BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013727
(437 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana
GN=RH10 PE=2 SV=2
Length = 456
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/444 (77%), Positives = 395/444 (88%), Gaps = 9/444 (2%)
Query: 1 MAEEKEV-KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKT 59
M EE EV KTF ELG+R+ELV+ACE +GWK PSKIQAEA+P ALEGKD+IGLAQTGSGKT
Sbjct: 1 MEEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKT 60
Query: 60 GAFALPILQALLEIA------ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRC 113
GAFA+PILQALLE + +R PAFFACVLSPTRELAIQI+EQFEALG+ ISLRC
Sbjct: 61 GAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRC 120
Query: 114 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 173
AVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKGFSL +LKYLVLDEADRLLN+D
Sbjct: 121 AVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNED 180
Query: 174 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYR 233
FEKSL++IL IP R+T+LFSATMTKKV+KLQRACL+NPVKIEAASKYSTVDTLKQQYR
Sbjct: 181 FEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYR 240
Query: 234 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
FV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+LR+LG RAIPISG M+QSKRL
Sbjct: 241 FVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
GALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+GV
Sbjct: 301 GALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVG 360
Query: 354 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLERV EAK++S M +K+SG ++RR
Sbjct: 361 ISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR 420
Query: 414 KGGDEDDDIGRQFGINKKKLSKRK 437
G++D++ R G NK + +K +
Sbjct: 421 --GEDDEESERFLGGNKDRGNKER 442
>sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp.
japonica GN=Os03g0669000 PE=2 SV=1
Length = 472
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/431 (66%), Positives = 350/431 (81%), Gaps = 6/431 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELG+ ELV AC+ +GWK P++IQAEAIPHALEG+DLIGL QTGSGKTGAFALPI+Q
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
ALL+ + Q A FACVLSPTRELA QI +QFEALGS I L C VLVGGVD +QQ ++
Sbjct: 102 ALLKQDKPQ----ALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVS 157
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L KRPHIVV TPGRL+DHLT+TKGFSL LKYLVLDEAD+LLN +F+K+LD+ILNVIP+
Sbjct: 158 LAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKE 217
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R+T+LFSATMT KV KLQRACL+NPVK+E ASKYSTVDTL+Q++ FVPA YKDC+LV++L
Sbjct: 218 RRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVL 277
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E+ S M+F RTC++TRLLAL LRNL +AI ISG MSQ KRLGALN+FK +CNILI
Sbjct: 278 NELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILI 337
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
CTDVASRGLDI VD+VINYDIP NSKDY+HRVGRTARAG TG A+SLVNQYE W+ I
Sbjct: 338 CTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMI 397
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN--KRRRKGGDEDDDIGRQF 426
EKL+G ++P+ + E+++L ER++++KRI+ T+K+ G K+RRK D++++ R
Sbjct: 398 EKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEERNA 457
Query: 427 GINKKKLSKRK 437
+++K S K
Sbjct: 458 PVSRKSKSFNK 468
>sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus GN=Ddx47
PE=2 SV=2
Length = 455
Score = 577 bits (1487), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/442 (63%), Positives = 352/442 (79%), Gaps = 12/442 (2%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
AEE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGA
Sbjct: 18 AEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 77
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 78 FALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 131
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+I
Sbjct: 132 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 191
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
L VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 192 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 251
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 252 TYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKA 311
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY+
Sbjct: 312 KARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 371
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDE 418
+E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +++ G K++RK GD+
Sbjct: 372 VELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHGEKKKRKREDAGDD 431
Query: 419 DDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 432 DDKEGAIGVRNKVAGGKMKKRK 453
>sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47
PE=2 SV=1
Length = 457
Score = 570 bits (1469), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/441 (62%), Positives = 349/441 (79%), Gaps = 12/441 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E +E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAF
Sbjct: 21 EVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 80
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++CAV+VGG+D
Sbjct: 81 ALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDS 134
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 135 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 194
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 195 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 254
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 255 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 314
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 315 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 374
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 420
E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +++ G K++R D ++D
Sbjct: 375 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDVGDND 434
Query: 421 DIGRQFGINKK----KLSKRK 437
D G+ K K+ KRK
Sbjct: 435 DTEGAIGVRNKVAGGKMKKRK 455
>sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47
PE=1 SV=1
Length = 455
Score = 568 bits (1464), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/443 (62%), Positives = 349/443 (78%), Gaps = 12/443 (2%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+ EE+E KTFK+LG+ D L EAC+ +GW P+KIQ EAIP AL+G+D+IGLA+TGSGKTG
Sbjct: 17 IVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTG 76
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AFALPIL ALLE + FA VL+PTRELA QISEQFEALGS I ++ AV+VGG+
Sbjct: 77 AFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGI 130
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+
Sbjct: 131 DSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 190
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+K
Sbjct: 191 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFK
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
A +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGD 417
++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R GD
Sbjct: 371 DVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGD 430
Query: 418 EDDD---IGRQFGINKKKLSKRK 437
DD IG + + K+ KRK
Sbjct: 431 NDDTEGAIGVRNKVAGGKMKKRK 453
>sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis
elegans GN=T26G10.1 PE=3 SV=1
Length = 489
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/425 (59%), Positives = 326/425 (76%), Gaps = 14/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+F ELG+ L +AC+ +GW PSKIQ A+PHAL+GKD+IGLA+TGSGKTGAFA+P+L
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL+ + AFF VL+PTRELA QI +QFEALGSGI L AV+VGGVDM Q +
Sbjct: 104 QSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAM 157
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++DEADR+LN DFE LD+IL VIPR
Sbjct: 158 ALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPR 217
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+TYLFSATMTKKV KL+RA L++P ++ +S+Y TVD LKQ Y FVP KYK+ YLVY+
Sbjct: 218 ERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYL 277
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + +S +VF TC T +A+MLR LG +A+P+ G MSQ KRLG+LNKFK+ IL
Sbjct: 278 LNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREIL 337
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRTARAGR+G+AI++V QY++E Y +
Sbjct: 338 VCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQK 397
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD------SGNKRRRKG--GDED 419
IE +GKKL E+ E EV++L+ER EA +++ +K+ SG KRR+ GD +
Sbjct: 398 IEANLGKKLDEYKCVENEVMVLVERTQEATENARIEMKEMDEKKKSGKKRRQNDDFGDTE 457
Query: 420 DDIGR 424
+ GR
Sbjct: 458 ESGGR 462
>sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rrp3
PE=3 SV=1
Length = 472
Score = 513 bits (1321), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/425 (58%), Positives = 332/425 (78%), Gaps = 15/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D+L EACE +G+K P+ IQAE+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E + +FF +L+PTRELA QIS+ FE+LGS I++RCAV+VGG+DM+ Q++
Sbjct: 112 QALMENPQ------SFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSI 165
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 166 ALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPR 225
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P K+KD YLVY
Sbjct: 226 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVY 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E ST++FTRT T+ ++ +LR+LG AIP+ G +SQS RLGAL KF++ +I
Sbjct: 286 LLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDI 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRTARAG++GVAIS V QY++E +L
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 405
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQF 426
+IE +GKKL E+ E++EV++L ERV EA+R + M +K+ KR K ++F
Sbjct: 406 RIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIMEMKNFDEKRGTK--------AKKF 457
Query: 427 GINKK 431
G K+
Sbjct: 458 GKGKR 462
>sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3
PE=3 SV=1
Length = 472
Score = 510 bits (1314), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/425 (58%), Positives = 331/425 (77%), Gaps = 15/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D+L EACE +G+K P+ IQAE+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E ++ FF +L+PTRELA QIS+ FE+LGS I++RCAV+VGG+DM+ Q++
Sbjct: 112 QALMEKPQS------FFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSI 165
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 166 ALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPR 225
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P K+KD YLVY
Sbjct: 226 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVY 285
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E S ++FTRT T+ ++ +LR+LG AIP+ G +SQS RLGAL KF++ +I
Sbjct: 286 LLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDI 345
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRTARAG++GVAIS V QY++E +L
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 405
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQF 426
+IE +GKKL E+ E++EV++L ERV EA+R + + +K+ KR K ++F
Sbjct: 406 RIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIVEMKNFDEKRGTK--------AKKF 457
Query: 427 GINKK 431
G K+
Sbjct: 458 GKGKR 462
>sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=RRP3 PE=3 SV=1
Length = 485
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/415 (60%), Positives = 326/415 (78%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+FK+LG+ D L EACE +G+K+P+ IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 54 EEAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAF 113
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL+ ++ F +L+PTRELA QISE FEALGS IS+RCAV+VGG+DM
Sbjct: 114 ALPILQALMNKPQS------LFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDM 167
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL
Sbjct: 168 VSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKIL 227
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q Y F+P KYKD
Sbjct: 228 KVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKD 287
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+ G +SQS RLGAL+KF++
Sbjct: 288 IYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPLHGQLSQSSRLGALSKFRS 347
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGRTARAG++G A S+V QY+
Sbjct: 348 RSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYD 407
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E +L+IE +GKKL E+ E+EEV++L +RV EA+R + +KD KR +G
Sbjct: 408 IEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITEMKDLHEKRGSRGA 462
>sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rrp3 PE=3 SV=1
Length = 465
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/429 (56%), Positives = 323/429 (75%), Gaps = 14/429 (3%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K+FKELG+ D+L EACEN+G+K P+ IQ++AIP ALEG+D+IGLA+TGSGKT AF
Sbjct: 41 EPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAF 100
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALP+LQAL+E + F VL+PTRELA QIS+ FE LGS I +RCAV+VGG+DM
Sbjct: 101 ALPMLQALMEAPQT------LFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDM 154
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYL +DEADRLL+ DF +SLD+I+
Sbjct: 155 VAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKII 214
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
++PR R TYLFSATM+ KV+ LQRA L NPV++ +SKY TV TL+ Y +P K+K+
Sbjct: 215 RILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKNL 274
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YLVY+L E + S ++FT T T+ +A MLR LG AIP+ G +SQS RLGAL KF++
Sbjct: 275 YLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSR 334
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVA+RGLDIPSVD+V N+D+P +SK YIHRVGRTARAG++GVAIS V QY++
Sbjct: 335 SRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYDV 394
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDI 422
E +L+IE + KKLPE+ E++EV+++ ERV EA R + + +K K+ +
Sbjct: 395 EVWLRIEHALSKKLPEYQVEKDEVMVMSERVAEASRQATIEMKSFDEKKGAR-------- 446
Query: 423 GRQFGINKK 431
G++FG K+
Sbjct: 447 GKKFGKGKR 455
>sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRP3 PE=3
SV=1
Length = 486
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/419 (59%), Positives = 325/419 (77%), Gaps = 11/419 (2%)
Query: 2 AEEKEV----KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSG 57
AEE V KTFK+LG+ D L EACE + +K P+ IQ ++IP AL+G+D+IGLA+TGSG
Sbjct: 50 AEETAVDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSG 109
Query: 58 KTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLV 117
KT AFALP+LQALL+ + F VL+PTRELA QI + FEALGS ISLRCAV+V
Sbjct: 110 KTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIV 163
Query: 118 GGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKS 177
GG+DM+ Q +ALGK+PHIVVATPGRL+DHL TKGFSL TLKYL++DEADRLL+ DF S
Sbjct: 164 GGLDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPS 223
Query: 178 LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVP 236
+D+IL +PR R+TYLFSAT++ K++ LQRA L++PVK+ +S KY TV TL Q Y F+P
Sbjct: 224 IDKILKFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQNYLFIP 283
Query: 237 AKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGAL 296
KD +L+Y++ E + ST+VFTRT T+ ++++LR LG AIP+ G +SQS RLGAL
Sbjct: 284 HPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGAL 343
Query: 297 NKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISL 356
NKF++G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++GVAISL
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISL 403
Query: 357 VNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
V QY+LE YL+IE +GKKL E+P E+EEV+ RV EA+RI+++ +K +R +KG
Sbjct: 404 VTQYDLEIYLRIEAALGKKLAEYPTEKEEVMAFQSRVEEAQRIARIEMKSFTEERGKKG 462
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 327/415 (78%), Gaps = 7/415 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
A ++ K+FKELGL ++L EAC+++G+K P+ IQAEAIP AL+G+DLIGLA+TGSGKT A
Sbjct: 46 APKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAA 105
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQAL++ + FF VL+PTRELA QIS+ FE LGS IS+R VLVGG+D
Sbjct: 106 FALPILQALMDKPSS------FFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMD 159
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 160 MVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKI 219
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 240
L V+PR R+TYLFSATM+ KV+ LQRA L+NP+++ ++SK+ TV TL+Q Y F+P K+K
Sbjct: 220 LKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYIFIPHKHK 279
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLVY+L E S ++F RT T+ L+ LR LG AIP+ G +SQS RLGAL KF+
Sbjct: 280 DLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALGKFR 339
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
+ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK +IHR+GRTARAG++GVAIS QY
Sbjct: 340 SRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAISFATQY 399
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++E +L+IE +GKKLPE+PAE++EV++L ERV+EA+R + + +K+ K+ +G
Sbjct: 400 DVEAWLRIEGALGKKLPEYPAEKDEVMVLAERVSEAQRSAILEMKNYDEKKGSRG 454
>sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rrp3 PE=3 SV=1
Length = 473
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/405 (60%), Positives = 322/405 (79%), Gaps = 7/405 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D+L EAC +G+K P+ IQAE+IP AL+ +DLIGLA+TGSGKT AFALPIL
Sbjct: 53 KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPIL 112
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL++ + +FF VL+PTRELA QIS+ FEALGS I++RCAV+VGG+DM+ Q++
Sbjct: 113 QALMDKPQ------SFFGLVLAPTRELAFQISQSFEALGSTINVRCAVIVGGMDMVSQSI 166
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DEADRLL+ DF LD+IL ++PR
Sbjct: 167 ALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKILPR 226
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q YRF+P K+KD YLVY
Sbjct: 227 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYRFIPHKHKDIYLVY 286
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E S ++FTRT T+ ++ +LR LG AIP+ G +SQS RLGAL KF++ +I
Sbjct: 287 LLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIPLHGQLSQSSRLGALGKFRSRSRDI 346
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRTARAG++GVAIS V QY++E +L
Sbjct: 347 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 406
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKR 411
+IE +GKKL E+ E++EV++L ERV EA+R + M +K+ K+
Sbjct: 407 RIEGALGKKLDEYDLEKDEVMVLAERVGEAQRQAIMEMKNFDEKK 451
>sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRP3 PE=3 SV=1
Length = 480
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/427 (58%), Positives = 324/427 (75%), Gaps = 11/427 (2%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E++ KTFK+LG+ D + E CE + + P+ IQA++IP+ALEG+D+IGLAQTGSGKT AFA
Sbjct: 60 EEQTKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFA 119
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+P+LQ+L E + + VL+PTRELA QISE FEALGS + LR AV+VGG++MM
Sbjct: 120 IPVLQSLYENPQ------PLYCVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNMM 173
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q +AL K+PH++VATPGRL+DHL NTKGFSL TLK+LV+DEADRLL+ +F SLD+IL
Sbjct: 174 TQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMDEADRLLDMEFGPSLDKILK 233
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIPR R TYLFSATMT KV+KLQRA L +PV++ ++KY T D L Q F P K+KD +
Sbjct: 234 VIPRQRNTYLFSATMTSKVEKLQRASLVDPVRVAVSTKYQTADNLLQYMVFCPFKHKDTH 293
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
LVY+++E + +S ++F RT T+ ++L+LRNLG AIP+ G +SQ+ RLGALNKFK+G
Sbjct: 294 LVYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAIPLHGDLSQTARLGALNKFKSGS 353
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVASRGLDIP+VD+VINYDIP++SK YIHRVGRTARAGR G +++LV+QY+LE
Sbjct: 354 RNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRTARAGRAGKSVALVSQYDLE 413
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR--ISQMTIKDSGNKRR---RKGGDE 418
YL+IE +GKKL +P E E V+L ERV EA R I +M +D KR +K +
Sbjct: 414 LYLRIEGALGKKLDSYPLESEAVMLFSERVAEASRAAIQEMKGEDGTKKRSKFDKKRRRD 473
Query: 419 DDDIGRQ 425
+ DIG Q
Sbjct: 474 EMDIGEQ 480
>sp|Q54VT4|DDX47_DICDI Probable ATP-dependent RNA helicase ddx47 OS=Dictyostelium
discoideum GN=ddx47 PE=3 SV=1
Length = 546
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/416 (57%), Positives = 313/416 (75%), Gaps = 8/416 (1%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF+ LG+ ++++AC +G+ P +IQ E+IP AL+G+D+IGLAQTGSGKT AF +P+LQ
Sbjct: 120 TFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQ 179
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
LLE + F L+PTRELA QI++QF A+GS I ++ VLVGG+D M Q+LA
Sbjct: 180 KLLEAPQ------GLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLA 233
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM 188
L K+PH+VV +PGR++ HL +TKGF+L ++KY ++DEADRL + DFE+ ++ IL VIP+
Sbjct: 234 LAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVNNILKVIPKE 293
Query: 189 RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL 248
R TYLFSATMT KV KLQRA L NPVK++ ASKY TVDTL QQY FVP KYKDCYL YIL
Sbjct: 294 RNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQTVDTLLQQYLFVPFKYKDCYLAYIL 353
Query: 249 TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILI 308
E++ + T++FT TC ++ +A+MLRNLG AIPI+G M Q KRL +LNKFK G +IL+
Sbjct: 354 NELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILV 413
Query: 309 CTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQI 368
TDVA+RGLDIPSVD+VINYD+PTNSK+Y+HRVGRTARAG +G AI++V QY++E Y +I
Sbjct: 414 ATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVTQYDVEMYQRI 473
Query: 369 EKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG--NKRRRKGGDEDDDI 422
E ++ KKL FP +EE VL+ LERV EA RI+ +KD + R GD + I
Sbjct: 474 EFVLKKKLDSFPCQEETVLIFLERVQEAHRIATNELKDKNYSSSSDRHSGDSEGSI 529
>sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rrp3 PE=3 SV=1
Length = 465
Score = 503 bits (1296), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/408 (60%), Positives = 314/408 (76%), Gaps = 6/408 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELG+ DEL EACE +G+KTP+ IQ EAIP L +D+IGLAQTGSGKT AFALP++
Sbjct: 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q L FFA VL+PTRELA QISEQFEA+G I +R V+VGG+DM+ Q +
Sbjct: 106 QELWN------NPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAV 159
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL K+PH++V TPGRLMDHL NTKGFSL LKYL++DEADRLL+ DF +D+IL +IP
Sbjct: 160 ALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPH 219
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+T LFSATMT KV+KLQRA L PV++ +SK+STVDTL Q+Y F P K+KD YLVY+
Sbjct: 220 ERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYL 279
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
+ E++ +S ++F RT + T+ LA++LR LG AIP+ G +SQS RLGALNKFK+G + L
Sbjct: 280 VNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTL 339
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDIP VD+VINYDIPT+SK YIHRVGRTARAGR G +I+LV QY+LE +L+
Sbjct: 340 VATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLR 399
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
IE IGKK+ E+ ++E V LL ERV EA+R + + +K+ ++R+ KG
Sbjct: 400 IEATIGKKMQEYEIDKEGVFLLSERVGEAQREAIIQMKEIHDRRKSKG 447
>sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain
RS) GN=RRP3 PE=3 SV=1
Length = 474
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/415 (58%), Positives = 323/415 (77%), Gaps = 7/415 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E K+FK+LG+ D L EAC+++G+K P++IQAE+IP AL+G+DLIGLA+TGSGKT AF
Sbjct: 43 EATTTKSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAF 102
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQAL++ + + F VL+PTRELA QIS+QFEALGS IS+RCAV+VGG+DM
Sbjct: 103 ALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDM 156
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL
Sbjct: 157 VSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKIL 216
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKD 241
V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY TV TL Q +P K+KD
Sbjct: 217 KVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQNCLIIPHKHKD 276
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E S ++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL KF++
Sbjct: 277 IYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSARLGALGKFRS 336
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGRTARAG++G A SLV QY+
Sbjct: 337 RSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLVTQYD 396
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+E + +IE +GK+L E+ E+EEV++L +RV EA+R + +K+ R +KG
Sbjct: 397 VEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITEMKELHENRGKKGA 451
>sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain
B05.10) GN=rrp3 PE=3 SV=1
Length = 486
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/410 (59%), Positives = 321/410 (78%), Gaps = 7/410 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D L EAC+ +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 60 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 119
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + F VL+PTRELA QIS+QFEALGS I ++CAV+VGG+DM+ Q++
Sbjct: 120 QALLDKPQ------PLFGLVLAPTRELAYQISQQFEALGSVIRVKCAVIVGGMDMVPQSI 173
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 174 ALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLPR 233
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY TV TL Q Y F+P +KD YL+Y
Sbjct: 234 ERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLIHKDTYLIY 293
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + S ++FTRT + T+ +A++LR LG AIP+ G +SQS RLGALNKF+AG I
Sbjct: 294 LLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREI 353
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++G AIS+V QY+LE ++
Sbjct: 354 LVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHRVGRTARAGKSGHAISVVTQYDLEIFM 413
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+IE +GKK E+P ++EV++ RV EA+R ++ +K+ R +KG
Sbjct: 414 RIEAALGKKQVEYPTVKDEVMVFKPRVEEAQRHARNEMKNLHEDRGKKGA 463
>sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRP3 PE=3 SV=1
Length = 551
Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/423 (58%), Positives = 318/423 (75%), Gaps = 15/423 (3%)
Query: 1 MAEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 60
+A++ + F +LG+ ++VEAC N+G+K P+ IQ +AIP AL+ +D+IGLAQTGSGKT
Sbjct: 97 IADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTA 156
Query: 61 AFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGV 120
AF +PILQAL + + FFACVL+PTRELA QIS+Q EALGS I +R A +VGG+
Sbjct: 157 AFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGM 210
Query: 121 DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDE 180
DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DEADRLL+ DF +D+
Sbjct: 211 DMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDK 270
Query: 181 ILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYK 240
+L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV TLKQ Y F+P +K
Sbjct: 271 LLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYMFMPFAHK 330
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G +SQ RLGALNKFK
Sbjct: 331 DTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFK 390
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTARAGR+G +++LV QY
Sbjct: 391 TGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQY 450
Query: 361 ELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMTIKDSG-------NKR 411
++E +IE +IG K+ EFP ++E V+LL ERV EA R + +KD G KR
Sbjct: 451 DVELLQRIEAVIGLKMTEFPGGNDKEAVMLLSERVAEAHRAAVRELKDKGVGSAGGSGKR 510
Query: 412 RRK 414
+RK
Sbjct: 511 KRK 513
>sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRP3 PE=3 SV=1
Length = 484
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/405 (61%), Positives = 312/405 (77%), Gaps = 6/405 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KTF +LG+ EL AC ++G+K PS IQAEAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 33 EASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAF 92
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+LPILQ L E + FFA VL+PTRELA QIS+Q +LGSGI +R AVLVGG+DM
Sbjct: 93 SLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDM 146
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q++AL KRPHI+VATPGRLMDHL NTKGFSL +LKYLV+DEADRLL+ DF +D+IL
Sbjct: 147 MSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKIL 206
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYSTV TL Q Y +P K KD
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYSTVSTLLQHYLLLPLKNKDA 266
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+Y+ E+S+SS M+FTRT ++ L+++LR LG AIP+ G M+QS RL +LNKFK+G
Sbjct: 267 YLLYLANELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSG 326
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRTARAGR+G +I+LV QY++
Sbjct: 327 GRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDV 386
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
E +IE IGKK+ F ++E V LL + V +A R + + +++S
Sbjct: 387 EILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEMRES 431
>sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRP3 PE=3 SV=1
Length = 484
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/405 (61%), Positives = 312/405 (77%), Gaps = 6/405 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E KTF +LG+ EL AC ++G+K PS IQAEAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 33 EASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAF 92
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
+LPILQ L E + FFA VL+PTRELA QIS+Q +LGSGI +R AVLVGG+DM
Sbjct: 93 SLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDM 146
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q++AL KRPHI+VATPGRLMDHL NTKGFSL +LKYLV+DEADRLL+ DF +D+IL
Sbjct: 147 MSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKIL 206
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYSTV TL Q Y +P K KD
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYSTVSTLLQHYLLLPLKNKDA 266
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+Y+ E+S+SS M+FTRT ++ L+++LR LG AIP+ G M+QS RL +LNKFK+G
Sbjct: 267 YLLYLANELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSG 326
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRTARAGR+G +I+LV QY++
Sbjct: 327 GRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDV 386
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 407
E +IE IGKK+ F ++E V LL + V +A R + + +++S
Sbjct: 387 EILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEMRES 431
>sp|Q2H1Q8|RRP3_CHAGB ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=RRP3 PE=3 SV=1
Length = 493
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/427 (56%), Positives = 325/427 (76%), Gaps = 7/427 (1%)
Query: 2 AEEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 61
+EE KTF++LG+ D L +AC+ +GWK P+ IQ E+IP AL+ +D+IGLA+TGSGKTGA
Sbjct: 59 SEEPAPKTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTGA 118
Query: 62 FALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVD 121
FALPILQALL+ + FA VL+PTRELA QI++ FEALGS ISLRCA+++GG+D
Sbjct: 119 FALPILQALLDKPQ------PLFALVLAPTRELAAQIAQSFEALGSLISLRCALILGGLD 172
Query: 122 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 181
M+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL L+YLV+DEADRLL+ DF LD+I
Sbjct: 173 MVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDEADRLLDMDFGPILDKI 232
Query: 182 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 240
L +PR R+T+LFSATM+ KV+ LQRACL++P+K+ ++SKY TV TL Q Y F+P +K
Sbjct: 233 LKFLPRERRTFLFSATMSSKVESLQRACLRDPLKVSISSSKYQTVSTLVQNYVFIPHTHK 292
Query: 241 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 300
D YL+Y+ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALNKF+
Sbjct: 293 DTYLIYLCNEFAGQTIIIFTRTVIETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFR 352
Query: 301 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 360
AG +IL+ TDVA+RGLDIP+VD V+N D+P +SK Y+HRVGRTARAGR+G AIS V QY
Sbjct: 353 AGSRDILVATDVAARGLDIPNVDCVLNLDLPGDSKTYVHRVGRTARAGRSGHAISFVTQY 412
Query: 361 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
+LE +L+IE +G KL E+ E+++V++ RV EA+RI++ IK + R +KG
Sbjct: 413 DLELWLRIEAALGTKLTEYSLEKDDVMVFRPRVEEAQRIAKTEIKALMDDRGKKGSVLKG 472
Query: 421 DIGRQFG 427
GR+ G
Sbjct: 473 GKGRKRG 479
>sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1
Length = 467
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/409 (58%), Positives = 318/409 (77%), Gaps = 7/409 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTFKELG+ ++L EACE +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 48 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPIL 107
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL+E + FF VL+PTRELA QIS+ FE+LG+ + +R V+VGG+DM+ Q++
Sbjct: 108 QALMEKPQ------PFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSI 161
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
+LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 162 SLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPR 221
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+T+LFSATM+ KV+ LQRA L NP+++ + SKY TV TL Q Y F+P K+KD YLVY
Sbjct: 222 ERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVY 281
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + ST++FTRT + T+ LA +LR LG AIP+ G +SQS RLGAL KF+A NI
Sbjct: 282 LLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARLGALGKFRARSRNI 341
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGRTARAG++G+AIS V QY++E +L
Sbjct: 342 LVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRTARAGKSGLAISFVAQYDVEVWL 401
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+IE +GKKL E+ ++EV++L E V EA+R + M +KD K+ +G
Sbjct: 402 RIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMDMKDYNEKKGSRG 450
>sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1
Length = 482
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/410 (58%), Positives = 317/410 (77%), Gaps = 7/410 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
K+FK+LG+ D L EAC+ +G+K P+ IQ E+IP AL+G+DLIGLA+TGSGKT AFALPIL
Sbjct: 56 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 115
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
Q+LL+ + F VL+PTRELA QIS+ FEALGS I ++CAV+VGG+DM+ Q +
Sbjct: 116 QSLLDKPQ------PLFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAI 169
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+DEADRLL+ DF LD+IL V+PR
Sbjct: 170 ALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLPR 229
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPAKYKDCYLVY 246
R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY TV TL Q Y F+P +KD YL+Y
Sbjct: 230 ERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLVHKDTYLIY 289
Query: 247 ILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNI 306
+L E + S ++FTRT + T+ +A++LR LG AIP+ G +SQS RLGALNKF+AG I
Sbjct: 290 LLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREI 349
Query: 307 LICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYL 366
L+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGRTARAG++G AIS V QY++E ++
Sbjct: 350 LVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHRVGRTARAGKSGHAISFVTQYDVEIWM 409
Query: 367 QIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
+IE +GKK E+ ++EV++ RV EA+R ++ +K+ R +KG
Sbjct: 410 RIEAALGKKQEEYQTVKDEVMVFKPRVEEAQRHARNEMKNLHEDRGKKGA 459
>sp|Q0UK12|RRP3_PHANO ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=RRP3 PE=3 SV=2
Length = 546
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/407 (57%), Positives = 316/407 (77%), Gaps = 8/407 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF +LG+R+EL +ACEN+G+KT + IQ E+IP AL GKD+IGLA+TGSGKT AF LPIL
Sbjct: 115 KTFADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLPIL 174
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QALL+ + A+F +++PTRELA QIS+Q +ALGS I+++CA LVGG+DM+ Q +
Sbjct: 175 QALLDKPQ------AYFGLIMAPTRELAYQISQQVDALGSIINVKCATLVGGMDMVPQAI 228
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
AL KRPHI+VA+PGRL+DHL NTKGFSL LKYLVLDEADRLL+ DF SLD+I V+PR
Sbjct: 229 ALSKRPHIIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLDKIFKVLPR 288
Query: 188 M-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYLFSATM+ KV+ LQRA LKNPV++ ++S + V TL Q Y +P KYKD YL+
Sbjct: 289 DDRHTYLFSATMSSKVESLQRAALKNPVRVSISSSSHQVVSTLLQSYMLIPHKYKDLYLI 348
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
++L + +T++FTRT + T+ LA++LR LG +A+P+ G +SQS RLGALNKFKA +
Sbjct: 349 HLLNDNIGHATILFTRTVNETQRLAVLLRTLGFQALPLHGQLSQSNRLGALNKFKAKARD 408
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIPSVD+V+N+D+P +S+ Y+HRVGRTARAG++G A+S V QY+LE +
Sbjct: 409 ILVATDVAARGLDIPSVDLVVNFDLPHDSETYVHRVGRTARAGKSGKAVSFVTQYDLEIF 468
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRR 412
+IE +GK++PE +EV++ ERV EA+R++ +KD ++R+
Sbjct: 469 QRIEHALGKQVPEEKVSRDEVMVYAERVGEAQRVAVREMKDLHDQRK 515
>sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rrp3 PE=3 SV=2
Length = 445
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/425 (55%), Positives = 316/425 (74%), Gaps = 16/425 (3%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF+ELG+ D L EACE +G+ P+ IQ IP ALEG+DLIGLA+TGSGKT AF LP+L
Sbjct: 28 KTFRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPML 87
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
QAL++ + F + +L+PTRELA QI+ EALG+ IS+RC +L+GG+DM+ Q +
Sbjct: 88 QALMDKPQQ------FHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQAI 141
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
ALGK+PH++VATPGRL+DHL NTKGFSL TLKYLVLDEADRLL+ DF LD++L ++P+
Sbjct: 142 ALGKKPHVIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRLLPK 201
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R+TYLFSATM+ KV+ LQRA L +PV++ ++K T L Q Y F+P K+KD YLVY+
Sbjct: 202 -RKTYLFSATMSSKVESLQRASLSDPVRVSVSTKNQTASKLLQSYLFIPHKFKDFYLVYL 260
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + ++FTRT T+ L++MLRNLG AIPI G +SQS RL +LNKF+A N+L
Sbjct: 261 LNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPIHGQLSQSARLASLNKFRARSRNLL 320
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
I TDVA+RGLDIP+VD V+NYD+P +SK YIHRVGRTARAG++G+A S V QYE+E +L+
Sbjct: 321 IATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVELWLR 380
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK---------RRRKGGDE 418
IE +GKK+ E+ E++EV++ ERV +A+R++ +T++D +K R+R D
Sbjct: 381 IEDALGKKVEEYKPEKDEVMIFAERVNDAQRVAALTMRDMQDKDNKGRGPRNRKRTRDDL 440
Query: 419 DDDIG 423
D D G
Sbjct: 441 DQDDG 445
>sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rrp-3 PE=3 SV=1
Length = 515
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/419 (56%), Positives = 322/419 (76%), Gaps = 11/419 (2%)
Query: 3 EEKEV----KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGK 58
E++EV KTFK+LG+ D L EACE +G+K P+ IQ ++IP AL+ +D+IG+A+TGSGK
Sbjct: 81 EQEEVETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGK 140
Query: 59 TGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVG 118
T AFALPILQALL+ + P FA VL+PTRELA QI++ FEALGS ISLRCA+++G
Sbjct: 141 TAAFALPILQALLD-----KPAP-LFALVLAPTRELAAQIAQAFEALGSLISLRCALILG 194
Query: 119 GVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSL 178
G+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +++YLV+DEADRLL+ DF L
Sbjct: 195 GMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPIL 254
Query: 179 DEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYSTVDTLKQQYRFVPA 237
++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ +S KY+TV TLK Y F+P
Sbjct: 255 EKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVSTLKSNYVFIPH 314
Query: 238 KYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALN 297
+KD YLVY+ E + + ++FTRT T+ +A++LR LG AIP+ G +SQS RLGALN
Sbjct: 315 MHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALN 374
Query: 298 KFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV 357
KF+AG IL+ TDVA+RGLDIP+VD VIN+D+P +SK Y+HRVGRTARAG++G AIS+V
Sbjct: 375 KFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIV 434
Query: 358 NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
QY+LE +L+IE +G KL E+P E++EV++ RV EA+R ++ +K + + GG
Sbjct: 435 TQYDLEIWLRIEAALGHKLDEYPLEKDEVMVFKPRVEEAQRHARNEMKSLMENQGKHGG 493
>sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRP3 PE=3 SV=2
Length = 477
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/419 (56%), Positives = 303/419 (72%), Gaps = 7/419 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + K+F EL L EL+EA + + + P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 61 ELKFKSFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFA 120
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQAL E A++ VL+PTRELA QI E F+ALGS + LR +VGG+DMM
Sbjct: 121 IPILQALWEAQA------AYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMM 174
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 175 DQARDLMRKPHILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 234
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
+IP R TYLFSATMT K+ KLQRA L NPV++ ++KY T D L Q V YK+ Y
Sbjct: 235 IIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAVSNKYQTADNLVQSMMLVSDGYKNTY 294
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S ++FTRTC ++ AL+ R LG A+P+ G ++Q++RLG+LNKFKAG+
Sbjct: 295 LIHLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAGK 354
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAG++G +ISL+ QY+LE
Sbjct: 355 ANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGKSGKSISLITQYDLE 414
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMTIKDSGNKRRRKGGDEDDD 421
YL+IE ++GKKLP+ P+ + VL L V A + KD KR K +D D
Sbjct: 415 MYLRIESVLGKKLPKDPSPSKAVLDTLHVHVDRASAEAIRQTKDFHEKRNPKKNRDDRD 473
>sp|A4RGD1|RRP3_MAGO7 ATP-dependent rRNA helicase RRP3 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=RRP3 PE=3 SV=1
Length = 538
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/417 (56%), Positives = 316/417 (75%), Gaps = 9/417 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
EE K+F++LG+ + L EACE + +K P+ IQ +AIP AL+G+D+IG+A+TGSGKT AF
Sbjct: 105 EETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAF 164
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPILQ+LLE + F VL+PTRELA QI + FEALG+ ISLRCAV+VGG+DM
Sbjct: 165 ALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDM 218
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
+ Q+ ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+DEADRLL+ DF LD+IL
Sbjct: 219 VSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKIL 278
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKD 241
+PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+ TV TL Q F+P K+KD
Sbjct: 279 KFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQNPLFIPHKHKD 338
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+ E + +T+VFTRT + + ++++LR L AIP+ G +SQS RLGALNKFKA
Sbjct: 339 VYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLHGQLSQSMRLGALNKFKA 398
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
+IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGRTARAGR+G AIS++ QY+
Sbjct: 399 RSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYD 458
Query: 362 LEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 416
LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++ +K R +KG
Sbjct: 459 LELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAREEMKALHEDRGKKGA 515
>sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=RRP3 PE=3 SV=2
Length = 475
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/418 (57%), Positives = 304/418 (72%), Gaps = 7/418 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E++ TF EL L EL+EA E + + P+ IQ+ AIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 60 EQQFHTFSELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFA 119
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ+L E QR ++A VL+PTRELA QI E F+ALGSG+ +R +VGG+DMM
Sbjct: 120 IPILQSLWEA---QR---PYYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMM 173
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI+VATPGR+MDHL NTKGFSL +L+YLV+DEADRLL+ DF +LD+IL
Sbjct: 174 DQARDLMRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILK 233
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K+ KLQRA L PVK+ ++KY T D L Q V YK+ +
Sbjct: 234 VIPTKRTTYLFSATMTNKIAKLQRASLHEPVKVAVSNKYQTADNLVQSMMLVSDGYKNTF 293
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRTC T+ L+ R LG A+P+ G ++QS+RLG+LNKFK+G+
Sbjct: 294 LIHLLNEFMGKSIIVFTRTCAHTQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGK 353
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAG++G +ISLV QY+LE
Sbjct: 354 ANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLE 413
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMTIKDSGNKRRRKGGDEDD 420
YL+IE ++G KLP+ P+ +VL L V A + KD KR +K D+ D
Sbjct: 414 MYLRIESVLGFKLPKDPSPPRDVLNALHVHVDRASAEAIKQTKDFHEKRTKKKRDDRD 471
>sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=RRP3 PE=3 SV=2
Length = 539
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/384 (58%), Positives = 289/384 (75%), Gaps = 6/384 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E + KTFKEL L +L+E+ E++ + P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AFA
Sbjct: 119 ELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFA 178
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PILQ+L + +FA VL+PTREL QI + F+ALGS + LR + +VGG+DMM
Sbjct: 179 IPILQSLWHAQQ------PYFALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMM 232
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PH++VATPGR+MDHL +TKGFSL LKYLV+DEADRLL+ DF +LD+IL
Sbjct: 233 DQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILK 292
Query: 184 VIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCY 243
VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T D L Q V YK+
Sbjct: 293 VIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYKNTI 352
Query: 244 LVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
L+++L E S +VFTRT + AL+ R LG A+P+ G +SQS+RLG+LNKFK+ +
Sbjct: 353 LIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQ 412
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELE 363
NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRTARAGR+G +ISL+ QY+LE
Sbjct: 413 ANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLE 472
Query: 364 WYLQIEKLIGKKLPEFPAEEEEVL 387
YL+IE ++GKKLP+ +EVL
Sbjct: 473 MYLRIESVLGKKLPKEDKPPKEVL 496
>sp|A3LS22|RRP3_PICST ATP-dependent rRNA helicase RRP3 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RRP3 PE=3 SV=3
Length = 484
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/421 (54%), Positives = 297/421 (70%), Gaps = 9/421 (2%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+E + TF EL L EL+EA + + + P+ IQ+EAIPHALEGKD+IGLAQTGSGKT AF
Sbjct: 66 DEVKFSTFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAF 125
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PILQ+L E +F VL+P RELA QI E F+ALGS + +R LVGG+DM
Sbjct: 126 AIPILQSLWEAQT------PYFGLVLAPARELAYQIKETFDALGSTMGVRTVCLVGGMDM 179
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGR+MDHL +TKGFSL LKY V+DEAD+LL+ +F LD+IL
Sbjct: 180 MDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKIL 239
Query: 183 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
IP R TYLFSATMT K++KLQRA L NPV++ +SKY T D L Q V YK+
Sbjct: 240 KQIPSKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLIQSMMLVSDGYKNT 299
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
YL+++L E S ++F RT T+ +++ R LG A+P+ G ++Q++RLG+LNKFK+G
Sbjct: 300 YLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPLHGDLTQAQRLGSLNKFKSG 359
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
NILI TDVA+RGLDIPSVD+VINYDIPT+SK Y+HRVGRTARAGR+G +ISLV QY+L
Sbjct: 360 TANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRTARAGRSGKSISLVTQYDL 419
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE---AKRISQMTIKDSGNKRRRKGGDED 419
E YL+IE+ I KKLP+ P+ + +L L + A+ I Q +R R+G D+
Sbjct: 420 EMYLRIEQSIQKKLPKDPSPPKAMLDALHVHVDRAYAEAIRQTKEFHEKTRRGRRGKDDK 479
Query: 420 D 420
D
Sbjct: 480 D 480
>sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRP3 PE=3 SV=1
Length = 501
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+GAL+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGALDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2
Length = 501
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/395 (53%), Positives = 287/395 (72%), Gaps = 7/395 (1%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
E++ ++F EL L EL++AC+N+ + P+ IQ++AIP ALEG D+IGLAQTGSGKT AF
Sbjct: 76 EDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAF 135
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
A+PIL L E ++AC+L+PTRELA QI E F++LGS + +R +VGG++M
Sbjct: 136 AIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNM 189
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL
Sbjct: 190 MDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
Query: 183 NVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 241
+IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 250 KIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKN 309
Query: 242 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 301
YL+Y+L E + ++FTRT L+ + L A + G ++Q++R+G+L+ FKA
Sbjct: 310 TYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKA 369
Query: 302 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYE 361
G+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+
Sbjct: 370 GKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 429
Query: 362 LEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 430 LELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRP3 PE=3 SV=1
Length = 487
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/386 (55%), Positives = 280/386 (72%), Gaps = 7/386 (1%)
Query: 12 ELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALL 71
EL L EL+EAC+N+ + P+ IQ++AIP AL+G D+IGLAQTGSGKT AFA+PIL L
Sbjct: 71 ELDLVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQLW 130
Query: 72 EIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGK 131
+ ++AC+L+PTRELA QI E F++LGS + +R +VGG+ MM Q L +
Sbjct: 131 HDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMR 184
Query: 132 RPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM-RQ 190
+PHI++ATPGRLMDHL NTKGF+L LKYLV+DEADRLL+ +F LD ILN+IP R
Sbjct: 185 KPHIIIATPGRLMDHLENTKGFNLRKLKYLVMDEADRLLDMEFGPVLDRILNIIPTQGRT 244
Query: 191 TYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTE 250
TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ +L+Y+L E
Sbjct: 245 TYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNE 304
Query: 251 VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICT 310
ST+VFTRT ++ + L A + G ++Q++R GAL+ FKAG+ +IL+ T
Sbjct: 305 FIGKSTIVFTRTKANAERISNLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVAT 364
Query: 311 DVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEK 370
DVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L+IE
Sbjct: 365 DVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIED 424
Query: 371 LIGKKLPEFPAEEEEVLLLLERVTEA 396
++GKKLP+ +++ +L L + V +A
Sbjct: 425 VLGKKLPKENVDKDAILALRDSVDKA 450
>sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRP3 PE=3 SV=1
Length = 493
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/410 (52%), Positives = 291/410 (70%), Gaps = 9/410 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +L L EL++AC+N+ + P+ IQA AIP AL G D+IGLAQTGSGKT AFA+PIL
Sbjct: 74 SFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILN 133
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E + ++ACVL+PTRELA QI E F++LGS + +R +VGG++MM Q
Sbjct: 134 KLWEDQQ------PYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARD 187
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP-R 187
L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+DEADRLL+ +F LD IL +IP +
Sbjct: 188 LMRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIPTK 247
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ +L+Y+
Sbjct: 248 GRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFLIYL 307
Query: 248 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 307
L E + ++FTRT L+ + L A + G ++Q++R GAL+ FKAG+ +IL
Sbjct: 308 LNEFIGKTVIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSIL 367
Query: 308 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 367
+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE L+
Sbjct: 368 VATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILR 427
Query: 368 IEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQMTIKDSGNKRRRKG 415
IE+++GKKLP+ ++ +L L + V +A + + +M ++ + R KG
Sbjct: 428 IEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVMEMNRRNKEKQARGKG 477
>sp|Q75EW9|RRP3_ASHGO ATP-dependent rRNA helicase RRP3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRP3
PE=3 SV=2
Length = 486
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/394 (53%), Positives = 286/394 (72%), Gaps = 7/394 (1%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E+ +F+EL L EL+EAC+N+ + P+ IQ++AIP AL+GKD+IGLAQTGSGKT AFA
Sbjct: 62 EEGFSSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFA 121
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
+PIL L + ++AC+L+PTRELA QI E F++LGS + +R +VGG++MM
Sbjct: 122 IPILNRLWHDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMM 175
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILN 183
Q L ++PHI++ATPGRLMDHL NTKGF+L L++LV+DEADRLL+ +F LD IL
Sbjct: 176 DQARDLMRKPHIIIATPGRLMDHLENTKGFALRKLQFLVMDEADRLLDMEFGPVLDRILK 235
Query: 184 VIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 242
IP + R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+
Sbjct: 236 NIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNT 295
Query: 243 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
+L+Y+L E +T+VFTRT ++ + L A + G ++Q++R GAL+ FKAG
Sbjct: 296 FLIYLLNEFIGKTTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAG 355
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G ++SLV+QY+L
Sbjct: 356 KKSILVATDVAARGLDIPSVDLVINYDIPVDSKSYIHRVGRTARAGRSGKSVSLVSQYDL 415
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
E L+IE+++GKKLP+ ++ VL L + V +A
Sbjct: 416 ELILRIEEVLGKKLPKENVDKSIVLSLRDSVDKA 449
>sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=RRP3 PE=3 SV=1
Length = 506
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/391 (54%), Positives = 284/391 (72%), Gaps = 11/391 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +L L EL+EAC+N+ + P+ IQA +IP AL+G D+IGLAQTGSGKT AFA+PIL
Sbjct: 87 SFSDLDLVPELIEACKNLNFAKPTPIQARSIPPALQGHDIIGLAQTGSGKTAAFAIPILN 146
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L + ++AC+L+PTRELA QI E F++LGS + +R A +VGG++MM Q
Sbjct: 147 RLWHDQQ------PYYACILAPTRELAQQIKETFDSLGSLMGVRSACIVGGMNMMDQARD 200
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP-R 187
L ++PHI++ATPGRLMDHL NT+GFSL LK+LV+DEADRLL+ +F LD IL +IP +
Sbjct: 201 LMRKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQ 260
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
R TYLFSATMT K+ KLQRA L NPVK ++KY TVDTL Q VP K+ YL+Y+
Sbjct: 261 GRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNTYLIYL 320
Query: 248 LTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAIPISGHMSQSKRLGALNKFKAGECN 305
+ E + +VFTRT +A R+ L NL + A + G ++Q++R G+L+ FKAG +
Sbjct: 321 MNEFIGKTIIVFTRTKANAERITTLA--NLLEFSATALHGDLNQNQRTGSLDLFKAGRRS 378
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGRTARAGR+G +ISLV+QY+LE
Sbjct: 379 ILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELI 438
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 396
L+IE ++GKKLP+ ++ +L L + V +A
Sbjct: 439 LRIEDVLGKKLPKENVNKDAILTLRDSVDKA 469
>sp|A5E6W6|RRP3_LODEL ATP-dependent rRNA helicase RRP3 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=RRP3 PE=3 SV=1
Length = 504
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/412 (49%), Positives = 283/412 (68%), Gaps = 12/412 (2%)
Query: 7 VKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 66
V++F E L EL+E+ +++ + P+ IQA AIPHAL+GKD++G+A+TGSGKT AFA+PI
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 67 LQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQT 126
LQ L A+ ++A VL+PTRELA QI E F+ALGS + LR ++GG+ MM+Q
Sbjct: 157 LQTLYTAAQ------PYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQA 210
Query: 127 LALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L ++PH+++ATPGRL+DHL +TKGFSL L+YLV+DE DR+++ D+ K++D+IL IP
Sbjct: 211 RDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIP 270
Query: 187 -RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
R TYL++ATM+++++K +R+ L +PV++E D LKQ KD L+
Sbjct: 271 SHQRITYLYTATMSREIEKFKRS-LNSPVQVEIVKLEKVPDKLKQTMCLTSPNTKDTRLI 329
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
I+ S ++FTRT TR LML NLG + + + G M QS+RLGA+NKFKAG
Sbjct: 330 QIVNLDSMKRVIIFTRTVVHTRRCCLMLLNLGFKCVELHGQMPQSRRLGAINKFKAG-TP 388
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
IL+ TDVA+RGLDIP+VD+VINYDIP + YIHRVGRTARAG+ G AISLV QY+LE Y
Sbjct: 389 ILVATDVAARGLDIPAVDLVINYDIP-DPTLYIHRVGRTARAGKAGKAISLVTQYDLESY 447
Query: 366 LQIEKLIGKKLP--EFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
L+IE +G KLP + P +E + L + +K I + +++ NK R +G
Sbjct: 448 LRIENTLGTKLPKEDLPLDEMQGLQVSVDRALSKAIQMLRNEENDNKLRHRG 499
>sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium
discoideum GN=ddx49 PE=3 SV=1
Length = 508
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 265/401 (66%), Gaps = 8/401 (1%)
Query: 8 KTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 67
KTF+ELGL LV C+ +G+K PS IQA IP L+G+D+I A+TGSGKT +FA+PIL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 68 QALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTL 127
L +E+ V FA +L+PTRELA+QI EQF A+G+ +++ C+V++GG+D + Q L
Sbjct: 64 NQL---SEDPYGV---FAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQAL 117
Query: 128 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIP- 186
L KRPHI+VATPGRL HL N +L K+LVLDEADRLL +DFE + IL +P
Sbjct: 118 ILDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPP 177
Query: 187 -RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 245
RQT LFSATMTK + KL L P E SKY TVDTLKQ+Y ++PA KDCYLV
Sbjct: 178 PEKRQTLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLV 237
Query: 246 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 305
YIL + SS +VF C A + ML L ++ + + Q RL AL FK+G+
Sbjct: 238 YILKKHEGSSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVK 297
Query: 306 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 365
+L+ TDVASRGLDIP V +VINY + +SKDYIHRVGRTAR GR+G AIS + +++
Sbjct: 298 VLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSLI 357
Query: 366 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 406
IE++I K+L + +++EV L+ + A++I ++ + +
Sbjct: 358 KGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDE 398
>sp|Q9Y6V7|DDX49_HUMAN Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens GN=DDX49
PE=1 SV=1
Length = 483
Score = 362 bits (930), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/445 (45%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F ELGL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPYG------IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ E S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------KDSGNKRRR-- 413
IE+ I KKL EF EE EVL +L +V +R ++ + K NKR++
Sbjct: 358 HLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKEINKRKQLI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQKNRR 442
>sp|Q4FZF3|DDX49_MOUSE Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49
PE=2 SV=1
Length = 480
Score = 357 bits (915), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 270/445 (60%), Gaps = 23/445 (5%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F E+GL LVE C +G K P+ +Q IP LEG+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L E F VL+PTRELA QI+EQF LG + L+ ++VGG+DM+ Q L L
Sbjct: 64 LSEDPY------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEKSLDEILNVIP 186
++PH+V+ATPGRL DHL ++ F++ +++LV+DEADRLL DF L+ IL +P
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVP 177
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
RQT LFSAT+T +K+LQ P EA + TV+ L Q+Y VP K KD YLV+
Sbjct: 178 ARRQTLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 247 ILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 302
++ ++ S ++FT TC ++L +MLR + + M Q +R AL KFK+
Sbjct: 238 LVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSS 297
Query: 303 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 362
ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G AI+LV QY++
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG-------NKRRR-- 413
IE+ I ++L E EE EVL +L +V +R ++ ++ S NKR++
Sbjct: 358 HLLHAIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMI 417
Query: 414 -KGGDEDDDIGRQFGINKKKLSKRK 437
+G D D + R+ + K K R+
Sbjct: 418 LEGKDPDLEAKRKAELAKIKQQNRR 442
>sp|Q9SA27|RH36_ARATH DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana
GN=RH36 PE=2 SV=1
Length = 491
Score = 355 bits (910), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/414 (46%), Positives = 269/414 (64%), Gaps = 15/414 (3%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F+ LGL + VE C+ +G + P+ +Q +P L G+D++GLAQTGSGKT AFALPIL
Sbjct: 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
L AE+ V FA V++PTRELA Q++EQF+ALGS ++LRC+V+VGG+DM+ QT++L
Sbjct: 120 L---AEDPYGV---FALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 187
RPHIV+ TPGR+ L N K+LVLDEADR+L+ F+ L I +P+
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 233
Query: 188 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 247
RQT LFSATMT ++ L EA TVDTL QQ+ F K+ YLV+I
Sbjct: 234 SRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHI 293
Query: 248 LTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGEC 304
L+++ S M+F TC + L+LML L I + SQS RL AL+KFK+G+
Sbjct: 294 LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 353
Query: 305 NILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEW 364
IL+ TDVASRGLDIP+VD+VINYDIP + +DY+HRVGRTARAGR G+A+S++ + +++
Sbjct: 354 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 413
Query: 365 YLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN----KRRRK 414
+IE+ +GKK+ + + L + +V++AKR++ M + D+G K RRK
Sbjct: 414 IHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRK 467
>sp|Q8L4E9|RH36_ORYSJ DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp.
japonica GN=Os07g0633500 PE=3 SV=1
Length = 501
Score = 346 bits (887), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/408 (44%), Positives = 259/408 (63%), Gaps = 12/408 (2%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
TF ELGL LV+ C+++G + P+ +Q IP ALEG+D++G+A+TGSGKT AFALPIL
Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILH 137
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
L E+ V A L+PTRELA Q++EQF ALG+ + LRC +GG D + Q
Sbjct: 138 RL---GEDPYGVAAL---ALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKG 191
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDEADRLLNDDFEKSLDEILNVIP 186
L +RPH+VVATPGR+ + + + K+LVLDEADR+L+ +FE+ L I +P
Sbjct: 192 LARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLP 251
Query: 187 RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVY 246
+ RQT+LFSAT++ ++ L N EA + TVDTLKQ Y VP K+ YL Y
Sbjct: 252 KKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFY 311
Query: 247 ILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGE 303
+L++++ S +VF TC + L +L LG A+ + H QS+RL AL+ FK+ +
Sbjct: 312 LLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSK 371
Query: 304 CNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLV-NQYEL 362
+L+ TDVASRGLDI +VD+VINYD+P +DYIHRVGRTARA R G++IS + Q ++
Sbjct: 372 VPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDI 431
Query: 363 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK 410
+IE ++GK+L + E +V +V +A+R++ M + D G++
Sbjct: 432 RLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARRLANMKMADEGHE 479
>sp|Q8SR63|RRP3_ENCCU ATP-dependent rRNA helicase RRP3 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RRP3 PE=3 SV=1
Length = 400
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 248/404 (61%), Gaps = 7/404 (1%)
Query: 10 FKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 69
F +L + + L++ C+ G P+++Q + IP L G D+I ++QTGSGKT AF LPI+
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 70 LLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLAL 129
LL+ +N+ +F+ V++PTREL+ QI+E F LR +LVGG + Q L
Sbjct: 63 LLQ--KNR----SFYCLVVAPTRELSSQIAECFNMF-QATGLRVCLLVGGANFNVQANQL 115
Query: 130 GKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMR 189
KRPH+VV TPGR+ +H+ TK F ++ VLDEADR DF + L+ I+ + R
Sbjct: 116 SKRPHVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLETIIPSLREKR 175
Query: 190 QTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT 249
QT LF+ATM+ ++ KL + LK P I A KY TV LK+ Y FV K+K+ LV +L
Sbjct: 176 QTLLFTATMSDEISKLSSSILKRPKTIRTAEKYETVPALKEYYLFVAMKWKNSALVELLE 235
Query: 250 EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILIC 309
S +VF C R+++L L LG + + G +SQ KR A+ FK N+L+C
Sbjct: 236 MSQGMSVIVFVSMCVTARVMSLALARLGFCSEALHGELSQEKREEAMRSFKESRFNVLVC 295
Query: 310 TDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIE 369
TD+ SRGLDI VD+VIN+D+P + KDYIHRVGRTARAGR+G AI+LV QY++E +IE
Sbjct: 296 TDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTARAGRSGTAITLVTQYDVEQIQKIE 355
Query: 370 KLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 413
+ KKL EF ++ + R+ EA + +Q T+K+ + RR
Sbjct: 356 FTLEKKLEEFKMMKKNFGTICARIEEAIQEAQETLKEERKRNRR 399
>sp|Q9HGM5|DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp8 PE=3 SV=1
Length = 453
Score = 317 bits (812), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 273/448 (60%), Gaps = 22/448 (4%)
Query: 4 EKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 63
E K+F +LG+ L++ + + P+ IQ I LEG++ IG A+TGSGKT AFA
Sbjct: 3 EHTRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFA 62
Query: 64 LPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMM 123
LPI++ + FA +L+PTRELAIQI EQF ALG+ ++L+ A++VGG+DM+
Sbjct: 63 LPIIEKW------SKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMI 116
Query: 124 QQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKYLVLDEADRLLNDDFEKSLD 179
+Q++ L KRPH+VVATPGRL D L + G L +K+LV+DEADRLL+ F LD
Sbjct: 117 RQSIDLSKRPHVVVATPGRLAD-LIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLD 175
Query: 180 EILNVIPRM--RQTYLFSATMTKKVKKLQRACLKN---PVKIEAA--SKYSTVDTLKQQY 232
+ +V+P RQT LF+AT+T +++L+ KN P+ + S TL+Q Y
Sbjct: 176 DCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSY 235
Query: 233 RFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 290
FV ++ ++ YLV++LT E + S ++F L+ +LR L R + M Q
Sbjct: 236 IFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQR 295
Query: 291 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 350
+R+ +L +F+A IL+ TDVASRGLDIPSV +VIN+D+P + DYIHRVGRTARAGR+
Sbjct: 296 ERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRS 355
Query: 351 GVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTIKDSGN 409
G +IS+V + +++ IE +G KL E+ E ++L ++ VT+AKR + + + D G
Sbjct: 356 GESISIVTERDVDLVHAIEDRVGTKLSEYEHVSENKMLEYIKEVTDAKRQASLEMIDRGF 415
Query: 410 KRRRKGGDEDDDIGRQFGINKKKLSKRK 437
RR+ +E + NK K S RK
Sbjct: 416 GERRQKRNEKRLMANGIS-NKLKNSGRK 442
>sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP8 PE=3 SV=2
Length = 441
Score = 317 bits (811), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 269/442 (60%), Gaps = 40/442 (9%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F+ELG+ L EA ++ TP+ IQ+ IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E + VL+PTRELA+QI+EQF ALGS ++++ +V+VGG D+++Q L
Sbjct: 62 QWSEDPS------GIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKYLVLDEADRLLNDDFEKSLDEILNVI 185
L +RPH VVATPGRL DH+ N+ + L +KYL+LDEADRLL++ F L+ N++
Sbjct: 116 LQRRPHFVVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRLLSNSFGGDLERCFNIL 175
Query: 186 PRM--RQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ + K PV ++E K + TL +Y FVP+
Sbjct: 176 PSTDKRQTLLFTATVTDAVRALKDRPVPKGKLPVFIHEVETVDKVAIPSTLSVKYVFVPS 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + S S +++FT LL LR L R + M Q++R +
Sbjct: 236 YVKEAYLHSILNLPQYSDSLSIIFTNRTATAELLRRTLRKLEFRVASLHSEMPQTERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKAG ILI TDVASRGLDIP+V++V+NYDIP ++ D+IHRVGRTARAGR G AIS
Sbjct: 296 LHRFKAGAAKILIATDVASRGLDIPTVELVVNYDIPADADDFIHRVGRTARAGRKGDAIS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK----R 411
+V + +++ L IE+ I KK+ L+E +++ K IKDS NK +
Sbjct: 356 IVAEKDVDRILAIEERINKKMD-----------LIEDISDNK-----VIKDSLNKTSVAK 399
Query: 412 RRKGGDED-DDIGRQFGINKKK 432
R D D ++ G + INK K
Sbjct: 400 REAFMDMDRENFGEKRKINKSK 421
>sp|Q59PR3|DBP8_CANAL ATP-dependent RNA helicase DBP8 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP8 PE=3 SV=1
Length = 440
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 263/437 (60%), Gaps = 30/437 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+F +LG+ L E+ + + TP+ IQ+ IP L+G D IG A+TGSGKT AFA P+L
Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
+ +E+ + F +L+PTRELA+QI+EQF ALG+ ++++ AV+VGG D +QQTLA
Sbjct: 62 ---QWSEDPFGI---FGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLA 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYLVLDEADRLLNDDFEKSLDEILNVI 185
L ++PH V+ATPGRL DH+ N+ ++ L KYLVLDEADRLL++ F L +V+
Sbjct: 116 LQRKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVL 175
Query: 186 PRM--RQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ K PV ++E K + TL+ Y FVP+
Sbjct: 176 PTSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPS 235
Query: 238 KYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + S+ ++F +L MLR L R + M QS+R +
Sbjct: 236 YVKEAYLNSILHLEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++FKAG ILI TDVASRGLDIP+V++VIN+DIP + D+IHRVGRTARAGR G A+S
Sbjct: 296 LHRFKAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDAVS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
++ + +++ IE+ I KK+ LLE V + I + S KR
Sbjct: 356 IIGEKDIDRIQSIEERINKKME-----------LLEDVNDDNVIKESLSATSVAKRESLM 404
Query: 416 GDEDDDIGRQFGINKKK 432
+ ++ G + IN+KK
Sbjct: 405 EMDKENFGERKKINRKK 421
>sp|A5DLE0|DBP8_PICGU ATP-dependent RNA helicase DBP8 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP8 PE=3 SV=2
Length = 433
Score = 308 bits (788), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 182/441 (41%), Positives = 262/441 (59%), Gaps = 30/441 (6%)
Query: 9 TFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 68
+FK+LG+ L+EA + ++P+ IQAE IP L G+D IG A+TGSGKT AFA P++
Sbjct: 2 SFKDLGVSKWLLEALAAMKIRSPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMT 61
Query: 69 ALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLA 128
E + VL+PTRELA+QI+EQF ALG+ ++++ AV+VGG DM++Q L
Sbjct: 62 KWSE------DPFGIYGLVLTPTRELALQIAEQFLALGASMNIKVAVVVGGEDMVKQALE 115
Query: 129 LGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YLVLDEADRLLNDDFEKSLDEILNVI 185
+ K PH ++ATPGRL DH+ N+ ++G LK +LVLDEADRLL++ F L+ ++
Sbjct: 116 IQKSPHFIIATPGRLADHILNSGDDTVGGLKRIKFLVLDEADRLLSNSFGSDLERCFKIL 175
Query: 186 P--RMRQTYLFSATMTKKVKKLQRACL---KNPV---KIEAASKYSTVDTLKQQYRFVPA 237
P RQT LF+AT+T V+ L+ + K PV +I + + + TL Y FVP+
Sbjct: 176 PDASKRQTLLFTATVTDAVRALKDKPVPEGKKPVFIHEIVSKDQVAIPATLTISYVFVPS 235
Query: 238 KYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGA 295
K+ YL IL + +S +VF +L LR L R + M QS+R +
Sbjct: 236 YVKEAYLHNILVSPKYEKASAIVFVNRTYTAEILRRTLRKLDIRVASLHSEMPQSERTNS 295
Query: 296 LNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAIS 355
L++F+AG +LI TDVASRGLDIP+V++V+N DIP + DYIHRVGRTARAG+ G ++S
Sbjct: 296 LHRFRAGAARVLIATDVASRGLDIPNVELVVNQDIPADPDDYIHRVGRTARAGKKGGSVS 355
Query: 356 LVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 415
+V++ ++E L IE I KK+ LLE V + K I + + KR
Sbjct: 356 IVSEKDVERILAIENHINKKMD-----------LLEEVNDDKIIKESLSIVTAAKRESVA 404
Query: 416 GDEDDDIGRQFGINKKKLSKR 436
E + G + INK+K +R
Sbjct: 405 DMEKEGFGEKRKINKRKREER 425
>sp|Q07886|DDX49_DROME Probable ATP-dependent RNA helicase Dbp45A OS=Drosophila
melanogaster GN=Dbp45A PE=2 SV=2
Length = 521
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 255/437 (58%), Gaps = 30/437 (6%)
Query: 3 EEKEVKTFKELGLRDELVEACENVGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAF 62
+ KE F+ LGLR LV+ +G K + IQ + IP L G+D IG A+TGSGKT AF
Sbjct: 2 QRKEANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAF 61
Query: 63 ALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDM 122
ALPIL+ L E + FA VL+PT ELA QISEQF G + +R V+ GG D
Sbjct: 62 ALPILERLSE------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQ 115
Query: 123 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 182
M ++ L +RPHIVVA PGRL DHLT FS LKYLV+DEADR+LN DF++SL I
Sbjct: 116 MVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIE 175
Query: 183 NVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEAASKYSTVDTLKQQYRFVPA 237
+P+ RQ FSATM +K+ + C + S +TV+TL Q+Y
Sbjct: 176 RCLPKTRQNLFFSATMKDFIKESSIFPIASDCF----EWSQDSDVATVETLDQRYLLCAD 231
Query: 238 KYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 293
+D L+ L E ++ M+FT T +LL++ L+N+ + + G M Q +R+
Sbjct: 232 YDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERV 291
Query: 294 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 353
AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YIHRVGRTARAGR G++
Sbjct: 292 AALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMS 351
Query: 354 ISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSG---- 408
IS+ +LE IE+ I KL E P ++ V + +V +R S+M + ++
Sbjct: 352 ISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDER 411
Query: 409 --NKRRR----KGGDED 419
N RR+ +G D D
Sbjct: 412 AQNYRRKTWIMEGKDPD 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,685,283
Number of Sequences: 539616
Number of extensions: 6322963
Number of successful extensions: 24106
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 312
Number of HSP's that attempted gapping in prelim test: 18176
Number of HSP's gapped (non-prelim): 2144
length of query: 437
length of database: 191,569,459
effective HSP length: 120
effective length of query: 317
effective length of database: 126,815,539
effective search space: 40200525863
effective search space used: 40200525863
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)