEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRLLEQGCADFIADLEVILEAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T + +L+ + P EAAS+ TVD L Q+Y VP KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLNELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEAVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT+TC ++L +MLR ++ + M Q +R AL KFK+
Sbjct: 238 LIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR G++I++V QY++
Sbjct: 298 IFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
IE+ I KL EF EE+ VL +L V +R
Sbjct: 358 HLVHAIEEEIKLKLQEFSVEEKLVLDILTHVNVTRR 393
>gi|47937760|gb|AAH72323.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 429
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/410 (45%), Positives = 256/410 (62%), Gaps = 15/410 (3%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
GL L++ C +G PS +Q IP LEG+D +G A+TGSGKT AF LPILQ L E
Sbjct: 14 GLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSED 73
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
F VL+PTRELA QI+EQF LG + L+ +++GG+DM+ Q L L ++P
Sbjct: 74 PF------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIIGGMDMVAQALELSRKP 127
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIPRMRQ 190
HIV+ATPGRL DH+ ++ FS+ +++LV+DEADRLL DF + L IL +P RQ
Sbjct: 128 HIVIATPGRLADHIRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTQDLQVILEAVPAQRQ 187
Query: 191 TYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT- 249
T LFSAT+T +++L+ + P E+ S+ TV+ L Q+Y VP K KD YLVY++
Sbjct: 188 TLLFSATLTDTLQELKTVAMNKPFFWESTSEVRTVEQLDQRYILVPEKVKDAYLVYLIQK 247
Query: 250 ---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
E S M+FT TC ++L +MLR ++ + M Q +R AL KFK+ I
Sbjct: 248 FQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSVALHSMMKQKQRFAALAKFKSSVFKI 307
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR G+AI+LV QY++
Sbjct: 308 LIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGMAITLVTQYDIHLVH 367
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK--DSGNKRRRK 414
IE I KL EF +E EVL +L +V A+R ++ ++ D K+R K
Sbjct: 368 AIEGQINMKLEEFKVKENEVLKILTQVNVARRECEIKLECTDFDEKKRDK 417
>gi|356555223|ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 591
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 265/414 (64%), Gaps = 11/414 (2%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
+ +TF +LGL + V+ C +G + P +Q IP LEG+ ++G+ +TGSGKT AFALP
Sbjct: 67 DAETFGDLGLAEWAVKTCRELGMRRPRGVQRRCIPRVLEGRHVLGVDETGSGKTAAFALP 126
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
IL L AE+ V FA V++PTRELA Q++EQF ALGS + LR V+VGG+DM++Q
Sbjct: 127 ILHRL---AEHPFGV---FALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQ 180
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILN 183
L RPH+V+ATPGR+ L N K+LVLDEADR+L+ F++ L I
Sbjct: 181 AKELAARPHLVIATPGRIHALLRNNPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQ 240
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P RQ FSAT T ++KL+ EA + TV+TLKQQ F+P K KD Y
Sbjct: 241 CLPENRQNLFFSATTTSNLQKLRGRYQDKMYVYEAYEGFKTVETLKQQAIFIPKKVKDVY 300
Query: 244 LVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
L++IL ++ S +VF TC L+LML L Q A + SQ++RL AL++FK
Sbjct: 301 LMHILDKMEDMGIRSAIVFISTCRDCHRLSLMLEVLDQEAAALYSFKSQAQRLEALHQFK 360
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G+ +IL+ TDVASRGLDIP+VD+VINYD+P +DYIHRVGRTARAGR G+A+SLV Q
Sbjct: 361 SGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQN 420
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+++ +IE LI K+L +E + L L+++V AK +++M + D G + + K
Sbjct: 421 DVDLIHEIEALIEKQLEMIEYKENDALSLMKKVFSAKNVAEMKMIDDGFEEKAK 474
>gi|38198641|ref|NP_938179.1| probable ATP-dependent RNA helicase DDX49 [Danio rerio]
gi|28839770|gb|AAH47834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/413 (44%), Positives = 263/413 (63%), Gaps = 13/413 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LGL + L++ C+ +G P+ +Q + IP L+G+D +G A+TGSGKT AF LP+LQ
Sbjct: 3 TFESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQ 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L +E+ V F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L
Sbjct: 63 KL---SEDPYGV---FCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLE 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVI 185
L K+PH+VVATPGRL DH+ ++ +L +++L++DEADRLL DF K L+ IL+ +
Sbjct: 117 LSKKPHVVVATPGRLADHIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAV 176
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT+T +++LQ + P E S TV+ L Q++ P K KD YLV
Sbjct: 177 PAKRQTLLFSATLTDTLQQLQSIAMNRPFFWEHKSDVQTVEELDQRFILTPEKVKDAYLV 236
Query: 246 YILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
+++ E S ++FT TC + ++L +MLR I + M Q +R L KFK+
Sbjct: 237 HLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKS 296
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR GV+I+LV QY+
Sbjct: 297 NVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYD 356
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+ IE+ KL EFP EE+EVL +L +V +R ++ ++ + ++K
Sbjct: 357 IHLINAIEEQNQTKLKEFPIEEKEVLKILTQVNVTRRQCEIKLESTDFDEKKK 409
>gi|49903707|gb|AAH75762.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/413 (44%), Positives = 263/413 (63%), Gaps = 13/413 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LGL + L++ C+ +G P+ +Q + IP L+G+D +G A+TGSGKT AF LP+LQ
Sbjct: 3 TFESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQ 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L +E+ V F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L
Sbjct: 63 KL---SEDPYGV---FCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLE 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVI 185
L K+PH+VVATPGRL DH+ ++ +L +++L++DEADRLL DF K L+ IL+ +
Sbjct: 117 LSKKPHVVVATPGRLADHIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAV 176
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT+T +++LQ + P E S TV+ L Q++ P K KD YLV
Sbjct: 177 PAKRQTLLFSATLTDTLQQLQSIAMNRPFFWEHKSDVQTVEELDQRFILTPEKVKDAYLV 236
Query: 246 YILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
+++ E S ++FT TC + ++L +MLR I + M Q +R L KFK+
Sbjct: 237 HLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLVKFKS 296
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
ILI TDVA+RGLDIP+V +VIN++ P K YIHRVGRTARAGR GV+I+LV QY+
Sbjct: 297 NVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYD 356
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+ IE+ KL EFP EE+EVL +L +V +R ++ ++ + ++K
Sbjct: 357 IHLINAIEEQNQTKLKEFPIEEKEVLKILTQVNVTRRQCEIKLESTDFDEKKK 409
>gi|242050992|ref|XP_002463240.1| hypothetical protein SORBIDRAFT_02g040380 [Sorghum bicolor]
gi|241926617|gb|EER99761.1| hypothetical protein SORBIDRAFT_02g040380 [Sorghum bicolor]
Length = 502
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 265/412 (64%), Gaps = 14/412 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LGL LV+AC+ +G + P+ +Q IP AL G+D++G+A+TGSGKT AFALPIL
Sbjct: 77 TFADLGLSQWLVDACDALGMRRPTAVQRRCIPRALAGEDVLGIAETGSGKTAAFALPILH 136
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E+ V A L+PTRELA Q++EQF ALG+ + LRC +GG D + Q
Sbjct: 137 RL---GEDPYGVAAL---ALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLAQAKG 190
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +RPH+VVATPGR+ + + + K+LVLDEADR+L+ +FE+ L I +P
Sbjct: 191 LSRRPHVVVATPGRIATLVKDDPDLAKVFARTKFLVLDEADRVLDVNFEEELRVIFGCLP 250
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT+LFSATM+ ++ L EA + TV+TLKQQY VP + K+ +L Y
Sbjct: 251 KKRQTFLFSATMSDNLRSLLELSGNKSYFFEAYEGFKTVETLKQQYIHVPPQGKELHLWY 310
Query: 247 ILT------EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+L+ E S +VF C+ + L L+L LG A+ ++ H SQ++RL ALN+FK
Sbjct: 311 LLSIMKEKKEDPIRSAIVFVSKCNVCQYLDLLLEELGYPAVALNSHKSQAQRLLALNRFK 370
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+G+ ILI TDV SRGLDI +VD+VINYD+P + +DYIHRVGRTARA R G+AIS V Q
Sbjct: 371 SGQVPILISTDVGSRGLDIQTVDLVINYDMPMSPRDYIHRVGRTARASRGGLAISFVTQK 430
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
++ +IE ++GK+L + ++EV + +V +A+R+++M +D G+ +
Sbjct: 431 DICLLHEIEDVVGKQLEAYECNDKEVTKDITKVFKARRLAKMRSRDEGHDEK 482
>gi|126323567|ref|XP_001370574.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Monodelphis
domestica]
Length = 491
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 267/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL LV C +G K P+ +Q +P LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAKLGLASWLVAQCRQLGLKHPTPVQQNCVPAILEGRDCMGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPF------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ F++ +++LV+DEADRLL DF K L+ I + P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFNIKKIRFLVMDEADRLLEQGCTDFTKDLEVIFDAAP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K LQ P EA ++ TV+ L Q+Y VP K KD YLV+
Sbjct: 178 AQRQTLLFSATLTDTLKVLQGIATNKPFFWEAPAEVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR ++ + M Q R AL KFK+
Sbjct: 238 LIQTFQDEHEDWSIIIFTSTCKTCQVLNMMLRRFNFPSVALHSMMKQKARFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G+AI+LV QY++
Sbjct: 298 VYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRDGIAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KL +F EE VL +L +V +R ++ + K NKR++
Sbjct: 358 HLLHAIEEEIKMKLKDFSVEEATVLKILTQVNVVRRECEIKLEATDFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K + R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIRQKNRQ 442
>gi|355683302|gb|AER97082.1| DEAD box polypeptide 49 [Mustela putorius furo]
Length = 469
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/436 (44%), Positives = 264/436 (60%), Gaps = 23/436 (5%)
Query: 19 LVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQR 78
LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ L E
Sbjct: 1 LVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY--- 57
Query: 79 TVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVA 138
F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L ++PH+V+A
Sbjct: 58 ---GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIA 114
Query: 139 TPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIPRMRQTYLFS 195
TPGRL DHL ++ FS+ +++LV+DEADRL+ DF L+ IL +P RQT LFS
Sbjct: 115 TPGRLADHLRSSNTFSIKKIRFLVMDEADRLVEQGCTDFTVDLEAILAAVPARRQTLLFS 174
Query: 196 ATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT----EV 251
AT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+++ E
Sbjct: 175 ATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEH 234
Query: 252 SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTD 311
S ++FT TC ++L +MLR + + M Q +R AL KFK+ ILI TD
Sbjct: 235 EDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATD 294
Query: 312 VASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKL 371
VASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++ IE+
Sbjct: 295 VASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQ 354
Query: 372 IGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR---KGGDEDDD 421
I KKL EF EE VL +L +V +R ++ ++ + NKR++ +G D D +
Sbjct: 355 IKKKLEEFSVEEASVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLILEGKDPDLE 414
Query: 422 IGRQFGINKKKLSKRK 437
R+ + K K R+
Sbjct: 415 AKRKAELAKIKQKNRR 430
>gi|160331647|ref|XP_001712530.1| rrp3 [Hemiselmis andersenii]
gi|159765979|gb|ABW98205.1| rrp3 [Hemiselmis andersenii]
Length = 398
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/390 (45%), Positives = 254/390 (65%), Gaps = 6/390 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ EL C+ + P+KIQA+ IPHAL G+D+IG AQTGSGKT A+ LPI+Q
Sbjct: 3 SFDKLGISKELCRICKANNFFIPTKIQAKVIPHALNGRDIIGYAQTGSGKTIAYLLPIIQ 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L++ ++T AFF+ +L P+RELA QI+ FEA G+ ++ VLVGG++ Q
Sbjct: 63 NLVK----KKT--AFFSIILVPSRELAFQIASYFEAFGNIFGIKIVVLVGGLENFSQKAL 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L PHI++ TPGRL++HL + L+ LV+DEADRL DF+K I + +P+
Sbjct: 117 LSLNPHILICTPGRLIEHLEKFLKNKIKKLEILVIDEADRLFQLDFKKEFSIIFSELPKN 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+Q+ FSATM+ ++ LQ+ +KNPVKI+ KY V TL+Q Y F+P K KDCY +Y+
Sbjct: 177 KQSLFFSATMSLNLENLQKNNMKNPVKIQINRKYKVVKTLQQNYIFIPQKLKDCYFIYLC 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E + SS +VF T L+ + LG A + G M+Q+KRL L KF+ G+ ILI
Sbjct: 237 NEFNGSSILVFVDTQKCAEKKTLLAKFLGFNAEYLHGGMNQNKRLEILQKFRFGKIKILI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRGLDIP+VD+V+NYD+P +K+Y+HRVGRTARAG++G I++V QY++ +I
Sbjct: 297 ATDLASRGLDIPNVDLVLNYDLPHLAKEYLHRVGRTARAGKSGRTINIVTQYDIHLCQKI 356
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
E L+ +K + VL+L + V + K+
Sbjct: 357 ETLVQQKFILLNFKLAHVLILEQTVDKMKQ 386
>gi|440803376|gb|ELR24282.1| DEAD (AspGlu-Ala-Asp) box polypeptide 47 isoform 3, putative,
partial [Acanthamoeba castellanii str. Neff]
Length = 261
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/253 (65%), Positives = 202/253 (79%)
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL +PHI+ ATPGRL+ HL NTKGFSL +LKYLVLDEADRLLN D+E+ +D+IL +P+
Sbjct: 1 ALCLQPHIICATPGRLLFHLQNTKGFSLKSLKYLVLDEADRLLNMDYEEEIDQILACLPK 60
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT KVKKL+RA L NPVKI +SKYSTVDTL Q Y FVP K+KDCYLVY+
Sbjct: 61 ERHTYLFSATMTSKVKKLERASLANPVKISVSSKYSTVDTLLQNYVFVPEKFKDCYLVYL 120
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E +S +VF TC+ + +ALMLRNLG A+PI G MSQS+R+G+LN FK G+ NIL
Sbjct: 121 LNEFVGNSIIVFVATCNTAQRVALMLRNLGFEALPIHGKMSQSRRIGSLNTFKTGDRNIL 180
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVASRGLDIPSVD++INYDIP N KDYIHRVGRTARA R G A+S+V QY++E++ +
Sbjct: 181 LATDVASRGLDIPSVDLIINYDIPLNPKDYIHRVGRTARAQRAGRAVSVVTQYDIEFFQK 240
Query: 368 IEKLIGKKLPEFP 380
IE+L G K + P
Sbjct: 241 IEQLTGLKTGDVP 253
>gi|330040429|ref|XP_003239908.1| DEAD box protein [Cryptomonas paramecium]
gi|327206834|gb|AEA39010.1| DEAD box protein [Cryptomonas paramecium]
Length = 396
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 253/388 (65%), Gaps = 6/388 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LG+ +++V C++VG+K +KIQA+ IP+AL+ +D++G AQTGSGKT AF +PILQ+
Sbjct: 4 FKHLGVCEQIVRICDSVGFKYATKIQAKTIPYALKNRDILGYAQTGSGKTLAFVIPILQS 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL+ F++ V+ P+RELA Q++ E +G ++ +L G++ Q +
Sbjct: 64 LLKFQ------ITFYSFVIVPSRELAFQVASYIETIGYLFGIKIGLLTSGIEYATQISII 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ PH+++ TPGRL+++ T L +K +V DEADRL +DF+K ++ +P+ +
Sbjct: 118 KRSPHMMICTPGRLIEYTEKTDNLFLKNIKKIVFDEADRLFQNDFDKKFLSVVENLPKFK 177
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q++LFSATMT ++KL++ + NPVKI+ KY TV TL Q Y F+P K K+CYL YI
Sbjct: 178 QSFLFSATMTINIEKLKKISMSNPVKIKINKKYKTVSTLVQNYIFMPFKSKNCYLSYICN 237
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E S ++F T +A++L+ L + G +SQ KR L+ FK + IL+
Sbjct: 238 EFSDCLAIIFVDTQICAEKIAVLLKVLNFKVAYFHGKLSQDKRAKILHDFKLKKIKILVS 297
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+ASRG+DIP ++++INYDIP ++DYIHR+GRTARAG+TG I+LV QY++ Y +IE
Sbjct: 298 TDLASRGIDIPDIELIINYDIPLYTRDYIHRIGRTARAGKTGRVINLVTQYDISSYQKIE 357
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAK 397
L+ +KL EF +++L + +RV+ K
Sbjct: 358 ILLQRKLEEFKCNLKDILFISKRVSSVK 385
>gi|383851888|ref|XP_003701463.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Megachile rotundata]
Length = 449
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 187/428 (43%), Positives = 268/428 (62%), Gaps = 22/428 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L L LV+ C +G K P+ IQ IP L G+D IG A+TGSGKT AFALPILQ
Sbjct: 2 TFTTLNLNSWLVDQCNFMGLKNPTPIQQNCIPRILAGEDCIGCAKTGSGKTLAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA +L+PTRELA QI++QF A+G I L+ V+VGG+DM+ Q L
Sbjct: 62 KLSEDPY------GIFALILTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVIQGLE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K PHIVVATPGRL DHLT+ FSL +K+LVLDEADRLL F+ L I + +P+
Sbjct: 116 LSKHPHIVVATPGRLADHLTSCNTFSLKKIKFLVLDEADRLLEGHFDDQLKVIFDALPKQ 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAA--SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+Q LFSATMT + K++ K E+ S +TV L Q+Y P+ +D +LV
Sbjct: 176 KQMLLFSATMTDALSKVKDIVSKKAFIWESTEDSGVATVRQLDQRYVLCPSDVRDSFLVE 235
Query: 247 IL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ T S M+FT TC ++L++ML ++G + + + + Q RL AL++FK+
Sbjct: 236 VIRTFRTTNENGSIMIFTDTCKNCQVLSMMLSDVGFKNVALHAMIKQKDRLAALSQFKSN 295
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V++V+N+ +P K+YIHRVGRTARAG+ G+AI+L+ ++
Sbjct: 296 HIQILIATDVAARGLDIPTVELVVNHIVPNVPKEYIHRVGRTARAGKGGMAITLIAPNDI 355
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
+ +E+ IG KL E+ + E++ +L +++ AKR ++M + ++ NKR++
Sbjct: 356 KLLHAVEEAIGTKLTEYKVNDTEIIKILTQISVAKREAEMKLDETDFYEKKRINKRKKLI 415
Query: 414 -KGGDEDD 420
+G D D+
Sbjct: 416 LEGKDPDE 423
>gi|393910350|gb|EFO27145.2| Ddx49-A-prov protein [Loa loa]
Length = 509
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/413 (45%), Positives = 256/413 (61%), Gaps = 14/413 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL L ++ TP+ +Q IPH L G D++G A+TG+GKT AF LPIL
Sbjct: 44 TFSELGLSKWLCNQVRHLAMNTPTPVQVNCIPHILAGSDVLGCAKTGTGKTLAFGLPILH 103
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E+A + + A VL+PTRELAIQI +QF ALG+ I L+ ++VGG D + Q
Sbjct: 104 ---ELAIDPYGICAL---VLTPTRELAIQIGDQFAALGTPIGLKIGIVVGGKDRVAQGND 157
Query: 129 LGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPHIVVATPGRL DHL + G L++LVLDEADRLL+ + L ILN +
Sbjct: 158 LARRPHIVVATPGRLADHLESDSENTGKLFKKLRFLVLDEADRLLDGQYSIELKTILNFL 217
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT+T + +L + +K P E S+ +TVD L+Q+Y P KD YLV
Sbjct: 218 PKQRQTLLFSATITSALSQLHQVSVKKPYFFEDKSEIATVDKLEQKYVLCPCAVKDAYLV 277
Query: 246 YILTEVSA----SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
Y++ S ++F+ TC + LA+M LG + + +SQ +R +L KF++
Sbjct: 278 YVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGLGFQVGSLHSQISQQERTSSLTKFRS 337
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G ILICTDVASRGLDIP VD+VIN+++P N K YIHRVGR+ARAGR G A+ V QY+
Sbjct: 338 GRIKILICTDVASRGLDIPHVDLVINHNVPQNPKTYIHRVGRSARAGRFGCALLFVTQYD 397
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+ +IEK+IGKKL + +++V + +V KR +++ + D N RK
Sbjct: 398 IFLVQEIEKVIGKKLDKLIVNDKKVTQYVTQVLVTKREAEIKL-DQQNFGERK 449
>gi|312067818|ref|XP_003136922.1| Ddx49-A-prov protein [Loa loa]
Length = 478
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/413 (45%), Positives = 256/413 (61%), Gaps = 14/413 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL L ++ TP+ +Q IPH L G D++G A+TG+GKT AF LPIL
Sbjct: 44 TFSELGLSKWLCNQVRHLAMNTPTPVQVNCIPHILAGSDVLGCAKTGTGKTLAFGLPILH 103
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E+A + + A VL+PTRELAIQI +QF ALG+ I L+ ++VGG D + Q
Sbjct: 104 ---ELAIDPYGICAL---VLTPTRELAIQIGDQFAALGTPIGLKIGIVVGGKDRVAQGND 157
Query: 129 LGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPHIVVATPGRL DHL + G L++LVLDEADRLL+ + L ILN +
Sbjct: 158 LARRPHIVVATPGRLADHLESDSENTGKLFKKLRFLVLDEADRLLDGQYSIELKTILNFL 217
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT+T + +L + +K P E S+ +TVD L+Q+Y P KD YLV
Sbjct: 218 PKQRQTLLFSATITSALSQLHQVSVKKPYFFEDKSEIATVDKLEQKYVLCPCAVKDAYLV 277
Query: 246 YILTEVSA----SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
Y++ S ++F+ TC + LA+M LG + + +SQ +R +L KF++
Sbjct: 278 YVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGLGFQVGSLHSQISQQERTSSLTKFRS 337
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G ILICTDVASRGLDIP VD+VIN+++P N K YIHRVGR+ARAGR G A+ V QY+
Sbjct: 338 GRIKILICTDVASRGLDIPHVDLVINHNVPQNPKTYIHRVGRSARAGRFGCALLFVTQYD 397
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+ +IEK+IGKKL + +++V + +V KR +++ + D N RK
Sbjct: 398 IFLVQEIEKVIGKKLDKLIVNDKKVTQYVTQVLVTKREAEIKL-DQQNFGERK 449
>gi|380026593|ref|XP_003697032.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Apis
florea]
Length = 452
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/428 (43%), Positives = 266/428 (62%), Gaps = 22/428 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +L L LV+ C +G K P+ IQ IP L G D IG A+TGSGKT AFALPILQ
Sbjct: 2 TFADLNLSLWLVQQCTFMGLKYPTSIQQNCIPRILAGDDCIGCAKTGSGKTLAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA VL+PTRELA QI++QF A+G I L+ V+VGG+DM+ Q L
Sbjct: 62 KLSEDPY------GIFALVLTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVIQGLE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K PHIVVATPGRL DHL + FSL +K+LVLDEADRLL F+ L I +P+
Sbjct: 116 LSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVLDEADRLLEGYFDDQLKTIFEALPKQ 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAA--SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+Q LFSATMT + K++ E+ S +TV L Q Y P+ +D +LV
Sbjct: 176 KQMLLFSATMTDTLHKVKHIVSSKTFIWESKDESGIATVKELNQHYVLCPSDIRDSFLVE 235
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ A+ S M+FT TC ++L++ L ++G + + + + Q RL AL +FK+
Sbjct: 236 VIRTFRANNKNGSIMIFTDTCKHCQILSMTLNDVGFKNVALHSMVKQKDRLAALVQFKSN 295
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V++VIN+ IP K+YIHRVGRTARAG++G+AI+L+ +++
Sbjct: 296 HIKILIATDVAARGLDIPTVELVINHIIPNVPKEYIHRVGRTARAGKSGMAITLITPHDI 355
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
+ +E +IG KL E+ ++E++ +L +++ AKR ++M + ++ NKR++
Sbjct: 356 KLLHAVENIIGTKLTEYKVNDKEIITILTQISVAKREAEMKLDETNFYEKKIINKRKKLI 415
Query: 414 -KGGDEDD 420
+G D D+
Sbjct: 416 LEGKDPDE 423
>gi|322796322|gb|EFZ18887.1| hypothetical protein SINV_00745 [Solenopsis invicta]
Length = 420
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/409 (46%), Positives = 262/409 (64%), Gaps = 12/409 (2%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+EVK F L L L+ C+++G K P+ IQ IP L G+D IG A+TGSGKT AFAL
Sbjct: 3 EEVKDFLHLKLNSWLLAQCKSMGLKKPTPIQENCIPRILMGEDCIGCAKTGSGKTLAFAL 62
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ L E FA VL+PTRELA QI++QF A+G I+L+ V+VGG+DMM
Sbjct: 63 PILQKLCEDPY------GIFALVLTPTRELAFQIADQFAAIGKVINLKKCVIVGGMDMMI 116
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L L KRPHIVVATPGRL DHL + FSL +K+LVLDEADRLL F+K L +I V
Sbjct: 117 QGLELSKRPHIVVATPGRLADHLDSCNTFSLQKIKFLVLDEADRLLGGHFDKQLKKIFAV 176
Query: 185 IPRMRQTYLFSATMTKKVKKLQR-ACLKNPVKIEA-ASKYSTVDTLKQQYRFVPAKYKDC 242
+P+ +Q FSATMT + K+++ AC K E + +TV L Q+Y P D
Sbjct: 177 LPKQKQILFFSATMTDTLDKVKKMACNKVFTWQEKDDAGIATVKELDQRYVLCPKDVLDS 236
Query: 243 YLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
YLV ++ T M+FT TC +LL++ L ++G + + + Q +RL ALNK
Sbjct: 237 YLVEVIRTFRTTNKNGCIMIFTDTCKNCQLLSMTLNDVGFTNVALHAMLKQKERLVALNK 296
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK+ ILI T+VA+RGLDIP+V +V+N+ IP K+YIHRVGRTARAG G+AISL+
Sbjct: 297 FKSNHIQILIATNVAARGLDIPAVQLVVNHVIPNVPKEYIHRVGRTARAGENGMAISLIT 356
Query: 359 QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
++++ IE IG KL E+ +++E++ +L +++ AKR +++ + ++
Sbjct: 357 PHDIKLLHAIEDAIGTKLTEYKVDDKEIVTILTQISVAKREAEIKLDET 405
>gi|115473551|ref|NP_001060374.1| Os07g0633500 [Oryza sativa Japonica Group]
gi|75329662|sp|Q8L4E9.1|RH36_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|22093824|dbj|BAC07111.1| DEAD box protein-like [Oryza sativa Japonica Group]
gi|22296386|dbj|BAC10155.1| DEAD box protein-like [Oryza sativa Japonica Group]
gi|113611910|dbj|BAF22288.1| Os07g0633500 [Oryza sativa Japonica Group]
gi|125601204|gb|EAZ40780.1| hypothetical protein OsJ_25257 [Oryza sativa Japonica Group]
Length = 501
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/408 (44%), Positives = 259/408 (63%), Gaps = 12/408 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL LV+ C+++G + P+ +Q IP ALEG+D++G+A+TGSGKT AFALPIL
Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILH 137
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E+ V A L+PTRELA Q++EQF ALG+ + LRC +GG D + Q
Sbjct: 138 RL---GEDPYGVAAL---ALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKG 191
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +RPH+VVATPGR+ + + + K+LVLDEADR+L+ +FE+ L I +P
Sbjct: 192 LARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLP 251
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT+LFSAT++ ++ L N EA + TVDTLKQ Y VP K+ YL Y
Sbjct: 252 KKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFY 311
Query: 247 ILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+L++++ S +VF TC + L +L LG A+ + H QS+RL AL+ FK+ +
Sbjct: 312 LLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSK 371
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV-NQYEL 362
+L+ TDVASRGLDI +VD+VINYD+P +DYIHRVGRTARA R G++IS + Q ++
Sbjct: 372 VPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDI 431
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
+IE ++GK+L + E +V +V +A+R++ M + D G++
Sbjct: 432 RLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARRLANMKMADEGHE 479
>gi|417401748|gb|JAA47742.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 483
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 269/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ + +LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIHFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQNFQDEHEDWSIIIFTNTCKTCQVLCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ ++ + NKR++
Sbjct: 358 HLVHAIEEQINKKLEEFVVEEAEVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|125559280|gb|EAZ04816.1| hypothetical protein OsI_26993 [Oryza sativa Indica Group]
Length = 501
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/408 (44%), Positives = 259/408 (63%), Gaps = 12/408 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL LV+ C+++G + P+ +Q IP ALEG+D++G+A+TGSGKT AFALPIL
Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILH 137
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E+ V A L+PTRELA Q++EQF ALG+ + LRC +GG D + Q
Sbjct: 138 RL---GEDPYGVAAL---ALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKG 191
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +RPH+VVATPGR+ + + + K+LVLDEADR+L+ +FE+ L I +P
Sbjct: 192 LARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLP 251
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT+LFSAT++ ++ L N EA + TVDTLKQ Y VP K+ YL Y
Sbjct: 252 KKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFY 311
Query: 247 ILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+L++++ S +VF TC + L +L LG A+ + H QS+RL AL+ FK+ +
Sbjct: 312 LLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSK 371
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV-NQYEL 362
+L+ TDVASRGLDI +VD+VINYD+P +DYIHRVGRTARA R G++IS + Q ++
Sbjct: 372 VPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDI 431
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
+IE ++GK+L + E +V +V +A+R++ M + D G++
Sbjct: 432 RLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARRLANMKMADEGHE 479
>gi|350415766|ref|XP_003490744.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
impatiens]
Length = 452
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/430 (43%), Positives = 263/430 (61%), Gaps = 25/430 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L LV+ C +G K P+ IQ IP L G D IG A+TGSGKT AFALPILQ
Sbjct: 2 SFAALNLSSWLVQQCNFMGLKCPTPIQKNCIPKILAGDDCIGCAKTGSGKTLAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA VL+PTRELA QI++QF A+G I L+ V+VGG+DM+ Q L
Sbjct: 62 KLSEDPY------GIFALVLTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVVQGLE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K PHIVVATPGRL DHL + FSL +K+LVLDEADRLL F+ L I +P+
Sbjct: 116 LSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVLDEADRLLEGHFDDQLKTIFEALPKR 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY--STVDTLKQQYRFVPAKYKDCYLVY 246
+Q LFSATMT + K++ E+ ++ +TV L Q+Y P+ +D +LV
Sbjct: 176 KQMLLFSATMTDTLDKVKHIASSKAFIWESKDEFGVATVKELDQRYVLCPSDVRDSFLVE 235
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
+ AS S M+FT TC ++L++ L ++G + + + Q RL AL +FK+
Sbjct: 236 AIRTFRASNKDGSIMIFTDTCKHCQVLSMTLNDVGFNNVALHAMIKQKDRLAALTQFKSN 295
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V++VIN+ IP +K+YIHRVGRTARAG+ G+AI+L+ +++
Sbjct: 296 HAKILIATDVAARGLDIPTVELVINHIIPNVTKEYIHRVGRTARAGKNGMAITLITPHDI 355
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDI 422
+ IE IG KL E+ ++E++ +L +++ AKR ++M + DE D
Sbjct: 356 KLLHAIENAIGTKLTEYKVNDKEIVTILTQISVAKREAEMKL------------DEMDFY 403
Query: 423 GRQFGINKKK 432
G++ INK+K
Sbjct: 404 GKKM-INKRK 412
>gi|328789449|ref|XP_003251275.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Apis
mellifera]
Length = 452
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/428 (43%), Positives = 264/428 (61%), Gaps = 22/428 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL L LV+ C +G K P+ IQ IP L G D IG A+TGSGKT AFALPILQ
Sbjct: 2 TFAELNLSSWLVQQCTFMGLKYPTPIQQNCIPRILAGTDCIGCAKTGSGKTLAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA VL+PTRELA QI++QF A+G I L+ ++VGG+DM+ Q L
Sbjct: 62 KLSEDPY------GIFALVLTPTRELAFQIADQFSAIGKSIGLKKCIIVGGMDMVVQGLE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K PHIVVATPGRL DHL + FSL +K+LVLDEADRLL F+ L I +P+
Sbjct: 116 LSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVLDEADRLLEGYFDDQLKTIFEALPKQ 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAA--SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+Q LFSATMT + K++ E+ S +TV L Q Y P +D +LV
Sbjct: 176 KQILLFSATMTDTLHKVKHIVSNKAFIWESKDESGIATVKELNQHYVLCPRDIRDSFLVE 235
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ A+ S ++FT TC ++L++ L ++G + + + + Q RL AL +FK+
Sbjct: 236 VIRTFRANNKNGSIIIFTDTCKHCQILSMTLNDVGFKNVALHSMVKQKDRLAALVQFKSN 295
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V+++IN+ IP K+YIHRVGRTARAG++G+AI+L+ +++
Sbjct: 296 HIKILIATDVAARGLDIPTVELIINHIIPNVPKEYIHRVGRTARAGKSGMAITLITPHDI 355
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
+ IE IG KL E+ ++E++ +L +++ AKR ++M + ++ NKR++
Sbjct: 356 KLLHAIENTIGTKLTEYKINDKEIITILTQISVAKREAEMKLDETNFYEKKIINKRKKLI 415
Query: 414 -KGGDEDD 420
+G D D+
Sbjct: 416 LEGKDPDE 423
>gi|332374708|gb|AEE62495.1| unknown [Dendroctonus ponderosae]
Length = 470
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 260/410 (63%), Gaps = 14/410 (3%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
MAEE + F +L L++ +V+ C ++G K P+ IQA IP LEGK IG A+TGSGKT
Sbjct: 1 MAEE--LSNFSQLKLQNWIVKQCHSIGVKRPTPIQANCIPKILEGKTCIGAAKTGSGKTL 58
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPI+Q L E +A VL+P RELA QI++QF LG +++R V+VGG+
Sbjct: 59 AFALPIVQKLYEDPY------GIYALVLTPIRELAFQIADQFAILGKPMNMRTCVVVGGM 112
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DM++Q L K PH+VVATPGRL+DHL F+L +K+LV+DEADRLL F+ +
Sbjct: 113 DMVEQGRQLSKVPHVVVATPGRLVDHLEGCDTFTLSRIKFLVIDEADRLLGGLFDDQIKR 172
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE--AASKYSTVDTLKQQYRFVPAK 238
I +V+P+ RQ+ FSATMT ++ L++ ++ E S+ TV L QQY PA
Sbjct: 173 IFSVLPKTRQSIYFSATMTDTLQTLKKLVAEDAFFYEDIGPSEAVTVAGLTQQYMLCPAY 232
Query: 239 YKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
KD YLV +L +E + M+FT TC +LL++ L +G + + + Q++RL
Sbjct: 233 VKDAYLVELLRIFISENDQGTVMIFTNTCKNCQLLSITLNEVGMDNVALHAMIPQAQRLA 292
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
ALN+FK+ ILI TDVASRGLDIP+V ++IN+++P K+Y+HRVGRTARAGR G A+
Sbjct: 293 ALNRFKSNRVKILIATDVASRGLDIPNVQLIINHNVPRIPKEYVHRVGRTARAGRQGRAV 352
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 404
+LV Y+L+ L IE+LI KL E ++EV + V+ K + M +
Sbjct: 353 TLVTPYDLKLLLAIEELIKTKLTECKVNDKEVAEIFTEVSVTKSEAYMKL 402
>gi|198427069|ref|XP_002129152.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
[Ciona intestinalis]
Length = 452
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 180/413 (43%), Positives = 267/413 (64%), Gaps = 17/413 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
F +LGL + +++ N+G+ P+ IQ IP L+GKD G ++TGSGKT AFALP+LQ
Sbjct: 6 NFADLGLNEWIIQHLGNLGFNKPTPIQYNCIPPILQGKDCFGCSKTGSGKTAAFALPVLQ 65
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E F VL+PTRELA QISEQF +G I++R +V+VGG+D++QQ
Sbjct: 66 KLSEDPY------GIFCLVLTPTRELAYQISEQFTLIGKPINIRTSVIVGGMDIIQQAYE 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVI 185
L K+PHIV+ATPGRL D L + + +K+LVLDEADRLL+ DF L+ I + +
Sbjct: 120 LQKKPHIVIATPGRLADLLRSNEN----NVKFLVLDEADRLLDKLDGDFTNDLNLIFSSL 175
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT+T + +++ K+P ++ +K STVD L Q+Y +P +D YLV
Sbjct: 176 PKERQTLLFSATLTDTLNEVKELSTKSPFFWQSDNKVSTVDNLDQRYILLPEHIRDGYLV 235
Query: 246 YI----LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YI L + S M+FT+TC ++L ++L+ G + + + M Q +RL AL++FK+
Sbjct: 236 YICKDLLEKQPTRSIMIFTKTCKNCQVLGMLLQKAGFQCVVLHSLMKQRERLTALSRFKS 295
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+L+ TDVA+RGLDIP V +VIN+++P +K+YIHRVGRTARAGR+G++I+LV Q++
Sbjct: 296 SNTRLLVATDVAARGLDIPVVQVVINHNVPGLAKNYIHRVGRTARAGRSGISITLVTQFD 355
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
+ IE+ I KL E+ +E EVL +L +V KR ++ +++ ++K
Sbjct: 356 IHRVQSIEEHINTKLKEYEVDEREVLKILTKVNVMKRETEWVLEEQKFGEKKK 408
>gi|357121829|ref|XP_003562620.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like
[Brachypodium distachyon]
Length = 500
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 266/405 (65%), Gaps = 12/405 (2%)
Query: 12 ELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALL 71
+LGL + LV+ C ++G + P+ +Q IP AL G++++G+A+TGSGKT AFALPIL L
Sbjct: 80 DLGLSEWLVDVCSSLGMRRPTDVQRRCIPRALAGENVLGIAETGSGKTAAFALPILHRL- 138
Query: 72 EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGK 131
E+ V A V++PTRELA Q++EQF ALGS + LRC +GG D + Q L +
Sbjct: 139 --GEDPFGVAAL---VVTPTRELAAQLAEQFRALGSPLGLRCLAAIGGFDSLAQAKGLSR 193
Query: 132 RPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPH+VVATPGR+ + N + K+LVLDEADR+++ +FE+ L I + +P+ R
Sbjct: 194 RPHVVVATPGRIATLINNDPDLAKVFARTKFLVLDEADRVIDSNFEEDLKVIFDCLPKKR 253
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT+LFSATM++ ++ L N EA + TV+TLKQ+Y +P K+ +L+Y+L+
Sbjct: 254 QTFLFSATMSENLRSLLELSGDNSYFFEAYEGFKTVETLKQKYIHIPPDGKELHLMYLLS 313
Query: 250 ---EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
E + S +VF TC + L +L LG+ A+ + H +QS+RL AL++FK+G+ +
Sbjct: 314 KMKEDNIRSAIVFVSTCRTCQYLDFLLEELGRSAVSLHSHKAQSRRLSALHRFKSGQVPV 373
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN-QYELEWY 365
LI TDVASRGLDI +VD+VINYDIP +DYIHRVGRTARA R G++IS ++ Q ++
Sbjct: 374 LIATDVASRGLDIQTVDLVINYDIPRFPRDYIHRVGRTARATRGGLSISFMSLQRDICLL 433
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
++E +GK+ + +++EV + +V +A+R++ M + D G++
Sbjct: 434 HEVEDDVGKRFDAYECDDKEVTKDITKVFKARRLANMRMADEGHE 478
>gi|401839240|gb|EJT42545.1| RRP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 404
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 172/327 (52%), Positives = 232/327 (70%), Gaps = 7/327 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E + ++F EL L EL++AC+N+ + P+ IQ+++IP AL+G D+IGLAQTGSGKT AF
Sbjct: 78 EGESFESFNELNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAF 137
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 138 AIPILNRLWHDQE------PYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNM 191
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 192 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 251
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 252 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQALMVVPGGLKN 311
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 312 TYLIYLLNESIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 371
Query: 302 GECNILICTDVASRGLDIPSVDMVINY 328
G+ +IL+ TDVA+RGLDIPSVD+V+NY
Sbjct: 372 GKRSILVATDVAARGLDIPSVDIVVNY 398
>gi|427783023|gb|JAA56963.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 467
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 263/419 (62%), Gaps = 13/419 (3%)
Query: 1 MAEEKEVKT--FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGK 58
M+ K KT F +L L +++ E +G PS IQ IP L GKD IG A+TGSGK
Sbjct: 1 MSTVKHSKTVNFADLKLNKWIIDQLETLGISKPSPIQENCIPAILSGKDCIGCAKTGSGK 60
Query: 59 TGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
T AFALPILQ L E FA +L+PTRELA QI +QF+ +G + L+ V+VG
Sbjct: 61 TLAFALPILQKLFEDPY------GIFALILTPTRELAFQICDQFKVVGKAVGLKECVIVG 114
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
G+DM+ Q L + PH+VVATPGRL DHL + F+L +++LVLDEADRLL F + L
Sbjct: 115 GMDMVTQGQVLAESPHVVVATPGRLADHLESCNTFTLKRIRFLVLDEADRLLEGHFNEQL 174
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
I +P+ RQT LFSAT+T +++L+ + +P A + TV+ L Q+Y +P
Sbjct: 175 KTIFAALPK-RQTLLFSATITATLEELRNVAMTDPFFYTAPADVVTVEELDQRYVLMPVS 233
Query: 239 YKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
++ YLV+IL S S ++FT TC ++L++ L++LG P+ M Q +RL
Sbjct: 234 VREAYLVHILKRFLDSMPKGSVIIFTGTCKGCQVLSIALKSLGFLNAPLHSQMPQRERLA 293
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
+LN FK+ +L+ TDVASRGLDIPSV++V+N+++P+ KDY+HRVGRTARAGR G AI
Sbjct: 294 SLNLFKSNTTRVLVATDVASRGLDIPSVELVLNHNVPSAPKDYVHRVGRTARAGRGGKAI 353
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
+LV Q+++ IE LI KL P +E EVL +L +V+ A R +++ + + + R+
Sbjct: 354 TLVTQHDVHLVEAIEALIKTKLVLQPTKESEVLKILTQVSVALREAEIRLDEQDFEERK 412
>gi|384487839|gb|EIE80019.1| hypothetical protein RO3G_04724 [Rhizopus delemar RA 99-880]
Length = 425
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 184/398 (46%), Positives = 259/398 (65%), Gaps = 12/398 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+++G+ + + E +++ K P++IQ I ++GKD+IG A+TGSGKT AFA+PILQ
Sbjct: 32 FEDVGVEEWMCETLKSMAIKEPTEIQRACIQPIMDGKDVIGGAKTGSGKTAAFAIPILQK 91
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + FA VL+PTRELA QI+EQF LG GI ++ V+VGG+DMM Q L L
Sbjct: 92 L------SQDPYGVFALVLTPTRELAYQIAEQFRVLGKGIGVKECVVVGGMDMMTQALEL 145
Query: 130 GKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
KRPHI++ATPGRL DH+ ++ G +L K+LV+DEADR+L+ F L+ IL ++P+
Sbjct: 146 AKRPHIIIATPGRLRDHIQSSSGAVNLSRCKFLVMDEADRMLSSTFVPELETILPLLPKN 205
Query: 189 RQTYLFSATMTKKVKKLQRA---CLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
RQT LF+ATMT+ + L+ A K P STV+TL Q Y FVP++ K YL
Sbjct: 206 RQTLLFTATMTESILALKDAEEDPAKRPFVHVCDMSISTVNTLDQFYVFVPSQVKVVYLA 265
Query: 246 YIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
++L ++ S ++F C L+ +ML+ LG R + MSQ +RL +L KF+A
Sbjct: 266 HLLRTDDLKERSVIIFCGRCSTAELITVMLKELGIRCTALHSEMSQQQRLDSLGKFRAEV 325
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
ILI TDV SRGLDIPSV+ V+N+DIP + DYIHRVGRTARAGR G AIS+V + +++
Sbjct: 326 VKILISTDVGSRGLDIPSVECVLNFDIPRDPTDYIHRVGRTARAGRGGKAISIVAEKDIQ 385
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 401
IE+ K++ ++ +E EVL +L VT AKRI++
Sbjct: 386 LIQNIEERTNKQMEKYEVDENEVLDILSDVTAAKRIAK 423
>gi|340728741|ref|XP_003402675.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
terrestris]
Length = 452
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/430 (43%), Positives = 262/430 (60%), Gaps = 25/430 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L LV+ C +G K P+ IQ IP L G D IG A+TGSGKT AFALPILQ
Sbjct: 2 SFAALNLSSWLVQQCNFMGLKCPTPIQKNCIPKILAGDDCIGCAKTGSGKTLAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA +L+PTRELA QI++QF A+G I L+ V+VGG+DM+ Q L
Sbjct: 62 KLSEDPY------GIFALILTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVVQGLE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K PHIVVATPGRL DHL + FSL +K+LVLDEADRLL F+ L I +P+
Sbjct: 116 LSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVLDEADRLLEGHFDDQLKTIFEALPKR 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAA--SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+Q LFSATMT + K++ E+ S +TV L Q+Y P+ +D +LV
Sbjct: 176 KQMLLFSATMTDTLDKVKHIASSKAFIWESKDESGVATVKELDQRYILCPSDVRDSFLVE 235
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
+ S S M+FT TC ++L++ L ++G + + + + Q RL AL +FK+
Sbjct: 236 AIRTFRGSNKDGSIMIFTDTCKHCQVLSMTLNDVGFKNVALHAMIKQKDRLAALTQFKSN 295
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+RGLDIP+V++VIN+ IP +K+YIHRVGRTARAG+ G+AI+L+ +++
Sbjct: 296 HAKILIATDVAARGLDIPTVELVINHIIPNVTKEYIHRVGRTARAGKNGMAITLITPHDI 355
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDI 422
+ IE IG KL E+ ++E++ +L +++ AKR ++M + DE D
Sbjct: 356 KLLHAIENAIGTKLTEYKVNDKEIVTILTQISVAKREAEMKL------------DEMDFY 403
Query: 423 GRQFGINKKK 432
G++ INK+K
Sbjct: 404 GKKM-INKRK 412
>gi|307110624|gb|EFN58860.1| hypothetical protein CHLNCDRAFT_48551 [Chlorella variabilis]
Length = 407
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 183/383 (47%), Positives = 253/383 (66%), Gaps = 11/383 (2%)
Query: 29 KTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVL 88
+ P+++Q IP L G+++IG+A TGSGKT AFALPILQ L A+N V FA VL
Sbjct: 2 REPTQVQRGTIPAVLAGRNVIGVAHTGSGKTAAFALPILQKL---AKNPFGV---FALVL 55
Query: 89 SPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRL--MDH 146
+PTRELA Q+++QF ALG+G+SL+ V+VGG+DM Q L +RPH+V+ATPGRL +
Sbjct: 56 TPTRELAFQLADQFRALGTGMSLKDCVVVGGLDMTAQAKELARRPHVVIATPGRLRGLLQ 115
Query: 147 LTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQ 206
L G ++LVLDEADRLL FE L +L +P RQT LFSATMT+ + +LQ
Sbjct: 116 LDGELARVFGRARFLVLDEADRLLEPSFESELAVVLGALPERRQTLLFSATMTQTLVELQ 175
Query: 207 RACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL---TEVSASSTMVFTRTC 263
+ L++ +A T L+Q+Y F+PAK K+ YLV++L E+ S ++F TC
Sbjct: 176 KQLLRDAYHFQAYEGLQTAAKLRQEYLFLPAKVKEVYLVHLLGQLEELQCRSAIIFAGTC 235
Query: 264 DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVD 323
LL+L+L LG A + H Q RL AL++FK+G IL+ TDVASRGLDIPSVD
Sbjct: 236 KGCHLLSLLLEELGIAAAALHSHKPQRARLEALHRFKSGSVPILLATDVASRGLDIPSVD 295
Query: 324 MVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 383
+V+NYD+P ++DY+HRVGRTARAGR G ++S V QY+++ QIE L+G++L +F EE
Sbjct: 296 LVVNYDLPQMARDYVHRVGRTARAGRRGWSLSFVTQYDIDLVQQIEVLVGQQLGKFELEE 355
Query: 384 EEVLLLLERVTEAKRISQMTIKD 406
E L + +V AKR + + + +
Sbjct: 356 AEALKGITKVYSAKRAAALRVAE 378
>gi|156549811|ref|XP_001606554.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Nasonia
vitripennis]
Length = 456
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/431 (43%), Positives = 264/431 (61%), Gaps = 24/431 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L + +++ + +G K P+ IQ IP L GKD IG A+TGSGKT AFALPILQ
Sbjct: 4 FTDLNISSWIIDQLKLIGVKKPTPIQQNCIPAILSGKDCIGCAKTGSGKTLAFALPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E FA VL+PTRELA QI +QF A+G I+L+ +VGG+DM+ Q L
Sbjct: 64 LSEDPY------GIFALVLTPTRELAFQIGDQFAAIGKTINLKKCTIVGGMDMVVQGQEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ PHIVVATPGRL DHL + FSL +K+LVLDEADRLL F++ L I +P+ R
Sbjct: 118 ARHPHIVVATPGRLADHLESCNTFSLARIKFLVLDEADRLLGGHFDEQLSVIFKALPKNR 177
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAA--SKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
Q+ LFSAT+T + K+++ K E+ S +TV L Q+Y P +D +LV +
Sbjct: 178 QSLLFSATITDALDKVKQVSTKEWFIWESTDDSGVATVKELDQRYVLCPKDVRDAFLVEV 237
Query: 248 LTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+ A S M+FT TC +LL++ L +G + + + Q +RL AL+KFK+
Sbjct: 238 IRTFRADNENGSIMIFTDTCKNCQLLSMTLNEVGFDNVALHAMIKQKERLSALSKFKSNH 297
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
ILI TDVA+RGLDIP V +VIN++IP K+YIHRVGRTARAGR G+A+SLV Y++
Sbjct: 298 TKILIATDVAARGLDIPIVALVINHNIPNIPKEYIHRVGRTARAGRGGMAVSLVTPYDIN 357
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR--- 413
IE+ IG KL EF E++E++ + +++ KR +++ + ++ NKR++
Sbjct: 358 LLHAIEETIGTKLTEFKVEDKEIVNIFTQISVTKREAEIKLDETDFYEKKMINKRKKLIL 417
Query: 414 --KGGDEDDDI 422
K DE D+I
Sbjct: 418 EGKDPDEVDEI 428
>gi|354473856|ref|XP_003499148.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Cricetulus
griseus]
gi|344241323|gb|EGV97426.1| putative ATP-dependent RNA helicase DDX49 [Cricetulus griseus]
Length = 480
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP L+G+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILQGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ ++ +++LV+DEADRLL DF L+ IL IP
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTLNMKKIRFLVMDEADRLLEQGCTDFTADLETILAAIP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 VRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 IL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ ++ S ++FT TC ++L +MLR L + + M Q +R AL KFK+
Sbjct: 238 LVQTFQNQLEDCSIIIFTNTCKTCQVLCMMLRKLSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 VYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
+E+ I K+L E EE EVL +L +V +R ++ ++ S NKR++
Sbjct: 358 HLLHAVEEQIKKQLEELVVEEAEVLNILTQVNVVRRECEIKLEASHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K ++
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQQNKR 442
>gi|242005222|ref|XP_002423470.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212506558|gb|EEB10732.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 422
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/415 (44%), Positives = 252/415 (60%), Gaps = 17/415 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++L L +V C++ G P+ IQA IP LEG D IG A+TGSGKT AFALPILQ
Sbjct: 5 FEDLNLNKWIVRQCDSFGLTKPTPIQAHCIPKILEGNDCIGCAKTGSGKTLAFALPILQK 64
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E FA VL+PTRELA QI EQF A G I+L+ V+ GG+DM+ Q L
Sbjct: 65 LSE------EPFGIFALVLTPTRELAFQIGEQFLAYGKVINLKLCVISGGMDMVTQGQEL 118
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPHIVV+TPGRL DHL + FSL +++LVLDEADRLL+ F+ + I +P +
Sbjct: 119 SKRPHIVVSTPGRLADHLDSCNTFSLKKIRFLVLDEADRLLSGQFDDQISTIFKSLPLKK 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSAT+ +K+ + KN S +TVD L+Q Y P KD YLV ++
Sbjct: 179 QILLFSATINDTLKQAEELLSKNVFSFIDKSDVATVDNLQQFYVLCPDHVKDAYLVEVIQ 238
Query: 250 ----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ ++FT TC +LL++ L +G + I M Q +RL AL++FK+
Sbjct: 239 LYRKNNENGNIIIFTDTCRNCQLLSMTLNEVGFENVAIHSMMKQKERLAALSRFKSNIVK 298
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
LI TD+ASRGLDIP+V++VIN+ IP KDYIHRVGRTARAGR G+++SLV +++
Sbjct: 299 TLIATDIASRGLDIPTVELVINHSIPNVPKDYIHRVGRTARAGRAGMSVSLVTPVDIKLI 358
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR 413
IE +I KL E+ ++EV+ +L +V KR +++ + ++ NKR++
Sbjct: 359 HAIESIINTKLKEYSINDKEVIKILTQVKVTKREAEIKLDETDFYEKKMINKRKK 413
>gi|270005640|gb|EFA02088.1| hypothetical protein TcasGA2_TC007723 [Tribolium castaneum]
Length = 447
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/427 (42%), Positives = 262/427 (61%), Gaps = 19/427 (4%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +L L ++ C +G ++P+ IQ IP L G+D IG A+TGSGKT AFALPIL
Sbjct: 4 KSFDKLQLNPWIIRQCATIGVRSPTPIQTNCIPPILAGRDCIGAAKTGSGKTLAFALPIL 63
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q L E FA +L+PTRELA QI++QF +G ++LR V+VGG+DM+ Q
Sbjct: 64 QKLCEDPY------GIFALILTPTRELAFQIADQFAVIGKVMNLRHCVIVGGMDMVVQGK 117
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++PHIVVATPGRL DHL + F+ L++LVLDEADRLL F++ + I +P+
Sbjct: 118 DLARKPHIVVATPGRLADHLESCNTFNFNKLRFLVLDEADRLLGGHFDEQIKTIFQALPK 177
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQ FSAT+T ++KL+ K+ EA ++ +TV+ L+Q Y P KD YLV
Sbjct: 178 ERQNLFFSATITDTLEKLKDVTGKDVFFYEAPAEVATVEQLEQNYVLCPKDVKDAYLVET 237
Query: 248 LTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+ A+ + ++FT TC ++L++ L +G + + M Q +RL AL KFK+
Sbjct: 238 IRTYRATNDGNILIFTNTCKNCQVLSMTLNEVGFENVALHAMMKQQQRLAALAKFKSNTI 297
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
IL+ TDVASRGLDIP+V +VIN++IP K+YIHRVGRTARAGR G AISLV Y+++
Sbjct: 298 KILLATDVASRGLDIPTVQLVINHNIPKIPKEYIHRVGRTARAGRNGKAISLVTPYDIKL 357
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR---K 414
IE+ I KL EF ++ EV + +++ K + + + + NKR++ +
Sbjct: 358 LQAIEQHINTKLTEFKLDDSEVGKIFTQISVTKSEAYIKLDEQDFYEKKMINKRKKWMME 417
Query: 415 GGDEDDD 421
G D D++
Sbjct: 418 GLDPDEE 424
>gi|307209820|gb|EFN86616.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 286
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 167/286 (58%), Positives = 217/286 (75%), Gaps = 11/286 (3%)
Query: 163 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 222
+ EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY
Sbjct: 1 MGEADRILNMDFEIEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKY 60
Query: 223 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 282
TV+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P
Sbjct: 61 QTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVP 120
Query: 283 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 342
+ G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVG
Sbjct: 121 LHGQMSQNKRIAALTKFKARNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVG 180
Query: 343 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 402
RTARAGR+G +I+ V QY++E Y +IE+LI K+LP +P EE EV+LL ERVTEA+RI +M
Sbjct: 181 RTARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLWPTEEGEVMLLQERVTEAQRIVKM 240
Query: 403 TIKD-----SGNKRRRKGGDEDDDIGRQFGI------NKKKLSKRK 437
+KD KR+++ GD +DD + G+ N KK+ KR+
Sbjct: 241 EVKDIEENKKLGKRKKRAGDNEDDTEQSIGVRKRIKGNGKKMGKRR 286
>gi|295670994|ref|XP_002796044.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284177|gb|EEH39743.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 319
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 228/296 (77%), Gaps = 1/296 (0%)
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 1 MVPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKI 60
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSATM+ KV+ LQRA L NP+++ ++SKY TV L Q + F+P KYK
Sbjct: 61 LKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVSALLQTFLFIPHKYK 120
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVY+L E + S ++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL+KF+
Sbjct: 121 DIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSSRLGALSKFR 180
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGRTARAG++G A S V QY
Sbjct: 181 SRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRTARAGKSGHAFSFVTQY 240
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+LE +L+IE + KKL E+ E+EEV++L +RV+EA+R + +K+ R KG
Sbjct: 241 DLEVWLRIENALDKKLEEYKVEKEEVMVLSDRVSEAQRHAITEMKNLHENRGSKGA 296
>gi|147808007|emb|CAN66431.1| hypothetical protein VITISV_041393 [Vitis vinifera]
Length = 199
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/203 (81%), Positives = 183/203 (90%), Gaps = 7/203 (3%)
Query: 1 MAEE-KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
MAE+ KEVK+FK+LG+ ++LVEACEN+GWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT
Sbjct: 1 MAEDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
GAFALPILQALL+ T FACVLSPTRELAIQI+EQFEALGSGI L+CAVLVGG
Sbjct: 61 GAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGG 114
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
VD QQ +AL KRPHIVV TPGRLMDHL+NTKGFSL T+KYLVLDEADRLLNDDFEK++D
Sbjct: 115 VDHTQQAIALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAID 174
Query: 180 EILNVIPRMRQTYLFSATMTKKV 202
EIL+VIPR R+TYLFSATMTKKV
Sbjct: 175 EILSVIPRERKTYLFSATMTKKV 197
>gi|449533536|ref|XP_004173730.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
[Cucumis sativus]
Length = 206
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/202 (81%), Positives = 181/202 (89%), Gaps = 6/202 (2%)
Query: 46 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 105
KDLIGLAQTGSGKTGAFALPILQALLE + AFFACVLSPTRELAIQI+EQFEAL
Sbjct: 1 KDLIGLAQTGSGKTGAFALPILQALLEAPQ------AFFACVLSPTRELAIQIAEQFEAL 54
Query: 106 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 165
GSGI ++CAVLVGGVDM+QQ + L KRPH+VV TPGRL+DHLTNTKGFSL TLKYLVLDE
Sbjct: 55 GSGIGIKCAVLVGGVDMVQQAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDE 114
Query: 166 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 225
ADRLLN+DFEKS+DEILN IPR R+TYLFSATMTKKV+KLQRACL+NPVKIEAA+KYSTV
Sbjct: 115 ADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTV 174
Query: 226 DTLKQQYRFVPAKYKDCYLVYI 247
DTLKQQY F+PAKYK L ++
Sbjct: 175 DTLKQQYCFIPAKYKVSILFFL 196
>gi|170090862|ref|XP_001876653.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648146|gb|EDR12389.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/415 (44%), Positives = 256/415 (61%), Gaps = 23/415 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LG+ D L A ++ KTP+++QA IP L G D IG A+TGSGKT AFALPILQ
Sbjct: 1 SFASLGISDSLQSALTSMSIKTPTEVQAACIPPLLAGTDCIGNAKTGSGKTIAFALPILQ 60
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL +A VL+PTRELA QISEQF LG+ ++LR AV+VGG+DMM Q L
Sbjct: 61 RLLADPY------GIYALVLTPTRELAFQISEQFVVLGASLNLRTAVIVGGMDMMAQALE 114
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
LG RPHIV+ATPGRL+DHL ++ G + L +++LVLDEADRLL F L + NV+P+
Sbjct: 115 LGNRPHIVIATPGRLVDHLRSSSGEWDLSRVRFLVLDEADRLLTRTFSPELSHLFNVLPQ 174
Query: 188 MRQTYLFSATMTKKVKKLQRACLK--------NPVKIEAASKYSTVDTLKQQYRFVPAKY 239
RQT LF+AT+T ++ L A + + + + TV TLKQ Y VP+
Sbjct: 175 DRQTCLFTATLTPSIESLADATARPGKQKPFVHRMNERQVRRIETVSTLKQHYILVPSHV 234
Query: 240 KDCYLVYILTEV--------SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
++ YL Y+L T++F L L+L++L R+ + ++Q +
Sbjct: 235 RETYLYYLLRNPPDDDDELEQPPPTIIFCARPRTAAYLTLVLKSLSIRSTALHSRLTQRE 294
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
RL +L+ F+A +L+ TDV SRGLDI V MVIN+D+P +++Y HRVGRTARAGR G
Sbjct: 295 RLSSLSLFRASVVPVLVSTDVGSRGLDIEDVAMVINWDMPEEAEEYTHRVGRTARAGRGG 354
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
VAIS V + + + ++IEK I KL E E++VL L V+ AKR+++M++ D
Sbjct: 355 VAISFVTERDEDRVVKIEKRIKTKLEEMILSEDKVLEKLNAVSTAKRLAKMSLHD 409
>gi|307195490|gb|EFN77376.1| Probable ATP-dependent RNA helicase DDX49 [Harpegnathos saltator]
Length = 444
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 183/399 (45%), Positives = 252/399 (63%), Gaps = 21/399 (5%)
Query: 29 KTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVL 88
K P+ IQ IP L G+D IG A+TGSGKT AFALPILQ L E FA VL
Sbjct: 2 KQPTAIQQNCIPRILGGEDCIGCAKTGSGKTLAFALPILQKLCE------DPYGIFALVL 55
Query: 89 SPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLT 148
+PTRELA QI++QF A+G I+L+ V+VGG+DMM Q L L KRPHIVVATPGRL DHL
Sbjct: 56 TPTRELAFQIADQFAAIGKAINLKKCVIVGGMDMMVQGLELSKRPHIVVATPGRLADHLD 115
Query: 149 NTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRA 208
+ FSL +K+LVLDEADRLL F+K L I +P +Q LFSATMT + + ++
Sbjct: 116 SCNTFSLKRIKFLVLDEADRLLGGHFDKQLKTIFATLPEQKQVLLFSATMTNDLDNV-KS 174
Query: 209 CLKNPVKI---EAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTR 261
N V I + + +TV L Q+Y P D YLV ++ A+ S MVFT
Sbjct: 175 VASNKVFIWEEKDDAGIATVKELDQRYVLCPKDVLDSYLVEVIRTFCATNKNGSIMVFTD 234
Query: 262 TCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPS 321
TC +LL++ L ++G + + + Q +RL ALNKFK+ ILI TDVA+RGLDI
Sbjct: 235 TCKNCQLLSMALNDVGFTNVALHAMIKQKERLAALNKFKSNHVQILIATDVAARGLDIHE 294
Query: 322 VDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 381
V++V+N+ IP K+YIHRVGRTARAGR G+A+SL+ ++++ IE IG KL E+
Sbjct: 295 VELVVNHVIPNVPKEYIHRVGRTARAGRNGMAVSLITPHDVKLLHAIEDAIGTKLTEYKV 354
Query: 382 EEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR 413
+++E++ +L +++ AKR +++ + ++ NKR++
Sbjct: 355 DDKEIVTILTQISVAKREAEIKLDETDFFEKKMINKRKK 393
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/402 (45%), Positives = 258/402 (64%), Gaps = 12/402 (2%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
V +F+ELGL +VE C+ + P+ Q IP L GKD+IG ++TG+GKT +F LPI
Sbjct: 12 VSSFEELGLGQWIVETCKALNIMKPTPCQVACIPQTLNGKDIIGSSETGTGKTMSFVLPI 71
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+ L FA VL+PTRELA QI +QF+A+G+ +S+R AV+VGG++ ++Q
Sbjct: 72 VDKL------SVDPCGVFAIVLTPTRELAFQIYDQFKAIGNPMSIRVAVVVGGLESIRQA 125
Query: 127 LALGKRPHIVVATPGRLMDHLT---NTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
L RPH+VVATPGRL D T + + F L ++++LVLDEADRLL D F SL IL+
Sbjct: 126 TELENRPHVVVATPGRLADLFTIEDSVERFHLHSIRFLVLDEADRLLEDGFASSLSTILD 185
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNP-VKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
V+P RQT ++SATM K+++L + C + ++S+YS V L+Q Y +P + K C
Sbjct: 186 VLPVNRQTLVYSATMNDKMEQLSKTCRSECFIYTSSSSRYSQVRELEQFYLLIPFQMKTC 245
Query: 243 YLVYILTE-VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL Y+L + S ++FT +C + L L L LG + M Q +RL A++ +
Sbjct: 246 YLAYLLLYGFPSFSCIIFTGSCKRCQHLFLTLEYLGLNVGVLHSKMKQMERLKAIHNIQR 305
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G ILICTDVASRGLDIP V++V+NY IP+ YIHRVGRTARAG G AISLV+Q+E
Sbjct: 306 GTIRILICTDVASRGLDIPQVELVVNYHIPSKPSTYIHRVGRTARAGNRGKAISLVSQFE 365
Query: 362 LEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQM 402
+E + IE+ + ++L EF +E+EVL +L V +A+R +++
Sbjct: 366 VEIFRNIERRLERELVEFGHCKEKEVLKILTDVLKAERKAKL 407
>gi|90076578|dbj|BAE87969.1| unnamed protein product [Macaca fascicularis]
Length = 255
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 196/243 (80%), Gaps = 7/243 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 19 EEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+D
Sbjct: 79 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 133 MSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 192
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK-D 241
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 193 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKVK 252
Query: 242 CYL 244
C L
Sbjct: 253 CLL 255
>gi|328720638|ref|XP_001950474.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Acyrthosiphon pisum]
Length = 470
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 181/409 (44%), Positives = 248/409 (60%), Gaps = 10/409 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
F+ L L L + + VG +P++IQ IP L+G D IG A+TGSGKT AFALPILQ
Sbjct: 2 NFENLNLSKYLCDQLKAVGVNSPTEIQKNCIPKILDGIDCIGCAKTGSGKTLAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA +L+PTRELA QI++QF +G +LR V+ GG++M+ Q
Sbjct: 62 KLWE------EPYGIFALILTPTRELAYQIADQFAVIGKPKNLRHCVVTGGMEMIVQARE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L +PHIVV+TPGRL DHL + FSL +++LVLDEADRLL F+K + I +P+
Sbjct: 116 LSNKPHIVVSTPGRLADHLESCDTFSLKRIQFLVLDEADRLLGGKFDKQIATIFKALPKE 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATMT ++K++ KN E+ ++ TVD L+Q Y P KD YLV I+
Sbjct: 176 RQTLLFSATMTDTLEKVKMITKKNTFVYESTAEVKTVDELEQFYVLCPYNVKDGYLVEIV 235
Query: 249 TEVSASS----TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+ M+FT TC +LL + L +G + + +SQ +RL L KFK+
Sbjct: 236 RQFREKDEKGLIMIFTDTCKNCQLLHMTLNEVGFDTVSLHAMISQRQRLAGLAKFKSHVS 295
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
ILI TDVASRGLDIP+V +VIN+ IP N+ DY+HRVGRTARAGR G A+S+V Q++++
Sbjct: 296 KILIATDVASRGLDIPAVSLVINHIIPNNATDYVHRVGRTARAGRQGRAVSIVTQHDIKL 355
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
IE I +L E+ V +L +V KR +Q+ + ++ RR
Sbjct: 356 VKAIEAKINIRLKEYDVSGLHVAKILTQVHVTKREAQIKLDETDFDERR 404
>gi|412990251|emb|CCO19569.1| ATP-dependent RNA helicase DBP8 [Bathycoccus prasinos]
Length = 420
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/401 (43%), Positives = 248/401 (61%), Gaps = 11/401 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE ++TF LG++ L E +G + +Q IP L+G D+IG +QTGSGKT F
Sbjct: 4 EELSIRTFCSLGIKKWLAENAFKLGLCEATTVQKACIPPILKGLDVIGTSQTGSGKTATF 63
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL L + FA ++PTRELA+QISEQF AL +G++LRC V+ GG ++
Sbjct: 64 ALPILHIL------SQDSYGIFALCMTPTRELAVQISEQFSALSAGLTLRCQVITGGEEI 117
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLDE 180
QT ++ +RPHI+VATPGRLMDH N+ L++LVLDEADRLL FE L
Sbjct: 118 QAQTRSILRRPHIIVATPGRLMDHFLNSPQVIGCFQNLRFLVLDEADRLLEPSFESELRI 177
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
+ IP RQT LFSA++T+ + LQ + + EA V + +Q+Y F+P +
Sbjct: 178 LFENIPSKRQTLLFSASITRNIAALQHITMNDAFHFEAFEGLKAVSSCRQEYCFLPRVMR 237
Query: 241 DCYLVYILTE---VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
D YL++IL + S+++FT T + +L+ +L LG + + Q +R +
Sbjct: 238 DAYLLHILQQRENWDIRSSIIFTSTVRSCMILSGILDKLGIVTVSLHSMKKQKERKDSFA 297
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FK+GE +IL+ TD+ASRGLDIP+VDMVINY++P SKDYIHR+GRTARAGR+G +I+LV
Sbjct: 298 RFKSGEVSILLATDIASRGLDIPTVDMVINYEVPIASKDYIHRIGRTARAGRSGRSITLV 357
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
Q++++ +IE I K+ EEE++ + V A+R
Sbjct: 358 TQHDVKIVQKIEDAIDSKMRCLSLPEEEIVKNMNSVGSARR 398
>gi|196002119|ref|XP_002110927.1| hypothetical protein TRIADDRAFT_21982 [Trichoplax adhaerens]
gi|190586878|gb|EDV26931.1| hypothetical protein TRIADDRAFT_21982 [Trichoplax adhaerens]
Length = 435
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 259/421 (61%), Gaps = 21/421 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LGL LV+ C +G + +Q + IP L+G++ IG A+TGSGKT AFALPILQ
Sbjct: 6 SFADLGLNTWLVKQCRAIGLAKATAVQEKCIPPILQGQNCIGCAKTGSGKTAAFALPILQ 65
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +A +L+PTRELA Q+++QF A G I +R A+++GG+D++ Q++A
Sbjct: 66 NL------AKEPFGIYALILTPTRELAFQLADQFRAFGKPIGMRDAIVIGGLDIISQSIA 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHIV+ATPGRL D + N +K+LVLDEADRLL F L +I ++P
Sbjct: 120 LSKKPHIVIATPGRLADLIDNDSKVHFSKIKFLVLDEADRLLEASFGPDLGKIFEILPED 179
Query: 189 RQTYLFSATMTKKVKKLQR-ACLKNPVKIEAASK--YSTVDTLKQQYRFVPAKYKDCYLV 245
RQT LFSATMT + + Q A K P E +TV+ L Q Y +PA KDCY V
Sbjct: 180 RQTLLFSATMTNAMARAQEVAASKKPFIYEDTDMKISATVEQLDQHYLLMPAVVKDCYFV 239
Query: 246 YILTEVSAS-------STMVFTRTCD-----ATRLLALMLRNLGQRAIPISGHMSQSKRL 293
Y++ ++S + M+FT T + + ++LA+ML L + M Q +RL
Sbjct: 240 YLIKQLSLELEKNPRWNMMIFTSTYNFSNRRSCQILAIMLSRLEFSCAALHSLMPQRQRL 299
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
G+L +FK G IL+ TDVASRGLDIP+V+ V+NY++P ++ DYIHRVGRTARAG+ G+A
Sbjct: 300 GSLARFKNGLLKILVATDVASRGLDIPTVEAVVNYNVPLSADDYIHRVGRTARAGKKGMA 359
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
++L+ QY++ IE KL ++ +E +VL LL VT ++ + +++S R R
Sbjct: 360 VTLMTQYDVNRIHNIETTTNVKLLKYEVDEHDVLKLLNIVTMLRKEIDVRLEESNFGRNR 419
Query: 414 K 414
+
Sbjct: 420 E 420
>gi|19074653|ref|NP_586159.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|74621115|sp|Q8SR63.1|RRP3_ENCCU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|19069295|emb|CAD25763.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|449330220|gb|AGE96481.1| putative ATP-dependent RNA helicase [Encephalitozoon cuniculi]
Length = 400
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 248/404 (61%), Gaps = 7/404 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L + + L++ C+ G P+++Q + IP L G D+I ++QTGSGKT AF LPI+
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL+ +N+ +F+ V++PTREL+ QI+E F LR +LVGG + Q L
Sbjct: 63 LLQ--KNR----SFYCLVVAPTRELSSQIAECFNMF-QATGLRVCLLVGGANFNVQANQL 115
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPH+VV TPGR+ +H+ TK F ++ VLDEADR DF + L+ I+ + R
Sbjct: 116 SKRPHVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLETIIPSLREKR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LF+ATM+ ++ KL + LK P I A KY TV LK+ Y FV K+K+ LV +L
Sbjct: 176 QTLLFTATMSDEISKLSSSILKRPKTIRTAEKYETVPALKEYYLFVAMKWKNSALVELLE 235
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S +VF C R+++L L LG + + G +SQ KR A+ FK N+L+C
Sbjct: 236 MSQGMSVIVFVSMCVTARVMSLALARLGFCSEALHGELSQEKREEAMRSFKESRFNVLVC 295
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+ SRGLDI VD+VIN+D+P + KDYIHRVGRTARAGR+G AI+LV QY++E +IE
Sbjct: 296 TDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTARAGRSGTAITLVTQYDVEQIQKIE 355
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
+ KKL EF ++ + R+ EA + +Q T+K+ + RR
Sbjct: 356 FTLEKKLEEFKMMKKNFGTICARIEEAIQEAQETLKEERKRNRR 399
>gi|256087842|ref|XP_002580072.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646373|emb|CCD58966.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 454
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/387 (44%), Positives = 245/387 (63%), Gaps = 20/387 (5%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FKELG+ +E+ + +GW PS+IQ +AIP AL KD++GLA+TGSGKT AFA+PIL
Sbjct: 4 KSFKELGVCNEICDVISTLGWVKPSEIQLKAIPAALRKKDIVGLAETGSGKTAAFAIPIL 63
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q LL + FA +L+PTRELA+Q+ F LG L+ LVGG + Q
Sbjct: 64 QDLLSKPRHN------FALILTPTRELALQVKCLFMELGDKFGLKVVCLVGGQHVEDQVR 117
Query: 128 ALGK-RPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L + + H++V TPGR++ HL NTK L ++Y VLDEAD++L D FE+ L I+ +
Sbjct: 118 DLKRLKFHVIVGTPGRVVYHLENTKELRLNHVRYFVLDEADQMLEDTFEQQLAFIITKLH 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+QT+L+SATMT+ V K+++ C K+PV +E +SKYS VD L + F+P K KD YL+Y
Sbjct: 178 PNKQTFLYSATMTQNVDKIRKVCTKSPVILEVSSKYSKVDKLDHAFVFIPDKEKDFYLIY 237
Query: 247 ILTEVSA---SSTMVFTRTCDATRLLALMLRNLGQ----RAIPISGHMSQSKRLGALNKF 299
+L + S +++FT T + + ML++L + P++G M Q KR +L F
Sbjct: 238 LLLSSKSADKSRSIIFTSTWRESFRIVAMLKSLADVISAASAPLNGVMQQDKRQSSLFDF 297
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIP------TNSKDYIHRVGRTARAGRTGVA 353
+ G +IL+ TD+ASRGLD P VD+VINYD+P ++K YIHRVGRTARAGR G A
Sbjct: 298 RTGRVSILVATDLASRGLDFPDVDLVINYDVPRRPSWSDSAKAYIHRVGRTARAGRHGRA 357
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFP 380
I+ V Y + IE + +++P+ P
Sbjct: 358 ITFVTPYSVTRLKAIESALNERIPQLP 384
>gi|303390992|ref|XP_003073726.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302874|gb|ADM12366.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 400
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/404 (43%), Positives = 243/404 (60%), Gaps = 7/404 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL + D LV+AC+ G P++IQ + IP L G D+I ++QTGSGKT AF LPI+
Sbjct: 3 FDELNIDDSLVQACQRNGITRPTEIQKQVIPMVLGGNDIIAVSQTGSGKTLAFVLPIVSR 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL +N+ +FF V++PTREL+ QI+E F GS LR +LVGG + Q L
Sbjct: 63 LL--LKNR----SFFCLVVAPTRELSSQIAECFNMFGS-TGLRVCLLVGGTNFNLQANQL 115
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K PHIVV TPGR+ +H+ TK F ++ LVLDEADR DF + L+ I+ + R
Sbjct: 116 SKHPHIVVGTPGRIAEHILKTKSFKAERIRKLVLDEADRFFEQDFVEDLETIIRSLREKR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LF+ATM+ ++ KL + L P I Y TV LK+ Y F K+K LV L
Sbjct: 176 QTLLFTATMSNEISKLSSSILIKPKTIRVVEGYETVSALKEYYFFTAMKWKSSALVEFLE 235
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ST+VF C R+++L L LG + + G +SQ KR + FK + ++L+C
Sbjct: 236 MNPGASTIVFVSMCITARVMSLALSKLGFHSEALYGELSQEKREETMRMFKENKFSVLVC 295
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDV SRGLDI VD+VIN+D+P + KDY+HRVGRTARAGR G AI+LV QY++E ++E
Sbjct: 296 TDVGSRGLDISHVDLVINFDVPKSGKDYVHRVGRTARAGRAGTAITLVTQYDVEQLQRVE 355
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
++ K L EF ++ + E+V E + +Q +K + RR
Sbjct: 356 FVLKKSLEEFKPVKKNFESIREKVEETIQEAQEILKGERKRNRR 399
>gi|358341811|dbj|GAA31574.2| ATP-dependent RNA helicase DDX47/RRP3 [Clonorchis sinensis]
Length = 464
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/409 (43%), Positives = 260/409 (63%), Gaps = 22/409 (5%)
Query: 14 GLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEI 73
G+ E+++ + +GW PS+IQA+ IP AL GKD++GLA+TGSGKT AFA+PILQ L+
Sbjct: 21 GICQEILDVIKKLGWSKPSEIQAKTIPQALRGKDVVGLAETGSGKTAAFAIPILQDLISK 80
Query: 74 AENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALG-KR 132
++ FA VL+PTRELA+Q+ QF LG LR LVGG + QT L +
Sbjct: 81 PKHN------FALVLTPTRELALQLKSQFMDLGEVYGLRVICLVGGQHVEDQTRDLKVSK 134
Query: 133 PHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTY 192
HI++ TPGR+ HL N+K L ++YLVLDEAD++L D FE L I+ +P +TY
Sbjct: 135 YHIIIGTPGRICYHLENSKDLRLNHIRYLVLDEADQMLEDTFEDQLSAIIANLPPNHRTY 194
Query: 193 LFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL---T 249
L+SAT++ KV+KLQ C ++P+ +E + +YS V L + F+P + +D YLVY L +
Sbjct: 195 LYSATLSPKVQKLQEICTRSPIIVEVSLEYSKVKKLDHAFVFIPEQERDVYLVYALKTIS 254
Query: 250 EVSASSTMVFTRTCDATRLLA----LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+V+ S T+VFT T + +A + + LG +A+P++G M Q KR +L F+AG+
Sbjct: 255 KVTNSRTIVFTTTWRESFRIASLLNSLSQLLGGKAVPLNGAMQQDKRQNSLFSFRAGQAA 314
Query: 306 ILICTDVASRGLDIPSVDMVINYDIP------TNSKDYIHRVGRTARAGRTGVAISLVNQ 359
L+ TD+ASRGLDIP VD++INYD+P ++K YIHRVGRTARAGR+G AI+LV
Sbjct: 315 FLVATDLASRGLDIPDVDLIINYDVPRRPSWSDSAKAYIHRVGRTARAGRSGRAITLVTP 374
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVL--LLLERVTEAKRISQMTIKD 406
Y IE +G+ +P+ P + L E+++ A R ++ +I++
Sbjct: 375 YSATRLKAIEAALGECIPQLPWPGMNCVGADLREQISAANRQARESIRE 423
>gi|341882300|gb|EGT38235.1| hypothetical protein CAEBREN_08382 [Caenorhabditis brenneri]
Length = 554
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/458 (40%), Positives = 269/458 (58%), Gaps = 31/458 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K F++LG+ + + + + KT + +QA IP L+G D++G A+TG+GKT AF
Sbjct: 75 ENMTTKKFQQLGVASWITQQLQTMHIKTATPVQAACIPKILDGSDILGCARTGTGKTLAF 134
Query: 63 ALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
A+PILQ L +V + FA +L+PTRELA QI++QF A+G I+L+C+V+VGG
Sbjct: 135 AIPILQKL--------SVDPYGIFALILTPTRELAFQIADQFVAVGKPITLKCSVIVGGR 186
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKS 177
++QQ L +RPHIVVATPGRL D + + + K + VLDEADR+L +
Sbjct: 187 SLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKIQFFVLDEADRMLEGQYNDQ 246
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY--STVDTLKQQYRFV 235
L I IP+ RQT L SAT+T + L + + P E + +TVD L+Q++
Sbjct: 247 LKPIFESIPQKRQTLLLSATITNNINMLHKVSTRKPYFFEDKTNADETTVDRLEQKFVVC 306
Query: 236 PAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
P KD YLVY++ S SS M+F +TC + LA M LG R + ++Q +
Sbjct: 307 PVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIAQKQ 366
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
RL AL+ F++ ++ICTDVASRGLDIP VD+V+N+++P K Y+HRVGR+ARAGR G
Sbjct: 367 RLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYVHRVGRSARAGRFG 426
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS--GN 409
A+S V QY++E +E+ IGKKL E + V + +V AKR +++ + + G
Sbjct: 427 SALSFVTQYDVELLQAVEQTIGKKLEELKVNAKHVTKYVTQVLVAKREAELKLDNQKFGE 486
Query: 410 KR---RRK----GGDEDDDIGRQFGINKKK---LSKRK 437
K+ RRK G ++D+ R K + SKRK
Sbjct: 487 KKEINRRKELLMSGMSEEDVDRHMENMKTRRVTTSKRK 524
>gi|115532548|ref|NP_001040789.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
gi|351065690|emb|CCD61680.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
Length = 561
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/434 (42%), Positives = 259/434 (59%), Gaps = 29/434 (6%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K F +LG+ + + + + KT + +QA IP LEG D++G A+TG+GKT AFA+PIL
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 68 QALLEIAENQRTVPAF--FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
Q L +V + +A +L+PTRELA QI+EQF ALG I+L+C+V+VGG ++ Q
Sbjct: 149 QKL--------SVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQ 200
Query: 126 TLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
L +RPH+VVATPGRL D + +T +++ VLDEADR+L + L I
Sbjct: 201 ARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIF 260
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK--YSTVDTLKQQYRFVPAKYK 240
I RQT L SAT+T + L R + P E K STVD L+Q+Y P K
Sbjct: 261 ESISEKRQTLLLSATITNNINMLHRVSTRKPYFFEDKGKDDESTVDRLEQKYVVCPVAVK 320
Query: 241 DCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
D YLVY++ S SS M+F +TC + LA M LG R + + Q +RL AL
Sbjct: 321 DAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAAL 380
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
+ F++ ++ICTDVASRGLDIP VD+V+N+++P K YIHRVGR+ARAGR G A+S
Sbjct: 381 SAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSF 440
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS--GNKR--- 411
V QY++E +E++IGKKL E + V + +V AK+ +++ +++ G K+
Sbjct: 441 VTQYDVELLQAVEQVIGKKLDELKVSPKHVTKYVTQVLVAKKEAELKLENQKFGEKKEIN 500
Query: 412 RRK-----GGDEDD 420
RRK G DED+
Sbjct: 501 RRKELLMSGMDEDE 514
>gi|341902886|gb|EGT58821.1| hypothetical protein CAEBREN_15104 [Caenorhabditis brenneri]
Length = 554
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/458 (40%), Positives = 269/458 (58%), Gaps = 31/458 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K F++LG+ + + + + KT + +QA IP L+G D++G A+TG+GKT AF
Sbjct: 77 ENMTTKKFQQLGVASWITQQLQTMHIKTATPVQAACIPKILDGSDILGCARTGTGKTLAF 136
Query: 63 ALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
A+PILQ L +V + FA +L+PTRELA QI++QF A+G I+L+C+V+VGG
Sbjct: 137 AIPILQKL--------SVDPYGIFALILTPTRELAFQIADQFVAVGKPITLKCSVIVGGR 188
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKS 177
++QQ L +RPHIVVATPGRL D + + + K + VLDEADR+L +
Sbjct: 189 SLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKIQFFVLDEADRMLEGQYNDQ 248
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY--STVDTLKQQYRFV 235
L I IP+ RQT L SAT+T + L + + P E + +TVD L+Q++
Sbjct: 249 LKPIFESIPQKRQTLLLSATITNNINMLHKVSTRKPYFFEDKTNADETTVDRLEQKFVVC 308
Query: 236 PAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
P KD YLVY++ S SS M+F +TC + LA M LG R + ++Q +
Sbjct: 309 PVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIAQKQ 368
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
RL AL+ F++ ++ICTDVASRGLDIP VD+V+N+++P K Y+HRVGR+ARAGR G
Sbjct: 369 RLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYVHRVGRSARAGRFG 428
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS--GN 409
A+S V QY++E +E+ IGKKL E + V + +V AKR +++ + + G
Sbjct: 429 SALSFVTQYDVELLQAVEQTIGKKLEELKVNAKHVTKYVTQVLVAKREAELKLDNQKFGE 488
Query: 410 KR---RRK----GGDEDDDIGRQFGINKKK---LSKRK 437
K+ RRK G ++D+ R K + SKRK
Sbjct: 489 KKEINRRKELLMSGMSEEDVDRHMENMKTRRVTTSKRK 526
>gi|449525593|ref|XP_004169801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
[Cucumis sativus]
Length = 224
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 152/177 (85%), Positives = 169/177 (95%)
Query: 231 QYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
QY F+PAKYK+CYLVYILTE+S S++MVFTRTCDATRLL+L+LRNLG RAIPISG M+Q+
Sbjct: 1 QYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQA 60
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGR+
Sbjct: 61 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRS 120
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
GVAISLVNQYELEWY+QIEKLIGKKLP+F A+EEEVL+LLERV EAKRIS M IK++
Sbjct: 121 GVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKIKET 177
>gi|402591826|gb|EJW85755.1| Ddx49 protein [Wuchereria bancrofti]
Length = 461
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 257/433 (59%), Gaps = 26/433 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL L + ++ TP+ +Q IPH L G D++G A+TG+GKT AF LPIL
Sbjct: 45 TFAELGLSKWLCDQLRHLAINTPTPVQVNCIPHILAGSDVLGCAKTGTGKTLAFGLPILH 104
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E+A + + A +L+PTRELA+QI +QF ALG+ I L+ ++VGG D + Q+
Sbjct: 105 ---ELALDPYGICAL---ILTPTRELAMQIGDQFAALGTSIGLKIGIIVGGKDRVAQSSD 158
Query: 129 LGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPHI+VATPGRL DHL + G L++LVLDEADRLL+ + L IL +
Sbjct: 159 LARRPHIIVATPGRLADHLESDSENTGKLFEKLRFLVLDEADRLLDGQYSVELKTILTFL 218
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT+T + +L + +K P E S+ +TVD L+Q+Y P KD YLV
Sbjct: 219 PKQRQTLLFSATITSALSQLHQVSVKKPYFFEDKSEIATVDKLEQKYVLCPCAVKDAYLV 278
Query: 246 YILTEVSA----SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
Y++ S ++F+ TC + LA+M LG + + +SQ +R +L KF++
Sbjct: 279 YVVKNFHEKHPESLILIFSHTCRECQALAIMFHGLGFKVGSLHSQISQQERTSSLTKFRS 338
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G ILICTDVASRGLDIP VD+V+N+++P N K YIHRVGR+ARAGR G A+ V QY+
Sbjct: 339 GRIKILICTDVASRGLDIPHVDLVVNHNVPQNPKTYIHRVGRSARAGRFGCALLFVTQYD 398
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK--GGDED 419
+ ++ + + + L E E+ L + E K I NKR+ G +
Sbjct: 399 IYLLQEVTQYVTQVL--VTKREAEIKLDQQNFGERKMI---------NKRKEMLIAGLDP 447
Query: 420 DDIGRQFGINKKK 432
D++ R + +++
Sbjct: 448 DEVERTLKMQREQ 460
>gi|336373626|gb|EGO01964.1| hypothetical protein SERLA73DRAFT_49383 [Serpula lacrymans var.
lacrymans S7.3]
Length = 474
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 188/445 (42%), Positives = 264/445 (59%), Gaps = 35/445 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +L + L+ A + +TP++IQ IP L G+D IG A+TGSGKT AFALPILQ
Sbjct: 42 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLLSGRDCIGNAKTGSGKTIAFALPILQ 101
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA VL+PTRELA QIS+QF LG+G+S+R AV+VGG+DMM Q L
Sbjct: 102 KLSEDPY------GIFALVLTPTRELAFQISDQFAVLGAGLSIRTAVIVGGMDMMTQALE 155
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L RPH+VVATPGR++DHL ++ G +SL +K+LVLDEADRLL F L + +V+P+
Sbjct: 156 LDNRPHVVVATPGRIVDHLRSSSGEWSLSRIKFLVLDEADRLLTPTFSPELSYLFDVLPK 215
Query: 188 MRQTYLFSATMTKKVKKL----QRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
RQT LF+AT+T + KL R + P + TV TL Q + VP+ ++ Y
Sbjct: 216 ERQTCLFTATLTPSIDKLAEVPPRPGKQKPFIHRMNANIETVVTLNQNFVLVPSHVRETY 275
Query: 244 LVYIL---TEVSAS--------STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 292
L ++L E++AS T++F L +L+ L R+ + ++Q +R
Sbjct: 276 LYHLLCNPPELAASLRQLVQPPPTIIFCTKPRTAAYLTSLLKTLSIRSTALHSRLTQRER 335
Query: 293 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 352
L +L+ F++ +L+ TDV +RGLDI V MVIN+D+P ++Y HRVGRTARAG+ G+
Sbjct: 336 LTSLSLFRSSVIPVLVSTDVGARGLDIEDVAMVINWDLPNEPEEYTHRVGRTARAGKAGI 395
Query: 353 AISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
AIS V + + E L+IE IG KL E E +VL L V+ AKR++ M + DS
Sbjct: 396 AISFVTEKDEERVLKIESRIGTKLAEMILPEGKVLEKLTSVSTAKRLANMELHDS----- 450
Query: 413 RKGGDEDDDIGRQFGINKKKLSKRK 437
D G++ I+ K KR+
Sbjct: 451 --------DFGKREEIHNIKKQKRR 467
>gi|268529640|ref|XP_002629946.1| Hypothetical protein CBG03667 [Caenorhabditis briggsae]
Length = 565
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/431 (40%), Positives = 258/431 (59%), Gaps = 26/431 (6%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+ F ELG+ + + + + KT + +QA IP L+G D++G A+TG+GKT AFA+PIL
Sbjct: 93 RKFSELGVSSWITQQLQTMHIKTATPVQAACIPRILDGSDILGCARTGTGKTLAFAIPIL 152
Query: 68 QALLEIAENQRTVPAF--FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
Q L ++ + +A +L+PTRELA QI++QF A+G I+L+C+V+VGG ++ Q
Sbjct: 153 QKL--------SIDPYGIYALILTPTRELAFQIADQFTAVGKPITLKCSVIVGGRSLIHQ 204
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPHIVVATPGRL D + + +++ VLDEADR+L + L I I
Sbjct: 205 ARELSERPHIVVATPGRLTDLIESDPEVIAKKIQFFVLDEADRMLEGQYNDQLKPIFQSI 264
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK--YSTVDTLKQQYRFVPAKYKDCY 243
P RQT L SAT+T+ + L + + P E K +TVD L+Q++ P KD Y
Sbjct: 265 PEKRQTLLLSATITQNINTLHKVSTRKPYFFEDKGKDDETTVDRLEQKFVVCPVAVKDAY 324
Query: 244 LVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
LVY++ S SS M+F +TC + LA M LG R + + Q +RL AL+ F
Sbjct: 325 LVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAF 384
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
++ ++ICTDVASRGLDIP VD+V+N+++P K YIHRVGR+ARAGR G A+S V Q
Sbjct: 385 RSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQ 444
Query: 360 YELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRR 412
Y++E +EK IGKKL E + V + +V AK+ +++ +++ N+R+
Sbjct: 445 YDVELLQAVEKTIGKKLDELKVSAKHVTKYVTQVLVAKKEAELKLENQKFGERKEINRRK 504
Query: 413 R---KGGDEDD 420
KG +E+D
Sbjct: 505 EMLMKGMNEED 515
>gi|13161879|emb|CAC33024.1| hypothetical protein [Takifugu rubripes]
Length = 476
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/397 (44%), Positives = 244/397 (61%), Gaps = 15/397 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL D L++ C+ +G + + +Q +P L+G D +G A+TGSGKT AF LP+LQ
Sbjct: 4 FSSLGLSDWLIKQCKQLGIQKATPVQENCVPAILQGSDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTR LA QI+EQF LG + L+ ++VGG+ M+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRSLAYQIAEQFRVLGKPLGLKDCIIVGGMGMVTQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
+PH+VVATPGRL DH+ ++ FSL +++LV+DEADRLL DF K L+ IL +P
Sbjct: 118 SNQPHVVVATPGRLADHIRSSSTFSLAKIQFLVMDEADRLLEQGCTDFTKDLETILTAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++L+ + P E+ S+ TV+ L Q+Y P K KD YLV+
Sbjct: 178 AKRQTLLFSATLTDTLQELKHIAMNKPFFWESKSECRTVEELDQRYILTPEKVKDAYLVH 237
Query: 247 ILTEVSAS----STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ + S ++FT TC ++L +ML+ I + M Q +R L KFKA
Sbjct: 238 LIQTFTDQHDDWSIIIFTSTCKYCQILTMMLQKFHFPTISLHSMMKQVQRFANLAKFKAS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVA+R LDIP+V +VI + P K YIHRVGRTARAG GV+I+LV QY++
Sbjct: 298 VYKILIATDVAARCLDIPTVQVVITNNTPGLPKIYIHRVGRTARAGN-GVSITLVTQYDI 356
Query: 363 EWYLQIEKLIGK-KLPEFPAEEEEVLLLLERVTEAKR 398
IE+ I + KL EFP EE+EVL +L +V +R
Sbjct: 357 HLVHSIEEQIRETKLKEFPVEEKEVLKILTQVNVTRR 393
>gi|308484167|ref|XP_003104284.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
gi|308258253|gb|EFP02206.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
Length = 572
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 252/420 (60%), Gaps = 23/420 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K F ELG+ +++ + + T + +QA IP L G D++G A+TG+GKT AF
Sbjct: 35 ENMTTKKFSELGVSSWIIQQLQTMHISTATPVQAACIPKILSGSDILGCARTGTGKTLAF 94
Query: 63 ALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
A+PILQ L ++ + +A +L+PTRELA QI++QF A+G I+L+C+V+VGG
Sbjct: 95 AIPILQKL--------SIDPYGIYALILTPTRELAFQIADQFSAVGKPITLKCSVIVGGR 146
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT----LKYLVLDEADRLLNDDFEK 176
++ Q L RPHIVVATPGRL D L N+ + +++ VLDEADR+L +
Sbjct: 147 SLIHQARELSDRPHIVVATPGRLAD-LINSDAEIIAKVFKKIQFFVLDEADRMLEGQYND 205
Query: 177 SLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK--YSTVDTLKQQYRF 234
L I IP RQT L SAT+T + L + + P E SK STVD L+Q++
Sbjct: 206 QLKPIFEAIPAKRQTLLLSATITNNINMLHKVSTRKPYFFEDKSKDAESTVDRLEQKFVV 265
Query: 235 VPAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
P KD YLVY++ S SS M+F +TC + LA M LG R + + Q
Sbjct: 266 CPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQK 325
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
+RL AL+ F++ N++ICTDVASRGLDIP VD+V+N+++P +K YIHRVGR+ARAGR
Sbjct: 326 QRLAALSAFRSKTLNVIICTDVASRGLDIPHVDLVVNHNVPQCAKTYIHRVGRSARAGRF 385
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
G A+S V QY++E +E+ IGKKL E + E + ++A++I++ K+S K
Sbjct: 386 GSALSFVTQYDVELLQAVEQTIGKKLEELKIQNSEK--FDSKASKARQITRKIWKNSIQK 443
>gi|396082239|gb|AFN83849.1| ATP-dependent RNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 397
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/402 (42%), Positives = 242/402 (60%), Gaps = 7/402 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL + + L+ CE G P++IQ + IP L G D+I ++QTGSGKT AF LPI+
Sbjct: 3 FDELRVDESLIRICEGNGITKPTEIQEQVIPVILGGNDIIAVSQTGSGKTLAFVLPIVSC 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL +F+ +++PTREL+ QI+E F LR +LVGG Q L
Sbjct: 63 LLLKDR------SFYCLIIAPTRELSSQIAECFNMFEE-TGLRVCLLVGGTSFNVQANQL 115
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K PH+VV TPGR+ +H+ TK F + ++ LVLDEADR DF L+ I+ + R
Sbjct: 116 SKHPHVVVGTPGRIAEHVLKTKSFRIERVRKLVLDEADRFFEQDFVDDLETIIRSLKEKR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LF+ATM+ ++ KL + L+NP I KY TV TLK+ Y F+ K+K+ LV +L
Sbjct: 176 QTLLFTATMSDEISKLSNSILRNPKIIRVVEKYETVPTLKEYYIFIAMKWKNASLVELLE 235
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S +VF C R+++L L LG + + G + Q KR + FK + N+L+C
Sbjct: 236 MNPGISVIVFVSMCITARVMSLALSKLGFHSEALHGELIQEKREETMRMFKESKFNVLVC 295
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDV SRGLDI VD+VIN+D+P N KDYIHRVGRTARAGR+G AI+LV QY++E + ++E
Sbjct: 296 TDVGSRGLDISHVDLVINFDVPKNGKDYIHRVGRTARAGRSGTAITLVTQYDVEQFQRME 355
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+ K L EF +++ L +++ EA +Q +K+ N+R
Sbjct: 356 FALKKSLEEFRPMKKDFGLTCKKIGEAIESAQEILKEERNRR 397
>gi|339243587|ref|XP_003377719.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
gi|316973448|gb|EFV57036.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
Length = 563
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/436 (41%), Positives = 266/436 (61%), Gaps = 21/436 (4%)
Query: 4 EKEVKT-FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+KE +T +LGL LVE C +G PS +Q IP L GKD IG ++TG+GKT AF
Sbjct: 100 KKETRTSLHDLGLSSWLVEQCAVMGIVEPSPVQLNCIPEILIGKDAIGCSKTGTGKTLAF 159
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PI+Q L E +A VL+P+RELA QI EQF+ LG + LR +++VGG DM
Sbjct: 160 AIPIIQRLSEDPY------GIYALVLTPSRELAFQIGEQFQVLGKPLGLRTSIVVGGRDM 213
Query: 123 MQQTLALGKRPHIVVATPGRLMDH-LTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
++Q + +PHI++ATPGRL DH L+ + +K+ VLDEADRLL+ ++ L+ I
Sbjct: 214 IEQANEIANQPHILIATPGRLADHILSRSDENWFHKIKFFVLDEADRLLDGQYDLQLETI 273
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+ +P+ RQT LFSAT+T + +LQ +K P + S TVDTL+Q+Y P KD
Sbjct: 274 IEKLPKERQTLLFSATITDALCRLQELSVKKPFFWQEQSCTVTVDTLEQRYVLCPKSVKD 333
Query: 242 CYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
Y+ Y++ + SS ++F+ +C + L LM +LG + + +SQ +RL + N
Sbjct: 334 AYVTYVVKLFTDKNPQSSVLIFSHSCYECQALTLMFADLGFKVGALHSMISQRERLSSFN 393
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
FK+ + ILICTDVASRGLD+P VD+VIN++IP +K YIHRVGR+ARAGR+G A++ +
Sbjct: 394 LFKSNQLKILICTDVASRGLDLPFVDLVINHNIPAVAKTYIHRVGRSARAGRSGRAVTFI 453
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR--ISQMTIKDSGNKR---R 412
QY++ IEK I ++ E +++V + V AKR I +M + G +R R
Sbjct: 454 TQYDIALLQAIEKAINCQMNELKVNDKKVSNYVTEVLVAKREAILKMDEQHFGERRAINR 513
Query: 413 RK----GGDEDDDIGR 424
RK G + +D+ R
Sbjct: 514 RKEMILSGLDPEDVDR 529
>gi|145342427|ref|XP_001416184.1| Ddx49-related DEAD box helicase superfamily II protein
[Ostreococcus lucimarinus CCE9901]
gi|144576409|gb|ABO94477.1| Ddx49-related DEAD box helicase superfamily II protein
[Ostreococcus lucimarinus CCE9901]
Length = 417
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 251/406 (61%), Gaps = 11/406 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LGL L+ +G+ PS +Q IP L+G+D+IG+A TGSGKT AFALP++
Sbjct: 3 SFDKLGLSGVLLRNIRQLGFTEPSSVQKSCIPPILQGRDVIGIANTGSGKTAAFALPVVH 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + V FA LSPTRELA QI+EQF G+SLRC V++GG D+++Q +
Sbjct: 63 VL---SVDPHGV---FALCLSPTRELAYQIAEQFAVFSVGMSLRCEVVIGGEDLLRQASS 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L KRPHIVVATPGRL++H ++ LK+L+LDEADRLL+ FE L +L +P
Sbjct: 117 LSKRPHIVVATPGRLLEHFMHSSDTIECFQRLKFLILDEADRLLDSSFEAELRYLLTNLP 176
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT +FSAT+T V L+ + E + +T Q Y F+P K KD YLV+
Sbjct: 177 QKRQTLMFSATITPSVIALKPLLGQRAFYYEEKGELTTPTGCAQYYCFMPEKVKDTYLVH 236
Query: 247 ILTE-VSASST--MVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+L E VS+ ST M+F T +++ ML NLG A + Q R LN FK+
Sbjct: 237 VLRELVSSKSTRAMIFCPTVQKCEMVSHMLHNLGIAACSLHAAKKQRDRHSTLNAFKSTM 296
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVA+RGLD+P V++V+NYDIP++ + YIHR+GRTAR TG AISLV QY++
Sbjct: 297 VKILVATDVAARGLDLPDVELVVNYDIPSDPRQYIHRIGRTARFHATGQAISLVTQYDVG 356
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN 409
+IEK +G +L EF +E +V L+ V +++++++ + G
Sbjct: 357 KIKKIEKHLGHELEEFHVQEADVNKLVGEVFASRKMAKLHMASPGG 402
>gi|345315878|ref|XP_001517019.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Ornithorhynchus anatinus]
Length = 264
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 204/264 (77%)
Query: 139 TPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATM 198
TPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR R+T+LFSATM
Sbjct: 1 TPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATM 60
Query: 199 TKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMV 258
TKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD YLVY+L E++ +S M+
Sbjct: 61 TKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYLFIPSKFKDSYLVYLLNELAGNSFMI 120
Query: 259 FTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLD 318
F TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA +IL+ TDVASRGLD
Sbjct: 121 FCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLATDVASRGLD 180
Query: 319 IPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 378
IP VD+V+N+DIPT+SK + R R G+ +Y++E + +IE LIGKKLP
Sbjct: 181 IPHVDVVVNFDIPTHSKVRVRGRSRPTERRRGGLPGRPPPRYDVELFQRIEHLIGKKLPA 240
Query: 379 FPAEEEEVLLLLERVTEAKRISQM 402
FP +EEEV++L ERV EA+R ++M
Sbjct: 241 FPTQEEEVMMLTERVAEAQRFARM 264
>gi|357618886|gb|EHJ71689.1| hypothetical protein KGM_12880 [Danaus plexippus]
Length = 533
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 260/414 (62%), Gaps = 12/414 (2%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K F+ELG++ L+ +G KTP+ IQ IP+ L G+D IG A+TGSGKT AFALPIL
Sbjct: 7 KDFEELGVKRWLINQLITLGIKTPTPIQKGCIPNILSGQDCIGAAKTGSGKTFAFALPIL 66
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q L E FA VL+PT ELA QI++QF LG + LR ++ GG D ++++L
Sbjct: 67 QNLAEDPY------GIFALVLTPTHELAYQIADQFLILGQPLKLRVCIVTGGSDQLEESL 120
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L KRPHIVVA PGRL DH++ FSL +KYLVLDEADRL ++ F L+ I +P+
Sbjct: 121 KLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRLFSESFTGDLETIFEALPQ 180
Query: 188 MRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKYS-TVDTLKQQYRFVPAKYKDCYLV 245
RQ LFSAT+T+ VK+ + L K+ + + + TV TL Q+Y PA +D YLV
Sbjct: 181 KRQNLLFSATITEDVKESKVLSLNKDNLSTWCDTDTTLTVSTLDQRYVVCPAYARDVYLV 240
Query: 246 YILTE----VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
L + +S +VFT T ++L++ML ++G + + G M Q +R+ AL +F++
Sbjct: 241 QTLRKYREGAPSSHVIVFTDTKKECQVLSMMLADIGMDNVCLHGFMRQKERVSALAQFRS 300
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
LI T+VA+RGLDIPSVD+V+N+ +P K+YIHRVGRTARAGR+G+AIS++ Y+
Sbjct: 301 NLKCTLIATNVAARGLDIPSVDLVVNHKLPLEPKEYIHRVGRTARAGRSGMAISIITPYD 360
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+ +IE I KL E+ +++E + + V+ ++R + I D+ + R++
Sbjct: 361 ILRLGEIEDEIRTKLSEYKIDDDEAVRVFTTVSVSRRTQEAAIDDTEFETRQRN 414
>gi|336386445|gb|EGO27591.1| hypothetical protein SERLADRAFT_360268 [Serpula lacrymans var.
lacrymans S7.9]
Length = 520
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/454 (41%), Positives = 264/454 (58%), Gaps = 44/454 (9%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +L + L+ A + +TP++IQ IP L G+D IG A+TGSGKT AFALPILQ
Sbjct: 79 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLLSGRDCIGNAKTGSGKTIAFALPILQ 138
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E FA VL+PTRELA QIS+QF LG+G+S+R AV+VGG+DMM Q L
Sbjct: 139 KLSEDPY------GIFALVLTPTRELAFQISDQFAVLGAGLSIRTAVIVGGMDMMTQALE 192
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L RPH+VVATPGR++DHL ++ G +SL +K+LVLDEADRLL F L + +V+P+
Sbjct: 193 LDNRPHVVVATPGRIVDHLRSSSGEWSLSRIKFLVLDEADRLLTPTFSPELSYLFDVLPK 252
Query: 188 MRQTYLFSATMTKKVKKL----QRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
RQT LF+AT+T + KL R + P + TV TL Q + VP+ ++ Y
Sbjct: 253 ERQTCLFTATLTPSIDKLAEVPPRPGKQKPFIHRMNANIETVVTLNQNFVLVPSHVRETY 312
Query: 244 LVYIL---TEVSAS-----------------STMVFTRTCDATRLLALMLRNLGQRAIPI 283
L ++L E++AS T++F L +L+ L R+ +
Sbjct: 313 LYHLLCNPPELAASLRRIPPDTEKRELVQPPPTIIFCTKPRTAAYLTSLLKTLSIRSTAL 372
Query: 284 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 343
++Q +RL +L+ F++ +L+ TDV +RGLDI V MVIN+D+P ++Y HRVGR
Sbjct: 373 HSRLTQRERLTSLSLFRSSVIPVLVSTDVGARGLDIEDVAMVINWDLPNEPEEYTHRVGR 432
Query: 344 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 403
TARAG+ G+AIS V + + E L+IE IG KL E E +VL L V+ AKR++ M
Sbjct: 433 TARAGKAGIAISFVTEKDEERVLKIESRIGTKLAEMILPEGKVLEKLTSVSTAKRLANME 492
Query: 404 IKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 437
+ DS D G++ I+ K KR+
Sbjct: 493 LHDS-------------DFGKREEIHNIKKQKRR 513
>gi|440803375|gb|ELR24281.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 335
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/249 (65%), Positives = 195/249 (78%), Gaps = 10/249 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LG+ E+ ++C +GW PS+IQ E IP A++GKD+IGLAQTGSGKTGAFA+PILQ
Sbjct: 90 TFADLGVIPEICDSCTMLGWSKPSEIQKETIPLAIQGKDIIGLAQTGSGKTGAFAIPILQ 149
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALL Q+ P FA VLSPTRELAIQI+EQFEALGS I R V+VGGVD+M+Q++A
Sbjct: 150 ALL-----QKPQP-LFAVVLSPTRELAIQIAEQFEALGSVIRARSVVIVGGVDVMEQSIA 203
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PHI+ ATPGRL+ HL NTKGFSL +LKYLVLDEADRLLN D+E+ +D+I P
Sbjct: 204 LAKKPHIICATPGRLLFHLQNTKGFSLKSLKYLVLDEADRLLNMDYEEEIDQIW---PE- 259
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KVKKL+RA L NPVKI +SKYSTVDTL Q Y FVP K+KDCYLVY+L
Sbjct: 260 RHTYLFSATMTSKVKKLERASLANPVKISVSSKYSTVDTLLQNYVFVPEKFKDCYLVYLL 319
Query: 249 TEVSASSTM 257
E +S +
Sbjct: 320 NEFVGNSII 328
>gi|351713807|gb|EHB16726.1| Putative ATP-dependent RNA helicase DDX49 [Heterocephalus glaber]
Length = 453
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/410 (44%), Positives = 246/410 (60%), Gaps = 23/410 (5%)
Query: 44 EGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 103
EG+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 18 EGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFR 71
Query: 104 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 163
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F + + +LV+
Sbjct: 72 VLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFHIKKIHFLVM 131
Query: 164 DEADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 220
DEADRLL DF L+ IL +P RQT LFSAT+T +++LQ P A +
Sbjct: 132 DEADRLLEQGCTDFTADLETILAAVPAHRQTLLFSATLTDTLRELQGLATNQPFFWAAQA 191
Query: 221 KYSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNL 276
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 192 PVSTVEQLDQRYLLVPEKVKDAYLVHLVQSFQDEHEDWSIIIFTNTCKTCQILCMMLRRF 251
Query: 277 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 336
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K
Sbjct: 252 NFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKI 311
Query: 337 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
YIHRVGRTARAGR G AI+LV QY++ IE+ I K+L EF +E EVL +L +V
Sbjct: 312 YIHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKQLEEFSVKEAEVLQILTQVNVV 371
Query: 397 KRISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKR 436
+R ++ + K NKR++ +G D D R+ + K K R
Sbjct: 372 RRECEIKLEAAHFDEKKEINKRKQLILEGKDPDLQARRRAELAKIKQRNR 421
>gi|340502636|gb|EGR29308.1| hypothetical protein IMG5_158860 [Ichthyophthirius multifiliis]
Length = 473
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 215/308 (69%), Gaps = 19/308 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE + TFK LG+ DEL+EAC + + P+ IQ E++P+ L+G+D+I LA+TGSGKT AF
Sbjct: 50 EELKNDTFKSLGVCDELLEACNRLKYINPTAIQIESLPYTLKGQDIIALAETGSGKTMAF 109
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPT-------RELAIQISEQFEALGSGISLRCAV 115
ALP++Q+LL+ P F C T ++L I ++LG G+SL+ V
Sbjct: 110 ALPVIQSLLD-------APIKFLCAYIVTYKSNYVCKQLNI-----LKSLGVGVSLKTTV 157
Query: 116 LVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFE 175
++GG++ Q AL K+PHIVV TPGR++ HL NTK F++ LKYL+LDEAD+LLN DFE
Sbjct: 158 IIGGLEPQIQVQALQKKPHIVVGTPGRILYHLQNTKVFNIKQLKYLILDEADKLLNMDFE 217
Query: 176 KSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFV 235
K +++IL+V+P+ R T+LFSATMT KV KL RA L+NPVKIE + KY TV TL Q Y F+
Sbjct: 218 KDINKILDVLPKKRNTFLFSATMTNKVNKLTRASLQNPVKIEVSLKYQTVITLVQLYSFI 277
Query: 236 PAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
P+KYKDCYLVY L E + ++++F TC L L+L+NLG A+ I+G MSQ KR GA
Sbjct: 278 PSKYKDCYLVYTLNEFAGQTSIIFVTTCLNAIKLTLILKNLGFSAVTINGQMSQVKRFGA 337
Query: 296 LNKFKAGE 303
+NKFKAGE
Sbjct: 338 INKFKAGE 345
>gi|401827655|ref|XP_003888120.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999320|gb|AFM99139.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 399
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/404 (41%), Positives = 245/404 (60%), Gaps = 7/404 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL + L+E CE G P++IQ + IP + G D+I ++QTGSGKT AF LPI+
Sbjct: 3 FDELRVDKSLIEVCEENGIAEPTEIQEQVIPAIVGGSDIIAVSQTGSGKTLAFVLPIVSC 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL ++N+ +F+ V++PTREL+ QI+E F ++ LR +LVGG Q L
Sbjct: 63 LL--SKNR----SFYCLVIAPTRELSSQIAECF-SMFENTGLRVCLLVGGTSFNVQANQL 115
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K PH++V TPGR+ +H+ TK F + ++ LVLDEADR DF + L+ I+ + R
Sbjct: 116 SKHPHVIVGTPGRIAEHILKTKSFKIERVRKLVLDEADRFFEQDFVEDLETIIRSLREKR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LF+ATM+ ++ KL + L++P I KY TV TLK+ Y F+ K+K+ LV +L
Sbjct: 176 QTLLFTATMSDEISKLSNSILRSPKTIRVVEKYETVPTLKEYYLFIAMKWKNSALVELLE 235
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S +VF C R+++L L LG + + G + Q KR + FK + +IL+C
Sbjct: 236 MNPGVSVIVFVSMCVTARVMSLALSRLGFHSEALHGELIQEKREETMRMFKENKFSILVC 295
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDV SRGLDI VD+VIN+D+P + KDY+HRVGRTARAGR+G AI+LV QY++E ++E
Sbjct: 296 TDVGSRGLDISHVDLVINFDVPKSGKDYVHRVGRTARAGRSGTAITLVTQYDIEQLQRVE 355
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
+ K L EF +++ ++ EA +Q +K+ RR
Sbjct: 356 FALKKSLEEFGHIKKDFKSTYRKIEEAIESAQEILKEEKRSNRR 399
>gi|308159475|gb|EFO62004.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 449
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 253/419 (60%), Gaps = 23/419 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGK--DLIGLAQTGSGKTGAFALPIL 67
F++LG+ EL++A E +GW P+ IQ E + K D++G+A+TGSGKTGAFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWLEPTAIQKEMLAVVSHNKACDVVGVAETGSGKTGAFAIPAL 62
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q LLE N V VLSPTRELA+Q F LG G LR +++GGVD+MQQ
Sbjct: 63 QDLLERGNN---VKGVHTVVLSPTRELAVQTFSVFRDLGKGFGLRTGLVIGGVDLMQQRK 119
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++PH+++ TPGRL+DHL T+GFSL +L++L++DEAD++L D +++ + P+
Sbjct: 120 TLAQQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKMLEQDMGRAVLSLTKDCPQ 179
Query: 188 MRQTYLFSATMTKKVKKLQRAC--------LKNPVKIEAA--------SKYSTVDT--LK 229
R+T+LFSAT V+ LQ C ++ V +AA ++ + VD L
Sbjct: 180 RRRTFLFSATFPSAVQALQNECTDRSRLVHIRVGVLTKAAPDVDGSTNTQLAVVDNEFLS 239
Query: 230 QQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQ 289
+ +P K LV +L + +VF LALML LG + G MSQ
Sbjct: 240 HKMVVLPHSEKQLGLVVLLNNHATCQIIVFATKISTVTKLALMLTTLGFEVGVVHGSMSQ 299
Query: 290 SKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR 349
KRL LN+F+ GE IL+ +DVA RG+DIP++D+VINYD+P S+DY+HRVGRTARAGR
Sbjct: 300 DKRLEELNRFRQGEHKILLASDVAGRGIDIPNIDLVINYDLPVASRDYVHRVGRTARAGR 359
Query: 350 TGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
G A+++V QY++ + +IE ++G K+ + + E L +V EA R ++ + + G
Sbjct: 360 RGTALTVVTQYDVVNFKRIEAMLGIKMEPYTPDFSEAAGLRSQVEEAIRFAERSARSIG 418
>gi|390478768|ref|XP_003735574.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX49 [Callithrix jacchus]
Length = 480
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 189/445 (42%), Positives = 256/445 (57%), Gaps = 27/445 (6%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAQLGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGLDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSTLFSIKKIRFLVMDEADRLLEQGCTDFTVDLETILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSVIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASR + + P+ + RVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRX----AAPLSPAQGTPSLPRSTSRRVGRTARAGRQGQAITLVTQYDI 353
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 354 HLVHAIEEQIQKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 413
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D R+ + K K R+
Sbjct: 414 LEGKDPDLXAKRKAELAKIKQKNRR 438
>gi|146161285|ref|XP_977099.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146146797|gb|EAR86377.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 440
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 251/433 (57%), Gaps = 14/433 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL + + C+ VG++ P+KIQ AIP L + +I A+TGSGKT FA PILQ
Sbjct: 4 FAKLGLDSWIQKTCDKVGYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQD 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + FA VL+ RELA+QISEQF GS ++LR + LVGGVD +Q L
Sbjct: 64 L------AKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVDFNKQLSEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
+ PHIVV TPGR +D + + + +KYLVLDEADRL D + + IL IP+
Sbjct: 118 ERIPHIVVGTPGRTLDMIDKSPVLKEYIENVKYLVLDEADRLFEDSIIEDIQSILEFIPQ 177
Query: 188 MRQTYLFSATMTKKV--KKLQRACLKNPVKIE---AASKYSTVDTLKQQYRFVPAKYKDC 242
+Q L +AT+ KKL LK VK E + V TLKQ++ VP KD
Sbjct: 178 EKQIILATATINDDFNDKKLNE-ILKTNVKFERFCVNQQKKVVQTLKQKFVLVPEMVKDQ 236
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
+ +L + S ++F C + +L L + + + Q +R+ L FK+
Sbjct: 237 NFINLLNKFKGISMIIFVNKCRTCHFINALLNQLEFSSTSLHSGLKQGQRISHLKTFKSQ 296
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
NIL+ TDVASRGLDIP+VD+VINYDIP NS DYIHRVGRTAR G+ G+AIS++ QY++
Sbjct: 297 AANILVATDVASRGLDIPTVDLVINYDIPKNSDDYIHRVGRTARKGKRGLAISIMTQYDV 356
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDI 422
+ L IEK IG+KL E +EEE L + +V +AK+ ++ + + G+ ++D
Sbjct: 357 QLILNIEKNIGEKLEELKVDEEEALEIAPKVNKAKKFVKIKMSEDGSSENFDKQEQDKKS 416
Query: 423 GRQFGINKKKLSK 435
++F +KKL K
Sbjct: 417 YKEFIREQKKLKK 429
>gi|344230065|gb|EGV61950.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 186/437 (42%), Positives = 264/437 (60%), Gaps = 25/437 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELG+ D L E+ ++ P+ IQA IP L+GKD IG A+TGSGKT AF LP+L
Sbjct: 3 TFHELGVADWLCESLNSMKIHKPTSIQAACIPEVLKGKDCIGGAKTGSGKTIAFGLPMLH 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E + VL+PTRELA+QI+EQF A+GS +++R V+VGG DM++Q LA
Sbjct: 63 KWSE------DPFGVYGLVLTPTRELALQIAEQFSAVGSSMNIRVKVIVGGEDMIEQALA 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
+ K+PH ++ATPGRL DH+ N+ ++ L K+LVLDEADRLL++ F K LD I NV+
Sbjct: 117 IQKKPHFIIATPGRLADHILNSGEDTINGLRRIKFLVLDEADRLLSNSFGKDLDRIFNVL 176
Query: 186 P--RMRQTYLFSATMTKKVKKLQRACLKNPV-KIEAASKYSTVDTLKQQYRFVPAKYKDC 242
P + RQT LF+AT+T V+ L+ K V +IE+ K+ TL Y FVP+ K+
Sbjct: 177 PDSKKRQTLLFTATVTDAVRSLKDKNDKVFVHEIESVDKFIIPSTLSLYYIFVPSYVKEA 236
Query: 243 YLVYILT-EVSASST-MVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
YL +L ++ ++F +L MLR L R + M Q++R+ ++ +FK
Sbjct: 237 YLNEVLNLDIYKDKVGIIFVNRTKTAEMLRRMLRKLEFRVTSLHSEMPQTERVNSIQRFK 296
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A ILI TDVASRGLDIP+V+ VIN+DIP + D++HRVGRTARAG+ G +I++V +
Sbjct: 297 ANAAKILIATDVASRGLDIPNVEFVINFDIPADPDDFVHRVGRTARAGKKGDSITVVGEK 356
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
++E L IE+ I KL LLE +++ K I S KR E++
Sbjct: 357 DIERVLAIEERINDKLK-----------LLEDISDNKLIKDSLKSTSDAKRESLIEMENE 405
Query: 421 DIGRQFGINKKKLSKRK 437
+ G + INK+K +R+
Sbjct: 406 NFGERRQINKRKHIERE 422
>gi|225710224|gb|ACO10958.1| Probable ATP-dependent RNA helicase DDX49 [Caligus rogercresseyi]
Length = 454
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/395 (43%), Positives = 254/395 (64%), Gaps = 15/395 (3%)
Query: 13 LGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE 72
LGL+ L + CE +G K+PS +Q E +P L+G++ IG+A+TGSGKT AFALPIL AL E
Sbjct: 4 LGLKPWLSKQCEAIGLKSPSPVQRETVPKILDGQNGIGIAKTGSGKTAAFALPILDALSE 63
Query: 73 IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKR 132
+A VL+PTRELA QI++ F+ LG ++++ ++++GG DM+ Q L
Sbjct: 64 DPY------GIYALVLTPTRELAYQIADTFKILGKPLNVKVSIIIGGRDMVLQGSELASS 117
Query: 133 PHIVVATPGRLMDHL-TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQT 191
PHIV+ATPGRL DHL T+++ L +K+LV+DEADRLL F++++ I IPR RQT
Sbjct: 118 PHIVIATPGRLADHLNTHSQSSPLKKIKFLVIDEADRLLEGGFDEAIGRIFASIPRSRQT 177
Query: 192 YLFSATMTKKVKKLQRACLKNPV----KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
LF+AT ++ +K+L A + + E + TV+TL Q Y PA ++D YL+ +
Sbjct: 178 LLFTATHSESLKELIVANSEKEHFYYREGEDDASGLTVNTLDQHYVLTPADFRDAYLIGV 237
Query: 248 LTEVSA----SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L ++ +S ++F RTC ++L+L L LG + + Q +RL AL++F++
Sbjct: 238 LMKIQKESPNASFIIFARTCKIAQILSLTLGKLGFSNVALHSMKPQRERLEALSRFRSHL 297
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
ILI TDVASRGLDIP V+ VIN++IPT + +Y+HRVGRTARAGR G AISL+ +++
Sbjct: 298 AKILIATDVASRGLDIPHVEYVINHNIPTEATEYVHRVGRTARAGRRGTAISLLTPHDVL 357
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
IE+LIG KL E+ + + + ++ +V +R
Sbjct: 358 LLESIEELIGSKLSEYSVDTKNIFEIVVQVNVTRR 392
>gi|255070425|ref|XP_002507294.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226522569|gb|ACO68552.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 484
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 247/414 (59%), Gaps = 13/414 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E E F+ LGL L E ++G T + +Q IP L G+D+IG+AQTG+GKT AF
Sbjct: 63 EVVEQTGFRSLGLNSWLCENITSMGIATATPVQRGCIPAILAGRDVIGVAQTGTGKTAAF 122
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ L R F L+PTRELA QISEQF A +G++LRC + GG ++
Sbjct: 123 ALPILQIL------GREPYGIFCLCLTPTRELASQISEQFIAFSAGMTLRCETVFGGENI 176
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDE 180
Q AL RPHI VATPGRLMDH + + ++ LVLDEADRLL+ FE L
Sbjct: 177 RTQAKALMLRPHIAVATPGRLMDHFLHCSAVAKCFENVRCLVLDEADRLLDPGFEAELQA 236
Query: 181 ILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
I++ +P RQT +FSAT+TK + +Q L + EA K++Y F+ +
Sbjct: 237 IMHNLPSANRQTLMFSATITKSISAVQELALGKALLFEALKDTQLAGRCKEEYCFIAPRV 296
Query: 240 KDCYLVYILTEV---SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YLV+IL S +VF T ++L +L LG + + Q++R +L
Sbjct: 297 KEVYLVHILKRAPTWGTRSMIVFAGTVRKCQMLKEILSVLGINCVALHAAKKQARRHASL 356
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++FK+GE I+I TD+ASRGLDIP+VDMV+NYD+P +DYIHR+GRTARAGR G AI+L
Sbjct: 357 SRFKSGEIQIMIATDIASRGLDIPTVDMVVNYDVPLIPRDYIHRIGRTARAGRVGRAITL 416
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL-LERVTEAKRISQMTIKDSGN 409
V Q+++ QIE+L +KL E EE +L + +V A+RI+ + + +G
Sbjct: 417 VTQHDISLVHQIEQLTCRKLVELSKLSEEAILKDMAQVFAARRIANLNMGAAGG 470
>gi|159117282|ref|XP_001708861.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157436975|gb|EDO81187.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 450
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/419 (41%), Positives = 251/419 (59%), Gaps = 23/419 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGK--DLIGLAQTGSGKTGAFALPIL 67
F++LG+ EL++A E +GW P+ IQ E + K D++G+A+TGSGKTGAFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWLEPTAIQKEMLTVVSHNKACDVVGVAETGSGKTGAFAIPAL 62
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q LLE N V VLSPTRELA+Q F LG LR +++GGVD+MQQ
Sbjct: 63 QDLLERGTN---VKGVHTVVLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRK 119
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++PH+++ TPGRL+DHL T+GFSL +L++L++DEAD++L D +++ + P+
Sbjct: 120 TLAQQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKMLEQDMGRAVLNLAKDCPQ 179
Query: 188 MRQTYLFSATMTKKVKKLQRAC--------LKNPVKIEAAS--------KYSTVDT--LK 229
R+T+LFSAT V+ LQ C ++ V +AAS + + VD L
Sbjct: 180 RRRTFLFSATFPSAVQALQNECTDRSRLVHIQVGVLTKAASDVDGSTNTQLAVVDNELLS 239
Query: 230 QQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQ 289
+ +P K LV +L +A MVF LALML LG + G M Q
Sbjct: 240 HKMVVLPHAEKQLGLVVLLNNHAACQIMVFATKISTVTKLALMLTTLGFEVGVVHGSMGQ 299
Query: 290 SKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR 349
KRL LN+F+ GE IL+ +DVA RG+DIP+VD+VINYD+P S+DY+HR GRTARAGR
Sbjct: 300 DKRLEELNRFRQGEHKILLASDVAGRGIDIPNVDLVINYDLPVASRDYVHRAGRTARAGR 359
Query: 350 TGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
G A+++V QY++ + +IE ++G ++ + + E L +V EA R ++ T + G
Sbjct: 360 RGTALTIVTQYDVVNFKRIEAMLGIRMEPYTPDFSEAAGLRSQVEEAIRHAERTARSIG 418
>gi|115532546|ref|NP_001040788.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
gi|351065689|emb|CCD61679.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
Length = 488
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/383 (44%), Positives = 234/383 (61%), Gaps = 19/383 (4%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K F +LG+ + + + + KT + +QA IP LEG D++G A+TG+GKT AFA+PIL
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 68 QALLEIAENQRTVPAF--FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
Q L +V + +A +L+PTRELA QI+EQF ALG I+L+C+V+VGG ++ Q
Sbjct: 149 QKL--------SVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQ 200
Query: 126 TLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
L +RPH+VVATPGRL D + +T +++ VLDEADR+L + L I
Sbjct: 201 ARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIF 260
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK--YSTVDTLKQQYRFVPAKYK 240
I RQT L SAT+T + L R + P E K STVD L+Q+Y P K
Sbjct: 261 ESISEKRQTLLLSATITNNINMLHRVSTRKPYFFEDKGKDDESTVDRLEQKYVVCPVAVK 320
Query: 241 DCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
D YLVY++ S SS M+F +TC + LA M LG R + + Q +RL AL
Sbjct: 321 DAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAAL 380
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
+ F++ ++ICTDVASRGLDIP VD+V+N+++P K YIHRVGR+ARAGR G A+S
Sbjct: 381 SAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSF 440
Query: 357 VNQYELEWYLQIEKLIGKKLPEF 379
V QY++E +E++IGKKL E
Sbjct: 441 VTQYDVELLQAVEQVIGKKLDEL 463
>gi|308800454|ref|XP_003075008.1| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
gi|119358858|emb|CAL52279.2| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
Length = 419
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/406 (43%), Positives = 244/406 (60%), Gaps = 13/406 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL + +++ + V +++PS +Q+ IP L GKD+IG+A TGSGKT AFALPI+
Sbjct: 3 TFDELGLCNVVLKILKRVHFRSPSDVQSTCIPQILAGKDVIGIANTGSGKTAAFALPIVD 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L R FA LSPTRELA QI++QF G+G L C V+ GG D++QQ A
Sbjct: 63 ML------SRDPYGIFALCLSPTRELANQIADQFTVFGAGTGLNCMVITGGEDLIQQATA 116
Query: 129 LGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RP+IVVATPGRL +H +NT + LK L+LDEADRLL+ F L +++ +
Sbjct: 117 LSRRPNIVVATPGRLFEHFMHSSNTVQY-FSKLKCLILDEADRLLDSSFAAELKYLMSNL 175
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT +FSAT+TK V LQ E S T Q Y F+P + KD LV
Sbjct: 176 PQQRQTLMFSATITKSVTALQSMLGDAVFYYEDKSVKKTAVRCSQSYCFMPERIKDVNLV 235
Query: 246 YILTE---VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E V A T++FT T LL+ ML LG + + Q +RL +L FK G
Sbjct: 236 KLVRELALVEAKRTIIFTATIQKCELLSQMLTTLGIPSSSLHAAKKQKERLNSLGVFKNG 295
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
IL+ TDVA+RGLD+PSVDM++NYD+PT+ + YIHR+GRTAR +G A++ V Q+++
Sbjct: 296 TVQILVATDVAARGLDLPSVDMILNYDVPTDVRQYIHRIGRTARFEASGKAVTFVTQFDI 355
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
IEK IG++L + E L+ V A+R+++M + G
Sbjct: 356 LKLKHIEKTIGQQLDSYELEGSSGAELVGEVFAARRVAKMRMASPG 401
>gi|225710312|gb|ACO11002.1| Probable ATP-dependent RNA helicase DDX49 [Caligus rogercresseyi]
Length = 454
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 170/395 (43%), Positives = 254/395 (64%), Gaps = 15/395 (3%)
Query: 13 LGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLE 72
LGL+ L + CE +G K+P+ +Q E +P L+G++ IG+A+TGSGKT AFALPIL AL E
Sbjct: 4 LGLKPWLSKQCEAIGLKSPAPVQRETVPKILDGQNGIGIAKTGSGKTAAFALPILDALSE 63
Query: 73 IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKR 132
+A VL+PTRELA QI++ F+ LG ++++ ++++GG DM+ Q L
Sbjct: 64 DPY------GIYALVLTPTRELAYQIADTFKILGKPLNVKVSIIIGGRDMVLQGSELASS 117
Query: 133 PHIVVATPGRLMDHL-TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQT 191
PHIV+ATPGRL DHL T+++ L +K+LV+DEADRLL F++++ I IPR RQT
Sbjct: 118 PHIVIATPGRLADHLNTHSQSSPLKKIKFLVIDEADRLLEGGFDEAIGRIFASIPRSRQT 177
Query: 192 YLFSATMTKKVKKLQRACLKNPV----KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
LF+AT ++ +K+L A + + E + TV+TL Q Y PA ++D YL+ +
Sbjct: 178 LLFTATHSESLKELIVANSEKEHFYYREGEDDASGLTVNTLDQHYVLTPADFRDAYLIGV 237
Query: 248 LTEVSA----SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L ++ +S ++F RTC ++L+L L LG + + Q +RL AL++F++
Sbjct: 238 LMKIQKESPNASFIIFARTCKIAQILSLTLGKLGFSNVALHSMKPQRERLEALSRFRSHL 297
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
ILI TDVASRGLDIP V+ VIN++IPT + +Y+HRVGRTARAGR G AISL+ +++
Sbjct: 298 AKILIATDVASRGLDIPHVEYVINHNIPTEATEYVHRVGRTARAGRRGTAISLLTPHDVL 357
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 398
IE+LIG KL E+ + + + ++ +V +R
Sbjct: 358 LLESIEELIGSKLSEYSVDTKNISEIVVQVNVTRR 392
>gi|19113586|ref|NP_596794.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654494|sp|Q9HGM5.1|DBP8_SCHPO RecName: Full=ATP-dependent RNA helicase dbp8
gi|9929273|emb|CAC05248.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe]
Length = 453
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 273/448 (60%), Gaps = 22/448 (4%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E K+F +LG+ L++ + + P+ IQ I LEG++ IG A+TGSGKT AFA
Sbjct: 3 EHTRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFA 62
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPI++ + FA +L+PTRELAIQI EQF ALG+ ++L+ A++VGG+DM+
Sbjct: 63 LPIIEKW------SKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMI 116
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSLD 179
+Q++ L KRPH+VVATPGRL D L + G L +K+LV+DEADRLL+ F LD
Sbjct: 117 RQSIDLSKRPHVVVATPGRLAD-LIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLD 175
Query: 180 EILNVIPRM--RQTYLFSATMTKKVKKLQRACLKN---PVKIEAA--SKYSTVDTLKQQY 232
+ +V+P RQT LF+AT+T +++L+ KN P+ + S TL+Q Y
Sbjct: 176 DCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSY 235
Query: 233 RFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
FV ++ ++ YLV++LT E + S ++F L+ +LR L R + M Q
Sbjct: 236 IFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQR 295
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
+R+ +L +F+A IL+ TDVASRGLDIPSV +VIN+D+P + DYIHRVGRTARAGR+
Sbjct: 296 ERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRS 355
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKDSGN 409
G +IS+V + +++ IE +G KL E+ E ++L ++ VT+AKR + + + D G
Sbjct: 356 GESISIVTERDVDLVHAIEDRVGTKLSEYEHVSENKMLEYIKEVTDAKRQASLEMIDRGF 415
Query: 410 KRRRKGGDEDDDIGRQFGINKKKLSKRK 437
RR+ +E + NK K S RK
Sbjct: 416 GERRQKRNEKRLMANGIS-NKLKNSGRK 442
>gi|294660132|ref|XP_462573.2| DEHA2G23782p [Debaryomyces hansenii CBS767]
gi|218512022|sp|Q6BGU8.2|DBP8_DEBHA RecName: Full=ATP-dependent RNA helicase DBP8
gi|199434486|emb|CAG91086.2| DEHA2G23782p [Debaryomyces hansenii CBS767]
Length = 441
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 269/442 (60%), Gaps = 40/442 (9%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ELG+ L EA ++ TP+ IQ+ IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E + VL+PTRELA+QI+EQF ALGS ++++ +V+VGG D+++Q L
Sbjct: 62 QWSEDPS------GIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPH VVATPGRL DH+ N+ + L +KYL+LDEADRLL++ F L+ N++
Sbjct: 116 LQRRPHFVVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRLLSNSFGGDLERCFNIL 175
Query: 186 PRM--RQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ + K PV ++E K + TL +Y FVP+
Sbjct: 176 PSTDKRQTLLFTATVTDAVRALKDRPVPKGKLPVFIHEVETVDKVAIPSTLSVKYVFVPS 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + S S +++FT LL LR L R + M Q++R +
Sbjct: 236 YVKEAYLHSILNLPQYSDSLSIIFTNRTATAELLRRTLRKLEFRVASLHSEMPQTERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKAG ILI TDVASRGLDIP+V++V+NYDIP ++ D+IHRVGRTARAGR G AIS
Sbjct: 296 LHRFKAGAAKILIATDVASRGLDIPTVELVVNYDIPADADDFIHRVGRTARAGRKGDAIS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK----R 411
+V + +++ L IE+ I KK+ L+E +++ K IKDS NK +
Sbjct: 356 IVAEKDVDRILAIEERINKKMD-----------LIEDISDNK-----VIKDSLNKTSVAK 399
Query: 412 RRKGGDED-DDIGRQFGINKKK 432
R D D ++ G + INK K
Sbjct: 400 REAFMDMDRENFGEKRKINKSK 421
>gi|254568340|ref|XP_002491280.1| Putative ATP-dependent RNA helicase of the DEAD-box family
[Komagataella pastoris GS115]
gi|238031077|emb|CAY69000.1| Putative ATP-dependent RNA helicase of the DEAD-box family
[Komagataella pastoris GS115]
gi|328352202|emb|CCA38601.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 434
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/441 (43%), Positives = 267/441 (60%), Gaps = 30/441 (6%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ELG+ L E+ + + TPSKIQ IP L G D IG A+TGSGKT AFA P+L
Sbjct: 4 FEELGVSKWLCESLDAMKIYTPSKIQEATIPKILAGYDCIGGAKTGSGKTIAFAAPMLT- 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+ +E+ V F +L+PTRELA+QI+EQ+ ALG+ ++++ +V++GG D++QQ L L
Sbjct: 63 --KWSEDPYGV---FGLILTPTRELALQIAEQYAALGASMNIKVSVILGGGDIVQQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVIP 186
+RPH VVATPGRL DH+ ++ ++G L K+LVLDEADRLL++ F L+ V+P
Sbjct: 118 QRRPHFVVATPGRLADHILSSGEETIGGLRKIKFLVLDEADRLLSNSFGSDLERCFKVLP 177
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T +V+ L+ + K PV ++E+ K + TL Y F+P+
Sbjct: 178 PPEKRQTLLFTATVTDEVRALKEKPVPEGKLPVFVHEVESVDKVAIPATLTTNYLFIPSY 237
Query: 239 YKDCYL--VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL V L E + S+ +VF LL LRNL R + M Q +R+ +L
Sbjct: 238 VKEAYLNAVLALEENADSTVIVFVNRTQTAELLRRTLRNLEFRVASLHSEMPQIERINSL 297
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++FKAG ILI TDVASRGLDIPSV++V+NYD+P + DYIHRVGRTARAGR G ++S
Sbjct: 298 HRFKAGAARILIATDVASRGLDIPSVELVVNYDMPADPDDYIHRVGRTARAGRKGESLSF 357
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
V + +++ L IE+ I KK+ ++ E VT+ K I K KR
Sbjct: 358 VTEQDVKRVLAIEERINKKMDKY-----------ELVTDNKVIETSLHKTGAAKREALMA 406
Query: 417 DEDDDIGRQFGINKKKLSKRK 437
E + G + NK K +KRK
Sbjct: 407 MEREGFGEKRKNNKIKNAKRK 427
>gi|253745237|gb|EET01285.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 450
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 248/419 (59%), Gaps = 23/419 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGK--DLIGLAQTGSGKTGAFALPIL 67
F++LG+ EL++A E +GW P+ IQ E + K D++G+A+TGSGKTGAFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWVEPTAIQKEMLTVISTNKICDVVGVAETGSGKTGAFAIPAL 62
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q LLE N V VLSPTRELA+Q F LG LR +++GGVD+MQQ
Sbjct: 63 QDLLERGNN---VKGVHTVVLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRK 119
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++PH ++ TPGRL DHL +T+GFSL ++++L++DEAD++L D +++ ++ P+
Sbjct: 120 ILAQQPHALICTPGRLADHLASTEGFSLKSIRFLIIDEADKMLEQDMGRAVLDLAKACPQ 179
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNP----------------VKIEAASKYSTVDT--LK 229
R+T+LFSAT V+ LQ C V A+++ + VD L
Sbjct: 180 RRRTFLFSATFPSAVQALQNECTDRSRLVHIRVGVLAKDAPEVDGSASTQLAVVDNELLS 239
Query: 230 QQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQ 289
+ +P K LV +L + +VF LALML LG + G M+Q
Sbjct: 240 HKMVVLPHAEKQLGLVVLLNNHATCQIIVFATKISTVTKLALMLTTLGFEVGVVHGSMAQ 299
Query: 290 SKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR 349
KRL LN+F+ GE IL+ +DVA RG+DIP+VD+VINYD+P S+DY+HR GRTARAGR
Sbjct: 300 DKRLEELNRFRQGEHKILLASDVAGRGIDIPNVDLVINYDLPVASRDYVHRAGRTARAGR 359
Query: 350 TGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
G A+++V QY++ + +IE ++G ++ + + E L +V EA R ++ T + G
Sbjct: 360 RGTALTIVTQYDVVNFKRIEAMLGIRMEPYNPDFGEAAGLRPQVEEAIRAAERTARGIG 418
>gi|195455578|ref|XP_002074783.1| GK23245 [Drosophila willistoni]
gi|194170868|gb|EDW85769.1| GK23245 [Drosophila willistoni]
Length = 506
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 251/433 (57%), Gaps = 22/433 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KE +F+ LGLR L + VG K + IQ IP L G+D IG A+TGSGKT AF
Sbjct: 2 ERKEPNSFQALGLRPWLAKQLTKVGLKDATPIQKSCIPAILSGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF+ SL I
Sbjct: 116 MIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDASLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNP-VKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+P+ RQ FSATM +K + N + S+ +TVDTL Q+Y +D
Sbjct: 176 KSLPKARQNLFFSATMKDFIKDSSIFPIANECFEWSEESQVATVDTLDQRYLLCADYDRD 235
Query: 242 CYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
L+ L E S+ M+FT T +LL++ L+NL + + G M Q +R+ A++
Sbjct: 236 MVLIEALRKYRDENPNSNVMIFTNTKKYCQLLSMTLQNLDIENVCLHGFMRQKERVAAIS 295
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FK+ LI TDVA+RGLDIPSV +VIN+ +P K+YIHRVGRTARAGR+G++IS+
Sbjct: 296 RFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRSGMSISIF 355
Query: 358 N-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG------NK 410
+LE IE I KL E P ++ V + +V +R S+M + ++ N
Sbjct: 356 RFPRDLELLGSIEDEINTKLQEHPIDQRMVERIFMQVNVTRRESEMKLDNNDFDERAQNY 415
Query: 411 RRR----KGGDED 419
RR+ +G D D
Sbjct: 416 RRKTWIIEGKDPD 428
>gi|195154715|ref|XP_002018267.1| GL17616 [Drosophila persimilis]
gi|194114063|gb|EDW36106.1| GL17616 [Drosophila persimilis]
Length = 527
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 253/434 (58%), Gaps = 22/434 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR +V+ +G K + IQ IP L GKD IG AQTGSGKT AF
Sbjct: 2 QRKEANPFQSLGLRPWMVKQLTKLGLKGATPIQQNCIPAILSGKDCIGAAQTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+P RQ FSATM +K+ + K+ ++ S +TVDTL Q+Y +D
Sbjct: 176 RCLPSTRQNLFFSATMKDFMKESSIFPISKDCIEWSQDSNVATVDTLDQRYLLCADYDRD 235
Query: 242 CYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
L+ L E S+ M+FT T +LL++ L+++ + + G M Q +R+ AL+
Sbjct: 236 MVLIESLRKYREENENSNVMIFTNTKKYCQLLSMTLKSMDIDNVCLHGFMRQKERVAALS 295
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FK+ LI TDVASRGLDIPSV +VIN+ +P K+YIHRVGRTARAGR G++IS+
Sbjct: 296 RFKSNHIRTLIATDVASRGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGMSISIF 355
Query: 358 N-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG------NK 410
+LE IE I KL E P ++ V + +V +R S+M + ++ N
Sbjct: 356 RFPRDLELLGAIETEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDERAQNY 415
Query: 411 RRR----KGGDEDD 420
RR+ +G D D+
Sbjct: 416 RRKTWIMEGKDPDE 429
>gi|68487950|ref|XP_712192.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|68488947|ref|XP_711718.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|74656119|sp|Q59PR3.1|DBP8_CANAL RecName: Full=ATP-dependent RNA helicase DBP8
gi|46433039|gb|EAK92496.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|46433563|gb|EAK92999.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|238880002|gb|EEQ43640.1| hypothetical protein CAWG_01884 [Candida albicans WO-1]
Length = 440
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 263/437 (60%), Gaps = 30/437 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ L E+ + + TP+ IQ+ IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ +E+ + F +L+PTRELA+QI+EQF ALG+ ++++ AV+VGG D +QQTLA
Sbjct: 62 ---QWSEDPFGI---FGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLA 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
L ++PH V+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L +V+
Sbjct: 116 LQRKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVL 175
Query: 186 PRM--RQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ K PV ++E K + TL+ Y FVP+
Sbjct: 176 PTSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPS 235
Query: 238 KYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + S+ ++F +L MLR L R + M QS+R +
Sbjct: 236 YVKEAYLNSILHLEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKAG ILI TDVASRGLDIP+V++VIN+DIP + D+IHRVGRTARAGR G A+S
Sbjct: 296 LHRFKAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDAVS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++ + +++ IE+ I KK+ LLE V + I + S KR
Sbjct: 356 IIGEKDIDRIQSIEERINKKME-----------LLEDVNDDNVIKESLSATSVAKRESLM 404
Query: 416 GDEDDDIGRQFGINKKK 432
+ ++ G + IN+KK
Sbjct: 405 EMDKENFGERKKINRKK 421
>gi|198458635|ref|XP_001361114.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
gi|198136412|gb|EAL25690.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
Length = 527
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 253/434 (58%), Gaps = 22/434 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR +V+ +G K + IQ IP L GKD IG AQTGSGKT AF
Sbjct: 2 QRKETNPFQSLGLRPWMVKQLTKLGLKGATPIQQNCIPAILSGKDCIGAAQTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+P RQ FSATM +K+ + K+ ++ S +TVDTL Q+Y +D
Sbjct: 176 RCLPSTRQNLFFSATMKDFMKESSIFPISKDCIEWSQDSNVATVDTLDQRYLLCADYDRD 235
Query: 242 CYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
L+ L E S+ M+FT T +LL++ L+++ + + G M Q +R+ AL+
Sbjct: 236 MVLIESLRKYREENENSNVMIFTNTKKYCQLLSMTLKSMDIDNVCLHGFMRQKERVAALS 295
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FK+ LI TDVASRGLDIPSV +VIN+ +P K+YIHRVGRTARAGR G++IS+
Sbjct: 296 RFKSNHIRTLIATDVASRGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGMSISIF 355
Query: 358 N-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG------NK 410
+LE IE I KL E P ++ V + +V +R S+M + ++ N
Sbjct: 356 RFPRDLELLGAIETEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDERAQNY 415
Query: 411 RRR----KGGDEDD 420
RR+ +G D D+
Sbjct: 416 RRKTWIMEGKDPDE 429
>gi|195474915|ref|XP_002089735.1| GE19250 [Drosophila yakuba]
gi|194175836|gb|EDW89447.1| GE19250 [Drosophila yakuba]
Length = 527
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/415 (43%), Positives = 248/415 (59%), Gaps = 20/415 (4%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR LV+ +G K + IQ + IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + R C + S +TVDTL Q+Y
Sbjct: 176 RCLPKTRQNLFFSATMKDFIKESSIFPIARDCF----EWSQDSDVATVDTLDQRYLLCAD 231
Query: 238 KYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D L+ L E ++ M+FT T +LL++ L+N+ + + G M Q +R+
Sbjct: 232 YDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMDIDNVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YIHRVGRTARAGR G++
Sbjct: 292 AALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMS 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
IS+ +LE IE+ I KL E P ++ V + +V +R S+M + ++
Sbjct: 352 ISIFRFPRDLELLGAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNN 406
>gi|195028030|ref|XP_001986885.1| GH21617 [Drosophila grimshawi]
gi|193902885|gb|EDW01752.1| GH21617 [Drosophila grimshawi]
Length = 524
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/446 (42%), Positives = 255/446 (57%), Gaps = 26/446 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F +LGLR L + +G K + IQ IP L GKD IG A+TGSGKT AF
Sbjct: 2 QRKETNAFLQLGLRPWLAKQLTKLGLKGATPIQENCIPAILSGKDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + + CL + S +TVDTL Q+Y
Sbjct: 176 RCLPKSRQNLFFSATMKDFMKESSIFPIAKDCL----EWSQDSDVATVDTLDQRYLLCAD 231
Query: 238 KYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D LV L E S+ M+FT T +LL++ L N+ + + G M Q +R+
Sbjct: 232 YDRDMVLVESLRKYREENENSNVMIFTNTKKYCQLLSMTLANMEIENVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ LI TDVA+RGLDIPSV +VIN+ +P K+YIHRVGRTARAGR G+A
Sbjct: 292 AALSRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGLA 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG---- 408
IS+ +LE IE I KL E P ++ V + +V ++R S+M + ++
Sbjct: 352 ISIFRFPRDLELLGAIEAEINTKLTEHPIDQRMVERIFMQVNVSRRESEMQLDNNDFDER 411
Query: 409 --NKRRRKGGDEDDDIGRQFGINKKK 432
N RR+ E D + + +KK
Sbjct: 412 AQNYRRKTWIMEGKDPDQMEALYRKK 437
>gi|241958758|ref|XP_002422098.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645443|emb|CAX40099.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 440
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 259/437 (59%), Gaps = 30/437 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ L E+ + + TP+ IQ+ IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFNDLGVARWLSESLDAMKIYTPTSIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E F +L+PTRELA+QI+EQF ALG+ ++++ AV+VGG D +QQTLA
Sbjct: 62 RWSEDPF------GIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLA 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
L ++PH V+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L +V+
Sbjct: 116 LQRKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVL 175
Query: 186 P--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ K PV ++E K + TL+ Y FVP+
Sbjct: 176 PPSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPS 235
Query: 238 KYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + S+ ++F +L MLR L R + M QS+R +
Sbjct: 236 YVKEAYLNSILHLEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKAG ILI TDVASRGLDIP+V++VIN+DIP + D+IHRVGRTARAGR G A+S
Sbjct: 296 LHRFKAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDAVS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++ + +++ IE+ I KK+ LLE V + I + S KR
Sbjct: 356 IIGEKDIDRIQSIEERINKKME-----------LLEDVNDDNVIKESLSATSVAKRESLM 404
Query: 416 GDEDDDIGRQFGINKKK 432
+ ++ G + IN+KK
Sbjct: 405 EMDKENFGERKKINRKK 421
>gi|194753610|ref|XP_001959103.1| GF12227 [Drosophila ananassae]
gi|190620401|gb|EDV35925.1| GF12227 [Drosophila ananassae]
Length = 522
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 185/438 (42%), Positives = 255/438 (58%), Gaps = 30/438 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KEV F+ LGLR L + +G K + IQ IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKEVNPFQSLGLRPWLAKQLTKLGLKGATPIQQNCIPAILSGRDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + + CL + S +TV+TL Q+Y
Sbjct: 176 RCLPKTRQNLFFSATMKDFMKESSIFPISKDCL----EWSQDSDVATVETLDQRYLLCAD 231
Query: 238 KYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D L+ L E ++ M+FT T +LL++ L+N+ + + G M Q +R+
Sbjct: 232 YDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMDIDNVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ LI TDVA+RGLDIPSV +VIN+ +P K+YIHRVGRTARAGR G++
Sbjct: 292 AALSRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGMS 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG---- 408
IS+ +LE IE+ I K+ E P ++ V + +V +R S+M + ++
Sbjct: 352 ISIFRFPRDLELLGAIEEEINTKMTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDER 411
Query: 409 --NKRRR----KGGDEDD 420
N RR+ +G D D+
Sbjct: 412 AQNYRRKTWIMEGKDPDE 429
>gi|448103925|ref|XP_004200160.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
gi|359381582|emb|CCE82041.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
Length = 437
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/438 (42%), Positives = 263/438 (60%), Gaps = 32/438 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ L EA ++ TP+ IQ IP L+G D IG A+TGSGKT AFA PIL
Sbjct: 2 SFSDLGVAKWLCEALNSMKIYTPTAIQKACIPKVLKGHDCIGGAKTGSGKTIAFASPILT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E + VL+PTRELA+QI+EQF ALG+ ++++ V+VGG D+++Q L
Sbjct: 62 KWSEDPY------GIYGLVLTPTRELALQIAEQFAALGATMNIKVCVIVGGDDIVKQALE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPHIV+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L+ V+
Sbjct: 116 LQRRPHIVIATPGRLADHILNSGEDTICGLRRVKYLVLDEADRLLSNSFGSDLERCFGVL 175
Query: 186 PR--MRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P+ RQT LF+AT+T V+ L+ + K PV +++ + TL +Y FVP+
Sbjct: 176 PKPENRQTLLFTATITDAVRSLKEKPVPEGKLPVFVNEVDTVENIAIPSTLSIKYLFVPS 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL +LT E ++T++F LL MLR L R + M QS+R+ +
Sbjct: 236 YVKEAYLHNLLTLPEYEKTTTIIFVNRTHTAELLRRMLRKLDFRVASLHSEMPQSERVNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKA ILI TDVASRGLDIP V++V+NYDIP + D+IHRVGRTARAGR G +IS
Sbjct: 296 LHRFKANAARILIATDVASRGLDIPDVNLVVNYDIPADPDDFIHRVGRTARAGRKGDSIS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+V + ++ L IE+ I KK+ + +E VT+ K I + ++K++ +R
Sbjct: 356 IVAEKDVNRILAIEERINKKMEK-----------MEDVTDNKVIKK-SLKETSVAKREAM 403
Query: 416 GDEDDD-IGRQFGINKKK 432
D D D G + NK K
Sbjct: 404 MDMDKDGFGEKRRTNKMK 421
>gi|391330997|ref|XP_003739937.1| PREDICTED: ATP-dependent RNA helicase DRS1-like [Metaseiulus
occidentalis]
Length = 972
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 273/450 (60%), Gaps = 22/450 (4%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
++++ ++KTFKEL L D L+E + + ++PS +Q +P L+G+D + A+TGSGKT
Sbjct: 11 VSDDNKIKTFKELKLSDWLLERLKIISIQSPSPVQRNCVPEILKGRDCLACAKTGSGKTL 70
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALP+L+ L R FA +LSPTRELAIQI+EQF LG ++L+ ++VGG
Sbjct: 71 AFALPVLEKLF------REPYGIFALILSPTRELAIQIAEQFRILGKKVNLKDCLVVGGT 124
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLT----NTKGFSLGTLKYLVLDEADRLLNDDFEK 176
D++ Q L +RPHIVVATPGRL DHL + K ++ L+LDEAD+LL+ +
Sbjct: 125 DIVDQGRELAQRPHIVVATPGRLADHLDFAAEDMKPL-FSKIQMLILDEADQLLSGKYND 183
Query: 177 SLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVP 236
L I + +P+ RQT LFSAT+T+ +++LQ + +P A S +TVD+L Q+ P
Sbjct: 184 QLKMIFSALPKKRQTLLFSATLTRTIQELQMLAMTDPFFYMAPSSIATVDSLVQRVVLTP 243
Query: 237 AKYKDCYLVYILTEVSASST----MVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 292
+D YL+ ++ + ++ ++F T + L+L + +LG R + + +Q +R
Sbjct: 244 DHARDTYLIQVVKQFQEKNSKGLIIIFVATRKKCQALSLGMDSLGFRNVSLHAQRTQRER 303
Query: 293 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 352
+ AL FK+ IL+ TDVA+RGLDIP V++V+N+++P + K Y+HRVGRTARAG G+
Sbjct: 304 VAALATFKSSATKILVATDVAARGLDIPRVELVVNHNVPNDPKLYVHRVGRTARAGAGGL 363
Query: 353 AISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG---- 408
+++L ++ +IEK +G + + ++ E++ ++ +V A R +++ + ++
Sbjct: 364 SVTLATPQDIHLLHEIEKHVGVTMTKMKIDDREIVKIMAQVNVAVREAEIRMDETDFEER 423
Query: 409 ---NKRRRKGGDEDDDIGRQFGINKKKLSK 435
KR+R D +G++ +KKK K
Sbjct: 424 QLIYKRKRLLLKSQDLMGKRSDASKKKFKK 453
>gi|223590193|sp|A5DLE0.2|DBP8_PICGU RecName: Full=ATP-dependent RNA helicase DBP8
gi|190347673|gb|EDK39993.2| hypothetical protein PGUG_04091 [Meyerozyma guilliermondii ATCC
6260]
Length = 433
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 182/441 (41%), Positives = 262/441 (59%), Gaps = 30/441 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK+LG+ L+EA + ++P+ IQAE IP L G+D IG A+TGSGKT AFA P++
Sbjct: 2 SFKDLGVSKWLLEALAAMKIRSPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E + VL+PTRELA+QI+EQF ALG+ ++++ AV+VGG DM++Q L
Sbjct: 62 KWSE------DPFGIYGLVLTPTRELALQIAEQFLALGASMNIKVAVVVGGEDMVKQALE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVI 185
+ K PH ++ATPGRL DH+ N+ ++G LK +LVLDEADRLL++ F L+ ++
Sbjct: 116 IQKSPHFIIATPGRLADHILNSGDDTVGGLKRIKFLVLDEADRLLSNSFGSDLERCFKIL 175
Query: 186 P--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ + K PV +I + + + TL Y FVP+
Sbjct: 176 PDASKRQTLLFTATVTDAVRALKDKPVPEGKKPVFIHEIVSKDQVAIPATLTISYVFVPS 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + +S +VF +L LR L R + M QS+R +
Sbjct: 236 YVKEAYLHNILVSPKYEKASAIVFVNRTYTAEILRRTLRKLDIRVASLHSEMPQSERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++F+AG +LI TDVASRGLDIP+V++V+N DIP + DYIHRVGRTARAG+ G ++S
Sbjct: 296 LHRFRAGAARVLIATDVASRGLDIPNVELVVNQDIPADPDDYIHRVGRTARAGKKGGSVS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+V++ ++E L IE I KK+ LLE V + K I + + KR
Sbjct: 356 IVSEKDVERILAIENHINKKMD-----------LLEEVNDDKIIKESLSIVTAAKRESVA 404
Query: 416 GDEDDDIGRQFGINKKKLSKR 436
E + G + INK+K +R
Sbjct: 405 DMEKEGFGEKRKINKRKREER 425
>gi|194863293|ref|XP_001970368.1| GG23409 [Drosophila erecta]
gi|190662235|gb|EDV59427.1| GG23409 [Drosophila erecta]
Length = 526
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 179/415 (43%), Positives = 248/415 (59%), Gaps = 20/415 (4%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR LV+ +G K + IQ + IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKETNPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + C + S +TVDTL Q+Y
Sbjct: 176 RCLPKKRQNLFFSATMKDFIKESSIFPIASDCF----EWSQDSDVATVDTLDQRYLLCAD 231
Query: 238 KYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D L+ L E +++ M+FT T +LL++ L+N+ + + G M Q +R+
Sbjct: 232 YDRDMVLIEALRKYREENESANVMIFTNTKKYCQLLSMTLKNMDIDNVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YIHRVGRTARAGR G++
Sbjct: 292 AALSRFKSNQVRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMS 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
IS+ +LE IE+ I KL E P ++ V + +V +R S+M + ++
Sbjct: 352 ISIFRFPRDLELLGAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNN 406
>gi|17136814|ref|NP_476927.1| DEAD box protein 45A [Drosophila melanogaster]
gi|12643712|sp|Q07886.2|DDX49_DROME RecName: Full=Probable ATP-dependent RNA helicase Dbp45A;
Short=DEAD box protein 45A
gi|7303950|gb|AAF58994.1| DEAD box protein 45A [Drosophila melanogaster]
gi|16185764|gb|AAL13957.1| LD47509p [Drosophila melanogaster]
Length = 521
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 255/437 (58%), Gaps = 30/437 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR LV+ +G K + IQ + IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + C + S +TV+TL Q+Y
Sbjct: 176 RCLPKTRQNLFFSATMKDFIKESSIFPIASDCF----EWSQDSDVATVETLDQRYLLCAD 231
Query: 238 KYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D L+ L E ++ M+FT T +LL++ L+N+ + + G M Q +R+
Sbjct: 232 YDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YIHRVGRTARAGR G++
Sbjct: 292 AALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMS 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG---- 408
IS+ +LE IE+ I KL E P ++ V + +V +R S+M + ++
Sbjct: 352 ISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDER 411
Query: 409 --NKRRR----KGGDED 419
N RR+ +G D D
Sbjct: 412 AQNYRRKTWIMEGKDPD 428
>gi|403360910|gb|EJY80150.1| hypothetical protein OXYTRI_22568 [Oxytricha trifallax]
Length = 488
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 255/423 (60%), Gaps = 32/423 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK L L + +++ E +G K P++IQ +++PH L+GK++IG AQTGSGKT FALP+LQ
Sbjct: 9 TFKSLNLDNWIIKNLEEIGIKAPTQIQIDSLPHILKGKNIIGCAQTGSGKTACFALPMLQ 68
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL-GSGISLRCAVLVGGVDMMQQTL 127
L A + V F +L+P+REL +QI + E+ G +++R VLVGGVD M+Q
Sbjct: 69 KL---AADPYGV---FGLILAPSRELCMQIKQSIESFVGQNMNIRVCVLVGGVDYMKQIK 122
Query: 128 ALGKRPHIVVATPGRLMDHLTNTK-GFS--LGTLKYLVLDEADRLLNDDFEKS-LDEILN 183
L + PHI++A PGR++ +L N G L L++LV DEADR+L +D KS L +IL
Sbjct: 123 ELQEIPHIIIACPGRMVHYLDNDHYGLKDYLQNLQFLVFDEADRMLTEDTMKSDLVKILE 182
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPV-------------KIEAASK--YSTVDTL 228
++P RQT LFSATM V+ R KN + EAA++ TV L
Sbjct: 183 ILPNERQTLLFSATM---VQNYDRNISKNLIFGEDNKREMVGIGNTEAANEEFQKTVQNL 239
Query: 229 KQQYRFVPAKYKDCYLVYILTEVSASST---MVFTRTCDATRLLALMLRNLGQRAIPISG 285
Q+ F+P K+ YL+Y+L ++FT TC LA++L+ L A I
Sbjct: 240 DQKIVFIPENVKEAYLIYLLKNQKLKKQQQCIIFTSTCKNCHFLAMLLQELEFDATFIHS 299
Query: 286 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 345
++Q KRL L +FK+ I++ TDVASRGLD+P V VIN+DIP N KDY+HRVGRTA
Sbjct: 300 QLNQRKRLNNLARFKSNYTKIIVATDVASRGLDMPLVQTVINFDIPKNPKDYVHRVGRTA 359
Query: 346 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 405
RAGR G ++SLV QY+++ L EK +G K+ + E+EVL + + + ++ ++ +
Sbjct: 360 RAGRGGNSVSLVTQYDIDLILACEKYVGIKIDKLELNEKEVLDDINHIMKVMQVVRIKMA 419
Query: 406 DSG 408
+ G
Sbjct: 420 EQG 422
>gi|378754810|gb|EHY64839.1| hypothetical protein NERG_02242 [Nematocida sp. 1 ERTm2]
Length = 421
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 247/408 (60%), Gaps = 9/408 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M EEK KTF E L LVEA G P++IQ + + + + ++ ++ TG+GKT
Sbjct: 1 MPEEK--KTFAEYTLDTSLVEALAKKGITQPTEIQKLMLTNLVNRQSILAISNTGTGKTL 58
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
A+ LPI+ LL+ + F+A V+ PTREL+ Q+ +G+ I LR ++L+G
Sbjct: 59 AYLLPIMHTLLQDDK------YFYAMVILPTRELSQQVHAVLADIGAEIGLRTSLLIGAT 112
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D++ Q +L RPHIV+ TPGR+ HL NTKG S+ + KYLVLDE DRLL++DF+ ++
Sbjct: 113 DLLSQGKSLAARPHIVIGTPGRINHHLRNTKGISVSSFKYLVLDECDRLLDNDFDGDINN 172
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL +I + T+LFSAT+TK+V + + NP+ + + QQY ++P KYK
Sbjct: 173 ILEMISP-KYTFLFSATLTKRVNAFKEKRMNNPLLYNVQKDEGIPENILQQYIYLPQKYK 231
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+ YL I+ + + +VF +TC + +LR LG+ I G+ +Q R + F+
Sbjct: 232 EMYLYSIVHNLGSRKCIVFVKTCITAERIERILRFLGESVCSIHGNKTQDIRTETIEMFR 291
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G+ +ILI TDV +RG+D+ + ++INYD+P K+YIHR+GRT RAG G +I+LV QY
Sbjct: 292 RGKHSILISTDVVARGMDMDGIKVIINYDMPDGHKEYIHRIGRTGRAGEVGSSITLVTQY 351
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
+++ + ++E + KK+ E+ E + L++ V +AKR + M +K+ G
Sbjct: 352 DVDDFRKLEVKLNKKMDEYSVSSELIYSLVDSVDQAKREAAMDMKEEG 399
>gi|91787410|ref|YP_548362.1| DEAD/DEAH box helicase [Polaromonas sp. JS666]
gi|91696635|gb|ABE43464.1| DEAD/DEAH box helicase-like protein [Polaromonas sp. JS666]
Length = 492
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/420 (41%), Positives = 251/420 (59%), Gaps = 14/420 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G++T + IQ +AIP L+GKD++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L+ EN T PA A VL PTRELA+Q++EQ + +LR AV+ GG+DM Q
Sbjct: 64 RMLK-HENASTSPARHPVRALVLLPTRELAVQVAEQVKLYAKHTNLRSAVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L + ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKQGVEVLVATPGRLLDHI-EAKNTVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L++PV IE A +T T++Q + V A K L
Sbjct: 182 PKQRITLLFSATFSPEIKRLASSYLQDPVTIEVARSNATASTVEQHFYSVGADDKRRALH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
IL E VF + LA L G + + G SQ +RL AL+ FK GE +
Sbjct: 242 QILKERGMKQAFVFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALDAFKKGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A+S V +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVSFVASSDQRLV 361
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 425
IEKLI K+ P E +E + RIS+ + G + R+G + ++ GR+
Sbjct: 362 ADIEKLIKTKIELEPIEFDE---------DRPRISEQGRINDGRRMYRQGNEGEEGAGRE 412
>gi|340502092|gb|EGR28809.1| hypothetical protein IMG5_168450 [Ichthyophthirius multifiliis]
Length = 409
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 250/409 (61%), Gaps = 13/409 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK L L L++ CE + +KTP+KIQ +IP L K+++ A+TGSGKT AF+ PILQ
Sbjct: 5 TFKSLNLHSFLLKICEKIEYKTPTKIQQLSIPAILNKKNVVINAETGSGKTAAFSFPILQ 64
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L +E+ R + FA VL+ RELA+QISEQ GS ++LR + LVGG+D +Q
Sbjct: 65 FL---SEDPRGI---FAIVLTANRELALQISEQLSIFGSSLNLRVSTLVGGIDFAKQASE 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L PHI+V TPGR D L + F + L++LVLDEADRL + + EI+ IP
Sbjct: 119 LELIPHIIVGTPGRTADMLRKSDIFREYVENLEFLVLDEADRLFEEKVFTDIQEIIGQIP 178
Query: 187 RMRQTYLFSATMTKK---VKKLQRA-CLKNPVKIEAASKYS-TVDTLKQQYRFVPAKYKD 241
+Q L +AT+ ++ KKLQ+ C+K+ ++ + +K V T+ Q+Y +P KD
Sbjct: 179 EKKQVILATATINEQDFCPKKLQKILCIKDNIEFFSTNKQKKMVQTVVQKYGLIPELVKD 238
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
+L+ IL + + ++FT C L +L+NL + + + QS+R+ L F+
Sbjct: 239 EFLINILEKYKETQIIIFTNKCQTCNFLHFLLKNLNFSNVNLHSKLKQSQRIAHLKTFRN 298
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
NIL+ TDVASRGLDIP+V +VINYD+P N +DYIHRVGRTAR G+ GV+IS+ Q++
Sbjct: 299 QTVNILVSTDVASRGLDIPAVQLVINYDMPRNYEDYIHRVGRTARKGKRGVSISICTQFD 358
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
+E IE IG+++ E + E + L +V +AK+I ++ + + +K
Sbjct: 359 VELLKNIEANIGEEMKEIQIDNEIINGLQVKVGKAKKIVKIQLSEKESK 407
>gi|354546093|emb|CCE42822.1| hypothetical protein CPAR2_204650 [Candida parapsilosis]
Length = 443
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/439 (41%), Positives = 264/439 (60%), Gaps = 30/439 (6%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++LG+ L E+ + P+ IQA IP L+G+D IG A+TGSGKT AFA P+L
Sbjct: 6 FQDLGVARWLSESLVAMKIHKPTSIQAACIPAILKGQDCIGGAKTGSGKTIAFAAPMLT- 64
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+ +E+ + F VL+PTRELA+QI+EQ+ ALG+ ++++ V+VGG D ++Q L L
Sbjct: 65 --QWSEDPYGI---FGLVLTPTRELALQIAEQYTALGAQMNIKVCVVVGGEDFVKQALEL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVIP 186
K+PH V+ATPGRL DH+ N+ ++ L+ YLVLDEADRLL++ F L+ +V+P
Sbjct: 120 QKKPHFVIATPGRLADHILNSGEETISGLRRVRYLVLDEADRLLSNSFSSDLERCFSVLP 179
Query: 187 RM--RQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T VK L+ R+ K PV +++ K + TL +Y FVP+
Sbjct: 180 SSDRRQTLLFTATITDSVKALKEKPRSAGKLPVFMHEVDTVDKVAIPSTLSIEYVFVPSY 239
Query: 239 YKDCYL--VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL + +L + S+ +VF +L LR L R + M QS+R +L
Sbjct: 240 VKEAYLHSILLLPKYKESTAVVFVNRTITAEVLRRALRKLDFRVASLHSEMPQSERTNSL 299
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++FKAG ILI TDVASRGLDIP+V++V+N+DIP + D+IHRVGRTARAGR G AIS+
Sbjct: 300 HRFKAGAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAISI 359
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+++ ++E IE+ I KK+ LLE + + K I + KR
Sbjct: 360 ISEKDIERIQSIEERINKKME-----------LLEEINDDKVIKDSLGAMTTAKRESMSE 408
Query: 417 DEDDDIGRQFGINKKKLSK 435
+ + G + INK+K SK
Sbjct: 409 MDKEGFGERRKINKRKHSK 427
>gi|161761223|pdb|3BER|A Chain A, Human Dead-Box Rna-Helicase Ddx47, Conserved Domain I In
Complex With Amp
Length = 249
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/220 (67%), Positives = 179/220 (81%), Gaps = 6/220 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 36 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 95
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 96 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 149
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 150 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 209
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 220
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +S
Sbjct: 210 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSS 249
>gi|150863861|ref|XP_001382482.2| Dead-Box Protein 8, ATP-dependent helicase involved in rRNA
processing [Scheffersomyces stipitis CBS 6054]
gi|158514820|sp|A3LP87.2|DBP8_PICST RecName: Full=ATP-dependent RNA helicase DBP8
gi|149385117|gb|ABN64453.2| Dead-Box Protein 8, ATP-dependent helicase involved in rRNA
processing [Scheffersomyces stipitis CBS 6054]
Length = 445
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 263/437 (60%), Gaps = 30/437 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F++LG+ L EA + TP+ IQ+ IP L G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFEDLGVSRWLSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ +E+ + F VL+PTRELA+QI+EQF ALG+ ++++ +V+VGG D ++QTL
Sbjct: 62 ---QWSEDPFGI---FGLVLTPTRELALQIAEQFAALGASMNIKISVVVGGEDFVKQTLE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
L K+PH V+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L+ +V+
Sbjct: 116 LQKKPHFVIATPGRLADHILNSGEETISGLRRIKYLVLDEADRLLSNSFGGDLERCFSVL 175
Query: 186 P--RMRQTYLFSATMTKKVKKLQR---ACLKNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ A K PV ++E + + TL +Y FVP+
Sbjct: 176 PPSEKRQTCLFTATVTDAVRALKEKPPAQGKPPVFLHEVETVDQVAIPSTLSIKYVFVPS 235
Query: 238 KYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + S+ ++F +L LR L R + M QS+R +
Sbjct: 236 YVKEAYLNSILRLPQYEKSTAVIFVNRTTTAEVLRRTLRKLEFRVASLHSEMPQSERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
+ +FKAG ILI TDVASRGLDIPSV++V+N+DIP + D+IHRVGRTARAGR+G A++
Sbjct: 296 VQRFKAGAARILIATDVASRGLDIPSVELVVNFDIPADPDDFIHRVGRTARAGRSGDAVT 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++ + +++ IE+ I KK+ LLE VT+ I+ S KR
Sbjct: 356 IIAEKDIDRIASIEERINKKME-----------LLEEVTDDSVITDSLTATSVAKRESLM 404
Query: 416 GDEDDDIGRQFGINKKK 432
+ ++ G + IN+KK
Sbjct: 405 EMDKENFGEKRKINRKK 421
>gi|146414784|ref|XP_001483362.1| hypothetical protein PGUG_04091 [Meyerozyma guilliermondii ATCC
6260]
Length = 433
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 260/440 (59%), Gaps = 30/440 (6%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+LG+ L+EA + + P+ IQAE IP L G+D IG A+TGSGKT AFA P++
Sbjct: 3 FKDLGVSKWLLEALAAMKIRLPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMTK 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E + VL+PTRELA+QI+EQF ALG+ ++++ AV+VGG DM++Q L +
Sbjct: 63 WSE------DPFGIYGLVLTPTRELALQIAEQFLALGASMNIKVAVVVGGEDMVKQALEI 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVIP 186
K PH ++ATPGRL DH+ N+ ++G LK +LVLDEADRLL++ F L+ ++P
Sbjct: 117 QKSPHFIIATPGRLADHILNSGDDTVGGLKRIKFLVLDEADRLLSNSFGSDLERCFKILP 176
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T V+ L+ + K PV +I + + + TL Y FVP+
Sbjct: 177 DASKRQTLLFTATVTDAVRALKDKPVPEGKKPVFIHEIVSKDQVAIPATLTISYVFVPSY 236
Query: 239 YKDCYL--VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL + +L + + +VF +L LR L R + M QS+R +L
Sbjct: 237 VKEAYLHNILVLPKYEKALAIVFVNRTYTAEILRRTLRKLDIRVASLHSEMPQSERTNSL 296
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++F+AG +LI TDVASRGLDIP+V++V+N DIP + DYIHRVGRTARAG+ G ++S+
Sbjct: 297 HRFRAGAARVLIATDVASRGLDIPNVELVVNQDIPADPDDYIHRVGRTARAGKKGGSVSI 356
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
V++ ++E L IE I KK+ LLE V + K I + + KR
Sbjct: 357 VSEKDVERILAIENHINKKMD-----------LLEEVNDDKIIKESLSIVTAAKRESVAD 405
Query: 417 DEDDDIGRQFGINKKKLSKR 436
E + G + INK+K +R
Sbjct: 406 MEKEGFGEKRKINKRKREER 425
>gi|195581763|ref|XP_002080703.1| GD10627 [Drosophila simulans]
gi|194192712|gb|EDX06288.1| GD10627 [Drosophila simulans]
Length = 527
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/433 (42%), Positives = 254/433 (58%), Gaps = 22/433 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR LV+ +G K + IQ + IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+L+ DF++SL I
Sbjct: 116 MVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLSGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQ-RACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+P+ RQ FSATM +K+ N + S +TV+TL Q+Y +D
Sbjct: 176 RCLPKTRQNLFFSATMRDFMKESSIFPIASNCFEWSQDSDVATVETLDQRYLLCADYDRD 235
Query: 242 CYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
L+ L E ++ M+FT T +LL++ L+N+ + + G M Q +R+ AL+
Sbjct: 236 MVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMDIDNVCLHGFMRQKERVAALS 295
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YIHRVGRTARAGR G++IS+
Sbjct: 296 RFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIF 355
Query: 358 N-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG------NK 410
+LE IE+ I KL E P ++ V + +V +R S+M + ++ N
Sbjct: 356 RFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDERAQNY 415
Query: 411 RRR----KGGDED 419
RR+ +G D D
Sbjct: 416 RRKTWIMQGKDPD 428
>gi|195379947|ref|XP_002048732.1| GJ21163 [Drosophila virilis]
gi|194143529|gb|EDW59925.1| GJ21163 [Drosophila virilis]
Length = 519
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 187/446 (41%), Positives = 256/446 (57%), Gaps = 26/446 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F++LGLR L + +G K + IQ IP L GKD IG A+TGSGKT AF
Sbjct: 2 QRKEPNPFQKLGLRPWLAKQLTKLGLKGVTPIQENCIPAILSGKDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + + CL + S +TVDTL+Q+Y
Sbjct: 176 RCLPKTRQNLFFSATMKDFMKESSIFPIAKDCL----EWSQESDVATVDTLEQRYLLCAD 231
Query: 238 KYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D L+ L + ++ M+FT T +LL++ L ++ + + G M Q +R+
Sbjct: 232 YDRDMVLIEALRKYREQNENANVMIFTNTKKYCQLLSMTLSSMEIENVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ LI TDVA+RGLDIPSV +VIN+ +P K+YIHRVGRTARAGR G+A
Sbjct: 292 AALSRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGLA 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG---- 408
IS+ +LE IE I KL E P ++ V + +V +R S+M + ++
Sbjct: 352 ISIFRFPRDLELLGAIEAEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDER 411
Query: 409 --NKRRRKGGDEDDDIGRQFGINKKK 432
N RR+ E D + + +KK
Sbjct: 412 AQNYRRKTWIMEGKDPDQMEALYRKK 437
>gi|448527184|ref|XP_003869451.1| Dbp8 protein [Candida orthopsilosis Co 90-125]
gi|380353804|emb|CCG23316.1| Dbp8 protein [Candida orthopsilosis]
Length = 443
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 182/439 (41%), Positives = 263/439 (59%), Gaps = 30/439 (6%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++LG+ L E+ E + P+ IQA IP L+G+D IG A+TGSGKT AFA P+L
Sbjct: 6 FQDLGVARWLSESLEAMKINKPTSIQAACIPAILKGQDCIGGAKTGSGKTIAFAAPMLT- 64
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+ +E+ + F VL+PTRELA+QI+EQ+ ALG+ ++++ V+VGG D ++Q L L
Sbjct: 65 --QWSEDPYGI---FGLVLTPTRELALQIAEQYTALGAQMNIKVCVVVGGEDFVKQALEL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVIP 186
K+PH V+ATPGRL DH+ N+ ++ L+ YLVLDEADRLL++ F L+ +V+P
Sbjct: 120 QKKPHFVIATPGRLADHVLNSGEETVSGLRRVRYLVLDEADRLLSNSFSSDLERCFSVLP 179
Query: 187 --RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T VK L+ R K PV +++ K + TL+ +Y FVP+
Sbjct: 180 PSDKRQTLLFTATVTDSVKALKEKPRPTGKLPVFMHEVDTVDKVAIPSTLQIEYVFVPSY 239
Query: 239 YKDCYL--VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL + +L + S+ +VF +L LR L R + M QS+R +L
Sbjct: 240 VKEAYLHSILLLPKYKESTAVVFVNRTVTAEVLRRALRKLDFRVASLHSEMPQSERTNSL 299
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++FKA ILI TDVASRGLDIP+V++V+N+DIP + D+IHRVGRTARAGR G AIS+
Sbjct: 300 HRFKADAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAISI 359
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+ + ++E IE+ I KK+ LLE + + K I + KR
Sbjct: 360 IGEKDIERIQSIEERINKKME-----------LLEEINDDKVIKDSLSAMTTAKRESLSE 408
Query: 417 DEDDDIGRQFGINKKKLSK 435
+ + G + INK+K SK
Sbjct: 409 MDKEGFGEKRKINKRKYSK 427
>gi|430813904|emb|CCJ28790.1| unnamed protein product [Pneumocystis jirovecii]
Length = 464
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 181/433 (41%), Positives = 254/433 (58%), Gaps = 32/433 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKE GL L+E + V K P+ IQA I LEG++ IG A+TGSGKT AF LPI+Q
Sbjct: 43 TFKECGLHAWLIETLKKVSIKKPTAIQATCIGPILEGQNCIGSAKTGSGKTMAFTLPIIQ 102
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + FA +L+PTRELA+QIS+Q +G+ I+L+ ++GGVDM+ Q L
Sbjct: 103 IL------SQDPYGVFALILTPTRELALQISDQLAIIGTSINLKHTTIIGGVDMITQALI 156
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVI 185
L KRPHIV+ATPGRL DH+ ++ ++ K +LVLDEADRLL +F K + E + ++
Sbjct: 157 LVKRPHIVIATPGRLADHIRSSGQETINAFKRVRFLVLDEADRLLTPNFSKDMQECIRIL 216
Query: 186 PRM--RQTYLFSATMTKKVKKLQRACL---KNPVKIEAASKYSTV--DTLKQQYRFVPAK 238
P+ RQT LF+AT+T ++KLQ K P+ + K S +L Q Y F+P+
Sbjct: 217 PKAENRQTLLFTATITDAIRKLQTQSSESGKKPLFLYNVIKSSVTIPSSLIQTYIFIPSH 276
Query: 239 YKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL I E ST+VFT LL M L + + M Q KR+ +L
Sbjct: 277 VKETYLYRIFNTQEYKEKSTIVFTNRTRTAELLCRMFCILELKVTALHSEMPQKKRIQSL 336
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
+FKA ILI TDVASRGLDIP V ++INYD+P + DYIHRVGRTARA ++G +I+
Sbjct: 337 ERFKAEASKILIATDVASRGLDIPFVKLIINYDVPKDPNDYIHRVGRTARAEKSGESITF 396
Query: 357 VNQYELEWYLQIEKLIGKKL------PEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
V+Q ++ IEK I ++ +F +E L V+ AK +++++ + G
Sbjct: 397 VSQRDILLIQAIEKHISTRMEKNSYISDFKVTQE-----LNTVSSAKIEAEISMTNFGKL 451
Query: 411 R---RRKGGDEDD 420
R +RK GD ++
Sbjct: 452 RENNKRKHGDFNE 464
>gi|195332686|ref|XP_002033028.1| GM21090 [Drosophila sechellia]
gi|194124998|gb|EDW47041.1| GM21090 [Drosophila sechellia]
Length = 522
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/415 (42%), Positives = 247/415 (59%), Gaps = 20/415 (4%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR LV+ +G K + IQ + IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + C + S +TV+TL Q+Y
Sbjct: 176 RCLPKTRQNLFFSATMKDFMKESSIFPIASDCF----EWSQDSDVATVETLDQRYLLCAD 231
Query: 238 KYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D L+ L + ++ M+FT T +LL++ L+N+ + + G M Q +R+
Sbjct: 232 YDRDMVLIEALRKYREGNENANVMIFTNTKKYCQLLSMTLKNMDIDNVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YIHRVGRTARAGR G++
Sbjct: 292 AALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMS 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
IS+ +LE IE+ I KL E P ++ V + +V +R S+M + ++
Sbjct: 352 ISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNN 406
>gi|410076594|ref|XP_003955879.1| hypothetical protein KAFR_0B04480 [Kazachstania africana CBS 2517]
gi|372462462|emb|CCF56744.1| hypothetical protein KAFR_0B04480 [Kazachstania africana CBS 2517]
Length = 435
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 254/424 (59%), Gaps = 21/424 (4%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
++ +FK+LGL L+++ + P+ IQ+ IP L+G+D IG A+TGSGKT FA P
Sbjct: 3 DITSFKQLGLSKWLLDSLRAMKITQPTTIQSHCIPEILKGRDCIGGAKTGSGKTITFAAP 62
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L A F VL+PTRELA+QI+EQF ALGS +++R A++VGG ++ Q
Sbjct: 63 ML------ARWSEDPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVALIVGGESIVNQ 116
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEIL 182
+ L ++PH ++ATPGRL H+ N+ ++G LK YLVLDEAD LLND F K L +
Sbjct: 117 AIELQRKPHFIIATPGRLAHHILNSGEDTVGGLKRAKYLVLDEADFLLNDTFAKDLSTCI 176
Query: 183 NVIP--RMRQTYLFSATMTKKVKKLQRACLKN---PV---KIEAASKYSTVDTLKQQYRF 234
+P RQT LF+AT+T +V+ LQ A K P+ ++E+ K + TLK +Y
Sbjct: 177 GALPDKNARQTLLFTATITDQVRALQNAPAKGGKLPIFAYQVESVDKVAIPSTLKVEYIL 236
Query: 235 VPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 292
+P K+ YL +LT S+ ++F +L L++L R + MSQ +R
Sbjct: 237 IPEHVKEAYLYQLLTCENYINSNVIIFVNRTATAEVLRKTLKHLDLRVASLHSQMSQQER 296
Query: 293 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 352
+L++F+A ILI TDVASRGLDIP+V++V+NYDIP++ YIHR GRTARAG++G
Sbjct: 297 TNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDTYIHRSGRTARAGKSGD 356
Query: 353 AISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIKDSGNK 410
AIS + ++ IE+ I KK+ E + ++ L +VT+AKR S M ++
Sbjct: 357 AISFITPRDVSRIAAIEERINKKMTECDKVHDTAVIRKALVKVTKAKRESLMEMEKENFG 416
Query: 411 RRRK 414
RRK
Sbjct: 417 ERRK 420
>gi|290996400|ref|XP_002680770.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284094392|gb|EFC48026.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 614
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 179/415 (43%), Positives = 260/415 (62%), Gaps = 20/415 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEG------------KDLIGLAQTGS 56
+F LGL L + + +G+K P+KIQ E IP A++ D+IG+++TGS
Sbjct: 144 SFASLGLSQVLCDTLKEIGYKHPTKIQREVIPVAIKEAFHDDETGFTKYNDIIGISETGS 203
Query: 57 GKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVL 116
GKT ++ LP+L+ LL++ + A +L+PTRELA+QI ALGS I + L
Sbjct: 204 GKTASYVLPVLERLLQLKGDPSPCSAL---ILAPTRELAVQIQGHVNALGSKIGITSTTL 260
Query: 117 VGGVDMMQQTLALGK-RPHIVVATPGRLMDHLTNTK-GFSLGTLKYLVLDEADRLLNDDF 174
GG + +L K R H+VV TPGR+ D L K F+L ++LVLDEAD++L +F
Sbjct: 261 TGGTSIANDSLRFKKNRYHVVVGTPGRVCDLLEFGKSNFNLNHTRFLVLDEADKMLGSEF 320
Query: 175 EKSLDEILNVIPRMRQT-YLFSATMTKKVKKLQR-ACLKNPVKIE-AASKYSTVDTLKQQ 231
+K L I + R + T YLFSATMT K+ KL + + NPVKI+ +SKY TVDTL QQ
Sbjct: 321 DKWLTTISEKLRRKQCTVYLFSATMTTKIDKLLKLHQMTNPVKIQVTSSKYHTVDTLTQQ 380
Query: 232 YRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
Y +P KYK+ YLVY+L E +VF LL+++LR+L +P+SGHM ++
Sbjct: 381 YLLLPEKYKEQYLVYLLNENPGKRILVFAGQNSTCILLSILLRSLKFPTVPLSGHMDETH 440
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R L KF +G+ IL+ TD+A+RGLDIP VD+VIN+DIP +SK+Y+HRVGRTAR G G
Sbjct: 441 RQHCLRKFVSGDRPILVATDIAARGLDIPLVDIVINFDIPVHSKEYVHRVGRTARIGNQG 500
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
+A++ V QY+L+++ +IE LI KK+ +E +LL V++A ++++ + D
Sbjct: 501 LAVTFVTQYDLQYFQKIEALIEKKMDVCNVNKENAMLLTNTVSQALKLAKKKMSD 555
>gi|50551977|ref|XP_503463.1| YALI0E02552p [Yarrowia lipolytica]
gi|74659870|sp|Q6C799.1|DBP8_YARLI RecName: Full=ATP-dependent RNA helicase DBP8
gi|49649332|emb|CAG79042.1| YALI0E02552p [Yarrowia lipolytica CLIB122]
Length = 442
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 255/419 (60%), Gaps = 23/419 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LGL + L E+ N+ PS IQ IP ++GKD IG A+TGSGKT AFA P+L
Sbjct: 2 SFTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPML- 60
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
AE + F VL+PTRELAIQI+EQF ALG+ +++R A++ GGVDM++Q+L
Sbjct: 61 -----AEWSKDPCGIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDMVKQSLE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNT-----KGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
L K PH V+ATPGRL DH+ ++ +GF ++Y+V+DEADRLL F L ++
Sbjct: 116 LQKMPHFVIATPGRLADHIRSSGEDTIRGFR--RVRYVVMDEADRLLTPGFVPDLKTCMD 173
Query: 184 VIP--RMRQTYLFSATMTKKVKKLQ-RACLKNPVKI-EAASKYSTVDTLKQQYRFVPAKY 239
++P RQT LF+AT+T V+ L+ R K P I E AS + TL Q Y F+P
Sbjct: 174 LLPDPSKRQTLLFTATVTDAVRALKDRTGEKGPPFIHEIASDIAVPSTLTQSYLFLPGYV 233
Query: 240 KDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
++ YL ILT + S ++F L ML L + + M Q +R+ AL
Sbjct: 234 REAYLWAILTHPDNEKKSAIIFVNRTQTAETLRRMLMALDVKTASLHSEMRQQERVNALG 293
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+F+A +L+ TDVASRGLDIP+V+MVIN+D+P ++ DYIHRVGRTARAGR G ++SLV
Sbjct: 294 RFRAQAARVLVATDVASRGLDIPTVEMVINFDLPADADDYIHRVGRTARAGRKGQSVSLV 353
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKR--ISQMTIKDSGNKRR 412
+ ++ IE+ +G K+ ++ E++ ++ L + AKR + M ++ G ++R
Sbjct: 354 TERDVTRVTNIEERVGTKMEKYDLIEDDKVVEEYLTPASTAKRQAVLDMEAENFGERKR 412
>gi|213403328|ref|XP_002172436.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus
yFS275]
gi|212000483|gb|EEB06143.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus
yFS275]
Length = 456
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/428 (42%), Positives = 255/428 (59%), Gaps = 22/428 (5%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M E++ +TF LG+ LVE + V + P+ IQ I LEG D IG A+TGSGKT
Sbjct: 1 MTNERK-ETFGSLGISPWLVETLQAVAIQEPTPIQKGVIKKVLEGADCIGGAKTGSGKTI 59
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL+ R FA +L+PTRELAIQI EQF ALG+ ++L+ ++VGG+
Sbjct: 60 AFALPILEKW------ARDPFGTFAVILTPTRELAIQIDEQFAALGAPMNLKHILVVGGM 113
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEK 176
DM+ Q +AL KRPHIVVATPGRL D L + G SL +++V DEADRLL+ F
Sbjct: 114 DMVAQAIALSKRPHIVVATPGRLAD-LIRSNGEETYASLHRTQFVVFDEADRLLSPTFAD 172
Query: 177 SLDEILNVIP--RMRQTYLFSATMTKKVKKL---QRACLKNPVKIEAASK--YSTVDTLK 229
LD+ L V+P RQT LF+ATMT ++ L + K P+ + S ++L+
Sbjct: 173 DLDDCLEVLPPPEKRQTLLFTATMTDAIRALKDREPHPGKPPLWLYEVDTEGVSIPESLE 232
Query: 230 QQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHM 287
Q Y V + +D YLV +L+ E S +VF LL MLR L R + M
Sbjct: 233 QHYLLVASHVRDAYLVQLLSSPENEDKSVIVFANRTYTVELLYRMLRLLDFRVTCLHSEM 292
Query: 288 SQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARA 347
+Q +R+ +L +F+A +LI TDVASRGLDIPSV MV+NYDIP + DY+HRVGR AR
Sbjct: 293 AQRERVNSLGRFRAEAARVLIATDVASRGLDIPSVKMVVNYDIPRDPDDYVHRVGRAARV 352
Query: 348 GRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKD 406
GR G ++S V +++++ IE +GK++ + + E ++L L+++ EAKR + + D
Sbjct: 353 GRFGESVSFVTEHDVDLIHAIEDRVGKQMTAYESFSENKMLEKLKQINEAKRKVSLELVD 412
Query: 407 SGNKRRRK 414
RRK
Sbjct: 413 EDFGSRRK 420
>gi|149238864|ref|XP_001525308.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013494|sp|A5E0U9.1|DBP8_LODEL RecName: Full=ATP-dependent RNA helicase DBP8
gi|146450801|gb|EDK45057.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 444
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/439 (42%), Positives = 263/439 (59%), Gaps = 31/439 (7%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
++FKELG+ L E+ E + +P+ IQ+ IP L+G+D IG A+TGSGKT AFA
Sbjct: 3 QSFKELGVAKWLSESLEAMKIHSPTSIQSACIPEILKGRDCIGGAKTGSGKTIAFA---- 58
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
AL+ +Q F +L+PTRELA+QI+EQF ALG+ ++++ V+VGG D ++QTL
Sbjct: 59 -ALMLTQWSQDPF-GIFGLILTPTRELALQIAEQFAALGALMNIKVCVVVGGEDFVKQTL 116
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNV 184
L K+PH V+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L +
Sbjct: 117 ELQKKPHFVIATPGRLADHILNSGEETVSGLRRIKYLVLDEADRLLSNSFGSDLQRCFTI 176
Query: 185 IP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAA-SKYSTVDTLKQQYRFV 235
+P RQT LF+AT+T VK L+ RA K PV +++A + + TL Y FV
Sbjct: 177 LPPSEKRQTLLFTATVTDAVKALKDKPRAEGKLPVFLHQVDAGVDQIAIPKTLSTMYVFV 236
Query: 236 PAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P+ K+ YL IL + S+ +VF +L MLR L + + M Q++R
Sbjct: 237 PSYVKEAYLTSILKLPKYEESTAVVFVNRTMTAEVLRRMLRKLEFKVASLHSEMPQTERT 296
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
+L++FKAG ILI TDVASRGLDIP+V++V+N+DIP + D+IHRVGRTARAGR G A
Sbjct: 297 NSLHRFKAGAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDA 356
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
IS++ + ++E IE+ I KK+ LLE V + K I+ K + KR
Sbjct: 357 ISIIGEKDIERIESIEERINKKME-----------LLEGVDDDKVINDSLQKATTAKREA 405
Query: 414 KGGDEDDDIGRQFGINKKK 432
+ + G + +NKKK
Sbjct: 406 MLDMDKESFGERRKVNKKK 424
>gi|429765433|ref|ZP_19297729.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
gi|429186393|gb|EKY27337.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
Length = 426
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 233/375 (62%), Gaps = 2/375 (0%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL + + +++A G++ P++IQ +IP L+G+D++G AQTG+GKT AFA+PI+Q
Sbjct: 3 FKELNVIEPVLKAISEAGYEKPTEIQENSIPVVLKGRDILGCAQTGTGKTAAFAIPIIQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
++ N + + A +++PTRELAIQI E F + ++ V+ GGV+ Q +
Sbjct: 63 IVTAKGNSKE-RSIKALIVAPTRELAIQIEENFTIYAKYLDIKNTVIFGGVNQTSQVRKI 121
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
++VATPGRL+D L N + L +KY VLDEADR+L+ + +I++ +P+ R
Sbjct: 122 NAGVDVLVATPGRLLD-LVNQRHIDLSNVKYFVLDEADRMLDMGMIHDVKKIISKLPKER 180
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM K+V KL + LKNPVK+E ST + + Q FVP K K L+++L
Sbjct: 181 QNLLFSATMPKEVTKLVNSILKNPVKVEVQPVSSTAEIISQGVYFVPKKNKKSLLIHLLK 240
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VF+RT +A L G ++ I G+ SQ++R ALN FK G +L+
Sbjct: 241 DESIKSVIVFSRTKHGANKIAKDLEKAGIQSAAIHGNKSQNQRQLALNNFKEGNIRVLVA 300
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VINYD+P ++ Y+HR+GRT RAG +GVAI+ ++ E + IE
Sbjct: 301 TDIAARGIDIDELSHVINYDLPDVAETYVHRIGRTGRAGASGVAITFCDEEEKAMFRSIE 360
Query: 370 KLIGKKLPEFPAEEE 384
K+IGK +P E E
Sbjct: 361 KIIGKSIPVLEEEYE 375
>gi|167533121|ref|XP_001748241.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773361|gb|EDQ87002.1| predicted protein [Monosiga brevicollis MX1]
Length = 473
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 254/412 (61%), Gaps = 27/412 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F++L L L+ C N+ + P+ +Q +P L +D+ A+TGSGKT AFALPIL+
Sbjct: 2 SFEDLKLSSWLIRQCRNLNFTRPTAVQQACVPAILNDEDVYAAAKTGSGKTAAFALPILE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L +A VL+PTRELA QIS+QF++LG I +R A +VGG+D ++Q +
Sbjct: 62 QL------SHDPYGVYAVVLTPTRELAFQISDQFQSLGKPIGVRVATIVGGIDSIKQAVE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLL-NDDFEKSLDEILNVIPR 187
L +RPHI+VATPGRL H LVLDEADRL+ N+ + LD IL+ +P
Sbjct: 116 LSRRPHIIVATPGRLAVHT-------------LVLDEADRLMTNETLQGHLDVILDALPE 162
Query: 188 MRQTYLFSATMTKKVK-KLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQ LFSAT+ ++ K+ + ++ + + +TV TL+Q+Y F+PA + YL++
Sbjct: 163 ERQNLLFSATLLEEPSGKISQQLHRDLFRYSEIKEEATVTTLRQRYVFLPAHMRFPYLIH 222
Query: 247 ILTEVS---ASSTMVFTRTCDATRLLALMLRNLGQR--AIPISGHMSQSKRLGALNKFKA 301
IL ++ +S ++F TC LAL LR L R A+ MSQ RL AL+KFK+
Sbjct: 223 ILRQLHDDKNNSIVLFVPTCRLCEELALTLRELDLRCTALHSQARMSQKARLDALHKFKS 282
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP+V VINY++P +DY+HRVGRTARAGR G+AI+L+++ +
Sbjct: 283 SFIHILLATDVASRGLDIPTVTYVINYNVPRAPEDYVHRVGRTARAGRGGMAITLMDERD 342
Query: 362 LEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
+E IE+ I KL + ++EE++ + ++ A+R +++ + +SG R
Sbjct: 343 IELLQAIEEHINVKLTAYDDIKDEEIVQSMNKINIARRAAELQLLESGFDER 394
>gi|408399615|gb|EKJ78713.1| hypothetical protein FPSE_01081 [Fusarium pseudograminearum CS3096]
Length = 544
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 187/432 (43%), Positives = 261/432 (60%), Gaps = 36/432 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L +R LV++ EN+ K P+ IQ IP L+G+D IG ++TGSGKT AFA+PILQ
Sbjct: 114 TFSALNVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAVPILQ 173
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E A FA VL+PTRELA+QI EQF+A+ S SL+ ++ GG DM Q +
Sbjct: 174 KWSEDPT------AIFAVVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRTQAIE 227
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSL----DE 180
+GKRPH+++ATPGRL DH+ T G L ++Y+VLDEADRLLN S+ +E
Sbjct: 228 IGKRPHVIIATPGRLADHI-RTSGEDTICGLRRVRYVVLDEADRLLNATGPGSMLPDVEE 286
Query: 181 ILNVIPRM--RQTYLFSATMTKKVKKLQRACLK---NPVKI-EAASKYSTVD-TLKQQYR 233
L+V+P RQT LF+AT+T +V+ L+ +K PV + E ++ + TLKQ Y
Sbjct: 287 CLSVLPPATERQTLLFTATITPEVRALKDMPIKPGKQPVFVCEVDTQTLAIPATLKQMYI 346
Query: 234 FVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +K+ YL ++LTE + T++ F L +LR L R + + Q +
Sbjct: 347 KVPVTHKEHYLHTFLLTEANVDKTVILFCNRTSTADYLHHLLRMLEHRVTSLHSKLPQRQ 406
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R+ L +F+A IL+ TDVA+RGLDIP V +VINYD+P + DYIHRVGRTARAGR G
Sbjct: 407 RIDNLARFRASAARILVATDVAARGLDIPEVSLVINYDLPRDPDDYIHRVGRTARAGRKG 466
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-------LLERVTEAKRISQMTI 404
A+S V Q ++E L IEK +G+ + + EEE V L L+ V+E KR + + +
Sbjct: 467 EAVSFVGQRDVELALTIEKRVGRDMEAW--EEEGVNLETRVVRDALKLVSEKKREALLEV 524
Query: 405 KDS---GNKRRR 413
++ G KR+R
Sbjct: 525 EEGREVGGKRKR 536
>gi|46125837|ref|XP_387472.1| hypothetical protein FG07296.1 [Gibberella zeae PH-1]
gi|91206552|sp|Q4I662.1|DBP8_GIBZE RecName: Full=ATP-dependent RNA helicase DBP8
Length = 547
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/432 (43%), Positives = 261/432 (60%), Gaps = 36/432 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L +R LV++ EN+ K P+ IQ IP L+G+D IG ++TGSGKT AFA+PILQ
Sbjct: 117 TFSALDVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAVPILQ 176
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E A FA VL+PTRELA+QI EQF+A+ S SL+ ++ GG DM Q +
Sbjct: 177 KWSEDPT------AIFAVVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRTQAIE 230
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSL----DE 180
+GKRPH+++ATPGRL DH+ T G L ++Y+VLDEADRLLN S+ +E
Sbjct: 231 IGKRPHVIIATPGRLADHI-RTSGEDTICGLRRVRYVVLDEADRLLNATGPGSMLPDVEE 289
Query: 181 ILNVIPRM--RQTYLFSATMTKKVKKLQRACLK---NPVKI-EAASKYSTVD-TLKQQYR 233
L+V+P RQT LF+AT+T +V+ L+ +K PV + E ++ + TLKQ Y
Sbjct: 290 CLSVLPPATERQTLLFTATITPEVRALKDMPIKPGKQPVFVCEVDTQTLAIPATLKQMYI 349
Query: 234 FVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +K+ YL ++LTE + T++ F L +LR L R + + Q +
Sbjct: 350 KVPVTHKEHYLHTFLLTEANVDKTVILFCNRTSTADYLHHLLRMLEHRVTSLHSKLPQRQ 409
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R+ L +F+A IL+ TDVA+RGLDIP V +VINYD+P + DYIHRVGRTARAGR G
Sbjct: 410 RIDNLARFRASAARILVATDVAARGLDIPEVSLVINYDLPRDPDDYIHRVGRTARAGRKG 469
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-------LLERVTEAKRISQMTI 404
A+S V Q ++E L IEK +G+ + + EEE V L L+ V+E KR + + +
Sbjct: 470 EAVSFVGQRDVELALTIEKRVGRDMEAW--EEEGVNLETRVVRDALKLVSEKKREALLEV 527
Query: 405 KDS---GNKRRR 413
++ G KR+R
Sbjct: 528 EEGREVGGKRKR 539
>gi|255721753|ref|XP_002545811.1| hypothetical protein CTRG_00592 [Candida tropicalis MYA-3404]
gi|240136300|gb|EER35853.1| hypothetical protein CTRG_00592 [Candida tropicalis MYA-3404]
Length = 440
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 255/421 (60%), Gaps = 21/421 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELG+ L EA + + P+ IQ+ IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFNELGVAKWLSEALDAMKIYKPTSIQSACIPQILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ +E+ V F VL+PTRELA+QI+EQF ALGS ++++ +V+VGG D+++Q L
Sbjct: 62 ---QWSEDPYGV---FGLVLTPTRELALQIAEQFTALGSNMNIKVSVIVGGEDIVKQALE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
L K+PH V+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L +V+
Sbjct: 116 LQKKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLKRCFDVL 175
Query: 186 P--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ K PV ++E K + TL Y FVP+
Sbjct: 176 PPSEKRQTLLFTATITDAVRALKEKPQTEGKPPVFMHEVETVDKVAIPSTLSISYVFVPS 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + ++ +VF +L LR L R + M Q++R +
Sbjct: 236 YVKEAYLNSILNLEKFKDATAVVFVNRTITAEVLRRTLRKLDFRVASLHSEMPQAERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKAG ILI TDVASRGLDIP+V++V+N+DIP + D+IHRVGRTARAGR G A+S
Sbjct: 296 LHRFKAGAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAVS 355
Query: 356 LVNQYELEWYLQIEKLIGKK--LPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
++ + +++ IE+ I KK L E +++ + L T AKR S M + R+
Sbjct: 356 IIGEKDIDRIQSIEERINKKMELLEDVDDDKVIKDSLNVTTAAKRESMMEMDKENFGERK 415
Query: 414 K 414
K
Sbjct: 416 K 416
>gi|367016345|ref|XP_003682671.1| hypothetical protein TDEL_0G00930 [Torulaspora delbrueckii]
gi|359750334|emb|CCE93460.1| hypothetical protein TDEL_0G00930 [Torulaspora delbrueckii]
Length = 436
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 182/443 (41%), Positives = 256/443 (57%), Gaps = 28/443 (6%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E V TFK LGL LV+A + P+ IQ IP ++G D IG A+TGSGKT AFA
Sbjct: 3 ESSVSTFKSLGLPRWLVDALSAMRITQPTSIQKGCIPAIMKGGDCIGGAKTGSGKTIAFA 62
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
P+L E F VL+PTRELA+QI+EQF ALGS +++R +++VGG ++
Sbjct: 63 APMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSIVVGGESIV 116
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDE 180
+Q L L ++PH ++ATPGRL H+ N+ ++G L K+LVLDEAD LL F K L+
Sbjct: 117 KQALELQRKPHFIIATPGRLAHHILNSGEDTVGGLMRAKFLVLDEADSLLTSTFAKDLNV 176
Query: 181 ILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQY 232
++ +P RQT LF+AT+T +V+ LQ A K P+ ++E + TLK +Y
Sbjct: 177 CVSALPPKDKRQTLLFTATITDQVRALQDAPSQENKPPLYCYEVENVDNVAVPSTLKTEY 236
Query: 233 RFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
+P K+ YL ++LT E SS ++F ++ L+NL R + M Q
Sbjct: 237 ILIPEYVKEAYLYHLLTSEEYKDSSAIIFVNRTMTAEIMRRTLKNLDIRVASLHSQMPQQ 296
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
+R +L +F+A +LI TDVASRGLDIP V++V+NYDIP++ YIHR GRTARAGR
Sbjct: 297 ERTNSLQRFRANAARVLIATDVASRGLDIPVVELVVNYDIPSDPDVYIHRSGRTARAGRR 356
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL--LERVTEAKRISQMTIKDSG 408
G AIS + Q ++ IE I KK+ E + ++ L +VT+AKR S M ++
Sbjct: 357 GDAISFITQRDISRIEAIETRINKKMEECTLVGDTAVIRKSLNKVTKAKRESLMAMEKEN 416
Query: 409 NKRRRKGGDEDDDIGRQFGINKK 431
RRK I RQ +N+K
Sbjct: 417 FGERRK-------IQRQKNMNQK 432
>gi|163855229|ref|YP_001629527.1| ATP-dependent RNA helicase [Bordetella petrii DSM 12804]
gi|163258957|emb|CAP41256.1| putative ATP-dependent RNA helicase [Bordetella petrii]
Length = 476
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 162/377 (42%), Positives = 231/377 (61%), Gaps = 5/377 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
+ TF + GL +L+++ + G+ TP+ IQA+A+P + G+D++G AQTG+GKT AF
Sbjct: 13 DAPTSTFADFGLHPQLLQSVADTGYTTPTPIQAQALPAVMAGRDVMGAAQTGTGKTAAFT 72
Query: 64 LPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
LPIL L+ +A N PA +L+PTRELA Q+ E + LR AV+ GGV
Sbjct: 73 LPILHRLMPLA-NTSASPARHPVRTLILTPTRELADQVYESVKRYSKHTPLRSAVVFGGV 131
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D+ Q AL + I+VATPGRL+DH+ K +L + LVLDEADR+L+ F LD
Sbjct: 132 DIGPQKEALRRGCEILVATPGRLLDHVEQ-KTVNLSQVGILVLDEADRMLDMGFLPDLDR 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
I+ ++P RQ LFSAT + +++KL R L PV+IE A++ +T DT+ Q +P+ K
Sbjct: 191 IVRLLPAQRQGLLFSATFSNEIRKLGRTYLNQPVEIEVAARNATADTVSQIAYQMPSDAK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+V+++ +VF+ T T LA L G RA I G SQ+ R+ AL+ FK
Sbjct: 251 RAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVRAESIHGDKSQADRMKALDAFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L
Sbjct: 311 AGELEVLVATDVAARGLDVAGVPCVINYDLPHNAEDYVHRIGRTGRAGASGEAIALFTAD 370
Query: 361 ELEWYLQIEKLIGKKLP 377
E + IEKL + +P
Sbjct: 371 ETRYLQDIEKLTKRPVP 387
>gi|307721464|ref|YP_003892604.1| DEAD/DEAH box helicase [Sulfurimonas autotrophica DSM 16294]
gi|306979557|gb|ADN09592.1| DEAD/DEAH box helicase domain protein [Sulfurimonas autotrophica
DSM 16294]
Length = 423
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/370 (44%), Positives = 233/370 (62%), Gaps = 6/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F++LG+ L++A ++G+K P+ +Q AIP L KD+ AQTG+GKT AFALPILQ
Sbjct: 2 SFEKLGIFKPLLDAINDLGYKEPTLVQTRAIPLVLGKKDVFATAQTGTGKTAAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ + E++ A +LSPTREL+IQI E A + ++ +LVGG D+ +Q A
Sbjct: 62 KMRKHVESK----GVRAIILSPTRELSIQIYEDITAYSKYMDIKTTILVGGKDLQKQREA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K IV+ATPGRL++H+ N G SL ++ VLDEADR+L+ F K + +I ++P+
Sbjct: 118 LKKGTEIVIATPGRLLEHIEN--GLSLKDVEVFVLDEADRMLDMGFTKDIRKIHPLLPKR 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
QT LFSAT + KV+KL + L P IE A K +TVDT+ Q V K L Y++
Sbjct: 176 HQTLLFSATFSDKVRKLSKLILTKPAFIETAKKNTTVDTINQVAYLVDTVRKAELLAYLI 235
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VFTRT + L+ L+ G + I G +++ RL LN+FK G+ +L+
Sbjct: 236 GSRNFPQVLVFTRTKVSADALSEELKKDGLKCGVIHGDRTKANRLKTLNQFKEGKIRVLV 295
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRGLDI + VINY++P+ +DY+HRVGRT RAGR G AISL++ YE I
Sbjct: 296 ATDIASRGLDIEELPYVINYELPSIPEDYVHRVGRTGRAGREGEAISLIDIYEKYDIKDI 355
Query: 369 EKLIGKKLPE 378
EKLIG+K+P+
Sbjct: 356 EKLIGQKIPQ 365
>gi|342885803|gb|EGU85755.1| hypothetical protein FOXB_03603 [Fusarium oxysporum Fo5176]
Length = 539
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 186/432 (43%), Positives = 261/432 (60%), Gaps = 36/432 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L +R LV++ N+ K P+ IQ IP L+G+D IG ++TGSGKT AFA+PILQ
Sbjct: 109 TFSSLNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQ 168
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E A FA VL+PTRELA+QI EQF+A+ S SL+ ++ GG DM Q +
Sbjct: 169 KWSEDPT------AIFAIVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRTQAIE 222
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSL----DE 180
+GKRPH+++ATPGRL DH+ T G L ++Y+VLDEADRLLN + S+ +E
Sbjct: 223 IGKRPHVIIATPGRLADHI-RTSGEDTICGLRRVRYVVLDEADRLLNANGPGSMLPDVEE 281
Query: 181 ILNVIPRM--RQTYLFSATMTKKVKKLQRACLK---NPVKI-EAASKYSTVDT-LKQQYR 233
L+V+P RQT LF+AT+T +V+ L+ +K PV + E ++ + T LKQ Y
Sbjct: 282 CLSVLPPATERQTLLFTATITPEVRALKDMPIKPGKQPVFVCEVDTQTLAIPTTLKQMYI 341
Query: 234 FVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
P +K+ YL V++LTE + T++ F L +LR L R + + Q +
Sbjct: 342 KTPVTHKEHYLHVFLLTEANVDKTVILFCNRTSTADYLHHLLRMLNHRVTSLHSKLPQRQ 401
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R+ L +F+A IL+ TDVA+RGLDIP V +VINYD+P + DYIHRVGRTARAGR G
Sbjct: 402 RIDNLARFRASAARILVATDVAARGLDIPEVSLVINYDLPRDPDDYIHRVGRTARAGRKG 461
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-------LLERVTEAKRISQMTI 404
A+S V Q ++E L IEK +G+ + + EEE V L L+ V+E KR + + +
Sbjct: 462 EAVSFVGQRDVELALTIEKRVGRDMESW--EEEGVNLETRVVRDALKIVSEKKREALLEV 519
Query: 405 ---KDSGNKRRR 413
++ G KR+R
Sbjct: 520 EEGREVGGKRKR 531
>gi|311104225|ref|YP_003977078.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
gi|310758914|gb|ADP14363.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
Length = 493
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/381 (43%), Positives = 239/381 (62%), Gaps = 9/381 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL L+++ G+ TP+ IQA+AIP +EG+D++G AQTG+GKT AF LPIL
Sbjct: 18 TFTDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILH 77
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ +A N PA A +L+PTRELA Q+ E + LR AV+ GGVD+ Q
Sbjct: 78 RLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKRYSKQTPLRSAVVFGGVDIGPQ 136
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
AL + ++VATPGRL+DH+ K +L + LVLDEADR+L+ F L+ I+ ++
Sbjct: 137 KEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLL 195
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ LFSAT + +++KL R+ L +PV+IE A++ +T +T+ Q +P+ K +V
Sbjct: 196 PAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATANTITQIAYKMPSDAKRAAVV 255
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+++ + +VF+ T T LA L G +A I G +Q+ R+ AL FKAGE
Sbjct: 256 HLVKSRGLNQVIVFSNTKIGTARLARDLERDGVKAESIHGDKTQADRMKALEAFKAGELE 315
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L E +
Sbjct: 316 VLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTPDEERFL 375
Query: 366 LQIEKLIGKKLP----EFPAE 382
L IEKLI +++P + PAE
Sbjct: 376 LDIEKLIKREVPRGTLDVPAE 396
>gi|387792078|ref|YP_006257143.1| DNA/RNA helicase [Solitalea canadensis DSM 3403]
gi|379654911|gb|AFD07967.1| DNA/RNA helicase, superfamily II [Solitalea canadensis DSM 3403]
Length = 440
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 251/429 (58%), Gaps = 5/429 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL L D +++A ++ G+ P+ IQ ++IP AL+G+DL+G AQTG+GKT AF +PILQ
Sbjct: 2 TFNELNLIDPILKALQSEGYTQPTPIQEQSIPVALKGQDLLGCAQTGTGKTAAFTIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L I +++ A +L+PTRELAIQI E A G + L+ V+ GGV+ + QT+A
Sbjct: 62 LLHPIVRHEQGTTPIRALILTPTRELAIQIGESIAAYGKNLKLKHLVIFGGVNQLNQTVA 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L N K L +++ VLDEADR+L+ F + ++ +P
Sbjct: 122 LSKGVDILVATPGRLLD-LMNQKFIHLHKVQFFVLDEADRMLDMGFVNDVKRVIAKLPEK 180
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++L + L PVK+E ST +T+ Q V K L ++L
Sbjct: 181 RQTLFFSATMPPVIQQLADSILSKPVKVEVTPVSSTAETINQSVYMVDKGNKRALLTHLL 240
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VFT+T +A L +A I G SQ+ R AL+ FK+ + IL+
Sbjct: 241 ENDGIGSALVFTKTKHGADRIARDLNKHKIKAEAIHGDKSQNARQRALSNFKSKDIRILV 300
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + VIN+DIP ++ Y+HR+GRT RAG +G A++ + E+ + I
Sbjct: 301 ATDIAARGIDIDDLLHVINFDIPYEAETYVHRIGRTGRAGASGTALTFCDPEEMTYLKDI 360
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGI 428
KLIGK +P E+ + ++R E ++ Q T K + N+ ++G + + G G
Sbjct: 361 VKLIGKSIPT--VEDHPFPMTIQRYLEVQQ--QATDKKNDNRGSKRGFSHNKNRGGGQGH 416
Query: 429 NKKKLSKRK 437
+ KK RK
Sbjct: 417 SSKKQQHRK 425
>gi|255719254|ref|XP_002555907.1| KLTH0H00638p [Lachancea thermotolerans]
gi|238941873|emb|CAR30045.1| KLTH0H00638p [Lachancea thermotolerans CBS 6340]
Length = 433
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 247/420 (58%), Gaps = 21/420 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LG+ LVEA + + P+ IQ IP L+GKD IG A+TGSGKT AF P+L
Sbjct: 5 FATLGISKWLVEALQAMKITQPTAIQKACIPQILQGKDCIGGAKTGSGKTIAFGAPMLTK 64
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E F VL+PTRELA+QI+EQF ALGS +++R A++VGG ++ Q + L
Sbjct: 65 WSEDPS------GMFGVVLTPTRELAMQIAEQFTALGSSMNIRVALVVGGESIVDQAINL 118
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVIP 186
++PH +VATPGR+ H+ N+ ++G LK +LVLDEAD LL D F + L ++++P
Sbjct: 119 QRKPHFIVATPGRMAHHIMNSGEDTIGGLKRAKFLVLDEADILLTDTFSEHLATCISILP 178
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T +VK LQ A K P+ ++E+ K + TLK Y VP +
Sbjct: 179 PKEKRQTLLFTATVTDQVKALQNAPAAEGKPPLFSYEVESMDKVAIPSTLKTTYLLVPEQ 238
Query: 239 YKDCYLVYILTEVS--ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL ILT + SS ++F +L L+ L R + M Q +R +L
Sbjct: 239 VKEAYLYQILTNATYNESSAIIFVNRTVTAEILRRTLKQLDVRVASLHSQMPQQERTNSL 298
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++F+A +LI TDVASRGLDIP+V +VINYDI +N +IHR GRTARAGR+G +I
Sbjct: 299 HRFRANAARVLIATDVASRGLDIPTVQLVINYDISSNPDTFIHRAGRTARAGRSGESICF 358
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIKDSGNKRRRK 414
V ++ IE+ I KK+ EF + ++ L +VT AKR S M+++ RRK
Sbjct: 359 VAPRDVSRIEAIEERINKKMEEFKDVHDTAVIRKALNKVTVAKRESLMSMEKENFGERRK 418
>gi|366994109|ref|XP_003676819.1| hypothetical protein NCAS_0E03920 [Naumovozyma castellii CBS 4309]
gi|342302686|emb|CCC70462.1| hypothetical protein NCAS_0E03920 [Naumovozyma castellii CBS 4309]
Length = 437
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/429 (42%), Positives = 255/429 (59%), Gaps = 23/429 (5%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M+E K TFK LGL L EA + + P+ IQ IP L+G+D IG A+TGSGKT
Sbjct: 1 MSEIKNA-TFKSLGLSRWLQEALQAMKINQPTAIQKACIPEILKGRDCIGGAKTGSGKTV 59
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFA P+L E F VL+PTRELA+QI+EQF ALGS +++R A++VGG
Sbjct: 60 AFAAPMLTKWSEDPSG------MFGVVLTPTRELAMQIAEQFTALGSSMNIRVALVVGGE 113
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKS 177
++ Q + L K+PH ++ATPGRL H+ ++ ++G LK +LVLDEAD LL D F
Sbjct: 114 SIVDQAIQLQKKPHFIIATPGRLAHHIMSSGEDTIGGLKRAKFLVLDEADSLLTDTFASD 173
Query: 178 LDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLK 229
L + +P RQT LF+AT+T +V+ L+ A + K P+ ++E+ K + TLK
Sbjct: 174 LATCIGALPSKDKRQTLLFTATITDQVRALEDAPIQEGKPPLFTYQVESVDKVAIPSTLK 233
Query: 230 QQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHM 287
+Y VP K+ YL +LT SS ++F +L L +L R + M
Sbjct: 234 TEYILVPEHVKEAYLYQLLTCETYKDSSAIIFVNRTMTAEILRRTLYHLEVRVASLHSQM 293
Query: 288 SQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARA 347
Q +R +L++F+A +LI TDVASRGLDIP+V++VINYDIP + +IHR GRTARA
Sbjct: 294 PQQERTNSLHRFRANVARVLIATDVASRGLDIPTVELVINYDIPADPDTFIHRAGRTARA 353
Query: 348 GRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTI- 404
GR+G AIS V Q ++ IEK I KK+ E + ++ L +VT+AKR S M +
Sbjct: 354 GRSGDAISFVTQRDVSRIEAIEKRINKKMTESDKVHDTAVIRKALTKVTKAKRESLMAME 413
Query: 405 KDSGNKRRR 413
K++ +R+R
Sbjct: 414 KENFGERKR 422
>gi|398398659|ref|XP_003852787.1| ATP-dependent RNA helicase dbp8 [Zymoseptoria tritici IPO323]
gi|339472668|gb|EGP87763.1| hypothetical protein MYCGRDRAFT_92934 [Zymoseptoria tritici IPO323]
Length = 503
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 260/444 (58%), Gaps = 34/444 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK +G+ L+ + ++ K P++IQ IP L G+D IG ++TGSGKT AF LPILQ
Sbjct: 72 SFKSIGVDPWLIASLSHLSIKFPTRIQKACIPEILAGRDCIGGSRTGSGKTIAFGLPILQ 131
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ R FA VL+PTRELA+QI EQF+A+G G ++C ++ GG M Q L
Sbjct: 132 ------QWARQPSGIFALVLTPTRELALQIYEQFQAIGGGQGIKCVLVTGGAHMRNQALE 185
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYLVLDEADRLLNDDFEKSL----DEI 181
L KRPHIV+ATPGRL DH++++ + L K++VLDEADRLL + S+ +
Sbjct: 186 LAKRPHIVIATPGRLADHISSSGEDTIYGLRKCKFVVLDEADRLLASSKKGSMLPDVETC 245
Query: 182 LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPVKIEAAS--KYSTVDTLKQQYRF 234
++++P RQT LF+AT+T +V+ L+ R+ + PV I + DTL Q Y+
Sbjct: 246 MSILPPASSRQTCLFTATITPEVRALKSAPRSPSRPPVFISEVDVDSLAIPDTLTQTYQL 305
Query: 235 VPAKYKDCYL-VYILT-EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 292
V +K+ YL + +LT E +T++FT + LL LR L R + + +R
Sbjct: 306 VNVLHKEKYLHILLLTPENVTKTTIIFTNRTETANLLEHTLRLLTHRVTALHSALPHEQR 365
Query: 293 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 352
L +F+AG IL+ TDVASRGLD+P V +VINYDIP N DYIHRVGRTARAGR G+
Sbjct: 366 TSNLARFRAGAARILVATDVASRGLDVPDVGLVINYDIPRNPDDYIHRVGRTARAGRKGL 425
Query: 353 AISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
+ISLV Q ++E IE +G+K+ F EEE V + E + + + + G K+R
Sbjct: 426 SISLVGQRDVELVQGIEARVGRKMEVF--EEEGVSV------EGRVVRSEVLNEVGGKKR 477
Query: 413 RK--GGDEDDDI--GRQFGINKKK 432
+E D+ R G+ KK+
Sbjct: 478 EAMLAIEEGRDVKGNRSKGMGKKR 501
>gi|304671|gb|AAA16339.1| DEAD-box protein [Drosophila melanogaster]
gi|313850|emb|CAA80804.1| DEAD-box protein [Drosophila melanogaster]
Length = 527
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 257/447 (57%), Gaps = 28/447 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR LV+ +G K + IQ + IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEAD +LN DF++SL I
Sbjct: 116 MVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADPMLNGDFDESLSIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + C + AS TV+TL Y V A
Sbjct: 176 RCLPKTRQNLFFSATMKDFIKESSIFPIASDCF----EWCEASAVRTVETLDHGY-LVSA 230
Query: 238 KYK-DCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 292
Y D L+ L E ++ M+FT T +LL++ L+N+ + + G M Q +R
Sbjct: 231 DYDPDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKER 290
Query: 293 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 352
+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YIHRVGRTARAGR G+
Sbjct: 291 VAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHILPRTPKEYIHRVGRTARAGRKGM 350
Query: 353 AISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD----- 406
+IS+ +LE IE+ I KL E P ++ V + +V +R S+M + +
Sbjct: 351 SISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNCFDE 410
Query: 407 -SGNKRRRKGGDEDDDIGRQFGINKKK 432
+ N RR+ E D + + +KK
Sbjct: 411 RAQNYRRKTWIMEGKDPDQMEALYRKK 437
>gi|404448789|ref|ZP_11013781.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
gi|403765513|gb|EJZ26391.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
Length = 398
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 229/368 (62%), Gaps = 4/368 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F L L + +++A G+ TP+ IQ +AIP L+G DL+G AQTG+GKT AF++PI+Q
Sbjct: 3 FNNLPLIEPILKAVAQEGYTTPTPIQQKAIPLVLDGNDLLGCAQTGTGKTAAFSIPIIQL 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + +++ P A +L+PTRELAIQI+E + G +R V+ GGV + QT AL
Sbjct: 63 L---STQKQSRPGIKALILTPTRELAIQINESLASYGKFTKIRHTVIFGGVSQLHQTNAL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I+VATPGRL+D L N K L L+ VLDEADR+L+ F + +++N+IP R
Sbjct: 120 KRGVDILVATPGRLLD-LINQKYIDLRHLEIFVLDEADRMLDMGFIHDVKKLINIIPTKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT FSATM +++KL LKNP +E STV+ + Q+ F K L+++L
Sbjct: 179 QTLFFSATMPSEIQKLADTLLKNPKYVEVTPPSSTVEKITQKLYFTNKNDKAKLLIHLLE 238
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ + S +VF RT + + +L+ G +A I G+ SQ+ R ALN FK G+ IL+
Sbjct: 239 KENIGSALVFGRTKHGSDKVVKLLQREGIKAAAIHGNKSQNARQNALNDFKNGKIRILVA 298
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + V NYD+P + Y+HR+GRT RAG +GVAIS +Q ++ Y IE
Sbjct: 299 TDIAARGIDIDELATVFNYDLPNIPETYVHRIGRTGRAGNSGVAISFADQDTMKEYRDIE 358
Query: 370 KLIGKKLP 377
KLIG K+P
Sbjct: 359 KLIGIKIP 366
>gi|344303887|gb|EGW34136.1| hypothetical protein SPAPADRAFT_59553 [Spathaspora passalidarum
NRRL Y-27907]
Length = 431
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 255/415 (61%), Gaps = 21/415 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ L E+ + P+ IQ IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFSDLGVAKWLSESLIAMKIHQPTPIQTACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ + + R + F +L+PTRELA+QI+EQF ALGS ++++ +V+VGG D++ Q LA
Sbjct: 62 ---DWSADPRGI---FGLILTPTRELALQIAEQFAALGSNMNIKVSVIVGGEDIVTQALA 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVI 185
L + PH V+ATPGRL DH+ N+ ++ LK YLVLDEADRLL++ F L+ VI
Sbjct: 116 LQRNPHFVIATPGRLADHVLNSGEETVAGLKRVKYLVLDEADRLLSNSFSSDLERCFKVI 175
Query: 186 PRM--RQTYLFSATMTKKVKKLQRACLKN---PV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ A K PV ++E K + ++L +Y FVP+
Sbjct: 176 PSSENRQTLLFTATVTDAVRALKDAPAKEGKLPVFMHEVETVDKVAIPNSLSIKYVFVPS 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL+ + + ++F ++ LR L R + M Q++R+ +
Sbjct: 236 YVKEAYLHSILSLEQYKDKTAVIFVNRTITAEVICRTLRKLEFRVASLHSQMRQTERINS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKAG ILI TDVASRGLDIPSV++V+N+DIP + D+IHRVGRTARAGR G A+S
Sbjct: 296 LHRFKAGAARILIATDVASRGLDIPSVELVVNFDIPADPDDFIHRVGRTARAGRKGDAVS 355
Query: 356 LVNQYELEWYLQIEKLIGK--KLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
+V + ++E IE+ I K +L E +++ + L V+ AKR S M + G
Sbjct: 356 IVGEKDVERIHAIEERIVKTMELLEGVSDDRIIKESLTAVSTAKRESMMEMDKQG 410
>gi|160888927|ref|ZP_02069930.1| hypothetical protein BACUNI_01347 [Bacteroides uniformis ATCC 8492]
gi|270293944|ref|ZP_06200146.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|423306019|ref|ZP_17284018.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|423309437|ref|ZP_17287427.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
gi|156861394|gb|EDO54825.1| DEAD/DEAH box helicase [Bacteroides uniformis ATCC 8492]
gi|270275411|gb|EFA21271.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|392679863|gb|EIY73240.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|392684477|gb|EIY77802.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
Length = 425
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/369 (44%), Positives = 228/369 (61%), Gaps = 5/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A + G+ TP+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALQEEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +N++++ A +L+PTRELAIQI E F A G LR AV+ GGV QT
Sbjct: 62 KLYK-TDNRKSIKAL---ILTPTRELAIQIGESFSAYGKYTGLRHAVIFGGVGQKPQTDE 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL D L N +L L++ VLDEADR+L+ F + IL ++P
Sbjct: 118 LKRGVQILVATPGRLQD-LVNQGFINLKALEFFVLDEADRMLDMGFIHDIRRILKLLPAK 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++ L + L +P K+E STVDT+ Q FV K K L+++L
Sbjct: 177 RQTLFFSATMPPEIETLANSMLTHPEKVEVTPASSTVDTISQSVYFVEKKEKKDLLIHLL 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S ++FTRT LA L G RA I G+ SQ+ R AL FK E +LI
Sbjct: 237 KNPAIKSVLIFTRTKYGADKLARTLSKSGIRAEAIHGNKSQNARQRALTGFKNHELRVLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG G+A+S EL + I
Sbjct: 297 ATDIAARGIDVDQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDI 356
Query: 369 EKLIGKKLP 377
+KLIGK +P
Sbjct: 357 QKLIGKSIP 365
>gi|121606092|ref|YP_983421.1| DEAD/DEAH box helicase [Polaromonas naphthalenivorans CJ2]
gi|120595061|gb|ABM38500.1| DEAD/DEAH box helicase domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 487
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 243/410 (59%), Gaps = 14/410 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G++T + IQ +AIP L+GKD++G AQTG+GKT AFALP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFALPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+++ EN T PA A VL PTRELA+Q++EQ + +L AV+ GG+DM Q
Sbjct: 64 RMMK-HENASTSPARHPVRALVLLPTRELAVQVAEQVKLYAKYTNLNSAVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNTVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L++PV IE A +T T++Q + V A K L
Sbjct: 182 PKQRITLLFSATFSPEIKRLAASFLQDPVTIEVARSNATAATVEQHFYSVGADDKRRALH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
IL VF + LA L G + + G SQ +RL AL FK+GE +
Sbjct: 242 QILKARDLKQAFVFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALESFKSGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A+S V +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVSFVAASDQRLV 361
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
IEKLI K+ P E EE + RIS+ + G + R+G
Sbjct: 362 TDIEKLIKTKIEIEPMEFEE---------DTPRISEQGRINDGRRMYREG 402
>gi|390945021|ref|YP_006408782.1| DNA/RNA helicase [Belliella baltica DSM 15883]
gi|390418449|gb|AFL86027.1| DNA/RNA helicase, superfamily II [Belliella baltica DSM 15883]
Length = 406
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 229/368 (62%), Gaps = 4/368 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK L L + +++A N G+ TP+ IQ +AIP LE +DL+G AQTG+GKT AF++PI+Q
Sbjct: 3 FKNLNLIEPILKALVNEGYTTPTPIQQKAIPLVLEQRDLLGCAQTGTGKTAAFSIPIIQ- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL + + +R P A +L+PTRELAIQI E A G ++ V+ GGV + QT AL
Sbjct: 62 LLALQKQRR--PGIKALILTPTRELAIQIDESIAAYGKFTDIKHTVIFGGVSQLHQTNAL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I+VATPGRL+D L N K L L++ VLDEADR+L+ F + +I+ ++P R
Sbjct: 120 KRGVDILVATPGRLLD-LINQKFIDLRQLQFFVLDEADRMLDMGFIHDVKKIIALLPAKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT FSATM +++KL L+NP K+E STVD + Q+ + K L ++L
Sbjct: 179 QTLFFSATMPPEIQKLADVLLRNPSKVEVTPPSSTVDKIDQRLYYTNKNDKPKLLQHLLD 238
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ +VFTRT + L G RA I G+ SQ+ R AL FKAG+ +L+
Sbjct: 239 AYRIRTALVFTRTKHGADKVVKFLARDGVRAAAIHGNKSQNARQNALKDFKAGKLQVLVA 298
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VINYD+P S+ Y+HR+GRT RAG TG+AIS+ ++ + + IE
Sbjct: 299 TDIAARGIDIDELAHVINYDLPNVSETYVHRIGRTGRAGNTGIAISICDEEQRKELKDIE 358
Query: 370 KLIGKKLP 377
KLIGK +P
Sbjct: 359 KLIGKDIP 366
>gi|319902651|ref|YP_004162379.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417682|gb|ADV44793.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 422
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/369 (43%), Positives = 226/369 (61%), Gaps = 5/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A + G+ TP+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLKLIEPILKALQEEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +N++ + A +L+PTRELAIQI E FEA G L+ V+ GGV QT
Sbjct: 62 KLYK-TDNRKGIKAL---ILTPTRELAIQIGESFEAYGKYTGLKHTVIFGGVGQKPQTDD 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I++ATPGRL D L N +L TL + VLDEADR+L+ F + IL ++P
Sbjct: 118 LKRGTQILIATPGRLQD-LVNQGFINLKTLDFFVLDEADRMLDMGFIHDIRRILKMLPTQ 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++ L + L NP K+E STVDT+ Q FV K K L+++L
Sbjct: 177 RQTLFFSATMPSEIETLANSMLSNPAKVEVTPVSSTVDTISQSVYFVEKKEKKDLLIHLL 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VFTRT LA +L G A I G+ SQ+ R AL FK+ +LI
Sbjct: 237 KNTAIESVLVFTRTKYGADKLARILSKSGISAEAIHGNKSQNARQRALTGFKSHTIRVLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG G A+S EL + I
Sbjct: 297 ATDIAARGIDVEQLSHVINYELPNVPETYVHRIGRTGRAGHEGTALSFCESEELPYLKDI 356
Query: 369 EKLIGKKLP 377
+KLIGK +P
Sbjct: 357 QKLIGKTIP 365
>gi|332285242|ref|YP_004417153.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
gi|330429195|gb|AEC20529.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
Length = 455
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 229/372 (61%), Gaps = 5/372 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL +++A G+ TP+ IQA+A+P ++G+D++G AQTG+GKT AF LPIL
Sbjct: 13 TFSDFGLHPSVLQAVTETGYTTPTPIQAQAMPMVMDGRDVMGAAQTGTGKTAAFTLPILH 72
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L++ A N PA A +L+PTRELA Q+++ LR V+ GGVD+ Q
Sbjct: 73 RLMQFA-NTSASPARHPVRALILTPTRELADQVADSVTTYAKFTPLRSTVVFGGVDIGPQ 131
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
AL + I++ATPGRL+DH+ K +L + LVLDEADR+L+ F LD I+ ++
Sbjct: 132 RDALRRGCEILIATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLDRIVRLL 190
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ LFSAT + +++KL R+ L NP +IE A++ +T DT+ Q + K +V
Sbjct: 191 PAKRQGLLFSATFSNEIRKLGRSYLSNPAEIEVAARNATADTVTQIAYPLAGSDKRAAVV 250
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+++ + +VF+ T T LA L G +A I G SQ R+ AL+ FKAGE
Sbjct: 251 HLVKSRGFNQVIVFSNTKIGTSRLARELVRDGVKAESIHGDKSQLDRMKALDAFKAGELE 310
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG TG AI+ E +
Sbjct: 311 VLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGNTGEAIAFFTPEEERYL 370
Query: 366 LQIEKLIGKKLP 377
L IEKLI K+P
Sbjct: 371 LDIEKLIKAKIP 382
>gi|6321963|ref|NP_012039.1| ATP-dependent RNA helicase DBP8 [Saccharomyces cerevisiae S288c]
gi|731740|sp|P38719.1|DBP8_YEAST RecName: Full=ATP-dependent RNA helicase DBP8; AltName: Full=DEAD
box protein 8
gi|160380633|sp|A6ZT77.1|DBP8_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP8; AltName: Full=DEAD
box protein 8
gi|458901|gb|AAB68014.1| Yhr169wp [Saccharomyces cerevisiae]
gi|151944115|gb|EDN62408.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
gi|207344531|gb|EDZ71646.1| YHR169Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273978|gb|EEU08896.1| Dbp8p [Saccharomyces cerevisiae JAY291]
gi|259146927|emb|CAY80183.1| Dbp8p [Saccharomyces cerevisiae EC1118]
gi|285810075|tpg|DAA06862.1| TPA: ATP-dependent RNA helicase DBP8 [Saccharomyces cerevisiae
S288c]
gi|323308784|gb|EGA62022.1| Dbp8p [Saccharomyces cerevisiae FostersO]
gi|323337360|gb|EGA78613.1| Dbp8p [Saccharomyces cerevisiae Vin13]
gi|323348321|gb|EGA82570.1| Dbp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354703|gb|EGA86538.1| Dbp8p [Saccharomyces cerevisiae VL3]
gi|349578721|dbj|GAA23886.1| K7_Dbp8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765263|gb|EHN06775.1| Dbp8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 431
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 252/428 (58%), Gaps = 23/428 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL L E+ + P+ IQ IP LEG+D IG A+TGSGKT AFA P+L
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E F VL+PTRELA+QI+EQF ALGS +++R +V+VGG ++QQ L L
Sbjct: 64 WSEDPS------GMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVIP 186
++PH ++ATPGRL H+ ++ ++G L KYLVLDEAD LL F L ++ +P
Sbjct: 118 QRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALP 177
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T +VK LQ A + K P+ ++E+ + TLK +Y VP
Sbjct: 178 PKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEH 237
Query: 239 YKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL +LT E + ++F +L L+ L R + M Q +R +L
Sbjct: 238 VKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSL 297
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++F+A ILI TDVASRGLDIP+V++V+NYDIP++ +IHR GRTARAGR G AIS
Sbjct: 298 HRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISF 357
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIK--DSGNKRR 412
V Q ++ IE I KK+ E + ++ L +VT+AKR S M ++ + G ++R
Sbjct: 358 VTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKALTKVTKAKRESLMAMQKENFGERKR 417
Query: 413 RKGGDEDD 420
++ ++D
Sbjct: 418 QQKKKQND 425
>gi|365760297|gb|EHN02027.1| Dbp8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 437
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 253/429 (58%), Gaps = 22/429 (5%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M+E + FK LGL L E+ + + P+ IQ IP LEG+D IG A+TGSGKT
Sbjct: 1 MSELSKTTDFKSLGLSKWLTESLKAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTI 60
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFA P+L E F VL+PTRELA+QI+EQF ALGS +++R +V+VGG
Sbjct: 61 AFAGPMLTKWSE------DPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVVVGGE 114
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKS 177
++QQ LAL ++PH ++ATPGRL H+ ++ ++G L KYLVLDEAD LL F
Sbjct: 115 SIIQQALALQRKPHFIIATPGRLAHHIMSSGEDTVGGLMRAKYLVLDEADILLTSTFADH 174
Query: 178 LDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLK 229
L + +P RQT LF+AT+T +V+ LQ A + K P+ ++E+ + TLK
Sbjct: 175 LATCIGALPAKDKRQTLLFTATITDQVRSLQDAPVQEGKPPLFAYQVESVDNVAIPSTLK 234
Query: 230 QQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHM 287
+Y VP K+ YL +LT E + ++F +L L+ L R + M
Sbjct: 235 TEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQM 294
Query: 288 SQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARA 347
Q +R +L++F+A +LI TDVASRGLDIP+V++V+NYDIP++ +IHR GRTARA
Sbjct: 295 PQQERTNSLHRFRANAARVLIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARA 354
Query: 348 GRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTI- 404
GR G AIS V Q ++ IE I KK+ E + ++ L +VT+AKR S M +
Sbjct: 355 GRNGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKALTKVTKAKRESLMAMQ 414
Query: 405 KDSGNKRRR 413
K++ +R+R
Sbjct: 415 KENFGERKR 423
>gi|195120383|ref|XP_002004708.1| GI20069 [Drosophila mojavensis]
gi|193909776|gb|EDW08643.1| GI20069 [Drosophila mojavensis]
Length = 521
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 183/434 (42%), Positives = 253/434 (58%), Gaps = 22/434 (5%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ K+ F +LGLR L + +G K + IQ IP L GKD IG A+TGSGKT AF
Sbjct: 2 QRKDPNPFLKLGLRPWLAKQLTKLGLKGVTPIQENCIPPILAGKDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LK+LV+DEADR+LN DF++SL I
Sbjct: 116 MIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKFLVVDEADRMLNGDFDESLAIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+P+ RQ FSATM +K+ + K+ ++ S +TV+TL+Q+Y +D
Sbjct: 176 RCLPKTRQNLFFSATMKDFMKESSIFPISKDLMEWSQESDVATVETLEQRYLLCADYDRD 235
Query: 242 CYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
L+ L E ++ M+FT T +LL++ L ++ + + G M Q +R+ AL+
Sbjct: 236 MVLIEALRKFREENENANVMIFTNTKKYCQLLSMTLASMEIENVCLHGFMRQKERVAALS 295
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FK+ LI TDVA+RGLDIPSV +VIN+ +P K+YIHRVGRTARAGR G+AIS+
Sbjct: 296 RFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGLAISIF 355
Query: 358 N-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG------NK 410
+LE IE I KL E P ++ V + +V +R S+M + ++ N
Sbjct: 356 RFPRDLELLGAIEAEINCKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDERAQNY 415
Query: 411 RRR----KGGDEDD 420
RR+ +G D D+
Sbjct: 416 RRKTWIMEGKDPDE 429
>gi|398803769|ref|ZP_10562787.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
gi|398096022|gb|EJL86353.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
Length = 481
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 243/412 (58%), Gaps = 14/412 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G++T + IQ +AIP L+GKD++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+++ EN T PA A VL PTRELA+Q+++Q E +LR V+ GG+DM Q
Sbjct: 64 RMMK-HENPSTSPARHPVRALVLLPTRELAVQVAQQVELYAKYTNLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TAELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L++PV IE A +T T++Q + V A K L
Sbjct: 182 PKQRITLLFSATFSPEIKRLASSYLQDPVTIEVARSNATASTVEQHFYSVGADDKRRALH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
IL E VF + LA L G + + G SQ +RL AL FK GE +
Sbjct: 242 QILKERGMKQAFVFVNSKLGCARLARSLEREGLKTAALHGDKSQDERLKALEAFKKGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A+S V +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVSFVASSDNRLV 361
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD 417
IEKLI K+ P E EE R+ E RI + G + R+G D
Sbjct: 362 ADIEKLIKTKIELEPLEFEED---RPRIKEQGRI------NDGRRMYREGED 404
>gi|323333197|gb|EGA74596.1| Dbp8p [Saccharomyces cerevisiae AWRI796]
Length = 431
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 252/428 (58%), Gaps = 23/428 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL L E+ + P+ IQ IP LEG+D IG A+TGSGKT AFA P+L
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E F VL+PTRELA+QI+EQF ALGS +++R +V+VGG ++QQ L L
Sbjct: 64 WSEDPS------GMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVIP 186
++PH ++ATPGRL H+ ++ ++G L KYLVLDEAD LL F L ++ +P
Sbjct: 118 QRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALP 177
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T +VK LQ A + K P+ ++E+ + TLK +Y VP
Sbjct: 178 PKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEH 237
Query: 239 YKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL +LT E + ++F +L L+ L R + M Q +R +L
Sbjct: 238 VKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSL 297
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++F+A ILI TDVASRGLDIP+V++V+NYDIP++ +IHR GRTARAGR G AIS
Sbjct: 298 HRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISF 357
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIK--DSGNKRR 412
V Q ++ IE I KK+ E + ++ L +VT+AKR S M ++ + G ++R
Sbjct: 358 VTQRDVSRIQAIEDRINKKMTEANKVHDTAVIRKALTKVTKAKRESLMAMQKENFGERKR 417
Query: 413 RKGGDEDD 420
++ ++D
Sbjct: 418 QQKKKQND 425
>gi|387592705|gb|EIJ87729.1| hypothetical protein NEQG_02276 [Nematocida parisii ERTm3]
gi|387595334|gb|EIJ92959.1| hypothetical protein NEPG_02358 [Nematocida parisii ERTm1]
Length = 427
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 242/408 (59%), Gaps = 9/408 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M EEK KTF L LVE G P++IQ + + + L+ ++ TG+GKT
Sbjct: 1 MQEEK--KTFSSYSLDSSLVEELTKRGIIHPTEIQKLTLSNLENRQSLLAISNTGTGKTL 58
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
A++LPIL +LL + R F+A ++ PTREL+ Q+ +G+ I LR +L+G V
Sbjct: 59 AYSLPILHSLLN---DDR---YFYAMIILPTRELSQQVHAVLSDIGAEIGLRTTLLIGAV 112
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D++ Q +L RPHI++ TPGR+ HL NTKG +L + KYLVLDE DRLL++DF+ ++
Sbjct: 113 DLLVQGKSLAARPHIIIGTPGRIYHHLRNTKGITLSSFKYLVLDECDRLLDNDFDGDING 172
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL +I + +LFSAT+TK+V + + NP+ + + QQY ++P KYK
Sbjct: 173 ILELISP-KYIFLFSATLTKRVNAFKNKRMNNPLLYNVQKDEGIPENISQQYVYLPQKYK 231
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+ YL I+ + + +VF +TC + MLR+L + I G+ SQ R + F+
Sbjct: 232 EVYLYSIIRSLGSRKCIVFVKTCITAEKIERMLRSLDESVCSIHGNKSQEVRTETIEMFR 291
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G ++LI TDV +RG+D+ + ++INYD+P K+YIHR+GRT RAG TG +I+LV QY
Sbjct: 292 RGRYSVLISTDVVARGMDMEGIKIIINYDMPDGHKEYIHRIGRTGRAGETGSSITLVTQY 351
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
++E + ++E + K+ E+ + + L + V AK+ + + +K+ G
Sbjct: 352 DVEEFRKLEVKLDLKMDEYSISSDLIYSLSDSVDHAKKEAAVDMKEEG 399
>gi|399927884|ref|ZP_10785242.1| Superfamily II DNA and RNA helicase [Myroides injenensis M09-0166]
Length = 371
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/373 (42%), Positives = 229/373 (61%), Gaps = 4/373 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L + +++A + VG+ TP+ IQ +AIP L+GKD+IG AQTG+GKTGAFA+PIL+
Sbjct: 3 FKDLSISSPILQAIQEVGYTTPTAIQVQAIPPILQGKDIIGCAQTGTGKTGAFAIPILEG 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL +++ V VL PTRELA+Q+ + F+ +++ L GGV + Q AL
Sbjct: 63 LLNKQTSKKVVETL---VLVPTRELALQVEKSFKDYSKHTAIKTIALFGGVALPPQIKAL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ P IV+ATPGRL+D L K S+ + LVLDEAD++L+ F + ++L+ +P+ R
Sbjct: 120 KQNPKIVIATPGRLLD-LIQQKLVSISNISTLVLDEADQMLDMGFIHDIKKVLSYVPKKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT FSATM ++K R L P+K+E A+K T + Q FV + K L IL
Sbjct: 179 QTLFFSATMPAAIEKFARTILYQPIKVEVAAKTLTAKKVAQSVYFVNQEDKKKVLHTILK 238
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ + T++FTRT L L+ +G ++ I G+ SQ+ R+ ALN FK NILI
Sbjct: 239 NNAETQTLIFTRTKHGANNLVKYLQKVGLNSVAIHGNKSQNARVAALNNFKNNSINILIA 298
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VINY+IP + Y+HR+GRT RAG +G A+SL + E + L I+
Sbjct: 299 TDIAARGIDIDKLPFVINYEIPNVPETYVHRIGRTGRAGLSGEAVSLCSPQEKKDLLNIQ 358
Query: 370 KLIGKKLPEFPAE 382
KL G KL +E
Sbjct: 359 KLTGVKLQVISSE 371
>gi|375357970|ref|YP_005110742.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|301162651|emb|CBW22198.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
Length = 427
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/370 (44%), Positives = 226/370 (61%), Gaps = 7/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A G+ +P+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + A VL+PTRELAIQI E FEA G L+ AV+ GGV QT A
Sbjct: 62 KLYKTDHRK----GIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L I+VATPGRL+D ++ +GF SL +L + VLDEADR+L+ F + IL ++P
Sbjct: 118 LRSGIQILVATPGRLLDLIS--QGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPA 175
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSATM +++ L + L P K+E STVD + QQ FV K K L+++
Sbjct: 176 RRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASSTVDIISQQVYFVEKKEKKDLLIHL 235
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S S ++FTRT LA +L G A I G+ +Q+ R AL FK L
Sbjct: 236 LKDTSIESVLIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRAL 295
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG GVAIS EL +
Sbjct: 296 IATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKD 355
Query: 368 IEKLIGKKLP 377
I+KLIGKK+P
Sbjct: 356 IQKLIGKKIP 365
>gi|425768778|gb|EKV07293.1| ATP dependent RNA helicase (Dbp8), putative [Penicillium digitatum
Pd1]
gi|425770200|gb|EKV08673.1| ATP dependent RNA helicase (Dbp8), putative [Penicillium digitatum
PHI26]
Length = 520
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 188/451 (41%), Positives = 267/451 (59%), Gaps = 43/451 (9%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ TF EL + LV + + K P+ IQ IP L+GKD IG ++TGSGKT AFA+PI
Sbjct: 89 LSTFAELDVAPWLVSSLTAMAIKRPTAIQKACIPEILKGKDCIGGSRTGSGKTMAFAVPI 148
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+Q + R +A VL+PTRELA+QI EQF A+ + +++ ++VGGVDM QQ
Sbjct: 149 MQ------QWARNPFGIYALVLTPTRELALQIYEQFRAVSAPQNMKPILVVGGVDMRQQA 202
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGF----SLGTLKYLVLDEADRLLNDDFEKSLDEI- 181
+ L RPH+V+ATPGRL DH+ T G L +K +VLDEADRLL L ++
Sbjct: 203 IELANRPHVVIATPGRLADHI-KTSGVDTVAGLRRVKMVVLDEADRLLASGPGSMLPDVE 261
Query: 182 --LNVIPRM--RQTYLFSATMTKKVKKLQR---ACLKNPV---KIEAASKYSTVDTLKQQ 231
L +P RQT LF+ATMT +V+ L+ A K P+ +I ++ TLKQ
Sbjct: 262 TCLGALPPSAERQTLLFTATMTAEVRALKSMPAAGNKPPIFTTEIGTENQGKIPPTLKQT 321
Query: 232 YRFVPAKYKDCYLVYIL-TEVSASSTMV----FTRTCDATRLLALMLRNLGQRAIPISGH 286
Y VP +++ +L +L TEV+ + ++ T+TCD LL LR LG R +
Sbjct: 322 YLKVPMTHREAFLHALLSTEVNVTKPVIVFCNHTKTCD---LLERTLRRLGHRITSLHSI 378
Query: 287 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 346
+ QS+R L +F+A +L+ TDVASRGLDIPSV++VIN+D+P N DY+HRVGRTAR
Sbjct: 379 LPQSERTANLARFRATAARVLVATDVASRGLDIPSVELVINFDVPRNPDDYVHRVGRTAR 438
Query: 347 AGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
AGR+G A +LV Q ++E L IE+ +G+++ EF E+E V + E++ + +K+
Sbjct: 439 AGRSGEATTLVGQRDVELVLAIEERVGRQMEEF--EQEGVNI------ESRVVRTGLLKE 490
Query: 407 SGNKRRRKGG--DEDDDIGRQFGINKKKLSK 435
G+ +R G DE DI G + KL K
Sbjct: 491 VGSAKREAAGEIDEGRDI---LGRKRNKLKK 518
>gi|392298981|gb|EIW10076.1| Dbp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 431
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 252/428 (58%), Gaps = 23/428 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL L E+ + P+ IQ IP LEG+D IG A+TGSGKT AFA P+L
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E F VL+PTRELA+QI+EQF ALGS +++R +V+VGG ++QQ L L
Sbjct: 64 WSEDPS------GMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVIP 186
++PH ++ATPGRL H+ ++ ++G L KYLVLDEAD LL F L ++ +P
Sbjct: 118 QRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALP 177
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T +VK LQ A + K P+ ++E+ + TLK +Y +P
Sbjct: 178 PKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILIPEH 237
Query: 239 YKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL +LT E + ++F +L L+ L R + M Q +R +L
Sbjct: 238 VKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSL 297
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++F+A ILI TDVASRGLDIP+V++V+NYDIP++ +IHR GRTARAGR G AIS
Sbjct: 298 HRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISF 357
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIK--DSGNKRR 412
V Q ++ IE I KK+ E + ++ L +VT+AKR S M ++ + G ++R
Sbjct: 358 VTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKALTKVTKAKRESLMAMQKENFGERKR 417
Query: 413 RKGGDEDD 420
++ ++D
Sbjct: 418 QQKKKQND 425
>gi|317479221|ref|ZP_07938356.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
gi|316904509|gb|EFV26328.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
Length = 425
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 163/369 (44%), Positives = 228/369 (61%), Gaps = 5/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A + G+ TP+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALQKEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +N++++ A +L+PTRELAIQI E F A G LR AV+ GGV QT
Sbjct: 62 KLYK-TDNRKSIKAL---ILTPTRELAIQIGECFSAYGKYTGLRHAVIFGGVGQKPQTDE 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL D L N +L L++ VLDEADR+L+ F + IL ++P
Sbjct: 118 LKRGVQILVATPGRLQD-LVNQGFINLKALEFFVLDEADRMLDMGFIHDIRRILKLLPAK 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++ L + L +P K+E STVDT+ Q FV K K L+++L
Sbjct: 177 RQTLFFSATMPPEIETLANSMLTHPEKVEVTPASSTVDTISQSVYFVEKKEKKDLLIHLL 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S ++FTRT LA L G RA I G+ SQ+ R AL FK E +LI
Sbjct: 237 KNPAIESVLIFTRTKYGADKLARTLSKSGIRAEAIHGNKSQNARQRALTGFKNHELRVLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG G+A+S EL + I
Sbjct: 297 ATDIAARGIDVDQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDI 356
Query: 369 EKLIGKKLP 377
+KLIGK +P
Sbjct: 357 QKLIGKSIP 365
>gi|445499097|ref|ZP_21465952.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444789092|gb|ELX10640.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 550
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 226/373 (60%), Gaps = 6/373 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +V+ F + GL ++ A + G+ P+ IQA+AIP L+G+D++G AQTG+GKT F
Sbjct: 61 EPSQVR-FADFGLSPHILRALTDQGYVHPTPIQAQAIPVLLQGRDVMGAAQTGTGKTAGF 119
Query: 63 ALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
ALPI+Q LL A T PA A +L+PTRELA+Q++E +A LR V+ GG
Sbjct: 120 ALPIIQMLLAHASTS-TSPARHPVRALILTPTRELAVQVAENVKAYAQHTPLRSTVVFGG 178
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
+DM QT+ L IV+ATPGRL+DH+ K SLG ++ LV+DEADR+L+ F L
Sbjct: 179 MDMKGQTVILKAGVEIVIATPGRLLDHVEQ-KNISLGQVQMLVMDEADRMLDMGFLPDLQ 237
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY 239
I+N++P RQ +FSAT + ++KKL L NPV IE A T D + Q VP
Sbjct: 238 RIINLLPAKRQNLMFSATFSPEIKKLANTFLTNPVTIEVARSNQTADKVTQVVYKVPENQ 297
Query: 240 KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKF 299
K ++L + ++F+ T LA L G +A+ I G +Q +R+ AL F
Sbjct: 298 KHALTAHLLRQRELKQVIIFSNTKIGASRLAKGLEQEGMKAVAIHGDKTQQERMAALESF 357
Query: 300 KAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
K GE +IL+ TDVA+RGLDI + VINYD+P N++DY+HR+GRT RAG +G A+S+ +
Sbjct: 358 KKGEIDILVATDVAARGLDITDLPCVINYDLPYNAEDYVHRIGRTGRAGASGDALSIYSD 417
Query: 360 YELEWYLQIEKLI 372
+ IEKLI
Sbjct: 418 KDERLLADIEKLI 430
>gi|440748527|ref|ZP_20927779.1| ATP-dependent RNA helicase RhlE [Mariniradius saccharolyticus AK6]
gi|436483035|gb|ELP39111.1| ATP-dependent RNA helicase RhlE [Mariniradius saccharolyticus AK6]
Length = 410
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/405 (40%), Positives = 239/405 (59%), Gaps = 5/405 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LG+ D +++A G+ TP+ IQ +AIP L+G+DL+G AQTG+GKT AFA+PI+Q
Sbjct: 3 FKNLGIIDPILQALAQEGYTTPTPIQQQAIPIVLQGRDLLGCAQTGTGKTAAFAIPIIQH 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L AE ++ P A +L+PTRELAIQI E F A G + V+ GGV + Q AL
Sbjct: 63 L---AEKKQHRPGIKALILTPTRELAIQIDESFAAYGRFAKISHTVIFGGVSQLHQVNAL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ ++VATPGRL+D L K L L+ VLDEADR+L+ F + +++ ++P R
Sbjct: 120 KRGVDVLVATPGRLLD-LIGQKYIDLSKLEIFVLDEADRMLDMGFIHDVKKVIALLPSKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT FSATM +++KL + L +P +E STVD ++Q+ + K L+Y+L
Sbjct: 179 QTLFFSATMPPEIQKLADSLLTHPALVEVTPPSSTVDKIEQRLYYTNKGDKPALLLYLLQ 238
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E S +VFTRT + +L+ + I G+ SQ+ R ALN FK+G+ +L+
Sbjct: 239 EKKIGSALVFTRTKHGADKVVKLLQREKVKCAAIHGNKSQNNRQNALNDFKSGKLQVLVA 298
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + V NYD+P + Y+HR+GRT RAG +G+A+S V+ L+ IE
Sbjct: 299 TDIAARGIDIDELANVFNYDLPNIPETYVHRIGRTGRAGNSGLAMSFVDGETLKELKDIE 358
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK 414
KLIGKK+P ++ T AK +Q SGN+ K
Sbjct: 359 KLIGKKIPVIEDHPFPFTGVVPEPTPAKP-AQKPASQSGNRSSDK 402
>gi|406973607|gb|EKD96982.1| hypothetical protein ACD_23C01154G0002, partial [uncultured
bacterium]
Length = 475
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 246/406 (60%), Gaps = 5/406 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L L D L A +G++T + IQA+AIP L+G+D++G AQTG+GKT AFALP++Q
Sbjct: 3 FAQLQLADPLARAVAEMGYETMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFALPLMQR 62
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+L+ EN T PA A VL PTRELA+Q++EQ E G +LR AV+ GG+DM QT
Sbjct: 63 MLK-HENASTSPARHPVRALVLLPTRELAVQVAEQVELYGKYTNLRSAVVFGGMDMKPQT 121
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +P
Sbjct: 122 IELKKGVEVLVATPGRLLDHI-EAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLP 180
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ R T LFSAT + ++K+L + L++PV IE A + T++Q + V + K L
Sbjct: 181 KQRTTLLFSATFSPEIKRLASSYLQDPVTIEVARSNAAASTVEQHFYSVEGEDKRHALHQ 240
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
IL + VF + LA L + G + + G SQ +RL AL FK+G ++
Sbjct: 241 ILRQRGIKQAFVFVNSKLGCARLARSLEHEGLKTTALHGDKSQDERLKALESFKSGGVDL 300
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+CTDVA+RGLDI V V N+DIP +++DY+HR+GRT RAG G+A++ V++ +
Sbjct: 301 LVCTDVAARGLDIKDVPAVFNFDIPFHAEDYVHRIGRTGRAGAEGLAVTFVSKSDQRLVT 360
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
IEKL+ K+ E EE L + + ++ +D ++RR
Sbjct: 361 DIEKLLKTKIELEGIEFEENLPDIRKQGHINDGRRLYREDGSDQRR 406
>gi|423722013|ref|ZP_17696189.1| hypothetical protein HMPREF1078_00252 [Parabacteroides merdae
CL09T00C40]
gi|409242715|gb|EKN35475.1| hypothetical protein HMPREF1078_00252 [Parabacteroides merdae
CL09T00C40]
Length = 426
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 246/428 (57%), Gaps = 10/428 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++L L + + +A + + TP+ IQAEAIP L+G DL+G AQTG+GKT AF++PI+Q
Sbjct: 9 TFEQLELIEPIRKALKKEKYTTPTPIQAEAIPVVLDGSDLLGCAQTGTGKTAAFSIPIIQ 68
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ E R P A +L+PTRELAIQI E F A G ++ V+ GGV QT A
Sbjct: 69 KIEERISRGRK-PGIKALILTPTRELAIQIGESFTAYGRYTHVKHTVIFGGVGQKPQTDA 127
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +++ATPGRL+D L N L TL+Y VLDEADR+L+ F + IL ++PR
Sbjct: 128 LERGVDVLIATPGRLLD-LINQGFIRLDTLEYFVLDEADRMLDMGFIHDIKRILPLLPRK 186
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM ++++L L P K+E STVDT+ Q FV K L +L
Sbjct: 187 RQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSSTVDTIDQSVYFVEKVEKINLLKNLL 246
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S S +VFTRT +A +L G A I G+ QS R AL+ FK +LI
Sbjct: 247 EDRSLESVLVFTRTKHGADKVARVLNKSGIGAEAIHGNKGQSARQRALSSFKDHTLRVLI 306
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRG+D+ + VINYD+P + Y+HR+GRT RAGR+G+A S + E+ + I
Sbjct: 307 ATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDI 366
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGI 428
+KLIGK++P E + + E V E K+ IK+ +R G D R
Sbjct: 367 QKLIGKEVPVAGGHMFETVEVKEAVAEKKK----AIKEESKRRNMFGSKRDGSFWR---- 418
Query: 429 NKKKLSKR 436
NKK+ + +
Sbjct: 419 NKKRTAAK 426
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 237/388 (61%), Gaps = 9/388 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A E TF + GL L+++ G+ +P+ IQA+AIP EG+D++G AQTG+GKT A
Sbjct: 9 APSAEALTFADFGLHPLLLKSIAETGYTSPTPIQAQAIPVVAEGRDVMGAAQTGTGKTAA 68
Query: 62 FALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
F LPIL L+ +A N PA A +L+PTRELA Q+ E + LR AV+ G
Sbjct: 69 FTLPILHRLMPLA-NSSASPARHPVRALILTPTRELADQVYENVKRYSLHTPLRSAVVFG 127
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
GVD+ Q AL + ++VATPGRL+DH+ K +L + LVLDEADR+L+ F L
Sbjct: 128 GVDIGPQKEALRQGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDL 186
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
+ I+ ++P RQ LFSAT + +++KL R+ L PV+IE A++ +T DT+ Q + +
Sbjct: 187 ERIIRLLPPQRQGLLFSATFSNEIRKLGRSYLNQPVEIEVAARNATADTVTQIAYQMTGE 246
Query: 239 YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
K +V+++ +VF+ T T LA L G +A I G SQ+ R+ AL
Sbjct: 247 AKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLELDGVKAESIHGDKSQADRMKALEA 306
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L
Sbjct: 307 FKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFT 366
Query: 359 QYELEWYLQIEKLIGKKLP----EFPAE 382
E + L IEKLI +++P + P+E
Sbjct: 367 PEEERYLLDIEKLIKRQVPRGKLDIPSE 394
>gi|423345822|ref|ZP_17323511.1| hypothetical protein HMPREF1060_01183 [Parabacteroides merdae
CL03T12C32]
gi|409221557|gb|EKN14506.1| hypothetical protein HMPREF1060_01183 [Parabacteroides merdae
CL03T12C32]
Length = 426
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 244/424 (57%), Gaps = 10/424 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++L L + + +A + + TP+ IQAEAIP L+G DL+G AQTG+GKT AF++PI+Q
Sbjct: 9 TFEQLELIEPIRKALKKEKYTTPTPIQAEAIPVVLDGSDLLGCAQTGTGKTAAFSIPIIQ 68
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ E R P A +L+PTRELAIQI E F A G ++ V+ GGV QT A
Sbjct: 69 KIEERISRGRK-PGIKALILTPTRELAIQIGESFTAYGRYTHVKHTVIFGGVGQKPQTDA 127
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +++ATPGRL+D L N L TL+Y VLDEADR+L+ F + IL ++PR
Sbjct: 128 LERGVDVLIATPGRLLD-LINQGFIRLDTLEYFVLDEADRMLDMGFIHDIKRILPLLPRK 186
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM ++++L L P K+E STVDT+ Q FV K L +L
Sbjct: 187 RQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSSTVDTIDQSVYFVEKVEKINLLKNLL 246
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S S +VFTRT +A +L G A I G+ QS R AL+ FK +LI
Sbjct: 247 EDRSLESVLVFTRTKHGADKVARVLNKSGIGAEAIHGNKGQSARQRALSSFKDHTLRVLI 306
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRG+D+ + VINYD+P + Y+HR+GRT RAGR+G+A S + E+ + I
Sbjct: 307 ATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDI 366
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGI 428
+KLIGK++P E + + E V E K+ IK+ +R G D R
Sbjct: 367 QKLIGKEVPVAGGHMFETVEVKEAVAEKKK----AIKEESKRRNMFGSKRDGSFWR---- 418
Query: 429 NKKK 432
NKK+
Sbjct: 419 NKKR 422
>gi|266619246|ref|ZP_06112181.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
gi|288869241|gb|EFD01540.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
Length = 432
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/369 (43%), Positives = 227/369 (61%), Gaps = 1/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+L L L++A E G+ TPS IQ +AIPH L GKD++G AQTG+GKT AFALPI+Q
Sbjct: 2 TFKDLQLSAPLLKALEEKGYTTPSPIQEKAIPHVLAGKDVLGCAQTGTGKTAAFALPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L+ ++ + + + +L+PTRELA+QI+E F+ GS +RCAV+ GGV + Q
Sbjct: 62 NLMRPSDKKHSKRVIRSLILTPTRELALQIAENFKEYGSHTPVRCAVIFGGVSAVPQIKE 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL D L + SL ++ VLDEADR+L+ F + +I++++P
Sbjct: 122 LQRGIDILVATPGRLND-LIHQGEISLSHVEMFVLDEADRMLDMGFIHDVKKIISLLPVK 180
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT LFSATM +++ L L NP +E S VD ++ +V + K LV++L
Sbjct: 181 KQTLLFSATMPPEIQALTEKLLHNPAVVEVTPVSSIVDLIEDSLYYVDKENKRALLVHLL 240
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +ST+VFTRT +A L A I G SQ R AL++FKAG +L
Sbjct: 241 KREAITSTLVFTRTKHGADRMAKFLTKNRINAAAIHGDKSQGARQKALSQFKAGTVRVLA 300
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + VIN+D+P + Y+HR+GRT RAG G AIS + E + I
Sbjct: 301 ATDIAARGIDIEELSCVINFDLPNVPETYVHRIGRTGRAGLGGRAISFSDIEEKAYVEDI 360
Query: 369 EKLIGKKLP 377
EKLIGKK+P
Sbjct: 361 EKLIGKKIP 369
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 239/374 (63%), Gaps = 12/374 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L L L ACE +G+ TP+ IQA IP AL G+D+ G AQTGSGKT AFALP+L+
Sbjct: 212 FNDLHLSRPLCRACEKLGYATPTPIQAAIIPIALTGRDVCGRAQTGSGKTAAFALPLLER 271
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+L +N V A ++ PTRELA+Q ++ + LG +++ A +VGG+ M +Q AL
Sbjct: 272 MLHRPKN--AVSAIHVVIMVPTRELAVQCAQMIQRLGEYTNVQVATIVGGLSMERQAAAL 329
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+RP IVVATPGRL+DH+ NT F + +VLDEADRLL F + + EI+ +PR R
Sbjct: 330 RQRPEIVVATPGRLIDHVRNTHSFGFEDVAAVVLDEADRLLEMGFLEEIKEIVRNMPRQR 389
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKY---KDCYLVY 246
QT LFSAT+T V++L ++NP ++ A S +T TL ++ + ++ K+ +L+
Sbjct: 390 QTLLFSATLTSAVEELASLSMRNPARLSADSLGTTPMTLTEEIVKIKPQFVAKKEAHLLS 449
Query: 247 ILT-EVSASSTMVFTRT-CDATRL-LALMLRNLGQRAIPISGHMSQSKRLGALNKFKA-G 302
+L+ T+VF +T A RL + L L N+ +A + G M+Q++RL AL F++
Sbjct: 450 LLSRSFKGKETIVFAKTKVQAHRLKIVLGLSNI--KACELHGDMTQTQRLAALEDFRSNA 507
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
E I++ TDVA+RGLDI SVD+V++YD P N Y+HRVGRTARAGR GVAI+ + +Y+
Sbjct: 508 ETKIMVATDVAARGLDIASVDLVVSYDAPKNVASYLHRVGRTARAGRKGVAITFMEEYDR 567
Query: 363 EWYLQIEKLIGKKL 376
++K G+KL
Sbjct: 568 ALVKTLQKR-GQKL 580
>gi|363752960|ref|XP_003646696.1| hypothetical protein Ecym_5095 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890332|gb|AET39879.1| hypothetical protein Ecym_5095 [Eremothecium cymbalariae
DBVPG#7215]
Length = 438
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/428 (42%), Positives = 252/428 (58%), Gaps = 28/428 (6%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL LVEA ++ P+ +Q IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 5 FKSLGLSKWLVEALHSMKITQPTIVQKACIPEILKGCDCIGGAKTGSGKTIAFAAPMLS- 63
Query: 70 LLEIAENQRTVPA-FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
N P+ F VL+PTRELA+QI+EQF ALGS ++++ A++VGG D+++Q L
Sbjct: 64 ------NWSADPSGMFGVVLTPTRELAMQIAEQFTALGSIMNIKVALVVGGDDIVKQALE 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPH ++ATPGRL H+ ++ ++G L KYLVLDEAD LL + F K L L+V+
Sbjct: 118 LQRRPHFIIATPGRLAHHIMHSGEDTIGGLRRVKYLVLDEADILLTNTFGKDLATCLSVL 177
Query: 186 P--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQ LF+AT+T +VK L+ A K PV ++E + LK +Y VP
Sbjct: 178 PPKEKRQNLLFTATITDQVKALKEAPRVEGKPPVFSFQVEDLDCLAIPKALKTEYLLVPE 237
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL+ E + + +VF + +L LR L R + + Q +R +
Sbjct: 238 HVKEAYLYQILSSEEYNDKTVIVFVNRTVSAEILRRTLRLLDVRVTSLHSQLPQKERTNS 297
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L +F+A ILI TDVASRGLDIP+V +V+NYDIP N YIHRVGRTARAGR+G ++S
Sbjct: 298 LQRFRANAARILIATDVASRGLDIPAVQLVLNYDIPANPDTYIHRVGRTARAGRSGESLS 357
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIKDSG----- 408
V+ ++ IE I KK+ EF + ++ L +VT AKR S M + G
Sbjct: 358 FVSPKDVSRIKAIESRINKKMDEFTKVGDTAVIRKALTKVTVAKRESLMAMDKEGFGEKR 417
Query: 409 NKRRRKGG 416
++R KGG
Sbjct: 418 KQQRNKGG 425
>gi|154492527|ref|ZP_02032153.1| hypothetical protein PARMER_02161 [Parabacteroides merdae ATCC
43184]
gi|154087752|gb|EDN86797.1| DEAD/DEAH box helicase [Parabacteroides merdae ATCC 43184]
Length = 419
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 244/424 (57%), Gaps = 10/424 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++L L + + +A + + TP+ IQAEAIP L+G DL+G AQTG+GKT AF++PI+Q
Sbjct: 2 TFEQLELIEPIRKALKKEKYTTPTPIQAEAIPVVLDGSDLLGCAQTGTGKTAAFSIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ E R P A +L+PTRELAIQI E F A G ++ V+ GGV QT A
Sbjct: 62 KIEERISRGRK-PGIKALILTPTRELAIQIGESFTAYGRYTHVKHTVIFGGVGQKPQTDA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +++ATPGRL+D L N L TL+Y VLDEADR+L+ F + IL ++PR
Sbjct: 121 LERGVDVLIATPGRLLD-LINQGFIRLDTLEYFVLDEADRMLDMGFIHDIKRILPLLPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM ++++L L P K+E STVDT+ Q FV K L +L
Sbjct: 180 RQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSSTVDTIDQSVYFVEKVEKINLLKNLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S S +VFTRT +A +L G A I G+ QS R AL+ FK +LI
Sbjct: 240 EDRSLESVLVFTRTKHGADKVARVLNKSGIGAEAIHGNKGQSARQRALSSFKDHTLRVLI 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRG+D+ + VINYD+P + Y+HR+GRT RAGR+G+A S + E+ + I
Sbjct: 300 ATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKDI 359
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGI 428
+KLIGK++P E + + E V E K+ IK+ +R G D R
Sbjct: 360 QKLIGKEVPVAGGHMFETVEVKEAVAEKKK----AIKEESKRRNMFGSKRDGSFWR---- 411
Query: 429 NKKK 432
NKK+
Sbjct: 412 NKKR 415
>gi|160897598|ref|YP_001563180.1| DEAD/DEAH box helicase [Delftia acidovorans SPH-1]
gi|160363182|gb|ABX34795.1| DEAD/DEAH box helicase domain protein [Delftia acidovorans SPH-1]
Length = 504
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 253/439 (57%), Gaps = 16/439 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A ++G+++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ EN PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLMR-HENTSASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSHL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L++PV IE A T T++Q++ V K L
Sbjct: 182 PKTRTTLLFSATFSPEIKRLASSYLQDPVTIEVARPNETASTVEQRFYSVSDDDKRYALR 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + VF+ + L L G RA + G SQ +RL AL FK GE +
Sbjct: 242 SLLKQRDIRQAFVFSNSKLGCARLTRALERDGLRATALHGDKSQDERLKALEAFKRGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V NYD+P N++DY+HR+GRT RAG +G+A++LV ++
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGIAVTLVTNHDARLV 361
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG--NKRRRKG---GDEDD 420
+IEKLI KK+ P E+ R R ++ + SG + R +G GD
Sbjct: 362 GEIEKLIKKKINVEPCPMEDFRGSAPR---GHRFDELPRQSSGGYGRERDRGAERGDRGG 418
Query: 421 DIGR---QFGINKKKLSKR 436
D R FG ++++R
Sbjct: 419 DASRGSSGFGHRGSRMTQR 437
>gi|50302587|ref|XP_451229.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690512|sp|Q6CXW0.1|DBP8_KLULA RecName: Full=ATP-dependent RNA helicase DBP8
gi|49640360|emb|CAH02817.1| KLLA0A05203p [Kluyveromyces lactis]
Length = 435
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 243/420 (57%), Gaps = 21/420 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LG LVEA + P+ IQ IP L+G+D IG A TGSGKT AFA P+L
Sbjct: 6 FKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPMLTK 65
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E + F VL+PTRELA+QI+EQF A GS +++R A++VGG ++QQ + L
Sbjct: 66 WSEDPQ------GMFGIVLTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESIVQQAIEL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVIP 186
KRPH ++ATPGRL H+ N+ ++G LK +LVLDEAD LL + F K L ++++P
Sbjct: 120 QKRPHFIIATPGRLAHHVLNSGEDTIGGLKRVKFLVLDEADILLTETFSKDLATCVSILP 179
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQ LF+ATMT +VK L A K PV ++E+ + TL+ Y VP
Sbjct: 180 PKNKRQNLLFTATMTDQVKALSDAPQTEGKPPVFTFEVESVDNVAIPKTLETTYLLVPEH 239
Query: 239 YKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL ILT + SS ++F +L L++L R + M Q +R ++
Sbjct: 240 VKESYLYQILTSEKYVKSSCIIFVNRTVTAEILRRTLKSLDVRVTSLHSQMPQQERTNSV 299
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
+F+A +LI TDVASRGLDIP V++V+NYDIP N +IHR GRTARAGR G ++
Sbjct: 300 QRFRAQAARVLIATDVASRGLDIPIVELVVNYDIPGNPDTFIHRAGRTARAGRHGESLCF 359
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL--LERVTEAKRISQMTIKDSGNKRRRK 414
V + +++ IE+ I KK+ EF + ++ L +VT AKR S M + G RRK
Sbjct: 360 VTEKDIQRVEAIEERINKKMEEFTDVGDTAVIRKSLTKVTAAKRESLMAMDKEGFGERRK 419
>gi|422322840|ref|ZP_16403880.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
gi|317402151|gb|EFV82742.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
Length = 481
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 235/380 (61%), Gaps = 9/380 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F + GL L+++ G+ TP+ IQA+AIP +EG+D++G AQTG+GKT AF LPIL
Sbjct: 20 FSDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILHR 79
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L+ +A N PA A +L+PTRELA Q+ E + LR AV+ GGVD+ Q
Sbjct: 80 LMPLA-NTSASPARHPVRALILTPTRELADQVYESVKRYSKQTPLRSAVVFGGVDIGPQK 138
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL + ++VATPGRL+DH+ K +L + LVLDEADR+L+ F L+ I+ ++P
Sbjct: 139 EALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLLP 197
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQ LFSAT + +++KL R+ L +PV+IE A++ +T +T+ Q + K +V+
Sbjct: 198 AQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATANTITQIAYKMSGDQKRAAVVH 257
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ +VF+ T T LA L G +A I G +Q+ R+ AL FKAGE +
Sbjct: 258 LVKSRGLKQVIVFSNTKIGTARLARELERDGVKAESIHGDKTQADRMKALEAFKAGELEV 317
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG TG AI+L E + L
Sbjct: 318 LVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGATGEAIALFTADEERFLL 377
Query: 367 QIEKLIGKKLP----EFPAE 382
IEKLI +++P + PAE
Sbjct: 378 DIEKLIKREVPRGTLDVPAE 397
>gi|33598065|ref|NP_885708.1| ATP-dependent RNA helicase [Bordetella parapertussis 12822]
gi|33566623|emb|CAE38832.1| putative ATP-dependent RNA helicase [Bordetella parapertussis]
Length = 477
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 237/386 (61%), Gaps = 9/386 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
+ +TF + GL L+++ + G+ P+ IQA+AIP +EG+D++G AQTG+GKT AF
Sbjct: 13 DAPTRTFADFGLHPLLLKSIADTGYTNPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFT 72
Query: 64 LPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
LPIL L+ +A N PA A +L+PTRELA Q+ E + LR AV+ GGV
Sbjct: 73 LPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKRYSLHTPLRSAVVFGGV 131
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D+ Q AL + ++VATPGRL+DH+ K +L + LVLDEADR+L+ F L+
Sbjct: 132 DIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLER 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++ +T DT+ Q + K
Sbjct: 191 IIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATADTVTQIAYQMHGDTK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+V+++ +VF+ T T LA L G +A I G +Q R+ AL FK
Sbjct: 251 RAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIHGDKTQGDRMKALEAFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L
Sbjct: 311 AGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTAD 370
Query: 361 ELEWYLQIEKLIGKKLP----EFPAE 382
E + L IEKLI +++P E PA+
Sbjct: 371 EERYLLDIEKLIKRQVPRGKLELPAD 396
>gi|255534886|ref|YP_003095257.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
gi|255341082|gb|ACU07195.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
Length = 417
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 254/436 (58%), Gaps = 27/436 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
F +L L D + +A + G+ P+ IQA+AIP L+G+DL+G AQTG+GKT AFA+PILQ
Sbjct: 2 NFTDLQLIDPIAKALQEEGYTQPTPIQAKAIPSILQGRDLLGTAQTGTGKTAAFAIPILQ 61
Query: 69 ALLE--IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L E I NQ A +L+PTRELAIQI E F A G + LR V+ GGV Q
Sbjct: 62 NLTEKNIRNNQ-----IKALILTPTRELAIQIEESFNAYGRHLRLRNLVVFGGVKQSGQE 116
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
AL K I+VATPGRL+D ++ +G SL L+ VLDEADR+L+ F + I+ ++
Sbjct: 117 AALKKGVDILVATPGRLLDFIS--QGIISLKNLEIFVLDEADRMLDMGFVHDVKRIIKLL 174
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT FSAT ++ KL + L NPVK+E A +T DT+KQ+ FV + K L
Sbjct: 175 PPKRQTLFFSATFPDEISKLANSMLTNPVKVEVAPVSATADTIKQKVYFVEKENKLELLT 234
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+IL + S +VF+RT +A L++ A I G+ SQ++R ALN FK+G+
Sbjct: 235 HILMNDISDSVLVFSRTKHGADKIARKLQSHKISAEAIHGNKSQNQRQNALNNFKSGKTR 294
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TD+A+RG+DI + V+N+++ S+ Y+HR+GRT RAG G +IS V+ +L
Sbjct: 295 ILVATDIAARGIDIDELKYVVNFELSDVSETYVHRIGRTGRAGADGSSISFVDGLDLVNL 354
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK----RRRKGGDEDDD 421
EKLIGKK+P E++ + + E KR DS NK R R G E
Sbjct: 355 KSTEKLIGKKIP----VEKDHPFHTDNLKEEKR-------DSNNKPFTPRPRAQGRE--S 401
Query: 422 IGRQFGINKKKLSKRK 437
IG + NK ++ +
Sbjct: 402 IGSKKPNNKSNFTRNR 417
>gi|448100218|ref|XP_004199301.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
gi|359380723|emb|CCE82964.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
Length = 437
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/444 (42%), Positives = 268/444 (60%), Gaps = 39/444 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ L EA ++ TP+ IQ IP L+G D IG A+TGSGKT AFA PIL
Sbjct: 2 SFSDLGVGKWLCEALNSMKIYTPTAIQKACIPKVLKGHDCIGGAKTGSGKTIAFASPILT 61
Query: 69 ALLEIAENQRTVPAFFAC--VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
E + C VL+PTRELA+QI+EQF ALG+ ++++ V+VGG D+++Q
Sbjct: 62 KWSE--------DPYGICGLVLTPTRELALQIAEQFAALGATMNIKVCVIVGGDDIVKQA 113
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILN 183
L L +RPHIV+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L+
Sbjct: 114 LELQRRPHIVIATPGRLADHILNSGEDTICGLRRVKYLVLDEADRLLSNSFGSDLERCFG 173
Query: 184 VIPR--MRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFV 235
V+P+ RQT LF+AT+T V+ L+ + K PV +++ + TL +Y FV
Sbjct: 174 VLPKPENRQTLLFTATITDAVRSLKEKPVPEGKLPVFVNEVDTVENIAIPSTLSIKYLFV 233
Query: 236 PAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P+ K+ YL +LT E ++T++F LL MLR L R + M QS+R+
Sbjct: 234 PSYVKEAYLHNLLTLPEYEKTTTIIFVNRTHTAELLRRMLRRLDFRVASLHSEMPQSERV 293
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
+L++FKA ILI TDVASRGLDIP V++V+NYDIP + D+IHRVGRTARAGR G +
Sbjct: 294 NSLHRFKANAARILIATDVASRGLDIPDVNLVVNYDIPADPDDFIHRVGRTARAGRKGDS 353
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
IS+V + ++ L IE+ I KK+ + +E VT+ K I ++++K++ +R
Sbjct: 354 ISIVAEKDVNRILAIEERINKKMEK-----------MEDVTDNKVI-KISLKETSVAKRE 401
Query: 414 KGGDEDDDIGRQFGINKKKLSKRK 437
D D D FG KK+ +K K
Sbjct: 402 AMMDMDKD---SFG-EKKRTNKMK 421
>gi|45190904|ref|NP_985158.1| AER301Cp [Ashbya gossypii ATCC 10895]
gi|74693373|sp|Q756G5.1|DBP8_ASHGO RecName: Full=ATP-dependent RNA helicase DBP8
gi|44983946|gb|AAS52982.1| AER301Cp [Ashbya gossypii ATCC 10895]
gi|374108383|gb|AEY97290.1| FAER301Cp [Ashbya gossypii FDAG1]
Length = 435
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 243/421 (57%), Gaps = 21/421 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LG+ L EA ++ P+ IQ IP L G+D IG A+TGSGKT AFA P+L
Sbjct: 7 TFKDLGVAKWLAEALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAFAAPML- 65
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ F VL+PTRELA+QI+EQF ALGS +++R A++VGG D++ Q L
Sbjct: 66 -----TKWSADPCGMFGIVLTPTRELAMQIAEQFTALGSVMNIRVALVVGGEDIVSQALE 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVI 185
L ++PH ++ATPGRL H+ ++ ++G LK YLVLDEAD LL D F +L + ++
Sbjct: 121 LQRKPHFIIATPGRLAHHIMHSGEDTIGGLKRVRYLVLDEADILLTDTFSDALATCVQIL 180
Query: 186 P--RMRQTYLFSATMTKKVKKLQRA---CLKNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQ LF+ATMT +V L+ A K P+ +E + +L+ Y VP
Sbjct: 181 PPKEKRQNLLFTATMTDQVLALKDAPPTSGKPPLFSFHVENLDDLAVPASLQTTYLLVPE 240
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL +L+ E + S +VF + +L ML L R + M Q +R +
Sbjct: 241 HVKEAYLYQVLSSEEYKSKSAIVFVNRTISAEILRRMLMQLEIRVTSLHSQMPQRERTNS 300
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L +F+A +LI TDVASRGLDIP+V +V+NYDIP N YIHR GRTARAGR G A+S
Sbjct: 301 LQRFRANAARVLIATDVASRGLDIPAVQLVVNYDIPANPDTYIHRAGRTARAGRGGEALS 360
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIKDSGNKRRR 413
+ ++ IE+ IGKK+ EF + L+ L +VT AKR S M + G RR
Sbjct: 361 FIAPKDVSRIQAIEERIGKKMDEFTKVGDTALIRKSLNKVTVAKRESLMAMDKEGFGERR 420
Query: 414 K 414
K
Sbjct: 421 K 421
>gi|190405946|gb|EDV09213.1| dead box protein [Saccharomyces cerevisiae RM11-1a]
Length = 431
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 251/428 (58%), Gaps = 23/428 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL L E+ + P+ IQ IP LEG+D IG A+TGSGKT AFA P+L
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
E F VL+PTRELA+QI+EQF ALGS +++R +V+VGG ++QQ L L
Sbjct: 64 WSEDPS------GMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVIP 186
++PH ++ATPGRL H+ ++ ++G L KYLVLDEAD LL F L ++ +P
Sbjct: 118 QRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALP 177
Query: 187 --RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAK 238
RQT LF+AT+T +VK LQ A + K P+ ++E+ + TLK +Y VP
Sbjct: 178 PKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEH 237
Query: 239 YKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
K+ YL +LT E + ++F +L L+ L R + M Q +R +L
Sbjct: 238 VKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSL 297
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
++F+A LI TDVASRGLDIP+V++V+NYDIP++ +IHR GRTARAGR G AIS
Sbjct: 298 HRFRANAARTLIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISF 357
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIK--DSGNKRR 412
V Q ++ IE I KK+ E + ++ L +VT+AKR S M ++ + G ++R
Sbjct: 358 VTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKALTKVTKAKRESLMAMQKENFGERKR 417
Query: 413 RKGGDEDD 420
++ ++D
Sbjct: 418 QQKKKQND 425
>gi|329960847|ref|ZP_08299126.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
gi|328532133|gb|EGF58937.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
Length = 423
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 247/420 (58%), Gaps = 14/420 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A + G+ TP+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLKLIEPILKALQEEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +N++ + A +L+PTRELAIQI E FEA G LR V+ GGV QT
Sbjct: 62 KLYK-TDNRKGIKAL---ILTPTRELAIQIGESFEAYGRYTGLRHTVIFGGVGQKPQTDE 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL D L N +L L + VLDEADR+L+ F + IL +P
Sbjct: 118 LKRGVQILVATPGRLQD-LVNQGFINLKALDFFVLDEADRMLDMGFIHDIRRILKFLPAK 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++ L + L +P K+E STVDT+ Q FV K K L+++L
Sbjct: 177 RQTLFFSATMPPEIETLANSMLTDPEKVEVTPASSTVDTISQSVYFVEKKEKKDLLIHLL 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +S ++FTRT LA L G A I G+ SQ+ R AL FK+ +LI
Sbjct: 237 KDPSIASVLIFTRTKHGADKLARTLSKSGIPAEAIHGNKSQNARQRALTGFKSHTLRVLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG G+A+S EL + I
Sbjct: 297 ATDIAARGIDVDQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDI 356
Query: 369 EKLIGKKLP---EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 425
+KLIGK +P + P + + E+ TE ++ +K NK+ R G + D R+
Sbjct: 357 QKLIGKTIPIIKDHPFITTDGIQAQEKKTE-----EIKVKAKENKKYR-GNRSNGDFWRR 410
>gi|73540223|ref|YP_294743.1| helicase [Ralstonia eutropha JMP134]
gi|72117636|gb|AAZ59899.1| Helicase, C-terminal:Type III restriction enzyme, res
subunit:DEAD/DEAH box helicase, N-terminal [Ralstonia
eutropha JMP134]
Length = 506
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 224/368 (60%), Gaps = 1/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELGL D+LV A G+ TP+ IQA+AIP L+G DL+ AQTG+GKT F LP+LQ
Sbjct: 2 SFSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E A ++ PA A VL+PTRELA Q+ E G + LR V+ GGV + Q
Sbjct: 62 LLSESAPQRQGKPAVRALVLTPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIEQ 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + IVVATPGRL+DH++ + L +++ LVLDEADR+L+ F + +ILNV+P
Sbjct: 122 LRRGVEIVVATPGRLLDHVSQ-RTIDLSSVELLVLDEADRMLDMGFIHDIRKILNVLPPK 180
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT + ++ L L NP IE A + +T +T+ Q+ V + K L +++
Sbjct: 181 RQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVAQRVYPVDRERKRELLAHLV 240
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E +VFTRT LA L G A+ I G+ SQS R AL++FKAG +L+
Sbjct: 241 REHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRLLV 300
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + V+N+D+P +DY+HR+GRT RAG G AISLV E I
Sbjct: 301 ATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEHGLLRDI 360
Query: 369 EKLIGKKL 376
E+LI +KL
Sbjct: 361 ERLIKRKL 368
>gi|365983068|ref|XP_003668367.1| hypothetical protein NDAI_0B00900 [Naumovozyma dairenensis CBS 421]
gi|343767134|emb|CCD23124.1| hypothetical protein NDAI_0B00900 [Naumovozyma dairenensis CBS 421]
Length = 436
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 251/422 (59%), Gaps = 22/422 (5%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+TFK LGL L E+ + P+ IQ+ IP L+G+D IG A+TGSGKT AFA P+L
Sbjct: 7 ETFKSLGLSKWLYESLSAMKITQPTAIQSACIPEILKGRDCIGGAKTGSGKTIAFAGPML 66
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
E F VL+PTRELA+QI+EQF ALGS +++R A++VGG +++Q +
Sbjct: 67 TKWSE------DPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVAIVVGGQSIVEQAI 120
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNV 184
L +PH ++ATPGRL H+ N+ ++G LK +LVLDEAD LL D F L +
Sbjct: 121 QLQNKPHFIIATPGRLAHHIMNSGEDTVGGLKRTKFLVLDEADSLLTDSFAGDLATCIGA 180
Query: 185 IP--RMRQTYLFSATMTKKVKKLQRACLKN------PVKIEAASKYSTVDTLKQQYRFVP 236
+P RQT LF+AT+T +V+ L+ A ++ ++E+ K + TLK +Y VP
Sbjct: 181 LPPKHKRQTLLFTATITDQVRTLENAPAQDGKPSVFTYQVESVDKVAIPSTLKTEYILVP 240
Query: 237 AKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
K+ YL +LT SS ++F +L L +L R + +M Q +R
Sbjct: 241 EHVKEAYLYQLLTCETYKDSSAIIFVNRAMTAEVLRRTLYHLDVRVASLHSYMPQQERTN 300
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
+L++F+A +L+ TDVA+RGLDIP V++VINYDIP++ +IHR GRTARAGR+G AI
Sbjct: 301 SLHRFRANAARVLVATDVAARGLDIPIVELVINYDIPSDPDTFIHRAGRTARAGRSGDAI 360
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTI-KDSGNKR 411
S V Q ++ IE+ I KK+ E + ++ L +VT+AKR S M + K++ +R
Sbjct: 361 SFVTQRDVSRIEAIEERINKKMDESDKVHDTAVIRKALTKVTKAKRESLMAMEKENFGER 420
Query: 412 RR 413
+R
Sbjct: 421 QR 422
>gi|53712950|ref|YP_098942.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60681162|ref|YP_211306.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763047|ref|ZP_06091615.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|383117799|ref|ZP_09938542.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|423249596|ref|ZP_17230612.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|423256091|ref|ZP_17237019.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|423258064|ref|ZP_17238987.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|423264968|ref|ZP_17243971.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|423268460|ref|ZP_17247432.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|423273980|ref|ZP_17252927.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|423285051|ref|ZP_17263934.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
gi|52215815|dbj|BAD48408.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60492596|emb|CAH07368.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251946848|gb|EES87130.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|263255655|gb|EEZ27001.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|387777510|gb|EIK39607.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|392649282|gb|EIY42960.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|392655681|gb|EIY49323.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|392703744|gb|EIY96885.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|392704701|gb|EIY97836.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|392707413|gb|EIZ00532.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|404579640|gb|EKA84354.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
Length = 427
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 225/370 (60%), Gaps = 7/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A G+ +P+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + A VL+PTRELAIQI E FEA G L+ AV+ GGV QT A
Sbjct: 62 KLYKTDHRK----GIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L I+VATPGRL+D ++ +GF SL +L + VLDEADR+L+ F + IL ++P
Sbjct: 118 LRSGIQILVATPGRLLDLIS--QGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPA 175
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSATM +++ L + L P K+E STVD + QQ FV K K L+++
Sbjct: 176 RRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASSTVDIISQQVYFVEKKEKKDLLIHL 235
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S S ++FTRT LA +L G A I G+ +Q+ R AL FK L
Sbjct: 236 LKDTSIESVLIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRAL 295
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG GVAIS EL +
Sbjct: 296 IATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKD 355
Query: 368 IEKLIGKKLP 377
I+KLIGK +P
Sbjct: 356 IQKLIGKNIP 365
>gi|152981130|ref|YP_001352218.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille]
gi|151281207|gb|ABR89617.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille]
Length = 513
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 246/436 (56%), Gaps = 14/436 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++ GL E++ A + G+ P+ IQAEAIP L+G D++G AQTG+GKT F+LPI+Q
Sbjct: 38 FEDFGLAPEILRALSDQGYVHPTPIQAEAIPVVLQGIDVMGAAQTGTGKTAGFSLPIIQL 97
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L+ A N PA A +L+PTRELA Q+++ +A LR V+ GGVDM QT
Sbjct: 98 LMAHA-NSSASPARHPVRALILTPTRELADQVADNVKAYSRHTPLRSVVVFGGVDMAPQT 156
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL IV+ATPGRL+DH+ K +L + LV+DEADR+L+ F L I+N++P
Sbjct: 157 AALRSGVEIVIATPGRLLDHIQQ-KTLNLSQTQILVMDEADRMLDMGFLPDLQRIINLLP 215
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ +FSAT + ++KKL LK+PV IE A +T + + Q V K + Y
Sbjct: 216 KQRQNLMFSATFSPEIKKLAATFLKDPVTIEVARSNATAENVTQIVYKVEEGDKGDAVSY 275
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
I+ E +VF+ T LA L N G +A I G SQ++R+ AL FK G +
Sbjct: 276 IIRERGLKQVIVFSNTKIGASRLARQLENEGVKASAIHGDKSQAERMAALEAFKNGTIEV 335
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VINYD+P N++DY+HR+GRT RAG +G AISL + + +
Sbjct: 336 LVATDVAARGLDIAELPCVINYDLPYNAEDYVHRIGRTGRAGASGDAISLYSDKDARLLV 395
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR-----RRKGGDEDDD 421
IEK+I K PA+ + R +E K S +D R RR+ +
Sbjct: 396 DIEKMIKHKF--VPAQLAGFVPAGNRASERKERSPR--RDDSESRGRGSERRESAPREAS 451
Query: 422 IGRQFGINKKKLSKRK 437
GR G + RK
Sbjct: 452 GGRDPGSRSAYAAPRK 467
>gi|313146179|ref|ZP_07808372.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|423279249|ref|ZP_17258162.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
gi|313134946|gb|EFR52306.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404585418|gb|EKA90034.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
Length = 427
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 225/370 (60%), Gaps = 7/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A G+ +P+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + A VL+PTRELAIQI E FEA G L+ AV+ GGV QT A
Sbjct: 62 KLYKTDHRK----GIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L I+VATPGRL+D ++ +GF SL +L + VLDEADR+L+ F + IL ++P
Sbjct: 118 LRGGIQILVATPGRLLDLIS--QGFVSLNSLDFFVLDEADRMLDMGFIHDIKRILKLLPT 175
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSATM +++ L + L P K+E STVD + QQ FV K K L+++
Sbjct: 176 KRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASSTVDIISQQVYFVEKKEKKDLLIHL 235
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S S ++FTRT LA +L G A I G+ +Q+ R AL FK L
Sbjct: 236 LKDASIESVLIFTRTKYGADKLARILTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRAL 295
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG GVAIS EL +
Sbjct: 296 IATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKD 355
Query: 368 IEKLIGKKLP 377
I+KLIGK +P
Sbjct: 356 IQKLIGKNIP 365
>gi|50289845|ref|XP_447354.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690916|sp|Q6FQZ0.1|DBP8_CANGA RecName: Full=ATP-dependent RNA helicase DBP8
gi|49526664|emb|CAG60291.1| unnamed protein product [Candida glabrata]
Length = 437
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/430 (41%), Positives = 255/430 (59%), Gaps = 22/430 (5%)
Query: 1 MAEEKEVK-TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EE K F++LGL LVE+ + + +TP+ IQ+ IP L+G+D IG A+TGSGKT
Sbjct: 1 MTEEVSRKQNFRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKT 60
Query: 60 GAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGG 119
AFA P+L E F VL+PTRELA+QI+EQF ALGS +++R A++VGG
Sbjct: 61 IAFAGPMLTQWSE------DPTGMFGIVLTPTRELAMQIAEQFTALGSYMNIRVALVVGG 114
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEK 176
++ Q L L ++PH ++ATPGRL H+ N+ ++G LK YLVLDEAD LL + F
Sbjct: 115 ESIVDQALQLQRKPHFIIATPGRLAHHILNSGDDTVGGLKRVKYLVLDEADILLTETFSN 174
Query: 177 SLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTL 228
L + +P RQT LF+AT+T +V+ LQ A + K P+ ++E + TL
Sbjct: 175 DLKTCVGALPPKEKRQTLLFTATITDQVRALQDAPVQKGKQPLFCYEVENVDNVAIPSTL 234
Query: 229 KQQYRFVPAKYKDCYLVYILT-EVSASST-MVFTRTCDATRLLALMLRNLGQRAIPISGH 286
+Y VP K+ YL +LT E A+ST ++F A +L L+ L R +
Sbjct: 235 NTEYVLVPEHVKEAYLYQLLTCESYANSTAIIFVNRTTAAEVLRRTLKALDVRVASLHSQ 294
Query: 287 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 346
M Q +R ++++F+A +LI TDVASRGLDIP+V++VINYDIP++ +IHR GRTAR
Sbjct: 295 MPQQERTNSMHRFRANAARVLIATDVASRGLDIPTVELVINYDIPSDPDTFIHRSGRTAR 354
Query: 347 AGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTI 404
AGR G AIS + Q ++ IE I K+ E + ++ L +V++AKR + M +
Sbjct: 355 AGRKGDAISFITQRDVSRIEAIEARINMKMTECDKVHDTAVIRKALTKVSKAKREALMAM 414
Query: 405 KDSGNKRRRK 414
+ RRK
Sbjct: 415 EKENFGERRK 424
>gi|388567718|ref|ZP_10154148.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
gi|388265047|gb|EIK90607.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
Length = 482
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 230/373 (61%), Gaps = 5/373 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
++F EL L L +A +G++T + IQA+AIP L G+D++G AQTG+GKT AF+LP+
Sbjct: 2 TQSFSELNLAPALAKAVAEMGYETMTPIQAQAIPQVLTGRDVMGAAQTGTGKTAAFSLPL 61
Query: 67 LQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LQ LL+ EN T PA A VL PTRELA Q++EQ + LR V+ GG+DM
Sbjct: 62 LQRLLK-HENASTSPARHPVRALVLLPTRELADQVAEQVKLYAKYTQLRSTVVFGGMDMK 120
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
QTL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+
Sbjct: 121 PQTLELKKGVEVLVATPGRLLDHI-EAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILS 179
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ R T LFSAT + ++K+L + L++P+ +E A +T T++Q + V K
Sbjct: 180 YLPKQRTTLLFSATFSPEIKRLANSYLQDPITVEVARSNATASTVEQHFYRVDDDDKRGT 239
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L IL + VF + LA L G + G SQ +RL AL+ FK G
Sbjct: 240 LRQILRDRGLKQAFVFVNSKLGCARLARSLERDGLNTAALHGDKSQDERLKALDAFKQGN 299
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
++L+CTDVA+RGLDI V V N+DIP N++DY+HR+GRT RAG +G+A+S V+ +
Sbjct: 300 VDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFVSGRDAR 359
Query: 364 WYLQIEKLIGKKL 376
++EKL+GKKL
Sbjct: 360 LVGELEKLLGKKL 372
>gi|424662680|ref|ZP_18099717.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
gi|404576370|gb|EKA81108.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
Length = 427
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 225/370 (60%), Gaps = 7/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A G+ +P+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + A VL+PTRELAIQI E FEA G L+ AV+ GGV QT A
Sbjct: 62 KLYKTDHRK----GIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L I+VATPGRL+D ++ +GF SL +L + VLDEADR+L+ F + IL ++P
Sbjct: 118 LRGGIQILVATPGRLLDLIS--QGFVSLNSLDFFVLDEADRMLDMGFIHDIKRILKLLPT 175
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSATM +++ L + L P K+E STVD + QQ FV K K L+++
Sbjct: 176 KRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASSTVDIISQQVYFVEKKEKKDLLIHL 235
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S S ++FTRT LA +L G A I G+ +Q+ R AL FK L
Sbjct: 236 LKDASIESVLIFTRTKYGADKLARILTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRAL 295
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG GVAIS EL +
Sbjct: 296 IATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGVAISFCESEELPYLKD 355
Query: 368 IEKLIGKKLP 377
I+KLIGK +P
Sbjct: 356 IQKLIGKNIP 365
>gi|399116636|emb|CCG19443.1| putative ATP-dependent RNA helicase [Taylorella asinigenitalis
14/45]
Length = 444
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 229/372 (61%), Gaps = 5/372 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K FKE G +++E N G+ + IQA + P LEG+D++G AQTG+GKT AF LP+L
Sbjct: 4 KEFKEFGFHSKILENISNTGYLHATPIQALSFPPILEGRDVMGAAQTGTGKTAAFTLPLL 63
Query: 68 QALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
++ A T PA VL+PTRELA QIS+ A G+ LR +++ GGVD
Sbjct: 64 NRMIPKASFS-TSPAKHPVRMLVLTPTRELAEQISKNVIAYADGLPLRTSLIYGGVDFNA 122
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L L + IV+ATPGRL+DH+ + +L +++L+LDEADR+L+ F L +IL
Sbjct: 123 QKLELMRGADIVIATPGRLLDHVEQ-RTINLNQVEFLILDEADRMLDMGFMPDLLKILAQ 181
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P RQ+ L+SAT + ++ L + L +PV+I AS ST T+ Q+ V K+ L
Sbjct: 182 LPSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASNNSTASTITQEIFSVSEAEKNAAL 241
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+Y+L + ++ ++F+ + L L NL A + G +QS+R ALN FK+ +C
Sbjct: 242 LYLLASRNFNNVIIFSNRKITCKNLERYLNNLDLSAQSLHGDKTQSERTKALNLFKSAKC 301
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NIL+ TDVA+RGLDI VD VINY++P S+DY+HR+GRT RAGR G+AIS+ + E E
Sbjct: 302 NILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGRKGIAISMYSSDEEES 361
Query: 365 YLQIEKLIGKKL 376
+IE LIG K
Sbjct: 362 LHEIETLIGTKF 373
>gi|255942321|ref|XP_002561929.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586662|emb|CAP94307.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 520
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 182/456 (39%), Positives = 267/456 (58%), Gaps = 41/456 (8%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ ++ + TF EL + LV + + K P+ IQ IP L+GKD IG ++TGSGKT
Sbjct: 83 LGKQSGLSTFAELDVAPWLVSSLATMAIKRPTAIQKACIPEILKGKDCIGGSRTGSGKTM 142
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFA+PI+Q + R +A VL+PTRELA+QI EQF A+ + +++ ++VGG+
Sbjct: 143 AFAVPIMQ------QWARNPFGIYALVLTPTRELALQIYEQFRAVSAPQNMKPILVVGGM 196
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKS 177
DM QQ + L RPH+V+ATPGRL DH+ + ++ L K +VLDEADRLL
Sbjct: 197 DMRQQAIELASRPHVVIATPGRLADHIKTSGEDTVAGLRRVKMVVLDEADRLLASGPGSM 256
Query: 178 LDEI---LNVIPRM--RQTYLFSATMTKKVKKLQR---ACLKNPV---KIEAASKYSTVD 226
L ++ L +P RQT LF+ATMT +V+ L+ A K P+ +I ++
Sbjct: 257 LPDVETCLGALPPSAERQTLLFTATMTAEVRALKSMPAAGNKPPIFMTEIGTENQGKIPP 316
Query: 227 TLKQQYRFVPAKYKDCYLVYIL-TEVSASSTMV----FTRTCDATRLLALMLRNLGQRAI 281
TLKQ Y VP +++ +L +L TEV+ + ++ T+TCD LL LR LG R
Sbjct: 317 TLKQTYLKVPMTHREAFLHALLSTEVNVTKPVIVFCNHTKTCD---LLERTLRRLGHRIT 373
Query: 282 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 341
+ + QS+R L +F+A +L+ TDVASRGLDIPSV++VINY++P N DY+HRV
Sbjct: 374 SLHSILPQSERTANLARFRATAARVLVATDVASRGLDIPSVELVINYEVPRNPDDYVHRV 433
Query: 342 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 401
GRTARAGR+G A +L+ Q ++E L IE+ +G+++ EF E + E++ +
Sbjct: 434 GRTARAGRSGEATTLIGQRDVELVLAIEERVGRQMEEFAQEGVNI--------ESRVVRT 485
Query: 402 MTIKDSGNKRRRKGG--DEDDDIGRQFGINKKKLSK 435
+K+ G+ +R G DE DI G + KL K
Sbjct: 486 GLLKEVGSAKREAAGEIDEGRDI---LGRKRNKLKK 518
>gi|157107875|ref|XP_001649978.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108868632|gb|EAT32857.1| AAEL014904-PA [Aedes aegypti]
Length = 526
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 250/426 (58%), Gaps = 26/426 (6%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K K F +LGL+ + + +G + P+ IQ IP L+G+D IG A+TGSGKT AFAL
Sbjct: 4 KSDKKFSDLGLKPWIANQMDKLGLRRPTPIQEACIPRILDGQDCIGAAKTGSGKTFAFAL 63
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PILQ L E + FA VL+PT ELA QI+EQF G +S++ V+ GG D +
Sbjct: 64 PILQRLSEEPTSN------FALVLTPTHELAYQIAEQFSVAGQPMSVKVCVITGGTDQLL 117
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
+ L RPHIVVA PGRL HLT +S +++LV+DEADR+L+ F++ L I +
Sbjct: 118 EAQRLQSRPHIVVAMPGRLASHLTGCNTYSFRAMQFLVVDEADRVLSGSFDEDLAAIDSF 177
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA-----ASKYSTVDTLKQQYRFVPAKY 239
+P+ RQ FSAT+ K+ R P+ +A S+ +TV+TL Q+Y
Sbjct: 178 LPKKRQNLFFSATL----KEFMRENSVFPIGADAFEWSEESEVATVETLDQRYILCADYD 233
Query: 240 KDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
+D L+ L + +S M+FT + ++L++ L +G + + G + Q +R+ A
Sbjct: 234 RDMVLIETLRKFKEDNEEASVMIFTNSKKDCQVLSMTLNTIGFDNVCLHGFLRQKERVAA 293
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
LN+FK+ +LI TDVASRGLDIP+V +V+N+ +P +YIHRVGRTARAGR G+AIS
Sbjct: 294 LNRFKSKHVRVLIATDVASRGLDIPNVQLVLNHRLPKIPNEYIHRVGRTARAGRKGLAIS 353
Query: 356 LVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG------ 408
+ +LE+ +IE LI KL E P ++ V + +V+ A+R ++M + +
Sbjct: 354 IFRFPRDLEFLGEIESLINTKLTEHPIDQRLVERIFMQVSVARREAEMNLDNKDFDERQH 413
Query: 409 NKRRRK 414
N RR+K
Sbjct: 414 NYRRKK 419
>gi|345564525|gb|EGX47487.1| hypothetical protein AOL_s00083g423 [Arthrobotrys oligospora ATCC
24927]
Length = 451
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 263/427 (61%), Gaps = 37/427 (8%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LG++ LV + + K P+ IQA IP L+GK+ IG ++TGSGKT AFA+PILQ
Sbjct: 5 FASLGVKPWLVTSLGAMAIKRPTPIQAACIPEILKGKNCIGGSRTGSGKTVAFAVPILQM 64
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
A++ V FA +L+PTRELA+Q++EQF ALGS +L+ ++++GGVDM Q ++L
Sbjct: 65 W---AQDPFGV---FALILTPTRELALQLAEQFTALGSPQNLKLSLIIGGVDMRTQAISL 118
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVIP 186
++PH+V+ATPGRL DH+ ++ ++ L+ +V+DEADRLL++ F + L E L+V+P
Sbjct: 119 SQKPHVVIATPGRLADHIRSSGADTIAGLRRVRVVVMDEADRLLDEGFAEELVECLSVVP 178
Query: 187 RM----------RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDT--------L 228
RQT LF+AT+T+ V+ L+ + K S +DT L
Sbjct: 179 DQFGDKTKGIPARQTLLFTATVTESVRALKEGEGRAREKGGREVFISEIDTDSLAVPPTL 238
Query: 229 KQQYRFVPAKYKDCYLVYILTEVS--ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGH 286
Q Y F P+ +L +L+ ST++FT +LL+ L+ LG R P+
Sbjct: 239 HQTYIFKPSTVHLAFLHTLLSTPGNIKKSTIIFTNKKTTAQLLSHTLKPLGHRVTPLHSD 298
Query: 287 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 346
+SQ +R +L +F+AG ILI TDVA RGLDIP V++VIN+D+P + DYIHR+GRTAR
Sbjct: 299 LSQRERTDSLGRFRAGAARILIATDVAGRGLDIPEVELVINFDVPRDPDDYIHRIGRTAR 358
Query: 347 AGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-------LLERVTEAKRI 399
AG+ G +++ V++ ++ IE+ +G+++ E+ EEE V L L++V+EAKR+
Sbjct: 359 AGKKGESLTFVDEKDVLLIKAIEERVGREMVEY-KEEEGVSLEGRVVREELKKVSEAKRV 417
Query: 400 SQMTIKD 406
+ + I++
Sbjct: 418 AMLNIEE 424
>gi|413963140|ref|ZP_11402367.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
gi|413928972|gb|EKS68260.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
Length = 493
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 178/436 (40%), Positives = 248/436 (56%), Gaps = 19/436 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 18 TFDQFGLSADILKAVRESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 77
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ + LR V+ GGVDM Q
Sbjct: 78 RLLPSA-NTSASPARHPVRALMLTPTRELADQVAANVQTYSKHTPLRSTVVFGGVDMNPQ 136
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ AL + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 137 SDALRRGVEILIATPGRLLDHVQQ-KTVNLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 195
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST ++Q V K +
Sbjct: 196 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVRQIVYEVHESDKSGAVA 255
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E +VF + LA +L G A I G SQS+R+ AL+ FK GE
Sbjct: 256 QLIRERELKQVIVFCNSKIGASRLARVLEKDGIVATAIHGDRSQSERMQALDAFKRGEIE 315
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 316 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSANERKQL 375
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ-----------MTIKDSGNKRRRK 414
IEKLI + L E EV + R A R + + +D RRR
Sbjct: 376 ADIEKLIKRPL---QVEPLEVTIRARRDASAPRRDERFGRPERTEHRHSPRDESGPRRRT 432
Query: 415 GGDEDDDIGRQFGINK 430
G D GRQ I++
Sbjct: 433 TGTHDRPRGRQQPIDE 448
>gi|33594279|ref|NP_881923.1| ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|384205577|ref|YP_005591316.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|408417408|ref|YP_006628115.1| ATP-dependent RNA helicase [Bordetella pertussis 18323]
gi|33564354|emb|CAE43658.1| putative ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|332383691|gb|AEE68538.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|401779578|emb|CCJ65116.1| putative ATP-dependent RNA helicase [Bordetella pertussis 18323]
Length = 477
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 236/386 (61%), Gaps = 9/386 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
+ +TF + GL L++ + G+ P+ IQA+AIP +EG+D++G AQTG+GKT AF
Sbjct: 13 DAPTRTFADFGLHPLLLKLIADTGYTNPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFT 72
Query: 64 LPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
LPIL L+ +A N PA A +L+PTRELA Q+ E + LR AV+ GGV
Sbjct: 73 LPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKRYSLHTPLRSAVVFGGV 131
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D+ Q AL + ++VATPGRL+DH+ K +L + LVLDEADR+L+ F L+
Sbjct: 132 DIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLER 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++ +T DT+ Q + K
Sbjct: 191 IIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATADTVTQIAYQMHGDTK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
+V+++ +VF+ T T LA L G +A I G +Q R+ AL FK
Sbjct: 251 RAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIHGDKTQGDRMKALEAFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L
Sbjct: 311 AGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTAD 370
Query: 361 ELEWYLQIEKLIGKKLP----EFPAE 382
E + L IEKLI +++P E PA+
Sbjct: 371 EERYLLDIEKLIKRQVPRGKLELPAD 396
>gi|78776809|ref|YP_393124.1| DEAD/DEAH box helicase [Sulfurimonas denitrificans DSM 1251]
gi|78497349|gb|ABB43889.1| DEAD/DEAH box helicase-like protein [Sulfurimonas denitrificans DSM
1251]
Length = 432
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 232/370 (62%), Gaps = 4/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F++LG+ L+ A +++G++ P+ IQ AIP L D+ AQTG+GKT AF L +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +++++ A V++PTREL+IQI E ++ + + AVLVGG D+ Q
Sbjct: 62 RLRKTSDDKQR--ALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKI 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + IV+ATPGR+++H+ KG SL ++ VLDEADR+L+ F K + I ++P+
Sbjct: 120 LKEGVDIVIATPGRVLEHVD--KGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKR 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
QT LFSAT + KV+KL + L P IE + K STVDT+ Q V + K L YI+
Sbjct: 178 HQTLLFSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQVAYLVDTEKKAPLLAYII 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VFTRT + LL + L+ G + I G +Q+ RL LN+FK G+ +L+
Sbjct: 238 GSRNFRQVLVFTRTKASADLLVVELKKDGLKCGIIHGDKTQANRLKTLNEFKEGKIKVLV 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRGLDI + VINY++P+ +DY+HRVGRT RAGR G+AISL++ YE I
Sbjct: 298 ATDIASRGLDIEELPFVINYELPSIPEDYVHRVGRTGRAGRDGMAISLIDIYEKFDIKDI 357
Query: 369 EKLIGKKLPE 378
EKLIG K+P+
Sbjct: 358 EKLIGMKIPQ 367
>gi|408489495|ref|YP_006865864.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
gi|408466770|gb|AFU67114.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
Length = 423
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 230/368 (62%), Gaps = 3/368 (0%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK LGL + LV+A + G+ TP+ IQ ++IP LEGKD++ AQTG+GKT F LP+LQ
Sbjct: 3 FKSLGLSEALVKAVSSQGYDTPTPIQEKSIPAVLEGKDVLASAQTGTGKTAGFTLPLLQ- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL R P A +L+PTRELA Q+ + + G + LR V+ GGV+ Q L
Sbjct: 62 LLSQTPPLRNRPVR-ALILTPTRELAAQVHQSVKDYGKFVDLRSTVIFGGVNQKSQVSTL 120
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
++VATPGRL+D L N SL ++ LVLDEADR+L+ F + + +I+ +IP+ R
Sbjct: 121 RNGVDVLVATPGRLID-LNNQGLLSLAKVEILVLDEADRMLDMGFLRDIKKIMKLIPKQR 179
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSAT +++++ L LKNPV +E+ + +TV+ ++QQ V + K L+ +++
Sbjct: 180 QTLLFSATFSREIRSLASEFLKNPVSVESTPENTTVEAIEQQVYRVAKEKKTDLLIKLIS 239
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E + +VF+RT LA L A I G+ SQ R AL FK+G +L+
Sbjct: 240 EGNWEQVLVFSRTKHGANKLAKKLEAAKIGAAAIHGNKSQGARTKALAGFKSGSVKVLVA 299
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+ASRGLDIP + V+N+++P S+DY+HR+GRT RAG +G+A+SLV+ E + IE
Sbjct: 300 TDIASRGLDIPLLPYVVNFELPNVSEDYVHRIGRTGRAGASGLAVSLVSADETVFLKDIE 359
Query: 370 KLIGKKLP 377
KLIG K+P
Sbjct: 360 KLIGDKIP 367
>gi|418528845|ref|ZP_13094787.1| hypothetical protein CTATCC11996_04137 [Comamonas testosteroni ATCC
11996]
gi|371454106|gb|EHN67116.1| hypothetical protein CTATCC11996_04137 [Comamonas testosteroni ATCC
11996]
Length = 473
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 230/376 (61%), Gaps = 5/376 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A ++G+++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLHLAEPLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ EN PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLMR-HENASASPARHPVRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TIELKKGVEVLVATPGRLLDHI-EAKNVVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L++PV IE A T T++Q++ V K +
Sbjct: 182 PKSRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARPNETASTVEQRFYKVTDDDKRYAIR 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L E +F+ + L L G RA + G SQ +RL AL FKAGE +
Sbjct: 242 SVLKERDIRQAFIFSNSKLGCARLTRALERDGLRAAALHGDKSQDERLKALEAFKAGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V NYD+P N++DY+HR+GRT RAG +G+A++LV ++
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGLAVTLVTDHDSRNV 361
Query: 366 LQIEKLIGKKLPEFPA 381
IEKLI KK+ PA
Sbjct: 362 ADIEKLIKKKIDVEPA 377
>gi|164659074|ref|XP_001730662.1| hypothetical protein MGL_2458 [Malassezia globosa CBS 7966]
gi|159104558|gb|EDP43448.1| hypothetical protein MGL_2458 [Malassezia globosa CBS 7966]
Length = 452
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 256/450 (56%), Gaps = 47/450 (10%)
Query: 26 VGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFA 85
V P+ IQ+ IP LEG+D+IG A+TGSGKT AFALPIL L + TV +A
Sbjct: 2 VAINVPTPIQSACIPAILEGRDVIGGAETGSGKTLAFALPILHNLF-----KDTV-GGYA 55
Query: 86 CVLSPTRELAIQISEQFEALGSG--ISLRCAVLVGGVDMMQQTLALG-KRPHIVVATPGR 142
+L+PTREL +Q+ EQF A+G G + L+CA+++GG+DM +Q LG +RPHI+VATPGR
Sbjct: 56 VILTPTRELGVQLHEQFLAVGQGSRMGLKCALVLGGMDMTRQANELGEQRPHIIVATPGR 115
Query: 143 LMDHLTN--TKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATM 198
L+D L++ + + L K++VLDEADRLL+ F +L + +++P MRQT LF+AT+
Sbjct: 116 LVDLLSSGAAQEWGLERCKFVVLDEADRLLSPTFAPALAYLFSILPPAHMRQTLLFTATL 175
Query: 199 TKKVKKLQRACLKN----PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT----- 249
T ++++L + P+ + ST D+L QQY VP+ ++ YLVY+L
Sbjct: 176 TPEIERLTEKTPEPGKLPPLLRKIDMDTSTPDSLIQQYTLVPSHMREPYLVYLLNNPPCE 235
Query: 250 -------------------------EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 284
E S T++F C LL+ ML LG + +
Sbjct: 236 NKVKVHAELSDVYRTHKAPKIKGGEEPSFPLTIIFVSRCKNAELLSRMLTELGIPNVSLH 295
Query: 285 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 344
+ Q RL L F+A ILI TDV SRGLD+P V++V+N+D+P +DYIHRVGRT
Sbjct: 296 SMLPQFTRLHNLQMFRARRVPILISTDVGSRGLDVPDVELVVNWDVPAAWEDYIHRVGRT 355
Query: 345 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 404
AR GR G A+S V ++++E IE I K+L E E +VL L ++ AKR++ M +
Sbjct: 356 ARKGRRGWAVSFVTEHDVELIQAIEAKIHKRLDELELPEAQVLDRLSHISAAKRVASMEL 415
Query: 405 KDSGNKRRRKGGDEDDDIGRQFGINKKKLS 434
D +R+ I + +K KLS
Sbjct: 416 HDEKFGEQRERNKRKAKIAQGGKRSKHKLS 445
>gi|401840618|gb|EJT43365.1| DBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 437
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 252/429 (58%), Gaps = 22/429 (5%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M+E + FK LGL L E+ + + P+ IQ IP LEG+D IG A+TGSGKT
Sbjct: 1 MSELSKTTDFKSLGLSKWLTESLKAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTI 60
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFA P+L E F VL+PTRELA+QI+EQF ALGS +++R +V+VGG
Sbjct: 61 AFAGPMLTKWSE------DPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVVVGGE 114
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKS 177
++QQ LAL ++PH ++ATPGRL H+ ++ ++ L KYLVLDEAD LL F
Sbjct: 115 SIIQQALALQRKPHFIIATPGRLAHHIMSSGEDTVRGLMRAKYLVLDEADILLTSTFADH 174
Query: 178 LDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLK 229
L + +P RQT LF+AT+T +V+ LQ A + K P+ ++E+ + TLK
Sbjct: 175 LATCIGALPAKDKRQTLLFTATITDQVRSLQDAPVQEGKPPLFAYQVESVDNVAIPSTLK 234
Query: 230 QQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHM 287
+Y VP K+ YL +LT E + ++F +L L+ L R + M
Sbjct: 235 TEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQM 294
Query: 288 SQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARA 347
Q +R +L++F+A +LI TDVASRGLDIP+V++V+NYDIP++ +IHR GRTARA
Sbjct: 295 PQQERTNSLHRFRANAARVLIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARA 354
Query: 348 GRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTI- 404
GR G AIS V Q ++ IE I KK+ E + ++ L +VT+AKR S M +
Sbjct: 355 GRNGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKALTKVTKAKRESLMAMQ 414
Query: 405 KDSGNKRRR 413
K++ +R+R
Sbjct: 415 KENFGERKR 423
>gi|171686908|ref|XP_001908395.1| hypothetical protein [Podospora anserina S mat+]
gi|170943415|emb|CAP69068.1| unnamed protein product [Podospora anserina S mat+]
Length = 576
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 186/432 (43%), Positives = 266/432 (61%), Gaps = 36/432 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LG+R LV++ N+ K P+ IQ E+IP L+G+D IG ++TGSGKT AF++PILQ
Sbjct: 146 TFESLGVRPWLVQSLANMAIKRPTAIQRESIPMLLKGRDCIGGSRTGSGKTVAFSVPILQ 205
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ AEN A F +L+PTRELA+QI EQ +A+ S SL+ ++ GG DM Q +A
Sbjct: 206 ---QWAENPS---AIFGVILTPTRELALQIFEQVKAISSPHSLKAILVTGGADMRAQAIA 259
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS----LGTLKYLVLDEADRLLNDDFEKSL----DE 180
L +RPHIV+ATPGRL DH+ T G+ LG ++++VLDEADRLL D+ S+ +E
Sbjct: 260 LAQRPHIVIATPGRLADHI-RTSGYDTVCGLGRVRFVVLDEADRLLADNGPGSMLPDVEE 318
Query: 181 ILNVIP--RMRQTYLFSATMTKKV---KKLQRACLKNPVKI--EAASKYSTVDTLKQQYR 233
L+ +P RQT LF+AT+T++V K + R + PV + K + TLKQ +
Sbjct: 319 CLSALPPAEKRQTLLFTATITQEVMALKNMPRKPGREPVFVCEVDTEKLAIPPTLKQMHL 378
Query: 234 FVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +++ YL +++LTE + S ++F L +LR L R + + Q +
Sbjct: 379 QVPVTHREHYLHMFLLTEQNVHKSIIIFCNRTSTADFLHHLLRLLDHRITSLHSKLPQRQ 438
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R+ L +F+A IL+ TDVA+RGLDIP V MVINYDIP + DYIHRVGRTARAGR G
Sbjct: 439 RIDNLGRFRASAARILVATDVAARGLDIPEVKMVINYDIPRDPDDYIHRVGRTARAGRKG 498
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-------LLERVTEAKRISQMTI 404
A++ V Q +++ L IE +G+K+ + EEE V L L+ V+E KR + + +
Sbjct: 499 DAVTFVGQRDVDLVLAIEDRVGRKMEAW--EEEGVNLETRVVREALKLVSEKKREALLEL 556
Query: 405 ---KDSGNKRRR 413
K+ G KR+R
Sbjct: 557 EEGKEVGGKRKR 568
>gi|383455776|ref|YP_005369765.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
gi|380732540|gb|AFE08542.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
Length = 484
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 227/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL L D L++A + G+ TP+ IQA+AIPHAL GKD++G+AQTG+GKT AFALPILQ
Sbjct: 2 TFDELQLTDSLLKAVKAEGYTTPTPIQAKAIPHALAGKDVLGVAQTGTGKTAAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L A P VL+PTRELA Q+S+ F G + LR AV+ GGV Q A
Sbjct: 62 RLSAKAPAGGARP-VRCLVLTPTRELASQVSDSFATYGKNLPLRHAVVFGGVGQNPQVQA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L + I+VATPGRL+D + +GF +L L+ VLDEADR+L+ F + ++ V+P
Sbjct: 121 LRQGVDILVATPGRLLDLID--QGFVTLRALEVFVLDEADRMLDMGFIHDVRRVIKVLPP 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
+RQT FSAT+ + L R LK PV++E + ST DT+ QQ FV + K L ++
Sbjct: 179 VRQTLFFSATLPPDIMDLARNILKEPVRVEVSPASSTADTVSQQVYFVEREEKRALLTHL 238
Query: 248 LTEVSA-SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
L + A +VFTRT +A L G RA I G+ SQ+ R AL++F+AG +
Sbjct: 239 LQDAKAIPRALVFTRTKHGANRVAKQLTAAGVRADAIHGNKSQNARERALDEFRAGTLRV 298
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RG+DI + V NYD+P + Y+HR+GRT RAG +G A+S + E +
Sbjct: 299 LVATDIAARGIDIDGLSHVFNYDLPNVPEQYVHRIGRTGRAGASGQAVSFCDSEERAYLR 358
Query: 367 QIEKLIGKKLP 377
IE+ I + +P
Sbjct: 359 DIERTIRRSVP 369
>gi|431792618|ref|YP_007219523.1| DNA/RNA helicase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782844|gb|AGA68127.1| DNA/RNA helicase, superfamily II [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 500
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 227/370 (61%), Gaps = 7/370 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ TFKELGL + L+++ N+G++ + IQ + IP ALEGKD+IG AQTG+GKT AF +P+
Sbjct: 1 MSTFKELGLSEPLIKSVLNMGFEEATPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGIPL 60
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+Q + E +E+ VL+PTRELA+Q++E+ +G +R + GG ++ +Q
Sbjct: 61 IQKIAETSED------IQGIVLTPTRELAVQVAEELNKIGQFKGIRTLPIYGGQEIDRQI 114
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL KRPHI+VATPGRLMDH+ + L + ++LDEAD +LN F + ++ IL IP
Sbjct: 115 RALKKRPHIIVATPGRLMDHMRR-RTIRLQNINMVILDEADEMLNMGFVEDIETILQEIP 173
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSATM ++++ L + +K+P I K TV ++Q Y VP K K L
Sbjct: 174 EARQTLLFSATMPRQIQNLAQKFMKDPELISIKGKEVTVANIEQDYLEVPEKMKFDVLCR 233
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L S +VF RT L+ L G A I G +SQSKR + +FK G +
Sbjct: 234 LLDIQSPDLAIVFGRTKSRVDELSEALNKRGYSAEGIHGDLSQSKRDSVMRQFKEGSIEV 293
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI V V N+DIP + + Y+HR+GRT RAG+TG+A++ V E+
Sbjct: 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGLAVTFVTPREIGHLR 353
Query: 367 QIEKLIGKKL 376
IE+L +K+
Sbjct: 354 LIEQLTKRKI 363
>gi|221065648|ref|ZP_03541753.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
gi|220710671|gb|EED66039.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
Length = 473
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 230/376 (61%), Gaps = 5/376 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A ++G+++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLHLAEPLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ EN PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLMR-HENASASPARHPVRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNVVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L++PV IE A T T++Q++ V K +
Sbjct: 182 PKSRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARPNETASTVEQRFYKVSDDDKRYAIR 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L E +F+ + L L G RA + G SQ +RL AL FKAGE +
Sbjct: 242 SVLKERDIRQAFIFSNSKLGCARLTRALERDGLRAGALHGDKSQDERLKALEAFKAGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V NYD+P N++DY+HR+GRT RAG +G+A++LV ++
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGLAVTLVTDHDSRNV 361
Query: 366 LQIEKLIGKKLPEFPA 381
IEKLI KK+ PA
Sbjct: 362 ADIEKLIKKKIDVEPA 377
>gi|251780900|ref|ZP_04823820.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243085215|gb|EES51105.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 432
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 244/420 (58%), Gaps = 21/420 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L + + + +A G+ P+ IQ ++IP LEGKD +G AQTG+GKT AFA+P+LQ
Sbjct: 3 FKDLNIIEPIQKALTEAGYTNPTPIQEQSIPSLLEGKDFLGCAQTGTGKTAAFAIPVLQ- 61
Query: 70 LLEIAENQ------RTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
IA+NQ RT+ A +L+PTRELAIQI E F +++ V+ GGV
Sbjct: 62 --NIAKNQNKSDKSRTIKAL---ILAPTRELAIQIEENFTLYSKHTNIKNTVIFGGVSQK 116
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
QT LG+ I++ATPGRL+D L + K L +K+ VLDEADR+ + + + +I+
Sbjct: 117 PQTRILGEGVDILIATPGRLLD-LIDQKYIDLSNVKHFVLDEADRMFDMGMVRDVKKIVA 175
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P++RQ LFSATM +VK L + LK+PVK+E A ST+DT+ Q FV K K
Sbjct: 176 KLPKVRQNLLFSATMPSEVKSLVNSILKDPVKVEVAPVSSTIDTITQGVYFVTKKDKKSL 235
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LV++L + S S +VF+RT + L G + I G+ SQ+ R AL+ FK G+
Sbjct: 236 LVHLLKDESIKSLLVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGK 295
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TD+A+RG+D+ + VINYD+P + Y+HR+GRT RAG +GVAIS + E
Sbjct: 296 IRVLVATDIAARGIDVDGLSHVINYDLPDVPETYVHRIGRTGRAGNSGVAISFCDVDEKS 355
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS--------GNKRRRKG 415
IEK IGK +P E E + + + K + T + G+KRR +G
Sbjct: 356 ALKDIEKTIGKNIPVMKNVEFERIAITREPAQRKEADKKTTDANKKPKRNWYGDKRRSQG 415
>gi|340786226|ref|YP_004751691.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
gi|340551493|gb|AEK60868.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
Length = 506
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 225/370 (60%), Gaps = 5/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F + GL +++ A + G+ P+ IQAEAIP L+G+D++G AQTG+GKT F+LPI+Q
Sbjct: 30 FADFGLSPDILRALNDQGYVHPTPIQAEAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQL 89
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LL A N PA A +L+PTRELA Q++E +A LR V+ GGVD+ QT
Sbjct: 90 LLAHA-NTSASPARHPVRALILTPTRELADQVAENVKAYCRHTPLRSTVVFGGVDIAPQT 148
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL IV+ATPGRL+DH+ K +L + LV+DEADR+L+ F L I+N++P
Sbjct: 149 AALRSGIEIVIATPGRLLDHVQQ-KTLNLSQTQILVMDEADRMLDMGFLPDLQRIINLLP 207
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ +FSAT + ++KKL LKNPV IE A +T D + Q V + K + Y
Sbjct: 208 KERQNLMFSATFSGEIKKLAATFLKNPVTIEVARSNATADNVTQTMYHVNEQTKAEAVSY 267
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
I+ E + +VF+ T LA L N G A I G +Q++R+ AL FK GE +
Sbjct: 268 IIRERNLKQVIVFSNTKIGASKLARHLENEGVNASAIHGDKTQNERMAALEAFKRGEIEV 327
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G AISL + +
Sbjct: 328 LVATDVAARGLDIAELPCVINFDLPYNAEDYVHRIGRTGRAGASGDAISLYADKDERLLV 387
Query: 367 QIEKLIGKKL 376
IEK+I K
Sbjct: 388 DIEKMIKYKF 397
>gi|350272013|ref|YP_004883321.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
gi|348596855|dbj|BAL00816.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
Length = 435
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 247/430 (57%), Gaps = 9/430 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL L +++A + G+ TP+ IQ +AIP L+ +DLIG AQTG+GKT AFALPILQ
Sbjct: 2 TFKELNLTAPILKAVDRQGYTTPTPIQQKAIPILLQKRDLIGCAQTGTGKTAAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L +E ++ + A +L+PTRELAIQI E FE G+ + LRC V+ GGV + Q
Sbjct: 62 NL--ASERRKGIKAL---ILTPTRELAIQIQENFEHYGTHLPLRCTVIFGGVSQVPQVER 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I++ATPGRL D L N + ++ VLDEADR+L+ F + + ++LN +P+
Sbjct: 117 LRRGVDILIATPGRLCD-LINQGYVDISQIEVFVLDEADRMLDMGFIRDVKKVLNALPKK 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM K+++ L L +PV ++ ST ++ Q + K L +L
Sbjct: 176 RQTLLFSATMPKEIEVLANTILHDPVTVKVDPVTSTASSIHQHVYLIDKGNKRRLLAKLL 235
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VFTRT A + L G A+ I G+ SQ+ R AL +FK+G+ IL+
Sbjct: 236 RGREVGSALVFTRTKHAADKVVKELAETGMVAMAIHGNKSQNARQTALKRFKSGDIKILV 295
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DIP + V NY++P + YIHR+GRT RAG GVAIS + E+ + I
Sbjct: 296 ATDIAARGIDIPELSHVFNYELPNEPETYIHRIGRTGRAGLGGVAISFCDYDEIPYLKDI 355
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRI---SQMTIKDSGNKRRRKGGDEDDDIGRQ 425
EKL+G+ +PE +E +L KR + T + +R + R
Sbjct: 356 EKLMGQTIPEEKSEWPMTILQKSEKAPQKRYGFGNPHTTATAKPRRSHAPASDPFSYARP 415
Query: 426 FGINKKKLSK 435
G++ ++ S+
Sbjct: 416 HGVSARQHSR 425
>gi|291614701|ref|YP_003524858.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291584813|gb|ADE12471.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 450
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 168/371 (45%), Positives = 230/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +L L +++A G+ TP+ IQA+AIP ALEG DL+ AQTG+GKT AFALP+LQ
Sbjct: 5 SFVDLKLAPPILKALTEAGYVTPTPIQAQAIPLALEGHDLMAGAQTGTGKTAAFALPMLQ 64
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + T PA A +L PTRELA+Q+ E +A +LR V+ GGVD+ Q
Sbjct: 65 KLLPHA-SASTSPAKHPVRALILVPTRELAVQVEESVKAYAKHTNLRSLVVYGGVDIKTQ 123
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T L I+VATPGRL+DH+ K L ++ LVLDEADR+L+ F +L IL ++
Sbjct: 124 TPHLKTGVEILVATPGRLLDHIEQ-KTVLLNQVQMLVLDEADRMLDMGFMPALKRILALL 182
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
PR RQ+ +FSAT + ++KKL + P IE A ++ + + Q+ V K L
Sbjct: 183 PRQRQSLMFSATFSNEIKKLSEDFMNYPTLIEVARSNASAENITQKVYLVEQSGKHQLLA 242
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L A +VFT+T LA L+ G A I G SQ +R+ AL+ FK G
Sbjct: 243 QLLRGDDAKQVIVFTKTKLTASRLAKQLQREGVSADAIHGDKSQLERMQALDAFKQGRVA 302
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+LI TDVA+RGLDI S+ MVINY+IP ++DY+HR+GRT RAG +G AISLV+ E ++
Sbjct: 303 VLIATDVAARGLDIDSLPMVINYEIPHAAEDYVHRIGRTGRAGASGTAISLVSPEEEKYL 362
Query: 366 LQIEKLIGKKL 376
L+IEKLI K++
Sbjct: 363 LEIEKLIKKEI 373
>gi|89901799|ref|YP_524270.1| DEAD/DEAH box helicase-like protein [Rhodoferax ferrireducens T118]
gi|89346536|gb|ABD70739.1| DEAD/DEAH box helicase-like [Rhodoferax ferrireducens T118]
Length = 506
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 229/370 (61%), Gaps = 5/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L L L A ++G++T + IQA+AIP L+G+D++G AQTG+GKT AFALP+LQ
Sbjct: 17 FAQLQLAAPLARAVADMGYETMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFALPLLQR 76
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+L+ EN T PA A VL PTRELA Q+++ + +LR AV+ GG+DM QT
Sbjct: 77 MLK-HENSSTSPARHPVRALVLLPTRELADQVAQAIKDYAVHTNLRSAVVFGGMDMKPQT 135
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +P
Sbjct: 136 LELKKGVEVLVATPGRLLDHI-EAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLP 194
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ R T LFSAT + ++K+L + L++PV IE A + T++Q + V A K L
Sbjct: 195 KQRITLLFSATFSSEIKRLASSYLQDPVTIEVARSNAAASTVEQHFYSVDADDKRHALHQ 254
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
IL VF + LA L + G + + G SQ +RL AL FK+GE ++
Sbjct: 255 ILKSRGMKQAFVFVNSKLGCARLARSLEHEGLKTTALHGDKSQDERLKALEAFKSGEVDL 314
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+CTDVA+RGLDI V V N+DIP N++DY+HR+GRT RAG G+A+S V + ++
Sbjct: 315 LVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGAAGLAVSFVAKSDIRLVA 374
Query: 367 QIEKLIGKKL 376
IEKL+ K+
Sbjct: 375 DIEKLLNTKI 384
>gi|375145001|ref|YP_005007442.1| DEAD/DEAH box helicase [Niastella koreensis GR20-10]
gi|361059047|gb|AEV98038.1| DEAD/DEAH box helicase domain protein [Niastella koreensis GR20-10]
Length = 419
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 224/370 (60%), Gaps = 2/370 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ L + + ++ A N G+ TP+ IQ +AIP L+ KDL G A+TG+GKT AFA+P+LQ
Sbjct: 2 SFQNLNVIEPILRALNNEGYTTPTPIQEQAIPLVLQRKDLFGCARTGTGKTAAFAIPVLQ 61
Query: 69 ALLEIAENQRTVPAFF-ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L E + + A +L+PTRELAIQI E +A G LR AV+ GGV Q
Sbjct: 62 ILHEQKQAAKAPDNTIKALILTPTRELAIQIKESLDAYGKFTGLRHAVIFGGVSQQAQVT 121
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L + I+VATPGRL+D L + + +LG+++ L+LDEADR+L+ F + +I+ +P+
Sbjct: 122 TLRRGVDILVATPGRLLD-LIDQRFVNLGSIRLLILDEADRMLDMGFVHDVKKIMAKVPK 180
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSATM +++L L NPV IE ST +T++Q FVP K L ++
Sbjct: 181 QRQTLFFSATMAPAIRQLANTLLTNPVSIEVTPVSSTAETVRQAVYFVPKTSKQSLLKHL 240
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + +VFTRT +A L N G A I G+ SQ R AL KF++ + +L
Sbjct: 241 LADTDIPMALVFTRTKHGADRVAKELNNFGISAAAIHGNKSQQARQTALLKFRSRQIQVL 300
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RG+DI + VINYD+P ++ Y+HR+GRT RAG G+A+S +Q E +
Sbjct: 301 VATDIAARGIDIDELSHVINYDLPEVAETYVHRIGRTGRAGANGMAVSFCDQEEKAYLRD 360
Query: 368 IEKLIGKKLP 377
IEKLI K +P
Sbjct: 361 IEKLIKKSVP 370
>gi|400602623|gb|EJP70225.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 545
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 185/431 (42%), Positives = 256/431 (59%), Gaps = 34/431 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LG+R LV++ N+ + P+ IQ +P L G+D IG ++TGSGKT AFA+P+LQ
Sbjct: 115 TFAALGVRPWLVQSLANMAIRRPTGIQKGCVPEILRGRDCIGGSRTGSGKTVAFAVPMLQ 174
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E A F VL+PTRELA+QI EQF A+ + SL+ ++ GG DM Q +A
Sbjct: 175 KWAEDPS------AVFGVVLTPTRELALQIYEQFRAVAAPQSLKVVLITGGADMRPQAIA 228
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSL----DE 180
L +RPHI++ATPGRL DH+ T G L ++++VLDEADRLL+ S+ +E
Sbjct: 229 LKQRPHIIIATPGRLADHV-RTSGEDTVCGLRRVRFIVLDEADRLLHAAGPGSMLPDVEE 287
Query: 181 ILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPVKI-EAASKYSTVDTLKQQYRF 234
L+V+P RQT LF+ATMT +V+ L+ R K PV + E ++ V QY
Sbjct: 288 CLSVLPPPTERQTLLFTATMTPEVRALEAMPRKPGKQPVFVCEVDTQTLAVPATLSQYHL 347
Query: 235 -VPAKYKDCYL-VYILTEVSASSTMVF--TRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
VP +K+ YL V +LTE + T++ RT A L MLR L R + + Q
Sbjct: 348 QVPVTHKEHYLHVLLLTEANVGKTVILFCNRTATAD-FLHHMLRLLDHRVTSLHSKLPQR 406
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
+R+ L +F+A ILI TDVA+RGLDIP V +VINYD+P + DYIHRVGRTARAGR
Sbjct: 407 QRIDNLARFRASAARILIATDVAARGLDIPEVSLVINYDVPRDPDDYIHRVGRTARAGRA 466
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFPAE----EEEVLL-LLERVTEAKRISQMTI- 404
G A++ V Q ++E L IEK +G+ + + E E VL L+ V+E KR + + +
Sbjct: 467 GEAVTFVGQRDVELVLAIEKRVGRDMEAWAEEGVNLETRVLRDALKTVSEKKREALLEVE 526
Query: 405 --KDSGNKRRR 413
K+ G KR+R
Sbjct: 527 ENKEVGGKRKR 537
>gi|333916134|ref|YP_004489866.1| DEAD/DEAH box helicase domain-containing protein [Delftia sp.
Cs1-4]
gi|333746334|gb|AEF91511.1| DEAD/DEAH box helicase domain protein [Delftia sp. Cs1-4]
Length = 504
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 228/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A ++G+++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ EN PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLMR-HENTSASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSHL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L++PV IE A T T++Q++ V K L
Sbjct: 182 PKTRTTLLFSATFSPEIKRLASSYLQDPVTIEVARPNETASTVEQRFYSVSDDDKRYALR 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + VF+ + L L G RA + G SQ +RL AL FK GE +
Sbjct: 242 SLLKQRDIRQAFVFSNSKLGCARLTRALERDGLRATALHGDKSQDERLKALEAFKRGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V NYD+P N++DY+HR+GRT RAG +G+A++LV ++
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGIAVTLVTNHDARLV 361
Query: 366 LQIEKLIGKKL 376
+IEKLI KK+
Sbjct: 362 GEIEKLIKKKI 372
>gi|295671282|ref|XP_002796188.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284321|gb|EEH39887.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 543
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/415 (42%), Positives = 247/415 (59%), Gaps = 34/415 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + K P+ IQ IP L+G+D IG ++TGSGKT AFA PILQ
Sbjct: 114 SFATLGLAPWLVGSLSAMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPILQ 173
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E FA VL+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q +A
Sbjct: 174 KWSEDPL------GIFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIA 227
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLND---DFEKSLDEI 181
L +RPH+V+ATPGRL DH+ N+ G L +++VLDEADRLL L+
Sbjct: 228 LSQRPHVVIATPGRLADHI-NSSGRDTICGLNRARFVVLDEADRLLESGPGSMLPDLETC 286
Query: 182 LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYR 233
L+ +P RQT LF+AT+T +V+ L+ R K P+ +I ++ + TLKQ Y
Sbjct: 287 LSALPPSTARQTLLFTATVTPEVRALKSMPRPASKPPIFVTEISTENQATIPRTLKQSYL 346
Query: 234 FVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +++ +L +L+ SS ++F LL MLR LG RA + + QS+
Sbjct: 347 LVPLTHREAFLHVLLSTEGNSSKAAIIFCNRTKTADLLERMLRRLGHRATSLHSLLPQSE 406
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R L++F+A IL+ TDVA+RGLDIPSV +VIN+D+P N DY+HRVGRTARAGR G
Sbjct: 407 RTANLSRFRASAAPILVATDVAARGLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGREG 466
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
A++LV Q +++ L IE +G+K+ E+ +EE V + +L+ V EAKR
Sbjct: 467 EAVTLVGQRDVQLVLAIEDRVGRKMEEW--KEEGVSIEGRIVRGGILKEVGEAKR 519
>gi|188587881|ref|YP_001922673.1| putative ATP-dependent RNA helicase RhlE [Clostridium botulinum E3
str. Alaska E43]
gi|188498162|gb|ACD51298.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E3 str.
Alaska E43]
Length = 432
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 243/420 (57%), Gaps = 21/420 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L + + + +A G+ P+ IQ ++IP LEGKD +G AQTG+GKT AFA+P+LQ
Sbjct: 3 FKDLNIIEPIQKALTEAGYTNPTPIQEQSIPSLLEGKDFLGCAQTGTGKTAAFAIPVLQ- 61
Query: 70 LLEIAENQ------RTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
IA+NQ RT+ A +L+PTRELAIQI E F +++ V+ GGV
Sbjct: 62 --NIAKNQNKSDKSRTIKAL---ILAPTRELAIQIEENFTLYSKHTNIKNTVIFGGVSQK 116
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
QT LG+ I++ATPGRL+D L + K L +K+ VLDEADR+ + + + +I+
Sbjct: 117 PQTRILGEGVDILIATPGRLLD-LIDQKYIDLSNVKHFVLDEADRMFDMGMVRDVKKIVA 175
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P++RQ LFSATM +VK L + LK+PVK+E A ST+DT+ Q FV K K
Sbjct: 176 KLPKVRQNLLFSATMPSEVKSLVNSILKDPVKVEVAPVSSTIDTITQGVYFVTKKDKKSL 235
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LV++L + S S +VF+RT + L G + I G+ SQ+ R AL+ FK G+
Sbjct: 236 LVHLLKDESIKSLLVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGK 295
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TD+A+RG+D+ + VINYD+P + Y+HR+GRT RAG +GVAIS + E
Sbjct: 296 IRVLVATDIAARGIDVDGLSHVINYDLPDVPETYVHRIGRTGRAGNSGVAISFCDVDEKS 355
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS--------GNKRRRKG 415
IEK IGK +P E E + + + K + T + G KRR +G
Sbjct: 356 SLKDIEKTIGKNIPVMKNVEFERIAITREPAQRKEADKKTTDANKKPKRNWYGEKRRSQG 415
>gi|254580331|ref|XP_002496151.1| ZYRO0C11660p [Zygosaccharomyces rouxii]
gi|238939042|emb|CAR27218.1| ZYRO0C11660p [Zygosaccharomyces rouxii]
Length = 435
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 247/416 (59%), Gaps = 20/416 (4%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E VK+FK LG+ LVE + P+ IQ+ IP L+G+D IG A+TGSGKT AF
Sbjct: 3 EGSVKSFKILGVSKWLVETLNAMKISQPTTIQSACIPEILKGRDCIGGAKTGSGKTIAFG 62
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
P+L E F VL+PTRELA+QI+EQF ALGS +++R +++VGG D++
Sbjct: 63 APMLTKWSE------DPCGMFGVVLTPTRELAMQIAEQFTALGSNMNIRVSIIVGGEDIV 116
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDE 180
+Q L L ++PH ++ATPGRL H+ N+ ++G L K+LVLDEAD LL F K L
Sbjct: 117 KQGLELQRKPHFIIATPGRLAHHILNSGDDTVGGLIRTKFLVLDEADSLLTGTFAKDLAI 176
Query: 181 ILNVIP--RMRQTYLFSATMTKKVKKLQRACL--KNPV---KIEAASKYSTVDTLKQQYR 233
+ +P RQT LF+AT+T +V+ L+ A K P+ ++ + K + +LK +Y
Sbjct: 177 CIGALPPKNKRQTLLFTATVTDQVRALENAPSEGKPPLFTYEVASMDKVAIPSSLKTEYI 236
Query: 234 FVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP K+ YL +LT + S+ MVF A +L L +G R + M Q +
Sbjct: 237 LVPEYVKEAYLYQLLTCEDYKDSTAMVFVNRTMAAEILRRTLYAMGVRVTSLHSQMPQQE 296
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R +L++F+A +LI TDVASRGLDIP+V +V+NYDIP++ +IHR GRTARAGR G
Sbjct: 297 RTNSLHRFRANAARVLIATDVASRGLDIPTVQLVVNYDIPSDPDVFIHRSGRTARAGRRG 356
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL--LERVTEAKRISQMTIK 405
AIS + Q ++ IE+ I KK+ E + ++ L VT+AKR S M ++
Sbjct: 357 DAISFITQRDISRIQAIEERINKKMGECDKVHDTAVIRKSLNSVTKAKRESLMAME 412
>gi|156844185|ref|XP_001645156.1| hypothetical protein Kpol_1062p5 [Vanderwaltozyma polyspora DSM
70294]
gi|160380632|sp|A7TK63.1|DBP8_VANPO RecName: Full=ATP-dependent RNA helicase DBP8
gi|156115814|gb|EDO17298.1| hypothetical protein Kpol_1062p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 431
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 250/423 (59%), Gaps = 21/423 (4%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
++ FK LGL LVE+ + P+ IQ IP L+G+D IG A+TGSGKT AFA P+
Sbjct: 1 MQDFKSLGLSRWLVESLNAMRITHPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAFAGPM 60
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L ++ F VL+PTRELAIQI+EQF ALGS +++R ++VGG +++Q
Sbjct: 61 L------SQWSDDPSGMFGVVLTPTRELAIQIAEQFTALGSSMNIRVCLVVGGESIVKQA 114
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILN 183
L L K+PH ++ATPGRL H+ ++ +G L KYLVLDEAD +L F L +
Sbjct: 115 LELQKKPHFIIATPGRLAHHILSSGEEVVGGLSRVKYLVLDEADLILTQTFAADLSTCIA 174
Query: 184 VIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFV 235
+P + RQT LF+AT+T +V+ LQ A K P+ ++E + TLK +Y V
Sbjct: 175 KLPPKQKRQTLLFTATITDQVRALQNAPAQDSKPPLFAYEVENVDNVAVPSTLKLEYLLV 234
Query: 236 PAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P K+ YL +LT + SS +VF A +L LR+L R + M QS+R+
Sbjct: 235 PEHVKEAYLYQLLTCEDYKDSSVIVFVNRTTAAEVLRRTLRSLEVRVASLHSQMPQSERI 294
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
+L +F+A +LI TDVA+RGLDIP+V++VINYDIP + +IHR GRTARAGR+G A
Sbjct: 295 NSLQRFRANAARVLIATDVAARGLDIPTVELVINYDIPQDPDTFIHRSGRTARAGRSGDA 354
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTIKDSGNKR 411
IS V ++ IE+ I KK+ E + ++ L +VT+AKR S M ++ +
Sbjct: 355 ISFVTPRDVSRIEAIEERINKKMDECKKVHDTAVIRKALTKVTKAKRESLMDMEKANFGE 414
Query: 412 RRK 414
+RK
Sbjct: 415 KRK 417
>gi|355621610|ref|ZP_09046211.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
gi|354823417|gb|EHF07748.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
Length = 477
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 247/421 (58%), Gaps = 15/421 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L L L++A E G+ +PS IQ +AIPH L G+D++G AQTG+GKT AFALPI+Q
Sbjct: 3 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVLAGRDVLGCAQTGTGKTAAFALPIIQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L++ +E + + + +L+PTRELA+QI+E F+ GS S+RCAV+ GGV Q L
Sbjct: 63 LMKPSEKKYSKRVIRSLILTPTRELALQIAENFKEYGSRTSVRCAVIFGGVSANPQIEEL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ I+VATPGRL D + +GF L ++ VLDEADR+L+ F + +I++++P
Sbjct: 123 RRGIDILVATPGRLNDLVG--QGFVDLAHVEIFVLDEADRMLDMGFIHDVRKIISLLPVR 180
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT LFSATM +++ L L NP ++E STVD + +V + K LVY+L
Sbjct: 181 KQTLLFSATMPAEIQALTDKLLHNPARVEVTPVSSTVDIIDASLYYVDKENKRSLLVYLL 240
Query: 249 TEVSASSTMVFTRT-CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ST+VFTRT A R+ +++N A I G SQ R AL+ FK+GE +L
Sbjct: 241 NHEDITSTLVFTRTKHGADRVAKFLVKNRISAAA-IHGDKSQGARQTALSHFKSGEIQVL 299
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RG+DI + VIN+D+P + Y+HR+GRT RAG G AIS + E +
Sbjct: 300 VATDIAARGIDIEELSCVINFDLPNIPETYVHRIGRTGRAGLGGRAISFSDIEEKAYVKD 359
Query: 368 IEKLIGKKLP----------EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD 417
IEKL GK +P F +E RVT + T SG++ +++
Sbjct: 360 IEKLTGKAIPVVDTHPYPMAVFAVPPKETKPRPSRVTAKSSVKSQTKAQSGSQTKKRANT 419
Query: 418 E 418
+
Sbjct: 420 Q 420
>gi|332529740|ref|ZP_08405694.1| DEAD/DEAH box helicase-like protein [Hylemonella gracilis ATCC
19624]
gi|332040761|gb|EGI77133.1| DEAD/DEAH box helicase-like protein [Hylemonella gracilis ATCC
19624]
Length = 506
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 231/371 (62%), Gaps = 5/371 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K + +L L + L A ++G++T + IQA+AIP L G+D++G AQTG+GKT AF+LP+L
Sbjct: 18 KRYADLTLAEPLKRAVADMGYETMTPIQAQAIPVVLAGQDVMGAAQTGTGKTAAFSLPLL 77
Query: 68 QALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
Q LL+ EN T PA A VL PTRELA Q+++Q + LR AV+ GG+DM
Sbjct: 78 QRLLK-HENASTSPARHPVRALVLLPTRELADQVAQQVKMYAKYTHLRSAVVFGGMDMKP 136
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
QTL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+
Sbjct: 137 QTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSH 195
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ R T LFSAT + ++K+L + L+NP+ IE A +T T++Q + V K L
Sbjct: 196 LPKQRTTLLFSATFSPEIKRLASSYLQNPITIEVARSNATATTVEQHFYSVGEDDKRHAL 255
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+L + + VF + LA L G + + G SQ +RL AL+ FK GE
Sbjct: 256 RQVLRDKNLKQAFVFVNSKLGCARLARALERDGLKTAALHGDKSQDERLKALDAFKKGEV 315
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
++L+CTDVA+RGLDI V V N DIP N++DY+HR+GRT RAG GVA+S V+ +++
Sbjct: 316 DLLVCTDVAARGLDIKDVPAVFNIDIPFNAEDYVHRIGRTGRAGALGVAVSFVSPRDVKS 375
Query: 365 YLQIEKLIGKK 375
+IEKLI K
Sbjct: 376 VAEIEKLIKTK 386
>gi|421486785|ref|ZP_15934320.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
gi|400194954|gb|EJO27955.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
Length = 497
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 234/381 (61%), Gaps = 9/381 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL L+++ G+ P+ IQA+AIP +EG+D++G AQTG+GKT AF LPIL
Sbjct: 18 TFADFGLHPLLLQSIAETGYTIPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILH 77
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ +A N PA A +L+PTRELA Q+ E + LR AV+ GGVD+ Q
Sbjct: 78 RLMPLA-NASASPARHPVRALILTPTRELADQVYESVKRYSKQTPLRSAVVFGGVDIGPQ 136
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
AL + ++VATPGRL+DH+ K +L + LVLDEADR+L+ F L+ I+ ++
Sbjct: 137 KEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLL 195
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ LFSAT + +++KL R+ L +PV+IE A++ +T T+ Q + K +V
Sbjct: 196 PTQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATATTITQIAYKMSGDAKRAAVV 255
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+++ +VF+ T T LA L G +A I G +Q+ R+ AL FKAGE
Sbjct: 256 HLVKSRGLKQVIVFSNTKIGTARLARELERDGVKAESIHGDKTQADRMKALEAFKAGELE 315
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L E +
Sbjct: 316 VLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTPDEERFL 375
Query: 366 LQIEKLIGKKLP----EFPAE 382
L IEKLI +++P + PA+
Sbjct: 376 LDIEKLIKREVPRGTLDLPAD 396
>gi|409399600|ref|ZP_11249870.1| ATP-dependent RNA helicase [Acidocella sp. MX-AZ02]
gi|409131219|gb|EKN00931.1| ATP-dependent RNA helicase [Acidocella sp. MX-AZ02]
Length = 414
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 231/368 (62%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ GL ++ A G+ P+ IQA+AIPHAL G+D++G+AQTG+GKT AFALP++
Sbjct: 8 TFESFGLASPILGALTAAGFIKPTPIQAKAIPHALAGRDVLGIAQTGTGKTAAFALPMIN 67
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
A+ + ++R + A VL+PTRELA+QI ++ + +G+ LR ++VGGV Q
Sbjct: 68 AMTDRLHSKRF--STRALVLAPTRELAVQIEQEIKKFAAGLGLRTVLIVGGVSRFGQVQR 125
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ + IVV PGR++D L NT+ + ++ VLDEADR+L+ F + +++NV+P
Sbjct: 126 MMRGADIVVGCPGRVVD-LMNTRELVIDQCQFFVLDEADRMLDLGFMPDIRKVVNVLPAR 184
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ LFSATM ++ KL L+ PV++E + ST ++Q F K L+ +L
Sbjct: 185 RQSALFSATMPAEIAKLANGLLREPVRVEIEAVASTPSRIEQSVYFAEGPEKRNLLIKLL 244
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S T+VFTRT +ALML + A + G++SQ++R AL+ FKAGE L+
Sbjct: 245 HQPEFSKTVVFTRTKRGADRVALMLNSSKISAAALHGNLSQNQRQRALDAFKAGEVRALV 304
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ +V VIN+++P + Y+HR+GRTAR G GVA++ + EL + QI
Sbjct: 305 ATDIAARGIDVNAVSHVINFELPNEPESYVHRIGRTARNGADGVAVAFCDATELPYLTQI 364
Query: 369 EKLIGKKL 376
EKL G K+
Sbjct: 365 EKLTGIKM 372
>gi|319795121|ref|YP_004156761.1| dead/deah box helicase domain-containing protein [Variovorax
paradoxus EPS]
gi|315597584|gb|ADU38650.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus EPS]
Length = 496
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/381 (43%), Positives = 231/381 (60%), Gaps = 6/381 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G++T + IQ +AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L+ EN T PA A VL PTRELA Q+++Q + +LR V+ GG+DM Q
Sbjct: 64 RMLK-HENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSTVVFGGIDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NPV IE A T T++Q + V K L
Sbjct: 182 PKQRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARPNETASTVEQHFYSVSDDDKRRALK 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
I+ + + VF + LA L G R + G SQ +RL AL FKAGE +
Sbjct: 242 QIVKQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN-QYELEW 364
+L+CTDVA+RGLDI V V N+DIP N++DY+HR+GRT RAG +G+A+S + +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARL 361
Query: 365 YLQIEKLIGKKLPEFPAEEEE 385
IEKLI KK+ P E EE
Sbjct: 362 VADIEKLIKKKIELEPVEFEE 382
>gi|319778451|ref|YP_004129364.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
gi|397662231|ref|YP_006502931.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis ATCC
35865]
gi|317108475|gb|ADU91221.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
gi|394350410|gb|AFN36324.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis ATCC
35865]
gi|399115832|emb|CCG18635.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis
14/56]
Length = 442
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 230/372 (61%), Gaps = 5/372 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K FK+ G +++E G++ + IQA + LEG+D++G AQTG+GKT AF LPIL
Sbjct: 4 KNFKDFGFHSKILENISKTGYEYATPIQALSFEPILEGRDIMGAAQTGTGKTAAFTLPIL 63
Query: 68 QALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L+ A N T PA VL+PTRELA QIS+ G+ L+C+++ GGVD+
Sbjct: 64 NRLIPKA-NYSTSPAKHPVRMLVLTPTRELAEQISKNVNLYSDGLPLKCSLIYGGVDINS 122
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L + IV+ATPGRL+DH+ + +L +++LVLDEADR+L+ F L IL+
Sbjct: 123 QKQELMRGADIVIATPGRLLDHIEQ-RTVNLTQVEFLVLDEADRMLDMGFMPDLLRILSN 181
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ RQ+ L+SAT ++ ++ L + L NPV+I AS ST T+KQ+ V K+ L
Sbjct: 182 LPKSRQSLLYSATFSENIRSLAQKFLNNPVEITVASNNSTASTIKQEVYSVSESDKNAAL 241
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
VYILT + ++ ++F+ + L +L N + G SQ +R AL+ FK+ +C
Sbjct: 242 VYILTSRAFNNVIIFSNRKVTCKNLERLLNNYDLAVQSLHGDKSQLERTKALDLFKSSKC 301
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NIL+ TDVA+RGLDI VD VINY++P S+DY+HR+GRT RAG+ G+AISL + E +
Sbjct: 302 NILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGKKGIAISLCSSEEGKS 361
Query: 365 YLQIEKLIGKKL 376
+IE L G K
Sbjct: 362 LSEIETLTGLKF 373
>gi|348590558|ref|YP_004875020.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974462|gb|AEP36997.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 444
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 228/372 (61%), Gaps = 5/372 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K FKE G +++E N G+ + IQA + P LEG+D++G AQTG+GKT AF LP+L
Sbjct: 4 KEFKEFGFHSKILENISNTGYLHATPIQALSFPPILEGRDVMGAAQTGTGKTAAFTLPLL 63
Query: 68 QALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
++ A T PA VL+PTRELA QIS+ A G+ LR +++ GGVD
Sbjct: 64 NRMIPKASFS-TSPAKHPVRMLVLTPTRELAEQISKNVIAYADGLPLRTSLIYGGVDFNA 122
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L + IV+ATPGRL+DH+ + +L +++L+LDEADR+L+ F L +IL
Sbjct: 123 QKHELMRGADIVIATPGRLLDHVEQ-RTINLNQVEFLILDEADRMLDMGFMLDLLKILAQ 181
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P RQ+ L+SAT + ++ L + L +PV+I AS ST T+ Q+ V K+ L
Sbjct: 182 LPSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASNNSTASTITQEIFSVSEAEKNAAL 241
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+Y+L + ++ ++F+ + L L NL A + G +QS+R ALN FK+ +C
Sbjct: 242 LYLLASRNFNNVIIFSNRKITCKNLERYLNNLDLSAQSLHGDKTQSERTKALNLFKSSKC 301
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
NIL+ TDVA+RGLDI VD VINY++P S+DY+HR+GRT RAGR G+AIS+ + E E
Sbjct: 302 NILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGRKGIAISMYSSDEKES 361
Query: 365 YLQIEKLIGKKL 376
+IE LIG K
Sbjct: 362 LHEIETLIGTKF 373
>gi|187934290|ref|YP_001887690.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
gi|187722443|gb|ACD23664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
Length = 432
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 242/420 (57%), Gaps = 21/420 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L + + + A G+ P+ IQ ++IP L GKD +G AQTG+GKT AFA+P+LQ
Sbjct: 3 FKDLNIIEPIQRALTEAGYTNPTPIQEQSIPSLLNGKDFLGCAQTGTGKTAAFAIPVLQ- 61
Query: 70 LLEIAENQ------RTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
IA+NQ RT+ A +L+PTRELAIQI E F +++ V+ GGV
Sbjct: 62 --NIAQNQKKSDKPRTIKAL---ILAPTRELAIQIEENFTLYSKHTNIKNTVIFGGVSQK 116
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
QT LG+ I++ATPGRL+D L + K L +K+ VLDEADR+ + + + +I+
Sbjct: 117 PQTRILGEGVDILIATPGRLLD-LIDQKYIDLSNVKHFVLDEADRMFDMGMVRDVKKIVA 175
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P++RQ LFSATM +VK L + LK+PVK+E A ST+DT+ Q FV K K
Sbjct: 176 KLPKVRQNLLFSATMPSEVKSLVNSILKDPVKVEVAPVSSTIDTITQGVYFVTKKDKKSL 235
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LV++L + S S +VF+RT + L G + I G+ SQ+ R AL+ FK G+
Sbjct: 236 LVHLLKDESIKSLLVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGK 295
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TD+A+RG+D+ + VINYD+P + Y+HR+GRT RAG +GVAIS + E
Sbjct: 296 IRVLVATDIAARGIDVDGLSHVINYDLPDVPETYVHRIGRTGRAGNSGVAISFCDVDEKS 355
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS--------GNKRRRKG 415
IEK IGK +P E E + + + K + T + G+KRR +G
Sbjct: 356 ALKDIEKTIGKNIPVMKNVEFERIAITREPAQRKEADKKTTDANKKPKRNWYGDKRRSQG 415
>gi|239816848|ref|YP_002945758.1| DEAD/DEAH box helicase domain-containing protein [Variovorax
paradoxus S110]
gi|239803425|gb|ACS20492.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus S110]
Length = 486
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/381 (43%), Positives = 231/381 (60%), Gaps = 6/381 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G++T + IQ +AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L+ EN T PA A VL PTRELA Q+++Q + +LR V+ GG+DM Q
Sbjct: 64 RMLK-HENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSTVVFGGIDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NPV IE A T T++Q + V K L
Sbjct: 182 PKQRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARPNETASTVEQHFYSVTDDDKRRALK 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
I+ + + VF + LA L G R + G SQ +RL AL FKAGE +
Sbjct: 242 QIVKQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN-QYELEW 364
+L+CTDVA+RGLDI V V N+DIP N++DY+HR+GRT RAG +G+A+S + +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARL 361
Query: 365 YLQIEKLIGKKLPEFPAEEEE 385
IEKLI KK+ P E EE
Sbjct: 362 VADIEKLIKKKIELEPVEFEE 382
>gi|410100568|ref|ZP_11295528.1| hypothetical protein HMPREF1076_04706 [Parabacteroides goldsteinii
CL02T12C30]
gi|409215603|gb|EKN08602.1| hypothetical protein HMPREF1076_04706 [Parabacteroides goldsteinii
CL02T12C30]
Length = 428
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 240/424 (56%), Gaps = 10/424 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++L L + + +A G+ P+ IQAEAIP+ L+G DL+G AQTG+GKT AF++PI+Q
Sbjct: 2 TFEQLELIEPIQKALTKEGYTIPTPIQAEAIPYVLDGYDLLGCAQTGTGKTAAFSIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L ++ + V A +L+PTRELAIQI E F A G +R V+ GGV QT A
Sbjct: 62 NLYNERQHGK-VRGIKALILTPTRELAIQIGESFTAYGKYTGVRHTVIFGGVGQKPQTDA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +++ATPGRL+D L N SL L Y VLDEADR+L+ F + IL ++P+
Sbjct: 121 LERGVDVLIATPGRLLD-LINQGFISLKYLDYFVLDEADRMLDMGFIHDIKRILPLLPKK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM ++++L L P K+E STVD + Q FV K L ++L
Sbjct: 180 RQSLFFSATMPPEIERLAGTILHEPQKVEVTPASSTVDKIDQSVYFVEKAEKVSLLTHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S S +VFTRT +A +L A I G+ SQ+ R AL FK +LI
Sbjct: 240 KDSSLESVLVFTRTKHGADKVARVLAKANIGAEAIHGNKSQTARQRALTNFKDHTTRVLI 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P + Y+HR+GRT RAGR+GVA S + E+ + I
Sbjct: 300 ATDIAARGIDVDHLSHVINYELPNVPETYVHRIGRTGRAGRSGVAYSFCDAEEVPYLKDI 359
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGI 428
+KLIGK++P E E + V E K IK +R G D R
Sbjct: 360 QKLIGKQIPVAGGNEFETADVKAAVAEKKE----AIKQESKRRNMFGSKRDGSFWR---- 411
Query: 429 NKKK 432
NKK+
Sbjct: 412 NKKR 415
>gi|332662156|ref|YP_004444944.1| DEAD/DEAH box helicase [Haliscomenobacter hydrossis DSM 1100]
gi|332330970|gb|AEE48071.1| DEAD/DEAH box helicase domain protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 380
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/376 (42%), Positives = 226/376 (60%), Gaps = 1/376 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL L D ++ A E+ G+ P+ IQ +AIP LE KDL+G AQTG+GKT AFA+PILQ
Sbjct: 2 TFKELNLIDPILHALESEGYTIPTPIQQKAIPVLLERKDLLGCAQTGTGKTAAFAIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + A +L+PTRELAIQISE F A G L+ AV+ GGV+ +Q A
Sbjct: 62 LLYQDKGLSKGPRQLKALILTPTRELAIQISESFGAYGRNCGLKHAVIFGGVNQSKQVEA 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ I+VATPGRL+D L N + SL + VLDEADR+L+ F + I+ +P+
Sbjct: 122 IRGGLDILVATPGRLLD-LMNQQLLSLQHINTFVLDEADRMLDMGFVHDVKRIITRLPQR 180
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM +++KL L NPVK+E + ST + ++Q FV + K L+ +L
Sbjct: 181 RQSLFFSATMPPEIQKLANTILSNPVKVEVSPISSTTEMVEQMVYFVEKRDKRNLLIQLL 240
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VFTRT + + G R+ I G+ SQ+ R ALN FK G+ +L+
Sbjct: 241 RSPNVKSALVFTRTKHGADKINRDIVKAGIRSNAIHGNKSQNARQSALNGFKEGKLRVLV 300
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ ++ VINYD+P + Y+HR+GRT RAG +G+A+S + E + I
Sbjct: 301 ATDIAARGIDVDNLSHVINYDLPNIPETYVHRIGRTGRAGASGIALSFCDSEERAYLRDI 360
Query: 369 EKLIGKKLPEFPAEEE 384
KLI K +P E
Sbjct: 361 SKLIAKNIPSVNYHPE 376
>gi|330817865|ref|YP_004361570.1| ATP-dependent RNA helicase [Burkholderia gladioli BSR3]
gi|327370258|gb|AEA61614.1| Putative ATP-dependent RNA helicase 2 [Burkholderia gladioli BSR3]
Length = 485
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 227/375 (60%), Gaps = 5/375 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A +LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NSSASPARHPVRALILTPTRELADQVAANVHAYAKHTALRSAVVFGGVDMNSQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L NP IE A +T + Q + K +V
Sbjct: 190 PKQRQTLLFSATFSPEIKKLASTYLSNPQTIEVARSNATATNVTQVVYEIAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA L G A I G SQ++R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQLERDGVVATAIHGDRSQNERMQALDAFKRGEVE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKLPEFP 380
IEKLI + LP P
Sbjct: 370 ADIEKLIKRDLPLQP 384
>gi|423343393|ref|ZP_17321106.1| hypothetical protein HMPREF1077_02536 [Parabacteroides johnsonii
CL02T12C29]
gi|409215468|gb|EKN08468.1| hypothetical protein HMPREF1077_02536 [Parabacteroides johnsonii
CL02T12C29]
Length = 425
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 175/429 (40%), Positives = 248/429 (57%), Gaps = 12/429 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++L L + + +A + + TP+ IQAEAIP L+G DL+G AQTG+GKT AF++PI+Q
Sbjct: 8 TFEQLELIEPIRKALKKEKYTTPTPIQAEAIPLVLDGSDLLGCAQTGTGKTAAFSIPIIQ 67
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ E ++R P A VL+PTRELAIQI E F A G ++ V+ GGV QT A
Sbjct: 68 KIEEQISSRRK-PGIKALVLTPTRELAIQIGESFTAYGCYTHVKHTVIFGGVGQKPQTDA 126
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L + +++ATPGRL+D L+ +GF L TL+Y VLDEADR+L+ F + IL ++P+
Sbjct: 127 LERGVDVLIATPGRLLDLLS--QGFIRLDTLEYFVLDEADRMLDMGFIHDIKRILPLLPK 184
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQ+ FSATM ++++L L P K+E STVDT+ Q FV K L +
Sbjct: 185 KRQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSSTVDTIDQSVYFVEKVEKINLLKNL 244
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S S +VFTRT +A +L G A I G Q+ R AL+ FK +L
Sbjct: 245 LEDRSLESVLVFTRTKYGADKVARVLNKSGIGAEAIHGDKGQNARQRALSSFKDHTLRVL 304
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TD+ASRG+D+ + VINYD+P + Y+HR+GRT RAGR+G+A S + E+ +
Sbjct: 305 IATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKD 364
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFG 427
I+KLIGK +P E + E V E K+ +K+ +R G D R
Sbjct: 365 IQKLIGKDVPVAGGHMFETAEVKEAVAEKKK----AMKEESKRRNMFGNKRDGSFWR--- 417
Query: 428 INKKKLSKR 436
NKK+ + +
Sbjct: 418 -NKKRTANK 425
>gi|453088320|gb|EMF16360.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 507
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 176/431 (40%), Positives = 248/431 (57%), Gaps = 35/431 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LG+ L+ A +N+ P++IQ IP L GKD IG ++TGSGKT AFALPILQ
Sbjct: 75 TFKDLGVSPWLIHALKNLSITNPTRIQKSTIPEILAGKDCIGGSRTGSGKTIAFALPILQ 134
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ + +A +L+PTRELA+QI EQ +A+G ++ ++ GG +M +Q +
Sbjct: 135 ------QWAKEPSGIYALILTPTRELALQIYEQIQAIGGNQGIKSVLVTGGAEMRKQAIE 188
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKYLVLDEADRLLND-------DFEKSL 178
L K+PHIV+ATPGRL DH+ N+ + L +K++V DEADRLL D E+ L
Sbjct: 189 LEKKPHIVIATPGRLADHVLNSGEDTIRGLKKVKFVVFDEADRLLQSGKGSMLGDVERCL 248
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN----PVKIEA-ASKYSTVDTLKQQYR 233
D + + RQT LF+AT+T +V+ L+ + +N P E + TL Q Y+
Sbjct: 249 DAVPSAA--KRQTLLFTATVTPEVRALKESPRENGRPPPFVSEVDIDSLAIPSTLTQTYQ 306
Query: 234 FVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
V +K+ YL +IL A+ +T++FT LL MLR+L R + ++
Sbjct: 307 LVNVLHKEKYL-HILLSTPANIQKTTIIFTNRTTTANLLEYMLRSLEHRITALHSALTHE 365
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
R+ L +F+AG IL+ TDVA RGLDIP V +VINYD+P N DYIHRVGRTARAGR
Sbjct: 366 DRVNNLARFRAGAARILVATDVAGRGLDIPDVGLVINYDLPRNPDDYIHRVGRTARAGRV 425
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFP-----AEEEEVLLLLERVTEAKRISQMTI- 404
GVAISLV Q +++ IE +GK + + E + L V + KR + + I
Sbjct: 426 GVAISLVGQRDVDLVKAIEARVGKAMVAYEETGVNVETRVIREALNVVGDKKREAMLNIE 485
Query: 405 --KDSGNKRRR 413
+D KRRR
Sbjct: 486 EGRDVKGKRRR 496
>gi|345867959|ref|ZP_08819956.1| ATP-dependent RNA helicase rhlE [Bizionia argentinensis JUB59]
gi|344047610|gb|EGV43237.1| ATP-dependent RNA helicase rhlE [Bizionia argentinensis JUB59]
Length = 427
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 227/369 (61%), Gaps = 3/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LGL D L++A G++ PS IQ +AIP LEG+D++ AQTG+GKT F LP+LQ
Sbjct: 2 TFKQLGLSDALLKAVSKQGYEKPSPIQQKAIPPVLEGRDVLASAQTGTGKTAGFTLPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+L E R P A +L+PTRELA Q+ E LR V+ GGV+ Q A
Sbjct: 62 -ILSQTETSRQRP-IRALILTPTRELAAQVHENVRQYSEFTDLRSLVIFGGVNQKPQVAA 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + ++VATPGRL+D L N L ++ LVLDEADR+L+ F + ++ I+ ++P
Sbjct: 120 LNRGVDVLVATPGRLLD-LQNQGAICLRKIEILVLDEADRMLDMGFLRDIERIMALMPAK 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT +K +K+L L PV +EA + STVD + Q+ V K ++ ++
Sbjct: 179 RQNLLFSATFSKDIKRLASGILNKPVLVEATPENSTVDAITQKVYRVAKGKKTGLIIKLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+E + + +VF RT L + + G A I G+ SQ R AL FK+G+ ++L+
Sbjct: 239 SEGNWNQVLVFARTKHGANKLCKSMISSGITAAAIHGNKSQGARTKALAGFKSGQISVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDIP + VIN+++P S+DY+HR+GRT RAG +G AISLV+ E + I
Sbjct: 299 ATDIAARGLDIPLLPHVINFELPNISEDYVHRIGRTGRAGASGEAISLVSADETTFLRDI 358
Query: 369 EKLIGKKLP 377
EKL+G+K+P
Sbjct: 359 EKLVGEKIP 367
>gi|326315975|ref|YP_004233647.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372811|gb|ADX45080.1| DEAD/DEAH box helicase domain protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 491
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 227/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G+ + + IQAEAIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYTSMTPIQAEAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL+ EN T PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NPV IE A T T++Q++ V K +
Sbjct: 182 PKTRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARPNETASTVEQRFYSVNDDDKRRAIH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L VF + L+ L G +A + G SQ +RL AL+ FK GE +
Sbjct: 242 HVLRTRGVKQAFVFVNSKLGCARLSRTLEREGLKAAALHGDKSQDERLKALDAFKRGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++LV+ +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSSSDARLV 361
Query: 366 LQIEKLIGKKL 376
IEKL KK+
Sbjct: 362 ADIEKLTKKKI 372
>gi|170046083|ref|XP_001850610.1| ATP-dependent RNA helicase DBP8 [Culex quinquefasciatus]
gi|167868981|gb|EDS32364.1| ATP-dependent RNA helicase DBP8 [Culex quinquefasciatus]
Length = 516
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 249/423 (58%), Gaps = 21/423 (4%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
MA++ + K F +LGL+ + + E +G + P+ IQ IP L+G+D IG A+TGSGKT
Sbjct: 1 MAQKTDQK-FADLGLKPWITKQLEKLGLRRPTPIQQACIPRILDGQDCIGAAKTGSGKTF 59
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPILQ L E + FA +L+PT ELA QI+EQF G + ++ V+ GG
Sbjct: 60 AFALPILQRLSEEPTSN------FALILTPTHELAYQIAEQFSVAGQPMGVKVCVVTGGT 113
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D + + L RPHIVVA PGRL HLT +S L++LV+DEADR+L+ F++ L+
Sbjct: 114 DQLLEAQRLQARPHIVVAMPGRLAAHLTGCNTYSFRALQFLVVDEADRVLSGSFDEDLEA 173
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPV-----KIEAASKYSTVDTLKQQYRFV 235
I +P RQ FSAT+ K+ R P+ + S+ +TV+TL Q+Y
Sbjct: 174 IKRFLPEKRQNLFFSATL----KEFMRESSVFPIAGGAFEWSEESEVATVETLDQRYILC 229
Query: 236 PAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
+D L+ L E ++ ++FT + ++L+L L +G + + G + Q +
Sbjct: 230 ADYDRDMVLIETLRKFKEEKEDANVIIFTNSKKDCQVLSLTLNKIGFDNVCLHGFLRQKE 289
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R+ ALN+FK+ ILI TDVASRGLDIP+V +V+N+ +P +YIHRVGRTARAGR G
Sbjct: 290 RVAALNRFKSKHVRILIATDVASRGLDIPNVQLVLNHRLPKVPNEYIHRVGRTARAGRKG 349
Query: 352 VAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
+AIS+ +LE+ +IE LI KL E P ++ V + +V+ A+R ++M + +
Sbjct: 350 LAISIFRFPRDLEFLGEIEALINTKLTEHPVDQRLVERIFMQVSVARREAEMNLDNKDFD 409
Query: 411 RRR 413
RR
Sbjct: 410 ERR 412
>gi|149371676|ref|ZP_01891092.1| RNA helicase [unidentified eubacterium SCB49]
gi|149355303|gb|EDM43863.1| RNA helicase [unidentified eubacterium SCB49]
Length = 419
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 234/368 (63%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LGL D L++A G+ TPS IQA+AIP LEGKD++ AQTG+GKT F+LP+L
Sbjct: 2 TFKDLGLSDPLLKAISKKGYTTPSPIQAKAIPKILEGKDVLASAQTGTGKTAGFSLPMLH 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ + QR P A +++PTRELA QI ++ + + +R V+ GGV+ Q A
Sbjct: 62 IITK-QPFQRHRPVK-ALIVTPTRELAAQILKEIKDYSAFTDVRSTVIFGGVNANPQIRA 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL+D L + F++ +++LVLDEADR+L+ F + +++IL ++P
Sbjct: 120 LKQGTDILVATPGRLLD-LHSQGVFNMKKVEFLVLDEADRMLDMGFVRDINKILAILPAK 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT +K++KKL ++ L NPV +EA + ST + +KQ K ++ ++
Sbjct: 179 RQNLLFSATFSKEIKKLAQSFLTNPVLVEAQRENSTAEKVKQTIYKTNKSAKTNLVIKLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
TE + ++FTRT LA L ++ I G+ SQ R AL FK G +L+
Sbjct: 239 TEGNWEQVLIFTRTKHGANRLAEKLGKADVKSAAIHGNKSQGARTKALAGFKDGSIRVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDIP + VINY++P +DY+HR+GRTARAG +G AIS+V+ E E+ I
Sbjct: 299 ATDIAARGLDIPLLPHVINYELPNIPEDYVHRIGRTARAGASGDAISIVSVDEFEYVKGI 358
Query: 369 EKLIGKKL 376
EKL+G+KL
Sbjct: 359 EKLLGEKL 366
>gi|323485816|ref|ZP_08091151.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
gi|323400804|gb|EGA93167.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
Length = 458
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 254/439 (57%), Gaps = 15/439 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L L L++A E G+ +PS IQ +AIPH L G+D++G AQTG+GKT AFALPI+Q
Sbjct: 15 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVLAGRDVLGCAQTGTGKTAAFALPIIQN 74
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L++ +E + + + +L+PTR+LA+QI+E F+ GS S+RCAV+ GGV Q L
Sbjct: 75 LMKPSEKKYSKRVIRSLILTPTRKLALQIAENFKEYGSRTSVRCAVIFGGVSANPQIEEL 134
Query: 130 GKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ I+VATPGRL D + +GF L ++ VLDEADR+L+ F + +I++++P
Sbjct: 135 RRGIDILVATPGRLNDLVG--QGFVDLAYVEIFVLDEADRMLDMGFIHDVKKIISLLPVR 192
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT LFSATM +++ L L NP ++E STVD + +V + K LVY+L
Sbjct: 193 KQTLLFSATMPAEIQALTDKLLHNPARVEVTPVSSTVDIIDASLYYVDKENKRSLLVYLL 252
Query: 249 TEVSASSTMVFTRT-CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ST+VFTRT A R+ +++N A I G SQ R AL+ FK+GE +L
Sbjct: 253 NHEDITSTLVFTRTKHGADRVAKFLVKNRIS-AAAIHGDKSQGARQTALSHFKSGEIQVL 311
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RG+DI + VIN+D+P + YIHR+GRT RAG G AIS + E +
Sbjct: 312 VATDIAARGIDIEELSCVINFDLPNIPETYIHRIGRTGRAGLDGRAISFSDIEEKAYVKD 371
Query: 368 IEKLIGKKLP----------EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD 417
IEKL GK +P F +E RVT + T SG++ +++
Sbjct: 372 IEKLTGKAIPVVDTHPYPMAVFVVPPKETKPRPSRVTAKSSVKSQTKAQSGSQTKKRANT 431
Query: 418 EDDDIGRQFGINKKKLSKR 436
+ + +KKL ++
Sbjct: 432 QSKTPAGKLVNPEKKLRRK 450
>gi|123468442|ref|XP_001317439.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121900173|gb|EAY05216.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 416
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 239/394 (60%), Gaps = 8/394 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LGL +V+AC+++GWK P IQ + IP A+E KD+ G A+TGSGKTGA+ LPI
Sbjct: 7 TFSDLGLCQPMVDACKSLGWKYPMPIQIKTIPPAIEKKDICGTAETGSGKTGAYMLPIFH 66
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ E +FFA V +PTRELA QI +G I +R ++GGVD Q A
Sbjct: 67 HMWENPH------SFFALVFAPTRELATQIDHVTRDIGKDIKVRVCTIIGGVDEDSQVKA 120
Query: 129 LGKRPHIVVATPGRLMDHL-TNTKGFSLGTLKYLVLDEADRLLND-DFEKSLDEILNVIP 186
L +PH+VVATPGRL + N K L ++ LV DEAD +L + F+ + IL+ +
Sbjct: 121 LKAQPHVVVATPGRLARLIRNNPKVIPLNKVECLVFDEADNMLREPSFQTDIQLILSKLN 180
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
QTYLFSATM +++++L + + +PV++ S + TL + K+ LV
Sbjct: 181 STHQTYLFSATMPEEIEQLAKQTMSDPVRLSLTSVNTVARTLTEHLVISETGKKEATLVA 240
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ + T++F +C +++ +L NL R I G + Q +R+ A+++FK G+ +
Sbjct: 241 LMNQYPDKQTIIFVGSCKTATIISTLLSNLNFRTIVYHGQLPQRERINAIDRFKNGDYRV 300
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ T+V SRGLD+P VD+VINY++P ++YIHRVGR RA R+GVA++++ E+ Y+
Sbjct: 301 LVATNVGSRGLDVPHVDLVINYELPEEHEEYIHRVGRAGRAERSGVAVTIITANEVVGYI 360
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 400
++E + KK+P+ E++ + E+V AKR++
Sbjct: 361 RLENFLKKKIPKKDIPLEKIEEVTEKVELAKRVA 394
>gi|67537466|ref|XP_662507.1| hypothetical protein AN4903.2 [Aspergillus nidulans FGSC A4]
gi|74657196|sp|Q5B3H7.1|DBP8_EMENI RecName: Full=ATP-dependent RNA helicase dbp8
gi|40741791|gb|EAA60981.1| hypothetical protein AN4903.2 [Aspergillus nidulans FGSC A4]
gi|259482230|tpe|CBF76513.1| TPA: ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B3H7] [Aspergillus
nidulans FGSC A4]
Length = 525
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 178/437 (40%), Positives = 260/437 (59%), Gaps = 38/437 (8%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E +FK L + LV + + + P+ IQ IP L+G+D IG ++TGSGKT AF++P
Sbjct: 93 EENSFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVP 152
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ + AE+ FA +L+PTRELA+QI EQ +A+ + S++ ++ GG DM Q
Sbjct: 153 ILQ---KWAEDPF---GIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQ 206
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGF----SLGTLKYLVLDEADRLLNDDFEKSLDEI 181
+ L RPH+VVATPGRL DH+ NT G L ++ +VLDEADRLL+ L ++
Sbjct: 207 AIELAGRPHVVVATPGRLADHI-NTSGTDTVAGLKRVRMVVLDEADRLLSPGPGSMLPDV 265
Query: 182 LNVI-----PRMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQ 230
+ P RQT LF+AT+T +V+ L+ + K P+ +I +K + TL+
Sbjct: 266 ETCLSFLPGPSQRQTLLFTATLTPEVRALKSMPQTPGKPPIFVTEISTEAKDTVPPTLRT 325
Query: 231 QYRFVPAKYKDCYLVYILTEVS--ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMS 288
Y VP +++ +L +L+ S S +VFT T + LL +LR+LG R + +
Sbjct: 326 TYVQVPLTHREAFLHVLLSTESNITKSAIVFTNTTKSADLLERLLRSLGHRVTSLHSLLP 385
Query: 289 QSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAG 348
QS+R L +F+A +L+ TDVASRGLDIPSV +V+N+++P N DY+HRVGRTARAG
Sbjct: 386 QSERNSNLARFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHRVGRTARAG 445
Query: 349 RTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKRIS 400
RTG A++LV Q +++ L IE+ IG+K+ E+ EEE V L LL+ V AKR +
Sbjct: 446 RTGEAVTLVGQRDVQLVLAIEERIGRKMVEY--EEEGVNLEARVAKGSLLKEVGAAKREA 503
Query: 401 QMTIKDS----GNKRRR 413
+ I + G KR +
Sbjct: 504 MVEIDEGRDVLGRKRNK 520
>gi|120609836|ref|YP_969514.1| DEAD/DEAH box helicase [Acidovorax citrulli AAC00-1]
gi|120588300|gb|ABM31740.1| DEAD/DEAH box helicase domain protein [Acidovorax citrulli AAC00-1]
Length = 489
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 227/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G+ + + IQAEAIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYTSMTPIQAEAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL+ EN T PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NPV IE A T T++Q++ V K +
Sbjct: 182 PKTRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARPNETASTVEQRFYSVNDDDKRRAIH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L VF + L+ L G +A + G SQ +RL AL+ FK GE +
Sbjct: 242 HVLRTRGVKQAFVFVNSKLGCARLSRTLEREGLKAAALHGDKSQDERLKALDAFKRGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++LV+ +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSSSDARLV 361
Query: 366 LQIEKLIGKKL 376
IEKL KK+
Sbjct: 362 ADIEKLTKKKI 372
>gi|377820266|ref|YP_004976637.1| DEAD/DEAH box helicase [Burkholderia sp. YI23]
gi|357935101|gb|AET88660.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. YI23]
Length = 496
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 178/438 (40%), Positives = 247/438 (56%), Gaps = 21/438 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 18 TFDQFGLAADILKAVRESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 77
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ + LR V+ GGVDM Q
Sbjct: 78 RLLPSA-NTSASPARHPVRALMLTPTRELADQVAANVQTYSKHTPLRSTVVFGGVDMNPQ 136
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ AL + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 137 SDALRRGVEILIATPGRLLDHVQQ-KTVNLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 195
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST ++Q V K +
Sbjct: 196 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVRQIVFEVHESDKSGAVA 255
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E +VF + LA +L G A I G SQS+R+ AL+ FK GE
Sbjct: 256 QLIRERELKQVIVFCNSKIGASRLARVLEKDGIVATAIHGDRSQSERMQALDAFKRGEIE 315
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 316 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSANERKQL 375
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLER--VTEAKRISQ-----------MTIKDSGNKRR 412
IEKLI + L E EV + R T A R + +D RR
Sbjct: 376 ADIEKLIKRPL---EVEPLEVTMRARRDGATSAPRRDERFGRSERAEHRHGSRDEAGSRR 432
Query: 413 RKGGDEDDDIGRQFGINK 430
R D GRQ I++
Sbjct: 433 RTASTHDRPRGRQQPIDE 450
>gi|409099575|ref|ZP_11219599.1| DEAD/DEAH box helicase [Pedobacter agri PB92]
Length = 433
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 225/368 (61%), Gaps = 1/368 (0%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L + +++A E G+ P+ IQ ++IP L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FKELNLIEPILKALEKEGYTQPTPIQEQSIPTILKGKDLLGCAQTGTGKTAAFAIPMLQL 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E N + A VL+PTRELAIQI E F+A GS ++LR V+ GGV+ Q AL
Sbjct: 63 LHEKHINTKATKNIKALVLTPTRELAIQIEESFKAYGSNLNLRHLVIFGGVNQHSQVEAL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K I+VATPGRL+D L N +L T++ VLDEADR+L+ F + ++ +P R
Sbjct: 123 RKGVDILVATPGRLLD-LMNQGFITLNTIELFVLDEADRMLDMGFIHDVKRVVAKLPAKR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT FSATM +++KL L +P K+E ST +T+ Q FV K L+++L
Sbjct: 182 QTLFFSATMPDEIQKLANTILSSPTKVEVTPISSTAETIVQSVYFVDKPDKKKLLIHLLE 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ + + +VFTRT + L + G +A I G+ SQ+ R AL FK + +L+
Sbjct: 242 DKNIQTALVFTRTKHGADRIVKDLGHSGIKAAAIHGNKSQNARQRALTDFKDRKIRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + V N+++P + Y+HR+GRT RAG G+AIS + E E+ L I+
Sbjct: 302 TDIAARGIDIDQLSHVFNFELPNIPESYVHRIGRTGRAGANGIAISFCDAEENEYLLDIQ 361
Query: 370 KLIGKKLP 377
KLI LP
Sbjct: 362 KLIKITLP 369
>gi|338535344|ref|YP_004668678.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
gi|337261440|gb|AEI67600.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
Length = 516
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 226/370 (61%), Gaps = 4/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL L D L+ A + G+ TP+ IQ +AIPHAL G+D++G+AQTG+GKT AFALPILQ
Sbjct: 2 TFDELQLHDTLLRAVKAEGYTTPTPIQQKAIPHALTGRDVLGVAQTGTGKTAAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L A P VL+PTRELA Q+ + F+ G G+ LR AV+ GGV Q A
Sbjct: 62 RLSAKAPAGGARP-VRCLVLTPTRELAGQVGDSFQTYGKGLPLRHAVIFGGVGQNPQVQA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++VATPGRL+D + +GF SL +L+ VLDEADR+L+ F + ++ +P
Sbjct: 121 LRNGVDVLVATPGRLLDLME--QGFVSLRSLEVFVLDEADRMLDMGFIHDVRRVIKALPP 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSAT+ + L R+ L +P+++E + ST +T+ QQ FV + K L ++
Sbjct: 179 KRQTLFFSATLPPDIVDLARSILTDPIRVEVSPASSTAETVSQQVYFVEREQKRGLLTHL 238
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + S +VFTRT +A L G + I G+ SQ+ R AL++F++G +L
Sbjct: 239 LKEGNISRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVL 298
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RG+DI + V+NYD+P + Y+HR+GRT RAG +G A+S + E +
Sbjct: 299 VATDIAARGIDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRD 358
Query: 368 IEKLIGKKLP 377
IE+ I + +P
Sbjct: 359 IERTIRRNVP 368
>gi|337278667|ref|YP_004618138.1| ATP-dependent RNA helicase [Ramlibacter tataouinensis TTB310]
gi|334729743|gb|AEG92119.1| Candidate ATP-dependent RNA helicase [Ramlibacter tataouinensis
TTB310]
Length = 486
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 230/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G++T + IQA+AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 11 SFSNLSLAEPLARAVAEMGYETMTPIQAQAIPVVLTGRDVMGAAQTGTGKTAAFSLPLLQ 70
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL+ EN T PA A VL PTRELA Q+++Q + +LR AV+ GG+DM Q
Sbjct: 71 RLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSAVVFGGMDMKPQ 129
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L + ++VATPGRL+DH+ K LG ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 130 TLELKRGVEVLVATPGRLLDHI-EAKNAVLGQVEYVVLDEADRMLDIGFLPDLQRILSYL 188
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + LK+PV IE A T T++Q + V K L
Sbjct: 189 PKQRTTLLFSATFSPEIKRLANSYLKDPVTIEVARPNETASTVEQHFYSVTDDDKRRALK 248
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
I+ + + VF + LA L G + + G SQ +RL AL FKAGE +
Sbjct: 249 QIVRQRGITQAFVFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALAAFKAGEVD 308
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++ V+ +
Sbjct: 309 LLVATDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTFVSGSDGRLV 368
Query: 366 LQIEKLIGKKL 376
+EKL+ KK+
Sbjct: 369 ADLEKLLKKKV 379
>gi|186476836|ref|YP_001858306.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
phymatum STM815]
gi|184193295|gb|ACC71260.1| DEAD/DEAH box helicase domain protein [Burkholderia phymatum
STM815]
Length = 482
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 228/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLHADILKAIAEQGYTTPTPIQAKAIPVVLGGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL +A N PA A +L+PTRELA Q++ ++ +LR AV+ GGVDM Q
Sbjct: 72 RLLPLA-NTSASPARHPVRALILTPTRELADQVAANVQSYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PTERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E S +VF + LA L G A I G SQS+R+ AL+ FK GE
Sbjct: 250 QLIRERSLKQVIVFCNSKIGASRLARQLERDGVVATAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|293603664|ref|ZP_06686084.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
gi|292817932|gb|EFF76993.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
Length = 493
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 161/381 (42%), Positives = 234/381 (61%), Gaps = 9/381 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL L+++ G+ P+ IQA+AIP +EG+D++G AQTG+GKT AF +PIL
Sbjct: 18 TFADFGLHPLLLQSIAETGYTVPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTVPILH 77
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ +A N PA A +L+PTRELA Q+ E + LR AV+ GGVD+ Q
Sbjct: 78 RLMPLA-NASASPARHPVRALILTPTRELADQVFESVKRYSKQTPLRSAVVFGGVDIGPQ 136
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
AL + I+VATPGRL+DH+ K +L + LVLDEADR+L+ F L+ I+ ++
Sbjct: 137 KEALRRGCEILVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLL 195
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ LFSAT + +++KL R+ L PV+IE A++ +T T+ Q + + K +V
Sbjct: 196 PAQRQGLLFSATFSNEIRKLGRSYLNQPVEIEVAARNATATTITQIAYKMSSDAKRAAVV 255
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+++ +VF+ T T LA L G +A I G +Q+ R+ AL FKAG+
Sbjct: 256 HLVKSRGLKQVIVFSNTKIGTARLARELERDGVKAESIHGDKTQADRMKALEAFKAGDLE 315
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L E +
Sbjct: 316 VLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTPDEERFL 375
Query: 366 LQIEKLIGKKLP----EFPAE 382
L IEKLI +++P + PA+
Sbjct: 376 LDIEKLIKREVPRGTLDLPAD 396
>gi|167375453|ref|XP_001733648.1| ATP-dependent rRNA helicase rrp3 [Entamoeba dispar SAW760]
gi|165905151|gb|EDR30227.1| ATP-dependent rRNA helicase rrp3, putative [Entamoeba dispar
SAW760]
Length = 300
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/295 (50%), Positives = 203/295 (68%), Gaps = 8/295 (2%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFK+LGL E+++ E +G+K P+KIQ +IP AL+ KD+IG+AQTGSGKT +F LP++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTKIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMI 68
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCAVLVGGVDMMQQT 126
Q LL + E R AF+ ++ PTRELA Q+ E + +G + L +LVGG+D+M+Q+
Sbjct: 69 QHLLNVKEKNR---AFYCIIIEPTRELAAQVVEVLDEIGKALPGLMSCLLVGGMDVMKQS 125
Query: 127 LALGKRPHIVV-ATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
+ L KRPH+++ TPGR++ H+ NTKG S+ +K+LV+DEAD+LL DF +D ++
Sbjct: 126 VQLAKRPHVILLGTPGRIVYHIKNTKGVEESIQKVKFLVIDEADKLLEMDFANEIDYLIE 185
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASKYSTVDTLKQQYRFVPAKYKDC 242
+P R T LFSATM+ KV+KLQRA L +PVKI E KY TVDTL+Q+Y F+P KY+D
Sbjct: 186 KLPSQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQEYCFIPFKYRDG 245
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
YL+ IL E S ++FT C L +MLR LG AIP+ G MSQ KRL AL
Sbjct: 246 YLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPLHGKMSQQKRLIALE 300
>gi|398811913|ref|ZP_10570698.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
gi|398079456|gb|EJL70309.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
Length = 487
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 166/381 (43%), Positives = 231/381 (60%), Gaps = 6/381 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G++T + IQ +AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLMLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L+ EN T PA A VL PTRELA Q+++Q + +LR V+ GG+DM Q
Sbjct: 64 RMLK-HENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSTVVFGGIDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
TL L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NPV IE A T T++Q + V K L
Sbjct: 182 PKQRTTLLFSATFSPEIKRLASSYLQNPVTIEVARPNETASTVEQHFYSVGDDDKRRALK 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
I+ + + VF + LA L G R + G SQ +RL AL FKAGE +
Sbjct: 242 QIVKQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALAAFKAGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN-QYELEW 364
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A+S + +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARL 361
Query: 365 YLQIEKLIGKKLPEFPAEEEE 385
IEKLI KK+ P E EE
Sbjct: 362 VADIEKLIKKKIELEPVEFEE 382
>gi|420246760|ref|ZP_14750191.1| DNA/RNA helicase, superfamily II, partial [Burkholderia sp. BT03]
gi|398073382|gb|EJL64557.1| DNA/RNA helicase, superfamily II, partial [Burkholderia sp. BT03]
Length = 411
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 227/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQAEAIP L G+D++G AQTG+GKT F+LPI+Q
Sbjct: 12 TFDQFGLHADILKAIAEQGYTTPTPIQAEAIPVVLGGRDVMGAAQTGTGKTAGFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL +A + PA A +L+PTRELA Q++ +A SLR AV+ GGVDM Q
Sbjct: 72 RLLPLASTSAS-PARHPVRALILTPTRELADQVAANVQAYAKHTSLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PAERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + +VF + LA L G A I G +QS+R+ AL+ FK GE
Sbjct: 250 KLIRDRGLKQVIVFCNSKIGASRLARQLERDGVVATAIHGDRTQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + +E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSPHERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|225681783|gb|EEH20067.1| ATP-dependent RNA helicase dbp8 [Paracoccidioides brasiliensis
Pb03]
Length = 546
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 246/415 (59%), Gaps = 34/415 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + K P+ IQ IP L+G+D IG ++TGSGKT AFA PILQ
Sbjct: 117 SFATLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPILQ 176
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E FA VL+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q +A
Sbjct: 177 KWSEDPF------GIFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIA 230
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLND---DFEKSLDEI 181
L +RPH+V+ATPGRL DH+ N+ G L +++VLDEADRLL L+
Sbjct: 231 LSQRPHVVIATPGRLADHI-NSSGRDTICGLNRARFVVLDEADRLLESGPGSMLADLETC 289
Query: 182 LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYR 233
L+ +P RQT LF+AT+T +V+ L+ R K P+ +I ++ + TLKQ Y
Sbjct: 290 LSALPPSTARQTLLFTATVTPEVRALKSMPRPASKPPIFVTEISTENQATIPRTLKQSYL 349
Query: 234 FVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +++ +L +L+ SS ++F LL MLR LG RA + + QS+
Sbjct: 350 LVPLTHREAFLHVLLSTDGNSSKAAIIFCNHTKTADLLERMLRRLGHRATSLHSLLPQSE 409
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R L++F+A IL+ TDVA+RGLDIPSV +VIN+ +P N DY+HRVGRTARAGR G
Sbjct: 410 RTANLSRFRASAARILVATDVAARGLDIPSVSLVINFGVPRNPDDYVHRVGRTARAGREG 469
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
A++LV Q +++ L IE +G+K+ E+ +EE V + +L+ V EAKR
Sbjct: 470 EAVTLVGQRDVQLVLAIEDRVGRKMEEW--KEEGVSIEGRIVRGGILKEVGEAKR 522
>gi|229828479|ref|ZP_04454548.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
gi|229793073|gb|EEP29187.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
Length = 538
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 227/370 (61%), Gaps = 6/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F E GL+ +L+ A G++ P+ +Q E+IP LEG+D+IG AQTG+GKT AFALP+L
Sbjct: 64 FSEFGLKKDLLSAIRKAGYEEPTPVQEESIPVILEGRDMIGCAQTGTGKTAAFALPVLHK 123
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + P A VL+PTRELAIQI + F+ G + LR L GG Q AL
Sbjct: 124 LTLLKR-----PRVRALVLTPTRELAIQIFDNFKKYGRYLHLRTVCLYGGAKRGPQIGAL 178
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I+VATPGRL+D + L +++ LVLDEADR+L+ F + I+ P R
Sbjct: 179 RRGADILVATPGRLLDFMGQDL-VDLSSVEILVLDEADRMLDMGFLPDVSRIVESTPSKR 237
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT +FSATM K+V++L LK+PV+++ + DT++Q+ F + K + +LT
Sbjct: 238 QTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFSSREDKREIIASLLT 297
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ + S +VFTRT L+ L+ G ++ I G +Q +R ALN+FK+G+ +++
Sbjct: 298 DEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRVMVA 357
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVA+RGLDIP + V NYD+P + YIHR+GRT RAG +G+AI+L + EL+ ++E
Sbjct: 358 TDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRTGRAGESGIAITLCCEAELDALREVE 417
Query: 370 KLIGKKLPEF 379
+L+ K +PE
Sbjct: 418 ELLEKPIPEL 427
>gi|329906289|ref|ZP_08274385.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327547309|gb|EGF32148.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 504
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 164/377 (43%), Positives = 227/377 (60%), Gaps = 8/377 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++ GL E++ A + G+ P+ IQA AIP L+G+D++G AQTG+GKT F+LPI+Q
Sbjct: 18 FEDFGLSAEILRALADQGYDHPTPIQAAAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQL 77
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LL A N + PA A +L+PTRELA Q++E +A LR V+ GG+DM QT
Sbjct: 78 LLANASNSAS-PARHPVRALILTPTRELADQVAENVKAYCRHTPLRSTVVFGGMDMAPQT 136
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL IV+ATPGRL+DH+ K +L + LV+DEADR+L+ F L I+N++P
Sbjct: 137 AALRAGVEIVIATPGRLLDHVQQ-KTLNLSQTQILVMDEADRMLDMGFLPDLQRIINLLP 195
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQ-YRFVPAKYKDCYLV 245
+ RQ +FSAT + ++KKL + L NPV IE A T D + Q Y+ K +
Sbjct: 196 KKRQNLMFSATFSGEIKKLASSFLDNPVTIEVARSNQTADRVTQVVYKVDSDDAKRDIVA 255
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+++ +VF+ T LA L G +A I G +QS+R+ AL FK GE +
Sbjct: 256 HLIRGRQLKQVLVFSNTKIGASRLARELEKGGVKASAIHGDKTQSERMAALEAFKGGEID 315
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLDI + VINYD+P N++DY+HR+GRT RAG +G AISL +
Sbjct: 316 VLVATDVAARGLDISDLPCVINYDLPYNAEDYVHRIGRTGRAGASGDAISLFTTKDERLL 375
Query: 366 LQIEKLIGKKLPEFPAE 382
L IEKLI K PAE
Sbjct: 376 LDIEKLINHKF--VPAE 390
>gi|226289015|gb|EEH44527.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides brasiliensis
Pb18]
Length = 546
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 246/415 (59%), Gaps = 34/415 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + K P+ IQ IP L+G+D IG ++TGSGKT AFA PILQ
Sbjct: 117 SFATLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPILQ 176
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E FA VL+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q +A
Sbjct: 177 KWSEDPF------GIFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIA 230
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLND---DFEKSLDEI 181
L +RPH+V+ATPGRL DH+ N+ G L +++VLDEADRLL L+
Sbjct: 231 LSQRPHVVIATPGRLADHI-NSSGRDTICGLNRARFVVLDEADRLLESGPGSMLADLETC 289
Query: 182 LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYR 233
L+ +P RQT LF+AT+T +V+ L+ R K P+ +I ++ + TLKQ Y
Sbjct: 290 LSALPPSTARQTLLFTATVTPEVRALKSMPRPASKPPIFVTEISTENQATIPRTLKQSYL 349
Query: 234 FVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +++ +L +L+ SS ++F LL MLR LG RA + + QS+
Sbjct: 350 LVPLTHREAFLHVLLSTDGNSSKAAIIFCNHTKTADLLERMLRRLGHRATSLHSLLPQSE 409
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R L++F+A IL+ TDVA+RGLDIPSV +VIN+ +P N DY+HRVGRTARAGR G
Sbjct: 410 RTANLSRFRASAARILVATDVAARGLDIPSVSLVINFGVPRNPDDYVHRVGRTARAGREG 469
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
A++LV Q +++ L IE +G+K+ E+ +EE V + +L+ V EAKR
Sbjct: 470 EAVTLVGQRDVQLVLAIEDRVGRKMEEW--KEEGVSIEGRIVRGGILKEVGEAKR 522
>gi|302878537|ref|YP_003847101.1| DEAD/DEAH box helicase [Gallionella capsiferriformans ES-2]
gi|302581326|gb|ADL55337.1| DEAD/DEAH box helicase domain protein [Gallionella
capsiferriformans ES-2]
Length = 461
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 231/382 (60%), Gaps = 5/382 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ F +L L E++ A G+ P+ IQA+AIP LEG DL+ AQTG+GKT AFALP+
Sbjct: 1 MNNFADLNLAPEILRALIESGYTKPTPIQAQAIPLVLEGSDLMAGAQTGTGKTAAFALPV 60
Query: 67 LQALLEIAENQRTVP--AFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
LQ L+ A + + A A +L PTRELAIQ+ +A LR V+ GGVD+
Sbjct: 61 LQKLMPFASSSPSPARHAVRALILVPTRELAIQVEASVKAYAKYSHLRSLVVFGGVDIKT 120
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
QT L I+VATPGRL+DH+ K L ++ LVLDEADR+L+ F L IL +
Sbjct: 121 QTPHLRAGIEILVATPGRLLDHIEQ-KSVQLNQVQMLVLDEADRMLDMGFMPDLKRILAL 179
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+PR RQ +FSAT + ++KKL L NP IE A +T + + Q+ V + K L
Sbjct: 180 LPRQRQNLMFSATFSAEIKKLSAEFLVNPKLIEVARSNATSENVTQKVYLVGHEEKHALL 239
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
++L A T+VFT+T +A L+ G + I G SQ +R+ AL+ FK+G+
Sbjct: 240 AHLLRGTGAVQTLVFTKTKLTASRIARQLQREGFASDAIHGDKSQLERMQALDAFKSGKI 299
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+LI TDVA+RGLDI + +VINY+IP+ ++DY+HR+GRT RAG GVAISLV E ++
Sbjct: 300 TVLIATDVAARGLDIDQLPVVINYEIPSAAEDYVHRIGRTGRAGAFGVAISLVAPEEEKY 359
Query: 365 YLQIEKLIGKKLP--EFPAEEE 384
L+IEKLI + E PA E+
Sbjct: 360 LLEIEKLIKCTIQRVELPASEK 381
>gi|339007892|ref|ZP_08640466.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|338775095|gb|EGP34624.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
Length = 506
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 234/392 (59%), Gaps = 12/392 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL ++ + N+G++ + IQA IP AL G+DLIG AQTG+GKT AF +P+++
Sbjct: 3 TFNELGLSPSVLRSISNMGFEEATPIQALTIPVALTGRDLIGQAQTGTGKTVAFGIPMIE 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ + + N VL+PTRELA+Q+SE+ LG ++ + GG D+M+Q A
Sbjct: 63 KI-DTSSNH-----IQGIVLAPTRELAVQVSEELIKLGQYTGIKTLPIYGGQDIMRQIRA 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K PH++VATPGRL+DH+ N + L ++ LVLDEAD +LN F + ++ IL IP
Sbjct: 117 LKKNPHVIVATPGRLIDHI-NRRTIRLQNIQTLVLDEADEMLNMGFIEEIESILEQIPDE 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM ++++ L + LKNP KI +K TV ++Q Y V K K + +L
Sbjct: 176 RQTLLFSATMPRQIESLAQRYLKNPEKITVKAKEVTVPNIEQVYMEVQEKLKFDVMTRLL 235
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VF RT L+ L G A I G ++Q+KR L +FK G +IL+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNKRGYSAEGIHGDLTQAKRDSVLRQFKEGTIDILV 295
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI V V N+DIP + + Y+HR+GRT RAG+TGVA + V EL+ I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVATTFVTSRELDHLRMI 355
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 400
E + +K+ P V L E + A+RI+
Sbjct: 356 EHVTKRKMSRRP-----VPTLTEAIEGAQRIT 382
>gi|374600905|ref|ZP_09673907.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|423325478|ref|ZP_17303318.1| hypothetical protein HMPREF9716_02675 [Myroides odoratimimus CIP
103059]
gi|373912375|gb|EHQ44224.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|404606330|gb|EKB05882.1| hypothetical protein HMPREF9716_02675 [Myroides odoratimimus CIP
103059]
Length = 370
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 227/369 (61%), Gaps = 4/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK+L + ++EA VG++TP+ IQ + IPH L+G+DLIG AQTG+GKT +FA+PILQ
Sbjct: 2 SFKKLNIIQPILEAVSKVGYQTPTAIQEQTIPHILQGRDLIGCAQTGTGKTASFAIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + +++ + + +L+PTRELAIQI+E F+ G + LR + GGV +Q
Sbjct: 62 LLNQKSSSKKVIRSL---ILTPTRELAIQINENFKIYGEFLRLRHLAVFGGVPQKKQVAQ 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I++ATPGRL+D L N ++ +VLDEADR+L+ F K + +IL IP
Sbjct: 119 LNRGVDILIATPGRLLD-LLNQHCLDFNHVEIVVLDEADRMLDMGFVKDVKKILTKIPSK 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM ++KKL ++NP++I ST T+KQ FV + K L IL
Sbjct: 178 RQTLFFSATMPIEIKKLALQIVRNPIEITVTPISSTARTIKQSIYFVEKEEKLNLLFTIL 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S ++VF RT L L +LG I G+ SQ+ RL ALN FK +LI
Sbjct: 238 KDKSIKRSLVFARTKHGADKLVKKLASLGIYTAAIHGNKSQNARLKALNDFKNNRIRVLI 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + V+NY++P + Y+HR+GRT RAG G A+S ++ +L+ +I
Sbjct: 298 ATDIAARGIDIAELPHVLNYELPNEPESYVHRIGRTGRAGVQGTAVSFCDEDQLKDLKKI 357
Query: 369 EKLIGKKLP 377
EKLIG +P
Sbjct: 358 EKLIGFTIP 366
>gi|261201117|ref|XP_002626959.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis SLH14081]
gi|239594031|gb|EEQ76612.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis SLH14081]
gi|239607095|gb|EEQ84082.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis ER-3]
Length = 553
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 266/444 (59%), Gaps = 33/444 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + K P+ IQ IP ++G+D IG ++TGSGKT AFA PILQ
Sbjct: 122 SFASLGLAPWLVGSLSVMAIKRPTAIQKACIPEIIKGRDCIGGSRTGSGKTVAFAAPILQ 181
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ AE+ V FA +L+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q +A
Sbjct: 182 ---KWAEDPFGV---FAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIA 235
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEI---L 182
L +RPHIV+ATPGRL DH+T++ ++ L + +VLDEADRLL L ++ L
Sbjct: 236 LSQRPHIVIATPGRLADHITSSGADTICGLNRTRVVVLDEADRLLASGPGSMLPDVETCL 295
Query: 183 NVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYRF 234
+ +P RQT LF+AT+T +V+ L+ R K P+ +I ++ + TLKQ Y
Sbjct: 296 SALPPSTSRQTLLFTATVTPEVRALKSMPRPANKPPIFVTEISTENQATIPPTLKQTYLQ 355
Query: 235 VPAKYKDCYLVYIL-TEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 292
VP +++ +L +L TE +A +++F LL MLR LG R + + QS+R
Sbjct: 356 VPLTHREAFLHTLLSTEANAPKPSIIFCNRTKTADLLERMLRRLGHRVTSLHSLLPQSER 415
Query: 293 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 352
L++F+A IL+ TDVA+RGLDIPSV +VIN+D+P N DY+HRVGRTARAGR G
Sbjct: 416 TANLSRFRASAARILVATDVAARGLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGREGE 475
Query: 353 AISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
A++LV Q +++ L IE +GKK+ E+ +EE V + E + + IK+ G +R
Sbjct: 476 AVTLVGQRDVQLVLAIEDRVGKKMIEW--KEEGVSI------EGRVVRGGIIKEVGEAKR 527
Query: 413 RKGGDEDDDIGRQ-FGINKKKLSK 435
G+ ++ GR G +KL K
Sbjct: 528 EAMGEVEE--GRDVLGRRVRKLKK 549
>gi|402307634|ref|ZP_10826656.1| DEAD/DEAH box helicase [Prevotella sp. MSX73]
gi|400378346|gb|EJP31204.1| DEAD/DEAH box helicase [Prevotella sp. MSX73]
Length = 375
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 230/369 (62%), Gaps = 2/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL + +++A E ++TP+ IQ +AIP LEG+DL+G+AQTG+GKT AFA+PI+Q
Sbjct: 2 TFNELNISKPILKALELKEYETPTPIQQKAIPIGLEGRDLLGIAQTGTGKTAAFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + A++ R A +L+PTRELAIQI E F+ LRC V+ GGV Q
Sbjct: 62 QLAKSADDNRR-RDIKALILTPTRELAIQIEECFKDYSKFTRLRCCVIFGGVSQNGQVKE 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I++ATPGRL+D L + +L +++ VLDEADR+L+ F + +++ ++P+
Sbjct: 121 LERGVDILIATPGRLLD-LISQHIITLEHIRHFVLDEADRMLDMGFIHDIKKLIPLLPKR 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM + + KL ++ L P ++E A S VDT++Q+ FV K LV +L
Sbjct: 180 RQTLLFSATMPETIAKLSKSLLYKPARVEVAPVSSVVDTIEQRLYFVEKPQKTDLLVSVL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VF+RT +A L+ I G+ SQ+ R AL FK+G+ +++
Sbjct: 240 KNAGNRSALVFSRTKHGADRIARKLKARHIECEAIHGNKSQNARQRALTNFKSGKTRVIV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI ++ MVINYD+P ++ Y+HR+GRT RAG +GVA++ Q E I
Sbjct: 300 ATDIAARGIDIANLQMVINYDLPDVAETYVHRIGRTGRAGNSGVALTFCTQDERPMVRDI 359
Query: 369 EKLIGKKLP 377
+KL GKKLP
Sbjct: 360 QKLTGKKLP 368
>gi|327351047|gb|EGE79904.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis ATCC
18188]
Length = 553
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 266/444 (59%), Gaps = 33/444 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + K P+ IQ IP ++G+D IG ++TGSGKT AFA PILQ
Sbjct: 122 SFASLGLAPWLVGSLSVMAIKRPTAIQKACIPEIIKGRDCIGGSRTGSGKTVAFAAPILQ 181
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ AE+ V FA +L+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q +A
Sbjct: 182 ---KWAEDPFGV---FAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIA 235
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEI---L 182
L +RPHIV+ATPGRL DH+T++ ++ L + +VLDEADRLL L ++ L
Sbjct: 236 LSQRPHIVIATPGRLADHITSSGADTICGLNRTRVVVLDEADRLLASGPGSMLPDVETCL 295
Query: 183 NVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYRF 234
+ +P RQT LF+AT+T +V+ L+ R K P+ +I ++ + TLKQ Y
Sbjct: 296 SALPPSTSRQTLLFTATVTPEVRALKSMPRPANKPPIFVTEISTENQATIPPTLKQTYLQ 355
Query: 235 VPAKYKDCYLVYIL-TEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 292
VP +++ +L +L TE +A +++F LL MLR LG R + + QS+R
Sbjct: 356 VPLTHREAFLHTLLSTEANAPKPSIIFCNRTKTADLLERMLRRLGHRVTSLHSLLPQSER 415
Query: 293 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 352
L++F+A IL+ TDVA+RGLDIPSV +VIN+D+P N DY+HRVGRTARAGR G
Sbjct: 416 TANLSRFRASAARILVATDVAARGLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGREGE 475
Query: 353 AISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
A++LV Q +++ L IE +GKK+ E+ +EE V + E + + IK+ G +R
Sbjct: 476 AVTLVGQRDVQLVLAIEDRVGKKMIEW--KEEGVSI------EGRVVRGGIIKEVGEAKR 527
Query: 413 RKGGDEDDDIGRQ-FGINKKKLSK 435
G+ ++ GR G +KL K
Sbjct: 528 EAMGEVEE--GRDVLGRRVRKLKK 549
>gi|452846401|gb|EME48333.1| hypothetical protein DOTSEDRAFT_76016 [Dothistroma septosporum
NZE10]
Length = 493
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/434 (41%), Positives = 258/434 (59%), Gaps = 33/434 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LG LV A ++ K P++IQ IP L G+D IG ++TGSGKT AF +PILQ
Sbjct: 53 TFPDLGTDKWLVSALSHMSIKWPTRIQKATIPQILAGRDCIGGSRTGSGKTIAFGVPILQ 112
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ R FA +++PTRELA+QI EQF+A+G ++C ++ GG DM QQ ++
Sbjct: 113 ------QWARQPSGIFALIMTPTRELALQIYEQFQAIGGSQGVKCVLVTGGADMRQQAIS 166
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSL----DEI 181
L +RPH+V+ATPGRL DH+ N+ ++ LK Y+VLDEADRLL + S+ +
Sbjct: 167 LSQRPHVVIATPGRLADHIENSGEDTIQGLKKVKYVVLDEADRLLASGGKGSMLPDVETC 226
Query: 182 LNVIPR--MRQTYLFSATMTKKVKKLQ---RACLKNPVKIEAAS--KYSTVDTLKQQYRF 234
L+ +P+ RQT LF+ATMT +V+ L+ RA + PV + + DTL Q Y+
Sbjct: 227 LDYLPQGSQRQTCLFTATMTPEVRALKEMPRAKGQQPVYVCEVDIDSLAIPDTLTQTYQL 286
Query: 235 VPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
V +K+ YL ++L A+ +T++F + L+ +LR L R + + +
Sbjct: 287 VNVLHKEKYL-HVLLSTPANVEKTTIIFCNRTETANLVEYLLRLLEHRVTALHSGLQHTD 345
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R+ L +F+A IL+ TDVASRGLDIP V +VINYD+P N DYIHRVGRTARAGR G
Sbjct: 346 RVNNLARFRARAARILVATDVASRGLDIPDVGLVINYDLPRNPDDYIHRVGRTARAGRKG 405
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAE----EEEVLL-LLERVTEAKRISQMTIKD 406
+ISLV Q ++E IE+ +G+++ + E E V+ L V + KR + + I++
Sbjct: 406 TSISLVGQRDVELVKAIEERVGREMVAYAEEKINVESRVIKEALNVVGDKKREAMLAIEE 465
Query: 407 S----GNKRRRKGG 416
GN+RR GG
Sbjct: 466 GRDVKGNRRRGFGG 479
>gi|346327204|gb|EGX96800.1| ATP dependent RNA helicase (Dbp8) [Cordyceps militaris CM01]
Length = 575
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/433 (41%), Positives = 258/433 (59%), Gaps = 37/433 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L +R LV++ N+ + P+ IQ IP L+G+D IG ++TGSGKT AFA+P+LQ
Sbjct: 144 TFTALRVRPWLVQSLANMAIRRPTGIQKACIPEILQGRDCIGGSRTGSGKTVAFAVPMLQ 203
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E A F VL+PTRELA+QI EQF A+ + SL+ ++ GG DM Q +A
Sbjct: 204 RWAEDPT------AIFGLVLTPTRELALQIYEQFRAIAAPQSLKVLLITGGADMRPQAIA 257
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLN---------DDFEK 176
L +RPH+V+ATPGRL DH+ + ++G L+ Y+VLDEADRLL+ D E+
Sbjct: 258 LRQRPHVVIATPGRLADHVRTSGEDTVGGLRRVRYVVLDEADRLLHAGAGPGSMLPDVEQ 317
Query: 177 SLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLK---NPVKI--EAASKYSTVDTLKQQ 231
L + P RQT LF+ATMT +V+ L +K PV + + + TL+Q+
Sbjct: 318 CLAALPP--PTERQTLLFTATMTPEVRALAAMPVKPGKQPVFVCEVDTQRLAIPATLRQR 375
Query: 232 YRFVPAKYKDCYL-VYILTEVSASSTMVF--TRTCDATRLLALMLRNLGQRAIPISGHMS 288
+ +P +K+ YL +++LTE + T++ RT A L MLR L R + +
Sbjct: 376 HLQIPVTHKEHYLHMFLLTEANVDKTIILFCNRTATAD-FLHHMLRLLDHRVTSLHSKLP 434
Query: 289 QSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAG 348
Q +R+ L +F+A ILI TDVA+RGLDIP V +VINYD+P + DYIHRVGRTARAG
Sbjct: 435 QRQRVDNLARFRASAARILIATDVAARGLDIPEVSLVINYDVPRDPDDYIHRVGRTARAG 494
Query: 349 RTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE----EEEVLL-LLERVTEAKRISQMT 403
R G A++LV Q ++E L IE+ +G+++ + + E VL L+ V+E KR + +
Sbjct: 495 RDGEAVTLVGQRDVELVLAIEERVGREMEAWAEDGVNLETRVLREALKTVSEKKREALLE 554
Query: 404 I---KDSGNKRRR 413
+ K+ G KR+R
Sbjct: 555 VEENKEVGGKRKR 567
>gi|419954669|ref|ZP_14470805.1| ATP-dependent RNA helicase [Pseudomonas stutzeri TS44]
gi|387968533|gb|EIK52822.1| ATP-dependent RNA helicase [Pseudomonas stutzeri TS44]
Length = 439
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/374 (42%), Positives = 228/374 (60%), Gaps = 12/374 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L+ E + ++ P+ +QAEAIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLIDPLLRTLETLDYRKPTPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALL----EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L ++A N + A VL PTRELA Q+ E F G + LR + GGV +
Sbjct: 62 RLTMEGAKVASN-----SVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINP 116
Query: 125 QTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K ++VATPGRL+D + N GFS L+ LVLDEADR+L+ F LD++
Sbjct: 117 QMMALRKGIDVLVATPGRLLDLYRQNAVGFS--QLQALVLDEADRMLDLGFADELDQLFA 174
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+PR RQT LFSAT ++ ++++ R L++P+ +E + + + T+KQ V K K
Sbjct: 175 ALPRKRQTLLFSATFSEAIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSEL 234
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+++L E +VF +T L L+ G + I G Q+ RL AL +FKAGE
Sbjct: 235 FLHLLAERRWGQVLVFVKTRKGVDQLVDELQAQGIASDAIHGDKPQASRLRALERFKAGE 294
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVA+RGLDI + V+N+D+PT ++DY+HR+GRT RAG +G AISLV+ E++
Sbjct: 295 VQVLVATDVAARGLDIHDLPQVVNFDLPTVAEDYVHRIGRTGRAGASGEAISLVSADEVD 354
Query: 364 WYLQIEKLIGKKLP 377
IE LI + LP
Sbjct: 355 QLAAIETLINQVLP 368
>gi|423134919|ref|ZP_17122565.1| hypothetical protein HMPREF9715_02340 [Myroides odoratimimus CIP
101113]
gi|371644248|gb|EHO09787.1| hypothetical protein HMPREF9715_02340 [Myroides odoratimimus CIP
101113]
Length = 370
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 224/367 (61%), Gaps = 5/367 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L L E+ A +G+ T ++IQ +AIP LEGKD+IG AQTG+GKT AFA+PILQ
Sbjct: 3 FKDLALTQEIQTALTKIGYSTATEIQQKAIPPILEGKDVIGTAQTGTGKTAAFAIPILQK 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L ++ + + A +L PTRELAIQ+ + F + ++L+ L GGV + Q AL
Sbjct: 63 LHSTPKSTKGIRAL---ILVPTRELAIQVKDSFLDYSTELALKTVTLFGGVPLPPQVRAL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ P I+VATPGRL+D L N K L L+ LVLDEAD++L+ F L +IL +P R
Sbjct: 120 KQHPEIIVATPGRLLD-LINQKIVKLSNLEILVLDEADQMLDMGFIHDLKKILKFVPTKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q+ FSATM K++++ R + PVKIE A++ T T++QQ + K K L IL
Sbjct: 179 QSLFFSATMPKEIEQFARTIVYKPVKIEVAAQVITATTIEQQVYYTEKKDKKTLLHTILK 238
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E + ST+VFTRT L L+ + A+ I G+ SQS R+ AL+ FK + NILI
Sbjct: 239 E-NTESTLVFTRTKYEANNLVKYLQKVNMVAMAIHGNKSQSARVKALDDFKNKKINILIA 297
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VINYDIP + Y+HR+GRT RAG GVA+ + + I+
Sbjct: 298 TDIAARGIDISKLPFVINYDIPDKPETYVHRIGRTGRAGVQGVAMCFCTPEQRKELKDIQ 357
Query: 370 KLIGKKL 376
+ G K+
Sbjct: 358 RFTGIKM 364
>gi|218261592|ref|ZP_03476346.1| hypothetical protein PRABACTJOHN_02014 [Parabacteroides johnsonii
DSM 18315]
gi|218223947|gb|EEC96597.1| hypothetical protein PRABACTJOHN_02014 [Parabacteroides johnsonii
DSM 18315]
Length = 419
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/429 (40%), Positives = 247/429 (57%), Gaps = 12/429 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++L L + + +A + + TP+ IQAEAIP L+G DL+G AQTG+GKT AF++PI+Q
Sbjct: 2 TFEQLELIEPIRKALKKEKYTTPTPIQAEAIPLVLDGSDLLGCAQTGTGKTAAFSIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ E + R P A VL+PTRELAIQI E F A G ++ V+ GGV QT A
Sbjct: 62 KIEEQI-SSRCKPGIKALVLTPTRELAIQIGESFTAYGCYTHVKHTVIFGGVGQKPQTDA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L + +++ATPGRL+D L+ +GF L TL+Y VLDEADR+L+ F + IL ++P+
Sbjct: 121 LERGVDVLIATPGRLLDLLS--QGFIRLDTLEYFVLDEADRMLDMGFIHDIKRILPLLPK 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQ+ FSATM ++++L L P K+E STVDT+ Q FV K L +
Sbjct: 179 KRQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSSTVDTIDQSVYFVEKVEKINLLKNL 238
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S S +VFTRT +A +L G A I G Q+ R AL+ FK +L
Sbjct: 239 LEDRSLESVLVFTRTKYGADKVARVLNKSGIGAEAIHGDKGQNARQRALSSFKDHTLRVL 298
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TD+ASRG+D+ + VINYD+P + Y+HR+GRT RAGR+G+A S + E+ +
Sbjct: 299 IATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRTGRAGRSGIAFSFCDVEEVPYLKD 358
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFG 427
I+KLIGK +P E + E V E K+ +K+ +R G D R
Sbjct: 359 IQKLIGKDVPVAGGHMFETAEVKEAVAEKKK----AMKEESKRRNMFGNKRDGSFWR--- 411
Query: 428 INKKKLSKR 436
NKK+ + +
Sbjct: 412 -NKKRTANK 419
>gi|452125822|ref|ZP_21938405.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|452129183|ref|ZP_21941759.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
gi|451920917|gb|EMD71062.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|451925053|gb|EMD75193.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
Length = 457
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/414 (40%), Positives = 245/414 (59%), Gaps = 13/414 (3%)
Query: 19 LVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQR 78
++++ G+ +P+ IQA+AIP +EG+D++G AQTG+GKT AF +PIL L+ +A N
Sbjct: 1 MLKSIAETGYTSPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTVPILHRLMPLA-NSS 59
Query: 79 TVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHI 135
PA A +L+PTRELA Q+ E + LR AV+ GGVD+ Q AL + I
Sbjct: 60 ASPARHPVRALILTPTRELADQVYESVKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEI 119
Query: 136 VVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFS 195
+VATPGRL+DH+ K +L + LVLDEADR+L+ F L+ I+ ++P RQ LFS
Sbjct: 120 LVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLLPPQRQGLLFS 178
Query: 196 ATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASS 255
AT + +++KL R+ L P+++E A++ +T DT+ Q + K +V+++
Sbjct: 179 ATFSNEIRKLGRSYLNQPIELEVAARNATADTVTQIAYPMTGDAKRAAVVHLVKSRGLKQ 238
Query: 256 TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASR 315
+VF+ T T LA L G +A I G SQ+ R+ AL FKAGE +L+ TDVA+R
Sbjct: 239 VIVFSNTKIGTARLARDLERDGVKAESIHGDKSQADRMKALEAFKAGELEVLVATDVAAR 298
Query: 316 GLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKK 375
GLD+ V VINYD+P N++DY+HR+GRT RAG +G AI+L E + L IEKLI ++
Sbjct: 299 GLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTPEEERYLLDIEKLIKRQ 358
Query: 376 LP----EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 425
+P E PAE LL R E + G++ R+G D D R+
Sbjct: 359 VPRGKLELPAE----LLAHGRGRERSGSRESREGRDGSRENREGRDSWRDTNRR 408
>gi|423327615|ref|ZP_17305423.1| hypothetical protein HMPREF9711_00997 [Myroides odoratimimus CCUG
3837]
gi|404606267|gb|EKB05825.1| hypothetical protein HMPREF9711_00997 [Myroides odoratimimus CCUG
3837]
Length = 370
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 224/367 (61%), Gaps = 5/367 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L L E+ A +G+ T ++IQ +AIP LEGKD+IG AQTG+GKT AFA+PILQ
Sbjct: 3 FKDLALTQEIQTALTKIGYSTATEIQQKAIPPILEGKDVIGTAQTGTGKTAAFAIPILQK 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L ++ + + A +L PTRELAIQ+ + F + ++L+ L GGV + Q AL
Sbjct: 63 LHSTPKSTKGIRAL---ILVPTRELAIQVKDSFLDYSTELALKTVTLFGGVPLPPQVRAL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ P I+VATPGRL+D L N K L L+ LVLDEAD++L+ F L +IL +P R
Sbjct: 120 KQHPEIIVATPGRLLD-LINQKIVKLSNLEILVLDEADQMLDMGFIHDLKKILKFVPTKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q+ FSATM K++++ R + PVKIE A++ T T++QQ + K K L IL
Sbjct: 179 QSLFFSATMPKEIEQFARTIVYKPVKIEVAAEVITATTIEQQVYYTEKKDKKALLHTILK 238
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E + ST+VFTRT L L+ + A+ I G+ SQS R+ AL+ FK + NILI
Sbjct: 239 E-NTESTLVFTRTKYEANNLVKYLQKVNMVAMAIHGNKSQSARVKALDDFKNKKINILIA 297
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VINYDIP + Y+HR+GRT RAG GVA+ + + I+
Sbjct: 298 TDIAARGIDISKLPFVINYDIPDKPETYVHRIGRTGRAGVQGVAMCFCTPEQQKELKDIQ 357
Query: 370 KLIGKKL 376
+ G K+
Sbjct: 358 RFTGIKM 364
>gi|365875010|ref|ZP_09414540.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis Ag1]
gi|442589346|ref|ZP_21008154.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis R26]
gi|365757122|gb|EHM99031.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis Ag1]
gi|442560956|gb|ELR78183.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis R26]
Length = 424
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 226/371 (60%), Gaps = 7/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
F +L L + + +A + G+KTP+ IQ +AIP L GKDL+G AQTG+GKT AFA+PILQ
Sbjct: 2 NFNDLKLIEPISKALQEEGYKTPTSIQEQAIPKILAGKDLLGCAQTGTGKTAAFAIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E +EN+ A +L+PTRELAIQI E FEA G + L+ V+ GGV Q
Sbjct: 62 LLTERSENKHRKGVVKALILTPTRELAIQIEENFEAYGRHLPLKTMVIFGGVKQGAQEEK 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL---VLDEADRLLNDDFEKSLDEILNVI 185
L + I+VATPGRL+D + G + TLK L VLDEADR+L+ F + IL +
Sbjct: 122 LKRGVDILVATPGRLLDFI----GQGIITLKNLDIFVLDEADRMLDMGFVHDVKRILKYL 177
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ SATM K+++KL L NPVK+E A ST +T+ Q FV + K L+
Sbjct: 178 PEKRQNLFLSATMPKEIQKLASEILVNPVKVEVAPVSSTAETIDQSVFFVEKEDKINLLI 237
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + S S +VF+RT +A L A I G+ SQ+ R ALN FK+G+
Sbjct: 238 HLLQDQSLSPVIVFSRTKHGADKIAKKLNQSKISAEAIHGNKSQNARQNALNNFKSGKTR 297
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TD+A+RG+DI ++ V+N+++ ++ Y+HR+GRT RAG +G + S V+ +L
Sbjct: 298 ILVATDIAARGIDIDNLKYVVNFELSDVAETYVHRIGRTGRAGASGTSFSFVDGLDLVNL 357
Query: 366 LQIEKLIGKKL 376
EKLIGKK+
Sbjct: 358 RNTEKLIGKKI 368
>gi|242784404|ref|XP_002480380.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720527|gb|EED19946.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
Length = 538
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/415 (40%), Positives = 246/415 (59%), Gaps = 34/415 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L + LV++ + + P+ IQ IP L+GKD IG ++TGSGKT AFA+PILQ
Sbjct: 109 TFANLNVAPWLVKSLSTMAIRRPTAIQKSCIPEILQGKDCIGGSRTGSGKTIAFAVPILQ 168
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E FA VL+PTRELA+QI EQF+A+ + SL+ ++ GG DM Q +A
Sbjct: 169 KWAEDPF------GIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGTDMRPQAIA 222
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSLDEI--- 181
L +RPH+++ATPGRL DH+ T G L ++ +V+DEADRLL L ++
Sbjct: 223 LSQRPHVIIATPGRLADHI-RTSGEDTIVGLNRVRMIVMDEADRLLTSGHGSMLPDVETC 281
Query: 182 LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPVKIEAASKYSTVD---TLKQQYR 233
L+ +P RQT LF+AT+T +V+ L+ R + P+ + + TLKQ Y
Sbjct: 282 LSALPPSSERQTLLFTATVTPEVRALKSVPRPANRPPIHVTEIGTENIAPIPPTLKQTYL 341
Query: 234 FVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +++ +L +L+ SS ++F LL MLR L R + + QS+
Sbjct: 342 QVPMTHREAFLHVLLSTEGNSSKPAIIFCNRTKTADLLERMLRRLSHRVTSLHSLLPQSE 401
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R L++F+A +L+ TDVASRGLDIP+V +VIN+D+P N DY+HRVGRTARAGRTG
Sbjct: 402 RTANLSRFRASAARLLVATDVASRGLDIPNVSLVINFDVPRNPDDYVHRVGRTARAGRTG 461
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
+++LV Q +++ L IEK +G+++ ++ EEE V + +L+ V EAKR
Sbjct: 462 ESVTLVGQRDVQLVLAIEKRVGRQMVQW--EEEGVSVESRVVKGGVLKEVGEAKR 514
>gi|421871323|ref|ZP_16302945.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
gi|372459950|emb|CCF12494.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
Length = 506
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 234/392 (59%), Gaps = 12/392 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL ++ + N+G++ + IQA IP AL G+DLIG AQTG+GKT AF +P+++
Sbjct: 3 TFNELGLSPSVLRSISNMGFEEATPIQALTIPVALTGRDLIGQAQTGTGKTVAFGIPMIE 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ + + N VL+PTRELA+Q+SE+ LG ++ + GG D+M+Q A
Sbjct: 63 KI-DTSSNH-----IQGIVLAPTRELAVQVSEELIKLGQYTGIKTLPIYGGQDIMRQIRA 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K PH++VATPGRL+DH+ N + L ++ LVLDEAD +LN F + ++ IL IP
Sbjct: 117 LKKNPHVIVATPGRLIDHI-NRRTIRLQNIQTLVLDEADEMLNMGFIEEIESILEQIPDE 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM ++++ L + LKNP KI +K TV ++Q Y V K K + +L
Sbjct: 176 RQTLLFSATMPRQIESLAQRYLKNPEKITVKAKEVTVPNIEQVYMEVQEKLKFDVMTRLL 235
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VF RT L+ L G A I G ++Q+KR L +FK G +IL+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNKRGYSAEGIHGDLTQAKRDSVLRQFKEGTIDILV 295
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI V V N+DIP + + Y+HR+GRT RAG+TGVA + V E++ I
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVATTFVTSREIDHLRMI 355
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 400
E + +K+ P V L E + A+RI+
Sbjct: 356 EHVTKRKMSRRP-----VPTLTEAIEGAQRIT 382
>gi|315606927|ref|ZP_07881933.1| ATP-dependent RNA helicase RhlE [Prevotella buccae ATCC 33574]
gi|315251308|gb|EFU31291.1| ATP-dependent RNA helicase RhlE [Prevotella buccae ATCC 33574]
Length = 375
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 230/369 (62%), Gaps = 2/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL + +++A E ++TP+ IQ +AIP LEG+DL+G+AQTG+GKT AFA+PI+Q
Sbjct: 2 TFNELNISKPILKALELKEYETPTPIQQKAIPIGLEGRDLLGIAQTGTGKTAAFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + A++ R A +L+PTRELAIQI E F+ LRC V+ GGV Q
Sbjct: 62 QLAKSADDNRR-RDIKALILTPTRELAIQIEECFKDYSKFTRLRCCVIFGGVSQNGQVKE 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I++ATPGRL+D L + +L +++ VLDEADR+L+ F + +++ ++P+
Sbjct: 121 LERGVDILIATPGRLLD-LISQHIITLEHIRHFVLDEADRMLDMGFIHDIKKLIPLLPKR 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM + + KL ++ L P ++E A S VDT++Q+ FV K LV +L
Sbjct: 180 RQTLLFSATMPETIAKLSKSLLYKPARVEVAPVSSVVDTIEQRLYFVEKPQKTDLLVSVL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VF+RT +A L+ I G+ SQ+ R AL FK+G+ +++
Sbjct: 240 KNDGNRSALVFSRTKHGADRIARKLKARHIECEAIHGNKSQNARQRALTNFKSGKTRVIV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI ++ MVINYD+P ++ Y+HR+GRT RAG +GVA++ Q E I
Sbjct: 300 ATDIAARGIDIANLQMVINYDLPDVAETYVHRIGRTGRAGNSGVALTFCTQEERPMVRDI 359
Query: 369 EKLIGKKLP 377
+KL GKKLP
Sbjct: 360 QKLTGKKLP 368
>gi|386002133|ref|YP_005920432.1| ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
gi|357210189|gb|AET64809.1| ATP-dependent RNA helicase, putative [Methanosaeta harundinacea
6Ac]
Length = 418
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 226/370 (61%), Gaps = 4/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++L + + L A G+ P+ IQAEAIPH L G+DL+G+AQTG+GKT AF LP+LQ
Sbjct: 3 FEDLDIAEPLQRALTKEGYANPTPIQAEAIPHLLRGEDLLGIAQTGTGKTAAFVLPVLQR 62
Query: 70 LLEIAENQRTVP-AFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ E E +RTVP A A VL+PTRELA QI E F G + A + GGV Q A
Sbjct: 63 ISE--ERRRTVPGAPRALVLAPTRELAAQIDESFGTYGQFLQFSHAAVFGGVSQEPQVKA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +VATPGRL+D L L +++ VLDEADR+L+ F K + I++ +P+
Sbjct: 121 LSRGVEALVATPGRLLD-LMEQGHIDLKGIEFFVLDEADRMLDMGFAKDVHRIVSALPKK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R + F+ATM++++ +L LK+PV++E A + + V++++Q+ FV K K+ L+ +L
Sbjct: 180 RHSLFFAATMSREIGELAGRLLKDPVRVEVAPQATPVESIEQRIFFVDQKEKNPLLIGLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VFTRT +A +L G RA I G +Q++RL AL FKAG +L+
Sbjct: 240 QQKFLKRVLVFTRTKRRADRVAKVLTRSGIRADAIHGDRTQNQRLAALRGFKAGRLQVLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINYD+P + Y+HR+GRT RAGR G A S + E + I
Sbjct: 300 ATDIAARGIDVEDISHVINYDLPNEPESYVHRIGRTGRAGRAGTAYSFCSAEERSFLRDI 359
Query: 369 EKLIGKKLPE 378
E+L K+ E
Sbjct: 360 ERLTRTKIRE 369
>gi|225560188|gb|EEH08470.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus G186AR]
Length = 539
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/417 (41%), Positives = 252/417 (60%), Gaps = 32/417 (7%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
++ +F LGL LV + + K P+ IQ IP L+G+D IG ++TGSGKT AFA P
Sbjct: 107 DISSFASLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAP 166
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ + AE+ + FA +L+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q
Sbjct: 167 ILQ---KWAEDPFGI---FAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQ 220
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEI- 181
+AL +RPHIV+ATPGRL DH+T++ ++ L + +V DEADRLL L ++
Sbjct: 221 AIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVVVFDEADRLLASGPGSMLPDVE 280
Query: 182 --LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQ 231
L+ +P RQT LF+AT+T +V+ L+ R K P+ ++ +K S TLKQ
Sbjct: 281 TCLSALPPSTARQTLLFTATVTPEVRALKSMPRPANKLPIFVTEVSTENKASIPPTLKQT 340
Query: 232 YRFVPAKYKDCYL-VYILTEV-SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQ 289
Y VP +++ +L I TE S ++F L+ MLR LG R + + Q
Sbjct: 341 YLQVPLTHREAFLHTLISTEANSQKPAIIFCNRTKTADLVERMLRRLGHRVTSLHSLLPQ 400
Query: 290 SKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR 349
S+R L++F+A IL+ TDVA+RGLDIPSV +VIN+D+P N DY+HRVGRTARAGR
Sbjct: 401 SERTANLSRFRASAARILVATDVAARGLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGR 460
Query: 350 TGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
G A++LV Q +++ L IE +G+K+ E+ +EE V + +L+ V EAKR
Sbjct: 461 EGEAVTLVGQRDVQLVLAIEDRVGRKMVEW--KEEGVSIEGRVVRGGILKEVGEAKR 515
>gi|390570352|ref|ZP_10250619.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
gi|389937684|gb|EIM99545.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
Length = 486
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 226/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQAEAIP L G+D++G AQTG+GKT F+LPI+Q
Sbjct: 12 TFDQFGLHADILKAIAEQGYTTPTPIQAEAIPVVLGGRDVMGAAQTGTGKTAGFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL +A + PA A +L+PTRELA Q++ +A SLR AV+ GGVDM Q
Sbjct: 72 RLLPLASTSAS-PARHPVRALILTPTRELADQVAANVQAYAKHTSLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PAERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + +VF + LA L G A I G +QS+R+ AL+ FK GE
Sbjct: 250 KLIRDRGLKQVIVFCNSKIGASRLARQLERDGVVATAIHGDRTQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|442320812|ref|YP_007360833.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
gi|441488454|gb|AGC45149.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
Length = 497
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/369 (43%), Positives = 221/369 (59%), Gaps = 2/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL L D L+ A + G+ TP+ IQA+AIPHAL GKD++G+AQTG+GKT AFALPILQ
Sbjct: 2 TFDELQLHDTLLRAVKAEGYTTPTPIQAKAIPHALAGKDVLGVAQTGTGKTAAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L A P VL+PTRELA Q+ E F G + LR AV+ GGV Q +
Sbjct: 62 RLSAKAPAGGARP-VRCLVLTPTRELAGQVGESFMTYGKNLPLRHAVIFGGVGQGAQVQS 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + ++VATPGRL+D L + SL +L+ VLDEADR+L+ F + +++ +P
Sbjct: 121 LQRGVDVLVATPGRLLD-LMDQGYVSLRSLEVFVLDEADRMLDMGFIHDVRKVIKALPSK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM ++ L R L +PV++E ST +T+ QQ FV + K L ++L
Sbjct: 180 RQTLFFSATMPPEIVDLSRNLLTDPVRVEVTPVSSTAETVAQQVFFVEREQKRGLLTHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VFTRT +A L G A I G+ SQ+ R AL+ F++G +L+
Sbjct: 240 KDGKISRALVFTRTKHGANRVAKQLEGSGVSAAAIHGNKSQNARERALDDFRSGTLRVLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + VINYD+P + Y+HR+GRT RAG G A+S + E + I
Sbjct: 300 ATDIAARGIDIDGLSFVINYDLPNVPEQYVHRIGRTGRAGAQGTALSFCDAEERAYLRDI 359
Query: 369 EKLIGKKLP 377
E+ I + +P
Sbjct: 360 ERTIRRSVP 368
>gi|395763810|ref|ZP_10444479.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 515
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/371 (41%), Positives = 224/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+ A + G+ P+ IQ +AIP L+G+D++G AQTG+GKT F+LPI+Q
Sbjct: 38 TFADFGLAPEIQRALTDQGYTHPTPIQEQAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQ 97
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L+ A + + PA A +L+PTRELA+Q++E +A LR V+ GG+DM Q
Sbjct: 98 LLMAHASSSMS-PARHPVRALILTPTRELAVQVAENVKAYAKHTPLRSTVVFGGMDMKPQ 156
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T+ L IV+ATPGRL+DH+ K SL ++ LV+DEADR+L+ F L I+N++
Sbjct: 157 TVLLRGGVEIVIATPGRLLDHIEQ-KNISLSQVQMLVMDEADRMLDMGFLPDLQRIINLL 215
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQ +FSAT + ++KKL L +P+ IE A T D + Q V K +
Sbjct: 216 PKQRQNLMFSATFSPEIKKLAATFLNDPLTIEVARSNQTADKVTQVVYKVSEDQKHALVA 275
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + +VF+ T LA +L G A I G SQ +R+ AL FK GE +
Sbjct: 276 HLLRQRDLKQVIVFSNTKIGASRLARVLEQEGMSATAIHGDKSQQERMAALEAFKKGEID 335
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G AIS+ + +
Sbjct: 336 VLVATDVAARGLDISDLPCVINFDLPYNAEDYVHRIGRTGRAGASGDAISIYSDKDERLL 395
Query: 366 LQIEKLIGKKL 376
IEKLI + +
Sbjct: 396 ADIEKLIKQSI 406
>gi|307729080|ref|YP_003906304.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1003]
gi|307583615|gb|ADN57013.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1003]
Length = 487
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 229/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A + G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ +A +LR AV+ GGVDM Q
Sbjct: 72 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E S +VF + LA L G A I G SQ++R+ AL+ FK GE
Sbjct: 250 QLIRERSLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQNERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|423015941|ref|ZP_17006662.1| putative ATP-dependent RNA helicase [Achromobacter xylosoxidans
AXX-A]
gi|338781000|gb|EGP45396.1| putative ATP-dependent RNA helicase [Achromobacter xylosoxidans
AXX-A]
Length = 457
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 229/370 (61%), Gaps = 9/370 (2%)
Query: 20 VEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRT 79
+++ G+ TP+ IQA+AIP +EG+D++G AQTG+GKT AF LPIL L+ +A N
Sbjct: 1 MQSIAETGYTTPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSA 59
Query: 80 VPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIV 136
PA A +L+PTRELA Q+ E + LR AV+ GGVD+ Q AL + ++
Sbjct: 60 SPARHPVRALILTPTRELADQVYESVKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVL 119
Query: 137 VATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSA 196
VATPGRL+DH+ K +L + LVLDEADR+L+ F L+ I+ ++P RQ LFSA
Sbjct: 120 VATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSA 178
Query: 197 TMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASST 256
T + +++KL R+ L PV+IE A++ +T +T+ Q + K +V+++
Sbjct: 179 TFSNEIRKLGRSYLNQPVEIEVAARNATANTITQIAYKMSGDQKRAAVVHLVKSRGLKQV 238
Query: 257 MVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRG 316
+VF+ T T LA L G +A I G +Q+ R+ AL FKAGE +L+ TDVA+RG
Sbjct: 239 IVFSNTKIGTARLARELERDGVKAESIHGDKTQADRMKALEAFKAGELEVLVATDVAARG 298
Query: 317 LDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 376
LD+ V VINYD+P N++DY+HR+GRT RAG TG AI+L E + L IEKLI +++
Sbjct: 299 LDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGATGEAIALFTGDEERFLLDIEKLIKREV 358
Query: 377 P----EFPAE 382
P E PA+
Sbjct: 359 PRGTLELPAD 368
>gi|260223394|emb|CBA33917.1| Putative ATP-dependent RNA helicase rhlE [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 520
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 224/371 (60%), Gaps = 6/371 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L L D L A +G+ T + IQA+AIP L GKD++G AQTG+GKT AFALP+LQ
Sbjct: 24 FAQLQLADPLARAVAEMGYTTMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFALPLLQR 83
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L++ EN T PA A VL PTRELA Q+++Q + +LR AV+ GG+DM QT
Sbjct: 84 LMK-HENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSAVVFGGMDMKPQT 142
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L L ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +P
Sbjct: 143 LELKAGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLP 201
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ R T LFSAT + ++K+L + L+NP+ IE A +T T++Q + V K L+
Sbjct: 202 KTRTTLLFSATFSPEIKRLANSYLQNPITIEVARSNATASTVEQHFYRVNDDDKRHALLQ 261
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
I+ VF + L L G RA + G SQ +RL AL FK GE ++
Sbjct: 262 IVRSKDIKQAFVFVNSKLGCARLTRALERDGLRAAALHGDKSQDERLKALEAFKKGEVDL 321
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV-NQYELEWY 365
L+CTDVA+RGLDI V V N DIP N++DY+HR+GRT RAG +G+A+S V +
Sbjct: 322 LVCTDVAARGLDIKDVPAVFNMDIPFNAEDYVHRIGRTGRAGASGLAVSFVGGGNDARLV 381
Query: 366 LQIEKLIGKKL 376
IEKLI K+
Sbjct: 382 ADIEKLIKTKI 392
>gi|325284979|ref|YP_004260769.1| DEAD/DEAH box helicase [Cellulophaga lytica DSM 7489]
gi|324320433|gb|ADY27898.1| DEAD/DEAH box helicase domain protein [Cellulophaga lytica DSM
7489]
Length = 429
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 227/370 (61%), Gaps = 5/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK LGL + L++A + G+ TPS IQ +AIP LEGKD++ AQTG+GKT F LP+L
Sbjct: 2 TFKNLGLSNNLLKAIDKKGYTTPSPIQEKAIPPVLEGKDVLASAQTGTGKTAGFTLPLLH 61
Query: 69 ALLE-IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L E A R V A +L+PTRELA QI + + LR AV+ GGV+ Q
Sbjct: 62 LLSEQKALRHRPVRAL---ILTPTRELAAQIFANVKEYSEFLDLRSAVIFGGVNQKPQIA 118
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L + ++VATPGRL+D L N + SL ++ VLDEADR+L+ F + ++ ++ +IP
Sbjct: 119 NLKRGMDVLVATPGRLLD-LHNQRFLSLDKVEIFVLDEADRMLDMGFLRDIERVMKLIPA 177
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQ +FSAT +K +KKL L NP+++EA + + V+ +KQ+ V K ++ +
Sbjct: 178 KRQNLMFSATFSKDIKKLAHGILNNPIQVEATPENTAVEVIKQKVYRVAKGKKTGLIIKL 237
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+++ + +VFTRT L + + G A I G+ SQ R AL+ FK G +L
Sbjct: 238 ISDGNWQQVLVFTRTKHGANNLCKKMSSKGISAAAIHGNKSQGARTKALDGFKKGTLRVL 297
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RGLDIP + VINY+IP S+DY+HR+GRT RAG +G A+SLV+ E +
Sbjct: 298 VATDIAARGLDIPLLPHVINYEIPNISEDYVHRIGRTGRAGASGEAVSLVSADETTYLKD 357
Query: 368 IEKLIGKKLP 377
I+KLIG ++P
Sbjct: 358 IQKLIGMQIP 367
>gi|373109512|ref|ZP_09523790.1| hypothetical protein HMPREF9712_01383 [Myroides odoratimimus CCUG
10230]
gi|423131172|ref|ZP_17118847.1| hypothetical protein HMPREF9714_02247 [Myroides odoratimimus CCUG
12901]
gi|371642665|gb|EHO08224.1| hypothetical protein HMPREF9714_02247 [Myroides odoratimimus CCUG
12901]
gi|371644748|gb|EHO10278.1| hypothetical protein HMPREF9712_01383 [Myroides odoratimimus CCUG
10230]
Length = 370
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 223/367 (60%), Gaps = 5/367 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L L E+ A +G+ T ++IQ +AIP LEGKD+IG AQTG+GKT AFA+PILQ
Sbjct: 3 FKDLALTQEIQTALTKIGYSTATEIQQKAIPPILEGKDVIGTAQTGTGKTAAFAIPILQK 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L ++ + + A +L PTRELAIQ+ + F + + L+ L GGV + Q AL
Sbjct: 63 LHSTPKSTKGIRAL---ILVPTRELAIQVKDSFLDYSTELPLKTVTLFGGVPLPPQVRAL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ P I+VATPGRL+D L N K L L+ LVLDEAD++L+ F L +IL +P R
Sbjct: 120 KQHPEIIVATPGRLLD-LINQKIVKLSNLEILVLDEADQMLDMGFIHDLKKILKFVPTKR 178
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q+ FSATM K++++ R + PVKIE A++ T T++QQ + K K L IL
Sbjct: 179 QSLFFSATMPKEIEQFARTIVYKPVKIEVAAEVITATTIEQQVYYTEKKDKKTLLHTILK 238
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E + ST+VFTRT L L+ + A+ I G+ SQS R+ AL+ FK + NILI
Sbjct: 239 E-NTESTLVFTRTKYEANNLVKYLQKVNMVAMAIHGNKSQSARVKALDDFKNKKINILIA 297
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VINYDIP + Y+HR+GRT RAG GVA+ + + I+
Sbjct: 298 TDIAARGIDISKLPFVINYDIPDKPETYVHRIGRTGRAGVQGVAMCFCTPEQRKELKDIQ 357
Query: 370 KLIGKKL 376
+ G K+
Sbjct: 358 RFTGIKM 364
>gi|237745550|ref|ZP_04576030.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
gi|229376901|gb|EEO26992.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
Length = 470
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/381 (42%), Positives = 232/381 (60%), Gaps = 7/381 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F + GL E+++A +++G+ +P+ IQ++AIP LEGKD++G AQTG+GKT ++LP+LQ+
Sbjct: 17 FGDFGLASEILKALDDLGYSSPTPIQSQAIPVILEGKDVMGAAQTGTGKTAGYSLPVLQS 76
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LL A N PA A +L PTRELA Q+ E SLR AV+ GGVDM QT
Sbjct: 77 LLYYA-NASMSPARHPVRALILVPTRELADQVYEDVRKYAKYTSLRTAVVFGGVDMSGQT 135
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L I++ATPGRL+DH+ K +LG LVLDEADR+L+ F L I+N++P
Sbjct: 136 GILRAGAEILIATPGRLLDHIQQ-KNVNLGQTGILVLDEADRMLDMGFLPDLQRIVNLLP 194
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQ-YRFVPAKYKDCYLV 245
+ RQ LFSAT + +++KL + L PV +E A + +T D + Q YR A D +
Sbjct: 195 KKRQNLLFSATFSSEIRKLANSFLDRPVSVEVARQNATADNVTQTVYRIDEADKNDA-VE 253
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
Y+L ++F+ T LA L G +A I G +Q++R+ AL+ FK G
Sbjct: 254 YLLRLHKREQVLIFSNTKAGASRLARQLEKKGLKAAAIHGDKTQAERMAALDAFKEGNIT 313
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGL I + VIN+D+P ++DY+HR+GRT RAG +G AISL + + +
Sbjct: 314 VLVATDVAARGLHIEELPCVINFDLPFVAEDYVHRIGRTGRAGASGEAISLCSAKDEKLL 373
Query: 366 LQIEKLIGKKLPEFPAEEEEV 386
+IEKLI +KLP + E+
Sbjct: 374 NEIEKLIKRKLPVHSIPDPEI 394
>gi|291000284|ref|XP_002682709.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
gi|284096337|gb|EFC49965.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
Length = 955
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 235/420 (55%), Gaps = 30/420 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ L E + P+ IQ + IP L GK++IG++QTGSGKT AFALPI+Q
Sbjct: 137 SFTDLGISSWLEEHLSKLQINMPTVIQEKCIPPTLAGKNVIGMSQTGSGKTAAFALPIIQ 196
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + +A +++P RELAIQI + FE L + +R A+LVGG+D ++Q
Sbjct: 197 NL------AKDMYGIYALIITPARELAIQIKQHFEILAGDLPIRVALLVGGMDYLKQAHL 250
Query: 129 LGKRPHIVVATPGRLMDHLT--NTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L PHIVV TPGR+ D + N G+ +KYLV DEADR+ + D+ LD IL+V
Sbjct: 251 LDSSPHIVVGTPGRIEDAIRTFNNDGY-FKKIKYLVFDEADRIFSMDYSLDLDRILSVSN 309
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKI-----------EAASKYSTVDTLKQQYRFV 235
RQT L+SATM +VKKL + + N K +A + D L Q Y F+
Sbjct: 310 PKRQTLLYSATMNNQVKKLAKMAMSNSGKTKEEREQSLYIYDACKLFQLADNLSQYYLFM 369
Query: 236 PAKYKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
P KD Y V ++ + +S ++VF L+ R LG + SQ +R
Sbjct: 370 PEHVKDAYFVQLINSLPDNSISIVFFSDITQCELMNQTCRLLGISCDSLHASKSQKERFA 429
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
L F+ L CTDVA+RGLDIP+V VINYD+P + Y+HRVGRTARAGR GV I
Sbjct: 430 VLKYFRKRRLKFLFCTDVANRGLDIPAVGYVINYDLPDTTDKYVHRVGRTARAGRLGVCI 489
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFP------AEEEEVLLLLERVTEAKRISQMTIKDSG 408
SL++Q+E++ IE ++ ++ AE EE LL V E K +++T+ DSG
Sbjct: 490 SLISQFEVKRIKAIESDTDVQMAKYEPFDEEQAESEEHLL---SVAEQKCKAKITLLDSG 546
>gi|153809380|ref|ZP_01962048.1| hypothetical protein BACCAC_03694 [Bacteroides caccae ATCC 43185]
gi|423221053|ref|ZP_17207547.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
gi|149127966|gb|EDM19188.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392622292|gb|EIY16424.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
Length = 375
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 224/368 (60%), Gaps = 1/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL + + +++A + G+ P+ IQ +AIP AL +D++G AQTG+GKT +FA+PI+Q
Sbjct: 2 TFKELNITEPILKAIKEKGYTVPTPIQEKAIPAALAKRDILGCAQTGTGKTASFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L +++ A +L+PTRELA+QISE + +R V+ GGV+ Q
Sbjct: 62 HLQVVSKESVKRQGIKALILTPTRELALQISECIDDYSKYTRVRHGVIFGGVNQRPQVDM 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L N L T++Y VLDEADR+L+ F + IL +P+
Sbjct: 122 LRKGIDILVATPGRLLD-LMNQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKLPKE 180
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT FSATM + L ++ LKNPVKI K STVD++ Q FV K K L+ IL
Sbjct: 181 KQTLFFSATMPDTIVTLTKSLLKNPVKIYITPKSSTVDSINQVVYFVEKKEKSQLLISIL 240
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S ++F+RT + +L G + I G+ SQ+ R AL FK+G+ +++
Sbjct: 241 QKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMV 300
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRG+DI + MVINYD+P + Y+HR+GRT RAG TG A++ +Q E + I
Sbjct: 301 ATDIASRGIDISELPMVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDI 360
Query: 369 EKLIGKKL 376
+KL GKKL
Sbjct: 361 QKLTGKKL 368
>gi|323304640|gb|EGA58403.1| Dbp8p [Saccharomyces cerevisiae FostersB]
Length = 412
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/407 (41%), Positives = 243/407 (59%), Gaps = 23/407 (5%)
Query: 31 PSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSP 90
P+ IQ IP LEG+D IG A+TGSGKT AFA P+L E F VL+P
Sbjct: 6 PTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTKWSEDPS------GMFGVVLTP 59
Query: 91 TRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNT 150
TRELA+QI+EQF ALGS +++R +V+VGG ++QQ L L ++PH ++ATPGRL H+ ++
Sbjct: 60 TRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSS 119
Query: 151 KGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKL 205
++G L KYLVLDEAD LL F L ++ +P RQT LF+AT+T +VK L
Sbjct: 120 GDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSL 179
Query: 206 QRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTM 257
Q A + K P+ ++E+ + TLK +Y VP K+ YL +LT E + +
Sbjct: 180 QNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAI 239
Query: 258 VFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGL 317
+F +L L+ L R + M Q +R +L++F+A ILI TDVASRGL
Sbjct: 240 IFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDVASRGL 299
Query: 318 DIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 377
DIP+V++V+NYDIP++ +IHR GRTARAGR G AIS V Q ++ IE I KK+
Sbjct: 300 DIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKKMT 359
Query: 378 EFPAEEEEVLL--LLERVTEAKRISQMTIK--DSGNKRRRKGGDEDD 420
E + ++ L +VT+AKR S M ++ + G ++R++ ++D
Sbjct: 360 ETNKVHDTAVIRKALTKVTKAKRESLMAMQKENFGERKRQQKKKQND 406
>gi|134093720|ref|YP_001098795.1| ATP-dependent RNA helicase [Herminiimonas arsenicoxydans]
gi|133737623|emb|CAL60666.1| ATP-dependent RNA helicase [Herminiimonas arsenicoxydans]
Length = 502
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 229/376 (60%), Gaps = 7/376 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++ GL E+++A + G+ P+ IQAEAIP L+G D++G AQTG+GKT F+LPI+Q
Sbjct: 25 FQDFGLAPEILKALNDQGYVHPTPIQAEAIPVVLKGMDVMGAAQTGTGKTAGFSLPIIQL 84
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L+ A N PA A +L+PTRELA Q++ +A LR V+ GG+DM QT
Sbjct: 85 LMAHA-NSSASPARHPVRALILTPTRELADQVAANVKAYSRHTPLRSLVVFGGMDMTPQT 143
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL IV+ATPGRL+DH+ K +L + LV+DEADR+L+ F L I+N++P
Sbjct: 144 AALRGGVEIVIATPGRLLDHVQQ-KTINLSQTQILVMDEADRMLDMGFLPDLQRIINLLP 202
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ +FSAT + ++KKL LK+PV IE A +T + + Q V + K + +
Sbjct: 203 KQRQNLMFSATFSPEIKKLAATFLKDPVTIEVARSNATAENVTQIIYKVEEEAKRDAVSF 262
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
I+ E +VF+ T LA L + G +A I G SQS+R+ AL +FK G +
Sbjct: 263 IIRERGLKQVIVFSNTKIGASRLARQLESEGVKASAIHGDKSQSERMQALEQFKNGTIEV 322
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G AISL + + +
Sbjct: 323 LVATDVAARGLDIAELPCVINFDLPYNAEDYVHRIGRTGRAGASGDAISLFSDKDARLLV 382
Query: 367 QIEKLIGKKLPEFPAE 382
IEK+I K PAE
Sbjct: 383 DIEKMIKHKF--VPAE 396
>gi|71908923|ref|YP_286510.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal, partial
[Dechloromonas aromatica RCB]
gi|71848544|gb|AAZ48040.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Dechloromonas aromatica RCB]
Length = 507
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/381 (43%), Positives = 229/381 (60%), Gaps = 10/381 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LGL EL+ A + G+ P+ IQA+AIP + GKD++G AQTG+GKT AF LPILQ
Sbjct: 24 TFADLGLAPELLRAVLDEGYTKPTPIQAQAIPLVISGKDIMGGAQTGTGKTAAFTLPILQ 83
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L A + + PA A +L+PTRELA+Q+ E + +R GGVD+ Q
Sbjct: 84 RILPFASSSPS-PAKHPVRALILAPTRELAMQVFESVKTYSKHTPIRAMCAYGGVDIRPQ 142
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L K I+VATPGRL+DH+ N K S +++ LVLDEADR+L+ F + ILN++
Sbjct: 143 IAELKKGVEILVATPGRLLDHVEN-KSVSFNSVQALVLDEADRMLDMGFVPDVTRILNML 201
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ+ LFSAT ++++KKL LK+P+ IE A + DT+ + V K L
Sbjct: 202 PAQRQSLLFSATFSEEIKKLADTMLKSPILIEVARRNQVSDTITHRVHPVSEYGKRGLLT 261
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L +VF RT L L+ G +A I G SQ +R+ AL FK GE +
Sbjct: 262 KLLKSGEIRQCIVFCRTKQGCSRLTRELQRAGIKADAIHGDKSQLERIKALEAFKGGETD 321
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
LI TDVA+RGLD+ + VINY++P +DY+HR+GRT RAG+ G AISLV+ +E+ +
Sbjct: 322 ALIATDVAARGLDVDDLPYVINYELPHTPEDYVHRIGRTGRAGKKGNAISLVSAHEVCYL 381
Query: 366 LQIEKLIGKKLPEFPAEEEEV 386
+ IEKLI + P E+ EV
Sbjct: 382 VDIEKLIKR-----PIEQVEV 397
>gi|359795873|ref|ZP_09298486.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
gi|359366192|gb|EHK67876.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
Length = 466
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 227/362 (62%), Gaps = 5/362 (1%)
Query: 19 LVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQR 78
L+++ G+ TP+ IQA+AIP +EG+D++G AQTG+GKT AF LPIL L+ +A N
Sbjct: 5 LLQSIAETGYTTPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTS 63
Query: 79 TVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHI 135
PA A +L+PTRELA Q+ E + LR AV+ GGVD+ Q AL + +
Sbjct: 64 ASPARHPVRALILTPTRELADQVYESVKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEV 123
Query: 136 VVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFS 195
+VATPGRL+DH+ K +L + LVLDEADR+L+ F L+ I+ ++P RQ LFS
Sbjct: 124 LVATPGRLLDHVEQ-KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFS 182
Query: 196 ATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASS 255
AT + +++KL R+ L +PV+IE A++ +T T+ Q + + K +V+++
Sbjct: 183 ATFSNEIRKLGRSYLNHPVEIEVAARNATATTITQIAYKMTSDAKRAAVVHLVKSRGLKQ 242
Query: 256 TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASR 315
+VF+ T T LA L G +A I G +Q+ R+ AL FKAGE +L+ TDVA+R
Sbjct: 243 VIVFSNTKIGTARLARDLERDGVKAESIHGDKTQADRMKALEAFKAGELEVLVATDVAAR 302
Query: 316 GLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKK 375
GLD+ V VINYD+P NS+DY+HR+GRT RAG +G AI+L E + L IEKLI ++
Sbjct: 303 GLDVAGVPCVINYDLPYNSEDYVHRIGRTGRAGASGEAIALFTADEERYLLDIEKLIKRE 362
Query: 376 LP 377
+P
Sbjct: 363 VP 364
>gi|302916935|ref|XP_003052278.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733217|gb|EEU46565.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 545
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 186/432 (43%), Positives = 263/432 (60%), Gaps = 36/432 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L +R LV++ N+ K P+ IQ IP L+G+D IG ++TGSGKT AFA+PILQ
Sbjct: 115 TFSALNVRPWLVQSLGNMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQ 174
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ A FA VL+PTRELA+QI EQF+A+ S SL+ ++ GG DM Q +
Sbjct: 175 KWADDPT------AIFAVVLTPTRELALQIYEQFKAISSPQSLKAILITGGSDMRAQAIE 228
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSL----DE 180
LGKRPH+V+ATPGRL DH+ T G L +KY+VLDEADRLLN S+ ++
Sbjct: 229 LGKRPHVVIATPGRLADHV-RTSGEDTICGLRRVKYVVLDEADRLLNATGPGSMLPDVEQ 287
Query: 181 ILNVIPRM--RQTYLFSATMTKKVKKLQRACLK---NPVKI-EAASKYSTVD-TLKQQYR 233
L+V+P RQT LF+AT+T +V+ L+ +K PV + E ++ + TL Q Y
Sbjct: 288 CLSVLPPATERQTLLFTATITPEVRALKDMPIKPGKQPVFVCEVDTQTLAIPATLNQMYI 347
Query: 234 FVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +K+ YL V++LTE + T++ F L +LR L R + + Q +
Sbjct: 348 KVPVTHKEHYLHVFLLTEENVDKTIILFCNRTSTADYLHHLLRLLEHRVTSLHSKLPQRQ 407
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R+ L +F+A IL+ TDVA+RGLDIP V +VINYD+P + DYIHRVGRTARAGR G
Sbjct: 408 RIDNLARFRASAARILVATDVAARGLDIPEVSLVINYDLPRDPDDYIHRVGRTARAGRKG 467
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-------LLERVTEAKRISQMTI 404
A+S + Q ++E L IEK +G+++ + EEE V L +L+ V+E KR + + +
Sbjct: 468 EAVSFIGQRDVELALTIEKRVGREMESW--EEEGVNLETRVVRDVLKVVSEKKREALLEV 525
Query: 405 KDS---GNKRRR 413
+++ G KR+R
Sbjct: 526 EENREVGGKRKR 537
>gi|121705654|ref|XP_001271090.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034080|sp|A1CKJ0.1|DBP8_ASPCL RecName: Full=ATP-dependent RNA helicase dbp8
gi|119399236|gb|EAW09664.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 523
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 264/449 (58%), Gaps = 35/449 (7%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+E +F L + LV + + + P+ IQ IP L GKD IG ++TGSGKT AF++
Sbjct: 90 EEASSFSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILNGKDCIGGSRTGSGKTIAFSV 149
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
P+LQ + AE+ F +L+PTRELA+QI EQ +A+ + S++ ++ GG DM
Sbjct: 150 PMLQ---KWAEDPL---GIFGLILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRS 203
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEI 181
Q LAL RPH+VVATPGRL DH+ ++ ++ LK +VLDEADRLL+ L ++
Sbjct: 204 QALALAGRPHVVVATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRLLSSGPGSMLPDV 263
Query: 182 ---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQ 230
L+ +P RQT LF+AT+T +V+ L+ RA K PV +I + S+ + TLKQ
Sbjct: 264 ETCLSALPPSSERQTLLFTATVTPEVRALKNMPRAANKPPVFVTEISSESQGTVPPTLKQ 323
Query: 231 QYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR---LLALMLRNLGQRAIPISGHM 287
Y VP +++ +L ++L +ST C+ T+ LL MLR L R + +
Sbjct: 324 TYLKVPLTHREAFL-HVLLSTEGNSTKPAIIFCNHTKTADLLERMLRRLSHRVTSLHSLL 382
Query: 288 SQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARA 347
QS+R L +F+A IL+ TDVASRGLDIPSV +V+NYD+P N DY+HRVGRTARA
Sbjct: 383 PQSERNANLARFRASAARILVATDVASRGLDIPSVSLVVNYDVPRNPDDYVHRVGRTARA 442
Query: 348 GRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
GR+G +++LV Q +++ L IE +G+++ E+ EE V + E + + +K+
Sbjct: 443 GRSGESVTLVGQRDVQLVLAIEARVGRQMEEW--SEEGVSI------EGRVVRTGVLKEV 494
Query: 408 GNKRRRKGGDEDDDIGRQ-FGINKKKLSK 435
G +R G+ D+ GR G + KL K
Sbjct: 495 GEAKREASGEIDE--GRDVLGRKRNKLKK 521
>gi|443316249|ref|ZP_21045701.1| DNA/RNA helicase, superfamily II [Leptolyngbya sp. PCC 6406]
gi|442784157|gb|ELR94045.1| DNA/RNA helicase, superfamily II [Leptolyngbya sp. PCC 6406]
Length = 438
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 222/370 (60%), Gaps = 2/370 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ LGL ++ A E+ G+ TP+ IQA+AIP LEGKDL+ AQTG+GKT F LPIL
Sbjct: 2 SFETLGLAAGILRAVEDQGYSTPTPIQAKAIPLVLEGKDLMASAQTGTGKTAGFTLPILH 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L Q P A VL+PTRELA Q++E G + LR AV+ GGV + Q
Sbjct: 62 KLASAGRGQGRRPPR-ALVLTPTRELAAQVAESIATYGKYVPLRTAVVFGGVKIQPQIHK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + ++VATPGRL+DH+ + L ++ LVLDEADR+L+ F + +LN +P
Sbjct: 121 LQRGVDVLVATPGRLLDHV-GQRTVDLSQVEVLVLDEADRMLDMGFIHDIRRLLNELPAE 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT +FSAT + ++KKL L++PV +E A++ ST D + Q V + K L Y++
Sbjct: 180 RQTLMFSATFSNEIKKLADDILRDPVLVEVAARNSTADKISQVVHPVDRQRKRELLSYMI 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + +VFTRT LA L G + I G+ SQ R AL FK G +L+
Sbjct: 240 GQHNWQQVLVFTRTKHGANRLAEQLERDGLKTAAIHGNKSQGARTRALQDFKKGAVRVLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+++P S+DY+HR+GRT RAG TG A+SLV+ E I
Sbjct: 300 ATDIAARGLDIDHLPHVVNFELPNVSEDYVHRIGRTGRAGNTGQAVSLVSSEEYPLLRSI 359
Query: 369 EKLIGKKLPE 378
E+L+ + LP+
Sbjct: 360 ERLLKQDLPK 369
>gi|299532061|ref|ZP_07045456.1| hypothetical protein CTS44_14723 [Comamonas testosteroni S44]
gi|298719976|gb|EFI60938.1| hypothetical protein CTS44_14723 [Comamonas testosteroni S44]
Length = 464
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 226/370 (61%), Gaps = 5/370 (1%)
Query: 15 LRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIA 74
+ + L A ++G+++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+LQ L+
Sbjct: 1 MAEPLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQRLMR-H 59
Query: 75 ENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGK 131
EN PA A VL PTRELA Q+++Q LR V+ GG+DM QT+ L K
Sbjct: 60 ENASASPARHPVRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQTIELKK 119
Query: 132 RPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQT 191
++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +P+ R T
Sbjct: 120 GVEVLVATPGRLLDHI-EAKNVVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPKSRTT 178
Query: 192 YLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEV 251
LFSAT + ++K+L + L++PV IE A T T++Q++ V K + +L E
Sbjct: 179 LLFSATFSPEIKRLAGSYLQDPVTIEVARPNETASTVEQRFYKVTDDDKRYAIRSVLKER 238
Query: 252 SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTD 311
+F+ + L L G RA + G SQ +RL AL FKAGE ++L+CTD
Sbjct: 239 DIRQAFIFSNSKLGCARLTRALERDGLRAAALHGDKSQDERLKALEAFKAGEVDLLVCTD 298
Query: 312 VASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKL 371
VA+RGLDI V V NYD+P N++DY+HR+GRT RAG +G+A++LV ++ IEKL
Sbjct: 299 VAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGLAVTLVTDHDSRNVADIEKL 358
Query: 372 IGKKLPEFPA 381
KK+ PA
Sbjct: 359 TKKKIEVEPA 368
>gi|295675961|ref|YP_003604485.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295435804|gb|ADG14974.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 484
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 229/372 (61%), Gaps = 5/372 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+TF + GL ++++A + G+ +P+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+
Sbjct: 11 ETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVLAGRDVMGAAQTGTGKTASFSLPII 70
Query: 68 QALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
Q LL A N PA A +L+PTRELA Q++ +A +LR AV+ GGVDM
Sbjct: 71 QRLLPQA-NTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNP 129
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN+
Sbjct: 130 QSDQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNL 188
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +
Sbjct: 189 LPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEGDKTGAV 248
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
V ++ E +VF + LA L G A I G SQS+R+ AL+ FK GE
Sbjct: 249 VQLIRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQSERMQALDAFKRGEV 308
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 309 EALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQ 368
Query: 365 YLQIEKLIGKKL 376
IEKLI + L
Sbjct: 369 LADIEKLIKRPL 380
>gi|254259821|ref|ZP_04950875.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1710a]
gi|254218510|gb|EET07894.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1710a]
Length = 486
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|223982748|ref|ZP_03632977.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
gi|223965288|gb|EEF69571.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
Length = 424
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 232/369 (62%), Gaps = 5/369 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL + +++ C+ +G+ TP+KIQ +AIP LEG+DL+GLAQTG+GKT AFALPIL
Sbjct: 3 FNELPIHPSILKNCQRMGYTTPTKIQQKAIPPVLEGRDLLGLAQTGTGKTAAFALPILDQ 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L++ + Q+ A A VL+PTRELAIQI + F+ G G+ L+ V+ GGV Q L
Sbjct: 63 LMK--QPQKGKRAIKALVLTPTRELAIQIVDNFQLYGQGLPLKTVVIFGGVKQGAQVDQL 120
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K I++ATPGRL+D L + L ++ VLDEADR+L+ F + + ++ +
Sbjct: 121 KKGADILIATPGRLLD-LVGQRLLDLSQVEIFVLDEADRMLDMGFIHDVKRVSALLVNKK 179
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM K++ L + LKNPV++EA + ++ ++Q+ +V K+ L+ +L
Sbjct: 180 QTLLFSATMPKEIAGLAASLLKNPVRVEATPVSTPIEKIEQRVYYVEKSEKNDLLLRVLK 239
Query: 250 EVSASSTMVFTRT-CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +S +VFTRT +A R++ + + Q A+ I G+ SQ+ R AL FK E +L+
Sbjct: 240 KEEVTSALVFTRTKHEADRVVRFLTKGHVQ-AMAIHGNKSQNARQKALAAFKNHEIQVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + VINY+IP S+ Y+HR+GRTARAG+ G+AIS E + I
Sbjct: 299 ATDIAARGIDIEKLSHVINYNIPNISETYVHRIGRTARAGQEGIAISFCQNDERAYLKDI 358
Query: 369 EKLIGKKLP 377
EKLI +P
Sbjct: 359 EKLIRYTIP 367
>gi|167823349|ref|ZP_02454820.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 9]
gi|226195327|ref|ZP_03790916.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pakistan 9]
gi|225932529|gb|EEH28527.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pakistan 9]
Length = 478
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|255038837|ref|YP_003089458.1| DEAD/DEAH box helicase [Dyadobacter fermentans DSM 18053]
gi|254951593|gb|ACT96293.1| DEAD/DEAH box helicase domain protein [Dyadobacter fermentans DSM
18053]
Length = 383
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 223/369 (60%), Gaps = 1/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF++L L + + +A + G+ TP+ IQ++AIP LE KDL+G AQTG+GKT AFA+P+LQ
Sbjct: 2 TFQDLKLIEPIKKALQEEGYTTPTPIQSKAIPVILETKDLLGCAQTGTGKTAAFAIPMLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + A +L+PTRELAIQI E F A G +R V+ GGV QT A
Sbjct: 62 LLHENPVGKFERSRIRALILTPTRELAIQIGESFAAYGRYTRVRHTVIFGGVGQKPQTDA 121
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K +++ATPGRL+D L N L L++ VLDEADR+L+ F + +++ ++P
Sbjct: 122 LAKGVDVLIATPGRLLD-LINQGFIKLNQLEFFVLDEADRMLDMGFVHDVKKVIKLLPGK 180
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM + L L+NPVK+E ST DT++Q FV K+ L++IL
Sbjct: 181 RQSLFFSATMPPAIVTLAGTILRNPVKVEVTPVSSTADTIRQSVFFVDKSNKNSLLLHIL 240
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S ++ +VFTRT + +LR G + I G+ SQ+ R AL FK +L+
Sbjct: 241 QDESIATALVFTRTKHGADKVVKVLRKAGVTSEAIHGNKSQTARQNALKNFKNQTTRVLV 300
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY+IP + Y+HR+GRT RAG G+A+S ++ E + I
Sbjct: 301 ATDIAARGIDVDDLTHVINYEIPNIPETYVHRIGRTGRAGAKGIALSFCDKEEKPYLKDI 360
Query: 369 EKLIGKKLP 377
KLI K +P
Sbjct: 361 HKLIAKNIP 369
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/432 (40%), Positives = 244/432 (56%), Gaps = 10/432 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL L L++A + G+ PS IQ +AIP+ L G+DL+G AQTG+GKT AFALPI+Q
Sbjct: 3 FDELQLSPLLLKALDQKGYIKPSPIQEQAIPYVLNGQDLLGCAQTGTGKTAAFALPIIQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L+E +N++ A +L+PTRELA+QI E E G+G + AV+ GGV Q +L
Sbjct: 63 LMERPKNRQKKKPVRALILTPTRELALQIHENIEEYGAGTPINSAVIFGGVSAKPQIQSL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I+VATPGRL+D L L ++ VLDEADR+L+ F + ++ ++P+ R
Sbjct: 123 RRGIDILVATPGRLLD-LIGQHEIDLSFVEIFVLDEADRMLDMGFIHDVKRVITLLPKKR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +++ L L NPVK+E STVD ++ +V K LV++L
Sbjct: 182 QTLLFSATMPDEIQALAAKLLHNPVKVEVTPVSSTVDLIETSLYYVDKANKWPLLVHLLE 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
SST+VFTRT A L G A I G SQ R AL+ FK+G +L+
Sbjct: 242 HEDVSSTLVFTRTKHGADRGAKYLNKSGITAAAIHGDKSQGARQTALSNFKSGRLRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VIN+D+P + Y+HR+GRT RAG G AIS + E + IE
Sbjct: 302 TDIAARGIDIEELSCVINFDLPNVPETYVHRIGRTGRAGLGGRAISFSDIEEKAYVKDIE 361
Query: 370 KLIGKKLP-----EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGR 424
KL GK + +P E E+ ER + R ++ K +G+ RR K D D R
Sbjct: 362 KLTGKTIQVIGDHPYPMEVFEIAPKEERNS---RQAKGAGKGAGS-RRAKDSRRDTDSKR 417
Query: 425 QFGINKKKLSKR 436
+ K S+R
Sbjct: 418 ATDSRRAKDSRR 429
>gi|315499118|ref|YP_004087922.1| dead/deah box helicase domain-containing protein [Asticcacaulis
excentricus CB 48]
gi|315417130|gb|ADU13771.1| DEAD/DEAH box helicase domain protein [Asticcacaulis excentricus CB
48]
Length = 605
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 235/386 (60%), Gaps = 8/386 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+LGL L+ E G+ TP+ IQA+AIP L DL+G+AQTG+GKT AFALPIL
Sbjct: 3 TFKDLGLSASLLSTLEKEGYHTPTPIQAQAIPILLNKHDLLGIAQTGTGKTAAFALPILH 62
Query: 69 ALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L + R +PA +C VLSPTRELA QI++ F+A G+ L+ A + GGV Q
Sbjct: 63 HIL----SNRIIPAPRSCRVLVLSPTRELATQIADSFKAYSKGLGLQIATIFGGVKYGPQ 118
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
AL I+VATPGRL+DH+ K L +++LVLDEAD++L+ F K + ++ + +
Sbjct: 119 YKALQGGIDILVATPGRLIDHIEQ-KTIDLKAVEHLVLDEADQMLDMGFIKPIRQVASRL 177
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ FSATM K++ L L NP K+E + +T + + QQ F+ + K L
Sbjct: 178 PAQRQNLFFSATMPKEIAGLANELLTNPKKVEITPEATTAERVTQQVIFIEQQRKRALLS 237
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ + + T++FTRT +A L+ G A I G +QS+R AL FKAG
Sbjct: 238 ELYADEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVR 297
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TD+A+RG+D+ +V VINY++P ++ Y+HR+GRTARAG+ G +I+LV E +
Sbjct: 298 ALVATDIAARGIDVDNVTHVINYELPFVAEAYVHRIGRTARAGKEGHSITLVADDERKLL 357
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLE 391
IE++ +++P + +++ L LL+
Sbjct: 358 KDIERITRQRIPSWDRRKDQALKLLD 383
>gi|240278937|gb|EER42443.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus H143]
Length = 539
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 170/417 (40%), Positives = 253/417 (60%), Gaps = 32/417 (7%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
++ +F LGL LV + + K P+ IQ IP L+G+D IG ++TGSGKT AFA P
Sbjct: 107 DISSFASLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAP 166
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ + AE+ + FA +L+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q
Sbjct: 167 ILQ---KWAEDPFGI---FAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQ 220
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEI- 181
+AL +RPHIV+ATPGRL DH+T++ ++ L + +V DEADRLL L ++
Sbjct: 221 AIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVVVFDEADRLLASGPGSMLPDVE 280
Query: 182 --LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQ 231
L+ +P RQT LF+AT+T +V+ L+ R K P+ ++ +K S TLKQ
Sbjct: 281 TCLSALPPSTARQTLLFTATVTPEVRALKSMPRPANKLPIFVTEVSTENKASIPPTLKQT 340
Query: 232 YRFVPAKYKDCYLVYILTEVSAS--STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQ 289
Y VP +++ +L +++ + S ++F L+ MLR LG R + + Q
Sbjct: 341 YLQVPLTHREAFLHTLISTAANSQKPAIIFCNRTKTADLVERMLRRLGHRVTSLHSLLPQ 400
Query: 290 SKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR 349
S+R L++F+A IL+ TDVA+RGLDIPSV +VIN+D+P N DY+HRVGRTARAGR
Sbjct: 401 SERTANLSRFRASAARILVATDVAARGLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGR 460
Query: 350 TGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
G A++LV Q +++ L IE +G+++ E+ +EE V + +L+ V EAKR
Sbjct: 461 EGEAVTLVGQRDVQLVLAIEDRVGREMVEW--KEEGVSIEGRVVRGGILKEVGEAKR 515
>gi|168183325|ref|ZP_02617989.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
gi|182673470|gb|EDT85431.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
Length = 425
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 246/411 (59%), Gaps = 9/411 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + + A VL+PTRELAIQI+E FE G I+L+ AV+ GGV QT L
Sbjct: 63 LSKDKKANKNPRPIRALVLAPTRELAIQIAESFECYGKYINLKSAVIFGGVSQNPQTKVL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I++ATPGR++D L N K L +++ VLDEADR+L+ + +I++ +P++R
Sbjct: 123 REGVDILIATPGRMLD-LFNQKYIDLRNIEFFVLDEADRMLDMGMIHDVKKIISKLPKIR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L ++L
Sbjct: 182 QNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRALLKHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +L+
Sbjct: 242 DKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E + IE
Sbjct: 302 TDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEETKSLKAIE 361
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
KLI K++P ++ R + + K++ NKR +R+GG+
Sbjct: 362 KLINKEIPVVEDHPYKI-----RHINENEVKKENTKNNYNKRPFSKRQGGN 407
>gi|402467624|gb|EJW02900.1| hypothetical protein EDEG_02724 [Edhazardia aedis USNM 41457]
Length = 403
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 231/392 (58%), Gaps = 13/392 (3%)
Query: 27 GWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC 86
G+ TP+ +Q E IPH L+ K +I LA TGSGKT AFA+PIL +++ T+
Sbjct: 21 GFSTPTNVQKEVIPHVLQKKSVITLANTGSGKTLAFAVPILNDIIKYNTYYHTL------ 74
Query: 87 VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDH 146
+++PTRELA+QI+ FE LG LR L+GGVD +Q + + PHI++ TPGRL
Sbjct: 75 IITPTRELAMQIANVFENLGQNHGLRVVTLIGGVDEKEQKRKIFESPHIIIGTPGRLSLI 134
Query: 147 LTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQ 206
+ K F L+Y VLDE D+LL + + +I N + + +FSATMT ++ L
Sbjct: 135 MQKVKLFD--RLQYFVLDEGDKLLETTYADDIRKISNEVNENKSMLIFSATMTDSLQSLI 192
Query: 207 RACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDAT 266
L +PVK+ + TV L Q+Y F+P KYK+ YL Y++ + + S +VF +C
Sbjct: 193 DLNLIDPVKVVINKTFDTVSKLIQKYVFLPQKYKETYL-YLICQDNLSKKIVFVSSCLGA 251
Query: 267 RLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI 326
+ L + L+N+ + + G + Q +R LN F + +L+ TDVA+RGLDIP V+MVI
Sbjct: 252 QTLKIFLQNMNIDCVALHGKLKQDERCEVLNIFSGKDACVLLATDVAARGLDIPEVEMVI 311
Query: 327 NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 386
NYD+P SK+Y+HRVGRTAR + G+A++ V QY++ + +IE I + + +EE+
Sbjct: 312 NYDLPRTSKEYVHRVGRTARLDKEGLAVNFVTQYDVALFQKIEADIKTSMVLYECDEEKA 371
Query: 387 LLLLERVTEAKRISQMTIKDSG----NKRRRK 414
L +V+ A + + +K+S K RRK
Sbjct: 372 KALFHKVSVAYKTAYDEVKESDMNAKKKHRRK 403
>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
Length = 372
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 225/368 (61%), Gaps = 4/368 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+L + + +++A E G+ +P+ IQ +AIP AL GKD++G AQTG+GKT AFA+PI+Q
Sbjct: 2 TFKDLNITEPILKAIEEKGYTSPTPIQVKAIPAALTGKDILGCAQTGTGKTAAFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E +++ A +L+PTRELA+QISE + +R V+ GGV+ Q
Sbjct: 62 HLQAGKERDKSIKAL---ILTPTRELALQISECIDDYAKYTQVRHGVIFGGVNQRAQVNM 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L N L ++++ VLDEADR+L+ F + +L +P+
Sbjct: 119 LHKGVDILVATPGRLLD-LMNQGYIRLDSVRHFVLDEADRMLDMGFIHDIKRLLPKLPKE 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT FSATM + L + LK PVKI K STVDT++Q FV K K L+ IL
Sbjct: 178 KQTLFFSATMPDTIIALTNSLLKQPVKIAITPKSSTVDTIEQTVYFVEKKEKSKLLISIL 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VF+RT + +L G + I G+ SQ+ R AL FK G+ ++I
Sbjct: 238 HKAEGQSVLVFSRTKHNADRIVRVLSKAGIGSQAIHGNKSQNARQSALENFKTGKIRVMI 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + +VINYD+P + Y+HR+GRT RAG +G A++ +Q E + I
Sbjct: 298 ATDIAARGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNSGTALTFCSQEERKLVSDI 357
Query: 369 EKLIGKKL 376
+KL GKKL
Sbjct: 358 QKLTGKKL 365
>gi|167910130|ref|ZP_02497221.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
112]
Length = 400
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|456062808|ref|YP_007501778.1| DEAD/DEAH box helicase domain-containing protein [beta
proteobacterium CB]
gi|455440105|gb|AGG33043.1| DEAD/DEAH box helicase domain-containing protein [beta
proteobacterium CB]
Length = 472
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 231/375 (61%), Gaps = 9/375 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++ +A G+ TP+ IQA++IPH L G DL+G AQTG+GKT AF LPI+Q
Sbjct: 25 TFADFGLDPKIQKAVSEQGYNTPTPIQAQSIPHVLAGSDLMGAAQTGTGKTAAFVLPIIQ 84
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L A + + PA A VL+PTRELA+Q++E LR AV+ GGVDM +Q
Sbjct: 85 KILRHASSSAS-PARHPIRALVLTPTRELAVQVAENAANYSKHTDLRAAVVYGGVDMKEQ 143
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L I++ATPGRL+DH+ +K +L ++ LVLDEADR+L+ F L I+++I
Sbjct: 144 VAILRGGVEILIATPGRLLDHI-GSKVANLSQVEILVLDEADRMLDMGFLPDLQRIIDLI 202
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT + ++KKL ++ L+ PV +E A + + DT+KQ V + K +V
Sbjct: 203 PAQRQTLLFSATFSPEIKKLAQSYLRTPVTVEVARQNAAADTVKQVVHMVSSADKQRAIV 262
Query: 246 YILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
+L + + ++FT + LA L G +A I G SQ +R L+ FK+
Sbjct: 263 KVLEARTRQGLSRQCIIFTNSRLGCARLARSLERDGIKAGAIHGDKSQGERTLTLDAFKS 322
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G L+ TDVA+RGLDIPS+ VIN+++P N++D+IHR+GRT RAG G AI+LV+ E
Sbjct: 323 GAIEALVATDVAARGLDIPSMPCVINHELPFNAEDFIHRIGRTGRAGSKGDAIALVDASE 382
Query: 362 LEWYLQIEKLIGKKL 376
IEKL+ +KL
Sbjct: 383 KRLLDDIEKLMKRKL 397
>gi|212527694|ref|XP_002144004.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
gi|210073402|gb|EEA27489.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
Length = 538
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 174/416 (41%), Positives = 253/416 (60%), Gaps = 36/416 (8%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF L + LV++ + + P+ IQ IP L+GKD IG ++TGSGKT AFA+PILQ
Sbjct: 109 TFATLNVAPWLVKSLSTMAIRRPTAIQKSCIPEILKGKDCIGGSRTGSGKTIAFAVPILQ 168
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ AE+ V FA VL+PTRELA+QI EQF+A+ + SL+ ++ GG DM Q +A
Sbjct: 169 ---KWAEDPFGV---FAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGTDMRPQAIA 222
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSLDEI--- 181
L +RPH+++ATPGRL DH+ T G L ++ +V+DEADRLL L ++
Sbjct: 223 LSQRPHVIIATPGRLADHI-RTSGEDTIVGLNRVRMVVMDEADRLLTSGQGSMLPDVETC 281
Query: 182 LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYR 233
L+ +P RQT LF+AT+T +V+ L+ R + P+ +I + TLKQ Y
Sbjct: 282 LSALPPSSERQTLLFTATVTPEVRALKSMPRPANRPPIHVTEIGTENHAPIPPTLKQTYL 341
Query: 234 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR---LLALMLRNLGQRAIPISGHMSQS 290
VP +++ +L ++L +ST C+ TR LL +LR L R + + QS
Sbjct: 342 QVPMTHREAFL-HVLLSTERNSTKPAIIFCNRTRTADLLERILRRLSHRVTSLHSLLPQS 400
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
+R L++F+A +L+ TDVASRGLDIP+V +VIN+D+P N DY+HRVGRTARAGRT
Sbjct: 401 ERTANLSRFRASAARLLVATDVASRGLDIPNVSLVINFDVPRNPDDYVHRVGRTARAGRT 460
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
G +++LV Q +++ L IEK +G+++ E+ EEE V + +L+ V EAKR
Sbjct: 461 GESVTLVGQRDVQLVLAIEKRVGRQMIEW--EEEGVSVETRVVKGGILKEVGEAKR 514
>gi|53718749|ref|YP_107735.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei K96243]
gi|53725492|ref|YP_103512.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
gi|67643786|ref|ZP_00442529.1| dead/deah box helicase [Burkholderia mallei GB8 horse 4]
gi|121599991|ref|YP_992380.1| DEAD/DEAH box helicase [Burkholderia mallei SAVP1]
gi|124383787|ref|YP_001026818.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10229]
gi|126449417|ref|YP_001079898.1| DEAD/DEAH box helicase [Burkholderia mallei NCTC 10247]
gi|126454058|ref|YP_001065480.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106a]
gi|134281039|ref|ZP_01767748.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 305]
gi|167893438|ref|ZP_02480840.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 7894]
gi|217419830|ref|ZP_03451336.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 576]
gi|242317719|ref|ZP_04816735.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106b]
gi|386862473|ref|YP_006275422.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026b]
gi|403517911|ref|YP_006652044.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BPC006]
gi|418390012|ref|ZP_12967823.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354a]
gi|418538110|ref|ZP_13103738.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026a]
gi|418541611|ref|ZP_13107086.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258a]
gi|418547854|ref|ZP_13112990.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258b]
gi|418554032|ref|ZP_13118832.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354e]
gi|52209163|emb|CAH35107.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
K96243]
gi|52428915|gb|AAU49508.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
gi|121228801|gb|ABM51319.1| DEAD/DEAH box helicase [Burkholderia mallei SAVP1]
gi|124291807|gb|ABN01076.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10229]
gi|126227700|gb|ABN91240.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106a]
gi|126242287|gb|ABO05380.1| DEAD/DEAH box helicase [Burkholderia mallei NCTC 10247]
gi|134247345|gb|EBA47430.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 305]
gi|217397134|gb|EEC37150.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 576]
gi|238525219|gb|EEP88647.1| dead/deah box helicase [Burkholderia mallei GB8 horse 4]
gi|242140958|gb|EES27360.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106b]
gi|385348870|gb|EIF55466.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026a]
gi|385357533|gb|EIF63583.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258a]
gi|385359528|gb|EIF65484.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258b]
gi|385370979|gb|EIF76201.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354e]
gi|385375790|gb|EIF80532.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354a]
gi|385659601|gb|AFI67024.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026b]
gi|403073554|gb|AFR15134.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BPC006]
Length = 482
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|325090197|gb|EGC43507.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus H88]
Length = 539
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/417 (40%), Positives = 253/417 (60%), Gaps = 32/417 (7%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
++ +F LGL LV + + K P+ IQ IP L+G+D IG ++TGSGKT AFA P
Sbjct: 107 DISSFASLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAP 166
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
ILQ + AE+ + FA +L+PTRELA+QI EQ +A+ + SL+ ++ GG +M Q
Sbjct: 167 ILQ---KWAEDPFGI---FAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQ 220
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEI- 181
+AL +RPHIV+ATPGRL DH+T++ ++ L + +V DEADRLL L ++
Sbjct: 221 AIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVVVFDEADRLLASGPGSMLPDVE 280
Query: 182 --LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQ 231
L+ +P RQT LF+AT+T +V+ L+ R K P+ ++ +K S TLKQ
Sbjct: 281 TCLSTLPPSTARQTLLFTATVTPEVRALKSMPRPANKLPIFVTEVSTENKASIPPTLKQT 340
Query: 232 YRFVPAKYKDCYLVYILTEVSAS--STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQ 289
Y VP +++ +L +++ + S ++F L+ MLR LG R + + Q
Sbjct: 341 YLQVPLTHREAFLHTLISTAANSQKPAIIFCNRTKTADLVERMLRRLGHRVTSLHSLLPQ 400
Query: 290 SKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGR 349
S+R L++F+A IL+ TDVA+RGLDIPSV +VIN+D+P N DY+HRVGRTARAGR
Sbjct: 401 SERTANLSRFRASAARILVATDVAARGLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGR 460
Query: 350 TGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--------LLERVTEAKR 398
G A++LV Q +++ L IE +G+++ E+ +EE V + +L+ V EAKR
Sbjct: 461 EGEAVTLVGQRDVQLVLAIEDRVGREMVEW--KEEGVSIEGRVVRGGILKEVGEAKR 515
>gi|167844897|ref|ZP_02470405.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
B7210]
Length = 399
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|407940452|ref|YP_006856093.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
gi|407898246|gb|AFU47455.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
Length = 490
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/371 (42%), Positives = 226/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G+++ + IQA+AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL+ EN T PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NP+ IE A T T++Q++ K +
Sbjct: 182 PKQRTTLLFSATFSPEIKRLAGSYLQNPITIEVARPNETASTVEQRFYSANDDDKRRAIH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L +F + LA L G + + G SQ +RL AL FK GE +
Sbjct: 242 HVLKTRGIKQAFIFVNSKLGCARLARSLEREGLKTAALHGDKSQDERLKALEAFKKGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++LV+ +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDARLV 361
Query: 366 LQIEKLIGKKL 376
IEKLI KK+
Sbjct: 362 ADIEKLIKKKI 372
>gi|222110266|ref|YP_002552530.1| dead/deah box helicase domain-containing protein [Acidovorax ebreus
TPSY]
gi|221729710|gb|ACM32530.1| DEAD/DEAH box helicase domain protein [Acidovorax ebreus TPSY]
Length = 484
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 230/382 (60%), Gaps = 5/382 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ + L L + L A +G++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+
Sbjct: 2 TQPYSTLALAEPLKRAVAEMGYENMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPL 61
Query: 67 LQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LQ LL+ EN PA A VL PTRELA Q+++Q LR V+ GG+DM
Sbjct: 62 LQRLLK-HENSSASPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMK 120
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
QT+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+
Sbjct: 121 PQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILS 179
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ R T LFSAT + ++K+L + L++P+ IE A T T++Q++ V K
Sbjct: 180 YLPKQRTTLLFSATFSPEIKRLAGSYLQDPITIEVARPNETASTVEQRFFAVDGDDKRRA 239
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+ ++L E +F + LA L G + + G SQ +RL AL+ FK+GE
Sbjct: 240 IRHVLNERGLKQAFIFVNSKLGCARLARSLERDGLKTAALHGDKSQDERLKALDAFKSGE 299
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
++L+CTDVA+RGLDI V V NYD+P N++DY+HR+GRT RAG +G+A++L +
Sbjct: 300 VDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGLAVTLAASSDTR 359
Query: 364 WYLQIEKLIGKKLPEFPAEEEE 385
IEKLI KK+ P E +E
Sbjct: 360 LVADIEKLIKKKIELEPLELQE 381
>gi|126442203|ref|YP_001058242.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 668]
gi|167901897|ref|ZP_02489102.1| DEAD/DEAH box helicase [Burkholderia pseudomallei NCTC 13177]
gi|237811490|ref|YP_002895941.1| dead/deah box helicase [Burkholderia pseudomallei MSHR346]
gi|126221696|gb|ABN85202.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 668]
gi|237505268|gb|ACQ97586.1| dead/deah box helicase [Burkholderia pseudomallei MSHR346]
Length = 481
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|167918160|ref|ZP_02505251.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BCC215]
Length = 414
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|167737747|ref|ZP_02410521.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
14]
Length = 409
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQAIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|350544972|ref|ZP_08914491.1| ATP-dependent RNA helicase Bcep18194_A5658 [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527233|emb|CCD38619.1| ATP-dependent RNA helicase Bcep18194_A5658 [Candidatus Burkholderia
kirkii UZHbot1]
Length = 493
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 248/433 (57%), Gaps = 13/433 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 18 TFDQFGLSSDILKAVRESGYTTPTPIQAQAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 77
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ + LR V+ GGVDM Q
Sbjct: 78 RLLPTA-NTSASPARHPVRALMLTPTRELADQVAANVQTYSKHTPLRSTVVFGGVDMNPQ 136
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ AL + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 137 SDALRRGVEILIATPGRLLDHVQQ-KTVNLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 195
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ QT LFSAT + ++KKL L+NP IE A ST ++Q V K +
Sbjct: 196 PKECQTLLFSATFSAEIKKLASTYLRNPQTIEVARSNSTNANVRQIVYEVHESDKSGAVA 255
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E +VF + LA +L G A I G +QS+R+ AL+ FK GE
Sbjct: 256 QLIRERKLKQVIVFCNSKIGASRLARVLERDGIVATAIHGDRTQSERMQALDAFKRGEIE 315
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 316 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSANERKQL 375
Query: 366 LQIEKLIGKKLPEFPAE-------EEEVLLLLERVTEAKR-ISQMTIKDSGNKRRRKGGD 417
IEKLI + L P E E ER ++R + + ++ RRR G
Sbjct: 376 ADIEKLIKRPLEVDPLEVTTRARREGPGSRRDERFGRSERGKHRHSSREEAGSRRRAMGT 435
Query: 418 EDDDIGRQFGINK 430
D GRQ I++
Sbjct: 436 HDRPRGRQQPIDE 448
>gi|167580312|ref|ZP_02373186.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis TXDOH]
gi|167618435|ref|ZP_02387066.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis Bt4]
gi|257139776|ref|ZP_05588038.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
Length = 481
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E++ A G+ TP+ IQA AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|107103467|ref|ZP_01367385.1| hypothetical protein PaerPA_01004537 [Pseudomonas aeruginosa PACS2]
Length = 449
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWHQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|167814905|ref|ZP_02446585.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
91]
Length = 411
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|167718732|ref|ZP_02401968.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
DM98]
Length = 409
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|145588789|ref|YP_001155386.1| DEAD/DEAH box helicase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047195|gb|ABP33822.1| DEAD/DEAH box helicase domain protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/382 (43%), Positives = 233/382 (60%), Gaps = 9/382 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++ +A G+ P+ IQA++IPH L G DL+G AQTG+GKT AF LPI+Q
Sbjct: 29 TFADFGLDPKIQKAVAEQGYSIPTPIQAQSIPHVLAGSDLMGAAQTGTGKTAAFVLPIIQ 88
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
+L A N + PA A VL+PTRELA+Q++E + LR AV+ GGVDM +Q
Sbjct: 89 QILRHASNSAS-PARHPIRALVLTPTRELAVQVAENAASYSKHTDLRAAVVYGGVDMKEQ 147
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L I++ATPGRL+DH+ +K +L ++ LVLDEADR+L+ F L I+++I
Sbjct: 148 VAILRNGVEILIATPGRLLDHI-GSKVANLSQVEILVLDEADRMLDMGFLPDLQRIIDLI 206
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT + ++KKL ++ L+ PV +E A + + DT+KQ V + K +V
Sbjct: 207 PAQRQTLLFSATFSPEIKKLAQSYLRTPVTVEVARQNAAADTVKQVVHMVSSGDKQRAIV 266
Query: 246 YIL---TEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
+L T + S ++FT + LA L G +A I G SQ +R L+ FK+
Sbjct: 267 KVLEARTRLGLSRQCIIFTNSRLGCAKLARALERDGIKAGAIHGDKSQGERTLTLDAFKS 326
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G L+ TDVA+RGLDIP + VIN+++P N++D+IHR+GRT RAG G AI+LV+ E
Sbjct: 327 GAIEALVATDVAARGLDIPDMPCVINHELPYNAEDFIHRIGRTGRAGSKGDAIALVDASE 386
Query: 362 LEWYLQIEKLIGKKLPEFPAEE 383
IEKL+ +KL P E
Sbjct: 387 KRLLDDIEKLMKRKLDVKPLPE 408
>gi|121593545|ref|YP_985441.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
JS42]
gi|120605625|gb|ABM41365.1| DEAD/DEAH box helicase domain protein [Acidovorax sp. JS42]
Length = 484
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 229/382 (59%), Gaps = 5/382 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ + L L + L A +G++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+
Sbjct: 2 TQPYSTLALAEPLKRAVAEMGYENMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPL 61
Query: 67 LQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LQ LL+ EN PA A VL PTRELA Q+++Q LR V+ GG+DM
Sbjct: 62 LQRLLK-HENSSASPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMK 120
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
QT+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+
Sbjct: 121 PQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILS 179
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ R T LFSAT + ++K+L + L++P+ IE A T T++Q++ V K
Sbjct: 180 YLPKQRTTLLFSATFSPEIKRLAGSYLQDPITIEVARPNETASTVEQRFFAVDGDDKRRA 239
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+ ++L E +F + LA L G + + G SQ +RL AL FK+GE
Sbjct: 240 IRHVLNERGLKQAFIFVNSKLGCARLARSLERDGLKTAALHGDKSQDERLKALEAFKSGE 299
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
++L+CTDVA+RGLDI V V NYD+P N++DY+HR+GRT RAG +G+A++L +
Sbjct: 300 VDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGLAVTLAASSDTR 359
Query: 364 WYLQIEKLIGKKLPEFPAEEEE 385
IEKLI KK+ P E +E
Sbjct: 360 LVADIEKLIKKKIELEPLELQE 381
>gi|451987161|ref|ZP_21935321.1| ATP-dependent RNA helicase PA3950 [Pseudomonas aeruginosa 18A]
gi|451755216|emb|CCQ87844.1| ATP-dependent RNA helicase PA3950 [Pseudomonas aeruginosa 18A]
Length = 449
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFAPEH 379
>gi|409398007|ref|ZP_11248859.1| ATP-dependent RNA helicase [Pseudomonas sp. Chol1]
gi|409117513|gb|EKM93941.1| ATP-dependent RNA helicase [Pseudomonas sp. Chol1]
Length = 441
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 228/374 (60%), Gaps = 12/374 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L+ E + ++ P+ +QAEAIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLIDPLLRTLETLDYRKPTPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALL----EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L ++A N + A VL PTRELA Q+ E F G + LR + GGV +
Sbjct: 62 RLTMEGAKVASN-----SVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINP 116
Query: 125 QTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K ++VATPGRL+D + N GF+ L+ LVLDEADR+L+ F LD++
Sbjct: 117 QMMALRKGIDVLVATPGRLLDLYRQNAVGFN--QLQALVLDEADRMLDLGFADELDQLFC 174
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ RQT LFSAT ++ ++++ R L++P+ +E + + + T+KQ V K K
Sbjct: 175 ALPKRRQTLLFSATFSEAIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSEL 234
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+++L E +VF +T L L+ G + I G Q+ RL AL +FKAGE
Sbjct: 235 FLHLLAERRWGQVLVFVKTRKGVDQLVDELQAQGIASDAIHGDKPQASRLRALERFKAGE 294
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ TDVA+RGLDI + V+N+D+PT ++DY+HR+GRT RAG TG A+SLV+ E++
Sbjct: 295 VRILVATDVAARGLDIHDLPQVVNFDLPTVAEDYVHRIGRTGRAGATGEAVSLVSADEVD 354
Query: 364 WYLQIEKLIGKKLP 377
IE LI + LP
Sbjct: 355 QLAAIETLINQVLP 368
>gi|296387524|ref|ZP_06876999.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAb1]
gi|416877267|ref|ZP_11919721.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 152504]
gi|334839751|gb|EGM18425.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 152504]
Length = 449
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGGDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QTNRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|374384807|ref|ZP_09642324.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
gi|373227611|gb|EHP49924.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
Length = 397
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 229/390 (58%), Gaps = 23/390 (5%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL + D L++A G+ P+ IQ + IP AL GKD++G+AQTG+GKT AFA+PILQ
Sbjct: 2 TFKELNIADSLLKAISEKGYHCPTPIQIQGIPVALSGKDILGIAQTGTGKTAAFAIPILQ 61
Query: 69 AL------LEIAENQRTVPAFF----------------ACVLSPTRELAIQISEQFEALG 106
L ++++ + +F A +L+PTRELA+QI + F G
Sbjct: 62 HLSQNNASFSVSQDTQEKKSFSRQENNPGKKYRKREIQALILTPTRELALQIGDSFTDYG 121
Query: 107 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 166
LR V+ GG+ + QT AL + I+VATPGRL+D L N L +LK+ VLDEA
Sbjct: 122 KYTGLRHCVIFGGIKQLVQTTALRRGVDILVATPGRLLD-LMNQGFVDLSSLKHFVLDEA 180
Query: 167 DRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVD 226
DR+L+ F + IL +P QT LFSATM + + L + LK PV++E S VD
Sbjct: 181 DRMLDMGFINDIKRILLKLPAQHQTLLFSATMPQSIAALSASILKKPVRVEVNPVSSPVD 240
Query: 227 TLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGH 286
T++Q FV K LV +L + S +VF+RT +A L G R I G+
Sbjct: 241 TVEQCIYFVEKMKKKNLLVQLLGQDIKKSVLVFSRTKHGADNIARSLSKEGIRTESIHGN 300
Query: 287 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 346
SQ +R ALN FK+G+ +++ TD+A+RG+DI ++MVINYD+P ++ Y+HR+GRT R
Sbjct: 301 KSQGQRQRALNAFKSGKVKVMVATDIAARGIDIDRLEMVINYDLPDTAETYVHRIGRTGR 360
Query: 347 AGRTGVAISLVNQYELEWYLQIEKLIGKKL 376
AG TG A++ + E +I+KL GKKL
Sbjct: 361 AGNTGTALTFCSPDEKVMVKEIQKLTGKKL 390
>gi|312796956|ref|YP_004029878.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
gi|312168731|emb|CBW75734.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
Length = 508
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 163/377 (43%), Positives = 226/377 (59%), Gaps = 5/377 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F GL +++A G+ P+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 43 SFDGFGLAAPILQAIGEQGYTKPTPIQAQAIPIVLAGRDVMGAAQTGTGKTASFSLPIIQ 102
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL +A + PA A +L+PTRELA Q++ A +LR AV+ GGVDM Q
Sbjct: 103 RLLPLASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTALRSAVVFGGVDMNPQ 161
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T L + I++ATPGRL+DH+ K SL ++ LVLDEADR+L+ F L ILN++
Sbjct: 162 TAELRRGVEILIATPGRLLDHVQQ-KSTSLAQVQMLVLDEADRMLDMGFLPDLQRILNLL 220
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT + ++KKL L++PV IE A ST ++Q V K +V
Sbjct: 221 PSQRQTLLFSATFSAEIKKLASTYLRDPVTIEVARSNSTASNVRQIVFEVAEPDKQAAVV 280
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + +VF + LA L G A I G SQS+R+ AL+ FK GE
Sbjct: 281 QLIRQRELKQVIVFCNSKIGASRLAKQLERDGVVATAIHGDRSQSERMQALDAFKRGEIE 340
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 341 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSGNERKQL 400
Query: 366 LQIEKLIGKKLPEFPAE 382
IEKLI + L P E
Sbjct: 401 ADIEKLIKRALTIEPLE 417
>gi|325104041|ref|YP_004273695.1| DEAD/DEAH box helicase [Pedobacter saltans DSM 12145]
gi|324972889|gb|ADY51873.1| DEAD/DEAH box helicase domain protein [Pedobacter saltans DSM
12145]
Length = 451
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 227/379 (59%), Gaps = 6/379 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ L L + +A + + ++TP+ IQA+AIP L+ KDL+G AQTG+GKT AFA+PILQ
Sbjct: 3 SFETLNLIQPIQKALKALNYQTPTPIQAQAIPLILQRKDLLGCAQTGTGKTAAFAIPILQ 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + A +++PTRELAIQI + F G + L+ AV+ GGV+ Q A
Sbjct: 63 LLDEDLKKNHQKNTIKALIVTPTRELAIQIGDSFSDYGKNLRLKHAVIFGGVNQKSQVDA 122
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L + K SL + VLDEADR+L+ F + +I+ V+P+
Sbjct: 123 LQKGVDILVATPGRLLD-LMHQKHLSLKHINLFVLDEADRMLDMGFINDVKKIIAVLPQH 181
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM ++KL LK+PVK+E ST DT+ Q FV K+ L++IL
Sbjct: 182 RQSLFFSATMPPVIQKLSEEILKSPVKVEVTPVSSTADTINQTVFFVDKNNKNDLLLHIL 241
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VFTRT + L ++ I G+ SQ+ R AL+ FK +L+
Sbjct: 242 KDQLLDSVLVFTRTKHGADRVVKTLAKQHIKSAAIHGNKSQNARQRALDDFKTKAIRVLV 301
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI S+ VINY+IP + Y+HR+GR+ RAG G+AIS + E + I
Sbjct: 302 ATDIAARGIDIDSLKYVINYEIPNIPETYVHRIGRSGRAGAEGIAISFCDVDEKPFLKDI 361
Query: 369 EKLIGKKLP-----EFPAE 382
EK+IGK +P FP E
Sbjct: 362 EKIIGKSVPLGEDNPFPME 380
>gi|15599145|ref|NP_252639.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
gi|218889767|ref|YP_002438631.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa LESB58]
gi|418587191|ref|ZP_13151225.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418592075|ref|ZP_13155953.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P2]
gi|421152185|ref|ZP_15611773.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 14886]
gi|421518498|ref|ZP_15965172.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO579]
gi|9950138|gb|AAG07337.1|AE004813_4 probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
gi|218769990|emb|CAW25752.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa LESB58]
gi|375042196|gb|EHS34856.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375049103|gb|EHS41612.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P2]
gi|404347980|gb|EJZ74329.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO579]
gi|404525815|gb|EKA36064.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 14886]
Length = 449
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|313109386|ref|ZP_07795348.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 39016]
gi|386068049|ref|YP_005983353.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa NCGM2.S1]
gi|310881850|gb|EFQ40444.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 39016]
gi|348036608|dbj|BAK91968.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa NCGM2.S1]
Length = 449
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFAPEH 379
>gi|407712738|ref|YP_006833303.1| DEAD/DEAH box helicase [Burkholderia phenoliruptrix BR3459a]
gi|407234922|gb|AFT85121.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 512
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 229/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A + G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 38 TFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 97
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ ++ +LR AV+ GGVDM Q
Sbjct: 98 RLLPHASTSAS-PARHPVRALILTPTRELADQVAANVQSYAKHTALRSAVVFGGVDMNPQ 156
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 157 SDQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 215
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 216 PKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVV 275
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E + +VF + LA L G A I G SQ++R+ AL+ FK GE
Sbjct: 276 QLIRERNLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQNERMQALDAFKRGEIE 335
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 336 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSPNEKKQL 395
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 396 ADIEKLIKRPL 406
>gi|339449340|ref|ZP_08652896.1| DEAD/DEAH box helicase domain-containing protein [Lactobacillus
fructivorans KCTC 3543]
Length = 496
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 224/379 (59%), Gaps = 8/379 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+LGL D L++A E G+ P+ IQA+ IP L+G+D+IG AQTG+GKT AFALPILQ
Sbjct: 3 FKDLGLSDSLLKAIEKSGFDEPTPIQAQTIPLLLKGQDVIGQAQTGTGKTAAFALPILQ- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
EI N P A V+SPTRELAIQ ++ + LG R V+ GG D+ QQ L
Sbjct: 62 --EIDLNN---PDVQALVISPTRELAIQTQKEMQRLGGVEGARVQVVYGGSDIRQQIRDL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K P IVV TPGR++DH+ N + LG +KYLVLDEAD +LN F ++ I+ IP R
Sbjct: 117 KKTPQIVVGTPGRILDHI-NRRTLKLGHVKYLVLDEADEMLNMGFLDDIESIIKNIPSDR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K++ +++P +I SK T D + Q Y V K + +
Sbjct: 176 QTLLFSATMPAPIKRVGVQFMRDPKQITVKSKELTTDLVDQYYVKVKDNEKFDTMTRLFD 235
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ T+VF RT ++ L G RA + G ++Q +R +N+FK + N L+
Sbjct: 236 VQTPKVTIVFCRTKRRVDEVSKGLIARGYRAAGLHGDLTQKRRTQIMNEFKNDKINYLVA 295
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVA+RG+D+ V V N+DIP + + Y+HR+GRT RAG G +++ V E+ + IE
Sbjct: 296 TDVAARGIDVSGVTYVYNFDIPQDPESYVHRIGRTGRAGHHGTSVTFVTPNEMSYLRGIE 355
Query: 370 KLIG-KKLPEFPAEEEEVL 387
KL + LP P E+E L
Sbjct: 356 KLTKVRMLPLKPPSEDEAL 374
>gi|162606504|ref|XP_001713282.1| DEAD box protein [Guillardia theta]
gi|12580748|emb|CAC27066.1| DEAD box protein [Guillardia theta]
Length = 386
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 225/377 (59%), Gaps = 6/377 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ++G+ ++ CE VG+K +K+Q IPH L GKDL+ +QTGSGKT A+ LP+LQ
Sbjct: 4 FDQIGICKQISRVCEAVGFKKATKVQVYTIPHFLIGKDLLVYSQTGSGKTLAYILPLLQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL N + ++ P+REL QIS FE + ++R A L GG+D Q + +
Sbjct: 64 LLYKKNN------YLPIIIVPSRELVFQISTTFETISCVFNIRIASLTGGIDPNVQLVMI 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
P I+++TPGRL++ L TK + LVLDEAD+L++ DF++ ++ I + + +
Sbjct: 118 SSNPDIIISTPGRLVEILKLTKNLEIKFCTDLVLDEADKLIHSDFKREINIINSKTNKNK 177
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
+ LFSATM+ ++K++ + NPV+I + L Q Y F P +YK+ YL+Y++
Sbjct: 178 KLMLFSATMSLGLEKIKFFKISNPVRIIINQNFFISPNLIQNYIFCPFRYKEIYLLYLIN 237
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
E + F T T ++++L+ I G +SQ++R+ L+KF G+ IL+
Sbjct: 238 EFYEEKLICFVETQKMTEKISILLKKFSFDCYIIHGSLSQNERIDTLSKFTNGKKKILVA 297
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+ASRGLDI +V ++INYD P KDYIHR GRT RAGR G AISL+ QY+L + +IE
Sbjct: 298 TDLASRGLDICAVSLIINYDFPIYLKDYIHRTGRTGRAGRAGRAISLITQYDLRTFQKIE 357
Query: 370 KLIGKKLPEFPAEEEEV 386
++ K+ E + ++
Sbjct: 358 SILNIKIAELNISKRKI 374
>gi|116051990|ref|YP_789167.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa UCBPP-PA14]
gi|355639459|ref|ZP_09051174.1| hypothetical protein HMPREF1030_00260 [Pseudomonas sp. 2_1_26]
gi|392982323|ref|YP_006480910.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa DK2]
gi|419756955|ref|ZP_14283300.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PADK2_CF510]
gi|421172786|ref|ZP_15630547.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CI27]
gi|115587211|gb|ABJ13226.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|354831879|gb|EHF15883.1| hypothetical protein HMPREF1030_00260 [Pseudomonas sp. 2_1_26]
gi|384396710|gb|EIE43128.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317828|gb|AFM63208.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa DK2]
gi|404537189|gb|EKA46803.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CI27]
Length = 449
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFAPEH 379
>gi|393783444|ref|ZP_10371617.1| hypothetical protein HMPREF1071_02485 [Bacteroides salyersiae
CL02T12C01]
gi|392668877|gb|EIY62370.1| hypothetical protein HMPREF1071_02485 [Bacteroides salyersiae
CL02T12C01]
Length = 421
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/432 (41%), Positives = 253/432 (58%), Gaps = 20/432 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L L + +++A + G+ +P+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 3 FENLNLIEPILKALQEEGYTSPTPIQEQSIPVLLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + A +L+PTRELAIQI E FEA G L+ AV+ GGV QT AL
Sbjct: 63 LYKTDHRK----GIKALILTPTRELAIQIGECFEAYGRYTGLKHAVIFGGVGQKPQTDAL 118
Query: 130 GKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
I+VATPGRL+D +T +GF SL TL + VLDEADR+L+ F + IL ++P
Sbjct: 119 RNGVQILVATPGRLLDLIT--QGFISLKTLDFFVLDEADRMLDMGFIHDIRRILKLLPAK 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++ L + L +P K+E STVDT+ Q FV K K L+++L
Sbjct: 177 RQTLFFSATMPPEIETLANSMLTDPEKVEVTPASSTVDTIAQHVYFVEKKEKKDLLLHLL 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S S ++FTRT LA L G RA I G+ SQ+ R AL +FK +LI
Sbjct: 237 KDKSIESVLIFTRTKYGADKLARTLTKAGIRAEAIHGNKSQNARQRALTEFKNHTLRVLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG G+AIS E+ + I
Sbjct: 297 ATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGIAISFCESEEIPYLKDI 356
Query: 369 EKLIGKKLP---EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 425
+KLIGK +P E P E + E TE ++ K NK R G + D R+
Sbjct: 357 QKLIGKTIPVVSEHPFITNEGMKAQEVKTE-----EIKAKAKENKVYR-GSRSNGDFWRR 410
Query: 426 FGINKKKLSKRK 437
KK++ KR+
Sbjct: 411 ----KKQVPKRE 418
>gi|209517599|ref|ZP_03266438.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209502012|gb|EEA02029.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 510
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/372 (43%), Positives = 229/372 (61%), Gaps = 5/372 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+TF + GL ++++A + G+ +P+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+
Sbjct: 33 ETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVLAGRDVMGAAQTGTGKTASFSLPII 92
Query: 68 QALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
Q LL A + PA A +L+PTRELA Q++ +A +LR AV+ GGVDM
Sbjct: 93 QRLLPQASTSAS-PARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNP 151
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN+
Sbjct: 152 QSEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNL 210
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +
Sbjct: 211 LPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEGDKTGAV 270
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
V ++ E +VF + LA L G A I G SQS+R+ AL+ FK GE
Sbjct: 271 VKLIRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQSERMQALDAFKRGEV 330
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 331 EALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQ 390
Query: 365 YLQIEKLIGKKL 376
IEKLI + L
Sbjct: 391 LADIEKLIKRPL 402
>gi|358065451|ref|ZP_09151993.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
gi|356696343|gb|EHI57960.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
Length = 534
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 221/368 (60%), Gaps = 1/368 (0%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L L++A E G+ PS IQ +AIP+ LE +DL+G AQTG+GKT AFALPI+Q
Sbjct: 3 FKELNLSPLLLKALEKKGYSQPSPIQEQAIPYVLEKRDLLGCAQTGTGKTAAFALPIIQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L+E ++ A +L+PTRELA+QI++ + G ++ V+ GGV + Q L
Sbjct: 63 LMECPRKRQQKKPIRALILTPTRELALQIADNIKEYGEYTPVKGTVIFGGVSAVPQIQDL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K I+VATPGRL D L + L ++ VLDEADR+L+ F + +++ ++P+ R
Sbjct: 123 RKGVDILVATPGRLND-LIGQREIDLSYVEIFVLDEADRMLDMGFIHDVKKVIALLPKKR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +++ L L NPVK+E STVD ++ +V K L Y+L
Sbjct: 182 QTLLFSATMPGEIQSLASKLLHNPVKVEVTPVSSTVDMIETSLYYVDKANKRKLLEYLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ST+VFTRT ++ L G A I G SQ R ALN FK+G+ +L+
Sbjct: 242 HEDITSTLVFTRTKHGADQVSKYLTKAGINAAAIHGDKSQGARQTALNNFKSGKLRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VIN+D+P S+ Y+HR+GRT RAG G A+S E ++ IE
Sbjct: 302 TDIAARGIDIEELSCVINFDLPNISETYVHRIGRTGRAGLGGRALSFCAIEEKDYVRDIE 361
Query: 370 KLIGKKLP 377
KLIGK +P
Sbjct: 362 KLIGKTIP 369
>gi|58038681|ref|YP_190645.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
gi|58001095|gb|AAW59989.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
Length = 431
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/389 (42%), Positives = 223/389 (57%), Gaps = 9/389 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F EL L + + +A G+ TP+ IQA AIP+ LEG+DL+GLAQTG+GKT AFALPIL
Sbjct: 3 SFAELKLAEPIQKALAEEGYTTPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPILN 62
Query: 69 ALLEIAENQRTVP--AFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
I N+R P A VL+PTRELA QI E F A + AV+ GGV +Q
Sbjct: 63 ---HIFTNRRPAPPKGVRALVLAPTRELASQIGESFAAYARHMKFSYAVVFGGVGQGRQI 119
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ ++VA PGRL+D L K L TL+ LVLDEADR+L+ F + + I+ ++P
Sbjct: 120 ETTRRGVDVLVAAPGRLLD-LIGQKHIDLSTLEILVLDEADRMLDMGFVRDIQRIMALLP 178
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT LFSATM + L + LKNP ++ + STVD + Q FV + K +
Sbjct: 179 KQRQTLLFSATMPPSISDLAHSLLKNPATVQVTPESSTVDRINQAVMFVDSGSKKDAALM 238
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L S + +VFT +A L G RA I G+ SQ R A+ F++G
Sbjct: 239 LLESPSVARAVVFTLMKHEANKVAEFLNKNGIRAEAIHGNKSQGARERAMAGFRSGAIKA 298
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RG+D+ V V NYD+P + Y+HR+GRTARAGR G A+SL + + W
Sbjct: 299 LVATDIAARGIDVDEVSHVFNYDLPNVPESYVHRIGRTARAGREGCAVSLCDAEQRAWLK 358
Query: 367 QIEKLIGKKLP---EFPAEEEEVLLLLER 392
IEK IGK +P + P EE L +R
Sbjct: 359 DIEKKIGKPIPVVTDHPFHSEEARLSTQR 387
>gi|288925923|ref|ZP_06419853.1| ATP-dependent RNA helicase RhlE [Prevotella buccae D17]
gi|288337347|gb|EFC75703.1| ATP-dependent RNA helicase RhlE [Prevotella buccae D17]
Length = 375
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 229/369 (62%), Gaps = 2/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL + +++A E ++TP+ IQ +AIP LEG+DL+G+AQTG+GKT AFA+PI+Q
Sbjct: 2 TFNELNISKPILKALELKEYETPTPIQQKAIPIGLEGRDLLGIAQTGTGKTAAFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + A++ R A +L+PTRELAIQI E F+ LRC V+ GGV Q
Sbjct: 62 QLAKSADDNRR-RDIKALILTPTRELAIQIEECFKDYSKFTRLRCCVIFGGVSQNGQVKE 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I++ATPGRL+D L + +L + + VLDEADR+L+ F + +++ ++P+
Sbjct: 121 LERGVDILIATPGRLLD-LISQHIITLEHICHFVLDEADRMLDMGFIHDIKKLIPLLPKR 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM + + KL ++ L P ++E A S VDT++Q+ FV K LV +L
Sbjct: 180 RQTLLFSATMPETIAKLSKSLLYKPARVEVAPVSSVVDTIEQRLYFVEKPQKTDLLVSVL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VF+RT +A L+ I G+ SQ+ R AL FK+G+ +++
Sbjct: 240 KNDGNRSALVFSRTKHGADRIARKLKARHIECEAIHGNKSQNARQRALTNFKSGKTRVIV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI ++ MVINYD+P ++ Y+HR+GRT RAG +GVA++ Q E I
Sbjct: 300 ATDIAARGIDIANLQMVINYDLPDVAETYVHRIGRTGRAGNSGVALTFCTQDERPMVRDI 359
Query: 369 EKLIGKKLP 377
+KL GKKLP
Sbjct: 360 QKLTGKKLP 368
>gi|224369411|ref|YP_002603575.1| protein RhlE2 [Desulfobacterium autotrophicum HRM2]
gi|223692128|gb|ACN15411.1| RhlE2 [Desulfobacterium autotrophicum HRM2]
Length = 460
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 228/369 (61%), Gaps = 3/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ELGLR EL++A + G+ P+ IQ IP L G+D++ AQTG+GKT AFALPI++
Sbjct: 2 SFEELGLRAELIKAVKTKGYIEPTPIQIRVIPAILNGQDILARAQTGTGKTDAFALPIVE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+L + R P A VL+PTRELA+Q+ E +A +SLRC V+ GGV++ Q
Sbjct: 62 -ILARGKAHRRHPR--ALVLTPTRELALQVGESIKAYARRVSLRCTVVYGGVNVNPQIDR 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL+D + L +++LV DEADR+L+ F + +IL ++P+
Sbjct: 119 LKRGVDILVATPGRLLDLAAFNRDVKLSKIEFLVFDEADRMLDLGFSDEISQILELVPQD 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSAT T++++ L LK P +IE + +++ Q+ V K L++++
Sbjct: 179 RRTMLFSATYTRQIRDLADKMLKTPEQIEVTPNTTVAESIVQKVHLVEKSNKRELLIHLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
T +VFTRT LA L + A + G+ SQS R L +FK GE IL+
Sbjct: 239 TRSDWRQVLVFTRTKHGANKLAERLAQVKISAAALHGNKSQSFRTRTLQEFKNGEIRILV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + V+NYD+P+ ++DY+HR+GRT RAG GVA+SLV++ E + +
Sbjct: 299 ATDVAARGLDITGLPHVVNYDMPSVAEDYVHRIGRTGRAGIQGVAVSLVSKEEKVFLKSV 358
Query: 369 EKLIGKKLP 377
E L+ +K+P
Sbjct: 359 ESLLEQKIP 367
>gi|29347295|ref|NP_810798.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339194|gb|AAO76992.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 374
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 225/369 (60%), Gaps = 4/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL + + +++A E G+ P+ IQ +AIP AL KD++G AQTG+GKT +FA+PI+Q
Sbjct: 2 TFKELNITEPILKAIEEKGYTVPTPIQEKAIPVALAKKDILGCAQTGTGKTASFAIPIIQ 61
Query: 69 AL-LEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L L E +R+ A +L+PTRELA+QISE E +R V+ GGV+ Q
Sbjct: 62 HLHLNKGEGKRS--EIKALILTPTRELALQISECIEDYSKYTRIRHGVIFGGVNQRPQVD 119
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L K I+VATPGRL+D L N L ++Y VLDEADR+L+ F + IL +P+
Sbjct: 120 MLHKGIDILVATPGRLLD-LMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKLPK 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
+QT FSATM + L + LKNPVKI K STVD++KQ FV K K L+ I
Sbjct: 179 EKQTLFFSATMPDTIIALTNSLLKNPVKIYVTPKSSTVDSIKQLVYFVEKKEKSLLLISI 238
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S ++F+RT + +L G + I G+ SQ+ R AL FK+G+ ++
Sbjct: 239 LQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVM 298
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+ASRG+DI + +VINYD+P + Y+HR+GRT RAG G+A++ +Q E +
Sbjct: 299 VATDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNAGMALTFCSQEERKQIND 358
Query: 368 IEKLIGKKL 376
I+KL GKKL
Sbjct: 359 IQKLTGKKL 367
>gi|312129179|ref|YP_003996519.1| dead/deah box helicase domain-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311905725|gb|ADQ16166.1| DEAD/DEAH box helicase domain protein [Leadbetterella byssophila
DSM 17132]
Length = 373
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 225/368 (61%), Gaps = 6/368 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L L L +A + G+ + + IQ +AIP L+G+DL+G AQTG+GKT AFA+PIL+
Sbjct: 3 FENLNLSAPLAQALQEYGYTSLTPIQEQAIPKVLQGQDLLGCAQTGTGKTAAFAIPILER 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+L+ +N+R + +L+PTRELAIQI + F+A I + AV+ GGV+ +Q L
Sbjct: 63 ILQNPKNKRQIRVL---ILTPTRELAIQIGDNFKAYSKHIKISHAVIFGGVNQNKQVNQL 119
Query: 130 GKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ I++ATPGRL+D ++ +GF L L LVLDEADR+L+ F + +IL IP
Sbjct: 120 KQGVEILIATPGRLLDLMS--QGFVRLNGLDTLVLDEADRMLDMGFVHDVKKILTKIPTE 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM + ++K + L NP +E ST +T+KQ FV K K L+ IL
Sbjct: 178 RQTLFFSATMPQSIRKFAASILTNPAYVEVTPVSSTAETVKQGVYFVDKKEKTPLLINIL 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S T++FTRT L L +G A I G+ SQ+ R AL FK+ N+LI
Sbjct: 238 KDQSTDRTLIFTRTKHGADKLVKQLGKVGIPAAAIHGNKSQNARQRALEDFKSSRLNVLI 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + VINY++P + Y+HR+GRT RAG GVA+S +Q EL + I
Sbjct: 298 ATDIAARGIDIEELPYVINYELPNVPETYVHRIGRTGRAGAEGVAVSFCDQEELNDFKNI 357
Query: 369 EKLIGKKL 376
+KL G ++
Sbjct: 358 QKLTGIRI 365
>gi|390953372|ref|YP_006417130.1| DNA/RNA helicase [Aequorivita sublithincola DSM 14238]
gi|390419358|gb|AFL80115.1| DNA/RNA helicase, superfamily II [Aequorivita sublithincola DSM
14238]
Length = 423
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 227/373 (60%), Gaps = 13/373 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK LGL D L++A G++TPS IQ +AIP LE KD++ AQTGSGKT FALP+LQ
Sbjct: 2 SFKSLGLSDALLQAISKKGYETPSAIQKKAIPLILERKDVLASAQTGSGKTAGFALPMLQ 61
Query: 69 ALLEIAENQRTVPAFF-----ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
L + PAF A +L+PTRELA Q+ ++F LR V+ GGV
Sbjct: 62 IL-------NSEPAFRKRPVRALILTPTRELAAQVEDEFREYSEFTDLRSTVIFGGVGAN 114
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q AL I+VATPGRL+D L N SL ++ LVLDEADR+L+ F + + +IL
Sbjct: 115 PQIKALRNGVDILVATPGRLLD-LENQNALSLSKVEILVLDEADRMLDMGFLRDIKKILA 173
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
++P RQ LFSAT +K++KKL L +PV +EA + +TV+ + Q V K
Sbjct: 174 LLPNKRQNLLFSATFSKEIKKLANEFLHHPVLVEATPENTTVEKIDQTVYRVDKAQKTDL 233
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
++ +++E + +VFTRT L+ L + I G+ SQ R AL+ FK G+
Sbjct: 234 IIKLISEGNWQQVLVFTRTKHGANRLSEKLEKAKITSAAIHGNKSQGARTRALSGFKEGK 293
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TD+A+RGLDIP + VIN+++P S+DY+HR+GRT RAG +G A+SLV+ E+
Sbjct: 294 VRVLVATDIAARGLDIPLLPHVINFELPNISEDYVHRIGRTGRAGASGEALSLVSLDEVG 353
Query: 364 WYLQIEKLIGKKL 376
+ IEKLIG++L
Sbjct: 354 YLKDIEKLIGERL 366
>gi|416864075|ref|ZP_11915427.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 138244]
gi|334835095|gb|EGM13996.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 138244]
gi|453044054|gb|EME91780.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
PA21_ST175]
Length = 449
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHGSVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRR 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSIRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|187777742|ref|ZP_02994215.1| hypothetical protein CLOSPO_01334 [Clostridium sporogenes ATCC
15579]
gi|187774670|gb|EDU38472.1| DEAD/DEAH box helicase [Clostridium sporogenes ATCC 15579]
Length = 425
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 250/414 (60%), Gaps = 15/414 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLE---IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L + + +N RT+ A VL+PTRELAIQI E FE G I+L+ AV+ GGV QT
Sbjct: 63 LSKDKKVNKNPRTIRAL---VLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQT 119
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL + I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P
Sbjct: 120 KALREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
++RQ LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L +
Sbjct: 179 KVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSLLKH 238
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L + S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +
Sbjct: 239 LLKDESIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRV 298
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E++
Sbjct: 299 LVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEEIKSLK 358
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
IEKLI K++P ++ R + + K++ NKR +R+GG+
Sbjct: 359 AIEKLIHKEIPVVEDHPYKI-----RHINEDEVKKENTKNNYNKRPSSKRQGGN 407
>gi|76808776|ref|YP_332762.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1710b]
gi|76578229|gb|ABA47704.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
1710b]
Length = 559
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 89 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 148
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 149 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 207
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 208 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 266
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 267 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 326
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 327 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIE 386
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 387 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 446
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 447 ADIEKLIKRTL 457
>gi|399023038|ref|ZP_10725105.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
gi|398083597|gb|EJL74302.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
Length = 420
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 226/372 (60%), Gaps = 11/372 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L + +++A + G++ P+ IQ +AIP LE KD++G AQTG+GKT AFA+PILQ
Sbjct: 3 FTDLKIIKPILDALQKEGYEKPTPIQQKAIPSILERKDVLGTAQTGTGKTAAFAIPILQN 62
Query: 70 LLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L E R +P A +L+PTRELAIQI E F A G + L+ V+ GGV Q
Sbjct: 63 LTE-----RPLPKNNYIKALILTPTRELAIQIEESFNAYGRNLPLKKLVIFGGVKQGSQE 117
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
AL K I+VATPGRL+D + +G SL L+ VLDEADR+L+ F + I+ ++
Sbjct: 118 AALRKGVDILVATPGRLLDFIA--QGIISLKNLEIFVLDEADRMLDMGFVHDVKRIIKLL 175
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT FSATM +++KL + L NPVK+E ST +T++Q FV + K L
Sbjct: 176 PPRRQTLFFSATMPTEIQKLADSILNNPVKVEVTPVSSTAETIQQSVYFVQKEDKLGLLT 235
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+IL + S +VF+RT +A + G A I G+ SQ+ R ALN FK+G+
Sbjct: 236 HILKNHISESVLVFSRTKHGADKIARTIHKSGISAEAIHGNKSQNARQNALNNFKSGKTR 295
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TD+A+RG+DI + VINY++ S+ Y+HR+GRT RAG G +IS V+ +L
Sbjct: 296 VLVATDIAARGIDIDELKFVINYELSDVSETYVHRIGRTGRAGAEGTSISFVDGLDLLNL 355
Query: 366 LQIEKLIGKKLP 377
EKLIGKK+P
Sbjct: 356 RNTEKLIGKKIP 367
>gi|386057057|ref|YP_005973579.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa M18]
gi|347303363|gb|AEO73477.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa M18]
Length = 449
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKVELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|313231894|emb|CBY09006.1| unnamed protein product [Oikopleura dioica]
Length = 1234
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 223/368 (60%), Gaps = 9/368 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E E +F + G +L++A NVGW TP+ IQ +IP A+ G+D+ A TGSGKTGAF
Sbjct: 98 DEDEKDSFADYGFERKLLKALANVGWTTPTPIQKASIPVAVTGRDICACATTGSGKTGAF 157
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGS---GISLRCAVLVGG 119
LPILQ + + + VL PTREL +Q+ F L + +++ CA GG
Sbjct: 158 VLPILQRFA-LRDPSKVESCTRVLVLLPTRELCVQVFAVFRKLVAELENVTVACAA--GG 214
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
+D++QQT L + P I+VATPGRL+DHL NT FSL ++ LVLDEADR+L++ F +
Sbjct: 215 LDLVQQTQVLRRDPDILVATPGRLIDHLHNTPNFSLQEIEILVLDEADRMLDEFFASQMK 274
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAK 238
EIL+ + RQT LFSATMT V++L L P+KI +S D L+QQ+ R P +
Sbjct: 275 EILSQTCKTRQTMLFSATMTDTVQELTDVALTKPMKIFISSNTDVADGLEQQFVRIRPGR 334
Query: 239 YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
D + S ++ +T + ++L LG + + + G MSQ+ RL AL
Sbjct: 335 EGDREAMVAALNKSLRMLLILYQTRKMAHRMHILLGLLGLKVVELHGSMSQTARLEALAN 394
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK G +I++CTDVA+RGLDIPSV VIN +P N K Y+HRVGRTARAG+ G +ISLV
Sbjct: 395 FKNGTAHIMVCTDVAARGLDIPSVRTVINMTLPNNYKSYVHRVGRTARAGKQGRSISLVG 454
Query: 359 QYELEWYL 366
E EW +
Sbjct: 455 --ESEWKI 460
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 223/368 (60%), Gaps = 9/368 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E E +F + G +L++A NVGW TP+ IQ +IP A+ G+D+ A TGSGKTGAF
Sbjct: 647 DEDEKDSFADYGFERKLLKALANVGWTTPTPIQKASIPVAVTGRDICACATTGSGKTGAF 706
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGS---GISLRCAVLVGG 119
LPILQ + + + VL PTREL +Q+ F L + +++ CA GG
Sbjct: 707 VLPILQRFA-LRDPSKVESCTRVLVLLPTRELCVQVFAVFRKLVAELENVTVACAA--GG 763
Query: 120 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLD 179
+D++QQT L + P I+VATPGRL+DHL NT FSL ++ LVLDEADR+L++ F +
Sbjct: 764 LDLVQQTQVLRRDPDILVATPGRLIDHLHNTPNFSLQEIEILVLDEADRMLDEFFASQMK 823
Query: 180 EILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAK 238
EIL+ + RQT LFSATMT V++L L P+KI +S D L+QQ+ R P +
Sbjct: 824 EILSQTCKTRQTMLFSATMTDTVQELTDVALTKPMKIFISSNTDVADGLEQQFVRIRPGR 883
Query: 239 YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
D + S ++ +T + ++L LG + + + G MSQ+ RL AL
Sbjct: 884 EGDREAMVAALNKSLRMLLILYQTRKMAHRMHILLGLLGLKVVELHGSMSQTARLEALAN 943
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK G +I++CTDVA+RGLDIPSV VIN +P N K Y+HRVGRTARAG+ G +ISLV
Sbjct: 944 FKNGTAHIMVCTDVAARGLDIPSVRTVINMTLPNNYKSYVHRVGRTARAGKQGRSISLVG 1003
Query: 359 QYELEWYL 366
E EW +
Sbjct: 1004 --ESEWKI 1009
>gi|405360716|ref|ZP_11025657.1| ATP-dependent RNA helicase RhlE [Chondromyces apiculatus DSM 436]
gi|397090405|gb|EJJ21269.1| ATP-dependent RNA helicase RhlE [Myxococcus sp. (contaminant ex DSM
436)]
Length = 503
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 221/369 (59%), Gaps = 2/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF EL L++ L+ A + G+ TP+ IQ +AIPHAL GKD++G+AQTG+GKT AFALPILQ
Sbjct: 2 TFDELQLQETLLRAVKAEGYTTPTPIQQKAIPHALAGKDVLGVAQTGTGKTAAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L A P VL+PTRELA Q+ E F G + LR V+ GGV Q A
Sbjct: 62 RLSAKAPPGGARP-VRCLVLTPTRELAGQVGESFATYGKNLPLRHTVIFGGVGQNPQVQA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + ++VATPGRL+D L SL +L+ VLDEADR+L+ F + ++ +P
Sbjct: 121 LQRGVDVLVATPGRLLD-LMEQGCVSLRSLEVFVLDEADRMLDMGFIHDVRRVIKALPSK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSAT+ + L R+ L +PV++E ST +T+ QQ FV + K L ++L
Sbjct: 180 RQTLFFSATLPPDIVDLARSILTDPVRVEVTPASSTAETVSQQVYFVEREQKRGLLTHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E + S +VFTRT +A L G + I G+ SQ+ R AL++F++G +L+
Sbjct: 240 KEGNISRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + V+NYD+P + Y+HR+GRT RAG +G A+S + E + I
Sbjct: 300 ATDIAARGIDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDI 359
Query: 369 EKLIGKKLP 377
E+ I + +P
Sbjct: 360 ERTIRRNVP 368
>gi|365097957|ref|ZP_09331724.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
gi|363413202|gb|EHL20410.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
Length = 505
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/371 (42%), Positives = 226/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G+++ + IQA+AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL+ E+ T PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLLK-HESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSFL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NPV IE A T T++Q++ K +
Sbjct: 182 PKQRTTLLFSATFSPEIKRLASSYLQNPVTIEVARPNETASTVEQRFYSAGDDDKRRAIH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L +F + LA L G + + G SQ +RL AL FK+GE +
Sbjct: 242 QVLKSRGIKQAFIFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALEAFKSGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++LV+ +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDARLV 361
Query: 366 LQIEKLIGKKL 376
IEKLI KK+
Sbjct: 362 ADIEKLIKKKI 372
>gi|323525320|ref|YP_004227473.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323382322|gb|ADX54413.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1001]
Length = 486
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 229/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A + G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ ++ +LR AV+ GGVDM Q
Sbjct: 72 RLLPHASTSAS-PARHPVRALILTPTRELADQVAANVQSYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SDQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E + +VF + LA L G A I G SQ++R+ AL+ FK GE
Sbjct: 250 QLIRERNLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQNERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSPNEKKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|444316946|ref|XP_004179130.1| hypothetical protein TBLA_0B07950 [Tetrapisispora blattae CBS 6284]
gi|387512170|emb|CCH59611.1| hypothetical protein TBLA_0B07950 [Tetrapisispora blattae CBS 6284]
Length = 393
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 232/385 (60%), Gaps = 19/385 (4%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ F+ LGL LVE+ +++ TP+ IQ IP L+G+D IG A+TGSGKT AFA P+
Sbjct: 5 ITNFENLGLSRWLVESLKSMKITTPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAFAGPM 64
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L E FA +L+PTRELA+QI+EQF ALGS +++R ++VGG ++++Q
Sbjct: 65 LTKWSE------DPCGMFAVILTPTRELAMQIAEQFTALGSSMNIRVCLVVGGENIVKQA 118
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILN 183
L L +PH ++ATPGRL H+ + ++G KYLVLDEAD LL F K L +
Sbjct: 119 LELQNKPHFIIATPGRLAHHILRSGEDTVGGFIRCKYLVLDEADILLTSTFSKDLSVCIG 178
Query: 184 VIP--RMRQTYLFSATMTKKVKKLQRACLKN---PV---KIEAASKYSTVDTLKQQYRFV 235
+P RQT LF+AT+T +VK LQ A + P+ ++E+ K + TLK +Y V
Sbjct: 179 KLPPKEKRQTLLFTATITDQVKVLQDAPKHDGRLPLFSYQVESIDKVAIPSTLKTEYVLV 238
Query: 236 PAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P K+ YL ++LT + SS +VF +L L +L R + M Q +R
Sbjct: 239 PGHVKEAYLYHLLTCEAYNESSAIVFVNRTVTAEILRRTLYDLEVRVTSLHSQMPQQERT 298
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
+L++F+A +LI TDVASRGLDIP+V++VINYD+P + +IHR GRTARAGRTG A
Sbjct: 299 NSLHRFRANAARVLIATDVASRGLDIPTVELVINYDLPADPDTFIHRSGRTARAGRTGDA 358
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPE 378
IS V ++ IE+ I KK+ E
Sbjct: 359 ISFVTPNDISRIQSIEERINKKMSE 383
>gi|409407327|ref|ZP_11255778.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386433078|gb|EIJ45904.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 487
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 224/370 (60%), Gaps = 5/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++ GL ++++A G+ P+ IQA+AIP L+G+D++G AQTG+GKT F+LPI+Q
Sbjct: 18 FEDFGLSPDILKALSEQGYVHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQR 77
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LL A + + PA A +L+PTRELA Q++E +A LR V+ GGVDM QT
Sbjct: 78 LLAHASHSAS-PARHPVRALILTPTRELADQVAENVKAYSRFTPLRSTVVFGGVDMAPQT 136
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L IV+ATPGRL+DH+ K +L + LV+DEADR+L+ F L I+N++P
Sbjct: 137 ATLRAGVEIVIATPGRLLDHVQQ-KTVNLSQTQILVMDEADRMLDMGFLPDLQRIINLLP 195
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ LFSAT + ++KKL + NPV IE A +T + + Q V K + +
Sbjct: 196 KQRQNLLFSATFSPEIKKLAASFQNNPVTIEVARSNATAENVSQTIYKVEEAAKADAVSF 255
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
I+ + +VF+ T LA L G +A I G +QS+R+ AL FK G+ +
Sbjct: 256 IIRQRELKQVIVFSNTKIGASRLARTLVAEGVKASAIHGDKTQSERMAALESFKQGQIEV 315
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VINYD+P N++DY+HR+GRT RAG +G AISL + +
Sbjct: 316 LVATDVAARGLDIAELPCVINYDLPYNAEDYVHRIGRTGRAGASGDAISLFCDKDERLLV 375
Query: 367 QIEKLIGKKL 376
IEKLI KK
Sbjct: 376 DIEKLIKKKF 385
>gi|167585895|ref|ZP_02378283.1| DEAD/DEAH box helicase domain protein [Burkholderia ubonensis Bu]
Length = 487
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPILQ
Sbjct: 12 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPILQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A G LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYGKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L +VF + LA L G A I G +Q +R+ AL+ FK GE
Sbjct: 250 QLLRSRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKTQIERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|152974078|ref|YP_001373595.1| DEAD/DEAH box helicase [Bacillus cytotoxicus NVH 391-98]
gi|152022830|gb|ABS20600.1| DEAD/DEAH box helicase domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 511
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 225/373 (60%), Gaps = 7/373 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ELGL D L+++ E +G++ + IQAE IPHAL+GKD+IG AQTG+GKT AF LP+L+
Sbjct: 15 TFRELGLSDSLLQSVEKMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLE 74
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
++ N+ V V++PTRELAIQ+ E+ +G +R + GG D+ +Q A
Sbjct: 75 ---KVDTNKEMVQG---IVIAPTRELAIQVGEELYKIGQHKRVRILPIYGGQDINRQIRA 128
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHI+V TPGR++DH+ N K L ++ +VLDEAD +LN F + ++ IL +P
Sbjct: 129 LKKRPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 187
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
QT LFSATM + ++++ + P I+ +K T+ ++Q Y V K K L +L
Sbjct: 188 HQTLLFSATMPEPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLL 247
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VF RT L+ L G A I G ++Q+KR+ L KFK G +L+
Sbjct: 248 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 307
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI V V N+DIP + + Y+HR+GRT RAG+TG+A+ V E+ I
Sbjct: 308 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGLAMLFVTPREMGQLKNI 367
Query: 369 EKLIGKKLPEFPA 381
E+ +K+ A
Sbjct: 368 ERTTKRKMDRMKA 380
>gi|393787534|ref|ZP_10375666.1| hypothetical protein HMPREF1068_01946 [Bacteroides nordii
CL02T12C05]
gi|392658769|gb|EIY52399.1| hypothetical protein HMPREF1068_01946 [Bacteroides nordii
CL02T12C05]
Length = 422
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 229/370 (61%), Gaps = 7/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ L L + +++A + G+ +P+ IQ ++IP L+GKDL+G AQTG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALKEEGYSSPTPIQEQSIPVLLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + + A +L+PTRELAIQI E FEA G L+ V+ GGV QT A
Sbjct: 62 KLYKTDHRK----GIKALILTPTRELAIQIGECFEAYGKYTGLKHTVIFGGVGQKPQTDA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L I+VATPGRL+D +T +G+ SL TL + VLDEADR+L+ F + IL ++P+
Sbjct: 118 LRNGVQILVATPGRLLDLIT--QGYISLKTLDFFVLDEADRMLDMGFIHDIRRILKLLPQ 175
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSATM +++ L + L +P K+E STVDT+ Q FV K K L+++
Sbjct: 176 KRQTLFFSATMPPEIETLANSMLTHPEKVEVTPASSTVDTISQYVYFVEKKEKKDLLLHL 235
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S S ++FTRT LA +L G RA I G+ SQ+ R AL FK +L
Sbjct: 236 LKDQSIESVLIFTRTKHGADKLARILTKSGIRAEAIHGNKSQNARQRALTDFKNHTLRVL 295
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG G+AIS EL +
Sbjct: 296 IATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGHEGIAISFCESEELPYLKD 355
Query: 368 IEKLIGKKLP 377
I+KLIGK +P
Sbjct: 356 IQKLIGKTVP 365
>gi|421178877|ref|ZP_15636479.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa E2]
gi|404547823|gb|EKA56806.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa E2]
Length = 449
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKVELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|354557827|ref|ZP_08977084.1| DEAD/DEAH box helicase domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353549501|gb|EHC18942.1| DEAD/DEAH box helicase domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 497
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 231/391 (59%), Gaps = 12/391 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ELG+ ++++ + EN+G++ + IQ + IP ALEGKDLIG AQTG+GKT AF +P+++
Sbjct: 4 FRELGMSEQVLHSVENMGFEEATPIQEQTIPKALEGKDLIGQAQTGTGKTAAFGIPLVEK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+ AE VLSPTRELA+Q++E+ +G ++ + GG ++ +Q AL
Sbjct: 64 IEAGAEQ------LQGIVLSPTRELAVQVAEELNKIGQFKGIQTLPIYGGQEIDRQIRAL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRP I+VATPGRLMDH+ K L +K +VLDEAD +LN F + + IL +P R
Sbjct: 118 KKRPQIIVATPGRLMDHMRR-KTIRLSEIKIVVLDEADEMLNMGFVEDIHTILQEVPENR 176
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM + ++ L + +K P I +K TV ++Q Y V K K L +L
Sbjct: 177 QTLLFSATMPRSIQNLAQRFMKEPELISVKAKEVTVANIEQHYLEVQEKQKFDVLCRLLD 236
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S +VF RT LA L G A I G ++QSKR L +FK G IL+
Sbjct: 237 MQSPELAIVFGRTKRRVDELAEGLNKRGYSAEGIHGDLTQSKRDSVLRQFKEGTIEILVA 296
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TDVA+RGLDI V V N+DIP + + Y+HR+GRT RAG+TG+A++ V E+ IE
Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGLAVTFVTPREIGQLRMIE 356
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 400
+L +K+ P + L+E + +RI+
Sbjct: 357 QLTKRKMIRKP-----IPTLVEAIEGQQRIT 382
>gi|253996648|ref|YP_003048712.1| DEAD/DEAH box helicase [Methylotenera mobilis JLW8]
gi|253983327|gb|ACT48185.1| DEAD/DEAH box helicase domain protein [Methylotenera mobilis JLW8]
Length = 459
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/372 (45%), Positives = 233/372 (62%), Gaps = 7/372 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL EL+ A G+ TP+ IQA+AIP AL G DL+ AQTG+GKT AF+LP+LQ
Sbjct: 11 SFSTLGLAPELLRALTESGYTTPTPIQAQAIPVALAGGDLMAGAQTGTGKTAAFSLPLLQ 70
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL +A N T PA A +L+PTRELAIQ+ E +A LR V+ GGVD+ Q
Sbjct: 71 KLLPLANNS-TSPAKHPVRALILTPTRELAIQVEESVKAYAKHTQLRSLVVYGGVDIKTQ 129
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T L ++VATPGRL+DH+ K L ++ LVLDEADR+L+ F L IL ++
Sbjct: 130 TPHLKTGVEVLVATPGRLLDHIEQ-KTLQLNQVQMLVLDEADRMLDMGFMPDLKRILALL 188
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQ +FSAT + ++KKL L P IE A +T D + Q+ V K+ L+
Sbjct: 189 PKQRQNLMFSATFSNEIKKLADDFLTKPQLIEVARSNATNDNVTQKVYQVAQSDKEALLI 248
Query: 246 YILTEVSASSTMVFTRT-CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+L E A +VFT+T A+RL ++R G A I G +Q +R+ AL+ FKAG
Sbjct: 249 QLLREADAKQVIVFTKTKLTASRLSRSLVRE-GIAADAIHGDKNQQERIKALDAFKAGTV 307
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+ LI TDVA+RGLDI + MVINY+IP+ +DY+HR+GRT RAG GVAIS V+ E ++
Sbjct: 308 SALIATDVAARGLDISELPMVINYEIPSAPEDYVHRIGRTGRAGALGVAISFVSDDEEKY 367
Query: 365 YLQIEKLIGKKL 376
++IEKLI +++
Sbjct: 368 LVEIEKLIKRQI 379
>gi|358256585|dbj|GAA50154.1| ATP-dependent RNA helicase DDX49/DBP8 [Clonorchis sinensis]
Length = 766
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 249/427 (58%), Gaps = 44/427 (10%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK++G+ E++ + G P+++Q+ IP ++G D++ A+TGSGKT F +PI+Q
Sbjct: 283 SFKDIGVCPEIITMLRDKGITKPTEVQSGCIPAVIDGMDVVACAKTGSGKTATFLIPIIQ 342
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGS--GISLRCAVLV--GGVDMMQ 124
+L+ + F+A +++PTRELA QI EQ L G SL C VL+ GG ++
Sbjct: 343 SLMT------ELKPFYALIITPTRELAHQIGEQAAGLNLILGTSL-CNVLIITGGKSIVH 395
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKG------------FSLGTLKYLVLDEADRLLND 172
Q + L + PHIVVATPGRL D L + +SL + +VLDEADRLL D
Sbjct: 396 QGIDLARGPHIVVATPGRLADLLRTQQANLDDPSNPSSTEWSLMRTRVVVLDEADRLLED 455
Query: 173 DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRAC-------------LKNPVKIEAA 219
+F L I+N +P RQT LFSAT + VK A L P ++ +
Sbjct: 456 NFGADLSLIMNALPERRQTLLFSATFSDAVKTAVEASKARALEQNKRPPLLWQPAEVIGS 515
Query: 220 SKY----STVDTLKQQYRFVPAKYKDCYLVY----ILTEVSASSTMVFTRTCDATRLLAL 271
S STVDTL Q Y + ++K+ +LV+ LTE S +VFT C L+ L
Sbjct: 516 SSSTVGASTVDTLSQFYLLMRPEHKEAFLVHTVDQFLTENPCSLIIVFTNKCKWCHLIGL 575
Query: 272 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 331
M+ +LG + + + M Q +R+ +L F++ + ILI TD+ASRGLD P+VD+VIN+++P
Sbjct: 576 MMNSLGMKTVLLHSAMRQRERISSLTLFRSSQVRILIATDLASRGLDFPTVDIVINHNVP 635
Query: 332 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 391
KDY+HRVGRTARAG+TG+A++L + +E++ I++ IG+ L F E++V ++
Sbjct: 636 IRPKDYVHRVGRTARAGKTGLALTLCDLFEIKRLRAIQEFIGRDLSPFEVNEKKVAKIIT 695
Query: 392 RVTEAKR 398
V+ A+R
Sbjct: 696 EVSMARR 702
>gi|357403915|ref|YP_004915839.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
gi|351716580|emb|CCE22240.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
Length = 425
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 246/424 (58%), Gaps = 11/424 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LGL +L A G+KTP+ IQ +AIP L+G+D++ AQTG+GKT FALPILQ
Sbjct: 2 TFESLGLIAQLQTAVAEQGYKTPTPIQQKAIPLILDGRDVMAGAQTGTGKTAGFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E N++ P A +L PTRELA+Q+ + F+ G ++L V+ GGV M Q
Sbjct: 62 RLSETI-NKKPRP-VRALILVPTRELAVQVHQSFKDYGKHVALFSEVIFGGVSMNGQAQQ 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + IVVATPGRL+DH LG ++ LVLDEADR+L+ F++ +D IL ++PR+
Sbjct: 120 LRRGCDIVVATPGRLLDH-ARQGNVDLGRVEILVLDEADRMLDMGFKREVDAILALLPRL 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT + ++K L L +P+ IEA + DT++Q+ + +YK L Y++
Sbjct: 179 RQNLLFSATFSNEIKTLAGRLLHDPIAIEAPRQTIDADTVEQRIYPIKREYKRELLSYLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF RT LA L G R + G SQ R+ AL FK+G+ +L+
Sbjct: 239 GSGNWRQVLVFVRTRHGADRLAEQLIKDGIRTGVLHGDKSQGARMRALAGFKSGKIAVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+D+P+ ++DY+HR+GRT RAG G AISLV E L I
Sbjct: 299 ATDIAARGLDIDQLPHVVNFDLPSVAEDYVHRIGRTGRAGWVGEAISLVCPEEAPMLLAI 358
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGI 428
EKL+ + +P E + L R K+ ++ T + + ++R R +
Sbjct: 359 EKLLKRSIPRVADTGYEAVSLEVRPGAEKKDNKRTARSAPPVKKR--------THRAASV 410
Query: 429 NKKK 432
NKK+
Sbjct: 411 NKKR 414
>gi|83720702|ref|YP_441535.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
gi|83654527|gb|ABC38590.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
Length = 571
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E++ A G+ TP+ IQA AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 102 TFDQFGLAAEILRAIAEQGYTTPTPIQANAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 161
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 162 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 220
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 221 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 279
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A + T+ Q V K +V
Sbjct: 280 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 339
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 340 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIE 399
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 400 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 459
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 460 ADIEKLIKRTL 470
>gi|298385203|ref|ZP_06994762.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|383122089|ref|ZP_09942788.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|251837561|gb|EES65653.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|298262347|gb|EFI05212.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 374
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/369 (43%), Positives = 225/369 (60%), Gaps = 4/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL + + +++A E G+ P+ IQ +AIP AL KD++G AQTG+GKT +FA+PI+Q
Sbjct: 2 TFKELNITEPILKAIEEKGYTVPTPIQEKAIPVALAKKDILGCAQTGTGKTASFAIPIIQ 61
Query: 69 AL-LEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L L E +R+ A +L+PTRELA+QISE E +R V+ GGV+ Q
Sbjct: 62 HLHLNKGEGKRS--GIKALILTPTRELALQISECIEDYSKYTRIRHGVIFGGVNQRPQVD 119
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L K I+VATPGRL+D L N L ++Y VLDEADR+L+ F + IL +P+
Sbjct: 120 MLHKGIDILVATPGRLLD-LMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKLPK 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
+QT FSATM + L + LKNP+KI K STVD++KQ FV K K L+ I
Sbjct: 179 EKQTLFFSATMPDTIIALTNSLLKNPLKIYVTPKSSTVDSIKQLVYFVEKKEKSLLLISI 238
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S ++F+RT + +L G + I G+ SQ+ R AL FK+G+ ++
Sbjct: 239 LQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVM 298
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+ASRG+DI + +VINYD+P + Y+HR+GRT RAG G+A++ +Q E +
Sbjct: 299 VATDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNAGMALTFCSQEERKQIND 358
Query: 368 IEKLIGKKL 376
I+KL GKKL
Sbjct: 359 IQKLTGKKL 367
>gi|237793963|ref|YP_002861515.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
657]
gi|229261675|gb|ACQ52708.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
657]
Length = 425
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 245/411 (59%), Gaps = 9/411 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + + A VL+PTRELAIQI+E FE G I+L+ V+ GGV QT L
Sbjct: 63 LSKDKKANKNPRPIRALVLAPTRELAIQIAESFECYGKYINLKSVVIFGGVSQNPQTKVL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I++ATPGR++D L N K L +++ VLDEADR+L+ + +I++ +P++R
Sbjct: 123 REGVDILIATPGRMLD-LFNQKYIDLRNIEFFVLDEADRMLDMGMIHDVKKIISKLPKIR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L ++L
Sbjct: 182 QNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRALLKHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +L+
Sbjct: 242 DKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E + IE
Sbjct: 302 TDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEETKSLKAIE 361
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
KLI K++P ++ R + + K++ NKR +R+GG+
Sbjct: 362 KLINKEIPVVEDHPYKI-----RHINENEVKKENTKNNYNKRPFSKRQGGN 407
>gi|91794376|ref|YP_564027.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
gi|91716378|gb|ABE56304.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
Length = 496
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 226/366 (61%), Gaps = 3/366 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL L++A G+ TP+ IQA+AIP LEGKD++ AQTG+GKT F LP+L+
Sbjct: 2 SFSSLGLSAALLKAIAKQGYDTPTAIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + QR A VL+PTRELA Q+++ E G + L+ AV+ GGV ++ Q A
Sbjct: 62 ILSKGKPAQRG--QVRALVLTPTRELAAQVADSVETYGHNLPLKSAVVFGGVSIVPQIAA 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL+D L N + S TL+ LVLDEADR+L+ F + + ++L ++P+
Sbjct: 120 LKQGVDILVATPGRLLD-LCNQRALSFSTLEILVLDEADRMLDMGFIRDIRKVLAMLPKQ 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ +FSAT + +++L + + NPV+I + +T +T+ Q V K L+ ++
Sbjct: 179 RQNLMFSATFSDDIRELAKGLVNNPVEISVTPRNATANTVTQWVTPVGQSDKTSVLIDLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + +VF+RT +A L +A I G+ SQ R AL FKAG+ +++
Sbjct: 239 KDNNWQQVLVFSRTKHGANRIAKNLEAASIKAAAIHGNKSQGARTKALADFKAGKVQVMV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + V+N+D+P S+DY+HR+GRT RAG +G A+SLV E++ I
Sbjct: 299 ATDIAARGIDIDQLPFVVNFDLPNVSEDYVHRIGRTGRAGASGQAVSLVADEEVKLLHDI 358
Query: 369 EKLIGK 374
E+LIG+
Sbjct: 359 ERLIGR 364
>gi|69248308|ref|ZP_00604710.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257878842|ref|ZP_05658495.1| helicase [Enterococcus faecium 1,230,933]
gi|257881478|ref|ZP_05661131.1| helicase [Enterococcus faecium 1,231,502]
gi|257890700|ref|ZP_05670353.1| helicase [Enterococcus faecium 1,231,410]
gi|293560261|ref|ZP_06676758.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|294621795|ref|ZP_06700954.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|314938932|ref|ZP_07846197.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|314943517|ref|ZP_07850284.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|314948188|ref|ZP_07851582.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|314951548|ref|ZP_07854594.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|314991589|ref|ZP_07857065.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|314994922|ref|ZP_07860049.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|383327538|ref|YP_005353422.1| DEAD/DEAH box helicase [Enterococcus faecium Aus0004]
gi|389867363|ref|YP_006374786.1| DEAD/DEAH box helicase [Enterococcus faecium DO]
gi|415892439|ref|ZP_11549927.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|416131873|ref|ZP_11597781.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|424795449|ref|ZP_18221304.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|424819380|ref|ZP_18244487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|424856321|ref|ZP_18280560.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|424949231|ref|ZP_18364921.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|424956289|ref|ZP_18371077.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|424967919|ref|ZP_18381589.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|424976047|ref|ZP_18389165.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|424981969|ref|ZP_18394659.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|424984734|ref|ZP_18397253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|424987723|ref|ZP_18400084.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|424990961|ref|ZP_18403147.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|424995504|ref|ZP_18407380.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|424997413|ref|ZP_18409175.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|425000503|ref|ZP_18412062.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|425003235|ref|ZP_18414612.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|425006604|ref|ZP_18417774.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|425011167|ref|ZP_18422079.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|425013771|ref|ZP_18424487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|425017560|ref|ZP_18428061.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|425022464|ref|ZP_18432645.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|425030171|ref|ZP_18435374.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|425033448|ref|ZP_18438416.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|425034930|ref|ZP_18439786.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|425040930|ref|ZP_18445364.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|425044373|ref|ZP_18448536.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|425047569|ref|ZP_18451517.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|425053412|ref|ZP_18456957.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|430831942|ref|ZP_19449990.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430847435|ref|ZP_19465272.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430855628|ref|ZP_19473336.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|431544298|ref|ZP_19518594.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|431749300|ref|ZP_19538042.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|431755816|ref|ZP_19544461.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|431767952|ref|ZP_19556395.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|431769544|ref|ZP_19557952.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|431773402|ref|ZP_19561727.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|431776500|ref|ZP_19564761.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|431779582|ref|ZP_19567775.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|431782613|ref|ZP_19570746.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|431784440|ref|ZP_19572479.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
gi|68194452|gb|EAN08953.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257813070|gb|EEV41828.1| helicase [Enterococcus faecium 1,230,933]
gi|257817136|gb|EEV44464.1| helicase [Enterococcus faecium 1,231,502]
gi|257827060|gb|EEV53686.1| helicase [Enterococcus faecium 1,231,410]
gi|291598627|gb|EFF29685.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|291605711|gb|EFF35148.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|313590904|gb|EFR69749.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|313593873|gb|EFR72718.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|313596242|gb|EFR75087.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|313597889|gb|EFR76734.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|313641641|gb|EFS06221.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|313645321|gb|EFS09901.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|364093335|gb|EHM35615.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|364093511|gb|EHM35776.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|378937232|gb|AFC62304.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecium Aus0004]
gi|388532612|gb|AFK57804.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium DO]
gi|402924387|gb|EJX44599.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|402926241|gb|EJX46293.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|402930201|gb|EJX49880.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|402934931|gb|EJX54225.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|402946393|gb|EJX64674.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|402952005|gb|EJX69866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|402953338|gb|EJX71063.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|402962168|gb|EJX79137.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|402967955|gb|EJX84466.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|402973745|gb|EJX89845.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|402977156|gb|EJX92995.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|402978215|gb|EJX93973.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|402986313|gb|EJY01444.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|402988977|gb|EJY03941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|402992431|gb|EJY07139.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|402996952|gb|EJY11308.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|402997720|gb|EJY12029.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|403000335|gb|EJY14462.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|403002697|gb|EJY16644.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|403004081|gb|EJY17911.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|403004113|gb|EJY17941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|403009946|gb|EJY23359.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|403018997|gb|EJY31633.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|403027273|gb|EJY39167.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|403029941|gb|EJY41662.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|403030418|gb|EJY42102.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|403033364|gb|EJY44870.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|430480583|gb|ELA57757.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430537055|gb|ELA77408.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430546683|gb|ELA86626.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|430592410|gb|ELB30425.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|430611728|gb|ELB48804.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|430616431|gb|ELB53345.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|430630040|gb|ELB66417.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|430636649|gb|ELB72713.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|430636858|gb|ELB72912.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|430640819|gb|ELB76647.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|430641683|gb|ELB77478.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|430647250|gb|ELB82698.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|430649535|gb|ELB84911.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
Length = 503
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 230/381 (60%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQAE IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +KNP ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF-PAEEEEVL 387
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKEAF 374
>gi|256070762|ref|XP_002571711.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646384|emb|CCD58943.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 453
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 176/461 (38%), Positives = 258/461 (55%), Gaps = 48/461 (10%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ELG+ E+VE + G P+++Q IP LEG D++ A+TGSGKT AF +PILQ
Sbjct: 2 TFEELGVCPEIVELLRDKGINKPTEVQEGCIPVILEGNDVVACAKTGSGKTAAFLIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG--SGISLRCAVLV--GGVDMMQ 124
+L+ + +A +++PTRELA QI EQ L G L C VLV GG ++
Sbjct: 62 SLMT------ELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPL-CNVLVITGGRSIVH 114
Query: 125 QTLALGKRPHIVVATPGRLMDHL-----------TNTKGFSLGTLKYLVLDEADRLLNDD 173
Q++ L + PHIVV+TPGRL D L N ++L K +VLDEADRLL D+
Sbjct: 115 QSIDLARSPHIVVSTPGRLADLLRTQTAAQEADTENKPEWTLSRTKVVVLDEADRLLEDN 174
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRAC-------------LKNPVKIEAAS 220
F + L+ IL +P+ RQT LFSAT + VK A L P + S
Sbjct: 175 FGEDLNTILKALPKRRQTLLFSATFSGAVKSSLEAAKSVAYAENRRPPILWQPECMTTCS 234
Query: 221 KYS--TVDTLKQQYRFVPAKYKDCYLVY----ILTEVSASSTMVFTRTCDATRLLALMLR 274
TV+TL Q Y + ++K+ +LV+ LTE S M+FT C L+ LM+
Sbjct: 235 SAGAVTVETLSQYYILMRPEHKEAFLVHTVDQFLTENPHSLIMIFTNKCKWCHLIGLMMT 294
Query: 275 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 334
+LG + + M+Q R+ +L F++ + +LI TD+ASRGLD P+VD+VIN+++P
Sbjct: 295 SLGIKTTLLHSSMTQKNRISSLTLFRSSQIRVLIATDLASRGLDFPTVDIVINHNVPIRP 354
Query: 335 KDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVT 394
KDY+HRVGRTARAG+ G+A++L + +E++ I+ I K+L F E++V ++ V+
Sbjct: 355 KDYVHRVGRTARAGKAGLALTLCDLFEVKRLKAIQTFINKELKTFDVNEKKVAQIIAEVS 414
Query: 395 EAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSK 435
A+R D+ K DE +I + + K + SK
Sbjct: 415 IARR-------DAERKLDEIRFDEKREINKAKNLMKARSSK 448
>gi|167835963|ref|ZP_02462846.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis MSMB43]
Length = 397
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L++P IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRDPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIVELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|262275236|ref|ZP_06053046.1| ATP-dependent RNA helicase [Grimontia hollisae CIP 101886]
gi|262220481|gb|EEY71796.1| ATP-dependent RNA helicase [Grimontia hollisae CIP 101886]
Length = 410
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 219/365 (60%), Gaps = 7/365 (1%)
Query: 15 LRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIA 74
L L +G+ P+ IQ +AIPH L+GKD++G AQTG+GKT AFALP++ LLE
Sbjct: 9 LHPTLQHTLNALGYSDPTAIQQQAIPHVLDGKDVMGAAQTGTGKTAAFALPVIHQLLE-- 66
Query: 75 ENQRTVP-AFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRP 133
R V A V++PTRELA Q+ E+ SL+C L GG ++ Q L K+P
Sbjct: 67 ---RGVKGAARVLVVTPTRELAQQVYEKVVEYSQHTSLKCVALYGGANINPQKNQLTKKP 123
Query: 134 HIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYL 193
I+V TPGRL+DHL + +L +L L+LDEADR+L+ F + ++ +P+ RQT
Sbjct: 124 EIIVGTPGRLLDHL-HIGTLTLNSLDTLILDEADRMLDMGFISDIKRLMKKMPKTRQTLF 182
Query: 194 FSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA 253
FSAT K+V L L NPV+IE ++ ST +T+ Q V K K L Y++ +
Sbjct: 183 FSATYPKQVVDLAYRLLSNPVRIEVSTANSTAETVNQLVHPVDKKRKRELLSYLIGSRNL 242
Query: 254 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 313
+VF +T +T LA L+ G +A I G +Q R L FK+GE +L+ TDVA
Sbjct: 243 QQVLVFAKTRQSTEALANELKLDGLKAEAIHGEKTQGARNRVLEGFKSGEVRVLVATDVA 302
Query: 314 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 373
+RGLDIPS+D V NY++P +DYIHR+GRT RAG+ G+AISLV++ E IE LI
Sbjct: 303 ARGLDIPSLDTVFNYELPHQPEDYIHRIGRTGRAGKPGMAISLVSREEEGMLTAIETLID 362
Query: 374 KKLPE 378
+LP+
Sbjct: 363 LRLPQ 367
>gi|374600581|ref|ZP_09673583.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|423325817|ref|ZP_17303657.1| hypothetical protein HMPREF9716_03014 [Myroides odoratimimus CIP
103059]
gi|373912051|gb|EHQ43900.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|404605382|gb|EKB04983.1| hypothetical protein HMPREF9716_03014 [Myroides odoratimimus CIP
103059]
Length = 420
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/415 (38%), Positives = 248/415 (59%), Gaps = 16/415 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+L + ++ A E +G+ P+ IQA++IP L+G D+IG AQTG+GKT +F++PILQ
Sbjct: 15 TFKQLNIIQPILNAIEKIGYDQPTAIQAKSIPFILQGHDIIGCAQTGTGKTASFSIPILQ 74
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + ++ + + +L+PTRELAIQI E F+A G+ + ++ + GGV +Q
Sbjct: 75 LLQQQVNPKKGIRSL---ILTPTRELAIQIDENFKAYGAQLKIKHVAIFGGVSQHKQVGQ 131
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +V+ATPGRL+D L N + SL ++ +VLDEADR+L+ F K +++I IP
Sbjct: 132 LRRGVDVVIATPGRLLD-LLNQQLISLQHVEIVVLDEADRMLDMGFVKDVNKIFTKIPTK 190
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM ++KKL ++NP ++ + ST T++Q F K L IL
Sbjct: 191 RQTLFFSATMPPEIKKLVMQLVRNPKEVHVSPVSSTAGTIEQGVYFAEKDDKLDLLFSIL 250
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S ++VFTRT LA L ++G A I G+ SQ+ R AL+ FKA + +LI
Sbjct: 251 KDASIQRSLVFTRTKFGADRLAKKLVSMGLSAAAIHGNKSQNARQRALSDFKANKIRVLI 310
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + V+NY++P + Y+HR+GRT RAG +GVA+S E++ +I
Sbjct: 311 ATDIAARGIDIEELPHVVNYELPNIPESYVHRIGRTGRAGASGVAVSFCGTDEIKELKKI 370
Query: 369 EKLIGKKLP----EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDED 419
EK+IG K+P FP E + + +++V + + N+ R++ G D
Sbjct: 371 EKVIGIKIPVLSTTFPLSEPQPEVKVKQVKKRHK--------RNNRPRKRPGQSD 417
>gi|424902637|ref|ZP_18326153.1| ATP-dependent RNA helicase 2 [Burkholderia thailandensis MSMB43]
gi|390933012|gb|EIP90412.1| ATP-dependent RNA helicase 2 [Burkholderia thailandensis MSMB43]
Length = 482
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L++P IE A + T+ Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRDPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + S +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVAAAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIVELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRTL 380
>gi|255533359|ref|YP_003093731.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346343|gb|ACU05669.1| DEAD/DEAH box helicase domain protein [Pedobacter heparinus DSM
2366]
Length = 437
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 224/368 (60%), Gaps = 1/368 (0%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L + ++ A + G+ P+ IQ +AIP L+ +DL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FKELNLIEPILNALQTEGYTQPTPIQEQAIPSILQNRDLLGCAQTGTGKTAAFAIPMLQL 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + N + A VL+PTRELAIQI E F+A G + +R V+ GGV QT AL
Sbjct: 63 LSKPHTNTKIHKVIKALVLTPTRELAIQIEESFKAYGKNLPIRHLVIFGGVGQKAQTDAL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I+VATPGRL+D L N +L ++ VLDEADR+L+ F + +++ +P R
Sbjct: 123 HRGVDILVATPGRLLD-LMNQGFINLRDIEIFVLDEADRMLDMGFIHDVKKVIAKLPAKR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT FSATM K+++ L L NPVK+E ST + ++Q+ +V K L++IL
Sbjct: 182 QTLFFSATMPKEIQGLADTILTNPVKVEVTPVSSTAEKIRQEIFYVEKGDKKGLLMHILQ 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ + + +VF RT + L +G +A I G+ SQ+ R AL FKA IL+
Sbjct: 242 DKTIETALVFARTKHGADRIVKDLIKVGVKAEAIHGNKSQNARQRALTNFKAKTTRILVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + VINY++P + Y+HR+GRT RAG +G A+S + E E+ IE
Sbjct: 302 TDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGLSGTALSFCDAEEKEFLDDIE 361
Query: 370 KLIGKKLP 377
KLIG KLP
Sbjct: 362 KLIGLKLP 369
>gi|296824810|ref|XP_002850715.1| ATP-dependent RNA helicase DBP8 [Arthroderma otae CBS 113480]
gi|238838269|gb|EEQ27931.1| ATP-dependent RNA helicase DBP8 [Arthroderma otae CBS 113480]
Length = 527
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 264/444 (59%), Gaps = 34/444 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + + K P+ IQ IP ++G+D IG ++TGSGKT AFA PIL
Sbjct: 99 SFASLGLAPWLVSSLKAMEIKRPTAIQKCCIPEIIKGRDCIGGSRTGSGKTVAFAAPILH 158
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E FA VL+PTRELA+QI EQ +A+ + SL+ ++ GG DM Q +
Sbjct: 159 KWSEDPF------GIFAVVLTPTRELALQIFEQIKAISAPQSLKPLLITGGSDMRPQAIG 212
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEI---L 182
L +RPHIV+ATPGRL DH+ ++ ++ LK +VLDEADRLL+ L ++ L
Sbjct: 213 LSQRPHIVIATPGRLADHIKSSGEDTIVGLKRVRMVVLDEADRLLSSGPGSMLPDVETCL 272
Query: 183 NVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPVKI-EAASKYSTVD-TLKQQYRFV 235
+ +P RQT LF+AT+T +V+ L+ RA + P+ + E +++ +T+ TLKQ Y V
Sbjct: 273 SALPPSTNRQTLLFTATVTPEVRALKSMPRAKNRPPIFVTEISTENTTIPPTLKQSYLQV 332
Query: 236 PAKYKDCYLVYILTEV--SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P +++ +L +L+ S+ ST++F LL MLR L R + + QS+R+
Sbjct: 333 PLNHREAFLHVLLSTEGNSSKSTIIFCNRTKTADLLERMLRRLSHRVTSLHSLLPQSERV 392
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
L++F+A +L+ TDVA+RGLDIPSV +VIN+D+P N DYIHRVGRTARAGR G A
Sbjct: 393 ANLSRFRASAARLLVATDVAARGLDIPSVGLVINFDVPRNPDDYIHRVGRTARAGREGEA 452
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
I+LV Q +++ L IE +GK++ + EE V L E++ + +K+ G+ +R
Sbjct: 453 ITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNL------ESRIVKSTVLKEVGSTKRE 504
Query: 414 KGG--DEDDDIGRQFGINKKKLSK 435
G DE DI G +KL K
Sbjct: 505 AMGEIDEGRDI---LGRRVRKLKK 525
>gi|170725067|ref|YP_001759093.1| DEAD/DEAH box helicase [Shewanella woodyi ATCC 51908]
gi|169810414|gb|ACA84998.1| DEAD/DEAH box helicase domain protein [Shewanella woodyi ATCC
51908]
Length = 494
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 220/371 (59%), Gaps = 7/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL +++A G+ TPS IQA+AIP LEGKD++ AQTG+GKT F LP
Sbjct: 2 SFTSLGLSAPILKAVAQKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLP--- 58
Query: 69 ALLEIAENQRTVPA--FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LLE+ + PA A VL+PTRELA Q++E E G + LR AV+ GGV + Q
Sbjct: 59 -LLELLSRGKRAPAKQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGVGIGPQI 117
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
LGK I+VATPGRL+D L N S L+ LVLDEADR+L+ F + +IL ++P
Sbjct: 118 SKLGKGVDILVATPGRLLD-LYNQGAVSFKQLEVLVLDEADRMLDMGFIHDIKKILKILP 176
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQ +FSAT + ++ L + + NPV+I + +T T++Q V K K L++
Sbjct: 177 AKRQNLMFSATFSDDIRNLAKGLVNNPVEISVTPRNATAKTVEQYIYPVDQKQKTAALIH 236
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ + +VF+RT +A L G A I G+ SQ R AL FK+GE +
Sbjct: 237 LVKQNEWKQVLVFSRTKHGANRIAKNLEASGLTAAAIHGNKSQGARTKALANFKSGEVRV 296
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RG+DI + V+N+D+P +DY+HR+GRT RAG G A+SLV+ E +
Sbjct: 297 LVATDIAARGIDIDQLPNVVNFDLPNVPEDYVHRIGRTGRAGANGQAVSLVSGDESKLLR 356
Query: 367 QIEKLIGKKLP 377
IE+LI + +P
Sbjct: 357 DIERLIKQNIP 367
>gi|254236843|ref|ZP_04930166.1| hypothetical protein PACG_02863 [Pseudomonas aeruginosa C3719]
gi|126168774|gb|EAZ54285.1| hypothetical protein PACG_02863 [Pseudomonas aeruginosa C3719]
Length = 449
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKVELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++++
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLMV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|237747736|ref|ZP_04578216.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229379098|gb|EEO29189.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 469
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 244/405 (60%), Gaps = 17/405 (4%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K F++ GL ++++A +++G+ +P+ IQ +AIP LEGKD++G AQTG+GKT ++LP+L
Sbjct: 15 KKFEDFGLSPDILKALDDLGYVSPTPIQVQAIPLVLEGKDVMGAAQTGTGKTAGYSLPML 74
Query: 68 QALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
Q+LL + N PA A +L PTRELA Q+ E + ++ AV+ GGVD+
Sbjct: 75 QSLL-FSANTSMSPARHPVRALILVPTRELADQVFEDVKRYAKYTPVKSAVVFGGVDISS 133
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
QT L I++ATPGRL+DH+ K +L + LVLDEADR+L+ F L I+N+
Sbjct: 134 QTSILRAGVEILIATPGRLLDHVQQ-KNVNLSHTQILVLDEADRMLDMGFLPDLQRIVNL 192
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ RQ LFSAT + +KKL R+ +K+PV +E A + +T + +KQ + K+ +
Sbjct: 193 LPKQRQNLLFSATFSNDIKKLARSFMKDPVTVEVARQNATAENVKQTVYRIEESEKNAAV 252
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
++L + + ++F+ T LA L G +A I G +Q++R+ L FK+G
Sbjct: 253 EHLLKDRNQEQVLIFSNTKAGASRLARQLERKGMKASAIHGDKTQAERMATLEAFKSGSI 312
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+IL+ TDVA+RGL I + VIN+D+P ++DY+HR+GRT RAG G AISL ++ +
Sbjct: 313 DILVATDVAARGLHIEELPCVINFDLPFVAEDYVHRIGRTGRAGSKGEAISLYSEKDERL 372
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN 409
+IEKL ++LP LE++T+ +R ++ + G
Sbjct: 373 LKEIEKLTKRQLP------------LEKLTDFEREKHVSPETGGT 405
>gi|389690958|ref|ZP_10179851.1| DNA/RNA helicase, superfamily II [Microvirga sp. WSM3557]
gi|388589201|gb|EIM29490.1| DNA/RNA helicase, superfamily II [Microvirga sp. WSM3557]
Length = 502
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/376 (41%), Positives = 230/376 (61%), Gaps = 17/376 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELGL D++ +A G+ P+ IQA+AIPH L +D++G+AQTG+GKT AF LP+L
Sbjct: 2 SFAELGLSDKVQQAVAAAGYTEPTPIQAQAIPHVLSRRDVLGIAQTGTGKTAAFTLPML- 60
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LLE + +P +L PTRELA Q+ E F+ G L A+L+GGV Q
Sbjct: 61 TLLETGRARARMPR--TLILEPTRELAAQVEENFDKYGVNHKLSVALLIGGVSFGDQDAK 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ + +++ATPGRL+DH K L ++ LV+DEADR+L+ F ++ I+ ++P
Sbjct: 119 ITRGVDVLIATPGRLLDHFERGK-LLLTGVELLVIDEADRMLDMGFIPDIERIVKLVPFT 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM ++++L A L NPVK+E A ST T+ Q R V +D L
Sbjct: 178 RQTLFFSATMPPEIQRLADAFLHNPVKVEVARAASTASTITQ--RLVATGREDYEKRETL 235
Query: 249 TEVSASST-----MVFTRTCDATRLLALMLRNL---GQRAIPISGHMSQSKRLGALNKFK 300
E+ +T +VF C+ R +A++ R+L G A+ + G M Q R+ AL+ F+
Sbjct: 236 RELIRGATDLQNAIVF---CNRKRDVAVLHRSLQKHGFDAVALHGDMDQHARMAALDSFR 292
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+GE IL+ +DVA+RGLDIP+V V NYDIP +++DY+HR+GRT RAGR+G + +LV
Sbjct: 293 SGEMPILVASDVAARGLDIPAVSHVFNYDIPHHAEDYVHRIGRTGRAGRSGQSFTLVGPG 352
Query: 361 ELEWYLQIEKLIGKKL 376
+ + IEKLIG+ +
Sbjct: 353 DEKSLAAIEKLIGQPI 368
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 228/383 (59%), Gaps = 9/383 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A E TF GL +++ A G+ P+ IQA AIP + G+D++G AQTG+GKT
Sbjct: 9 APANESVTFDTFGLHPDILRALAESGYTRPTPIQAAAIPVVVAGRDVMGAAQTGTGKTAG 68
Query: 62 FALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
F+LPI+Q LL A N PA A +L+PTRELA Q+ + G +LR AV+ G
Sbjct: 69 FSLPIIQNLLPEA-NTSASPARHPVRALILTPTRELADQVYDNVAKYGKYTALRSAVVFG 127
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
GVDM QT L + I+VATPGRL+DH+ + +L ++ LVLDEADR+L+ F L
Sbjct: 128 GVDMNPQTEQLRRGVEILVATPGRLLDHVQQ-RSVNLSQVRMLVLDEADRMLDMGFLPDL 186
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
I+N++P RQT LFSAT + ++KKL + L++P IE A +T D ++Q VP
Sbjct: 187 QRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDG 246
Query: 239 YKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
+K LV++L + + S +VF+ + LA L G A I G +Q++R+
Sbjct: 247 HKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQTERMQ 306
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
L FK G ++L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+
Sbjct: 307 TLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDAL 366
Query: 355 SLVNQYELEWYLQIEKLIGKKLP 377
SL + IEKLI + LP
Sbjct: 367 SLFAPGDERLLADIEKLIKRNLP 389
>gi|171685610|ref|XP_001907746.1| hypothetical protein [Podospora anserina S mat+]
gi|170942766|emb|CAP68419.1| unnamed protein product [Podospora anserina S mat+]
Length = 798
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 223/366 (60%), Gaps = 13/366 (3%)
Query: 1 MAEEKEVK-------TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQ 53
A+E +VK +F E+ L +++ +VG+ P+ IQ++ IP AL GKD++G A
Sbjct: 259 FADEDDVKQEKGVHSSFLEMSLSRPILKGLNSVGFTKPTPIQSKTIPIALMGKDVVGGAV 318
Query: 54 TGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRC 113
TGSGKTGAF +PIL+ LL + V +L+PTRELAIQ L S ++
Sbjct: 319 TGSGKTGAFLVPILERLLY---RSKKVATTRVVILAPTRELAIQCHAVGVKLASHTDIKF 375
Query: 114 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 173
+ VGG+ + Q L RP +V+ATPGR +DH+ N+ F++ T++ LVLDEADR+L D
Sbjct: 376 CLAVGGLSLKVQEQELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDG 435
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY- 232
F L+EIL +P+ RQT LFSATMT V +L RA L PV+I+ S+ T L+Q++
Sbjct: 436 FADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIQVDSQKKTASNLRQEFV 495
Query: 233 RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
R P + K YLV+I + ++F R ++ LG + G M+Q+
Sbjct: 496 RLRPGREKKRMGYLVHICKTLYTERVIIFFRQKKIAHETRIIFGLLGMSCAELHGSMNQA 555
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
+R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P N + YIHR+GRTARAGR+
Sbjct: 556 QRIASVEAFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQNLEIYIHRIGRTARAGRS 615
Query: 351 GVAISL 356
GVA++L
Sbjct: 616 GVALTL 621
>gi|452877593|ref|ZP_21954868.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa VRFPA01]
gi|452185681|gb|EME12699.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa VRFPA01]
Length = 447
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT AFALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGLHTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAAFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHGSIRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K ++VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDVLVATPGRLLD-LYRQNAVQFARLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLAGELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG TG A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGATGQALSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|367004050|ref|XP_003686758.1| hypothetical protein TPHA_0H01160 [Tetrapisispora phaffii CBS 4417]
gi|357525060|emb|CCE64324.1| hypothetical protein TPHA_0H01160 [Tetrapisispora phaffii CBS 4417]
Length = 433
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 242/422 (57%), Gaps = 23/422 (5%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK LGL LVEA + TP+ IQ+ IP L G+D IG A+TGSGKT AFA P+L
Sbjct: 4 KSFKSLGLSKWLVEALNAMRISTPTAIQSNCIPAILNGRDCIGGAKTGSGKTVAFAAPML 63
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
E F +L+PTRELA+QI+EQF ALG+ +++R ++VGG +++Q L
Sbjct: 64 TKWSEDPS------GMFGVILTPTRELAMQIAEQFTALGASMNIRICLVVGGESIVKQAL 117
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNV 184
L K+PH ++ATPGRL H+ + ++G L K+LVLDEAD LL F K L +
Sbjct: 118 ELQKKPHFIIATPGRLAHHIMASGEDTVGGLIRTKFLVLDEADILLTSTFSKDLAVCIQK 177
Query: 185 IPRM--RQTYLFSATMTKKVKKLQRAC---LKNPVKIEAASKYSTV---DTLKQQYRFVP 236
+P RQT LF+AT+T +V+ LQ A K P+ TV TLK +Y VP
Sbjct: 178 LPAKDKRQTLLFTATITDQVRALQNAPTQEYKPPLYCYEVGTVDTVAIPSTLKVEYLLVP 237
Query: 237 AKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
K+ YL +LT SS +VF +L LR L R + + Q +R
Sbjct: 238 DYVKEAYLYQLLTCETYKDSSAIVFVNRTATAEVLRRTLRELEIRVTSLHSQLPQQERTN 297
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
+L +F+A +LI TDVA+RGLDIP V++VINYDIP + +IHR GRTARAGR G AI
Sbjct: 298 SLQRFRANAARVLIATDVAARGLDIPIVELVINYDIPQDPDTFIHRSGRTARAGRKGDAI 357
Query: 355 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTI--KDSGNK 410
S V ++ IE+ I KK+ + + ++ L +VT+AKR S M + ++ G K
Sbjct: 358 SFVTPRDITRIQSIEERINKKMEKCDKVHDTAVIRKALTKVTKAKRESLMAMEKENFGEK 417
Query: 411 RR 412
RR
Sbjct: 418 RR 419
>gi|152986565|ref|YP_001346544.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PA7]
gi|150961723|gb|ABR83748.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PA7]
Length = 447
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 225/380 (59%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT AFALP+LQ
Sbjct: 2 TFASLGLLDPLLKALEGLGLHTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAAFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHGSIRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K ++VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDVLVATPGRLLD-LYRQNAVQFARLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLAGELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG TG A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGATGQALSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|421467479|ref|ZP_15916098.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC BAA-247]
gi|400233671|gb|EJO63196.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC BAA-247]
Length = 487
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 250 QLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|408419813|ref|YP_006761227.1| ATP-dependent RNA helicase RhlE2 [Desulfobacula toluolica Tol2]
gi|405107026|emb|CCK80523.1| RhlE2: predicted ATP-dependent RNA helicase [Desulfobacula
toluolica Tol2]
Length = 439
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 246/411 (59%), Gaps = 11/411 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELGLR EL++A ++ G+ P+ IQ AIP L G+D++ AQTG+GKT AFALP+++
Sbjct: 2 SFDELGLRVELLKASKSKGYTAPTPIQTRAIPAILNGRDILARAQTGTGKTDAFALPLIE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+L + +R P A VL+PTRELA+Q+ E +A +S+RC V+ GGV++ Q
Sbjct: 62 -ILSRKKVKRRYPR--ALVLTPTRELALQVGESIKAYARRVSIRCTVVYGGVNITPQIDR 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL+D L + + L +++LV DEADR+L+ F + + EIL +P
Sbjct: 119 LKRGIDILVATPGRLLD-LASHRDLDLSRIEFLVFDEADRMLDLGFSEEISEILEFVPTE 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T LFSAT T++++ L + L+ P IE + +++ Q+ V K L++++
Sbjct: 178 RRTMLFSATYTQQIRNLAQIMLQEPDYIEVTPSNTAAESIVQKVHLVDKPNKRALLIHLI 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
T + +VF RT L L G A + G+ SQS R L +FK G L+
Sbjct: 238 TTGHWTQILVFVRTKHGANKLTEKLVAKGISAAALHGNKSQSFRTRTLKEFKNGVIRTLV 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI ++ V+NYDIP+ +DYIHR+GRT RAG +G+A+SLV+ E I
Sbjct: 298 ATDVAARGLDISNLPYVVNYDIPSVPEDYIHRIGRTGRAGVSGIAVSLVSPDERPHLKAI 357
Query: 369 EKLIGKKLPEFPAEE-------EEVLLLLERVTEAKRISQMTIKDSGNKRR 412
EKL+ +K+P+ P + + +LL +++ + IK+ NKR+
Sbjct: 358 EKLLKQKIPKEPIDHYTMDGTVPDFVLLRPNNPSSEKKADKQIKEIVNKRK 408
>gi|226947893|ref|YP_002802984.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A2 str.
Kyoto]
gi|226840806|gb|ACO83472.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A2 str.
Kyoto]
Length = 425
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/414 (40%), Positives = 248/414 (59%), Gaps = 15/414 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+GKDL+G AQTG+GKT AFA+PILQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPILQN 62
Query: 70 LLE---IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L + + +N RT+ A VL+PTRELAIQI E FE G I+L+ AV+ GGV QT
Sbjct: 63 LSKDKKVNKNPRTIRAL---VLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQT 119
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL + I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P
Sbjct: 120 KALREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R RQ LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L +
Sbjct: 179 RGRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSLLKH 238
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L + S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +
Sbjct: 239 LLKDESIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRV 298
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E +
Sbjct: 299 LVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEETKSLK 358
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
IEKLI K++P ++ R + + K++ NK+ +R+GG+
Sbjct: 359 AIEKLIHKEIPVVEDHPYKI-----RHINEDEVKKENTKNNYNKKPSSKRQGGN 407
>gi|298482320|ref|ZP_07000507.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|298271607|gb|EFI13181.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
Length = 374
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 224/368 (60%), Gaps = 2/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL + + +++A E G+ P+ IQ +AIP AL +D++G AQTG+GKT +FA+PI+Q
Sbjct: 2 TFKELNITEPILKAIEEKGYTVPTPIQEKAIPPALAKRDILGCAQTGTGKTASFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E R A +L+PTRELA+QISE + +R V+ GGV+ Q
Sbjct: 62 HLQLDKEAARR-QGIKALILTPTRELALQISECIDDYSKHTRIRHGVIFGGVNQRPQVDL 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D +T L T++Y VLDEADR+L+ F + IL +P+
Sbjct: 121 LRKGIDILVATPGRLLDLMTQGH-IHLDTIQYFVLDEADRMLDMGFIHDIKRILPKLPKE 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT FSATM + L ++ LKNPVKI K STVD++KQ FV K K L+ IL
Sbjct: 180 KQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSSTVDSIKQVVYFVEKKEKSQLLISIL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ S ++F+RT + +L G + I G+ SQ+ R AL FK+G+ +++
Sbjct: 240 SKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRG+DI + +VINYD+P + Y+HR+GRT RAG G A++ +Q E + I
Sbjct: 300 ATDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNMGTALTFCSQEERKLVNDI 359
Query: 369 EKLIGKKL 376
+KL GKKL
Sbjct: 360 QKLTGKKL 367
>gi|319763758|ref|YP_004127695.1| dead/deah box helicase domain-containing protein [Alicycliphilus
denitrificans BC]
gi|330823978|ref|YP_004387281.1| DEAD/DEAH box helicase [Alicycliphilus denitrificans K601]
gi|317118319|gb|ADV00808.1| DEAD/DEAH box helicase domain protein [Alicycliphilus denitrificans
BC]
gi|329309350|gb|AEB83765.1| DEAD/DEAH box helicase domain protein [Alicycliphilus denitrificans
K601]
Length = 480
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 158/372 (42%), Positives = 227/372 (61%), Gaps = 5/372 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
+ + L L + L A ++G++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+L
Sbjct: 3 QPYSTLALAEPLKRAVADMGYENMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLL 62
Query: 68 QALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
Q LL+ EN PA A VL PTRELA Q+++Q LR V+ GG+DM
Sbjct: 63 QRLLK-HENSSASPARHPVRALVLLPTRELADQVAQQIAMYAKYTKLRSTVVFGGMDMKP 121
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
QT L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+
Sbjct: 122 QTAELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY 180
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P+ R T LFSAT + ++K+L + L++PV IE A T T++Q++ V K +
Sbjct: 181 LPKQRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARPNETASTVEQRFFSVQDDDKRRAI 240
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
++LTE +F + LA L G + + G SQ +RL AL FK+G+
Sbjct: 241 RHVLTERGLKQAFIFVNSKLGCARLARSLERDGLKTAALHGDKSQDERLKALEAFKSGDV 300
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
++L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++LV +
Sbjct: 301 DLLVCTDVAARGLDIKDVPAVFNHDVPFNAEDYVHRIGRTGRAGASGLAVTLVGSGDARL 360
Query: 365 YLQIEKLIGKKL 376
IEKLI KK+
Sbjct: 361 VADIEKLIKKKV 372
>gi|157376983|ref|YP_001475583.1| DEAD/DEAH box helicase [Shewanella sediminis HAW-EB3]
gi|157319357|gb|ABV38455.1| DEAD/DEAH box helicase domain protein [Shewanella sediminis
HAW-EB3]
Length = 513
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 223/376 (59%), Gaps = 3/376 (0%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A + +F LGL +++A G+ TPS IQA+AIP LEGKD++ AQTG+GKT
Sbjct: 17 APRDQSMSFTSLGLSAPILKAVAQKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAG 76
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
F LP+L+ L N+ A VL+PTRELA Q++E E G + LR AV+ GGV
Sbjct: 77 FTLPLLELLTR--GNRAQAKQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVVFGGVG 134
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
+ Q LGK I+VATPGRL+D L N + + L+ L+LDEADR+L+ F + +I
Sbjct: 135 IGPQISKLGKGVDILVATPGRLLD-LFNQRALNFNQLEVLILDEADRMLDMGFIHDIKKI 193
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L V+P RQ +FSAT + ++KL + + NPV+I + +T T++Q V K K
Sbjct: 194 LKVLPAKRQNLMFSATFSDDIRKLAKGLVNNPVEISVTPRNATAKTVEQYIYQVDQKQKT 253
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
L++++ + +VF+RT +A L A I G+ SQ R AL FK+
Sbjct: 254 AALIHLIKQNDWKQVLVFSRTKHGANRIAKNLEANDLTAAAIHGNKSQGARTKALANFKS 313
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
GE +L+ TD+A+RG+DI + V+N+D+P +DY+HR+GRT RAG G A+SLV+ E
Sbjct: 314 GEVRVLVATDIAARGIDIDQLPNVVNFDLPNVPEDYVHRIGRTGRAGADGQAVSLVSGDE 373
Query: 362 LEWYLQIEKLIGKKLP 377
+ IE+LI +K+P
Sbjct: 374 SKLLRDIERLIKQKIP 389
>gi|194337138|ref|YP_002018932.1| DEAD/DEAH box helicase [Pelodictyon phaeoclathratiforme BU-1]
gi|194309615|gb|ACF44315.1| DEAD/DEAH box helicase domain protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 418
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 226/370 (61%), Gaps = 6/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK L + D +++A + G+ TP+ IQAEAIP L+G DL+G AQTG+GKT AFA+PILQ
Sbjct: 3 FKSLEIIDPILQALQEEGYTTPTPIQAEAIPIILQGTDLLGCAQTGTGKTAAFAIPILQL 62
Query: 70 LLE--IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L E + + +R + +++PTRELAIQI E F A G L V+ GGV+ QT
Sbjct: 63 LSENKVYDKKRKIRTL---IVTPTRELAIQIGESFNAYGRHTGLTNTVIFGGVNQNPQTA 119
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL + IV+ATPGRL+D L N SL ++ LVLDEADR+L+ F + +IL V+P+
Sbjct: 120 ALIRGVDIVIATPGRLLD-LLNQGFLSLRHVEILVLDEADRMLDMGFIHDIKKILAVVPK 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
+Q+ FSATM ++ KL L NP K+ STV+ + Q FV K+ LV I
Sbjct: 179 QKQSLFFSATMPAEIVKLAATILHNPSKVSVTPVSSTVEIINQSIYFVDKGNKNSLLVDI 238
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + + + +VFTRT + +L +A I G+ +Q+ R AL FKA +L
Sbjct: 239 LRDQAIKTALVFTRTKHGADKVVKILEKHNIKAEAIHGNKAQNARQRALFNFKAQTTRVL 298
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RG+D+ ++ VIN+++P ++ Y+HR+GRT RAG G A+S + E E+
Sbjct: 299 VATDIAARGIDVDDLEYVINFEMPNIAETYVHRIGRTGRAGAKGTALSFCDAEEKEYLRD 358
Query: 368 IEKLIGKKLP 377
IEKLI KK+P
Sbjct: 359 IEKLIAKKIP 368
>gi|424834031|ref|ZP_18258749.1| ATP-dependent RNA helicase RhlE [Clostridium sporogenes PA 3679]
gi|365979266|gb|EHN15331.1| ATP-dependent RNA helicase RhlE [Clostridium sporogenes PA 3679]
Length = 425
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/413 (40%), Positives = 248/413 (60%), Gaps = 13/413 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLE---IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L + + +N RT+ A VL+PTRELAIQI E FE G I+L+ AV+ GGV QT
Sbjct: 63 LSKDKKVNKNPRTIRAL---VLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQT 119
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL + I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P
Sbjct: 120 KALREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
++RQ LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L +
Sbjct: 179 KVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSLLKH 238
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L + S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G +
Sbjct: 239 LLKDESIDSALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGNIRV 298
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E +
Sbjct: 299 LVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEETKSLK 358
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK--RRRKGGD 417
IEKLI K++P EE + + E + + T +S K +R+GG+
Sbjct: 359 AIEKLIHKEIPVV----EEHPYKIRHINEDEVKEENTNNNSNKKPSSKRQGGN 407
>gi|221199585|ref|ZP_03572629.1| dead/deah box helicase [Burkholderia multivorans CGD2M]
gi|221205515|ref|ZP_03578530.1| dead/deah box helicase [Burkholderia multivorans CGD2]
gi|221174353|gb|EEE06785.1| dead/deah box helicase [Burkholderia multivorans CGD2]
gi|221180870|gb|EEE13273.1| dead/deah box helicase [Burkholderia multivorans CGD2M]
Length = 487
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 250 QLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|182677108|ref|YP_001831254.1| DEAD/DEAH box helicase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632991|gb|ACB93765.1| DEAD/DEAH box helicase domain protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 484
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 234/374 (62%), Gaps = 14/374 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL +++++A G+ +P+ IQAEAIPHAL G+D++G+AQTG+GKT AF LP+L
Sbjct: 2 TFNELGLSEKVLQAVAATGYTSPTPIQAEAIPHALAGRDILGIAQTGTGKTAAFTLPML- 60
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ LE + +P +L PTRELA Q+ E F G L A+L+GGV +Q
Sbjct: 61 SRLEQGRARARMPR--TLILEPTRELAAQVEESFARYGINHKLNVALLIGGVSFAEQENK 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ + +++ATPGRL+D K G ++ LV+DEADR+L+ F ++ I ++P
Sbjct: 119 IMRGADVLIATPGRLLDFSERGKLLLTG-IEILVIDEADRMLDMGFIPDIERICKLVPFT 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQ---QYRFVPAKYKDCYLV 245
RQT FSATM ++ +L L NPV+IE A ST T+ Q PAK ++
Sbjct: 178 RQTLFFSATMPPEITRLTETFLHNPVRIEVARASSTATTITQGLVASAHGPAK-RETLRQ 236
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNL---GQRAIPISGHMSQSKRLGALNKFKAG 302
I + + ++F C+ R +A++ ++L G A + G M Q R+ +L+ FK+G
Sbjct: 237 LIRGAENLKNAIIF---CNRKRDVAVLHKSLQKHGFSAGALHGDMDQRARMTSLDAFKSG 293
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ N+L+C+DVA+RGLDIP V V N+D+PT+++DY+HR+GRT RAGR+GVA+S+V +
Sbjct: 294 DVNLLVCSDVAARGLDIPDVSHVFNFDVPTHAEDYVHRIGRTGRAGRSGVALSIVTSADR 353
Query: 363 EWYLQIEKLIGKKL 376
++ +IEKLI +K+
Sbjct: 354 KYVDEIEKLIARKI 367
>gi|429211643|ref|ZP_19202808.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
gi|428156125|gb|EKX02673.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
Length = 443
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 224/369 (60%), Gaps = 2/369 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL + L+ A + +G++ P+ +QA+AIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFAALGLIEPLLRALDGLGYQNPTPVQAQAIPAVLKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL+ Q + A VL PTRELA Q+ + F A G + LR AV GGV + Q +
Sbjct: 62 KLLQEGP-QVAANSVRALVLVPTRELAEQVHDSFRAYGQHVPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K ++VATPGRL+D L L+ LVLDEADR+L+ F + L+E+ +P+
Sbjct: 121 LRKGVDVLVATPGRLLD-LYRQNALKFTQLQVLVLDEADRMLDLGFARELEEVFAALPKR 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
QT LFSAT ++ ++++ L++P+ IE A + + T+KQQ V K K +++L
Sbjct: 180 HQTLLFSATFSEAIRQMAGGLLRDPLSIEVAPRNTAAKTVKQQLITVDKKRKAELFLHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T L +L+ G A I G Q RL AL +FK GE + L+
Sbjct: 240 QARRWRQALVFAKTRKGVDELVGVLQAEGIAADSIHGDKPQPARLRALQRFKDGEVDFLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E++ I
Sbjct: 300 ATDVAARGLDIEQMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQALSLVCADEVQQLAAI 359
Query: 369 EKLIGKKLP 377
E LIG+ LP
Sbjct: 360 ETLIGQLLP 368
>gi|221211662|ref|ZP_03584641.1| ATP-dependent RNA helicase RhlE [Burkholderia multivorans CGD1]
gi|221169023|gb|EEE01491.1| ATP-dependent RNA helicase RhlE [Burkholderia multivorans CGD1]
Length = 495
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 250 QLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|161524137|ref|YP_001579149.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC 17616]
gi|160341566|gb|ABX14652.1| DEAD/DEAH box helicase domain protein [Burkholderia multivorans
ATCC 17616]
Length = 509
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 34 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 93
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 94 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 152
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 153 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 211
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 212 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 271
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 272 QLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 331
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 332 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 391
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 392 ADIEKLIKRPL 402
>gi|339492846|ref|YP_004713139.1| ATP-dependent RNA helicase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338800218|gb|AEJ04050.1| ATP-dependent RNA helicase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 441
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 227/374 (60%), Gaps = 12/374 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L+ E + ++ P+ +QAEAIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLIDPLLRTLETLDYRKPTPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALL----EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L ++A N + A VL PTRELA Q+ E F G + LR + GGV +
Sbjct: 62 RLTMEGAKVASN-----SVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINP 116
Query: 125 QTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K ++VATPGRL+D + N GF+ L+ LVLDEADR+L+ F + LD + +
Sbjct: 117 QMMALRKGIDVLVATPGRLLDLYRQNAVGFA--QLQALVLDEADRMLDLGFAEELDALFS 174
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ RQT LFSAT ++ ++++ R L++P+ +E + + + T+KQ V K K
Sbjct: 175 ALPKKRQTLLFSATFSEAIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSEL 234
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+++L E +VF +T L L+ G + I G Q+ RL AL +FKAGE
Sbjct: 235 FLHLLAERRWGQVLVFVKTRKGVDQLVDELQAQGIASDAIHGDKPQASRLRALERFKAGE 294
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVA+RGLDI + V+N+D+P ++DY+HR+GRT RAG +G AISLV E++
Sbjct: 295 VQVLVATDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGASGEAISLVAADEVD 354
Query: 364 WYLQIEKLIGKKLP 377
IE LI + LP
Sbjct: 355 QLAAIETLINQVLP 368
>gi|189351106|ref|YP_001946734.1| ATP-dependent RNA helicase [Burkholderia multivorans ATCC 17616]
gi|189335128|dbj|BAG44198.1| ATP-dependent RNA helicase [Burkholderia multivorans ATCC 17616]
Length = 487
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 250 QLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|74317119|ref|YP_314859.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
gi|74056614|gb|AAZ97054.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
Length = 460
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 170/411 (41%), Positives = 237/411 (57%), Gaps = 16/411 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL +++ A + +G+ +P+ IQA+ IP AL+G D++G AQTG+GKT AFALP++Q
Sbjct: 3 TFAELGLAPDILRALDEMGYVSPTPIQAQVIPRALQGGDILGAAQTGTGKTAAFALPLIQ 62
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N T PA A +L+PTRELAIQ+ E +A + LR V+ GGV++ Q
Sbjct: 63 RLLPFA-NTSTSPAKHPIRALILTPTRELAIQVEEAIQAYTKHVPLRSLVVYGGVNINTQ 121
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L I+VATPGRL+DH+ N K L + LVLDEADR+L+ F L I+ ++
Sbjct: 122 IPILKTGVEILVATPGRLLDHVQN-KTLMLTQVNTLVLDEADRMLDMGFMPDLRRIVALL 180
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P R +FSAT ++++KL + L P IE A + V T+ Q V + K L
Sbjct: 181 PAQRVNMMFSATFPEEIRKLADSILSTPTFIEVARNETAV-TVTQVVHPVHHERKRQLLA 239
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+++ +VFT T LA L G A I G +Q +R+ AL+ FKAG
Sbjct: 240 HLIKSRDLRQVLVFTGTKLGCNRLANELNKAGIHADAIHGDKTQQERIKALDAFKAGTIR 299
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RG+DI ++ V+NYD+P N++DY+HR+GRT RAG G AISLV++ E +
Sbjct: 300 VLVATDVAARGIDIEALPFVVNYDLPHNAEDYVHRIGRTGRAGAKGEAISLVSEAETRYL 359
Query: 366 LQIEKLIGKKL-----PEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
IE+LIG L P F +V R A R S D G +R
Sbjct: 360 KDIERLIGTPLEPVIVPGFEPGAADVPAFESRPARAPRSS-----DRGRER 405
>gi|386019450|ref|YP_005937474.1| ATP-dependent RNA helicase [Pseudomonas stutzeri DSM 4166]
gi|327479422|gb|AEA82732.1| ATP-dependent RNA helicase [Pseudomonas stutzeri DSM 4166]
Length = 441
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 227/374 (60%), Gaps = 12/374 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L+ E + ++ P+ +QAEAIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLIDPLLRTLETLDYRKPTPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALL----EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L ++A N + A VL PTRELA Q+ E F G + LR + GGV +
Sbjct: 62 RLTMEGAKVASN-----SVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINP 116
Query: 125 QTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K ++VATPGRL+D + N GF+ L+ LVLDEADR+L+ F + LD + +
Sbjct: 117 QMMALRKGIDVLVATPGRLLDLYRQNAVGFA--QLQALVLDEADRMLDLGFAEELDALFS 174
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ RQT LFSAT ++ ++++ R L++P+ +E + + + T+KQ V K K
Sbjct: 175 ALPKKRQTLLFSATFSEPIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSEL 234
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+++L E +VF +T L L+ G + I G Q+ RL AL +FKAGE
Sbjct: 235 FLHLLAERRWGQVLVFVKTRKGVDQLVDELQAQGIASDAIHGDKPQASRLRALERFKAGE 294
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVA+RGLDI + V+N+D+P ++DY+HR+GRT RAG +G AISLV E++
Sbjct: 295 VQVLVATDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGASGEAISLVAADEVD 354
Query: 364 WYLQIEKLIGKKLP 377
IE LI + LP
Sbjct: 355 QLAAIETLINQVLP 368
>gi|254251800|ref|ZP_04945118.1| DEAD/DEAH box helicase-like [Burkholderia dolosa AUO158]
gi|124894409|gb|EAY68289.1| DEAD/DEAH box helicase-like [Burkholderia dolosa AUO158]
Length = 511
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 222/371 (59%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
F + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 34 NFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 93
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 94 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 152
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 153 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 211
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 212 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 271
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L E +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 272 QLLRERGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQALDAFKRGEVE 331
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 332 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 391
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 392 ADIEKLIKRPL 402
>gi|257093622|ref|YP_003167263.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046146|gb|ACV35334.1| DEAD/DEAH box helicase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 491
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 226/366 (61%), Gaps = 5/366 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL +L+ A + G+ P+ IQA+AIP L G+DL+G AQTG+GKT AF LP+LQ
Sbjct: 3 FDDLGLAPDLLRAIADQGYAEPTPIQAQAIPIVLAGQDLMGGAQTGTGKTAAFTLPLLQR 62
Query: 70 LLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+L A + PA +L+PTRELAIQ+ E + LR A + GGVD+ Q
Sbjct: 63 ILPFASASLS-PARHPVRVLMLAPTRELAIQVHESVRGYSKYVPLRSACVYGGVDIKPQI 121
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+ ++VATPGRL+D L + + G+++ LVLDEADR+L+ F + I+N++P
Sbjct: 122 AEIRLGVEVLVATPGRLLD-LIEQRCLNFGSVQALVLDEADRMLDMGFIPDVTRIINLLP 180
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ+ LFSAT ++++KKL LK+PV IE A + + +T+ + V A+ K LV
Sbjct: 181 QQRQSLLFSATFSEEIKKLADRMLKSPVLIEVARRNTVSETITHRVHPVAAEAKRALLVK 240
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L + +VFTRT T LA L+ G A I G SQ +RL AL FK G +
Sbjct: 241 LLRSSDFNQVLVFTRTKIETNKLARELQRAGIAADSIHGDKSQQERLKALEAFKDGSVLV 300
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VIN+++P +DYIHR+GRT RAG+ G A+SLV+ E+ + +
Sbjct: 301 LVATDVAARGLDIDELPHVINFELPRTPEDYIHRIGRTGRAGKPGTAVSLVSASEVPYLV 360
Query: 367 QIEKLI 372
IEKLI
Sbjct: 361 DIEKLI 366
>gi|374366617|ref|ZP_09624693.1| RNA helicase [Cupriavidus basilensis OR16]
gi|373101750|gb|EHP42795.1| RNA helicase [Cupriavidus basilensis OR16]
Length = 577
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 229/396 (57%), Gaps = 20/396 (5%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
+++ +F ELGL D+L+ A G+ TP+ IQA+AIP L+G DL+ AQTG+GKT F
Sbjct: 7 KRQFMSFSELGLSDKLMRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFT 66
Query: 64 LPILQAL------LEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLV 117
LP+LQ L E A QR A VL+PTRELA Q+ E G + LR V+
Sbjct: 67 LPLLQLLSESSAGREPARGQRL--PVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMF 124
Query: 118 GGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKS 177
GGV + Q L + IVVATPGRL+DHL+ + L ++ LVLDEADR+L+ F
Sbjct: 125 GGVGINPQIEQLKRGVDIVVATPGRLLDHLSQ-RTIDLSHVEMLVLDEADRMLDMGFIHD 183
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+ +ILNV+P RQ LFSAT + +++ L L NP IE A + +T +T+ Q+ V
Sbjct: 184 IRKILNVLPPKRQNLLFSATFSDEIRGLADRLLDNPASIEVARRNTTAETVAQRVYPVDR 243
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
+ K L +++ E +VFTRT LA L G A+ I G+ SQS R AL
Sbjct: 244 ERKRELLAHLVRENDWHQVLVFTRTKHGANRLAEQLDKDGLSALAIHGNKSQSARTRALT 303
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FKAG +L+ TD+A+RG+DI + V+NYD+P +DY+HR+GRT RAG G AISLV
Sbjct: 304 EFKAGTLRLLVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGAEGEAISLV 363
Query: 358 NQYELEWYLQIEKLIGKKL-----------PEFPAE 382
E+ IE+LI +++ P PAE
Sbjct: 364 CVDEISLMRDIERLIKRQIEQTILPGFEVDPSIPAE 399
>gi|167761792|ref|ZP_02433919.1| hypothetical protein BACSTE_00133 [Bacteroides stercoris ATCC
43183]
gi|167700298|gb|EDS16877.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 372
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 222/368 (60%), Gaps = 4/368 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+L + + +++A E G+ P+ IQ +AIP AL GKD++G AQTG+GKT AFA+PI+Q
Sbjct: 2 TFKDLNITEPILKAIEEKGYANPTPIQVKAIPAALTGKDILGCAQTGTGKTAAFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +++ A +L+PTRELA+QISE + +R V+ GGV+ Q
Sbjct: 62 HLQVLKNRDKSIKAL---ILTPTRELALQISECIDDYAKYTQVRHGVIFGGVNQRAQVNM 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L N L +++ VLDEADR+L+ F + +L +P+
Sbjct: 119 LHKGVDILVATPGRLLD-LMNQGYIHLDNVRHFVLDEADRMLDMGFIHDIKRLLPKLPKE 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT FSATM + L + LK PVKI K STVDT++Q FV K K L+ IL
Sbjct: 178 KQTLFFSATMPDTIIALTNSLLKQPVKITITPKSSTVDTIEQTIYFVEKKEKSKLLISIL 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VF+RT + +L G + I G+ SQ+ R AL FK G+ ++I
Sbjct: 238 HKTEGQSVLVFSRTKHNADRIVRVLSKAGIGSQAIHGNKSQNARQSALENFKTGKIRVMI 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + +VINYD+P + Y+HR+GRT RAG G A++ +Q E + I
Sbjct: 298 ATDIAARGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNLGTALTFCSQEERKLVNDI 357
Query: 369 EKLIGKKL 376
+KL GKKL
Sbjct: 358 QKLTGKKL 365
>gi|167569331|ref|ZP_02362205.1| ATP-dependent RNA helicase RhlE [Burkholderia oklahomensis C6786]
Length = 411
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 227/372 (61%), Gaps = 5/372 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A + G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIADQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + +++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEVLIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A +T + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNATATNVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + + +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRALKQVIVFCNSKIGASRLARQIERDGIVASAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P +++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIVELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKLP 377
IEKLI + LP
Sbjct: 370 ADIEKLIKRALP 381
>gi|357384570|ref|YP_004899294.1| ATP-dependent RNA helicase [Pelagibacterium halotolerans B2]
gi|351593207|gb|AEQ51544.1| ATP-dependent RNA helicase [Pelagibacterium halotolerans B2]
Length = 459
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 229/373 (61%), Gaps = 13/373 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL D++ EA G+ P+ IQA+AIPH LE KDLIG+AQTG+GKT +F LP+L +
Sbjct: 5 FSELGLGDKVTEAVAAAGYTKPTDIQAQAIPHVLEKKDLIGIAQTGTGKTASFVLPML-S 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LLE + +P +L PTRELA Q+ E FE G L A+L+GGV Q L
Sbjct: 64 LLEKGRARARMPR--TLILEPTRELAAQVHENFEKYGKNHRLTVALLIGGVSFEDQNKKL 121
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ +++ATPGR++DH + L + LV+DEADR+L+ F ++ I +++P R
Sbjct: 122 DRGADVLIATPGRMLDHFERGR-LLLTGVDILVIDEADRMLDMGFIPDIERICSLLPPRR 180
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFV---PAKYKDCYLVY 246
QT FSATM +++KL + L++PVK+E A + ST DT++Q V PA+ +
Sbjct: 181 QTLFFSATMPPEIQKLTQRFLRDPVKVEVARQNSTADTIEQVLLKVGKTPAEKRAALRDQ 240
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNL---GQRAIPISGHMSQSKRLGALNKFKAGE 303
I + ++F C+ R +A + R+L G A + G M Q R L++F++G
Sbjct: 241 IRAAKDLKNAIIF---CNRKRDVATVARSLERHGFDAGALHGDMDQKSRTETLDRFRSGS 297
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
IL+ +DVA+RGLDIP+V V N+D+PT+++DY+HR+GRT RAGR+G AI+L+ E +
Sbjct: 298 LAILVASDVAARGLDIPAVSHVFNFDVPTHAEDYVHRIGRTGRAGRSGTAITLIAPGETK 357
Query: 364 WYLQIEKLIGKKL 376
+ I KLI + +
Sbjct: 358 YVDAITKLIQRDI 370
>gi|90424330|ref|YP_532700.1| DEAD/DEAH box helicase-like protein [Rhodopseudomonas palustris
BisB18]
gi|90106344|gb|ABD88381.1| DEAD/DEAH box helicase-like [Rhodopseudomonas palustris BisB18]
Length = 503
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/384 (39%), Positives = 229/384 (59%), Gaps = 13/384 (3%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M + +F LGL D+++ A G+ TP+ IQ +AIPH L +D++G+AQTG+GKT
Sbjct: 1 MPNNRGSMSFTHLGLSDKVLAAVAATGYTTPTPIQDQAIPHVLARRDVLGIAQTGTGKTA 60
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AF LP+L LLE + +P +L PTRELA Q+ EQF+ G+G L A+L+GGV
Sbjct: 61 AFVLPML-TLLEKGRARARMPR--TLILEPTRELAAQVKEQFDKYGAGQKLNVALLIGGV 117
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
Q + L + +++ATPGRL+DH T G L ++ LV+DEADR+L+ F ++
Sbjct: 118 SFGDQDIKLTRGVDVLIATPGRLLDH-TERGGLLLTGVELLVIDEADRMLDMGFIPDIER 176
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFV---PA 237
I ++P RQT F+ATM +++++ L NPVKIE + ST T+ Q P
Sbjct: 177 ICKLVPFTRQTLFFTATMPNEIRRITETFLHNPVKIEVSKPASTAVTVTQSQVATGREPH 236
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS---GHMSQSKRLG 294
+ ++ + + ++F C+ R +AL+ ++L + + G M QS R
Sbjct: 237 EKRETLRRLLRDAKDLQNAIIF---CNRKREVALLAKSLEKHGFSVGALHGDMEQSARTA 293
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
AL++F+ GE IL+ +DVA+RGLDIP V VIN+D+P + DY+HR+GRT RAGR G AI
Sbjct: 294 ALDQFRKGELPILVASDVAARGLDIPEVSHVINFDVPHHPDDYVHRIGRTGRAGRAGTAI 353
Query: 355 SLVNQYELEWYLQIEKLIGKKLPE 378
S+V + + IEKLIG+ +P+
Sbjct: 354 SIVCPSDTKSIAAIEKLIGQDIPK 377
>gi|431928590|ref|YP_007241624.1| DNA/RNA helicase [Pseudomonas stutzeri RCH2]
gi|431826877|gb|AGA87994.1| DNA/RNA helicase, superfamily II [Pseudomonas stutzeri RCH2]
Length = 441
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 227/374 (60%), Gaps = 12/374 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L+ E + ++ P+ +Q EAIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLIDPLLRTLETLDYRKPTPVQIEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALL----EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L ++A N + A VL PTRELA Q+ E F G + LR + GGV +
Sbjct: 62 RLTMEGAKVASN-----SVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINP 116
Query: 125 QTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K ++VATPGRL+D + N GF+ L+ LVLDEADR+L+ F LD++ +
Sbjct: 117 QMMALRKGIDVLVATPGRLLDLYRQNAVGFN--QLQALVLDEADRMLDLGFADELDQLFS 174
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ RQT LFSAT ++ ++++ R L++P+ +E + + + T+KQ V K K
Sbjct: 175 ALPKKRQTLLFSATFSEAIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSEL 234
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+++L E +VF +T L L+ G + I G Q+ RL AL +FKAGE
Sbjct: 235 FLHLLAEKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGE 294
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVA+RGLDI + V+N+D+P ++DY+HR+GRT RAG TG A+SLV+ E++
Sbjct: 295 VQVLVATDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVD 354
Query: 364 WYLQIEKLIGKKLP 377
IE LI + LP
Sbjct: 355 QLAAIETLINQVLP 368
>gi|392947743|ref|ZP_10313371.1| ATP-dependent RNA helicase [Lactobacillus pentosus KCA1]
gi|334881219|emb|CCB82055.1| ATP-dependent RNA helicase [Lactobacillus pentosus MP-10]
gi|339637663|emb|CCC16621.1| ATP-dependent RNA helicase [Lactobacillus pentosus IG1]
gi|392437023|gb|EIW14919.1| ATP-dependent RNA helicase [Lactobacillus pentosus KCA1]
Length = 526
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/381 (43%), Positives = 225/381 (59%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL D L++A + G++ + IQAE IP LEGKD+IG AQTG+GKT AFALPILQ
Sbjct: 3 FTELGLSDSLLKAVQRAGYEEATPIQAETIPMVLEGKDVIGQAQTGTGKTAAFALPILQR 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L N A V+SPTRELAIQ E+ LG + V+ GG D+ +Q L
Sbjct: 63 LDFNNHN------IQALVVSPTRELAIQTQEEIFRLGKDERAKVQVVYGGADIRRQIRNL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ P ++V TPGRL+DH+ L +K LVLDEAD +LN F + ++ I+ +P R
Sbjct: 117 KQNPQVIVGTPGRLLDHIRRGT-VKLDHVKMLVLDEADEMLNMGFLEDIESIIKQVPDER 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM ++K++ +K P ++ SK T DT+ Q Y V AK ++ ++ L
Sbjct: 176 QTMLFSATMPPEIKRIGVQFMKEPHHVKIKSKEMTADTVDQYY--VKAKEFEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V A T+VF RT L+ L G A I G +SQ +R + +FKAG+ +IL
Sbjct: 234 FDVQAPELTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRTQIMRQFKAGKLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLD+ V V NYDIP + Y+HR+GRT RAG GV+++ V E+E+
Sbjct: 294 VATDVAARGLDVSGVTHVYNYDIPQDPDSYVHRIGRTGRAGHKGVSLTFVTPNEMEYLRV 353
Query: 368 IEKLIGKK-LPEFPAEEEEVL 387
IEKL K+ LP P E E
Sbjct: 354 IEKLTKKRMLPLKPPTESEAF 374
>gi|421615849|ref|ZP_16056868.1| ATP-dependent RNA helicase [Pseudomonas stutzeri KOS6]
gi|409782031|gb|EKN61598.1| ATP-dependent RNA helicase [Pseudomonas stutzeri KOS6]
Length = 441
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 229/374 (61%), Gaps = 12/374 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL D L+ E + ++ P+ +QAEAIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFATLGLIDPLLRTLETLDYRKPTPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 69 AL-LE---IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L LE +A N + A VL PTRELA Q+ E F A G + LR + GGV +
Sbjct: 62 RLTLEGARVASN-----SVRALVLVPTRELAEQVHESFRAYGQDLPLRTYAVYGGVSINP 116
Query: 125 QTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K ++VATPGRL+D + N GF+ L+ LVLDEADR+L+ F LD++ +
Sbjct: 117 QMMALRKGIDVLVATPGRLLDLYRQNAVGFN--QLQALVLDEADRMLDLGFADELDQLFS 174
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+P+ RQT LFSAT ++ ++++ R L++P+ IE + + + T++Q V K K
Sbjct: 175 ALPKKRQTLLFSATFSEPIRQMARELLRDPLSIEVSPRNAAAKTVRQWLVPVDKKRKSEL 234
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
++L + +VF +T L L+ G + I G Q+ RL AL +FKAGE
Sbjct: 235 FQHLLAQKRWGQVLVFVKTRKGVDQLVDELQAAGIASDAIHGDKPQASRLRALERFKAGE 294
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVA+RGLDI + V+N+D+P ++DY+HR+GRT RAG TG A+SLV+ E++
Sbjct: 295 VQVLVATDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVD 354
Query: 364 WYLQIEKLIGKKLP 377
IE LI + LP
Sbjct: 355 QLAAIETLINQVLP 368
>gi|421477961|ref|ZP_15925746.1| DEAD/DEAH box helicase [Burkholderia multivorans CF2]
gi|400225606|gb|EJO55753.1| DEAD/DEAH box helicase [Burkholderia multivorans CF2]
Length = 487
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 250 QLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|86134655|ref|ZP_01053237.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85821518|gb|EAQ42665.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 438
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 221/368 (60%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK LGL D V+A E G+ PS IQ +AIPH LEGKD++ AQTG+GKT F LP+LQ
Sbjct: 2 SFKSLGLSDAFVKAVEEKGYTKPSPIQEKAIPHILEGKDVLASAQTGTGKTAGFTLPVLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E ++ + P A VL+PTRELA Q+ + ++++ AV+ GGV Q
Sbjct: 62 YLSE-TKHPKYRP-IRALVLTPTRELAAQVHDNVREYSKYVNIKSAVVFGGVKAASQIAT 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL+D L + K S + +LDEADR+L+ F + +++I++ +P
Sbjct: 120 LKRGVDILVATPGRLLD-LHDQKAVSFKRIDVFILDEADRMLDMGFVRDINKIISYMPAK 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ +FSAT +K++KKL LKNPV++E A + ST + + + K K + + ++
Sbjct: 179 RQNLMFSATFSKEIKKLASGILKNPVEVETAPQNSTAKKVSHKVYQIDKKKKTEFTIKLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + + ++FTRT L L A I G+ SQ R AL FK +L+
Sbjct: 239 KDNNWNQVLIFTRTKHGANRLTQNLIKSKISAAAIHGNKSQGARTKALKNFKDNTIKVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDIP + VINY++P +DY+HR+GRT RAG G AISLV E E+ +I
Sbjct: 299 ATDIAARGLDIPLLPYVINYELPNVPEDYVHRIGRTGRAGAKGEAISLVCSEETEYQKEI 358
Query: 369 EKLIGKKL 376
EKL+ +KL
Sbjct: 359 EKLLNEKL 366
>gi|447911698|ref|YP_007393110.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
gi|445187407|gb|AGE29049.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
Length = 503
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 231/381 (60%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I +++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRQELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +KNP ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF-PAEEEEVL 387
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKEAF 374
>gi|167562078|ref|ZP_02354994.1| ATP-dependent RNA helicase RhlE [Burkholderia oklahomensis EO147]
Length = 408
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 227/372 (61%), Gaps = 5/372 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL E+++A + G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIADQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A LR AV+ GGVDM Q
Sbjct: 72 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + +++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEVLIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A +T + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNATATNVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + + +VF + LA + G A I G SQS+R+ AL+ FK GE
Sbjct: 250 KLIRDRALKQVIVFCNSKIGASRLARQIERDGIVASAIHGDRSQSERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P +++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIVELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKLP 377
IEKLI + LP
Sbjct: 370 ADIEKLIKRALP 381
>gi|302656972|ref|XP_003020220.1| ATP-dependent RNA helicase, putative [Trichophyton verrucosum HKI
0517]
gi|291184030|gb|EFE39602.1| ATP-dependent RNA helicase, putative [Trichophyton verrucosum HKI
0517]
Length = 528
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 263/443 (59%), Gaps = 32/443 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + + K P+ IQ IP ++G+D IG ++TGSGKT AFA PIL
Sbjct: 100 SFSSLGLAPWLVSSLKAMEIKRPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAAPILH 159
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E +A +L+PTRELA+QI EQ +A+ + SL+ ++ GG DM Q +
Sbjct: 160 KWSEDPF------GIYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIG 213
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYLVLDEADRLLNDDFEKSLDEI---L 182
L +RPHIV+ATPGRL DH+ ++ L ++ +VLDEADRLL L ++ L
Sbjct: 214 LSQRPHIVIATPGRLADHIKSSGEDTIIGLKRVRMVVLDEADRLLTSGPGSMLPDVETCL 273
Query: 183 NVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPVKI-EAASKYSTVD-TLKQQYRFV 235
+ +P RQT LF+AT+T +V+ L+ RA K P+ + E +++ +T+ TLKQ Y V
Sbjct: 274 SALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKPPIFVTEISTENTTIPPTLKQTYLQV 333
Query: 236 PAKYKDCYLVYILTEV--SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P +++ +L +L+ S+ ST++F LL +LR L R + + QS+R+
Sbjct: 334 PLNHREAFLQVLLSTEGNSSKSTIIFCNRTKTADLLERILRRLSHRVTSLHSLLPQSERV 393
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
L++F+A +L+ TDVA+RGLDIPSV +VINYD+P N DYIHRVGRTARAGR G A
Sbjct: 394 ANLSRFRASAARLLVATDVAARGLDIPSVGLVINYDVPRNPDDYIHRVGRTARAGREGEA 453
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
I+LV Q +++ L IE +GK++ + EE V + E++ + +K+ G+ +R
Sbjct: 454 ITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI------ESRIVKATVLKEVGSTKRE 505
Query: 414 KGGDEDDDIGRQ-FGINKKKLSK 435
G+ D+ GR G +KL K
Sbjct: 506 AMGEIDE--GRDVLGRRVRKLKK 526
>gi|307278457|ref|ZP_07559532.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0860]
gi|306504963|gb|EFM74158.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0860]
Length = 536
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/383 (42%), Positives = 225/383 (58%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKELGL EL+ A E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L
Sbjct: 24 FKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLN- 82
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I + R + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 83 --KIDADNRVIQGL---VIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGL 137
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGRL+DH+ N + L T++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 138 KDRPHIVVGTPGRLLDHI-NRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQR 196
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K + +K P ++ +K T D + Q Y + KD I+T
Sbjct: 197 QTLLFSATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYY----VRSKDFEKFDIMT 252
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ + T+VF RT LA L G +A I G +SQ KR+ L FK G +
Sbjct: 253 RLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLD 312
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 313 ILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYL 372
Query: 366 LQIEKLIGKKL-PEFPAEEEEVL 387
IE L K++ P P E+E
Sbjct: 373 HVIENLTKKRMTPLRPPTEKEAF 395
>gi|253999448|ref|YP_003051511.1| DEAD/DEAH box helicase [Methylovorus glucosetrophus SIP3-4]
gi|313201470|ref|YP_004040128.1| dead/deah box helicase domain-containing protein [Methylovorus sp.
MP688]
gi|253986127|gb|ACT50984.1| DEAD/DEAH box helicase domain protein [Methylovorus glucosetrophus
SIP3-4]
gi|312440786|gb|ADQ84892.1| DEAD/DEAH box helicase domain protein [Methylovorus sp. MP688]
Length = 459
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/372 (44%), Positives = 235/372 (63%), Gaps = 7/372 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL E+++A E G+ P+ IQA+AIP L+G DL+ AQTG+GKT AF+LP+LQ
Sbjct: 8 FADLGLAPEILKALEEFGYTVPTPIQAQAIPVVLQGHDLMAGAQTGTGKTAAFSLPLLQK 67
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LL A + + PA A +L+PTRELAIQ+ E + +LR V+ GGVD+ QT
Sbjct: 68 LLPQASSSAS-PARHPVRALILTPTRELAIQVEESVKVYAKHTALRSLVVFGGVDIKTQT 126
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
+L K I+VATPGRL+DH+ + LG ++ L+LDEADR+L+ F L IL ++P
Sbjct: 127 PSLMKGVEILVATPGRLLDHVEQ-RTVQLGQVQMLILDEADRMLDMGFMPDLKRILALLP 185
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ +FSAT + +KKL L NP IE A + D + Q+ + KD +L
Sbjct: 186 KKRQNLMFSATFSNDIKKLSEEFLTNPKLIEVARSNAASDKVTQKVYQLDKDSKDSFLAK 245
Query: 247 ILTEVSASSTMVFTRT-CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L E ++ T+VFT+T A+RL ++R G A I G SQ +R+ AL FK G+
Sbjct: 246 LLLESNSEQTIVFTKTKLTASRLARQLVRE-GIAADAIHGDKSQQERMQALEAFKQGKVT 304
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + MVIN+++P+ +DY+HR+GRT RAG +G AISLV E ++
Sbjct: 305 TLVATDVAARGLDIDQLPMVINFELPSAPEDYVHRIGRTGRAGASGTAISLVCPEEEKYL 364
Query: 366 LQIEKLIGKKLP 377
+IEKLI +++P
Sbjct: 365 KEIEKLIKREIP 376
>gi|170691820|ref|ZP_02882984.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
gi|170143104|gb|EDT11268.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
Length = 493
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/371 (43%), Positives = 229/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A + G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ ++ +LR AV+ GGVDM Q
Sbjct: 72 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVQSYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L++P IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVTQIVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E S +VF + LA L G A I G +Q++R+ AL+ FK GE
Sbjct: 250 QLIRERSLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQNERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|149179168|ref|ZP_01857736.1| ATP-dependent RNA helicase [Planctomyces maris DSM 8797]
gi|148841986|gb|EDL56381.1| ATP-dependent RNA helicase [Planctomyces maris DSM 8797]
Length = 445
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/373 (41%), Positives = 222/373 (59%), Gaps = 6/373 (1%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
+ TF+EL L + +A +K P+ IQA+ IP ALEG+D++G AQTG+GKT A ALPI
Sbjct: 1 MNTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPI 60
Query: 67 LQALLEIAENQR-TVPAF-FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
L ++ +N R ++P A VL+PTRELAIQI + F+A G + LR ++ GGV
Sbjct: 61 LN---QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGN 117
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q AL + HI+VATPGRL+D L N L L+ VLDEADR+L+ F L I+
Sbjct: 118 QVKALKRGAHILVATPGRLLD-LMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQ 176
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYL 244
+P RQ+ FSAT+ K+ +L + L PV + K ++V+ ++QQ FV +K L
Sbjct: 177 LPTQRQSLFFSATLAPKITELAHSLLSKPVTVNVTPKTTSVEKIQQQLMFVERNFKQPLL 236
Query: 245 VYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
IL +VFT+T L+ L G +A I G+ SQ R AL F+ +
Sbjct: 237 QKILGGDEVERALVFTKTKRTANTLSQRLVRSGFKATAIHGNKSQGARQQALEAFRRKQV 296
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+L+ TDVA+RG+DI + VIN+D+P + Y+HR+GRT RAG G+AIS ++ E +
Sbjct: 297 QVLVATDVAARGIDIDGITHVINFDLPVEPEAYVHRIGRTGRAGANGIAISFCSESERKE 356
Query: 365 YLQIEKLIGKKLP 377
IE+LIG+K+P
Sbjct: 357 LRSIERLIGQKVP 369
>gi|257885750|ref|ZP_05665403.1| helicase [Enterococcus faecium 1,231,501]
gi|257821606|gb|EEV48736.1| helicase [Enterococcus faecium 1,231,501]
Length = 503
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 230/381 (60%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +KNP ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEVTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF-PAEEEEVL 387
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKEAF 374
>gi|264679797|ref|YP_003279706.1| hypothetical protein CtCNB1_3664 [Comamonas testosteroni CNB-2]
gi|262210312|gb|ACY34410.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 453
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 221/359 (61%), Gaps = 5/359 (1%)
Query: 26 VGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF- 84
+G+++ + IQA+AIP L GKD++G AQTG+GKT AF+LP+LQ L+ EN PA
Sbjct: 1 MGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQRLMR-HENASASPARHP 59
Query: 85 --ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGR 142
A VL PTRELA Q+++Q LR V+ GG+DM QT+ L K ++VATPGR
Sbjct: 60 VRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGR 119
Query: 143 LMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKV 202
L+DH+ K L ++Y+VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++
Sbjct: 120 LLDHI-EAKNVVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPKSRTTLLFSATFSPEI 178
Query: 203 KKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRT 262
K+L + L++PV IE A T T++Q++ V K + +L E +F+ +
Sbjct: 179 KRLAGSYLQDPVTIEVARPNETASTVEQRFYKVTDDDKRYAIRSVLKERDIRQAFIFSNS 238
Query: 263 CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSV 322
L L G RA + G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V
Sbjct: 239 KLGCARLTRALERDGLRAAALHGDKSQDERLKALEAFKAGEVDLLVCTDVAARGLDIKDV 298
Query: 323 DMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 381
V NYD+P N++DY+HR+GRT RAG +G+A++LV ++ IEKL KK+ PA
Sbjct: 299 PAVFNYDVPFNAEDYVHRIGRTGRAGASGLAVTLVTDHDSRNVADIEKLTKKKIEVEPA 357
>gi|448820186|ref|YP_007413348.1| ATP-dependent RNA helicase [Lactobacillus plantarum ZJ316]
gi|448273683|gb|AGE38202.1| ATP-dependent RNA helicase [Lactobacillus plantarum ZJ316]
Length = 528
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/381 (43%), Positives = 224/381 (58%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL D L++A G++ + IQAE IP LEGKD+IG AQTG+GKT AFALPILQ
Sbjct: 3 FTELGLSDSLLKAVNRAGYEEATPIQAETIPMVLEGKDVIGQAQTGTGKTAAFALPILQR 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L N A V+SPTRELAIQ E+ LG + V+ GG D+ +Q L
Sbjct: 63 LDFDNHN------IQALVVSPTRELAIQTQEEIFRLGKDERAKVQVVYGGADIRRQIRNL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ P ++V TPGRL+DH+ L +K LVLDEAD +LN F + ++ I+ +P R
Sbjct: 117 KQNPQVIVGTPGRLLDHIRRGT-VKLDHVKMLVLDEADEMLNMGFLEDIESIIKQVPDER 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM ++K++ +K P ++ SK T DT+ Q Y V AK ++ ++ L
Sbjct: 176 QTMLFSATMPPEIKRIGVQFMKEPHHVKIKSKEMTADTVDQYY--VKAKEFEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V A T+VF RT L+ L G A I G +SQ +R + +FKAG+ +IL
Sbjct: 234 FDVQAPELTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRTQIMRQFKAGKLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLD+ V V NYDIP + Y+HR+GRT RAG GV+++ V E+E+
Sbjct: 294 VATDVAARGLDVSGVTHVYNYDIPQDPDSYVHRIGRTGRAGHKGVSLTFVTPNEMEYLRV 353
Query: 368 IEKLIGKK-LPEFPAEEEEVL 387
IEKL K+ LP P E E
Sbjct: 354 IEKLTKKRMLPLKPPTESEAF 374
>gi|148378643|ref|YP_001253184.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
3502]
gi|153933936|ref|YP_001383027.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
19397]
gi|153937665|ref|YP_001386574.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. Hall]
gi|148288127|emb|CAL82195.1| putative ATP-dependent RNA helicase rhle [Clostridium botulinum A
str. ATCC 3502]
gi|152929980|gb|ABS35480.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
19397]
gi|152933579|gb|ABS39078.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. Hall]
Length = 425
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 251/414 (60%), Gaps = 15/414 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+G+DL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGRDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLE---IAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L + + +N RT+ A VL+PTRELAIQI E FE G I+L+ AV+ GGV QT
Sbjct: 63 LSKDKKVNKNPRTIRAL---VLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQT 119
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL + I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P
Sbjct: 120 KALREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L +
Sbjct: 179 KARQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRALLKH 238
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L + S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +
Sbjct: 239 LLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRV 298
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E +
Sbjct: 299 LVATDIAARGIDVNELSHVFNYNLPDIPETYVHRIGRTGRAGAKGVAISFCDIEETKSLK 358
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
IEKLI K++P E+ + + E + I + KD+ N++ +R+GG+
Sbjct: 359 AIEKLINKEIPVV----EDHPYKIRHINEGE-IKKENTKDNFNEKSSTKRQGGN 407
>gi|29375434|ref|NP_814588.1| DEAD/DEAH box helicase [Enterococcus faecalis V583]
gi|227520091|ref|ZP_03950140.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
TX0104]
gi|227554958|ref|ZP_03985005.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
HH22]
gi|229546689|ref|ZP_04435414.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
TX1322]
gi|229548784|ref|ZP_04437509.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
ATCC 29200]
gi|293383725|ref|ZP_06629632.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis R712]
gi|293388799|ref|ZP_06633292.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis S613]
gi|307267925|ref|ZP_07549313.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4248]
gi|307271845|ref|ZP_07553113.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0855]
gi|307275145|ref|ZP_07556297.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2134]
gi|307286655|ref|ZP_07566741.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0109]
gi|307290778|ref|ZP_07570673.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0411]
gi|312901614|ref|ZP_07760885.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0470]
gi|312904406|ref|ZP_07763566.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0635]
gi|312907060|ref|ZP_07766056.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 512]
gi|312952884|ref|ZP_07771745.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0102]
gi|312978684|ref|ZP_07790411.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 516]
gi|384512540|ref|YP_005707633.1| ATP-dependent RNA helicase DeaD [Enterococcus faecalis OG1RF]
gi|422686078|ref|ZP_16744289.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4000]
gi|422689795|ref|ZP_16747899.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0630]
gi|422692134|ref|ZP_16750156.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0031]
gi|422694449|ref|ZP_16752440.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4244]
gi|422696585|ref|ZP_16754542.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1346]
gi|422699736|ref|ZP_16757597.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1342]
gi|422703461|ref|ZP_16761283.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1302]
gi|422707307|ref|ZP_16765002.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0043]
gi|422711628|ref|ZP_16768555.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0027]
gi|422713329|ref|ZP_16770079.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309A]
gi|422717645|ref|ZP_16774329.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309B]
gi|422720386|ref|ZP_16777004.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0017]
gi|422722778|ref|ZP_16779327.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2137]
gi|422726299|ref|ZP_16782750.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0312]
gi|422729834|ref|ZP_16786229.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0012]
gi|422731038|ref|ZP_16787419.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0645]
gi|422735346|ref|ZP_16791620.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1341]
gi|422738996|ref|ZP_16794181.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2141]
gi|424670976|ref|ZP_18107991.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
599]
gi|424676386|ref|ZP_18113259.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV103]
gi|424679344|ref|ZP_18116169.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV116]
gi|424682393|ref|ZP_18119164.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV129]
gi|424686115|ref|ZP_18122786.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV25]
gi|424689249|ref|ZP_18125835.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV31]
gi|424692828|ref|ZP_18129304.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV37]
gi|424696170|ref|ZP_18132529.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV41]
gi|424699415|ref|ZP_18135635.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV62]
gi|424703855|ref|ZP_18139979.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV63]
gi|424705957|ref|ZP_18141971.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV65]
gi|424716207|ref|ZP_18145521.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV68]
gi|424719149|ref|ZP_18148371.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV72]
gi|424722510|ref|ZP_18151560.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV73]
gi|424726330|ref|ZP_18154998.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV81]
gi|424734532|ref|ZP_18163044.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV85]
gi|424746519|ref|ZP_18174750.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV93]
gi|424757333|ref|ZP_18185087.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
R508]
gi|29342894|gb|AAO80658.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis V583]
gi|227072435|gb|EEI10398.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
TX0104]
gi|227175901|gb|EEI56873.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
HH22]
gi|229306092|gb|EEN72088.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
ATCC 29200]
gi|229308195|gb|EEN74182.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecalis
TX1322]
gi|291078801|gb|EFE16165.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis R712]
gi|291081956|gb|EFE18919.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis S613]
gi|306498159|gb|EFM67681.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0411]
gi|306502133|gb|EFM71417.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0109]
gi|306508173|gb|EFM77291.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2134]
gi|306511351|gb|EFM80353.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0855]
gi|306515566|gb|EFM84093.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4248]
gi|310627045|gb|EFQ10328.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 512]
gi|310629187|gb|EFQ12470.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0102]
gi|310632233|gb|EFQ15516.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0635]
gi|311288391|gb|EFQ66947.1| DEAD/DEAH box helicase [Enterococcus faecalis DAPTO 516]
gi|311291302|gb|EFQ69858.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0470]
gi|315027034|gb|EFT38966.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2137]
gi|315029211|gb|EFT41143.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4000]
gi|315032370|gb|EFT44302.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0017]
gi|315034370|gb|EFT46302.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0027]
gi|315145185|gb|EFT89201.1| DEAD/DEAH box helicase [Enterococcus faecalis TX2141]
gi|315148006|gb|EFT92022.1| DEAD/DEAH box helicase [Enterococcus faecalis TX4244]
gi|315149607|gb|EFT93623.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0012]
gi|315153133|gb|EFT97149.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0031]
gi|315155152|gb|EFT99168.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0043]
gi|315158764|gb|EFU02781.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0312]
gi|315163093|gb|EFU07110.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0645]
gi|315165079|gb|EFU09096.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1302]
gi|315167890|gb|EFU11907.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1341]
gi|315171750|gb|EFU15767.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1342]
gi|315174909|gb|EFU18926.1| DEAD/DEAH box helicase [Enterococcus faecalis TX1346]
gi|315574115|gb|EFU86306.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309B]
gi|315577243|gb|EFU89434.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0630]
gi|315581764|gb|EFU93955.1| DEAD/DEAH box helicase [Enterococcus faecalis TX0309A]
gi|327534429|gb|AEA93263.1| ATP-dependent RNA helicase DeaD [Enterococcus faecalis OG1RF]
gi|402356926|gb|EJU91644.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV103]
gi|402357040|gb|EJU91755.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV116]
gi|402359536|gb|EJU94161.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
599]
gi|402367689|gb|EJV02027.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV129]
gi|402368059|gb|EJV02386.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV25]
gi|402368986|gb|EJV03284.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV31]
gi|402376373|gb|EJV10318.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV62]
gi|402376784|gb|EJV10706.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV37]
gi|402378414|gb|EJV12272.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV41]
gi|402383780|gb|EJV17363.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV63]
gi|402388552|gb|EJV21987.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV68]
gi|402388773|gb|EJV22199.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV65]
gi|402397103|gb|EJV30139.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV72]
gi|402399841|gb|EJV32699.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV81]
gi|402401968|gb|EJV34706.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV73]
gi|402407406|gb|EJV39938.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
R508]
gi|402407938|gb|EJV40436.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV85]
gi|402409246|gb|EJV41678.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
ERV93]
Length = 536
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/383 (42%), Positives = 225/383 (58%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKELGL EL+ A E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L
Sbjct: 24 FKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLN- 82
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I + R + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 83 --KIDADNRVIQGL---VIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGL 137
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGRL+DH+ N + L T++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 138 KDRPHIVVGTPGRLLDHI-NRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQR 196
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K + +K P ++ +K T D + Q Y + KD I+T
Sbjct: 197 QTLLFSATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYY----VRSKDFEKFDIMT 252
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ + T+VF RT LA L G +A I G +SQ KR+ L FK G +
Sbjct: 253 RLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLD 312
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 313 ILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYL 372
Query: 366 LQIEKLIGKKL-PEFPAEEEEVL 387
IE L K++ P P E+E
Sbjct: 373 HVIENLTKKRMTPLRPPTEKEAF 395
>gi|431208676|ref|ZP_19500889.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
gi|430570682|gb|ELB09622.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
Length = 503
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 230/381 (60%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +KNP ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF-PAEEEEVL 387
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKEAF 374
>gi|170759986|ref|YP_001785987.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A3 str. Loch
Maree]
gi|169406975|gb|ACA55386.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A3 str. Loch
Maree]
Length = 425
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 247/411 (60%), Gaps = 9/411 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+G+DL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGRDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + + A VL+PTRELAIQI E FE G I+L+ AV+ GGV QT AL
Sbjct: 63 LSKDKKVNKDPRTIRALVLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQTKAL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P+ R
Sbjct: 123 REGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLPKAR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L ++L
Sbjct: 182 QNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRALLKHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +L+
Sbjct: 242 DKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E + IE
Sbjct: 302 TDIAARGIDVNELSHVFNYNLPDIPETYVHRIGRTGRAGAKGVAISFCDIEETKSLKAIE 361
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
KLI K++P E+ + + E + I + KD+ NK+ +R+GG+
Sbjct: 362 KLINKEIPVV----EDHPYKIRHINEGE-IKKENTKDNFNKKSSTKRQGGN 407
>gi|260558407|ref|ZP_05830603.1| helicase [Enterococcus faecium C68]
gi|261207113|ref|ZP_05921802.1| helicase [Enterococcus faecium TC 6]
gi|289567232|ref|ZP_06447617.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|293556891|ref|ZP_06675452.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|293567807|ref|ZP_06679148.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|294615128|ref|ZP_06695014.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|294617803|ref|ZP_06697416.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|406579294|ref|ZP_11054526.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|406581588|ref|ZP_11056725.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|406584027|ref|ZP_11059065.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|406589825|ref|ZP_11064245.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410938072|ref|ZP_11369930.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|424789110|ref|ZP_18215819.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|424953765|ref|ZP_18368708.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|424962400|ref|ZP_18376756.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|424963599|ref|ZP_18377803.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|424970725|ref|ZP_18384213.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|424978089|ref|ZP_18391038.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|425038208|ref|ZP_18442830.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|425058609|ref|ZP_18461987.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|425060636|ref|ZP_18463922.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|427397059|ref|ZP_18889685.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430820898|ref|ZP_19439518.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430823396|ref|ZP_19441967.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430826317|ref|ZP_19444503.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430828899|ref|ZP_19447010.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430834757|ref|ZP_19452759.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430836494|ref|ZP_19454473.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430839412|ref|ZP_19457353.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430843175|ref|ZP_19461076.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430850821|ref|ZP_19468578.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430853175|ref|ZP_19470905.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430858894|ref|ZP_19476513.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430861435|ref|ZP_19478942.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430866428|ref|ZP_19481705.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430892938|ref|ZP_19484559.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430952632|ref|ZP_19486438.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|431000766|ref|ZP_19488247.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|431234137|ref|ZP_19502906.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|431256501|ref|ZP_19504856.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|431303424|ref|ZP_19508271.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|431380394|ref|ZP_19510775.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|431441111|ref|ZP_19513326.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|431506774|ref|ZP_19515600.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|431725207|ref|ZP_19525416.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|431744090|ref|ZP_19532962.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|431747114|ref|ZP_19535916.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|431760196|ref|ZP_19548798.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|431765027|ref|ZP_19553551.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
gi|260075581|gb|EEW63887.1| helicase [Enterococcus faecium C68]
gi|260078741|gb|EEW66443.1| helicase [Enterococcus faecium TC 6]
gi|289160980|gb|EFD08895.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|291589392|gb|EFF21199.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|291592070|gb|EFF23693.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|291595943|gb|EFF27223.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|291600975|gb|EFF31266.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|402922578|gb|EJX42943.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|402938304|gb|EJX57320.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|402940682|gb|EJX59477.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|402948694|gb|EJX66809.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|402960765|gb|EJX77866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|402963120|gb|EJX80012.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|403019904|gb|EJY32478.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|403038013|gb|EJY49253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|403042418|gb|EJY53373.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|404455599|gb|EKA02443.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|404459354|gb|EKA05720.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|404464924|gb|EKA10437.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|404470265|gb|EKA14916.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410733711|gb|EKQ75634.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|425722385|gb|EKU85280.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430439035|gb|ELA49418.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430442109|gb|ELA52157.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430445197|gb|ELA54971.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430482561|gb|ELA59676.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430484826|gb|ELA61773.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430488294|gb|ELA64976.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430490870|gb|ELA67366.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430497924|gb|ELA73941.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430535180|gb|ELA75603.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430540997|gb|ELA81174.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430544740|gb|ELA84762.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430549900|gb|ELA89710.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430551656|gb|ELA91407.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430555404|gb|ELA94942.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430557231|gb|ELA96699.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|430562425|gb|ELB01657.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|430573163|gb|ELB11993.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|430577603|gb|ELB16190.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|430580065|gb|ELB18545.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|430582262|gb|ELB20689.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|430586467|gb|ELB24719.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|430587161|gb|ELB25394.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|430595854|gb|ELB33732.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|430605718|gb|ELB43100.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|430607222|gb|ELB44549.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|430624005|gb|ELB60656.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|430629510|gb|ELB65910.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
Length = 503
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 230/381 (60%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +KNP ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF-PAEEEEVL 387
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKEAF 374
>gi|115352406|ref|YP_774245.1| DEAD/DEAH box helicase [Burkholderia ambifaria AMMD]
gi|115282394|gb|ABI87911.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria AMMD]
Length = 497
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 224/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A SLR AV+ GGVDM Q
Sbjct: 72 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTSLRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKHGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 250 QLLRDRGLKQVLVFCNSKIGASRLARNLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|354807813|ref|ZP_09041268.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus curvatus
CRL 705]
gi|354513709|gb|EHE85701.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus curvatus
CRL 705]
Length = 523
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/383 (42%), Positives = 221/383 (57%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL + +++A E G++ + IQ E IP AL GKD+IG AQTG+GKT AF LPILQ
Sbjct: 3 FAELGLSEPIMKAIERAGFEEATPIQGETIPLALAGKDVIGQAQTGTGKTAAFGLPILQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L P A ++SPTRELAIQ E+ LG + V+ GG D+ +Q +L
Sbjct: 63 L------DLDNPNIQALIISPTRELAIQTQEELYRLGRDRKAKVQVVYGGADIRRQIRSL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
P I+V TPGRL+DH+ N + L +K LVLDEAD +L+ F ++ I+ +P R
Sbjct: 117 KDHPQILVGTPGRLLDHI-NRRTVKLDHVKTLVLDEADEMLDMGFVDDIESIIKQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSAT+ + K+ ++ + NP I+ SK T D + Q Y + KD I+T
Sbjct: 176 QTLLFSATLPAPIMKIGKSFMTNPEMIKVKSKELTADLIDQYY----VRAKDFEKFDIMT 231
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ S T++F RT L L+ G A I G +SQ KR+ L FKAG +
Sbjct: 232 RLFDVQSPELTLIFGRTKRRVDELTRGLKARGYNAEGIHGDLSQQKRMSVLKSFKAGRLD 291
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + Y+HR+GRT RAG++GV+++ V E+E+
Sbjct: 292 ILVATDVAARGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGKSGVSVTFVTPNEMEYL 351
Query: 366 LQIEKLIGKK-LPEFPAEEEEVL 387
IE L K+ LP P E+E
Sbjct: 352 HIIENLTKKRMLPLQPPTEKEAF 374
>gi|435852049|ref|YP_007313635.1| DNA/RNA helicase, superfamily II [Methanomethylovorans hollandica
DSM 15978]
gi|433662679|gb|AGB50105.1| DNA/RNA helicase, superfamily II [Methanomethylovorans hollandica
DSM 15978]
Length = 422
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 224/368 (60%), Gaps = 2/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ L ++ L A E+ G+ TP+ IQA+AIPH LE +DLIG+AQTG+GKT AF LPILQ
Sbjct: 2 SFENLKIKKTLQRALESEGYITPTPIQAQAIPHLLENRDLIGIAQTGTGKTAAFVLPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + ++ A VL+PTRELA QI + F G I R V+ GGV Q A
Sbjct: 62 KLSETNKPSKSR-APRVLVLAPTRELAAQIGDSFSTYGQFIRFRYTVVFGGVGQGPQVKA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L +++ATPGRL+D L + L +++ VLDEADR+L+ F K + I+ ++P
Sbjct: 121 LAHGVDVLIATPGRLLD-LLDQGHVKLNEVEFFVLDEADRMLDMGFIKDVYRIVPLLPVK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM+ ++ +L R L +PV +E + + +TV+ + Q FV + KD L+ +L
Sbjct: 180 RQSLFFSATMSPQIAELARKLLTSPVHVEVSPQATTVEKIDQFVFFVDQENKDNLLLGLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S +VFTRT +ALML A I G+ SQ++R A++ FK+G +L+
Sbjct: 240 QHNHLRSVLVFTRTKHRANKVALMLNKNKIEADAIHGNKSQNQRTKAMDDFKSGNVRVLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+DI + VINYD+P ++Y+HR+GRTARAG G A S E ++ I
Sbjct: 300 ATDIAARGIDIEDISHVINYDLPNEPENYVHRIGRTARAGSDGTAYSFCAADERDYLRSI 359
Query: 369 EKLIGKKL 376
EKL +++
Sbjct: 360 EKLTRQEI 367
>gi|91775610|ref|YP_545366.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
gi|91709597|gb|ABE49525.1| DEAD/DEAH box helicase-like protein [Methylobacillus flagellatus
KT]
Length = 460
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 166/373 (44%), Positives = 237/373 (63%), Gaps = 6/373 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L EL++A + G+ TP+ IQA+AIP LEG DL+ AQTG+GKT AF LP+LQ
Sbjct: 15 SFASLNLAPELLKALDESGYTTPTPIQAQAIPVVLEGSDLMAGAQTGTGKTAAFTLPLLQ 74
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL +A + + PA A +L+PTRELAIQ+ E + LR V+ GGVD+ Q
Sbjct: 75 KLLPLASSSAS-PARHPVRALILTPTRELAIQVEESVKTYAKHTPLRSLVVFGGVDIKSQ 133
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T L K I+VATPGRL+DH+ + LG ++ LVLDEADR+L+ F L IL ++
Sbjct: 134 TPTLMKGVEILVATPGRLLDHVEQ-RTVQLGQVQMLVLDEADRMLDMGFMPDLKRILALL 192
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQ +FSAT + ++KKL L PV IE A +T + + Q+ V +++K L
Sbjct: 193 PKQRQNLMFSATFSPEIKKLSEEFLTKPVLIEVARSNATSENVTQKILLVESEHKQHVLA 252
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + A+ +VFT+T + LA L G A I G SQ +R+ AL+ FK G+
Sbjct: 253 DLLRK-EATQVIVFTKTKLSASRLARHLEREGIAAGAIHGDKSQLERIQALDAFKQGKIT 311
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + MV+NY++P+ ++DY+HR+GRT RAG +G+AISLV+ E ++
Sbjct: 312 ALVATDVAARGLDIDQLPMVVNYELPSAAEDYVHRIGRTGRAGASGIAISLVSSEEEKFL 371
Query: 366 LQIEKLIGKKLPE 378
+IEKLI ++LP+
Sbjct: 372 KEIEKLIKRELPK 384
>gi|408355702|ref|YP_006844233.1| ATP-dependent RNA helicase [Amphibacillus xylanus NBRC 15112]
gi|407726473|dbj|BAM46471.1| ATP-dependent RNA helicase [Amphibacillus xylanus NBRC 15112]
Length = 483
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 228/368 (61%), Gaps = 7/368 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+EL + +++A N+G++ + IQ + IP L+G+D+IG AQTG+GKT AF +P+++
Sbjct: 3 TFQELNISAPILKALSNMGFEEATPIQEQTIPLGLKGEDVIGQAQTGTGKTAAFGIPMIE 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+I + QR + V++PTRELAIQ+SE+ +G +R + GG M +Q +
Sbjct: 63 ---QIEKKQRKIQGL---VVAPTRELAIQVSEEIHRIGKFKGIRSLPIYGGQQMQRQIRS 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + PHIVVATPGRL+DH+ K ++ +K +VLDEAD +LN F + EIL +IP
Sbjct: 117 LKEGPHIVVATPGRLLDHMRR-KTINISDVKTIVLDEADEMLNMGFIDDIREILKMIPHE 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM K+++++ ++ P +++ SK +V+ ++Q++ V K K L +L
Sbjct: 176 RQTLLFSATMPKEIRQIASTMMREPKEVKVKSKQLSVENIEQRFIEVHEKQKFDALTNLL 235
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++F RT L L+ G RA I G ++Q KR+ LNKFK G IL+
Sbjct: 236 DIHVPELAIIFGRTKKRVDELTDGLQARGFRAEGIHGDLTQGKRMSVLNKFKNGRIEILV 295
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI +V V N+DIP + + Y+HR+GRT RAG+TGVAIS + E+ I
Sbjct: 296 ATDVAARGLDISNVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAISFITPREMPHLKLI 355
Query: 369 EKLIGKKL 376
EK+ K+
Sbjct: 356 EKVTNAKV 363
>gi|257081095|ref|ZP_05575456.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis E1Sol]
gi|256989125|gb|EEU76427.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis E1Sol]
Length = 513
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/383 (42%), Positives = 225/383 (58%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKELGL EL+ A E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L
Sbjct: 3 FKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLN- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I + R + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDADNRVIQGL---VIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGRL+DH+ N + L T++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRLLDHI-NRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K + +K P ++ +K T D + Q Y + KD I+T
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYY----VRSKDFEKFDIMT 231
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ + T+VF RT LA L G +A I G +SQ KR+ L FK G +
Sbjct: 232 RLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLD 291
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 292 ILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYL 351
Query: 366 LQIEKLIGKKL-PEFPAEEEEVL 387
IE L K++ P P E+E
Sbjct: 352 HVIENLTKKRMTPLRPPTEKEAF 374
>gi|255971301|ref|ZP_05421887.1| helicase [Enterococcus faecalis T1]
gi|256617719|ref|ZP_05474565.1| helicase [Enterococcus faecalis ATCC 4200]
gi|256761605|ref|ZP_05502185.1| helicase [Enterococcus faecalis T3]
gi|256854305|ref|ZP_05559669.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis T8]
gi|256957293|ref|ZP_05561464.1| helicase [Enterococcus faecalis DS5]
gi|256959973|ref|ZP_05564144.1| helicase [Enterococcus faecalis Merz96]
gi|256964332|ref|ZP_05568503.1| helicase [Enterococcus faecalis HIP11704]
gi|257077733|ref|ZP_05572094.1| helicase [Enterococcus faecalis JH1]
gi|257083763|ref|ZP_05578124.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis Fly1]
gi|257086188|ref|ZP_05580549.1| helicase [Enterococcus faecalis D6]
gi|257089260|ref|ZP_05583621.1| helicase [Enterococcus faecalis CH188]
gi|257415413|ref|ZP_05592407.1| helicase [Enterococcus faecalis ARO1/DG]
gi|257418444|ref|ZP_05595438.1| helicase [Enterococcus faecalis T11]
gi|257421095|ref|ZP_05598085.1| ATP-dependent RNA helicase [Enterococcus faecalis X98]
gi|294781261|ref|ZP_06746607.1| DEAD/DEAH box helicase [Enterococcus faecalis PC1.1]
gi|300859873|ref|ZP_07105961.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TUSoD Ef11]
gi|384517892|ref|YP_005705197.1| DEAD/DEAH box helicase [Enterococcus faecalis 62]
gi|397699239|ref|YP_006537027.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis D32]
gi|428766354|ref|YP_007152465.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis str. Symbioflor 1]
gi|430358725|ref|ZP_19425485.1| helicase [Enterococcus faecalis OG1X]
gi|430367031|ref|ZP_19427744.1| helicase [Enterococcus faecalis M7]
gi|255962319|gb|EET94795.1| helicase [Enterococcus faecalis T1]
gi|256597246|gb|EEU16422.1| helicase [Enterococcus faecalis ATCC 4200]
gi|256682856|gb|EEU22551.1| helicase [Enterococcus faecalis T3]
gi|256709865|gb|EEU24909.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis T8]
gi|256947789|gb|EEU64421.1| helicase [Enterococcus faecalis DS5]
gi|256950469|gb|EEU67101.1| helicase [Enterococcus faecalis Merz96]
gi|256954828|gb|EEU71460.1| helicase [Enterococcus faecalis HIP11704]
gi|256985763|gb|EEU73065.1| helicase [Enterococcus faecalis JH1]
gi|256991793|gb|EEU79095.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecalis Fly1]
gi|256994218|gb|EEU81520.1| helicase [Enterococcus faecalis D6]
gi|256998072|gb|EEU84592.1| helicase [Enterococcus faecalis CH188]
gi|257157241|gb|EEU87201.1| helicase [Enterococcus faecalis ARO1/DG]
gi|257160272|gb|EEU90232.1| helicase [Enterococcus faecalis T11]
gi|257162919|gb|EEU92879.1| ATP-dependent RNA helicase [Enterococcus faecalis X98]
gi|294451597|gb|EFG20053.1| DEAD/DEAH box helicase [Enterococcus faecalis PC1.1]
gi|300850691|gb|EFK78440.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TUSoD Ef11]
gi|323480025|gb|ADX79464.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis 62]
gi|397335878|gb|AFO43550.1| DEAD/DEAH box helicase family protein [Enterococcus faecalis D32]
gi|427184527|emb|CCO71751.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus
faecalis str. Symbioflor 1]
gi|429513550|gb|ELA03129.1| helicase [Enterococcus faecalis OG1X]
gi|429516845|gb|ELA06321.1| helicase [Enterococcus faecalis M7]
Length = 515
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/383 (42%), Positives = 225/383 (58%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKELGL EL+ A E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L
Sbjct: 3 FKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLN- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I + R + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDADNRVIQGL---VIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGRL+DH+ N + L T++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRLLDHI-NRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K + +K P ++ +K T D + Q Y + KD I+T
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYY----VRSKDFEKFDIMT 231
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ + T+VF RT LA L G +A I G +SQ KR+ L FK G +
Sbjct: 232 RLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLD 291
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 292 ILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYL 351
Query: 366 LQIEKLIGKKL-PEFPAEEEEVL 387
IE L K++ P P E+E
Sbjct: 352 HVIENLTKKRMTPLRPPTEKEAF 374
>gi|172061278|ref|YP_001808930.1| DEAD/DEAH box helicase [Burkholderia ambifaria MC40-6]
gi|171993795|gb|ACB64714.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MC40-6]
Length = 511
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 224/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 34 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 93
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A SLR AV+ GGVDM Q
Sbjct: 94 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTSLRSAVVFGGVDMNPQ 152
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 153 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 211
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 212 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKHGAVV 271
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 272 QLLRDRGLKQVLVFCNSKIGASRLARNLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 331
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 332 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 391
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 392 ADIEKLIKRPL 402
>gi|254555590|ref|YP_003062007.1| ATP-dependent RNA helicase [Lactobacillus plantarum JDM1]
gi|300769652|ref|ZP_07079536.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308179612|ref|YP_003923740.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380031534|ref|YP_004888525.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
gi|418274186|ref|ZP_12889684.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum NC8]
gi|254044517|gb|ACT61310.1| ATP-dependent RNA helicase [Lactobacillus plantarum JDM1]
gi|300492805|gb|EFK27989.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308045103|gb|ADN97646.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342240777|emb|CCC78011.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
gi|376009752|gb|EHS83078.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 528
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 166/381 (43%), Positives = 224/381 (58%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL D L++A G++ + IQAE IP LEGKD+IG AQTG+GKT AFALPILQ
Sbjct: 3 FTELGLSDSLLKAVNRAGYEEATPIQAETIPMVLEGKDVIGQAQTGTGKTAAFALPILQR 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L N A V+SPTRELAIQ E+ LG + V+ GG D+ +Q L
Sbjct: 63 LDFDNHN------IQALVVSPTRELAIQTQEEIFRLGKDERAKVQVVYGGADIRRQIRNL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ P ++V TPGRL+DH+ L +K LVLDEAD +LN F + ++ I+ +P R
Sbjct: 117 KQNPQVIVGTPGRLLDHIRRGT-VKLDHVKMLVLDEADEMLNMGFLEDIESIIKQVPDER 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM ++K++ +K P ++ SK T DT+ Q Y V AK ++ ++ L
Sbjct: 176 QTMLFSATMPPEIKRIGVQFMKEPHHVKIKSKEMTADTVDQYY--VKAKEFEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V A T+VF RT L+ L G A I G +SQ +R + +FKAG+ +IL
Sbjct: 234 FDVQAPELTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRTQIMRQFKAGKLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLD+ V V NYDIP + Y+HR+GRT RAG GV+++ V E+E+
Sbjct: 294 VATDVAARGLDVSGVTHVYNYDIPQDPDSYVHRIGRTGRAGHKGVSLTFVTPNEMEYLRV 353
Query: 368 IEKLIGKK-LPEFPAEEEEVL 387
IEKL K+ LP P E E
Sbjct: 354 IEKLTKKRMLPLKPPTESEAF 374
>gi|424869804|ref|ZP_18293485.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
gi|402935190|gb|EJX54460.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
Length = 501
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 230/381 (60%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +KNP ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF-PAEEEEVL 387
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKEAF 374
>gi|255973920|ref|ZP_05424506.1| helicase [Enterococcus faecalis T2]
gi|255966792|gb|EET97414.1| helicase [Enterococcus faecalis T2]
Length = 515
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/383 (42%), Positives = 225/383 (58%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKELGL EL+ A E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L
Sbjct: 3 FKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLN- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I + R + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDADNRVIQGL---VIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGRL+DH+ N + L T++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRLLDHI-NRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K + +K P ++ +K T D + Q Y + KD I+T
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYY----VRSKDFEKFDIMT 231
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ + T+VF RT LA L G +A I G +SQ KR+ L FK G +
Sbjct: 232 RLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLD 291
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 292 ILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYL 351
Query: 366 LQIEKLIGKKL-PEFPAEEEEVL 387
IE L K++ P P E+E
Sbjct: 352 HVIENLTKKRMTPLRPPTEKEAF 374
>gi|255079330|ref|XP_002503245.1| predicted protein [Micromonas sp. RCC299]
gi|226518511|gb|ACO64503.1| predicted protein [Micromonas sp. RCC299]
Length = 605
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 225/381 (59%), Gaps = 9/381 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F EL L LV+AC +G+ +P+ IQA +P AL G+D+ G A TGSGKT AF LP L+
Sbjct: 152 FTELNLSRPLVKACGALGYASPTPIQAAVVPLALTGRDICGRAVTGSGKTAAFMLPCLER 211
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+L + V A VL PTRELA+Q+ + E L S+R A++VGG+ Q +L
Sbjct: 212 MLH--RGPKPVAATHVLVLVPTRELAVQVHQMTERLAQFTSVRAALVVGGLSANVQATSL 269
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RP +VVATPGRL+DH+ NT L L LVLDEADRLL F + + EI+ P+ R
Sbjct: 270 RSRPEVVVATPGRLIDHVRNTHSVGLEDLATLVLDEADRLLEMGFLEEIREIVRHCPKRR 329
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVP--AKYKDCYLVY 246
QT LFSAT+T V++L +KNP ++ A +T TL ++ R P A K+ +L+
Sbjct: 330 QTMLFSATLTSGVEELAEFSMKNPARLSADQIGTTPGTLTEEVLRLRPGAAAMKEAHLLA 389
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
I+ ++F+RT L +++ G +A + G ++Q++RL AL +F+ GE
Sbjct: 390 IVARTFTKRCIIFSRTKQQAHRLKIIMGIHGLKACELHGDLTQTQRLAALEEFRTGEATH 449
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
++ TDVA+RGLDI VD V++YD P Y+HRVGRTARAGR G A++ + + + +
Sbjct: 450 MVATDVAARGLDIAGVDAVVSYDAPRTLASYLHRVGRTARAGRKGTALTFMEESDRKLIK 509
Query: 367 QI----EKLIGKKLPEFPAEE 383
+ KL+ + LP E+
Sbjct: 510 AVSKRGSKLVARSLPTHVVED 530
>gi|188591276|ref|YP_001795876.1| ATP-dependent RNA helicase hydrolase [Cupriavidus taiwanensis LMG
19424]
gi|170938170|emb|CAP63156.1| ATP-dependent RNA helicase hydrolase [Cupriavidus taiwanensis LMG
19424]
Length = 516
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/374 (43%), Positives = 222/374 (59%), Gaps = 7/374 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELGL +++V A G+ TP+ IQA+AIP L+G DL+ AQTG+GKT F LP+LQ
Sbjct: 2 SFSELGLSEKIVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQ 61
Query: 69 ALLEIAENQRTVP------AFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
L E A Q A A VL+PTRELA Q+ E G + LR V+ GGV +
Sbjct: 62 LLSETAARQAGGAQRGGRVAVRALVLTPTRELAAQVEESVRNYGKYLRLRSMVMFGGVGI 121
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
Q L + IVVATPGRL+DH++ + L ++ LVLDEADR+L+ F + +IL
Sbjct: 122 NPQIEQLKRGVEIVVATPGRLLDHVSQ-RTIDLSQVELLVLDEADRMLDMGFIHDIRKIL 180
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
NV+P RQ LFSAT + ++ L L NP IE A + +T +T+ Q+ V + K
Sbjct: 181 NVLPAKRQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVDQRVYPVDRERKRE 240
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
L +++ + +VFTRT LA L G A+ I G+ SQS R AL++FKAG
Sbjct: 241 LLAHLVRQHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAG 300
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+L+ TD+A+RG+DI + V+N+D+P +DY+HR+GRT RAG G AISLV EL
Sbjct: 301 TLRLLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEL 360
Query: 363 EWYLQIEKLIGKKL 376
IE+LI +KL
Sbjct: 361 GLLRDIERLIKRKL 374
>gi|336469774|gb|EGO57936.1| hypothetical protein NEUTE1DRAFT_81992 [Neurospora tetrasperma FGSC
2508]
Length = 830
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 218/355 (61%), Gaps = 6/355 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E+ +F+E+ L ++ +VG+ P+ IQA+ IP +L GKD++G A TGSGKT AF +P
Sbjct: 292 EMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 351
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
IL+ LL + VP +L+PTRELAIQ L S ++ + VGG+ + Q
Sbjct: 352 ILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQ 408
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L RP +V+ATPGR +DH+ N+ F++ T++ LVLDEADR+L D F L+EIL +
Sbjct: 409 EAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTL 468
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAK--YKDC 242
P+ RQT LFSATMT V +L RA L PV+I A S+ T TL Q++ R P + ++
Sbjct: 469 PKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPGRESKREG 528
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL++I + ++F R + ++ G + G M+Q++R+ ++ F+ G
Sbjct: 529 YLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVEDFRDG 588
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRVGRTARAGR+G AI+L
Sbjct: 589 KVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLA 643
>gi|385333348|ref|YP_005887299.1| DEAD/DEAH box helicase [Marinobacter adhaerens HP15]
gi|311696498|gb|ADP99371.1| DEAD/DEAH box helicase domain protein [Marinobacter adhaerens HP15]
Length = 440
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 221/369 (59%), Gaps = 4/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL ++LV A + G++TPS IQA+AIP L G+D++ AQTG+GKT F LP+LQ
Sbjct: 2 SFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L EN RT A +L+PTRELA Q+ + I + AV+ GGV + Q +
Sbjct: 62 RL---GENPRTGKGPRALILTPTRELAAQVHDSVNLYSKYIPTKAAVVFGGVKINPQMMK 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K ++VATPGRLMD L ++ LVLDEADR+L+ F + + +IL+++P
Sbjct: 119 LRKGLDVLVATPGRLMD-LYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILSLLPAK 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT + +++ L L NPV++E A++ ++ + +KQ V K L ++
Sbjct: 178 RQNLLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALLSKLV 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VFTRT L L G A I G+ SQ R AL FKAGE +L+
Sbjct: 238 RDNSWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLV 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+++P +DY+HR+GRT RAG +G A+SLV+ E + I
Sbjct: 298 ATDIAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAGI 357
Query: 369 EKLIGKKLP 377
E+LI K+LP
Sbjct: 358 ERLIKKQLP 366
>gi|238028205|ref|YP_002912436.1| ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
gi|237877399|gb|ACR29732.1| Putative ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
Length = 480
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 227/375 (60%), Gaps = 5/375 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A + G+ P+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q++ + +LR AV+ GGVDM Q
Sbjct: 72 RLLPQA-NTSASPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L NP IE A +T + Q + K +V
Sbjct: 190 PKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQIVYDIAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ + + +VF + LA +L G A I G SQ++R+ AL FK GE
Sbjct: 250 KLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQALEAFKRGEVE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P +++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKLPEFP 380
IEKLI + LP P
Sbjct: 370 ADIEKLIKRDLPLQP 384
>gi|108761880|ref|YP_632259.1| ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK 1622]
gi|108465760|gb|ABF90945.1| putative ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK
1622]
Length = 501
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/370 (41%), Positives = 222/370 (60%), Gaps = 4/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +L L D L+ A + G+ TP+ IQ +AIPHAL G+D++G+AQTG+GKT AFALPILQ
Sbjct: 2 TFDDLQLHDTLLRAVKAEGYTTPTPIQQKAIPHALAGRDVLGVAQTGTGKTAAFALPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L A P VL+PTRELA Q+ + F G G+ LR AV+ GGV Q
Sbjct: 62 RLSAKAPAGGARP-VRCLVLTPTRELAGQVGDSFGTYGKGLPLRHAVIFGGVGQNPQVQT 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L ++VATPGRL+D + +GF SL +L+ VLDEADR+L+ F + ++ +P
Sbjct: 121 LRNGVDVLVATPGRLLDLME--QGFVSLRSLEVFVLDEADRMLDMGFIHDVRRVIKALPP 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSAT+ + L R+ L +P+++E ST +T+ QQ FV + K L ++
Sbjct: 179 KRQTLFFSATLPPDIVDLARSILTDPIRVEVTPASSTAETVSQQVYFVEREQKRGLLTHL 238
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + +VFTRT +A L G + I G+ SQ+ R AL++F++G +L
Sbjct: 239 LKEGNIHRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVL 298
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RG+DI + V+NYD+P + Y+HR+GRT RAG +G A+S + E +
Sbjct: 299 VATDIAARGIDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRD 358
Query: 368 IEKLIGKKLP 377
IE+ I + +P
Sbjct: 359 IERTIRRNVP 368
>gi|119491751|ref|XP_001263370.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|134034081|sp|A1D6X9.1|DBP8_NEOFI RecName: Full=ATP-dependent RNA helicase dbp8
gi|119411530|gb|EAW21473.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 526
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/448 (39%), Positives = 265/448 (59%), Gaps = 33/448 (7%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
+E +F L + LV + + + P+ IQ IP L+G+D IG ++TGSGKT AF++
Sbjct: 93 EEASSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSV 152
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
P+LQ + AE+ + F VL+PTRELA+QI EQ +A+ + S++ ++ GG DM
Sbjct: 153 PMLQ---KWAEDPFGI---FGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRP 206
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEI 181
Q +AL RPH+V+ATPGRL DH+ ++ ++ LK +VLDEADRLL L ++
Sbjct: 207 QAIALAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRLLASGPGSMLPDV 266
Query: 182 ---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQ 230
L+ +P RQT LF+AT+T +V+ L+ R+ K PV +I ++ S TLKQ
Sbjct: 267 ETCLSALPPSSERQTLLFTATVTPEVRALKNMPRSANKPPVFVTEISTENQGSIPPTLKQ 326
Query: 231 QYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMS 288
Y VP +++ +L V + TE +AS ++F LL MLR L R + +
Sbjct: 327 TYLKVPLTHREAFLHVLLSTEDNASRPAIIFCNHTKTADLLERMLRRLTHRVTSLHSLLP 386
Query: 289 QSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAG 348
QS+R L +F+A IL+ TDVASRGLDIP+V +VINYD+P N DY+HRVGRTARAG
Sbjct: 387 QSERNANLARFRASAARILVATDVASRGLDIPTVSLVINYDVPRNPDDYVHRVGRTARAG 446
Query: 349 RTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG 408
R+G AI+LV Q +++ L IE+ +G+++ E+ EE V + E + + +K+ G
Sbjct: 447 RSGEAITLVGQRDVQLVLAIEERVGRQMEEW--SEEGVSI------EGRLVRTGVLKEVG 498
Query: 409 NKRRRKGGDEDDDIGRQ-FGINKKKLSK 435
+R G+ D+ GR G + KL K
Sbjct: 499 EAKREAMGEIDE--GRDVLGRKRNKLKK 524
>gi|85816749|gb|EAQ37935.1| DEAD/DEAH box helicase [Dokdonia donghaensis MED134]
Length = 425
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 223/368 (60%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK LGL D L++A G+ TPS IQ +AIP LEGKD++ AQTG+GKT F LP+L
Sbjct: 2 SFKSLGLSDALLKAVSEKGYTTPSPIQQKAIPKVLEGKDVLASAQTGTGKTAGFTLPMLH 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L IA ++ A VL+PTRELA QI + + ++ V+ GGV+ Q
Sbjct: 62 NL--IANPRQGRRKVRALVLTPTRELAAQIYDNVREYSKYVDIKSTVIFGGVNQNPQVRT 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
+ + I+VATPGRL+D L N SL +++LVLDEADR+L+ F + ++L ++P
Sbjct: 120 IRQGVDILVATPGRLLD-LENQGLLSLSDIEFLVLDEADRMLDMGFIHDIKKVLRLVPAK 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT K +KKL + L NPV +EA + +T + + Q+ V K L+ +
Sbjct: 179 RQNLLFSATFNKDIKKLASSILTNPVLVEATPENTTAEKVDQKTYRVDKSRKTEMLIKFI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E + +VFTRT L+ L G + I G+ +Q+ R+ AL FK+G+ +L+
Sbjct: 239 NEGNWDQVLVFTRTKHGANRLSQKLDKAGITSAAIHGNKTQNARVKALAGFKSGKIRVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDIP + VINY++P +DY+HR+GRT RAG +G AISLV E+ + I
Sbjct: 299 ATDIAARGLDIPLLPYVINYELPNVPEDYVHRIGRTGRAGASGQAISLVGVDEVAYVRGI 358
Query: 369 EKLIGKKL 376
EKL+G+KL
Sbjct: 359 EKLLGEKL 366
>gi|423216420|ref|ZP_17202944.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690791|gb|EIY84045.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
Length = 374
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 224/368 (60%), Gaps = 2/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL + + +++A G+ P+ IQ +AIP AL +D++G AQTG+GKT +FA+PI+Q
Sbjct: 2 TFKELNITEPILKAIGEKGYTVPTPIQEKAIPPALAKRDILGCAQTGTGKTASFAIPIIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E R A +L+PTRELA+QISE + +R V+ GGV+ Q
Sbjct: 62 HLQLDKEAARR-QGIKALILTPTRELALQISECIDDYSKHTRIRHGVIFGGVNQRPQVDL 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L + L T++Y VLDEADR+L+ F + IL +P+
Sbjct: 121 LRKGIDILVATPGRLLD-LMSQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKLPKE 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT FSATM + L ++ LKNPVKI K STVD++KQ FV K K L+ IL
Sbjct: 180 KQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSSTVDSIKQVVYFVEKKEKSQLLISIL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
++ S ++F+RT + +L G + I G+ SQ+ R AL FK+G+ +++
Sbjct: 240 SKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+ASRG+DI + +VINYD+P + Y+HR+GRT RAG TG A++ +Q E + I
Sbjct: 300 ATDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDI 359
Query: 369 EKLIGKKL 376
+KL GKKL
Sbjct: 360 QKLTGKKL 367
>gi|421158182|ref|ZP_15617475.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 25324]
gi|404549902|gb|EKA58715.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 25324]
Length = 449
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 224/380 (58%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLAPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|153939895|ref|YP_001390000.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
Langeland]
gi|384461069|ref|YP_005673664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
230613]
gi|152935791|gb|ABS41289.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
Langeland]
gi|295318086|gb|ADF98463.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
230613]
Length = 425
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 244/410 (59%), Gaps = 7/410 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ +IP+ L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQERSIPYILDGKDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + + A VL+PTRELAIQI+E FE G I+L+ AV+ GGV QT L
Sbjct: 63 LSKDKKANKNPRPIRALVLAPTRELAIQIAESFECYGKYINLKSAVIFGGVSQNPQTKVL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P++R
Sbjct: 123 REGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLPKVR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L ++L
Sbjct: 182 QNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRALLKHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +L+
Sbjct: 242 DKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E + IE
Sbjct: 302 TDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEETKSLKAIE 361
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK--RRRKGGD 417
KLI K++P EE + + E + + T +S K +R+GG+
Sbjct: 362 KLINKEIPVV----EEHPYKIRHINEDEVKKENTNNNSNKKPSSKRQGGN 407
>gi|168178014|ref|ZP_02612678.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum NCTC 2916]
gi|182671239|gb|EDT83213.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum NCTC 2916]
Length = 425
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 244/411 (59%), Gaps = 9/411 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + + A VL+PTRELAIQI E FE G I+L+ AV+ GGV QT L
Sbjct: 63 LSKDKKANKNPKPIRALVLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQTKVL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P++R
Sbjct: 123 REGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLPKIR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L ++L
Sbjct: 182 QNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSLLKHLLR 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +L+
Sbjct: 242 DKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E + IE
Sbjct: 302 TDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEETKSLKAIE 361
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
KLI K++P ++ R + + K++ NK+ +R+GG+
Sbjct: 362 KLINKEIPVVEDHPYKI-----RHINEDEVRKENTKNNSNKKPSSKRQGGN 407
>gi|142982611|sp|P0C2N8.1|DRS1_NEUCR RecName: Full=ATP-dependent RNA helicase drs-1
Length = 829
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 6/357 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E+ +F+E+ L ++ +VG+ P+ IQA+ IP +L GKD++G A TGSGKT AF +P
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 350
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
IL+ LL + VP +L+PTRELAIQ L S ++ + VGG+ + Q
Sbjct: 351 ILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQ 407
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L RP +V+ATPGR +DH+ N+ F++ T++ LVLDEADR+L D F L+EIL +
Sbjct: 408 EAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTL 467
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAK--YKDC 242
P+ RQT LFSATMT V +L RA L PV+I A S+ T TL Q++ R P + ++
Sbjct: 468 PKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPGRESKREG 527
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL++I + ++F R + ++ G + G M+Q++R+ ++ F+ G
Sbjct: 528 YLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVEDFRDG 587
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRVGRTARAGR+G AI+L +
Sbjct: 588 KVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLAAE 644
>gi|350290558|gb|EGZ71772.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 865
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 218/355 (61%), Gaps = 6/355 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E+ +F+E+ L ++ +VG+ P+ IQA+ IP +L GKD++G A TGSGKT AF +P
Sbjct: 292 EMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 351
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
IL+ LL + VP +L+PTRELAIQ L S ++ + VGG+ + Q
Sbjct: 352 ILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQ 408
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L RP +V+ATPGR +DH+ N+ F++ T++ LVLDEADR+L D F L+EIL +
Sbjct: 409 EAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTL 468
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAK--YKDC 242
P+ RQT LFSATMT V +L RA L PV+I A S+ T TL Q++ R P + ++
Sbjct: 469 PKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPGRESKREG 528
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL++I + ++F R + ++ G + G M+Q++R+ ++ F+ G
Sbjct: 529 YLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVEDFRDG 588
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRVGRTARAGR+G AI+L
Sbjct: 589 KVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLA 643
>gi|288554498|ref|YP_003426433.1| ATP-dependent RNA helicase [Bacillus pseudofirmus OF4]
gi|288545658|gb|ADC49541.1| ATP-dependent RNA helicase [Bacillus pseudofirmus OF4]
Length = 502
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/380 (42%), Positives = 226/380 (59%), Gaps = 9/380 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF E GL E+V A +G++ + IQA IP ALEGKD+IG AQTG+GKTGAF +P++
Sbjct: 3 TFYEFGLNSEVVRAVTQMGFEEATPIQAATIPTALEGKDIIGQAQTGTGKTGAFGVPLID 62
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ EN A +L+PTRELA Q++E G +R V+ GG DM +Q
Sbjct: 63 RI--NIENDHVQ----ALILAPTRELANQVAESLFKFGKYKGVRTVVVYGGQDMRKQIRD 116
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L +PH+VVATPGRLMDH+ K LG ++ +VLDEAD +LN F + ++ IL+ +P
Sbjct: 117 LKNKPHVVVATPGRLMDHMRR-KTIRLGQVETVVLDEADEMLNMGFIEDIETILSEVPNE 175
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSATM K+++KL + + P I SK T++ ++QQY V + K L +
Sbjct: 176 RQTLLFSATMPKRIEKLAQTFMSEPKLIAVKSKEVTMENIEQQYVEVHERQKFDTLCRFI 235
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF RT L+ L G RA I G ++Q+KR L KFK G ++L+
Sbjct: 236 DIHTPELAIVFGRTKRRVDELSEALTKRGYRAEGIHGDLNQAKRDSVLRKFKNGLVDVLV 295
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI V V N+D+P + + Y+HR+GRT RAG++G+A++ E E I
Sbjct: 296 ATDVAARGLDITGVTHVYNFDLPQDPESYVHRIGRTGRAGKSGLALTFATPREREHVKTI 355
Query: 369 EKLIGKKLP--EFPAEEEEV 386
E++ KK+ E P EE +
Sbjct: 356 EQVSKKKMTRREVPTYEEAI 375
>gi|326470936|gb|EGD94945.1| ATP-dependent RNA helicase DBP8 [Trichophyton tonsurans CBS 112818]
gi|326478499|gb|EGE02509.1| ATP-dependent RNA helicase DBP8 [Trichophyton equinum CBS 127.97]
Length = 528
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 263/443 (59%), Gaps = 32/443 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + + K P+ IQ IP ++G+D IG ++TGSGKT AFA PIL
Sbjct: 100 SFSSLGLAPWLVSSLKAMEIKRPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAAPILH 159
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E +A +L+PTRELA+QI EQ +A+ + SL+ ++ GG DM Q +
Sbjct: 160 KWSEDPF------GIYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIG 213
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYLVLDEADRLLNDDFEKSLDEI---L 182
L +RPHIV+ATPGRL DH+ ++ L ++ +VLDEADRLL L ++ L
Sbjct: 214 LSQRPHIVIATPGRLADHIKSSGEDTIIGLRRVRMVVLDEADRLLTSGPGSMLPDVETCL 273
Query: 183 NVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPVKI-EAASKYSTVD-TLKQQYRFV 235
+ +P RQT LF+AT+T +V+ L+ RA K P+ + E +++ +T+ TLKQ Y V
Sbjct: 274 SALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKPPIFVTEISTENTTIPPTLKQTYLQV 333
Query: 236 PAKYKDCYLVYILTEV--SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P +++ +L +L+ S+ ST++F LL +LR L R + + QS+R+
Sbjct: 334 PLNHREAFLHVLLSTEGNSSKSTIIFCNRTKTADLLERILRRLSHRVTSLHSLLPQSERI 393
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
L++F+A +L+ TDVA+RGLDIPSV +VINYD+P N DYIHRVGRTARAGR G A
Sbjct: 394 ANLSRFRASAARLLVATDVAARGLDIPSVGLVINYDVPRNPDDYIHRVGRTARAGREGEA 453
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
I+LV Q +++ L IE +GK++ + EE V + E++ + +K+ G+ +R
Sbjct: 454 ITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI------ESRIVKGTVLKEVGSTKRE 505
Query: 414 KGGDEDDDIGRQ-FGINKKKLSK 435
G+ D+ GR G +KL K
Sbjct: 506 AMGEIDE--GRDVLGRRVRKLKK 526
>gi|27366679|ref|NP_762206.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|37676391|ref|NP_936787.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
gi|320158571|ref|YP_004190949.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
gi|27358245|gb|AAO07196.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|37200933|dbj|BAC96757.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
gi|319933883|gb|ADV88746.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
Length = 418
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 227/372 (61%), Gaps = 5/372 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL L + +G+ TP+ IQ +AIPH L+G+D++ AQTG+GKT A+ LP++Q
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 69 ALLEIAENQRTVPAF-FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
+L + T P A +L+PTRELA Q+ + + L + GG + Q
Sbjct: 64 -MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQE 122
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L K I++ATPGRL+DHL TK SL L+ LVLDEADR+L+ F + I+ +P
Sbjct: 123 QLAKGVDILIATPGRLLDHLF-TKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPE 181
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT LFSAT +VK L +K PV+++ A+ ST DT+KQ V K K L Y+
Sbjct: 182 ERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTADTVKQMVYPVDKKRKSELLAYL 241
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ + +VFT+T + L L+ G +A I+G SQ R AL+ FK+G+ L
Sbjct: 242 IGSRNWQQVLVFTKTKQGSDALVSELKLDGIKAASINGDKSQGARQKALDDFKSGKVRAL 301
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TDVA+RGLDI ++ V+N+D+P ++DY+HR+GRT RAG+TG+A+S +++ E E+ LQ
Sbjct: 302 IATDVAARGLDIAQLEQVVNFDMPYKAEDYVHRIGRTGRAGQTGLAVSFMSRDE-EYLLQ 360
Query: 368 -IEKLIGKKLPE 378
IE L+ +LP+
Sbjct: 361 AIENLLDTRLPQ 372
>gi|332525460|ref|ZP_08401618.1| putative ATP-dependent RNA helicase 2 [Rubrivivax benzoatilyticus
JA2]
gi|332108727|gb|EGJ09951.1| putative ATP-dependent RNA helicase 2 [Rubrivivax benzoatilyticus
JA2]
Length = 483
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 230/379 (60%), Gaps = 5/379 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F L L +L+ A + G++ + IQA+AIP L+G+D++G AQTG+GKT AF +P+LQ
Sbjct: 19 FDTLALDPKLLRAVADAGYRAMTPIQAKAIPIVLDGRDVMGAAQTGTGKTAAFTIPLLQK 78
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+L EN PA A VL+PTRELA Q++ + LR AV+ GGVDM QT
Sbjct: 79 MLR-HENTSMSPARHPVRALVLAPTRELADQVAANVKTYAKHTRLRSAVVFGGVDMKPQT 137
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +++ATPGRL+DH+ + L ++Y+VLDEADR+L+ F L IL+ +P
Sbjct: 138 AELKAGVEVLIATPGRLLDHI-EARNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSFLP 196
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT LFSAT + ++K+L + L++PV +E A +T T++Q++ V K +
Sbjct: 197 KTRQTLLFSATFSPEIKRLAGSYLQDPVTVEVARPNATASTVEQRFYGVGDDDKRATVRQ 256
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
IL + S +VF + LA G + + G SQ +RL AL FKAGE ++
Sbjct: 257 ILRQRELSQAIVFVNSKLGAARLARSFERDGLKTQALHGDKSQDERLKALAAFKAGEVDL 316
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + V N+D+P N++DY+HR+GRT RAG +G+A++LV + +
Sbjct: 317 LVATDVAARGLDIADLPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVTRDDTRLIG 376
Query: 367 QIEKLIGKKLPEFPAEEEE 385
IEKLI KK+ P E E+
Sbjct: 377 DIEKLIKKKIEIEPFEIED 395
>gi|257870943|ref|ZP_05650596.1| helicase [Enterococcus gallinarum EG2]
gi|357051322|ref|ZP_09112516.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
gi|257805107|gb|EEV33929.1| helicase [Enterococcus gallinarum EG2]
gi|355380144|gb|EHG27289.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
Length = 502
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 227/383 (59%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L L +EL+ + E G++ + IQ IP AL+G+D+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLALQGRDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+ + A +Q V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 63 I-DPANHQ-----LQGLVIAPTRELAIQTQEELYRLGKDKKIRVQAVYGGADIGRQIRQL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVETLVLDEADEMLNMGFLEDIEKIISQVPEER 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K + +KNP ++ +K T D + Q Y + KD I+T
Sbjct: 176 QTLLFSATMPPAIKSIGVKFMKNPEHVQIKAKEMTADLIDQYY----VRSKDYEKFDIMT 231
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ + T+VF RT LA L G +A I G +SQ KR+ L FK+G +
Sbjct: 232 RLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKSGHLD 291
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 292 ILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGISVTFVTPNEMSYL 351
Query: 366 LQIEKLIGKKL-PEFPAEEEEVL 387
IE L K++ P P E+E
Sbjct: 352 HVIENLTKKRMSPMRPPTEKEAF 374
>gi|443468655|ref|ZP_21058862.1| ATP-dependent RNA helicase [Pseudomonas pseudoalcaligenes KF707]
gi|442897874|gb|ELS24691.1| ATP-dependent RNA helicase [Pseudomonas pseudoalcaligenes KF707]
Length = 439
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 221/368 (60%), Gaps = 2/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL + L+ A E +G++TPS +QAEAIP L+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLIEPLLRATEALGYQTPSPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q++E F G + LR + GGV + Q +
Sbjct: 62 KLTQEGP-QVAANSIRALVLVPTRELAEQVNESFRVYGQHLPLRHYAVYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L G L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGIDILVATPGRLLD-LYRQNAVKFGQLQALVLDEADRMLDLGFSRELDELFVALPRR 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++++ R L++P+ IE + + + ++ Q V K K +++L
Sbjct: 180 RQTLLFSATFSDAIRQMARELLRDPLSIEVSPRNAAARSVSQWLIPVDKKRKSELFLHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF +T L L+ G A I G Q RL AL +FKAGE +L+
Sbjct: 240 EDRGWGQVLVFAKTRKGVDQLVDELQARGLAADSIHGDKPQPSRLRALQRFKAGEVQVLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG TG A+SLV E++ I
Sbjct: 300 ATDVAARGLDIDDLPLVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVCADEVQLLSAI 359
Query: 369 EKLIGKKL 376
E L + L
Sbjct: 360 EVLTRQTL 367
>gi|424762589|ref|ZP_18190093.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TX1337RF]
gi|431757804|ref|ZP_19546433.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
gi|402424479|gb|EJV56656.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
TX1337RF]
gi|430618309|gb|ELB55156.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
Length = 503
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 230/379 (60%), Gaps = 13/379 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQAE IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALVGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPEQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +K+P ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKSPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF--PAEEE 384
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKE 372
>gi|164428960|ref|XP_001728501.1| hypothetical protein NCU11175 [Neurospora crassa OR74A]
gi|157072353|gb|EDO65410.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 857
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 6/357 (1%)
Query: 6 EVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 65
E+ +F+E+ L ++ +VG+ P+ IQA+ IP +L GKD++G A TGSGKT AF +P
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 350
Query: 66 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
IL+ LL + VP +L+PTRELAIQ L S ++ + VGG+ + Q
Sbjct: 351 ILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQ 407
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L RP +V+ATPGR +DH+ N+ F++ T++ LVLDEADR+L D F L+EIL +
Sbjct: 408 EAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTL 467
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAK--YKDC 242
P+ RQT LFSATMT V +L RA L PV+I A S+ T TL Q++ R P + ++
Sbjct: 468 PKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPGRESKREG 527
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL++I + ++F R + ++ G + G M+Q++R+ ++ F+ G
Sbjct: 528 YLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVEDFRDG 587
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRVGRTARAGR+G AI+L +
Sbjct: 588 KVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLAAE 644
>gi|398835789|ref|ZP_10593146.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
gi|398215227|gb|EJN01792.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
Length = 487
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 223/370 (60%), Gaps = 5/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F++ GL +++ A G+ P+ IQA+AIP L+G+D++G AQTG+GKT F+LPI+Q
Sbjct: 18 FEDFGLSPDILRALTEQGYVHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQL 77
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LL A + PA A +L+PTRELA Q+++ +A LR V+ GGVDM QT
Sbjct: 78 LLAHASTSAS-PARHPVRALILTPTRELADQVADNVKAYSRFTPLRSTVVFGGVDMAPQT 136
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L IV+ATPGRL+DH+ K +L + LV+DEADR+L+ F L I+N++P
Sbjct: 137 ATLRAGVEIVIATPGRLLDHVQQ-KTVNLSQTQILVMDEADRMLDMGFLPDLQRIINLLP 195
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ +FSAT + ++KKL + NPV IE A +T + + Q V K + +
Sbjct: 196 KKRQNLMFSATFSPEIKKLAGSFQNNPVTIEVARSNATAERVTQTIYRVDESAKADAVSF 255
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
I+ E + +VF+ T L+ L N G +A I G +Q++R+ AL FK G+ +
Sbjct: 256 IIRERNLKQVIVFSNTKIGASRLSRQLENEGVKASAIHGDKTQNERMAALEAFKQGQIEV 315
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VINYD+P N++DY+HR+GRT RAG +G AISL +
Sbjct: 316 LVATDVAARGLDITDLPCVINYDMPYNAEDYVHRIGRTGRAGASGDAISLFCDKDERLLT 375
Query: 367 QIEKLIGKKL 376
IEKLI KK
Sbjct: 376 DIEKLIKKKF 385
>gi|253575100|ref|ZP_04852439.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845556|gb|EES73565.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
Length = 410
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/406 (41%), Positives = 233/406 (57%), Gaps = 6/406 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L +++A E + P+ IQ +AIP L G+DL+G AQTG+GKT AFA+P LQ
Sbjct: 3 FKELNLIPSILKALEQENYTAPTPIQQQAIPPILSGQDLLGCAQTGTGKTAAFAIPTLQL 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + A V++PTRELA+QI E F A G + L+CAV+ GGV Q AL
Sbjct: 63 LHKDGAPRAGRRNIRALVITPTRELALQIYENFCAYGKYLPLKCAVIFGGVSQKPQEAAL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
K I+VATPGRL D L K L ++ L+LDEADR+L+ F + +I+ P R
Sbjct: 123 QKGVDILVATPGRLND-LMQQKLIDLKNVELLILDEADRMLDMGFIHDVKKIIAKTPSQR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM + ++ + L+NPVK+E STVDT+ Q +V K L+++L
Sbjct: 182 QTLLFSATMPDAIAQMADSILRNPVKVEITPVSSTVDTIGQYLYYVDKGNKRDLLIHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VFTRT L L A I G SQ R AL FK +L+
Sbjct: 242 DPSIESAIVFTRTKHGADRLVRHLTKAQVSAKAIHGDKSQGARQTALQDFKNRTLRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + VINY++P + Y+HR+GRT RAG++GVAIS + E + IE
Sbjct: 302 TDIAARGIDIDELSHVINYELPNIPETYVHRIGRTGRAGQSGVAISFCDFDEKPYLADIE 361
Query: 370 KLIGKKLP---EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
KLIGK++P E P ++ L + V A+ + T +S N +R
Sbjct: 362 KLIGKRIPVIKEHPYPMQQTALAPKPVQPARESKKRT--ESLNTKR 405
>gi|351730076|ref|ZP_08947767.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax
radicis N35]
Length = 498
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G+++ + IQ +AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQEQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL+ E+ T PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLLK-HESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NP+ IE A T T++Q++ K +
Sbjct: 182 PKQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQRFYSANDDDKRRAIH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L +F + LA L G + + G SQ +RL AL FK+GE +
Sbjct: 242 QVLKTRGLKQAFIFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALEAFKSGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++LV+ +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDARLV 361
Query: 366 LQIEKLIGKKL 376
IEKLI KK+
Sbjct: 362 ADIEKLIKKKI 372
>gi|344171941|emb|CCA84567.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia syzygii R24]
Length = 481
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 226/376 (60%), Gaps = 9/376 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF GL +++ A G+ P+ IQA AIP + G+D++G AQTG+GKT F+LPI+Q
Sbjct: 2 TFDTFGLHPDILRALAESGYTRPTPIQAAAIPVVVAGRDVMGAAQTGTGKTAGFSLPIIQ 61
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A N PA A +L+PTRELA Q+ + G +LR AV+ GGVDM Q
Sbjct: 62 NLLPEA-NTSASPARHPVRALILTPTRELADQVYDNVAKYGKYTALRSAVVFGGVDMNPQ 120
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T L + I+VATPGRL+DH+ + +L ++ LVLDEADR+L+ F L I+N++
Sbjct: 121 TEQLRRGVEILVATPGRLLDHVQQ-RSVNLSQVRMLVLDEADRMLDMGFLPDLQRIINLL 179
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQT LFSAT + ++KKL + L++P IE A +T D ++Q VP +K LV
Sbjct: 180 PAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQAALV 239
Query: 246 YILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
++L + + S +VF+ + LA L G A I G +Q++R+ L FK
Sbjct: 240 HLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQTERMQTLEAFKQ 299
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G ++L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL +
Sbjct: 300 GTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFAPGD 359
Query: 362 LEWYLQIEKLIGKKLP 377
IEKLI + LP
Sbjct: 360 ERLLADIEKLIKRNLP 375
>gi|212555159|gb|ACJ27613.1| Helicase, DEAD box [Shewanella piezotolerans WP3]
Length = 482
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 222/368 (60%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL ++++A N G+ TPS IQA+AIP LEGKD++ AQTG+GKT F LP+L+
Sbjct: 2 SFASLGLSAQILKAVANKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + N+ A VL+PTRELA Q+ E E G + L+ AV+ GGV + Q
Sbjct: 62 LLSK--GNKAPAKQVRALVLTPTRELAAQVGESVEIYGKNLPLKSAVIFGGVGIGPQISK 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + I+VATPGRL+D L N + + L+ LVLDEADR+L+ F + +IL ++P
Sbjct: 120 LSRGVDILVATPGRLLD-LYNQRAVNFSQLEVLVLDEADRMLDMGFIHDIKKILAILPAK 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ +FSAT + ++KL + + NPV+I + +T +T+KQ V K LV ++
Sbjct: 179 RQNLMFSATFSDDIRKLAKGLVNNPVEISVTPRNATANTVKQWICPVDKGQKASVLVKLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF+RT LA L G A I G+ SQ R AL +FK+G+ +L+
Sbjct: 239 KQHDWQQVLVFSRTKHGANRLAKNLDAKGITAAAIHGNKSQGARTKALAEFKSGDVRVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG TG A+SLV+ E++ I
Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSDEEIKLLRDI 358
Query: 369 EKLIGKKL 376
E LI + L
Sbjct: 359 ELLIKQNL 366
>gi|387816925|ref|YP_005677269.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum H04402 065]
gi|322804966|emb|CBZ02525.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum H04402 065]
Length = 425
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 245/411 (59%), Gaps = 9/411 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+K + IQ ++IP+ L+GKDL+G AQTG+GKT AFA+P+LQ
Sbjct: 3 FENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPVLQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + + + + A VL+PTRELAIQI E FE G I+L+ AV+ GGV QT L
Sbjct: 63 LSKDKKANKNPRSIRALVLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQTKVL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I++ATPGR++D L N K L ++ VLDEADR+L+ + +I++ +P++R
Sbjct: 123 REGVDILIATPGRMLD-LFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLPKIR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM ++ KL + +K+P+++E STVDT+ Q+ V K K L ++L
Sbjct: 182 QNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRALLKHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
+ S S +VF+ T ++A L G A I G+ SQ+ R ALN FK G+ +L+
Sbjct: 242 DKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + V NY++P + Y+HR+GRT RAG GVAIS + E + IE
Sbjct: 302 TDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDIEETKSLKAIE 361
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGD 417
KLI K++P ++ R + + K++ NK+ +R+GG+
Sbjct: 362 KLIHKEIPVVEDHPYKI-----RHINEDEVKKENTKNNYNKKPSSKRQGGN 407
>gi|407924387|gb|EKG17439.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 412
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/375 (45%), Positives = 234/375 (62%), Gaps = 27/375 (7%)
Query: 29 KTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVL 88
K P+ IQ IP ++G+D IG ++TGSGKT AFA+PILQ E A FA +L
Sbjct: 4 KKPTGIQKGCIPEIIKGRDCIGGSRTGSGKTVAFAVPILQKWSEDPV------AIFAVIL 57
Query: 89 SPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLT 148
+PTRELA+QI EQF A+G +L+ ++ GG DM Q +AL RPH+V+ATPGRL DH+
Sbjct: 58 TPTRELALQIYEQFNAIGGPQNLKTILVTGGTDMRSQAIALASRPHVVIATPGRLADHI- 116
Query: 149 NTKG----FSLGTLKYLVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMT 199
N+ G L ++++VLDEADRLL L ++ L+V+P RQT LF+AT+T
Sbjct: 117 NSSGEDTICGLRRVRFVVLDEADRLLASGRGSMLPDVETCLSVLPPSSRRQTCLFTATVT 176
Query: 200 KKVKKLQRACLKNPVKIEA-ASKYSTVD-----TLKQQYRFVPAKYKDCYL-VYILTEVS 252
+V+ L + + P K E + T D TL+Q+Y VP +++ +L +LT +
Sbjct: 177 PEVRAL-KDMPRTPGKPEVFVCEVDTEDLAVPTTLQQKYLQVPVTHREAFLHTLLLTPAN 235
Query: 253 AS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTD 311
AS ST++F +LL MLR L R + + QS+R+ L +F+A IL+ TD
Sbjct: 236 ASKSTIIFVNRTSTAQLLEQMLRLLDHRVSSLHSGLPQSQRISNLARFRAKAARILVATD 295
Query: 312 VASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKL 371
VA+RGLDIP+V+MVINYD+P + DYIHRVGRTARAGR G +I++V Q ++E L IE
Sbjct: 296 VAARGLDIPAVEMVINYDVPRDPDDYIHRVGRTARAGRAGESITMVGQRDVELVLAIENR 355
Query: 372 IGKKLPEFPAEEEEV 386
+G K+ EF EEE V
Sbjct: 356 VGTKMIEF--EEEGV 368
>gi|425055862|ref|ZP_18459326.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
gi|403033019|gb|EJY44552.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
Length = 503
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 230/379 (60%), Gaps = 13/379 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQAE IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +K+P ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKSPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF--PAEEE 384
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKE 372
>gi|126175663|ref|YP_001051812.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
gi|125998868|gb|ABN62943.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
Length = 526
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 225/376 (59%), Gaps = 3/376 (0%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+A + +F LGL +++A G+ TPS IQA+AIP L+GKD++ AQTG+GKT
Sbjct: 5 VATRDQSMSFTSLGLSAPILKAVAEQGYDTPSPIQAQAIPAVLQGKDVMAAAQTGTGKTA 64
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
F LP+L+ L + N+ A VL+PTRELA Q++E E G + LR AV+ GGV
Sbjct: 65 GFTLPMLELLSK--GNRAQAGQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGV 122
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
+ Q L ++VATPGRLMD L N K L+ LVLDEADR+L+ F + + +
Sbjct: 123 PINPQIAKLRHGVDVLVATPGRLMD-LYNQKAVKFSQLEILVLDEADRMLDMGFIRDIRK 181
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL ++P+ RQ +FSAT + ++++L + + NPV+I + + T+KQ V K
Sbjct: 182 ILAILPKQRQNLMFSATFSDEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKSQK 241
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
L+ ++ + +VF+RT LA L + G +A I G+ SQ+ R AL FK
Sbjct: 242 SALLIQLIKQNDWQQVLVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFK 301
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G+ +L+ TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+
Sbjct: 302 NGQARVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNE 361
Query: 361 ELEWYLQIEKLIGKKL 376
E++ IE+LI + L
Sbjct: 362 EIKLLNDIERLINRVL 377
>gi|152999406|ref|YP_001365087.1| DEAD/DEAH box helicase [Shewanella baltica OS185]
gi|151364024|gb|ABS07024.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
Length = 525
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 225/376 (59%), Gaps = 3/376 (0%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+A + +F LGL +++A G+ TPS IQA+AIP L+GKD++ AQTG+GKT
Sbjct: 5 VATRDQSMSFTSLGLSAPILKAVAEQGYDTPSPIQAQAIPAVLQGKDVMAAAQTGTGKTA 64
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
F LP+L+ L + N+ A VL+PTRELA Q++E E G + LR AV+ GGV
Sbjct: 65 GFTLPMLELLSK--GNRAQAGQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGV 122
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
+ Q L ++VATPGRLMD L N K L+ LVLDEADR+L+ F + + +
Sbjct: 123 PINPQIAKLRHGVDVLVATPGRLMD-LYNQKAVKFSQLEILVLDEADRMLDMGFIRDIRK 181
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL ++P+ RQ +FSAT + ++++L + + NPV+I + + T+KQ V K
Sbjct: 182 ILAILPKQRQNLMFSATFSDEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKSQK 241
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
L+ ++ + +VF+RT LA L + G +A I G+ SQ+ R AL FK
Sbjct: 242 SALLIQLIKQNDWQQVLVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFK 301
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G+ +L+ TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+
Sbjct: 302 NGQARVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNE 361
Query: 361 ELEWYLQIEKLIGKKL 376
E++ IE+LI + L
Sbjct: 362 EIKLLNDIERLINRVL 377
>gi|417948797|ref|ZP_12591939.1| ATP-dependent RNA helicase [Vibrio splendidus ATCC 33789]
gi|342809160|gb|EGU44284.1| ATP-dependent RNA helicase [Vibrio splendidus ATCC 33789]
Length = 423
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 222/372 (59%), Gaps = 2/372 (0%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +LGL D L+ E + + P+ +Q +AIP LEGKD++ AQTG+GKT AF LPI+
Sbjct: 6 KSFNQLGLSDHLLATLEELNFTAPTSVQEQAIPLVLEGKDVLAGAQTGTGKTAAFGLPII 65
Query: 68 QALLEIAENQRTVPAFF-ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
Q LL +N P A VL PTRELA Q+ + + G L+ V GGV M QT
Sbjct: 66 QRLLATKDNVIPNPKLVRALVLVPTRELAQQVFDNVSSYAKGTDLKVVVAYGGVSMKVQT 125
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L + I+VATPGRL+DH+ TK L + LVLDEADR+L+ F + IL+ +
Sbjct: 126 DNLRQGADILVATPGRLIDHMF-TKNIMLSQTEVLVLDEADRMLDMGFMPDIKRILSRMN 184
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+RQT FSAT K+K + +++P +I+ ST +T+KQ V K K L Y
Sbjct: 185 DVRQTLFFSATFDNKIKAIAHRMMQSPSEIQVTPTNSTAETVKQMVYPVDKKRKSELLAY 244
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ + +VFT+T T L L+ G +A I+G SQ R AL+ FK+G+
Sbjct: 245 LIGSNNWQQVLVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRA 304
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVA+RG+DI ++ V+NYD+P ++DY+HR+GRT RAG +G+AISL++ E
Sbjct: 305 LIATDVAARGIDIQQLEQVVNYDMPYKAEDYVHRIGRTGRAGNSGLAISLMSHDEEYLLG 364
Query: 367 QIEKLIGKKLPE 378
IE+L+ +LP+
Sbjct: 365 AIERLLDTRLPQ 376
>gi|343507476|ref|ZP_08744881.1| ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC 700023]
gi|342798268|gb|EGU33892.1| ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC 700023]
Length = 419
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 244/419 (58%), Gaps = 20/419 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL LV+ +G+ TP+++Q AIP LEG D++ AQTG+GKT AF LPI+Q
Sbjct: 5 FANLGLEPTLVDTVNQLGFNTPTEVQLHAIPPVLEGHDVLAGAQTGTGKTAAFGLPIIQR 64
Query: 70 LLEIA---ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L + QR A VL PTRELA Q+ + A SL+ GG M QT
Sbjct: 65 LSNQTYSRDPQRN--DVSALVLVPTRELAQQVFDNLTAYAVNTSLKIVTAYGGTSMNVQT 122
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L + I++ATPGRL+DH+ + K SL + LVLDEADR+L+ F L IL +
Sbjct: 123 KNLYQGCDILIATPGRLLDHM-HCKNISLQRTQTLVLDEADRMLDMGFWPDLKRILGKMN 181
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT FSAT KK+K L L NP++++ AS+ ST DT++Q V K K L Y
Sbjct: 182 SDRQTLFFSATFDKKIKDLAYKMLNNPIEVQVASQNSTADTVEQMVHPVDKKRKSELLAY 241
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ + +VFT+T + LA L+ G +A I+G SQ R AL+ FKAG+
Sbjct: 242 LIGSRNWQQVLVFTKTKQGSDSLAKELKLDGIKAASINGDKSQGARQKALDDFKAGKVRA 301
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVA+RGLDI ++ VIN+D+P ++DYIHR+GRT RAG+ G+A+SL+++ E E+ L
Sbjct: 302 LIATDVAARGLDINQLEQVINFDMPFKAEDYIHRIGRTGRAGKKGLAVSLMSRDE-EYLL 360
Query: 367 Q-IEKLIGKKLPEFPAEEEEVLLLLE-----------RVTEAKRI-SQMTIKDSGNKRR 412
+ IE+L+ KKLP+ E E L+ + R +E +R+ ++M I KRR
Sbjct: 361 EAIERLLDKKLPQEWLEGYEPSLIEDLEPEHPSRRNSRSSEKRRMKAKMNIHSGRGKRR 419
>gi|187923247|ref|YP_001894889.1| DEAD/DEAH box helicase [Burkholderia phytofirmans PsJN]
gi|187714441|gb|ACD15665.1| DEAD/DEAH box helicase domain protein [Burkholderia phytofirmans
PsJN]
Length = 489
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/415 (40%), Positives = 242/415 (58%), Gaps = 20/415 (4%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A + G+ P+ IQ +AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ +A +LR AV+ GGVDM Q
Sbjct: 72 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E +VF + LA L G A I G +Q++R+ AL+ FK GE
Sbjct: 250 QLIRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQNERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKLP------EFPA--EEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
IEKLI + L E P EE ER +E + +D G++RR
Sbjct: 370 ADIEKLIKRPLDVQRLTVEAPVRHHHEERAPRRERSSEGR-------EDRGSRRR 417
>gi|395003518|ref|ZP_10387653.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
gi|394318531|gb|EJE54950.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
Length = 499
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/371 (42%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L L + L A +G+++ + IQA+AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL+ E+ T PA A VL PTRELA Q+++Q LR V+ GG+DM Q
Sbjct: 64 RLLK-HESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQ 122
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
T+ L K ++VATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +
Sbjct: 123 TIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ R T LFSAT + ++K+L + L+NP+ IE A T T++Q++ K +
Sbjct: 182 PKQRTTLLFSATFSPEIKRLAGSYLQNPITIEVARPNETASTVEQRFYSANDDDKRRAIH 241
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L +F + LA L G + + G SQ +RL AL FK GE +
Sbjct: 242 QVLKTRGLKQAFIFVNSKLGCARLARSLEREGLKTAALHGDKSQDERLKALEAFKKGEVD 301
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+CTDVA+RGLDI V V N+D+P N++DY+HR+GRT RAG +G+A++LV+ +
Sbjct: 302 LLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDARLV 361
Query: 366 LQIEKLIGKKL 376
IEKLI KK+
Sbjct: 362 ADIEKLIKKKI 372
>gi|171057308|ref|YP_001789657.1| DEAD/DEAH box helicase [Leptothrix cholodnii SP-6]
gi|170774753|gb|ACB32892.1| DEAD/DEAH box helicase domain protein [Leptothrix cholodnii SP-6]
Length = 479
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 229/370 (61%), Gaps = 5/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F L L +L+ A + G+ T + IQA+AIP L+G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 17 FDSLPLDPKLLRAIVDAGYLTMTPIQAKAIPIVLDGRDVMGAAQTGTGKTAAFSLPLLQK 76
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+L EN PA A VL+PTRELA Q++ + LR + GG+DM QT
Sbjct: 77 MLR-HENASASPARHPVRALVLAPTRELADQVANNVKTYARHSQLRVTCVFGGIDMAPQT 135
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L + +++ATPGRL+DH+ K L ++Y+VLDEADR+L+ F L IL+ +P
Sbjct: 136 AELKRGVEVLIATPGRLLDHI-QAKNCQLNQVEYVVLDEADRMLDIGFLPDLQRILSYLP 194
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT LFSAT + ++KKL ++ L++P+ +E A +T ++Q++ V K +++
Sbjct: 195 KTRQTLLFSATFSPEIKKLAQSYLQDPLLVEVARPNATATNVEQRFYSVTDDDKRRTVLH 254
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
IL E S + +VF + LA G R + G SQ +RL AL+ FK GE ++
Sbjct: 255 ILRERSITQAIVFVNSKLGAARLARSFERDGLRTSALHGDKSQDERLKALDAFKRGEVDV 314
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + V N+DIP N++DY+HR+GRT RAG +G+A+SLV+ +
Sbjct: 315 LVATDVAARGLDIADLPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSLVSHDDNRLVS 374
Query: 367 QIEKLIGKKL 376
IE+LI KK+
Sbjct: 375 DIEQLIKKKI 384
>gi|167625497|ref|YP_001675791.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167355519|gb|ABZ78132.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 492
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 237/424 (55%), Gaps = 15/424 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL ++++A N G+ TPS IQA+AIP LEGKD++ AQTG+GKT F LP
Sbjct: 2 SFASLGLSAQILKAVANKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLP--- 58
Query: 69 ALLEIAENQRTVPA--FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LLE+ PA A VL+PTRELA QI E E G + L+ AV+ GGV + Q
Sbjct: 59 -LLELLSKGTKAPAKQVRALVLTPTRELAAQIGESVEVYGQFLPLKSAVIFGGVGIGPQI 117
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L + I+VATPGRL+D L N + S L+ LVLDEADR+L+ F + +IL ++P
Sbjct: 118 TKLNRGVDILVATPGRLLD-LYNQRAVSFSQLEVLVLDEADRMLDMGFIHDIKKILAILP 176
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQ +FSAT + +++L + + NPV+I + +T +T+KQ V K L+
Sbjct: 177 AKRQNLMFSATFSDDIRQLAKGLVNNPVEISVTPRNATANTVKQWICPVDHGQKVAVLIE 236
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ + +VF+RT LA L G A I G+ SQ R AL FK+G +
Sbjct: 237 LIKQNDWQQVLVFSRTKHGANRLAKNLEAKGITAAAIHGNKSQGARTKALADFKSGAVRV 296
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+ E++
Sbjct: 297 LVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGHAVSLVSSEEIKLLR 356
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-NKRRRKGGDEDDDIGRQ 425
IE LI + L P E E L + +T K G NK R G++ GR
Sbjct: 357 DIELLIKQNLERRPVEGFEPTHSLPE-------TDLTGKSHGQNKGPRNSGNQSRGNGRS 409
Query: 426 FGIN 429
N
Sbjct: 410 RSPN 413
>gi|160874026|ref|YP_001553342.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|160859548|gb|ABX48082.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
Length = 525
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 225/376 (59%), Gaps = 3/376 (0%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+A + +F LGL +++A G+ TPS IQA+AIP L+GKD++ AQTG+GKT
Sbjct: 5 VATRDQSMSFTSLGLSAPILKAVAEQGYDTPSPIQAQAIPAVLQGKDVMAAAQTGTGKTA 64
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
F LP+L+ L + N+ A VL+PTRELA Q++E E G + LR AV+ GGV
Sbjct: 65 GFTLPMLELLSK--GNRAQAGQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGV 122
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
+ Q L ++VATPGRLMD L N K L+ LVLDEADR+L+ F + + +
Sbjct: 123 PINPQIAKLRHGVDVLVATPGRLMD-LYNQKAVKFSQLEILVLDEADRMLDMGFIRDIRK 181
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL ++P+ RQ +FSAT + ++++L + + NPV+I + + T+KQ V K
Sbjct: 182 ILAILPKQRQNLMFSATFSDEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKSQK 241
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
L+ ++ + +VF+RT LA L + G +A I G+ SQ+ R AL FK
Sbjct: 242 SALLIQLIKQNDWQQVLVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFK 301
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G+ +L+ TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+
Sbjct: 302 NGQARVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNE 361
Query: 361 ELEWYLQIEKLIGKKL 376
E++ IE+LI + L
Sbjct: 362 EIKLLNDIERLINRVL 377
>gi|86750102|ref|YP_486598.1| DEAD/DEAH box helicase [Rhodopseudomonas palustris HaA2]
gi|86573130|gb|ABD07687.1| DEAD/DEAH box helicase [Rhodopseudomonas palustris HaA2]
Length = 516
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 225/375 (60%), Gaps = 13/375 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL D+++ A G+ TP+ IQ +AIPH L +D++G+AQTG+GKT AF LP+L
Sbjct: 2 SFNNLGLSDKVLAAVAASGYTTPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPML- 60
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+LE + +P +L PTRELA Q+ EQF+ G+G L A+L+GGV Q L
Sbjct: 61 TMLEKGRARARMPRTL--ILEPTRELAAQVKEQFDKYGAGQKLNVALLIGGVSFGDQDLK 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +++ATPGRL+DH T G L ++ L++DEADR+L+ F ++ + ++P
Sbjct: 119 LTRGVDVLIATPGRLLDH-TERGGLLLTGVEMLIIDEADRMLDMGFIPDIERVCKLVPFT 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFV---PAKYKDCYLV 245
RQT F+ATM +++++ L NP KIE + ST T+ Q P + ++
Sbjct: 178 RQTLFFTATMPPEIRRVTETFLHNPEKIEVSKPASTAVTVAQSQVACGREPHEKRETLRS 237
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS---GHMSQSKRLGALNKFKAG 302
I + ++F C+ R +AL+ ++L + + G M QS R AL++F+ G
Sbjct: 238 LIRAATDLQNAIIF---CNRKREVALLAKSLQKHGFSVGALHGDMDQSARTAALDQFRKG 294
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
E IL+ +DVA+RGLDIP V V N+D+P + DY+HRVGRT RAGR G AIS+V +
Sbjct: 295 ELPILVASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRVGRTGRAGRLGTAISIVAPSDQ 354
Query: 363 EWYLQIEKLIGKKLP 377
+ IEKLIGK++P
Sbjct: 355 KSIAAIEKLIGKEIP 369
>gi|170701603|ref|ZP_02892549.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
gi|170133486|gb|EDT01868.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
Length = 571
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/433 (40%), Positives = 246/433 (56%), Gaps = 13/433 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 86 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 145
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A SLR AV+ GGVDM Q
Sbjct: 146 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTSLRSAVVFGGVDMNPQ 204
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 205 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 263
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 264 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKHSAVV 323
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 324 QLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 383
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 384 ALVATDVAARGLDIVELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 443
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLL--LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIG 423
IEKLI + L E + L L R +R + + SG + +GG + D
Sbjct: 444 ADIEKLIKRPL------EVQTLALDKPSRHRHDERGGERAGERSGERAGERGGRRERDEH 497
Query: 424 RQFGINKKKLSKR 436
R + S+R
Sbjct: 498 RGASARRSGGSER 510
>gi|414887756|tpg|DAA63770.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 417
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 208/330 (63%), Gaps = 14/330 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL LV+ACE +G + P+ +Q IP AL G D++G+A+TGSGKT AFALPIL
Sbjct: 72 FADLGLSQWLVDACEALGMRRPTAVQRRCIPRALAGADVLGIAETGSGKTAAFALPILHR 131
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E+ V A L+PTRELA Q++EQF ALG+ + LRC +GG D + Q L
Sbjct: 132 L---GEDPYGVAAL---ALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLAQAKGL 185
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
+RPH+VVATPGR+ + N + K+LVLDEADR+L+ +FE+ L I +P+
Sbjct: 186 SRRPHVVVATPGRIATLVKNDPDLAKVFSRTKFLVLDEADRILDVNFEEELRVIFGCLPK 245
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT+LFSATM+ ++ L EA + TV+TLKQQY VP + K+ +L ++
Sbjct: 246 KRQTFLFSATMSDNLRSLLELSGNKSYFFEAYEGFKTVETLKQQYIHVPPQGKELHLWHL 305
Query: 248 L------TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
L TE S +VF TC + L L+L L A+ ++ H SQ++RL ALN+FK+
Sbjct: 306 LSVMKGKTEDPIRSAIVFVSTCKDCQYLDLLLEELRYPAVALNSHKSQAQRLSALNRFKS 365
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIP 331
G+ +L+ TDV SRGLDI +VD+VINYD+P
Sbjct: 366 GQVPVLLATDVGSRGLDIQTVDLVINYDMP 395
>gi|124265824|ref|YP_001019828.1| ATP-dependent RNA helicase 2 [Methylibium petroleiphilum PM1]
gi|124258599|gb|ABM93593.1| putative ATP-dependent RNA helicase 2 [Methylibium petroleiphilum
PM1]
Length = 494
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 229/370 (61%), Gaps = 5/370 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F L L +L+ A G+ + IQA+AIP L G+D++G AQTG+GKT AF+LP+LQ
Sbjct: 21 FDTLALDPKLLRAVAESGYLLMTPIQAKAIPLVLAGRDVMGAAQTGTGKTAAFSLPLLQK 80
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
+L+ E+ T PA A VL+PTRELA Q++ + LR V+ GG+DM QT
Sbjct: 81 MLK-HESSSTSPARHPVRALVLAPTRELADQVANNVKTYSKHTQLRATVVFGGIDMKPQT 139
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L + +++ATPGRL+DH+ K SL ++Y+VLDEADR+L+ F L IL+ +P
Sbjct: 140 AELKRGVEVLIATPGRLLDHI-EAKNCSLSQVEYVVLDEADRMLDIGFLPDLQRILSYLP 198
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT LFSAT + ++KKL + L++P+ +E A +T T++Q++ V K +
Sbjct: 199 KSRQTLLFSATFSPEIKKLANSYLQDPILVETARPNATASTVEQRFYRVEDDDKRNAVKQ 258
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L + + ++VF + LA G R + G SQ +RL AL FKAGE ++
Sbjct: 259 LLRTRAITQSIVFVNSKLGAARLARAFERDGLRTQALHGDKSQDERLKALAAFKAGEVDL 318
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + V N+D+P N++DY+HR+GRT RAG +G+AI+LV++ +
Sbjct: 319 LVATDVAARGLDIADLPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAITLVSRDDARLVS 378
Query: 367 QIEKLIGKKL 376
IEKLI KKL
Sbjct: 379 DIEKLIKKKL 388
>gi|373487181|ref|ZP_09577850.1| DEAD/DEAH box helicase domain protein [Holophaga foetida DSM 6591]
gi|372010063|gb|EHP10676.1| DEAD/DEAH box helicase domain protein [Holophaga foetida DSM 6591]
Length = 438
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 227/377 (60%), Gaps = 15/377 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL EL+ A G++TP+ IQA+AIP L+G+DL+G AQTG+GKT AF LP+LQ
Sbjct: 2 SFDTLGLLPELLRAVREQGYETPTPIQAQAIPVVLQGRDLMGGAQTGTGKTAAFTLPMLQ 61
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L A T PA A VL+PTRELA+Q+ E G I LR + GGV++ Q
Sbjct: 62 RLAPQASTS-TSPAKHPIRALVLTPTRELAMQVEESIRTYGKHIPLRSTTIFGGVNINPQ 120
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY-----LVLDEADRLLNDDFEKSLDE 180
AL K I+VATPGRL+DH GTL++ LVLDEADR+L+ F + + +
Sbjct: 121 IAALRKGVEILVATPGRLLDH------HQQGTLRFDQLEILVLDEADRMLDMGFIRDIKK 174
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL ++P RQ+ LFSAT + ++++L + LK+P ++ A + ST + +KQ V + K
Sbjct: 175 ILALLPAKRQSLLFSATFSGEIRELAASLLKDPASVDVAPRNSTTELVKQVVHPVDRERK 234
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
L +++ + +VFTRT LA L G A+ I G+ SQ +R+ AL+ FK
Sbjct: 235 RALLAHLIQTKNLEQVLVFTRTKHGANRLAEQLDKDGISALAIHGNKSQPQRIKALSDFK 294
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G +L+ TD+A+RGLDI + V+NY++P +DY+HR+GRT RAG G A+SLV
Sbjct: 295 QGNIRVLVATDIAARGLDIDQLPHVVNYELPQVPEDYVHRIGRTGRAGSEGEALSLVCVD 354
Query: 361 ELEWYLQIEKLIGKKLP 377
E + IE+L+ LP
Sbjct: 355 EHKLLKGIERLLKNPLP 371
>gi|334130724|ref|ZP_08504514.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
gi|333444124|gb|EGK72080.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
Length = 480
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 226/373 (60%), Gaps = 7/373 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ELGL EL+ A + G+ +P+ IQA+AIP L G+D++G AQTG+GKT +F LP+LQ
Sbjct: 2 SFEELGLIPELLRAVADTGYTSPTPIQAQAIPVVLAGRDVMGGAQTGTGKTASFTLPLLQ 61
Query: 69 ALLEIAENQRTVPA---FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
L A N PA A ++ PTRELA+Q+ E + + LR + + GGVDM Q
Sbjct: 62 RLAPHA-NSSPSPAKHPVRALIVCPTRELAMQVHESVKTYSKHLPLRSSCIYGGVDMKAQ 120
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + IVVATPGRL+DH+ K +LG ++ LVLDEADR+L+ F + IL ++
Sbjct: 121 VAELREGREIVVATPGRLLDHVEG-KTVNLGQVQMLVLDEADRMLDMGFIPDIKRILALL 179
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P RQ+ LFSAT ++++KKL +A L++P IE A + +T +T+ + K L
Sbjct: 180 PTQRQSLLFSATFSEEIKKLAQAMLRDPQLIEVARRNATAETITHRVHACDTDDKRALLT 239
Query: 246 YILTEVSASS--TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
++LT+ S + +VF T LA L G A I G SQ +R AL FK G
Sbjct: 240 HLLTQDSYADRQALVFVNTKFGASRLAHHLVRQGVAADAIHGDKSQQQRTEALEAFKNGS 299
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
+L+ TDVA+RGLDI + VIN+++P N++DY+HR+GRT RAGR+G AISL E
Sbjct: 300 VRVLVATDVAARGLDIEDLPFVINFELPHNAEDYVHRIGRTGRAGRSGEAISLAAPEEKG 359
Query: 364 WYLQIEKLIGKKL 376
IEKLI K +
Sbjct: 360 RVADIEKLIRKPI 372
>gi|320582192|gb|EFW96410.1| ATP-dependent RNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 428
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 242/414 (58%), Gaps = 23/414 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL LVE+ + + P+ IQA IP L+G+D IG A+TGSGKT AF P+L
Sbjct: 4 FASLGLPRWLVESLQAMKITRPTNIQAACIPEILKGRDCIGGAKTGSGKTIAFGAPML-- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
A+ + F VL+PTRELA+QI++QF ALG+ ++L+ +++GG M Q +
Sbjct: 62 ----AKWSQDPSGIFGLVLTPTRELAMQIADQFAALGATVNLKVRLIIGGESMTDQVAMI 117
Query: 130 GKRPHIVVATPGRL----MDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ PH ++ATPGRL M++ +G L +KYLVLDEADRLL D F L +
Sbjct: 118 KENPHFIIATPGRLAHIIMENEDECRG--LKRVKYLVLDEADRLLTDSFTDHLQTCFEAL 175
Query: 186 PRM--RQTYLFSATMTKKVKKLQR---ACLKNPVKIEAASKYSTV---DTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ A K PV + TV TL+ Y P
Sbjct: 176 PNSNKRQTLLFTATVTDSVRALKDRPVAPGKQPVFLHELDNVDTVKIPSTLRLLYVLAPV 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ L ILT + S+ +VF + +L +LR+L + M QS+R +
Sbjct: 236 VVKESMLHNILTNEDYKESTAIVFVNRSETAEILRRLLRHLEVTTTSLHSEMPQSERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++F+AG +L+ TD+ASRGLDIPSV++VIN+DIP + DY+HRVGRTARAGR G AIS
Sbjct: 296 LHRFRAGAARVLVATDLASRGLDIPSVELVINFDIPRDPDDYVHRVGRTARAGRKGDAIS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL-LLLERVTEAKRISQMTIKDSG 408
+V +L L IE +G K+ E P + +V+ L+ V++AK ++M ++ G
Sbjct: 356 MVTPNDLSRILAIEDRVGVKMEELPLSDNKVIKQSLKAVSKAKIEARMDMEREG 409
>gi|420137836|ref|ZP_14645791.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CIG1]
gi|403249405|gb|EJY62906.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CIG1]
Length = 449
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 224/380 (58%), Gaps = 7/380 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF LGL L++A E +G TP+ IQA+AIP AL+G+DL+ AQTG+GKT FALP+LQ
Sbjct: 2 TFASLGLLAPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + Q + A VL PTRELA Q+ G + LR AV GGV + Q +
Sbjct: 62 RL-TLEGPQVAANSVRALVLVPTRELAEQVHGSVRDYGQHLPLRTAVAYGGVSINPQMMK 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L L+ LVLDEADR+L+ F + LDE+ +PR
Sbjct: 121 LRKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT LFSAT + ++ L R L++P+ IE + + + +++Q V K K ++L
Sbjct: 180 RQTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+VF +T + L +L+ G A I G Q RL AL +FKAGE ++L+
Sbjct: 240 QANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLV 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDI + +V+N+D+P ++DY+HR+GRT RAG +G A+SLV E+E I
Sbjct: 300 ATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAI 359
Query: 369 EKLIGKKL-----PEFPAEE 383
E LIG+ L P+F E
Sbjct: 360 ETLIGQTLQRREEPDFEPEH 379
>gi|339326719|ref|YP_004686412.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
gi|338166876|gb|AEI77931.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
Length = 520
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 231/384 (60%), Gaps = 10/384 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A + V+TF GL ++ A G+ TP+ IQA+AIP L GKD++G AQTG+GKT
Sbjct: 32 AGQTAVQTFDSFGLDARILRALSEQGYTTPTPIQAQAIPVVLIGKDMMGAAQTGTGKTAG 91
Query: 62 FALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
FALPI+Q LL +A N PA A +L+PTRELA Q+ + LR V+ G
Sbjct: 92 FALPIIQRLLPLA-NASASPARHPVRALMLTPTRELADQVYDNVARYAKHTDLRSTVVFG 150
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
GVDM QT AL + I+VATPGRL+DH+ K +L ++ LVLDEADR+L+ F L
Sbjct: 151 GVDMNPQTDALRRGVEILVATPGRLLDHVQQ-KSVNLSQVQMLVLDEADRMLDMGFLPDL 209
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
I+N++P RQT LFSAT + ++K+L + LK+PV IE A ST + ++Q V
Sbjct: 210 QRIINLLPAHRQTLLFSATFSPEIKRLASSYLKHPVTIEVARSNSTNENVRQMVYLVEDG 269
Query: 239 YKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
+K +V++L + + + +VF + LA L G A I G +Q++R+
Sbjct: 270 HKQAAVVHLLKQRAEQGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQ 329
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
L FK+G + L+ TDVA+RGLDIP + V+N+D+P +++DY+HR+GRT RAG +G A+
Sbjct: 330 TLEGFKSGTIDALVATDVAARGLDIPDMPCVVNFDVPYSAEDYVHRIGRTGRAGASGDAL 389
Query: 355 SLVNQYELEWYLQ-IEKLIGKKLP 377
S+ E L IEKLI + +P
Sbjct: 390 SIYVPGNDERLLSDIEKLIKRSIP 413
>gi|113868675|ref|YP_727164.1| ATP-dependent helicase [Ralstonia eutropha H16]
gi|113527451|emb|CAJ93796.1| ATP-dependent helicase, superfamily II DNA and RNA helicase
[Ralstonia eutropha H16]
Length = 520
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 231/384 (60%), Gaps = 10/384 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A + V+TF GL ++ A G+ TP+ IQA+AIP L GKD++G AQTG+GKT
Sbjct: 32 AGQTAVQTFDSFGLDARILRALSEQGYTTPTPIQAQAIPVVLIGKDMMGAAQTGTGKTAG 91
Query: 62 FALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
FALPI+Q LL +A N PA A +L+PTRELA Q+ + LR V+ G
Sbjct: 92 FALPIIQRLLPLA-NASASPARHPVRALMLTPTRELADQVYDNVARYAKHTDLRSTVVFG 150
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
GVDM QT AL + I+VATPGRL+DH+ K +L ++ LVLDEADR+L+ F L
Sbjct: 151 GVDMNPQTDALRRGVEILVATPGRLLDHVQQ-KSVNLSQVQMLVLDEADRMLDMGFLPDL 209
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK 238
I+N++P RQT LFSAT + ++K+L + LK+PV IE A ST + ++Q V
Sbjct: 210 QRIINLLPAHRQTLLFSATFSPEIKRLASSYLKHPVTIEVARSNSTNENVRQMVYLVEDG 269
Query: 239 YKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 294
+K +V++L + + + +VF + LA L G A I G +Q++R+
Sbjct: 270 HKQAAVVHLLKQRAEQGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQ 329
Query: 295 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 354
L FK+G + L+ TDVA+RGLDIP + V+N+D+P +++DY+HR+GRT RAG +G A+
Sbjct: 330 TLEGFKSGTIDALVATDVAARGLDIPDMPCVVNFDVPYSAEDYVHRIGRTGRAGASGDAL 389
Query: 355 SLVNQYELEWYLQ-IEKLIGKKLP 377
S+ E L IEKLI + +P
Sbjct: 390 SIYVPGNDERLLSDIEKLIKRSIP 413
>gi|300779365|ref|ZP_07089223.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
gi|300504875|gb|EFK36015.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
Length = 434
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 223/370 (60%), Gaps = 6/370 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
F +L L + + +A + G+ TP+ IQ +IP L+G+D +G AQTG+GKT AF++PILQ
Sbjct: 2 NFTDLNLIEPIAKAIQEQGYTTPTPIQERSIPDILDGRDFLGCAQTGTGKTAAFSIPILQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L ++N+ A +L+PTRELAIQI E A G + L+ V+ GGV Q A
Sbjct: 62 NL---SKNKIPNKHIKALILTPTRELAIQIEENINAYGKYLPLKQLVIFGGVKQGNQEAA 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L K I+VATPGRL+D + +G SL L+ VLDEADR+L+ F + ++ ++P+
Sbjct: 119 LKKGVDILVATPGRLLDFIA--QGIISLKNLEIFVLDEADRMLDMGFVHDVKRVIKLLPQ 176
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT FSATM +++KL + L NPVK+E ST DT+KQ FV K L +I
Sbjct: 177 RRQTLFFSATMPGEIQKLANSILNNPVKVEVTPVSSTADTIKQSVYFVEKDNKLNLLSHI 236
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S +VF RT ++ L+ A I G+ SQ+ R ALN FK+G+ +L
Sbjct: 237 LKNDISDSVLVFARTKHGADKISRKLQKDNISAEAIHGNKSQNARQNALNNFKSGKTRVL 296
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+A+RG+DI + VIN+++ S+ Y+HR+GRT RAG G +IS V+ +L
Sbjct: 297 VATDIAARGIDIDELKFVINFELSDVSETYVHRIGRTGRAGAEGTSISFVDGLDLLNLKN 356
Query: 368 IEKLIGKKLP 377
EKLIGKK+P
Sbjct: 357 TEKLIGKKIP 366
>gi|403217916|emb|CCK72408.1| hypothetical protein KNAG_0K00400 [Kazachstania naganishii CBS
8797]
Length = 432
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 246/429 (57%), Gaps = 22/429 (5%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M + +F +LGL L ++ + + TP+ +Q IP L+G++ IG A+TGSGKT
Sbjct: 1 MPTAQHTMSFADLGLAHWLCDSLQAMRIHTPTDVQTHCIPPILKGRNCIGGARTGSGKTL 60
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFA P+L E R A F VL+PTRELA+QI EQ ALG+ +++RCA++VGG
Sbjct: 61 AFAGPML------TEWSRDPAALFGVVLTPTRELAVQIHEQLCALGAQLNIRCALVVGGG 114
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHL-TNTKGFSLGTL-----KYLVLDEADRLLNDDF 174
D +QQ+L L RPH +VATPGRL H+ ++T +L +L +YLVLDEAD LL F
Sbjct: 115 DFVQQSLELQGRPHFIVATPGRLAHHIISDTPEAALSSLLKRYTRYLVLDEADFLLTPTF 174
Query: 175 EKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQR--ACLKNPVKIE--AASKYSTVDTL 228
L IL +P R+T LF+AT+T +V +L+ A + N A + DTL
Sbjct: 175 ASDLAVILGALPDKTHRRTLLFTATVTDQVLQLREGDAFVYNAEDDSQLAPGRRQLPDTL 234
Query: 229 KQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGH 286
+Y VP K+ YL +IL E S+ +VF LL L LG R +
Sbjct: 235 TAEYLLVPEHVKEAYLYHILVSNEFEDSTAVVFVNRTRTAELLRRTLYQLGVRVTSLHSQ 294
Query: 287 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 346
M QS+R +L++F+A +L+ TDVA+RGLDIP V +V+NYD+P++ ++HRVGRTAR
Sbjct: 295 MPQSERANSLHRFRARAARVLVATDVAARGLDIPQVSLVVNYDVPSDPDTFVHRVGRTAR 354
Query: 347 AGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLERVTEAKRISQMTI 404
AGR G ++ V Q +++ IE + + +F + ++ L + ++AKR + M +
Sbjct: 355 AGRHGESVLFVTQRDVDRLHAIETRVATTIGQFSRVGDTAVIKKSLTQTSKAKRTAMMAM 414
Query: 405 KDSGNKRRR 413
+ G RR
Sbjct: 415 EREGFGERR 423
>gi|365122316|ref|ZP_09339220.1| hypothetical protein HMPREF1033_02566 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642816|gb|EHL82156.1| hypothetical protein HMPREF1033_02566 [Tannerella sp.
6_1_58FAA_CT1]
Length = 421
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 225/371 (60%), Gaps = 4/371 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L L + ++ A ++ G+ TP+ IQA+AIP L+GKDL+G AQTG+GKT AF++PI+Q
Sbjct: 3 FENLKLTEPVLRALQDEGYITPTPIQAKAIPCVLDGKDLLGCAQTGTGKTAAFSIPIIQN 62
Query: 70 LL-EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL E N R + A +L+PTRELA QI + A L+ V+ GGV Q A
Sbjct: 63 LLAEAGGNGRR--SVRALILTPTRELAAQIGDNINAYSRHTRLKHTVIFGGVSQKSQVEA 120
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L + K L T+++ VLDEADR+L+ F + +IL ++PR
Sbjct: 121 LRKGVDILVATPGRLLD-LVSQKIIDLQTIRFFVLDEADRMLDMGFIHDIKKILLLLPRK 179
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ+ FSATM +++KL R L +P IE STVD ++Q V K L+++L
Sbjct: 180 RQSLFFSATMPAEIEKLSRQILNHPEMIEVTPASSTVDVIEQHVYSVEKADKSKLLLHLL 239
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + S +VFTRT +A +L G +A I G+ SQ+ R+ ALN F+ +LI
Sbjct: 240 QDKNIESVLVFTRTKHGADKVARILGRSGVKAEAIHGNKSQNARVKALNNFRDHITRVLI 299
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+ G+DI + VINYD+P + Y+HR+GRT RAGR+G A S + E + I
Sbjct: 300 ATDIAAWGIDIDHLSHVINYDLPNIPETYVHRIGRTGRAGRSGAAFSFCDSEEKVYLRDI 359
Query: 369 EKLIGKKLPEF 379
EKL GK + E
Sbjct: 360 EKLTGKHIAEI 370
>gi|84393512|ref|ZP_00992267.1| ATP-dependent RNA helicase [Vibrio splendidus 12B01]
gi|84375865|gb|EAP92757.1| ATP-dependent RNA helicase [Vibrio splendidus 12B01]
Length = 423
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 222/372 (59%), Gaps = 2/372 (0%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
++F +LGL ++L+ + + P+ +Q +AIP LEGKD++ AQTG+GKT AF LPI+
Sbjct: 6 RSFNQLGLSEQLLTTLSELNFTAPTSVQEQAIPLVLEGKDVLAGAQTGTGKTAAFGLPII 65
Query: 68 QALLEIAENQRTVPAFF-ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
Q L+E +N P A VL PTRELA Q+ + + G ++ V GGV M QT
Sbjct: 66 QRLIETKDNVIPNPKLVRALVLVPTRELAQQVFDNVTSYAKGTDIKVVVAYGGVSMKVQT 125
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L I+VATPGRL+DH+ TK L + LVLDEADR+L+ F + IL+ +
Sbjct: 126 DNLRGGADILVATPGRLIDHMF-TKNIMLSQTEVLVLDEADRMLDMGFMPDIKRILSRMN 184
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+RQT FSAT K+K L +++P +I+ K ST DT+ Q V K L Y
Sbjct: 185 DVRQTLFFSATFDNKIKALAHRMMQSPSEIQVTPKNSTADTVTQMVYPVDKSRKSELLAY 244
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ + +VFT+T T L L+ G +A I+G SQ R AL+ FK+G+
Sbjct: 245 LIGSKNWQQVLVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRA 304
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVA+RG+DI ++ V+NYD+P ++DY+HR+GRT RAG TG+AISL++Q E
Sbjct: 305 LIATDVAARGIDIQQLEQVVNYDMPFKAEDYVHRIGRTGRAGNTGLAISLMSQDEAYLLG 364
Query: 367 QIEKLIGKKLPE 378
IE+L+ +LP+
Sbjct: 365 DIERLLDTRLPQ 376
>gi|379011900|ref|YP_005269712.1| ATP-dependent RNA helicase RhlE [Acetobacterium woodii DSM 1030]
gi|375302689|gb|AFA48823.1| ATP-dependent RNA helicase RhlE [Acetobacterium woodii DSM 1030]
Length = 430
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/434 (39%), Positives = 245/434 (56%), Gaps = 14/434 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ L + + +A + G+ + IQ +AIP LEGKDL+G AQTG+GKT AFA+PILQ
Sbjct: 3 FENLNIIQPIQKALKAEGYTEATPIQEKAIPSLLEGKDLLGCAQTGTGKTAAFAIPILQG 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L N + A VL+PTRELA+QIS+ F+A G + L+ V+ GGV QT AL
Sbjct: 63 LSYEQRNLKGNRPIKALVLAPTRELALQISDSFKAYGKYLGLKTLVIYGGVSQNAQTKAL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
I+VATPGRL+D L N K L +K VLDEAD +L+ + + +I+ +P R
Sbjct: 123 SSGVDILVATPGRLLD-LINQKYIKLNQIKSFVLDEADMMLDMGMLQDVRKIIKHMPVER 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q LFSATM +++ KL + LKNP K+ S V+ ++Q +V K L+++L
Sbjct: 182 QNMLFSATMPQEIAKLSGSILKNPTKVTITPVSSAVEIIEQNVYYVNKNNKINLLIHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S +VF+RT + L G +A I G+ SQ+ R ALN FK + IL+
Sbjct: 242 NKEIVSALVFSRTKHGADKIVKHLERAGFKAQAIHGNKSQNARQLALNNFKERKTRILVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+DI + V NYD+P + Y+HR+GRT RAG G+AI+ +Q E+ IE
Sbjct: 302 TDIAARGIDIEELSHVFNYDLPEVPETYVHRIGRTGRAGLGGIAIAFCDQEEMPLLKSIE 361
Query: 370 KLIGKKLP-----EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR---RRKGGDEDDD 421
KL+ K +P FP + LL T ++R + ++S N R + GG +D D
Sbjct: 362 KLVSKSIPVVEVHPFPLVQVSSELL---ATSSRRSNDYQSRNSKNTRSNGKSGGGKKDRD 418
Query: 422 IGRQFGINKKKLSK 435
R + NKKK SK
Sbjct: 419 --RFYSKNKKKDSK 430
>gi|257899462|ref|ZP_05679115.1| helicase [Enterococcus faecium Com15]
gi|293573030|ref|ZP_06683972.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430842364|ref|ZP_19460279.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|431081588|ref|ZP_19495678.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|431118220|ref|ZP_19498174.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|431592214|ref|ZP_19521450.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|431738949|ref|ZP_19527889.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|431740772|ref|ZP_19529683.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
gi|257837374|gb|EEV62448.1| helicase [Enterococcus faecium Com15]
gi|291606932|gb|EFF36312.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430493445|gb|ELA69748.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|430565520|gb|ELB04666.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|430568177|gb|ELB07234.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|430591839|gb|ELB29866.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|430596492|gb|ELB34316.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|430602855|gb|ELB40405.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
Length = 503
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 229/381 (60%), Gaps = 12/381 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQAE IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPEQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +K+P ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKSPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKNGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF-PAEEEEVL 387
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKEAF 374
>gi|294775629|ref|ZP_06741138.1| ATP-dependent RNA helicase RhlE [Bacteroides vulgatus PC510]
gi|345518166|ref|ZP_08797621.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 4_3_47FAA]
gi|423314906|ref|ZP_17292838.1| hypothetical protein HMPREF1058_03450 [Bacteroides vulgatus
CL09T03C04]
gi|254836435|gb|EET16744.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 4_3_47FAA]
gi|294450571|gb|EFG19062.1| ATP-dependent RNA helicase RhlE [Bacteroides vulgatus PC510]
gi|392681088|gb|EIY74450.1| hypothetical protein HMPREF1058_03450 [Bacteroides vulgatus
CL09T03C04]
Length = 434
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 230/369 (62%), Gaps = 5/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL L + +++A + G+ TP+ IQ +AIP L+GKDL+G AQTG+GKT AFA+P++Q
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +++++ + A +L+PTRELAIQI E F+ ++ AV+ GGV Q A
Sbjct: 62 RLYQ-SDHKKGIKAL---ILTPTRELAIQIGENFDQYAGYTGVKHAVIFGGVPQKAQVDA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +++ATPGRL+D L + SL L+Y VLDEADR+L+ F + ++L +IP
Sbjct: 118 LKRGVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPAR 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++KL + L NP KIE STVDT++Q FV K K L+++L
Sbjct: 177 RQTLFFSATMPSEIEKLADSMLTNPEKIEVTPVSSTVDTIRQSVYFVEKKEKKDLLLHLL 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S ++FTRT LA +L A I G+ SQ+ R AL FK +LI
Sbjct: 237 KNPEIESVLIFTRTKHGADKLARILNKSEIGAEAIHGNKSQNARQRALTNFKDHTTRVLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P S+ Y+HR+GRT RAG G+AIS EL + I
Sbjct: 297 ATDIAARGIDVNQLSHVINYELPNISETYVHRIGRTGRAGHDGIAISFCESEELPYLKDI 356
Query: 369 EKLIGKKLP 377
+KLIG ++P
Sbjct: 357 QKLIGLQIP 365
>gi|327307374|ref|XP_003238378.1| ATP-dependent RNA helicase DBP8 [Trichophyton rubrum CBS 118892]
gi|326458634|gb|EGD84087.1| ATP-dependent RNA helicase DBP8 [Trichophyton rubrum CBS 118892]
Length = 528
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/435 (40%), Positives = 260/435 (59%), Gaps = 32/435 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + + K P+ IQ IP ++G+D IG ++TGSGKT AFA PIL
Sbjct: 100 SFSSLGLASWLVSSLKAMEIKRPTAIQKSCIPEIMKGRDCIGGSRTGSGKTVAFAAPILH 159
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ +E+ V +A +L+PTRELA+QI EQ +A+ + SL+ ++ GG DM Q +
Sbjct: 160 ---KWSEDPFGV---YAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIG 213
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYLVLDEADRLLNDDFEKSLDEI---L 182
L +RPHIV+ATPGRL DH+ ++ L ++ +VLDEADRLL L ++ L
Sbjct: 214 LSQRPHIVIATPGRLADHIKSSGEDTIIGLKRVRMVVLDEADRLLTSGPGSMLPDVETCL 273
Query: 183 NVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPVKIEAASKYSTV--DTLKQQYRFV 235
+ +P RQT LF+AT+T +V+ L+ RA K P+ + S +T TLKQ Y V
Sbjct: 274 SALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKLPIFVSEISTENTTIPPTLKQTYLQV 333
Query: 236 PAKYKDCYLVYILTE--VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P +++ +L +L+ S+ ST++F LL +LR L R + + QS+R+
Sbjct: 334 PLNHREAFLHVLLSTGGNSSKSTIIFCNRTKTADLLERILRRLSHRVTSLHSLLPQSERV 393
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
L++F+A +L+ TDVA+RGLDIPSV +VINYD+P N DYIHRVGRTARAGR G A
Sbjct: 394 ANLSRFRASAARLLVATDVAARGLDIPSVGLVINYDVPRNPDDYIHRVGRTARAGREGEA 453
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
I+LV Q +++ L IE +GK++ + EE V + E++ + +K+ G+ +R
Sbjct: 454 ITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI------ESRIVKGTVLKEVGSTKRE 505
Query: 414 KGGDED---DDIGRQ 425
G+ D D +GR+
Sbjct: 506 AMGEIDEGRDVLGRR 520
>gi|193212728|ref|YP_001998681.1| DEAD/DEAH box helicase domain-containing protein [Chlorobaculum
parvum NCIB 8327]
gi|193086205|gb|ACF11481.1| DEAD/DEAH box helicase domain protein [Chlorobaculum parvum NCIB
8327]
Length = 427
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 216/367 (58%), Gaps = 2/367 (0%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F LGL D L++A + G+ +P+ IQAEAIP LEG DL+G AQTG+GKT AFALPILQ
Sbjct: 3 FSALGLIDPLLKALDEEGYSSPTPIQAEAIPLLLEGHDLLGCAQTGTGKTAAFALPILQL 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L + E+ R VL+PTRELA+QI E FEA G L+ V+ GGV+ QT L
Sbjct: 63 LHQDQEHGRKR-KIRCLVLTPTRELALQIGESFEAYGRHTGLKSTVIFGGVNQNPQTRTL 121
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
I+VATPGRL+D L + L ++Y VLDEADR+L+ F + ++L +P+ +
Sbjct: 122 AGGVDILVATPGRLLD-LMGQEHLHLRDIEYFVLDEADRMLDMGFIHDVKKVLAALPKKK 180
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
Q+ FSATM + L + L P K+ ST + + Q FV + K+ L ++L
Sbjct: 181 QSLFFSATMPPAIVNLAASILHQPKKVTVTPVSSTAEIINQHILFVDRENKNSLLEHLLQ 240
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
SS + FTRT +A L +A I G+ SQ+ R AL FK+GE +L+
Sbjct: 241 NRDISSVLAFTRTKHGADKVAKFLTRKNIKAEAIHGNKSQNARQRALGNFKSGETRVLVA 300
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ ++ VIN D+P ++ Y+HR+GRT RAG G A S N E E+ IE
Sbjct: 301 TDIAARGIDVDDLEYVINIDLPNVAETYVHRIGRTGRAGNRGTAYSFCNAEEKEYLRDIE 360
Query: 370 KLIGKKL 376
KLI K +
Sbjct: 361 KLIDKSI 367
>gi|373950799|ref|ZP_09610760.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
gi|386323368|ref|YP_006019485.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
gi|333817513|gb|AEG10179.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
gi|373887399|gb|EHQ16291.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
Length = 515
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 222/368 (60%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL +++A G+ TPS IQA+AIP L+GKD++ AQTG+GKT F LP+L+
Sbjct: 2 SFTSLGLSAPILKAVAEQGYDTPSPIQAQAIPAVLQGKDVMAAAQTGTGKTAGFTLPMLE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + N+ A VL+PTRELA Q++E E G + LR AV+ GGV + Q
Sbjct: 62 LLSK--GNRAQAGQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGVPINPQIAK 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L ++VATPGRLMD L N K L+ LVLDEADR+L+ F + + +IL ++P+
Sbjct: 120 LRHGVDVLVATPGRLMD-LYNQKAVKFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQ 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ +FSAT + ++++L + + NPV+I + + T+KQ V K L+ ++
Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKSQKSALLIQLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF+RT LA L + G +A I G+ SQ+ R AL FK G+ +L+
Sbjct: 239 KQNDWQQVLVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+ E++ I
Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDI 358
Query: 369 EKLIGKKL 376
E+LI + L
Sbjct: 359 ERLINRVL 366
>gi|392988049|ref|YP_006486642.1| DEAD/DEAH box helicase [Enterococcus hirae ATCC 9790]
gi|392335469|gb|AFM69751.1| DEAD-box ATP dependent DNA helicase [Enterococcus hirae ATCC 9790]
Length = 503
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 227/379 (59%), Gaps = 13/379 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQ+E IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALSGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I N+ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDTNRHELQGL---VIAPTRELAIQTQEELYRLGRDKRVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + ++ I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVETLVLDEADEMLNMGFLEDIENIISKVPEER 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +K+P ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKSPTHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKNGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMSYLHV 353
Query: 368 IEKLIGKKLPEF--PAEEE 384
IE L K++ P E+E
Sbjct: 354 IENLTKKRMATLRPPTEKE 372
>gi|387902864|ref|YP_006333203.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
gi|387577756|gb|AFJ86472.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
Length = 493
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 238/419 (56%), Gaps = 13/419 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A +LR AV+ GGVDM Q
Sbjct: 72 RLLPHASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 190 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 250 QLLRGRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGR 424
IEKLI + L EV L R + ++ +R +GG D D R
Sbjct: 370 ADIEKLIKRPL--------EVQTLALDKPARHRHDERGERNERGERSERGGRRDRDEHR 420
>gi|402077170|gb|EJT72519.1| ATP-dependent RNA helicase DRS1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 827
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 220/354 (62%), Gaps = 6/354 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ + L ++ +VG+ P+ IQA+AIP AL GKD++G AQTGSGKTGAF +PIL+
Sbjct: 284 SFQGMSLSRPILRGLASVGFGKPTPIQAKAIPMALMGKDVVGGAQTGSGKTGAFMVPILE 343
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LL + VP VL+PTRELAIQ L S ++ + VGG+ + Q
Sbjct: 344 RLLY---RPKKVPTSRVVVLTPTRELAIQCHAVAIKLASHTDIKFCLAVGGLSLKVQEAE 400
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L RP +++ATPGR +DH+ N+ F++ T++ LVLDEADR+L D F L+EIL +P+
Sbjct: 401 LRLRPDVIIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKS 460
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAKYKD--CYLV 245
RQT LFSATMT V L RA L PV+I S+ TV TL Q++ R P + + YLV
Sbjct: 461 RQTMLFSATMTSSVDTLIRAGLNKPVRIMVDSQKKTVGTLVQEFVRLRPGREEKRMGYLV 520
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ ++ ++F R ++ LG + G M+Q++R+ ++ F+ G+ +
Sbjct: 521 HLCKKLYTERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMNQTQRIQSVEDFRDGKVS 580
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 359
L+ TD+ASRGLDI VD VINY+ P + + Y+HRVGRTARAGR+GVA++L +
Sbjct: 581 FLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGVAVTLAAE 634
>gi|81429227|ref|YP_396228.1| ATP-dependent RNA helicase [Lactobacillus sakei subsp. sakei 23K]
gi|78610870|emb|CAI55922.1| Putative ATP-dependent RNA helicase [Lactobacillus sakei subsp.
sakei 23K]
Length = 530
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 221/383 (57%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL + +++A G++ + IQ E IP AL GKD+IG AQTG+GKT AF LPILQ
Sbjct: 3 FSELGLSEPIMKAISRAGFEEATPIQGETIPLALAGKDVIGQAQTGTGKTAAFGLPILQN 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L P A ++SPTRELAIQ E+ LG + V+ GG D+ +Q +L
Sbjct: 63 L------DLDNPDIQALIISPTRELAIQTQEELYRLGRDRKAKVQVVYGGADIRRQIRSL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
P I+V TPGRL+DH+ N + L +K LVLDEAD +L+ F ++ I+ +P R
Sbjct: 117 KDHPQILVGTPGRLLDHI-NRRTVKLDHVKTLVLDEADEMLDMGFVDDIESIIKQVPEKR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSAT+ + K+ ++ + NP I+ SK T D + Q Y + KD I+T
Sbjct: 176 QTLLFSATLPAPIMKIGKSFMTNPEMIKVKSKELTADLIDQYY----VRAKDFEKFDIMT 231
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ S T++F RT L L+ G A I G +SQ KR+ L FKAG +
Sbjct: 232 RLFDVQSPELTLIFGRTKRRVDELTRGLKARGYNAEGIHGDLSQQKRMSVLKSFKAGRLD 291
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVA+RGLDI V V NYDIP + Y+HR+GRT RAG++GV+++ V E+E+
Sbjct: 292 VLVATDVAARGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGKSGVSVTFVTPNEMEYL 351
Query: 366 LQIEKLIGKK-LPEFPAEEEEVL 387
IE+L K+ LP P E+E
Sbjct: 352 RIIEELTKKRMLPLQPPSEKEAF 374
>gi|386342411|ref|YP_006038777.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|334864812|gb|AEH15283.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 515
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 222/368 (60%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL +++A G+ TPS IQA+AIP L+GKD++ AQTG+GKT F LP+L+
Sbjct: 2 SFTSLGLSAPILKAVAEQGYDTPSPIQAQAIPAVLQGKDVMAAAQTGTGKTAGFTLPMLE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + N+ A VL+PTRELA Q++E E G + LR AV+ GGV + Q
Sbjct: 62 LLSK--GNRAQAGQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGVPINPQIAK 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L ++VATPGRLMD L N K L+ LVLDEADR+L+ F + + +IL ++P+
Sbjct: 120 LRHGVDVLVATPGRLMD-LYNQKAVKFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQ 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ +FSAT + ++++L + + NPV+I + + T+KQ V K L+ ++
Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKSQKSALLIQLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF+RT LA L + G +A I G+ SQ+ R AL FK G+ +L+
Sbjct: 239 KQNDWQQVLVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+ E++ I
Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDI 358
Query: 369 EKLIGKKL 376
E+LI + L
Sbjct: 359 ERLINRVL 366
>gi|407782464|ref|ZP_11129676.1| DEAD/DEAH box helicase [Oceanibaculum indicum P24]
gi|407205829|gb|EKE75795.1| DEAD/DEAH box helicase [Oceanibaculum indicum P24]
Length = 515
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 225/375 (60%), Gaps = 8/375 (2%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL +++A G++TP+ IQA+AIP L G+DL+G+AQTG+GKT AFALPIL
Sbjct: 4 FTDLGLSAPILKAVTAEGYETPTPIQAQAIPPVLTGRDLMGIAQTGTGKTAAFALPILNR 63
Query: 70 LLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L E + +T +C +LSPTRELA QI+E F G ++L A + GGV Q
Sbjct: 64 LTEEGNHIKTPRG--SCRVLILSPTRELASQIAESFRVYGKFLNLSVATVFGGVSAGPQA 121
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
AL + IVVATPGRL+DHL N + L ++ VLDEAD++L+ F + + I+ +P
Sbjct: 122 KALQRGVDIVVATPGRLIDHLQN-RVVRLDQVEIFVLDEADQMLDMGFIQPIRRIVKTLP 180
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQ FSATM ++++ L L +P K+ ST + + QQ FVP K L
Sbjct: 181 AKRQNLFFSATMPREIETLAGELLHDPAKVAVTPVASTAERVSQQVIFVPTGLKRALLAD 240
Query: 247 ILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
+L+ ++ T+VFTRT + L G + I G+ SQS+R AL F+ G C
Sbjct: 241 LLSDAQMGFGRTLVFTRTKHGADKVVRYLEGAGIVSAAIHGNKSQSQRERALLAFRDGAC 300
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
+LI TD+A+RG+D+ V VINYD+P ++ Y+HR+GRTARAG G+AIS ++ E +
Sbjct: 301 KVLIATDIAARGIDVDGVTHVINYDLPNIAESYVHRIGRTARAGADGMAISFCDREERAY 360
Query: 365 YLQIEKLIGKKLPEF 379
IEKL +K+PE
Sbjct: 361 LRDIEKLTRQKVPEL 375
>gi|217972086|ref|YP_002356837.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
gi|217497221|gb|ACK45414.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
Length = 515
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 222/368 (60%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL +++A G+ TPS IQA+AIP L+GKD++ AQTG+GKT F LP+L+
Sbjct: 2 SFTSLGLSAPILKAVAEQGYDTPSPIQAQAIPAVLQGKDVMAAAQTGTGKTAGFTLPMLE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + N+ A VL+PTRELA Q++E E G + LR AV+ GGV + Q
Sbjct: 62 LLSK--GNRAQAGQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGVPINPQIAK 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L ++VATPGRLMD L N K L+ LVLDEADR+L+ F + + +IL ++P+
Sbjct: 120 LRHGVDVLVATPGRLMD-LYNQKAVKFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQ 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ +FSAT + ++++L + + NPV+I + + T+KQ V K L+ ++
Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKSQKSALLIQLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF+RT LA L + G +A I G+ SQ+ R AL FK G+ +L+
Sbjct: 239 KQNDWQQVLVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+ E++ I
Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDI 358
Query: 369 EKLIGKKL 376
E+LI + L
Sbjct: 359 ERLINRVL 366
>gi|120556730|ref|YP_961081.1| DEAD/DEAH box helicase [Marinobacter aquaeolei VT8]
gi|120326579|gb|ABM20894.1| DEAD/DEAH box helicase domain protein [Marinobacter aquaeolei VT8]
Length = 443
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 221/369 (59%), Gaps = 4/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL ++LV A + G++TPS IQ +AIP L GKD++ AQTG+GKT F LP+LQ
Sbjct: 2 SFSSLGLSEQLVRATADQGYETPSPIQQQAIPAVLSGKDVMAAAQTGTGKTAGFTLPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L AEN RT A +L+PTRELA Q+ + + + AV+ GGV + Q +
Sbjct: 62 RL---AENPRTGKGPRALILTPTRELAAQVHDSVNLYSKYVPTKAAVVFGGVKINPQMMK 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K ++VATPGRLMD L ++ LVLDEADR+L+ F + + +IL ++P
Sbjct: 119 LRKGLDVLVATPGRLMD-LYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILALLPAK 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT + +++ L + L NPV++E A++ +T + +KQ V K L ++
Sbjct: 178 RQNLLFSATFSNEIRTLAQGLLDNPVQVEVAARNTTAEKVKQSVYPVDQSQKTALLSKLV 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ + +VFTRT L L G A I G+ SQ R AL FKAGE +L+
Sbjct: 238 RDNAWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLV 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+++P +DY+HR+GRT RAG +G A+SLV+ E + I
Sbjct: 298 ATDIAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKLLAGI 357
Query: 369 EKLIGKKLP 377
EKLI K+LP
Sbjct: 358 EKLIKKQLP 366
>gi|385203300|ref|ZP_10030170.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
gi|385183191|gb|EIF32465.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
Length = 491
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 227/371 (61%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A + G+ P+ IQ +AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQ 71
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ +A +LR AV+ GGVDM Q
Sbjct: 72 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQ 130
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
+ L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 131 SEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 189
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L++P IE A ST ++Q V K +V
Sbjct: 190 PKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVAEGDKTGAVV 249
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++ E +VF + LA L G A I G SQ++R+ AL+ FK GE
Sbjct: 250 QLIRERGLKQVIVFCNSKIGASRLARSLERDGVIATAIHGDRSQNERMQALDAFKRGEIE 309
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG +G A+SL + E +
Sbjct: 310 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQL 369
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 370 ADIEKLIKRPL 380
>gi|150002994|ref|YP_001297738.1| ATP-dependent RNA helicase DeaD [Bacteroides vulgatus ATCC 8482]
gi|149931418|gb|ABR38116.1| ATP-dependent RNA helicase DeaD [Bacteroides vulgatus ATCC 8482]
Length = 434
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 230/369 (62%), Gaps = 5/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL L + +++A + G+ TP+ IQ +AIP L+GKDL+G AQTG+GKT AFA+P++Q
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + +++++ + A +L+PTRELAIQI E F+ ++ AV+ GGV Q A
Sbjct: 62 RLYQ-SDHKKGIKAL---ILTPTRELAIQIGENFDQYAGYTGVKHAVIFGGVPQKAQVDA 117
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L + +++ATPGRL+D L + SL L+Y VLDEADR+L+ F + ++L +IP
Sbjct: 118 LKRGVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPAR 176
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQT FSATM +++KL + L NP KIE STVDT++Q FV K K L+++L
Sbjct: 177 RQTLFFSATMPSEIEKLADSMLTNPEKIEVTPVSSTVDTIRQSVYFVEKKEKKDLLLHLL 236
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
S ++FTRT LA +L A I G+ SQ+ R AL FK +LI
Sbjct: 237 KNPEIESVLIFTRTKHGADKLARILNKSEIGAEAIHGNKSQNARQRALTNFKDHTTRVLI 296
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RG+D+ + VINY++P S+ Y+HR+GRT RAG G+AIS EL + I
Sbjct: 297 ATDIAARGIDVNQLSHVINYELPNISETYVHRIGRTGRAGHDGIAISFCESEELPYLKDI 356
Query: 369 EKLIGKKLP 377
+KLIG ++P
Sbjct: 357 QKLIGLQIP 365
>gi|378707268|ref|YP_005272162.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|418024343|ref|ZP_12663326.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|315266257|gb|ADT93110.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|353536303|gb|EHC05862.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 514
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 222/368 (60%), Gaps = 3/368 (0%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL +++A G+ TPS IQA+AIP L+GKD++ AQTG+GKT F LP+L+
Sbjct: 2 SFTSLGLSAPILKAVAEQGYDTPSPIQAQAIPAVLQGKDVMAAAQTGTGKTAGFTLPMLE 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + N+ A VL+PTRELA Q++E E G + LR AV+ GGV + Q
Sbjct: 62 LLSK--GNRAQAGQVRALVLTPTRELAAQVAESVETYGKNLPLRSAVIFGGVPINPQIAK 119
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L ++VATPGRLMD L N K L+ LVLDEADR+L+ F + + +IL ++P+
Sbjct: 120 LRHGVDVLVATPGRLMD-LYNQKAVKFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQ 178
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ +FSAT + ++++L + + NPV+I + + T+KQ V K L+ ++
Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKSQKSALLIQLI 238
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ +VF+RT LA L + G +A I G+ SQ+ R AL FK G+ +L+
Sbjct: 239 KQNDWQQVLVFSRTKHGANRLAKSLEDAGIKAAAIHGNKSQTARTKALADFKNGQARVLV 298
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+D+P +DY+HR+GRT RAG +G A+SLV+ E++ I
Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSNEEIKLLNDI 358
Query: 369 EKLIGKKL 376
E+LI + L
Sbjct: 359 ERLINRVL 366
>gi|227550862|ref|ZP_03980911.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257887886|ref|ZP_05667539.1| helicase [Enterococcus faecium 1,141,733]
gi|257893315|ref|ZP_05672968.1| helicase [Enterococcus faecium 1,231,408]
gi|293379275|ref|ZP_06625421.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|431036552|ref|ZP_19492322.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|431752972|ref|ZP_19541651.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|431763081|ref|ZP_19551634.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
gi|227179960|gb|EEI60932.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257823940|gb|EEV50872.1| helicase [Enterococcus faecium 1,141,733]
gi|257829694|gb|EEV56301.1| helicase [Enterococcus faecium 1,231,408]
gi|292642071|gb|EFF60235.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|430563092|gb|ELB02323.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|430612933|gb|ELB49957.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|430622775|gb|ELB59485.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
Length = 503
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 230/379 (60%), Gaps = 13/379 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FKEL L EL+++ E G++ + IQAE IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALVGKDVIGQAQTGTGKTAAFGLPMLE- 61
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+I ++ + V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 62 --KIDPDRHELQGL---VIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAK-YKDCYLVYIL 248
QT LFSATM +K + +K+P ++ +K T D + Q Y V AK Y+ ++ L
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKSPHHVKIKAKEMTADLIDQYY--VRAKEYEKFDIMTRL 233
Query: 249 TEVSASS-TMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+V T+VF RT LA L G RA I G +SQ KR+ L FK+G +IL
Sbjct: 234 FDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDIL 293
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+++
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHV 353
Query: 368 IEKLIGKKLPEF--PAEEE 384
IE L K++ P E+E
Sbjct: 354 IENLTKKRMTTLRPPTEKE 372
>gi|358449520|ref|ZP_09160004.1| DEAD/DEAH box helicase domain-containing protein [Marinobacter
manganoxydans MnI7-9]
gi|357226275|gb|EHJ04756.1| DEAD/DEAH box helicase domain-containing protein [Marinobacter
manganoxydans MnI7-9]
Length = 440
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 220/369 (59%), Gaps = 4/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL ++LV A + G++TPS IQA+AIP L G+D++ AQTG+GKT F LP+LQ
Sbjct: 2 SFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLLQ 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L EN RT A +L+PTRELA Q+ + + + AV+ GGV + Q +
Sbjct: 62 RL---GENPRTGKGPRALILTPTRELAAQVHDSVNLYSKYVPTKAAVVFGGVKINPQMMK 118
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K ++VATPGRLMD L ++ LVLDEADR+L+ F + + +IL ++P
Sbjct: 119 LRKGLDVLVATPGRLMD-LYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILALLPAK 177
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
RQ LFSAT + +++ L L NPV++E A++ ++ + +KQ V K L ++
Sbjct: 178 RQNLLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALLSKLV 237
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
+ S +VFTRT L L G A I G+ SQ R AL FKAGE +L+
Sbjct: 238 RDNSWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLV 297
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TD+A+RGLDI + V+N+++P +DY+HR+GRT RAG +G A+SLV+ E + I
Sbjct: 298 ATDIAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAGI 357
Query: 369 EKLIGKKLP 377
E+LI K+LP
Sbjct: 358 ERLIKKQLP 366
>gi|302508367|ref|XP_003016144.1| ATP-dependent RNA helicase, putative [Arthroderma benhamiae CBS
112371]
gi|291179713|gb|EFE35499.1| ATP-dependent RNA helicase, putative [Arthroderma benhamiae CBS
112371]
Length = 528
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 265/443 (59%), Gaps = 32/443 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F LGL LV + + + K P+ IQ IP ++G+D IG ++TGSGKT AFA PIL
Sbjct: 100 SFSSLGLAPWLVSSLKAMEIKRPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAGPILH 159
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E +A +L+PTRELA+QI EQ +A+ + SL+ ++ GG DM Q +
Sbjct: 160 KWSEDPF------GIYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIG 213
Query: 129 LGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYLVLDEADRLLNDDFEKSLDEI---L 182
L +RPHIV+ATPGRL DH+ ++ L ++ +VLDEADRLL L ++ L
Sbjct: 214 LSQRPHIVIATPGRLADHIKSSGEDTIIGLKRVRMVVLDEADRLLTSGPGSMLPDVETCL 273
Query: 183 NVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPVKI-EAASKYSTVD-TLKQQYRFV 235
+ +P RQT LF+AT+T +V+ L+ RA K P+ + E +++ +T+ TLKQ Y V
Sbjct: 274 SALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKPPIFVTEISTENTTIPPTLKQTYLQV 333
Query: 236 PAKYKDCYL-VYILTEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
P +++ +L V + TE ++S ST++F LL +LR L R + + QS+R+
Sbjct: 334 PLNHREAFLHVLLSTEGNSSKSTIIFCNRTKTADLLERILRRLSHRVTSLHSLLPQSERV 393
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
L++F+A +L+ TDVA+RGLDIPSV +VINYD+P N DYIHRVGRTARAGR G A
Sbjct: 394 ANLSRFRASAARLLVATDVAARGLDIPSVGLVINYDVPRNPDDYIHRVGRTARAGREGEA 453
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
I+LV Q +++ L IE +GK++ + EE V + E++ + +K+ G+ +R
Sbjct: 454 ITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI------ESRIVKGTVLKEVGSTKRE 505
Query: 414 KGGDEDDDIGRQ-FGINKKKLSK 435
G+ D+ GR G +KL K
Sbjct: 506 AMGEIDE--GRDVLGRRVRKLKK 526
>gi|317132682|ref|YP_004091996.1| DEAD/DEAH box helicase [Ethanoligenens harbinense YUAN-3]
gi|315470661|gb|ADU27265.1| DEAD/DEAH box helicase domain protein [Ethanoligenens harbinense
YUAN-3]
Length = 435
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 221/368 (60%), Gaps = 1/368 (0%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L L +++A G++ P+ IQ ++IP+ LE +DL+G AQTG+GKT AFA+PIL
Sbjct: 3 FSQLQLNPSILKALAAAGYEQPTPIQEQSIPYILEKRDLLGTAQTGTGKTAAFAVPILDL 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L A VLSPTRELAIQI E F+ + LR V+ GGV + Q L
Sbjct: 63 LCREHGQSTGSRHIRALVLSPTRELAIQIKESFDQYSRFLHLRNTVIFGGVSQIPQVSRL 122
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
+ I+VATPGRL+D L N + L + Y VLDEADR+L+ F + +++ +P+ R
Sbjct: 123 REGVDILVATPGRLLD-LMNQRHVDLSHVSYFVLDEADRMLDMGFIHDVHKVVEKLPQNR 181
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM + +L LKNP ++ A ST +T++Q+ +V K K LV++L
Sbjct: 182 QTLLFSATMPPDIARLADKLLKNPAQVSVAPVSSTAETVEQKLFYVDKKNKKHLLVHLLK 241
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S +VF+RT + L G + I G+ SQS R AL +FK+ + ++L+
Sbjct: 242 TADMESVLVFSRTKHGANKIVEHLEKAGIPSKAIHGNKSQSARQQALREFKSRKIHVLVA 301
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+A+RG+D+ + VINYD+P + Y+HR+GRT RAG++G+A S ++ E ++ IE
Sbjct: 302 TDIAARGIDVTELSHVINYDLPNEPETYVHRIGRTGRAGQSGMAFSFCDEEEHDYLRTIE 361
Query: 370 KLIGKKLP 377
+LIGK +P
Sbjct: 362 RLIGKHIP 369
>gi|171318169|ref|ZP_02907335.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MEX-5]
gi|171096637|gb|EDT41526.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MEX-5]
Length = 571
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 224/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 86 TFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 145
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A SLR AV+ GGVDM Q
Sbjct: 146 RLLPQASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTSLRSAVVFGGVDMNPQ 204
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 205 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLL 263
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 264 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKHSAVV 323
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L + +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 324 QLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQLERMQALDAFKRGEIE 383
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 384 ALVATDVAARGLDIVELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 443
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 444 ADIEKLIKRPL 454
>gi|225561576|gb|EEH09856.1| ATP-dependent RNA helicase DRS1 [Ajellomyces capsulatus G186AR]
Length = 829
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 215/356 (60%), Gaps = 6/356 (1%)
Query: 5 KEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 64
K K+F+ L ++ +VG+ TP+ IQ + IP AL GKD++G A TGSGKTGAF +
Sbjct: 302 KSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFII 361
Query: 65 PILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQ 124
PIL+ LL R VP +L PTRELA+Q L + + LVGG + +
Sbjct: 362 PILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLRE 418
Query: 125 QTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNV 184
Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLDEADR+L D F L+EIL
Sbjct: 419 QENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFTDELNEILTT 478
Query: 185 IPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQY-RFVPAKYKD-- 241
IP+ RQT LFSATMT V KL R L PV++ +K TV TL Q++ R P + +
Sbjct: 479 IPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVGTLIQEFVRLRPGREEKRL 538
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+ + + +VF R+ + ++ LG + + G MSQ +R+ ++ F+
Sbjct: 539 GYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVTELHGSMSQEQRIKSVESFRD 598
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
G+ + L+ TDVASRGLDI V+ VINY+ P + + Y+HRVGRTARAGR+G A +L
Sbjct: 599 GKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTLA 654
>gi|339324706|ref|YP_004684399.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
gi|338164863|gb|AEI75918.1| ATP-dependent RNA helicase RhlE [Cupriavidus necator N-1]
Length = 532
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/374 (43%), Positives = 223/374 (59%), Gaps = 7/374 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F ELGL D++V A G+ TP+ IQA+AIP L+G DL+ AQTG+GKT F LP+LQ
Sbjct: 2 SFSELGLSDKIVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQ 61
Query: 69 ALLEIAE---NQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
L + A N PA A VL+PTRELA Q+ E G + LR V+ GGV +
Sbjct: 62 MLSDSAARGANGAQRPARLPVRALVLTPTRELAAQVEESVRNYGKYLRLRSMVMFGGVGI 121
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
Q L + IVVATPGRL+DH++ + L ++ LVLDEADR+L+ F + +IL
Sbjct: 122 NPQIEQLKRGVEIVVATPGRLLDHVSQ-RTIDLSQVELLVLDEADRMLDMGFIHDIRKIL 180
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
NV+P RQ LFSAT + ++ L L NP IE A + +T +T+ Q+ V + K
Sbjct: 181 NVLPAKRQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVDQRVYPVDRERKRE 240
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
L +++ + +VFTRT LA L G A+ I G+ SQS R AL++FK+G
Sbjct: 241 LLAHLVRQHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKSG 300
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+L+ TD+A+RG+DI + V+N+D+P +DY+HR+GRT RAG G AISLV E+
Sbjct: 301 TLRLLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEI 360
Query: 363 EWYLQIEKLIGKKL 376
IE+LI +KL
Sbjct: 361 ALLRDIERLIKRKL 374
>gi|333375756|ref|ZP_08467557.1| ATP-dependent RNA helicase RhlE [Kingella kingae ATCC 23330]
gi|332969729|gb|EGK08743.1| ATP-dependent RNA helicase RhlE [Kingella kingae ATCC 23330]
Length = 484
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/380 (42%), Positives = 229/380 (60%), Gaps = 5/380 (1%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
M E + + F +LGL E+V A G++TP+ IQ AIP AL G DL+ AQTG+GKT
Sbjct: 23 MQERRNMTQFSQLGLGQEIVSALSEQGYETPTPIQLAAIPKALAGHDLLAAAQTGTGKTA 82
Query: 61 AFALPILQALLEIAENQRTVPAFFA---CVLSPTRELAIQISEQFEALGSGISLRCAVLV 117
AF LP L+ L A N T PA VL+PTRELA QI + ++ + LR VL
Sbjct: 83 AFMLPSLERLKRYA-NASTSPAMHPMRMLVLTPTRELADQIDQNTKSYIKNLPLRHTVLF 141
Query: 118 GGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKS 177
GGV M +QT L IVVAT GRL+DH+ K +L ++ +VLDEADR+L+ F
Sbjct: 142 GGVSMDKQTADLRAGCEIVVATVGRLLDHVKQ-KNINLNKVEIVVLDEADRMLDMGFVDE 200
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+ +I+ ++P+ RQT LFSAT ++KL + + P IE A++ +T ++Q V A
Sbjct: 201 IRQIMRLLPKSRQTLLFSATFAPDIRKLAQDFMHLPETIEVAAQNTTNANVEQHVIAVDA 260
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
K L ++ +++ +VF +T + +A L G A I G SQ RL L+
Sbjct: 261 HRKKELLERLIVDLNMPQVIVFCKTKQSAEQVARDLLRRGLSANAIHGDKSQQTRLEVLS 320
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
+FK+GE +L+ TDVA+RGLDI + VINY++P ++DY+HR+GRT RAG GVAIS++
Sbjct: 321 QFKSGELRVLVATDVAARGLDIAELPFVINYELPVQAEDYVHRIGRTGRAGAEGVAISMM 380
Query: 358 NQYELEWYLQIEKLIGKKLP 377
++ E + Y I++LIG +LP
Sbjct: 381 DETEQKMYASIQELIGAQLP 400
>gi|218676562|ref|YP_002395381.1| ATP-dependent RNA helicase [Vibrio splendidus LGP32]
gi|218324830|emb|CAV26551.1| ATP-dependent RNA helicase [Vibrio splendidus LGP32]
Length = 423
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 221/372 (59%), Gaps = 2/372 (0%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F +LGL + L+ + + P+ +Q +AIP LEGKD++ AQTG+GKT AF LPI+
Sbjct: 6 KSFNQLGLSEHLLATLSELNFTAPTSVQEQAIPLVLEGKDVLAGAQTGTGKTAAFGLPII 65
Query: 68 QALLEIAENQRTVPAFF-ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
Q L+E +N P A VL PTRELA Q+ + + G ++ V GGV M QT
Sbjct: 66 QRLIETKDNVIPNPKLVRALVLVPTRELAQQVFDNVTSYAKGTDIKVVVAYGGVSMKVQT 125
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L I+VATPGRL+DH+ TK L + LVLDEADR+L+ F + IL+ +
Sbjct: 126 ENLRGGADILVATPGRLIDHMF-TKNIMLSHTEVLVLDEADRMLDMGFMPDIKRILSRMN 184
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+RQT FSAT K+K L +++P +I+ K ST DT+ Q V K L Y
Sbjct: 185 EVRQTLFFSATFDNKIKALAHRMMQSPSEIQVTPKNSTADTVTQMVYPVDKSRKSELLAY 244
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ + +VFT+T T L L+ G +A I+G SQ R AL+ FK+G+
Sbjct: 245 LIGSKNWQQVLVFTKTKQGTDALVKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRA 304
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
LI TDVA+RG+DI ++ V+NYD+P ++DY+HR+GRT RAG +G+AISL++Q E
Sbjct: 305 LIATDVAARGIDIQQLEQVVNYDMPFKAEDYVHRIGRTGRAGNSGLAISLMSQDEAYLLG 364
Query: 367 QIEKLIGKKLPE 378
IE+L+ +LP+
Sbjct: 365 DIERLLDTRLPQ 376
>gi|404379959|ref|ZP_10985006.1| hypothetical protein HMPREF9021_02611 [Simonsiella muelleri ATCC
29453]
gi|404294483|gb|EJZ50145.1| hypothetical protein HMPREF9021_02611 [Simonsiella muelleri ATCC
29453]
Length = 449
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 225/371 (60%), Gaps = 5/371 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +LGL E+ A G++TP+ IQA AIP AL G DL+ AQTG+GKT AF LP L+
Sbjct: 4 FSQLGLGQEITSALAEQGYETPTPIQATAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 63
Query: 70 LLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L A N T PA VL+PTRELA QI + + + LR VL GGV+M +QT
Sbjct: 64 LKRYA-NASTSPAMHPVRMLVLTPTRELADQIDQNTQNYIKNLPLRHTVLFGGVNMDKQT 122
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L IVVAT GRL+DH+ K +L ++ +VLDEADR+L+ F + +I+ ++P
Sbjct: 123 TDLRTGCEIVVATVGRLLDHIKQ-KNINLNKVEIVVLDEADRMLDMGFIDDIRQIMQMLP 181
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R RQT LFSAT ++KL + + +P +E A++ +T ++Q V A K L
Sbjct: 182 RPRQTLLFSATFAPAIRKLAQDFMNSPETVEVAAQNATNANVEQHVIAVDAYRKRELLER 241
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ ++ +VF +T + +A L G A I G SQ RL L++FK+GE +
Sbjct: 242 LIVDLQMPQVIVFCKTKQSADQVARDLVRRGLSANAIHGDKSQQTRLDVLSQFKSGELRV 301
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VINY++PT ++DY+HR+GRT RAG GVAIS+++ E + Y
Sbjct: 302 LVATDVAARGLDIAELPFVINYELPTQAEDYVHRIGRTGRAGADGVAISMMDDNEQKMYF 361
Query: 367 QIEKLIGKKLP 377
I +LIG++LP
Sbjct: 362 SINELIGQELP 372
>gi|158292622|ref|XP_314012.3| AGAP005130-PA [Anopheles gambiae str. PEST]
gi|157017078|gb|EAA09455.3| AGAP005130-PA [Anopheles gambiae str. PEST]
Length = 531
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/416 (39%), Positives = 239/416 (57%), Gaps = 20/416 (4%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K F +LGL + E +G + P+ IQ E IP L+G+D IG A+TGSGKT AFALPIL
Sbjct: 7 KKFSDLGLTYWITRQTEKLGLRRPTPIQVECIPRILQGQDCIGAAKTGSGKTFAFALPIL 66
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q L E A FA VL+PT ELA QI+EQF G ++ R V+ GG D + ++
Sbjct: 67 QKLSE------EPTANFALVLTPTHELAHQIAEQFIVAGQPMNARVCVVTGGTDYLIESQ 120
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L KRPHI+VA PGRL DHLT +S L++LV+DEADR+L F++ L I +P
Sbjct: 121 QLEKRPHIIVAMPGRLADHLTGCNTYSFAALQFLVVDEADRMLCGSFDEDLMVINRFLPA 180
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPV-----KIEAASKYSTVDTLKQQYRFVPAKYKDC 242
RQ FSAT+ K + + P+ + S +TV+TL Q+Y +D
Sbjct: 181 KRQNLFFSATL----KDFLKTSIVFPIADDVFEWSEQSPVATVETLDQRYLLCADYDRDT 236
Query: 243 YLVYILTEVSA----SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNK 298
+V L + +S M+FT + ++L++ L + G + + G + Q +R+ ALNK
Sbjct: 237 VMVEALRKYKEDQEDASIMIFTNSKKDCQILSMSLNSFGFSNVCLHGFLRQRERVAALNK 296
Query: 299 FKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVN 358
FK+ I+I TDVASRGLDI V +V+N+ +P +YIHRVGRTARAGR G+AIS++
Sbjct: 297 FKSKHVRIMIATDVASRGLDIHDVQLVVNHRLPKKPIEYIHRVGRTARAGRAGMAISILR 356
Query: 359 -QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
+LE +IE LI KL E+ ++ V + +V A+ +++ + + R+
Sbjct: 357 FPRDLEALGEIEALINTKLTEYSVDDRLVQRIFMQVKVARAEAEINLDNKDFDERK 412
>gi|170782231|ref|YP_001710564.1| cold-shock DEAD-box RNA helicase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156800|emb|CAQ01964.1| cold-shock DEAD-box RNA helicase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 585
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 236/391 (60%), Gaps = 10/391 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF +LGL D++++A ++VG++TPS IQA IP L G+D++G+AQTG+GKT AFALPIL
Sbjct: 18 TFSDLGLSDQVLKALKDVGYETPSAIQAATIPSLLSGRDVLGVAQTGTGKTAAFALPILS 77
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCAVLVGGVDMMQQTL 127
L ++A Q+T A VL+PTRELA+Q+ E FE SG+ + + GG Q
Sbjct: 78 NL-DVA--QKTPQAL---VLAPTRELALQVCEAFERYASGMRGVHVLPVYGGQGYGVQLS 131
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL + H+VV TPGR+MDHL + L LK+LVLDEAD +L F + ++ IL P+
Sbjct: 132 ALRRGVHVVVGTPGRIMDHL-DKGTLDLSQLKFLVLDEADEMLKMGFAEDVETILADTPK 190
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
+Q LFSATM +++++ L++P +I +K +T Q+Y V K L I
Sbjct: 191 SKQIALFSATMPAQIRRISGKYLQDPEEITVKNKTTTSANTTQRYLMVSYPQKVDALTRI 250
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + +VF RT + T LA LR G A ISG ++Q++R + + K G+ +IL
Sbjct: 251 LETENFEGMIVFVRTKNETETLAEKLRARGYAAAAISGDVAQAQRERTVEQLKNGKLDIL 310
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLD+ + V+NYDIP +++ Y+HR+GRT RAGR+G AIS V E
Sbjct: 311 VATDVAARGLDVDRISHVVNYDIPIDTESYVHRIGRTGRAGRSGAAISFVTPRERRLLTA 370
Query: 368 IEKLIGKKLPE--FPAEEEEVLLLLERVTEA 396
IEK + L E P+ E+ + L R +A
Sbjct: 371 IEKATRQPLTEMRMPSAEDVNVTRLSRFDDA 401
>gi|380696525|ref|ZP_09861384.1| ATP-dependent RNA helicase [Bacteroides faecis MAJ27]
Length = 374
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 223/369 (60%), Gaps = 4/369 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFKEL + + +++A E G+ P+ IQ +AIP AL +D++G AQTG+GKT +FA+PI+Q
Sbjct: 2 TFKELNITEPILKAVEEKGYTVPTPIQEKAIPVALVKRDILGCAQTGTGKTASFAIPIIQ 61
Query: 69 AL-LEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L L E +R A +L+PTRELA+QISE + +R V+ GGV+ Q
Sbjct: 62 HLHLNKGEGKRL--GIKALILTPTRELALQISECIDDYSKYTRIRHGVIFGGVNQRPQVD 119
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
L K I+VATPGRL+D L N L ++Y VLDEADR+L+ F + IL +P+
Sbjct: 120 MLHKGIDILVATPGRLLD-LMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKLPK 178
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
+QT FSATM + L + LKNPVKI K STVD++KQ FV K K L+ I
Sbjct: 179 EKQTLFFSATMPDTIIALTNSLLKNPVKIYVTPKSSTVDSIKQLVYFVEKKEKSQLLISI 238
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L + S ++F+RT + +L G + I G+ SQ+ R AL FK+G+ ++
Sbjct: 239 LQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVM 298
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TD+ASRG+DI + +VINYD+P + Y+HR+GRT RAG G A++ +Q E +
Sbjct: 299 VATDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNEGTALTFCSQEERKLIND 358
Query: 368 IEKLIGKKL 376
I+KL GKKL
Sbjct: 359 IQKLTGKKL 367
>gi|218132094|ref|ZP_03460898.1| hypothetical protein BACEGG_03721 [Bacteroides eggerthii DSM 20697]
gi|217985744|gb|EEC52085.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 392
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 229/372 (61%), Gaps = 12/372 (3%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TFK+L + + +++A E G+ P+ IQA+AIP L GKD++G AQTG+GKT AFA+PI+Q
Sbjct: 22 TFKDLNITESILKAIEEKGYVNPTPIQAKAIPALLVGKDILGCAQTGTGKTAAFAIPIIQ 81
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
++ ++ + A +L+PTRELA+QISE + +R V+ GGV+ Q
Sbjct: 82 ---QLQADKSLNNSIKALILTPTRELALQISECIDDYAKYTQVRHGVIFGGVNQRTQVNM 138
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K I+VATPGRL+D L N L +++ VLDEADR+L+ F + +L +P+
Sbjct: 139 LHKGVDILVATPGRLLD-LMNQGYVRLNNIQHFVLDEADRMLDMGFIHDIKRLLPKLPKE 197
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
+QT LFSATM + L + LK PVKI K STVD ++Q FV K K L+ IL
Sbjct: 198 KQTLLFSATMPDTIISLTNSLLKQPVKISITPKSSTVDAIEQTVYFVEKKEKSKLLISIL 257
Query: 249 TEVSASSTMVFTRT-CDATRLLALMLRNLGQRAI---PISGHMSQSKRLGALNKFKAGEC 304
+ S +VF+RT +A R++ R LG+ I I G+ SQ+ R AL FK+G+
Sbjct: 258 HKTQGQSVLVFSRTKHNADRIV----RVLGKAGIGSQAIHGNKSQNARQSALENFKSGKI 313
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
++I TD+A+RG+DI + +VINYD+P + Y+HR+GRT RAG +G A+S +Q E +
Sbjct: 314 RVMIATDIAARGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNSGTALSFCSQEERKL 373
Query: 365 YLQIEKLIGKKL 376
I+KL GKKL
Sbjct: 374 VNDIQKLTGKKL 385
>gi|134296504|ref|YP_001120239.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
vietnamiensis G4]
gi|134139661|gb|ABO55404.1| DEAD/DEAH box helicase domain protein [Burkholderia vietnamiensis
G4]
Length = 512
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 223/371 (60%), Gaps = 5/371 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF + GL ++++A G+ TP+ IQA+AIP L G+D++G AQTG+GKT +F+LPI+Q
Sbjct: 34 TFDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 93
Query: 69 ALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 125
LL A + PA A +L+PTRELA Q++ A +LR AV+ GGVDM Q
Sbjct: 94 RLLPHASTSAS-PARHPVRALILTPTRELADQVAANVHAYAKHTALRSAVVFGGVDMNPQ 152
Query: 126 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L + I++ATPGRL+DH+ K +LG ++ LVLDEADR+L+ F L ILN++
Sbjct: 153 MAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQMLVLDEADRMLDMGFLPDLQRILNLL 211
Query: 186 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
P+ RQT LFSAT + ++KKL L+NP IE A ST + Q V K +V
Sbjct: 212 PKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQAAVV 271
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+L +VF + LA L G A I G SQ +R+ AL+ FK GE
Sbjct: 272 QLLRGRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQALDAFKRGEIE 331
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
L+ TDVA+RGLDI + VIN+D+P N++DY+HR+GRT RAG TG A+SL + E +
Sbjct: 332 ALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLCSPNERKQL 391
Query: 366 LQIEKLIGKKL 376
IEKLI + L
Sbjct: 392 ADIEKLIKRPL 402
>gi|427400760|ref|ZP_18891998.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
gi|425720273|gb|EKU83196.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
Length = 523
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/366 (41%), Positives = 222/366 (60%), Gaps = 5/366 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F + GL E+ A + G+ P+ IQA+AIP L+G+D++G AQTG+GKT +F+LPILQ
Sbjct: 42 FADFGLAPEIQRALSDQGYVHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTASFSLPILQL 101
Query: 70 LLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
L+ A N PA A VL PTRELA+Q+++ +A LR V+ GG+DM QT
Sbjct: 102 LMPHA-NASMSPARHPVRALVLVPTRELAVQVADNVKAYARHTPLRATVVFGGMDMKPQT 160
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L + IV+ATPGRL+DH+ K SLG ++ LV+DEADR+L+ F L I+N++P
Sbjct: 161 EILRRGVEIVIATPGRLLDHIEQ-KNVSLGQVQMLVMDEADRMLDMGFLPDLQRIINLLP 219
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQ +FSAT + ++KKL L NP+ IE A +T + + Q V + K + +
Sbjct: 220 KQRQNLMFSATFSPEIKKLANTFLNNPLTIEVARSNATAEKVTQIVYKVDEEQKRDVVEH 279
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
++ ++F+ T L+ L G +A I G +Q +R+ AL+ FK G +
Sbjct: 280 LIRSRDMKQVIIFSNTKIGASRLSSHLEKRGVKASAIHGDKTQQERMAALDAFKNGSVEV 339
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDI + VINYD+P N++DY+HR+GRT RAG +G A+S+ + +
Sbjct: 340 LVATDVAARGLDISDLPAVINYDLPYNAEDYVHRIGRTGRAGASGDALSVYSDKDERLLA 399
Query: 367 QIEKLI 372
IEKLI
Sbjct: 400 DIEKLI 405
>gi|325568403|ref|ZP_08144770.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|420263005|ref|ZP_14765645.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
gi|325158172|gb|EGC70325.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|394769969|gb|EJF49787.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
Length = 508
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 227/383 (59%), Gaps = 16/383 (4%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
FK+L L +EL+ + E G++ + IQ IP AL GKD+IG AQTG+GKT AF LP+L+
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
+ + A +Q V++PTRELAIQ E+ LG +R + GG D+ +Q L
Sbjct: 63 I-DPANHQ-----LQGLVIAPTRELAIQTQEELYRLGKDKKIRVQAVYGGADIGRQIRQL 116
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
RPHIVV TPGR++DH+ N LGT++ LVLDEAD +LN F + +++I++ +P +R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVETLVLDEADEMLNMGFLEDIEKIISQVPDVR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LFSATM +K + +K P ++ +K T D + Q Y + KD ++T
Sbjct: 176 QTLLFSATMPPAIKNIGVKFMKEPEHVQIKAKEMTADLIDQYY----VRSKDYEKFDVMT 231
Query: 250 EV----SASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
+ S T+VF RT LA L G +A I G +SQ KR+ L FK+G+ +
Sbjct: 232 RLLDVQSPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKSGQLD 291
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDI V V NYDIP + + Y+HR+GRT RAG+ G++++ V E+ +
Sbjct: 292 ILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMSYL 351
Query: 366 LQIEKLIGKKL-PEFPAEEEEVL 387
IE L K++ P P E+E
Sbjct: 352 HVIENLTKKRMTPMRPPTEKEAF 374
>gi|358372222|dbj|GAA88826.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 522
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 255/445 (57%), Gaps = 35/445 (7%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F L + L+ + + + P+ IQ IP L G+D IG ++TGSGKT AF++P+LQ
Sbjct: 93 SFASLKVAPWLIGSLTTMAVRKPTAIQKACIPEILSGRDCIGGSRTGSGKTIAFSVPMLQ 152
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E F VL+PTRELA+QI EQ +A+ + S++ ++ GG DM Q LA
Sbjct: 153 KWAEDPF------GIFGLVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRPQALA 206
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS----LGTLKYLVLDEADRLLNDDFEKSLDEI--- 181
L +RPH+V+ATPGRL DH+ NT G L ++ +VLDEADRLL+ L ++
Sbjct: 207 LAQRPHVVIATPGRLADHI-NTSGTDTIRGLKRVRMVVLDEADRLLSPGHGSMLPDVETC 265
Query: 182 LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPV---KIEAASKYSTVDTLKQQYR 233
L+ +P RQT LF+AT+T +V+ L+ R K P+ +I + S TLKQ Y
Sbjct: 266 LSALPPSSERQTLLFTATLTPEVRALKSMPRPASKPPIFVTEISTENNASIPPTLKQTYL 325
Query: 234 FVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 291
VP +++ +L V + TE +AS ++F LL MLR L R + + QS+
Sbjct: 326 KVPMTHREAFLHVLLSTEANASKPAIIFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSE 385
Query: 292 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 351
R L +F+A +L+ TDVASRGLDIPSV++V+N+D+P N DY+HRVGRTARAGR G
Sbjct: 386 RNANLARFRASAARLLVATDVASRGLDIPSVELVVNFDVPRNPDDYVHRVGRTARAGRKG 445
Query: 352 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+++LV Q ++ L IE+ +G+++ E+ E V E + + +K+ G +
Sbjct: 446 ESVTLVGQRDVSLVLAIEERVGRQMEEWSEEGVSV--------EGRVVRTGVLKEVGEAK 497
Query: 412 RRKGGDEDDDIGRQ-FGINKKKLSK 435
R G+ ++ GR G + KL K
Sbjct: 498 REANGEIEE--GRDVLGRKRNKLKK 520
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,313,749,846
Number of Sequences: 23463169
Number of extensions: 256929036
Number of successful extensions: 879598
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 34821
Number of HSP's successfully gapped in prelim test: 6178
Number of HSP's that attempted gapping in prelim test: 751723
Number of HSP's gapped (non-prelim): 52158
length of query: 437
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 291
effective length of database: 8,933,572,693
effective search space: 2599669653663
effective search space used: 2599669653663
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)