Query         013728
Match_columns 437
No_of_seqs    156 out of 2037
Neff          10.8
Searched_HMMs 29240
Date          Mon Mar 25 16:00:20 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013728.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013728hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3ld6_A Lanosterol 14-alpha dem 100.0   1E-73 3.6E-78  551.4  35.0  392   34-435     8-455 (461)
  2 2ve3_A Putative cytochrome P45 100.0 7.1E-71 2.4E-75  528.7  35.4  388   34-434     9-444 (444)
  3 3tbg_A Cytochrome P450 2D6; mo 100.0   5E-71 1.7E-75  536.1  31.4  392   33-435     6-477 (479)
  4 3k9v_A 1,25-dihydroxyvitamin D 100.0   1E-69 3.6E-74  527.2  32.7  391   33-433    20-482 (482)
  5 3nxu_A Cytochrome P450 3A4; al 100.0 1.6E-69 5.5E-74  526.1  32.0  388   37-435    14-476 (485)
  6 3i3k_A Lanosterol 14-alpha dem 100.0 3.3E-68 1.1E-72  513.4  35.0  386   34-429     8-450 (461)
  7 3s79_A Cytochrome P450 19A1; o 100.0 5.4E-68 1.8E-72  517.8  34.8  387   35-436    43-498 (503)
  8 3e6i_A CYPIIE1, P450-J, cytoch 100.0 4.7E-68 1.6E-72  514.7  34.0  391   34-435     7-473 (476)
  9 2cib_A Cytochrome P450 51; hem 100.0 7.4E-68 2.5E-72  509.4  33.4  386   37-435     4-450 (455)
 10 3swz_A Steroid 17-alpha-hydrox 100.0 3.6E-68 1.2E-72  517.6  30.7  391   35-434     6-479 (494)
 11 3gw9_A Sterol 14alpha-demethyl 100.0 2.7E-67 9.2E-72  505.8  34.8  382   36-434     2-450 (450)
 12 2fdv_A Cytochrome P450 2A6; CY 100.0 2.2E-67 7.6E-72  509.4  32.0  386   37-434    10-473 (476)
 13 3pm0_A Cypib1, cytochrome P450 100.0 2.6E-67 8.7E-72  513.6  29.8  389   34-434     6-484 (507)
 14 1po5_A Cytochrome P450 2B4; ox 100.0 4.6E-67 1.6E-71  507.2  30.6  387   36-434     9-473 (476)
 15 3qz1_A Steroid 21-hydroxylase; 100.0 1.4E-67 4.7E-72  514.0  27.1  387   34-436    26-486 (496)
 16 1r9o_A Cytochrome P450 2C9; mo 100.0   5E-67 1.7E-71  507.2  29.3  386   37-434    11-474 (477)
 17 3n9y_A Cholesterol SIDE-chain  100.0 5.8E-67   2E-71  508.4  28.7  391   33-436     5-477 (487)
 18 2hi4_A Cytochrome P450 1A2; CY 100.0 2.1E-66 7.2E-71  504.8  32.2  388   35-434    14-488 (495)
 19 3czh_A Cytochrome P450 2R1; vi 100.0 6.3E-66 2.2E-70  499.5  35.2  389   35-434    10-476 (481)
 20 2ij2_A Cytochrome P450 BM3; mo 100.0 3.2E-66 1.1E-70  499.9  31.4  384   37-435     3-453 (470)
 21 3dbg_A Putative cytochrome P45 100.0 1.7E-67 5.9E-72  508.9  20.5  382   36-432    22-460 (467)
 22 3v8d_A Cholesterol 7-alpha-mon 100.0 9.9E-65 3.4E-69  492.9  24.8  385   34-431    10-483 (491)
 23 3mdm_A Cholesterol 24-hydroxyl 100.0 1.3E-63 4.6E-68  480.6  30.9  366   61-435    10-443 (456)
 24 3dax_A Cytochrome P450 7A1; ch 100.0   9E-64 3.1E-68  486.5  25.4  387   34-433    10-485 (491)
 25 3b98_A Prostaglandin I2 syntha 100.0 1.3E-62 4.4E-67  476.3  27.9  379   34-434    15-471 (475)
 26 3b6h_A Prostacyclin synthase;  100.0 1.5E-61   5E-66  471.5  32.2  388   34-434    15-490 (498)
 27 1izo_A P450bsbeta, cytochrome  100.0 4.9E-61 1.7E-65  456.7  31.4  359   45-434     8-416 (417)
 28 2cd8_A Cytochrome P450 monooxy 100.0 6.4E-61 2.2E-65  457.2  29.5  360   36-434    25-429 (436)
 29 3awm_A Fatty acid alpha-hydrox 100.0 1.5E-59 5.1E-64  446.2  30.1  360   39-433     4-413 (415)
 30 1ued_A P450 OXYC, P450 monooxy 100.0 1.3E-58 4.3E-63  437.8  30.4  352   31-430     4-406 (406)
 31 3ejb_B Biotin biosynthesis cyt 100.0 1.8E-58   6E-63  437.3  31.3  338   61-434    13-397 (404)
 32 1jfb_A Nitric-oxide reductase  100.0 3.5E-58 1.2E-62  435.2  28.9  352   38-429     2-403 (404)
 33 1n97_A CYP175A1; electron tran 100.0 2.1E-59 7.2E-64  441.0  17.1  354   41-434     3-387 (389)
 34 3a4g_A Vitamin D hydroxylase;  100.0 5.6E-57 1.9E-61  426.7  32.2  338   61-434    20-402 (411)
 35 1cpt_A Cytochrome P450-TERP; o 100.0 1.5E-57 5.1E-62  433.7  26.4  357   35-433     4-428 (428)
 36 2zwu_A Camphor 5-monooxygenase 100.0 8.8E-58   3E-62  432.5  23.9  362   34-434     8-411 (415)
 37 3r9b_A Cytochrome P450 164A2;  100.0 2.4E-57 8.2E-62  431.5  26.8  356   39-434     7-418 (418)
 38 3aba_A Cytochrome P450; oxidor 100.0 1.9E-57 6.6E-62  429.3  25.7  337   61-434    19-403 (403)
 39 2jjn_A Cytochrome P450 113A1;  100.0 8.5E-57 2.9E-61  426.2  29.2  349   34-435    16-408 (411)
 40 3nc3_A Cytochrome P450 CYPX; c 100.0 1.6E-58 5.3E-63  441.1  17.4  341   61-432    53-440 (441)
 41 2zbx_A Cytochrome P450-SU1; be 100.0   8E-57 2.7E-61  426.3  28.9  352   36-430     4-406 (412)
 42 3lxh_A Cytochrome P450; heme,  100.0   3E-57   1E-61  430.6  25.5  339   61-435    38-419 (421)
 43 3buj_A CALO2; heme, iron, meta 100.0 8.1E-57 2.8E-61  424.5  27.3  332   61-433    13-396 (397)
 44 3ivy_A Cytochrome P450 CYP125; 100.0 3.3E-57 1.1E-61  431.5  24.5  356   36-434    17-429 (433)
 45 3dsk_A Cytochrome P450 74A, ch 100.0 3.7E-57 1.3E-61  440.2  24.5  369   34-410    25-472 (495)
 46 2z3t_A Cytochrome P450; monoxy 100.0 1.1E-56 3.7E-61  426.6  27.0  339   61-436    20-419 (425)
 47 4fb2_A P450CIN; heme, monooxyg 100.0 2.3E-57 7.9E-62  428.4  21.7  337   61-434    19-394 (398)
 48 1z8o_A 6-deoxyerythronolide B  100.0 4.4E-56 1.5E-60  420.3  29.9  335   61-430    14-402 (404)
 49 1s1f_A Putative cytochrome P45 100.0 1.1E-56 3.8E-61  424.5  25.4  349   37-431     8-405 (406)
 50 1q5d_A P450 epoxidase; cytochr 100.0 3.8E-56 1.3E-60  422.5  29.3  335   61-434    26-417 (419)
 51 2dkk_A Cytochrome P450; CYP158 100.0 2.7E-56 9.4E-61  421.7  27.2  336   61-434    27-411 (411)
 52 3dan_A Cytochrome P450 74A2; A 100.0 2.9E-56   1E-60  431.5  27.8  370   34-410     6-454 (473)
 53 3oft_A Cytochrome P450, CYP101 100.0 9.1E-57 3.1E-61  424.4  23.5  336   61-431    24-395 (396)
 54 2y5n_A MYCG, P-450-like protei 100.0 1.3E-55 4.3E-60  418.0  30.8  334   61-430    37-417 (417)
 55 1odo_A Putative cytochrome P45 100.0 1.5E-55   5E-60  417.3  31.0  337   61-432    15-407 (408)
 56 2xkr_A CYP142, putative cytoch 100.0 5.5E-56 1.9E-60  419.0  27.8  335   61-435    18-396 (398)
 57 3abb_A CYP105D6, cytochrome P4 100.0 1.2E-56 4.2E-61  424.7  23.0  338   61-434    24-408 (408)
 58 2uuq_A CYP130, cytochrome P450 100.0 5.8E-57   2E-61  427.0  20.4  349   48-434    12-414 (414)
 59 3rwl_A Cytochrome P450 alkane  100.0 2.9E-55   1E-59  416.7  31.9  337   61-432    38-426 (426)
 60 1gwi_A CYP154C1, cytochrome P4 100.0 4.3E-56 1.5E-60  420.9  25.2  340   61-434    17-410 (411)
 61 3mgx_A Putative P450 monooxyge 100.0 9.3E-56 3.2E-60  418.4  26.2  333   61-433    37-415 (415)
 62 2z36_A MOXA, cytochrome P450 t 100.0 5.2E-55 1.8E-59  413.5  29.5  335   61-431    22-408 (413)
 63 2xbk_A PIMD protein; epoxidati 100.0 5.9E-55   2E-59  411.4  29.5  327   61-430    26-404 (404)
 64 2wm5_A CYP124, putative cytoch 100.0 5.2E-55 1.8E-59  416.1  29.1  335   62-431    45-435 (435)
 65 3tkt_A Cytochrome P450; aromat 100.0 3.8E-55 1.3E-59  419.1  24.0  334   63-432    47-449 (450)
 66 3tyw_A Putative cytochrome P45 100.0 1.7E-54 5.9E-59  411.1  26.8  320   61-416    29-395 (417)
 67 1n40_A P450 MT2, cytochrome P4 100.0 4.9E-54 1.7E-58  405.0  26.0  329   61-430    16-396 (396)
 68 1lfk_A OXYB, P450 monooxygenas 100.0 2.3E-54 7.8E-59  407.8  22.4  327   66-430    18-398 (398)
 69 3oo3_A OXY protein; cytochrome 100.0 9.2E-54 3.1E-58  402.2  26.3  328   61-430    12-384 (384)
 70 3p3o_A Cytochrome P450; monoox 100.0 1.8E-53 6.3E-58  403.5  27.0  333   61-432    33-415 (416)
 71 2wiy_A XPLA-heme, cytochrome P 100.0 4.9E-53 1.7E-57  397.7  27.9  332   61-431    20-394 (394)
 72 1io7_A Cytochrome P450 CYP119; 100.0 6.6E-53 2.3E-57  393.6  26.8  317   63-434     1-368 (368)
 73 4dnj_A Putative cytochrome P45 100.0 3.1E-53 1.1E-57  401.0  23.1  349   43-432    18-411 (412)
 74 3b4x_A 367AA long hypothetical 100.0 2.2E-52 7.4E-57  389.6  21.2  318   63-432     1-366 (367)
 75 2rfb_A Cytochrome P450; heme,  100.0 1.5E-51 5.1E-56  380.7  18.8  314   72-428     2-342 (343)
 76 4dxy_A Cytochrome P450, CYP101 100.0 1.4E-49 4.9E-54  375.1  21.9  336   61-431    37-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.2E-45   4E-50  341.0   5.4  331   38-430    35-381 (381)
 78 3arc_T Photosystem II reaction  52.7      15 0.00051   19.4   2.7   20    1-20      1-20  (32)
 79 1m46_B IQ4, IQ4 motif from MYO  37.3      27 0.00092   16.6   2.0   13  266-278     8-20  (26)
 80 2l9u_A Receptor tyrosine-prote  34.9      54  0.0019   17.5   3.6    7   20-26     27-33  (40)
 81 2ks1_B Epidermal growth factor  27.9      91  0.0031   18.0   3.6    6   20-25     32-37  (44)
 82 4fu3_A Regulation of nuclear P  23.4 1.1E+02  0.0036   22.6   4.5   72  229-310     3-74  (135)
 83 2glz_A Similar to formylmethan  21.4      55  0.0019   25.0   2.5   21  379-399    17-37  (153)

No 1  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1e-73  Score=551.43  Aligned_cols=392  Identities=22%  Similarity=0.363  Sum_probs=338.3

Q ss_pred             CCCCCCCCCcc-cccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc-
Q 013728           34 PNPHLPPGNLG-WPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW-  111 (437)
Q Consensus        34 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~-  111 (437)
                      +..+.||+|++ +|+|||++++.+     +++.++.++++|||+ ||++++++.++|+++|++++++++.+++..+... 
T Consensus         8 ~g~~~PP~~~~~lP~iG~~~~~~~-----~~~~~~~~~~~kYG~-i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~   81 (461)
T 3ld6_A            8 AGVKSPPYIFSPIPFLGHAIAFGK-----SPIEFLENAYEKYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAED   81 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHH
T ss_pred             cCCCCCCCCCCCcCeeeeHHHhhh-----CHHHHHHHHHHHhCC-EEEEEECCccEEEEeCHHHHHHHHhCCccccCCCc
Confidence            34467888886 799999999985     799999999999999 9999999999999999999999998776555533 


Q ss_pred             -ChhhhHhhhcccc-ccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------
Q 013728          112 -WPSSVGKLFKTCL-LMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------  169 (437)
Q Consensus       112 -~~~~~~~~~g~~l-~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------  169 (437)
                       +......++|.++ +..+|+.|+++|+.+ .+.|+...++.+.+.+.+.++++++....                    
T Consensus        82 ~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  160 (461)
T 3ld6_A           82 VYSRLTTPVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASH  160 (461)
T ss_dssp             HHHHHHHHHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHH
T ss_pred             chhhhhhccCCCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHH
Confidence             2233445677765 457899999999999 88999999999999999999988874222                    


Q ss_pred             ----------------------------cccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 013728          170 ----------------------------GVMSFPVNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVV  221 (437)
Q Consensus       170 ----------------------------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~  221 (437)
                                                  ....++.+++.+.+.+..++.+.+.+++.+.+++ ++...+...|+++.|++
T Consensus       161 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~-r~~~~~~~~d~l~~ll~  239 (461)
T 3ld6_A          161 CLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQK-RRQSQEKIDDILQTLLD  239 (461)
T ss_dssp             HHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSHHHHHHT
T ss_pred             HHcCcchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCCcchhhhhHH
Confidence                                        1123455667777777888888899999999887 66544347789999998


Q ss_pred             HHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHH
Q 013728          222 IADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWN  301 (437)
Q Consensus       222 ~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a  301 (437)
                      ...+++..+|++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++++++.  ....++.+++++||||+|
T Consensus       240 ~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~~~l~~lpyl~a  317 (461)
T 3ld6_A          240 ATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE--NLPPLTYDQLKDLNLLDR  317 (461)
T ss_dssp             CBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCT--TCCCCCHHHHHTCHHHHH
T ss_pred             hhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcc--cccchhHHHHHHHhhhhh
Confidence            877777779999999999999999999999999999999999999999999999999873  345689999999999999


Q ss_pred             HHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC---CCCCcccccCCC
Q 013728          302 VASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG---ATPYSYVPFGGG  378 (437)
Q Consensus       302 ~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~---~~~~~~~~FG~G  378 (437)
                      ||+|+||++|+++...|.+.+|++++||.|||||.|+++.+.+||||++|+||++|+||||++++   ..+..|+|||+|
T Consensus       318 vi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~pFG~G  397 (461)
T 3ld6_A          318 CIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAG  397 (461)
T ss_dssp             HHHHHHHHSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSCTTCCG
T ss_pred             eeeeccccCCchhccccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCccccCCCc
Confidence            99999999999998899999999999999999999999999999999999999999999999874   456789999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCcccccccCCCCCccEEEeeccC
Q 013728          379 PRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKFGYDPMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       379 ~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r~~  435 (437)
                      +|.|+|+++|++|++++++.|+++|||+++++. +......+..+++++.|+|+||+-
T Consensus       398 ~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rss  455 (461)
T 3ld6_A          398 RHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRST  455 (461)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC-
T ss_pred             CcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECCC
Confidence            999999999999999999999999999998653 445555566677789999999974


No 2  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=7.1e-71  Score=528.74  Aligned_cols=388  Identities=34%  Similarity=0.630  Sum_probs=329.4

Q ss_pred             CCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh
Q 013728           34 PNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP  113 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~  113 (437)
                      ++.+.||||+++|++||++.+.+     +++ ++.+++++||+ +|+++++|.+.++++|++.+++|+.+++..++..+.
T Consensus         9 ~~~~~pPgp~~~P~iG~~~~~~~-----~~~-~~~~~~~~yg~-v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~   81 (444)
T 2ve3_A            9 NSLPIPPGDFGLPWLGETLNFLN-----DGD-FGKKRQQQFGP-IFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP   81 (444)
T ss_dssp             CCCCCCCCCCCBTTTBTHHHHHH-----CTT-HHHHHHHHHCS-SEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC
T ss_pred             CCCCCCCCCCCCCccccHHHHhc-----CcH-HHHHHHHHcCC-eEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh
Confidence            56688999999999999999875     567 88899999999 999998888899999999999999987655665444


Q ss_pred             hhhHhhhcc-ccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-----------------------
Q 013728          114 SSVGKLFKT-CLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-----------------------  169 (437)
Q Consensus       114 ~~~~~~~g~-~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------------------  169 (437)
                      .....++|. +++..+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....                       
T Consensus        82 ~~~~~~~g~~~l~~~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~~~f  160 (444)
T 2ve3_A           82 LSTRILLGPNALATQMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFM  160 (444)
T ss_dssp             HHHHHHHCTTSGGGCCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCccccccCCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHc
Confidence            444556676 78888999999999999 88999999999999999998888874211                       


Q ss_pred             c-------------------ccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCC
Q 013728          170 G-------------------VMSFPVNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFL  230 (437)
Q Consensus       170 ~-------------------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~l  230 (437)
                      +                   +..++..+|...+.+..++.+.+.+++.+++++ +++..+...|+++.|++..++++..+
T Consensus       161 G~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~d~l~~ll~~~~~~~~~l  239 (444)
T 2ve3_A          161 GEKVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKA-RQQQPPSEEDALGILLAARDDNNQPL  239 (444)
T ss_dssp             CHHHHSCTTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHH-HHTSCCCCSSHHHHHHHCBCTTSCBC
T ss_pred             CCCcccHHHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCccCHHHHHHhccccCCCCC
Confidence            1                   011223344444556667778888899999988 76543236789999998655445569


Q ss_pred             CHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCC
Q 013728          231 TEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLS  310 (437)
Q Consensus       231 t~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  310 (437)
                      +++++.+++.++++||+|||+++++|++++|++||++|+|+++|++.+++    ...++++++.+||||+|||+|+||++
T Consensus       240 ~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~----~~~~~~~~l~~lpyl~a~i~E~lRl~  315 (444)
T 2ve3_A          240 SLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL----SQELTAETLKKMPYLDQVLQEVLRLI  315 (444)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCC----SSCCCHHHHTTCHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcc----CCCCChhhhhcChHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999875    23789999999999999999999999


Q ss_pred             CCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCCCCCCccHH
Q 013728          311 PPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG----ATPYSYVPFGGGPRMCPGYE  386 (437)
Q Consensus       311 p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~----~~~~~~~~FG~G~~~C~G~~  386 (437)
                      |+++.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.+    ..+..++|||+|+|.|+|++
T Consensus       316 p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G~r~C~G~~  395 (444)
T 2ve3_A          316 PPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKE  395 (444)
T ss_dssp             CSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCGGGCCSCHH
T ss_pred             CCccCccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCCCccCccHH
Confidence            99998889999999999999999999999999999999999999999999999653    23456999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhCceEeeCCC-CCcccccccCCCCCccEEEeecc
Q 013728          387 FERLLILVFIHNMIKRFKWDLLIPD-EKFGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       387 ~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      +|.+|++++++.|+++|++++.++. .......+..|.++++|++++|.
T Consensus       396 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          396 FARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC-
T ss_pred             HHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeCC
Confidence            9999999999999999999987442 23344557789999999999983


No 3  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=5e-71  Score=536.05  Aligned_cols=392  Identities=20%  Similarity=0.251  Sum_probs=295.4

Q ss_pred             CCCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC
Q 013728           33 YPNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW  112 (437)
Q Consensus        33 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~  112 (437)
                      .+++++||||++||++||++++..    ++++..+.+|+++||+ ||++++|+.++|+|+||+++++|+.+++..|..+.
T Consensus         6 ss~~kLPPGP~~lP~iGn~~~~~~----~~~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~   80 (479)
T 3tbg_A            6 SSKGKLPPGPLPLPGLGNLLHVDF----QNTPYCFDQLRRRFGD-VFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP   80 (479)
T ss_dssp             ---CCCCCCSCCBTTTBTGGGCCT----TSHHHHHHHHHHHHCS-EEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCC
T ss_pred             CCCCCCCCCCCCcCcccchHhhcC----CCHHHHHHHHHHHhCC-EEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCC
Confidence            356689999999999999998875    6899999999999999 99999999999999999999999988776666543


Q ss_pred             hhhhHhhh-----cccc-ccccChHHHHHHHhhhhccCCHHH-----HHHHHHHHHHHHHHHHHHhhc------------
Q 013728          113 PSSVGKLF-----KTCL-LMKAGDDAKRMRRMMMMSFLSPNA-----LMKYVERIDMITQQHIATYWE------------  169 (437)
Q Consensus       113 ~~~~~~~~-----g~~l-~~~~g~~~~~~R~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~~~~~------------  169 (437)
                      .......+     +.++ +..+|+.|+++|+.+ .+.|+...     +..+...........+.....            
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  159 (479)
T 3tbg_A           81 PVPITQILGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKA  159 (479)
T ss_dssp             CCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHH
T ss_pred             chHHHHHhccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHH
Confidence            33332222     2244 446799999999998 55554433     222222222222222211000            


Q ss_pred             -----------------------------------------cccccCccCCC-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013728          170 -----------------------------------------GVMSFPVNFPG-TTFYKSIRAADAIREELIKLIAKQTRE  207 (437)
Q Consensus       170 -----------------------------------------~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~  207 (437)
                                                               .+...+..... ....+.....+.....+.+.+.. ...
T Consensus       160 ~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  238 (479)
T 3tbg_A          160 VSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTE-HRM  238 (479)
T ss_dssp             HHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHH-HHH
T ss_pred             HHHHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence                                                     00001111111 11123334455566666666665 443


Q ss_pred             hcC--C-chhHHHHHHHHH----hhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhh
Q 013728          208 ALG--S-KQDLLSRLVVIA----DSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAE  280 (437)
Q Consensus       208 ~~~--~-~~~~l~~ll~~~----~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~  280 (437)
                      ..+  . ..+.++.+....    .+.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+.+++
T Consensus       239 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~  318 (479)
T 3tbg_A          239 TWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG  318 (479)
T ss_dssp             HCCTTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred             hhhcccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHh
Confidence            322  1 455555554442    233456999999999999999999999999999999999999999999999999875


Q ss_pred             hcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcc-cccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCC
Q 013728          281 SKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIG-AFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDA  359 (437)
Q Consensus       281 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  359 (437)
                         .++.++.+++++||||+|||+|+||++|+++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|
T Consensus       319 ---~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~P  395 (479)
T 3tbg_A          319 ---QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHP  395 (479)
T ss_dssp             ---SSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCG
T ss_pred             ---hccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCc
Confidence               46788999999999999999999999999995 55678899999999999999999999999999999999999999


Q ss_pred             CCCCCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCCcccc----cccCCCCCccEEEee
Q 013728          360 SRFEREG---ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEKFGYD----PMLSPSQGLPIRLQP  432 (437)
Q Consensus       360 ~R~l~~~---~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~  432 (437)
                      |||++++   ..+..|+|||+|+|.|+|++||++|++++++.|+++|||+++++.+.....    .+..| .+++|+++|
T Consensus       396 eRfl~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P-~~~~v~~~p  474 (479)
T 3tbg_A          396 EHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSP-SPYELCAVP  474 (479)
T ss_dssp             GGGBCTTCCBCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEE-CCCCBEEEE
T ss_pred             cccCCCCcccCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecC-CCeEEEEEE
Confidence            9999764   456789999999999999999999999999999999999997654333222    24445 579999999


Q ss_pred             ccC
Q 013728          433 HQC  435 (437)
Q Consensus       433 r~~  435 (437)
                      |+-
T Consensus       475 Rs~  477 (479)
T 3tbg_A          475 RHH  477 (479)
T ss_dssp             C--
T ss_pred             CCC
Confidence            973


No 4  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1e-69  Score=527.17  Aligned_cols=391  Identities=20%  Similarity=0.293  Sum_probs=316.5

Q ss_pred             CCCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC
Q 013728           33 YPNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW  112 (437)
Q Consensus        33 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~  112 (437)
                      .++.+.+|||+++|++||++.+......++++.++.+|+++||+ ||++++|+.++|+++||+++++|+.+++.+.+...
T Consensus        20 ~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~r~~   98 (482)
T 3k9v_A           20 TRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQ-IFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLE   98 (482)
T ss_dssp             CEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTCCSSCCCCC
T ss_pred             cCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCC-EEEEccCCCCEEEEcCHHHHHHHHHhcCCCCCCCC
Confidence            35678899999999999999986532224689999999999999 99999999999999999999999987543322222


Q ss_pred             hhh---hHhh--hccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhh----------c--------
Q 013728          113 PSS---VGKL--FKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYW----------E--------  169 (437)
Q Consensus       113 ~~~---~~~~--~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~--------  169 (437)
                      ...   ....  .+.+++..+|+.|+++|+.++..++++..++.+.+.+.+.++++++...          +        
T Consensus        99 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~  178 (482)
T 3k9v_A           99 IKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKW  178 (482)
T ss_dssp             CHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHH
T ss_pred             chHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            111   1222  2447888899999999999944456888888888888888887775321          0        


Q ss_pred             -------cccccC-----------------------------ccCC--------ChhhHHHHHHHHHHHHHHHHHHHHHH
Q 013728          170 -------GVMSFP-----------------------------VNFP--------GTTFYKSIRAADAIREELIKLIAKQT  205 (437)
Q Consensus       170 -------~~~~~~-----------------------------~~~p--------~~~~~~~~~~~~~~~~~~~~~i~~~~  205 (437)
                             ..++..                             ..+|        ...+++..+..+.+.+.+.+.+++ +
T Consensus       179 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-r  257 (482)
T 3k9v_A          179 SFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDN-R  257 (482)
T ss_dssp             HHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence                   000000                             0011        112233445556677777778877 6


Q ss_pred             HHhcC-C-chhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcc
Q 013728          206 REALG-S-KQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKE  283 (437)
Q Consensus       206 ~~~~~-~-~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~  283 (437)
                      .+... . ..|++..++...     .++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++   
T Consensus       258 ~~~~~~~~~~d~l~~ll~~~-----~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~---  329 (482)
T 3k9v_A          258 LQRYSQQPGADFLCDIYQQD-----HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLP---  329 (482)
T ss_dssp             HHHTTTCTTSCHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC---
T ss_pred             HHHhccCCchHHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---
Confidence            54332 2 567777777642     3899999999999999999999999999999999999999999999999986   


Q ss_pred             cCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCC
Q 013728          284 QGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFE  363 (437)
Q Consensus       284 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  363 (437)
                      .++.++++++.+||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       330 ~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl  409 (482)
T 3k9v_A          330 DNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWL  409 (482)
T ss_dssp             TTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGGT
T ss_pred             CCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCccccC
Confidence            34578999999999999999999999999998899999999999999999999999999999999999999999999999


Q ss_pred             CCC--CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCcccccccCCCCCccEEEeec
Q 013728          364 REG--ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKFGYDPMLSPSQGLPIRLQPH  433 (437)
Q Consensus       364 ~~~--~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r  433 (437)
                      +.+  ..+..++|||.|+|.|+|+++|.+|++++++.|+++|++++.++. .+.....+..|+.+++|++++|
T Consensus       410 ~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          410 QKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             CTTSCCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred             CCCCCCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCcceEEeeC
Confidence            764  356789999999999999999999999999999999999987543 2334455788999999999997


No 5  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=1.6e-69  Score=526.14  Aligned_cols=388  Identities=19%  Similarity=0.332  Sum_probs=311.3

Q ss_pred             CCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhccccc-ccceeccChhh
Q 013728           37 HLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNE-NKLVRTWWPSS  115 (437)
Q Consensus        37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~-~~~~~~~~~~~  115 (437)
                      ..||||+++|++||++++.+     +++.++.+|+++||+ ||++++++.++|+++||+.+++++.++ ...+..+....
T Consensus        14 ~~~PGP~~~PliGn~~~~~~-----~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~   87 (485)
T 3nxu_A           14 LGIPGPTPLPFLGNILSYHK-----GFCMFDMECHKKYGK-VWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFG   87 (485)
T ss_dssp             HTCCCCCCBTTTBTGGGGGG-----CHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCS
T ss_pred             CCCCCCCCcCeecCcHHhhc-----ChHHHHHHHHHHcCC-eEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccc
Confidence            35799999999999999874     789999999999999 999999999999999999999999876 33444332222


Q ss_pred             hHhhhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc------------------------cc
Q 013728          116 VGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE------------------------GV  171 (437)
Q Consensus       116 ~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------------~~  171 (437)
                      ....++.+++..+|+.|+++|+++ .+.|++.+++.+.+.+.+.++++++....                        ..
T Consensus        88 ~~~~~~~~l~~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~  166 (485)
T 3nxu_A           88 PVGFMKSAISIAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTS  166 (485)
T ss_dssp             CCGGGGGSTTTCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCccccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHH
Confidence            223456688889999999999999 88899999999999999988888764311                        00


Q ss_pred             cccCc-------------------------------cCCChh--hHH------HHHHHHHHHHHHHHHHHHHHHHhcCC-
Q 013728          172 MSFPV-------------------------------NFPGTT--FYK------SIRAADAIREELIKLIAKQTREALGS-  211 (437)
Q Consensus       172 ~~~~~-------------------------------~~p~~~--~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~-  211 (437)
                      ++...                               .+|...  ...      .....+.+.+.+.+.++. +.+.... 
T Consensus       167 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  245 (485)
T 3nxu_A          167 FGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKES-RLEDTQKH  245 (485)
T ss_dssp             HSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHH-HHHCC---
T ss_pred             cCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHH-HHhccCCC
Confidence            00000                               011000  000      012333444455555544 4332223 


Q ss_pred             chhHHHHHHHHHhhc----CCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCC
Q 013728          212 KQDLLSRLVVIADSN----GKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGEL  287 (437)
Q Consensus       212 ~~~~l~~ll~~~~~~----~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~  287 (437)
                      ..|+++.+++...+.    +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++   ..+.
T Consensus       246 ~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~~~  322 (485)
T 3nxu_A          246 RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP---NKAP  322 (485)
T ss_dssp             CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST---TTCC
T ss_pred             cccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhc---cCCC
Confidence            678999999875422    345999999999999999999999999999999999999999999999999986   3467


Q ss_pred             CCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC-
Q 013728          288 LKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG-  366 (437)
Q Consensus       288 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~-  366 (437)
                      ++++++.+||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.+ 
T Consensus       323 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~  402 (485)
T 3nxu_A          323 PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK  402 (485)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHH
T ss_pred             CCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCcc
Confidence            8999999999999999999999999998899999999999999999999999999999999999999999999999652 


Q ss_pred             --CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCC-Cc--ccccccCCCCCccEEEeeccC
Q 013728          367 --ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDE-KF--GYDPMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       367 --~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~--~~~~~~~~~~~~~v~~~~r~~  435 (437)
                        ..+..++|||.|+|.|+|+++|.+|++++++.|+++|++++.++.. ..  ....+..|+.+++|++++|+-
T Consensus       403 ~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~  476 (485)
T 3nxu_A          403 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDG  476 (485)
T ss_dssp             TTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC--
T ss_pred             ccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEccC
Confidence              3567799999999999999999999999999999999999875432 22  233467888999999999964


No 6  
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=3.3e-68  Score=513.35  Aligned_cols=386  Identities=22%  Similarity=0.355  Sum_probs=325.3

Q ss_pred             CCCCCCCC-CcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc-
Q 013728           34 PNPHLPPG-NLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW-  111 (437)
Q Consensus        34 ~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~-  111 (437)
                      ++.+.||| |+++|++||++++.+     +++.++.+|+++||+ ||++++++.+++++++++.+++++.++...+... 
T Consensus         8 ~~~~~PPg~P~~lP~iG~l~~~~~-----~~~~~~~~~~~~yG~-v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~   81 (461)
T 3i3k_A            8 AGVKSPPYIFSPIPFLGHAIAFGK-----SPIEFLENAYEKYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAED   81 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHH
T ss_pred             CCCCCCCCCCCCCCccccHHhhcc-----CHHHHHHHHHHHhCC-EEEEEecCceEEEEeChHHHHHHHhccccccccch
Confidence            45678999 889999999999984     799999999999999 9999999999999999999999998766545432 


Q ss_pred             -ChhhhHhhhcccccc-ccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------
Q 013728          112 -WPSSVGKLFKTCLLM-KAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------  169 (437)
Q Consensus       112 -~~~~~~~~~g~~l~~-~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------  169 (437)
                       +......++|.++.. .+|+.|+++|+++ .+.|++..++.+.+.+.++++++++....                    
T Consensus        82 ~~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~~  160 (461)
T 3i3k_A           82 VYSRLTTPVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASH  160 (461)
T ss_dssp             HHHHHHHHHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhhcCCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHH
Confidence             222334567777655 4799999999999 88899999999999999999888874221                    


Q ss_pred             ----------------------------cccccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 013728          170 ----------------------------GVMSFPVNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVV  221 (437)
Q Consensus       170 ----------------------------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~  221 (437)
                                                  ....+|.+++...+++..++.+.+.+++.+.+++ +++..+...|+++.+++
T Consensus       161 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~d~l~~ll~  239 (461)
T 3i3k_A          161 CLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQK-RRQSQEKIDDILQTLLD  239 (461)
T ss_dssp             HHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCCCCSHHHHHHT
T ss_pred             HHccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccccHHHHHHH
Confidence                                        0112445566666677777888888899988887 66543336789999998


Q ss_pred             HHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHH
Q 013728          222 IADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWN  301 (437)
Q Consensus       222 ~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a  301 (437)
                      ...+++..++++++.+.++++++||+|||+++++|++++|++||++|+|+++||+++++.  ....++.+++++||||+|
T Consensus       240 ~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~--~~~~~~~~~~~~l~~l~a  317 (461)
T 3i3k_A          240 ATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE--NLPPLTYDQLKDLNLLDR  317 (461)
T ss_dssp             CBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCT--TCCCCCHHHHHTCHHHHH
T ss_pred             hhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC--CCCCCCHHHHhcChHHHH
Confidence            766666669999999999999999999999999999999999999999999999999873  234579999999999999


Q ss_pred             HHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC---CCCCcccccCCC
Q 013728          302 VASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG---ATPYSYVPFGGG  378 (437)
Q Consensus       302 ~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~---~~~~~~~~FG~G  378 (437)
                      ||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++.+   .....++|||+|
T Consensus       318 ~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G  397 (461)
T 3i3k_A          318 CIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAG  397 (461)
T ss_dssp             HHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHHHSSSSSCTTCCG
T ss_pred             HHHHHHhcCCCccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCCCCCcceeCCCCC
Confidence            99999999999988899999999999999999999999999999999999999999999999764   346789999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCccccc-ccCCCCCccEE
Q 013728          379 PRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKFGYDP-MLSPSQGLPIR  429 (437)
Q Consensus       379 ~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~-~~~~~~~~~v~  429 (437)
                      +|.|||+++|.+|++++++.|+++||+++.++. +.+.... +..|.+++.++
T Consensus       398 ~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          398 RHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY  450 (461)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence            999999999999999999999999999997653 3344333 55677655443


No 7  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=5.4e-68  Score=517.75  Aligned_cols=387  Identities=21%  Similarity=0.302  Sum_probs=312.5

Q ss_pred             CCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChh
Q 013728           35 NPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPS  114 (437)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~  114 (437)
                      +.+.||||+++|++||++++.+... .+.+..+.+|+++||+ ||++++++.++|+++|++.++++++++.  +..+...
T Consensus        43 ~~~~pPGP~~~P~iGnl~~~~~~~~-~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~p~~~~~il~~~~--~~~r~~~  118 (503)
T 3s79_A           43 GTSSIPGPGYCMGIGPLISHGRFLW-MGIGSACNYYNRVYGE-FMRVWISGEETLIISKSSSMFHIMKHNH--YSSRFGS  118 (503)
T ss_dssp             --CCCCSCCCCSSSHHHHHHHHHHH-HCHHHHHHHHHHHSCS-EEEEESSSSEEEEECCHHHHHHHHHSGG--GCCCCCC
T ss_pred             ccCCCCCCCCCceeeehhccccccc-cchhHHHHHHHHHhCC-eEEEEeCCccEEEECCHHHHHHHHhcCC--CCCcchh
Confidence            3478999999999999999864211 2456789999999999 9999999999999999999999997543  3333221


Q ss_pred             -hhHh---hhcccc-ccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------
Q 013728          115 -SVGK---LFKTCL-LMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------  169 (437)
Q Consensus       115 -~~~~---~~g~~l-~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------  169 (437)
                       ....   ..|.++ +..+|+.|+++|+.+ .+.|+..+++.+.+.+.+.++++++....                    
T Consensus       119 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~  197 (503)
T 3s79_A          119 KLGLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLD  197 (503)
T ss_dssp             HHHHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHH
T ss_pred             hhhhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHH
Confidence             1112   223455 456799999999999 88899999999999999999888863211                    


Q ss_pred             ----cccccCc---------------------------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C-c
Q 013728          170 ----GVMSFPV---------------------------NFPGTTFYKSIRAADAIREELIKLIAKQTREALG-----S-K  212 (437)
Q Consensus       170 ----~~~~~~~---------------------------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~-~  212 (437)
                          .+++.+.                           .++ ...++..++.+.+.+.+.+.+++ +++..+     . .
T Consensus       198 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~  275 (503)
T 3s79_A          198 TSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKIS-WLYKKYEKSVKDLKDAIEVLIAE-KRRRISTEEKLEEC  275 (503)
T ss_dssp             HHHHHHTCCCCCHHHHHHHHHHHHHHHHHHTTCCHHHHHSG-GGTHHHHHHHHHHHHHHHHHHHH-HHHHHHTCTTTTTT
T ss_pred             HHHHHHcCcccCchhHHHHHHHHHHHHHHHhcCcHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHH-HHHHhhcccccchH
Confidence                0011100                           011 12345566778888888888887 554321     1 3


Q ss_pred             hhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHH
Q 013728          213 QDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWED  292 (437)
Q Consensus       213 ~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~  292 (437)
                      .|+++.+++..++.  .++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++    ++.+++++
T Consensus       276 ~d~l~~ll~~~~~~--~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~----~~~~~~~~  349 (503)
T 3s79_A          276 MDFATELILAEKRG--DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG----ERDIKIDD  349 (503)
T ss_dssp             CCHHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT----TSCCCHHH
T ss_pred             HHHHHHHHHhcccC--CCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CCCCCHHH
Confidence            48999999876443  4999999999999999999999999999999999999999999999999986    46799999


Q ss_pred             hhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 013728          293 IQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSY  372 (437)
Q Consensus       293 l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~  372 (437)
                      +++||||+|||+|+||++|+++.+.|.+.+|++++||.|||||.|.++.+++||| ++|+||++|+||||++. .....+
T Consensus       350 ~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~-~~~~~~  427 (503)
T 3s79_A          350 IQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKN-VPYRYF  427 (503)
T ss_dssp             HTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSC-CCTTTC
T ss_pred             HhcCHHHHHHHHhhhccCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCC-CCcccc
Confidence            9999999999999999999999888999999999999999999999999999998 99999999999999975 345679


Q ss_pred             cccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCC--Cc--ccccccCCCCC---ccEEEeeccCC
Q 013728          373 VPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDE--KF--GYDPMLSPSQG---LPIRLQPHQCS  436 (437)
Q Consensus       373 ~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~---~~v~~~~r~~~  436 (437)
                      +|||+|+|.|+|+++|.+|++++++.|+++|++++.++..  ..  ..+.+..|..+   ++|+++||+.+
T Consensus       428 ~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~~~  498 (503)
T 3s79_A          428 QPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNSD  498 (503)
T ss_dssp             CSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC--
T ss_pred             cCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCCch
Confidence            9999999999999999999999999999999999975432  22  22345566554   99999999753


No 8  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=4.7e-68  Score=514.67  Aligned_cols=391  Identities=20%  Similarity=0.309  Sum_probs=308.9

Q ss_pred             CCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc-C
Q 013728           34 PNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW-W  112 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~-~  112 (437)
                      ++.++||||+++|++||++++..    .+++.++.+|+++||+ ||++++++.++++++|++.+++|+.++...+..+ .
T Consensus         7 ~~~~lpPgP~~~PliG~~~~~~~----~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~   81 (476)
T 3e6i_A            7 SKGKLPPGPFPLPIIGNLFQLEL----KNIPKSFTRLAQRFGP-VFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGD   81 (476)
T ss_dssp             ---CCCCCCCCBTTTBTGGGCCT----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECC
T ss_pred             CCCCCCcCCCCcccccChhhhcc----ccHhHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCC
Confidence            45689999999999999998843    6899999999999999 9999999999999999999999998765445433 2


Q ss_pred             hhhhHhhhccccccccChHHHHHHHhhhhccCCHHHH--HHHHHHHHHHHHHHHHHhhc---------------------
Q 013728          113 PSSVGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNAL--MKYVERIDMITQQHIATYWE---------------------  169 (437)
Q Consensus       113 ~~~~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~---------------------  169 (437)
                      ......+.+.+++..+|+.|+++|+.. .+.|+...+  ..+.+.+.+.++.+++....                     
T Consensus        82 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~  160 (476)
T 3e6i_A           82 LPAFHAHRDRGIIFNNGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIA  160 (476)
T ss_dssp             CGGGGGGTTSSSTTCCSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHH
T ss_pred             CchhheecCCCEEecCCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHH
Confidence            233344444478888999999999977 554443222  22345555555555542110                     


Q ss_pred             -ccc----------------------------------ccC---ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 013728          170 -GVM----------------------------------SFP---VNFPGTTFYKSIRAADAIREELIKLIAKQTREALGS  211 (437)
Q Consensus       170 -~~~----------------------------------~~~---~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  211 (437)
                       .++                                  .+|   .++|. ..++..+..+.+.+++.+.+++ +++..+.
T Consensus       161 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~  238 (476)
T 3e6i_A          161 DILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPG-SHRKVIKNVAEVKEYVSERVKE-HHQSLDP  238 (476)
T ss_dssp             HHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHH-HHHTCCT
T ss_pred             HHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHH-HhhcCCC
Confidence             000                                  011   12222 2345566677788888888887 6654332


Q ss_pred             --chhHHHHHHHHHhhc----CCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccC
Q 013728          212 --KQDLLSRLVVIADSN----GKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQG  285 (437)
Q Consensus       212 --~~~~l~~ll~~~~~~----~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~  285 (437)
                        ..|+++.++....+.    +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++   .+
T Consensus       239 ~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~---~~  315 (476)
T 3e6i_A          239 NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIG---PS  315 (476)
T ss_dssp             TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT---TT
T ss_pred             CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcC---CC
Confidence              568999998765432    235899999999999999999999999999999999999999999999999986   34


Q ss_pred             CCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCC
Q 013728          286 ELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFER  364 (437)
Q Consensus       286 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  364 (437)
                      ..++++++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++
T Consensus       316 ~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~  395 (476)
T 3e6i_A          316 RIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLN  395 (476)
T ss_dssp             SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBC
T ss_pred             CCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcC
Confidence            67899999999999999999999999999 58899999999999999999999999999999999999999999999997


Q ss_pred             CC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCCcccc----cccCCCCCccEEEeeccC
Q 013728          365 EG---ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEKFGYD----PMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       365 ~~---~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~r~~  435 (437)
                      .+   .....++|||+|+|.|+|+++|.+|++++++.|+++|++++..+...+...    .....+.+++|+|+||+-
T Consensus       396 ~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R~~  473 (476)
T 3e6i_A          396 ENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPRSH  473 (476)
T ss_dssp             TTSSBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEECCCCCEEEEECC-
T ss_pred             CCCCccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCCCCeEEEEEeccc
Confidence            64   356789999999999999999999999999999999999985333333222    123344679999999963


No 9  
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=7.4e-68  Score=509.42  Aligned_cols=386  Identities=18%  Similarity=0.302  Sum_probs=300.4

Q ss_pred             CCCCC-CcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc-Chh
Q 013728           37 HLPPG-NLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW-WPS  114 (437)
Q Consensus        37 ~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~-~~~  114 (437)
                      +.||| |+++|++||++.+.     .+++.++.+++++||+ ||++++++.++++++|++.+++++.+++..+... ...
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~-----~~~~~~~~~l~~~yG~-v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~   77 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFR-----TDPIGLMQRVRDELGD-VGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYP   77 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHT-----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCG
T ss_pred             CCCCCCCCCCCCccCHHHHh-----hChHHHHHHHHHHcCC-EEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchh
Confidence            57898 77899999999886     4799999999999999 9999999889999999999999997654444432 222


Q ss_pred             hhHhhhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------------------------
Q 013728          115 SVGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------------------------  169 (437)
Q Consensus       115 ~~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------------  169 (437)
                      ....++|.+++ .+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....                         
T Consensus        78 ~~~~~~g~~~~-~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~  155 (455)
T 2cib_A           78 FMTPIFGEGVV-FDASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGK  155 (455)
T ss_dssp             GGHHHHC----------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHhhcCCccc-cCcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCC
Confidence            33344565553 5899999999999 89999999999999999999998873211                         


Q ss_pred             -------------------ccc----ccCccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ch-hHHHHHHHHH
Q 013728          170 -------------------GVM----SFPVNFPGTTFYKSIRAADAIREELIKLIAKQTREALGS--KQ-DLLSRLVVIA  223 (437)
Q Consensus       170 -------------------~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~-~~l~~ll~~~  223 (437)
                                         .+.    .+| +++.+.+++..++...+.+++.+.+++ +++..+.  .. |+++.|++..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~~~~dll~~ll~~~  233 (455)
T 2cib_A          156 KFRDQLDGRFAKLYHELERGTDPLAYVDP-YLPIESFRRRDEARNGLVALVADIMNG-RIANPPTDKSDRDMLDVLIAVK  233 (455)
T ss_dssp             HHHTTCCHHHHHHHHHHHTTCCGGGGTCT-TCSCHHHHHHHHHHHHHHHHHHHHHHH-HHHCC-----CCCHHHHHHHCB
T ss_pred             CcchhhhHHHHHHHHHHHhhhhHHHHhcc-cCCChhHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCcccHHHHHHHhh
Confidence                               000    011 223333445566777888888888888 6654322  23 8999999865


Q ss_pred             hhcCCC-CCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHH
Q 013728          224 DSNGKF-LTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNV  302 (437)
Q Consensus       224 ~~~~~~-lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~  302 (437)
                      ++++.. ++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++.   +..++++++++||||+||
T Consensus       234 ~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lpyl~a~  310 (455)
T 2cib_A          234 AETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD---GRSVSFHALRQIPQLENV  310 (455)
T ss_dssp             CTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGG---CCCHHHHTTSCCHHHHHH
T ss_pred             hhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---CCCCCHHHHhcCHHHHHH
Confidence            444555 9999999999999999999999999999999999999999999999999862   356889999999999999


Q ss_pred             HHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCC----CCCcccccCCC
Q 013728          303 ASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGA----TPYSYVPFGGG  378 (437)
Q Consensus       303 i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~----~~~~~~~FG~G  378 (437)
                      |+|+||++|+++.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.+.    .+..++|||+|
T Consensus       311 i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G  390 (455)
T 2cib_A          311 LKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAG  390 (455)
T ss_dssp             HHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCG
T ss_pred             HHHHHhcCCcccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCCCC
Confidence            99999999999888999999999999999999999999999999999999999999999996532    25679999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCCcc---cccccCCCCCccEEEeeccC
Q 013728          379 PRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEKFG---YDPMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       379 ~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~r~~  435 (437)
                      +|.|+|+++|.+|++++++.|+++|++++.++...+.   ...+..|..+++|++++|+.
T Consensus       391 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R~~  450 (455)
T 2cib_A          391 RHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTG  450 (455)
T ss_dssp             GGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC--
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEECcc
Confidence            9999999999999999999999999999864333331   22355677799999999964


No 10 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=3.6e-68  Score=517.63  Aligned_cols=391  Identities=18%  Similarity=0.233  Sum_probs=306.5

Q ss_pred             CCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChh
Q 013728           35 NPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPS  114 (437)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~  114 (437)
                      ..+.||||+++|++||++++.+.   ++++..+.+|+++||+ ||++++|+.++|+++|++.+++++.+++..|..+...
T Consensus         6 ~~~~PPgP~~lPliGnl~~l~~~---~~~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~   81 (494)
T 3swz_A            6 GAKYPKSLLSLPLVGSLPFLPRH---GHMHNNFFKLQKKYGP-IYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQM   81 (494)
T ss_dssp             ------CCBCCCEEEEESSCTTS---SCHHHHHHHTHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCC
T ss_pred             CCCCCCCCCCCCeEcchHHhCCC---CchhHHHHHHHHHcCC-EEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence            45789999999999999987641   4689999999999999 9999999999999999999999998877666654333


Q ss_pred             hhHhhh---ccccccc-cChHHHHHHHhhhhccCCH--HHHHHHHHHHHHHHHHHHHHhhc-------------------
Q 013728          115 SVGKLF---KTCLLMK-AGDDAKRMRRMMMMSFLSP--NALMKYVERIDMITQQHIATYWE-------------------  169 (437)
Q Consensus       115 ~~~~~~---g~~l~~~-~g~~~~~~R~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~-------------------  169 (437)
                      .....+   +.++++. +|+.|+++|+++ .+.|+.  ..+..+.+.+.+.++.+++....                   
T Consensus        82 ~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dv  160 (494)
T 3swz_A           82 ATLDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNV  160 (494)
T ss_dssp             HHHHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHH
T ss_pred             HHHHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHH
Confidence            333333   2366555 599999999999 776653  33444566666666655542110                   


Q ss_pred             -----------------------------------cccccCc--cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Q 013728          170 -----------------------------------GVMSFPV--NFPGTTFYKSIRAADAIREELIKLIAKQTREALGS-  211 (437)
Q Consensus       170 -----------------------------------~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-  211 (437)
                                                         ....+|+  ++|....++..+..+.+.+++.+.+++ +++.... 
T Consensus       161 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~  239 (494)
T 3swz_A          161 ISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILEN-YKEKFRSD  239 (494)
T ss_dssp             HHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHH-HTTTCCTT
T ss_pred             HHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH-HHHhhccc
Confidence                                               0001222  234333445556666777777777776 5543322 


Q ss_pred             -chhHHHHHHHHHhh----------cCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhh
Q 013728          212 -KQDLLSRLVVIADS----------NGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAE  280 (437)
Q Consensus       212 -~~~~l~~ll~~~~~----------~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~  280 (437)
                       ..|+++.+++...+          .+..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++||+++++
T Consensus       240 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  319 (494)
T 3swz_A          240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG  319 (494)
T ss_dssp             CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred             chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence             56899999986532          1224899999999999999999999999999999999999999999999999986


Q ss_pred             hcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcc-cccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCC
Q 013728          281 SKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIG-AFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDA  359 (437)
Q Consensus       281 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  359 (437)
                         .++.++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|
T Consensus       320 ---~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P  396 (494)
T 3swz_A          320 ---FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMP  396 (494)
T ss_dssp             ---SSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCG
T ss_pred             ---CCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCc
Confidence               35678999999999999999999999999995 78999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC-----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCCcccc--c-ccCCCCCccEEEe
Q 013728          360 SRFEREG-----ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEKFGYD--P-MLSPSQGLPIRLQ  431 (437)
Q Consensus       360 ~R~l~~~-----~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~--~-~~~~~~~~~v~~~  431 (437)
                      |||++.+     .....++|||+|+|.|+|+++|.+|++++++.|+++|+|++.++.......  . ....+.+++|+++
T Consensus       397 eRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~  476 (494)
T 3swz_A          397 ERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIK  476 (494)
T ss_dssp             GGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEECCCCCEEEE
T ss_pred             ccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecCCCcEEEEE
Confidence            9999763     245679999999999999999999999999999999999987543222221  1 3334577999999


Q ss_pred             ecc
Q 013728          432 PHQ  434 (437)
Q Consensus       432 ~r~  434 (437)
                      +|+
T Consensus       477 ~R~  479 (494)
T 3swz_A          477 VRQ  479 (494)
T ss_dssp             ECH
T ss_pred             EcC
Confidence            994


No 11 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=2.7e-67  Score=505.78  Aligned_cols=382  Identities=21%  Similarity=0.355  Sum_probs=322.8

Q ss_pred             CCCCCCCcc-cccccchHHHHhhccCCCchHHHHHHHHhhC-CceEEEeeCCCcEEEEeCcchhhhcccccccceeccC-
Q 013728           36 PHLPPGNLG-WPVIGETLGFIRAGFEGKPERFIRERMEKYD-SRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW-  112 (437)
Q Consensus        36 ~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~-  112 (437)
                      .++||||++ +|++||++++.+     +++.++.+|+++|| + +|++++++.++++++||+.+++++.+++..+..+. 
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~~-i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~   75 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGK-----SPLGFMQECKRQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREV   75 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHH-----CHHHHHHHHHHHHTCS-EEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGG
T ss_pred             CCCCCCCCCCcchhccHHHHcc-----CHHHHHHHHHHHhCCC-eEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhh
Confidence            468999776 899999999974     79999999999999 8 99999999999999999999999988766666443 


Q ss_pred             hhhhHhhhcccccc-ccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc----------------------
Q 013728          113 PSSVGKLFKTCLLM-KAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE----------------------  169 (437)
Q Consensus       113 ~~~~~~~~g~~l~~-~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------------  169 (437)
                      ......++|.++.. .+|+.|+++|+.+ .+.|++.+++.+.+.+.+++++++++.+.                      
T Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~  154 (450)
T 3gw9_A           76 YSFMVPVFGEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQ  154 (450)
T ss_dssp             GGGGHHHHCTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHH
Confidence            23344567776644 5899999999999 88899999999999999999988873332                      


Q ss_pred             -------------------------c----ccccCc--cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-chh
Q 013728          170 -------------------------G----VMSFPV--NFPGTTFYKSIRAADAIREELIKLIAKQTREAL---GS-KQD  214 (437)
Q Consensus       170 -------------------------~----~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~-~~~  214 (437)
                                               .    ...+|+  ++|.+..++..++.+.+.+++.+.+++ +++..   +. ..|
T Consensus       155 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~~~~~d  233 (450)
T 3gw9_A          155 CLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIA-RKEEEVNKDSSTSD  233 (450)
T ss_dssp             HHSCHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTSCCCCS
T ss_pred             HHcCcchhhhhhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHH-HHHhhcccCCccch
Confidence                                     0    011221  344444556677788888999998887 65432   12 689


Q ss_pred             HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHc--cCcHHHHHHHHHHHHhhhhcccCCCCCHHH
Q 013728          215 LLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLG--QMPQVFENVLREQIGIAESKEQGELLKWED  292 (437)
Q Consensus       215 ~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~--~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~  292 (437)
                      +++.+++...+++..++++++.++++.+++||+|||+++++|++++|+  .||++|+|+++|++++      ...++.++
T Consensus       234 ~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~------~~~~~~~~  307 (450)
T 3gw9_A          234 LLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF------PAQLNYNN  307 (450)
T ss_dssp             HHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC------CSSCCHHH
T ss_pred             HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc------cCCCChHH
Confidence            999999876555666999999999999999999999999999999999  9999999999999987      35689999


Q ss_pred             h-hcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 013728          293 I-QKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYS  371 (437)
Q Consensus       293 l-~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~  371 (437)
                      + ++||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||+.   ..+..
T Consensus       308 ~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~---~~~~~  384 (450)
T 3gw9_A          308 VMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE---KVEGA  384 (450)
T ss_dssp             HHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC---SSTTC
T ss_pred             HHHhcHHHHHHHHHHHHhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc---CCCCc
Confidence            9 9999999999999999999998889999999999999999999999999999999999999999999932   23678


Q ss_pred             ccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCccc-ccccCCC-CCccEEEeecc
Q 013728          372 YVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKFGY-DPMLSPS-QGLPIRLQPHQ  434 (437)
Q Consensus       372 ~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~-~~~~~~~-~~~~v~~~~r~  434 (437)
                      ++|||+|+|.|+|+++|.+|++++++.|+++||+++.+++ +...+ ..+..|+ .++.|++++|+
T Consensus       385 ~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          385 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             CCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEECC
T ss_pred             eeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeeecC
Confidence            9999999999999999999999999999999999997432 33333 3456677 79999999995


No 12 
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=2.2e-67  Score=509.36  Aligned_cols=386  Identities=20%  Similarity=0.306  Sum_probs=311.1

Q ss_pred             CCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc-Chhh
Q 013728           37 HLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW-WPSS  115 (437)
Q Consensus        37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~-~~~~  115 (437)
                      +.||||+++|++||++.+..    ++++.++.+|+++||+ ||++++++.++++++|++.+++|+.++...|..+ ....
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~-v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~   84 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLNT----EQMYNSLMKISERYGP-VFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQAT   84 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCCT----TBHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHH
T ss_pred             CCCCCCCCCcccccHhhcCC----cchHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHH
Confidence            68999999999999988743    6789999999999999 9999999889999999999999996554344432 2112


Q ss_pred             hHhh-hccccccccChHHHHHHHhhhhccCCHHHH--HHHHHHHHHHHHHHHHHhhc----------------------c
Q 013728          116 VGKL-FKTCLLMKAGDDAKRMRRMMMMSFLSPNAL--MKYVERIDMITQQHIATYWE----------------------G  170 (437)
Q Consensus       116 ~~~~-~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~----------------------~  170 (437)
                      ...+ .|.+++..+|+.|+++|+.+ .+.|++..+  +.+.+.+.+.++.+++....                      .
T Consensus        85 ~~~~~~~~~l~~~~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~  163 (476)
T 2fdv_A           85 FDWVFKGYGVVFSNGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI  163 (476)
T ss_dssp             HHHHHTTCSSSSCCHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred             HhhhcCCCCeEecCchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHH
Confidence            2222 24578888999999999999 777776655  66778888877777763211                      0


Q ss_pred             cccc----------------------------------Cc---cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-
Q 013728          171 VMSF----------------------------------PV---NFPGTTFYKSIRAADAIREELIKLIAKQTREALG-S-  211 (437)
Q Consensus       171 ~~~~----------------------------------~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-  211 (437)
                      +++.                                  |+   ++|. ..++..++...+.+++.+.+++ +++..+ . 
T Consensus       164 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~  241 (476)
T 2fdv_A          164 VFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKVEH-NQRTLDPNS  241 (476)
T ss_dssp             HHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHH-HHTTCCTTS
T ss_pred             HcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCc-HHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCC
Confidence            1111                                  11   1121 2234445566777788888877 665432 2 


Q ss_pred             chhHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCC
Q 013728          212 KQDLLSRLVVIADS----NGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGEL  287 (437)
Q Consensus       212 ~~~~l~~ll~~~~~----~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~  287 (437)
                      ..|+++.+++..++    .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++   .++.
T Consensus       242 ~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~---~~~~  318 (476)
T 2fdv_A          242 PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG---KNRQ  318 (476)
T ss_dssp             CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC---SSSC
T ss_pred             CccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhc---CCCC
Confidence            57899999986543    2345999999999999999999999999999999999999999999999999986   2456


Q ss_pred             CCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC
Q 013728          288 LKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG  366 (437)
Q Consensus       288 ~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  366 (437)
                      ++++++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.+
T Consensus       319 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~  398 (476)
T 2fdv_A          319 PKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK  398 (476)
T ss_dssp             CCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTT
T ss_pred             CChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCC
Confidence            899999999999999999999999999 7899999999999999999999999999999999999999999999999653


Q ss_pred             ---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCC--cc---cccccCCCCCccEEEeecc
Q 013728          367 ---ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEK--FG---YDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       367 ---~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~--~~---~~~~~~~~~~~~v~~~~r~  434 (437)
                         ..+..++|||+|+|.|+|+++|.+|++++++.|+++|++++.++...  ..   ...+..| .++.|++++|+
T Consensus       399 ~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 2fdv_A          399 GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFLPRH  473 (476)
T ss_dssp             SCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEEEC-
T ss_pred             CCCCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEEecc
Confidence               23568999999999999999999999999999999999998754321  22   2334556 68999999996


No 13 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.6e-67  Score=513.57  Aligned_cols=389  Identities=19%  Similarity=0.272  Sum_probs=288.5

Q ss_pred             CCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC-
Q 013728           34 PNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW-  112 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~-  112 (437)
                      ++.+.||||+++|++||++.+.     .+++.++.+|+++||+ ||++++++.++|+++||+++++|+.++...|..+. 
T Consensus         6 ~~~~~pPgP~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~   79 (507)
T 3pm0_A            6 SSKGKPPGPFAWPLIGNAAAVG-----QAAHLSFARLARRYGD-VFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPS   79 (507)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCC
T ss_pred             CCCCCCcCCCCCCeeCchhhcC-----ccHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCc
Confidence            4567899999999999999886     5899999999999999 99999999999999999999999976655555332 


Q ss_pred             hhhhHhh-hcccccc-ccChHHHHHHHhhhhccCCHH------HHHHHHHHHHHHHHHHHHHhhc---------------
Q 013728          113 PSSVGKL-FKTCLLM-KAGDDAKRMRRMMMMSFLSPN------ALMKYVERIDMITQQHIATYWE---------------  169 (437)
Q Consensus       113 ~~~~~~~-~g~~l~~-~~g~~~~~~R~~~~~~~~~~~------~l~~~~~~~~~~~~~~~~~~~~---------------  169 (437)
                      ......+ .|.++++ .+|+.|+++|+.+ .+.|+..      .++.+.+.+.+.++++++....               
T Consensus        80 ~~~~~~~~~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~  158 (507)
T 3pm0_A           80 FASFRVVSGGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTV  158 (507)
T ss_dssp             CHHHHHGGGGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHH
T ss_pred             chHHHhhcCCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHH
Confidence            2222222 3446644 5699999999999 5543322      1334666777776666653211               


Q ss_pred             -----------------------------------c------ccccCc--cCCCh---hhHHHHHHHHHHHHHHHHHHHH
Q 013728          170 -----------------------------------G------VMSFPV--NFPGT---TFYKSIRAADAIREELIKLIAK  203 (437)
Q Consensus       170 -----------------------------------~------~~~~~~--~~p~~---~~~~~~~~~~~~~~~~~~~i~~  203 (437)
                                                         .      ...+|+  ++|..   ..++..+..+.+.+++.+.+++
T Consensus       159 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~  238 (507)
T 3pm0_A          159 VAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLR  238 (507)
T ss_dssp             HHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                               0      001121  23333   2445566777788888888887


Q ss_pred             HHHHhcC--C-chhHHHHHHHHHhh--cC------CCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHH
Q 013728          204 QTREALG--S-KQDLLSRLVVIADS--NG------KFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVL  272 (437)
Q Consensus       204 ~~~~~~~--~-~~~~l~~ll~~~~~--~~------~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~  272 (437)
                       +++..+  . ..|+++.+++..+.  .+      ..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       239 -~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~  317 (507)
T 3pm0_A          239 -HCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQ  317 (507)
T ss_dssp             -HHHHCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             -HHhccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence             655432  2 67899998865432  11      248999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCC
Q 013728          273 REQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLF  351 (437)
Q Consensus       273 ~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~  351 (437)
                      +||+++++   .++.++.+++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|
T Consensus       318 ~Ei~~~~~---~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~  394 (507)
T 3pm0_A          318 AELDQVVG---RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW  394 (507)
T ss_dssp             HHHHHHTC---TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTC
T ss_pred             HHHHHhcC---CCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccC
Confidence            99999975   3467899999999999999999999999999 4789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCC-----CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCC-Cccc--ccccCCC
Q 013728          352 PNPETFDASRFEREGA-----TPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDE-KFGY--DPMLSPS  423 (437)
Q Consensus       352 ~~p~~F~P~R~l~~~~-----~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~--~~~~~~~  423 (437)
                      +||++|+||||++.+.     ....++|||+|+|.|+|+++|.+|++++++.|+++||+++.++.. +...  ..+..| 
T Consensus       395 ~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-  473 (507)
T 3pm0_A          395 PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKP-  473 (507)
T ss_dssp             SSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEE-
T ss_pred             CCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccC-
Confidence            9999999999997642     125799999999999999999999999999999999999874432 2222  123334 


Q ss_pred             CCccEEEeecc
Q 013728          424 QGLPIRLQPHQ  434 (437)
Q Consensus       424 ~~~~v~~~~r~  434 (437)
                      .+++|++++|+
T Consensus       474 ~~~~v~~~~R~  484 (507)
T 3pm0_A          474 KSFKVNVTLRE  484 (507)
T ss_dssp             CSCCEEEEESS
T ss_pred             CCcEEEEEEcc
Confidence            45799999996


No 14 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=4.6e-67  Score=507.17  Aligned_cols=387  Identities=22%  Similarity=0.333  Sum_probs=309.6

Q ss_pred             CCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC-hh
Q 013728           36 PHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW-PS  114 (437)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~-~~  114 (437)
                      .+.||||+++|++||++.+..    ++++.++.+++++||+ +|++++++.++++++|++.+++|+.++...|..+. ..
T Consensus         9 ~~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~   83 (476)
T 1po5_A            9 GKLPPGPSPLPVLGNLLQMDR----KGLLRSFLRLREKYGD-VFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIA   83 (476)
T ss_dssp             CCCCCCSCCBTTTBTGGGCCT----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGG
T ss_pred             CCCCcCCCCCCccccHHhccC----CcHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcH
Confidence            368999999999999988733    6899999999999999 99999988899999999999999965543344321 11


Q ss_pred             hhHhh-hccccccccChHHHHHHHhhhhccCCHH--HHHHHHHHHHHHHHHHHHHhhc----------------------
Q 013728          115 SVGKL-FKTCLLMKAGDDAKRMRRMMMMSFLSPN--ALMKYVERIDMITQQHIATYWE----------------------  169 (437)
Q Consensus       115 ~~~~~-~g~~l~~~~g~~~~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~----------------------  169 (437)
                      ....+ .|.+++..+|+.|+++|+++ .+.|++.  .++.+.+.+.+.++++++....                      
T Consensus        84 ~~~~~~~~~~l~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~  162 (476)
T 1po5_A           84 VVDPIFQGYGVIFANGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICS  162 (476)
T ss_dssp             GGCSCCSSCCCCCSSHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCCceEecCCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence            12222 34478788999999999988 6666665  4566777777777777653211                      


Q ss_pred             cccc----------------------------------cCc---cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Q 013728          170 GVMS----------------------------------FPV---NFPGTTFYKSIRAADAIREELIKLIAKQTREALG-S  211 (437)
Q Consensus       170 ~~~~----------------------------------~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~  211 (437)
                      .+++                                  +|+   ++|. ..++..+..+.+.+++.+.+++ +++..+ .
T Consensus       163 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~  240 (476)
T 1po5_A          163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG-THRQIYRNLQEINTFIGQSVEK-HRATLDPS  240 (476)
T ss_dssp             HHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSC-SHHHHHHHHHHHHHHHHHHHHH-HHTTCCTT
T ss_pred             HHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHH-HHHhcCCC
Confidence            0000                                  000   1121 1234455667788888888887 765432 2


Q ss_pred             -chhHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCC
Q 013728          212 -KQDLLSRLVVIADS----NGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGE  286 (437)
Q Consensus       212 -~~~~l~~ll~~~~~----~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~  286 (437)
                       ..|+++.++...++    .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++   .++
T Consensus       241 ~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~---~~~  317 (476)
T 1po5_A          241 NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIG---SHR  317 (476)
T ss_dssp             SCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC---SSS
T ss_pred             CcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---CCC
Confidence             46899998865432    1234889999999999999999999999999999999999999999999999986   246


Q ss_pred             CCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCC
Q 013728          287 LLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFERE  365 (437)
Q Consensus       287 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  365 (437)
                      .++++++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.
T Consensus       318 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~  397 (476)
T 1po5_A          318 PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA  397 (476)
T ss_dssp             CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCT
T ss_pred             CCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCC
Confidence            6899999999999999999999999999 689999999999999999999999999999999999999999999999965


Q ss_pred             C---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCC--c---ccccccCCCCCccEEEeecc
Q 013728          366 G---ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEK--F---GYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       366 ~---~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~--~---~~~~~~~~~~~~~v~~~~r~  434 (437)
                      +   .....++|||+|+|.|+|+++|.+|++++++.|+++|++++.++...  .   ....+..| .++.|++++|+
T Consensus       398 ~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 1po5_A          398 NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFLARH  473 (476)
T ss_dssp             TSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEEECC
T ss_pred             CCCccCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEEecC
Confidence            3   23568999999999999999999999999999999999998754321  2   22335556 78999999996


No 15 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1.4e-67  Score=514.00  Aligned_cols=387  Identities=19%  Similarity=0.220  Sum_probs=302.9

Q ss_pred             CCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh
Q 013728           34 PNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP  113 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~  113 (437)
                      .+.++||||++      ++++..    ++++..+.+|+++||+ ||++++++.++++++|++++++|+.+++..|..+..
T Consensus        26 ~~~~lPPGP~~------l~~~~~----~~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~   94 (496)
T 3qz1_A           26 RNLHLPPLVPG------FLHLLQ----PNLPIHLLSLTQKLGP-VYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ   94 (496)
T ss_dssp             ---CCCCBCSC------SCTTSS----SCHHHHHHHGGGTSCS-EEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCC
T ss_pred             cCCCCCcCCcc------ccccCC----CcchHHHHHHHHHhCC-EEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCC
Confidence            45689999987      334433    6899999999999999 999999999999999999999999877655543321


Q ss_pred             h-hhHh-hhcc-cccccc-ChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------
Q 013728          114 S-SVGK-LFKT-CLLMKA-GDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------  169 (437)
Q Consensus       114 ~-~~~~-~~g~-~l~~~~-g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------  169 (437)
                      . .... ..|. +++..+ |+.|+++|+.+ .+.|+...++.+.+.+.+.++++++....                    
T Consensus        95 ~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi  173 (496)
T 3qz1_A           95 IPSYKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSII  173 (496)
T ss_dssp             CTTTTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHT
T ss_pred             cchHHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHH
Confidence            1 1122 2344 788888 99999999999 77777666666888888888877764221                    


Q ss_pred             --ccc-------------------------------ccC--ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c
Q 013728          170 --GVM-------------------------------SFP--VNFPGTTFYKSIRAADAIREELIKLIAKQTREALGS--K  212 (437)
Q Consensus       170 --~~~-------------------------------~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~  212 (437)
                        ..+                               .+|  .++|....++..+..+.+.+++.+.+++ +++..+.  .
T Consensus       174 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~  252 (496)
T 3qz1_A          174 CYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRR-HKESMVAGQW  252 (496)
T ss_dssp             TTTSTTCCCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHSCCSSCC
T ss_pred             HHHhcCCCCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCc
Confidence              000                               011  1233344556677788888899999988 7665432  6


Q ss_pred             hhHHHHHHHHHhhc----C-CCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhccc-CC
Q 013728          213 QDLLSRLVVIADSN----G-KFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQ-GE  286 (437)
Q Consensus       213 ~~~l~~ll~~~~~~----~-~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~-~~  286 (437)
                      .|+++.+++...+.    + ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++.... ++
T Consensus       253 ~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~  332 (496)
T 3qz1_A          253 RDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSR  332 (496)
T ss_dssp             SSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSC
T ss_pred             cchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCC
Confidence            78999998765432    1 159999999999999999999999999999999999999999999999999863211 34


Q ss_pred             CCCHHHhhcChHHHHHHHHhhcCCCCCcc-cccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCC
Q 013728          287 LLKWEDIQKMKYTWNVASEVMRLSPPAIG-AFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFERE  365 (437)
Q Consensus       287 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  365 (437)
                      .+ ++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.
T Consensus       333 ~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~  411 (496)
T 3qz1_A          333 VT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEP  411 (496)
T ss_dssp             CS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCCC--
T ss_pred             CC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCcccccCC
Confidence            56 89999999999999999999999995 78999999999999999999999999999999999999999999999976


Q ss_pred             CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC--CCccc----ccccCCCCCccEEEeeccCC
Q 013728          366 GATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD--EKFGY----DPMLSPSQGLPIRLQPHQCS  436 (437)
Q Consensus       366 ~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~--~~~~~----~~~~~~~~~~~v~~~~r~~~  436 (437)
                      +.. ..++|||+|+|.|+|+++|.+|++++++.|+++|++++.+++  ..+..    ..+..| .++.|++++|+..
T Consensus       412 ~~~-~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R~~~  486 (496)
T 3qz1_A          412 GAN-PSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKV-QPFQVRLQPRGVE  486 (496)
T ss_dssp             -CC-CCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCC-CCCCCCCCCC---
T ss_pred             CCC-cCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecC-CceEEEEEEeccc
Confidence            432 389999999999999999999999999999999999987543  22222    223344 5899999999753


No 16 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=5e-67  Score=507.16  Aligned_cols=386  Identities=20%  Similarity=0.297  Sum_probs=300.5

Q ss_pred             CCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc-Chhh
Q 013728           37 HLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW-WPSS  115 (437)
Q Consensus        37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~-~~~~  115 (437)
                      +.||||+++|++||++.+..    ++++.++.+++++||+ ||++++++.++++++|++.+++|+.++...+.++ ....
T Consensus        11 ~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~   85 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIGI----KDISKSLTNLSKVYGP-VFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPL   85 (477)
T ss_dssp             BCCCCSSSCC-----CCBCH----HHHHHHHHHHHHHHCS-EEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSC
T ss_pred             CCCCCCCCCceeccHhhcCC----CChHHHHHHHHHHhCC-EEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchh
Confidence            58999999999999987732    4789999999999999 9999998889999999999999996544334322 1111


Q ss_pred             hHhh-hccccccccChHHHHHHHhhhhccCCHH--HHHHHHHHHHHHHHHHHHHhhc-----------------------
Q 013728          116 VGKL-FKTCLLMKAGDDAKRMRRMMMMSFLSPN--ALMKYVERIDMITQQHIATYWE-----------------------  169 (437)
Q Consensus       116 ~~~~-~g~~l~~~~g~~~~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~-----------------------  169 (437)
                      .... .|.+++..+|+.|+++|+.+ .+.|++.  .++.+.+.+.+.++.+++....                       
T Consensus        86 ~~~~~~~~~l~~~~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~  164 (477)
T 1r9o_A           86 AERANRGFGIVFSNGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI  164 (477)
T ss_dssp             CCTTTCTTSSTTCCHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHH
T ss_pred             hhhccCCCceEecCChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHH
Confidence            1111 34577778999999999988 6666654  2344556666666655542210                       


Q ss_pred             ----------------------cc---c--------ccCc---cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-
Q 013728          170 ----------------------GV---M--------SFPV---NFPGTTFYKSIRAADAIREELIKLIAKQTREALG-S-  211 (437)
Q Consensus       170 ----------------------~~---~--------~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-  211 (437)
                                            .+   .        .+|+   ++|. ..++..++...+.+++.+.+++ +++..+ . 
T Consensus       165 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~  242 (477)
T 1r9o_A          165 IFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPG-THNKLLKNVAFMKSYILEKVKE-HQESMDMNN  242 (477)
T ss_dssp             HHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTT-CHHHHHHHHHHHHHHHHHHHHH-HHHTCCTTC
T ss_pred             HccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcch-HHHHHHHHHHHHHHHHHHHHHH-HHhccCCCC
Confidence                                  00   0        0111   1121 1244556677788888888888 765432 2 


Q ss_pred             chhHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCC
Q 013728          212 KQDLLSRLVVIADS----NGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGEL  287 (437)
Q Consensus       212 ~~~~l~~ll~~~~~----~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~  287 (437)
                      ..|+++.+++..++    .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++   .++.
T Consensus       243 ~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~~~  319 (477)
T 1r9o_A          243 PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG---RNRS  319 (477)
T ss_dssp             CCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC---SSSC
T ss_pred             chHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC---CCCC
Confidence            56899998865432    1345999999999999999999999999999999999999999999999999986   2467


Q ss_pred             CCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC
Q 013728          288 LKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG  366 (437)
Q Consensus       288 ~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  366 (437)
                      ++++++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.+
T Consensus       320 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~  399 (477)
T 1r9o_A          320 PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEG  399 (477)
T ss_dssp             CCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTT
T ss_pred             CChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECCC
Confidence            899999999999999999999999999 6899999999999999999999999999999999999999999999999653


Q ss_pred             ---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCC--c---ccccccCCCCCccEEEeecc
Q 013728          367 ---ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEK--F---GYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       367 ---~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~--~---~~~~~~~~~~~~~v~~~~r~  434 (437)
                         .....++|||+|+|.|+|+++|.+|++++++.|+++|++++.++...  .   ....+..| .++.|++++|+
T Consensus       400 ~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~  474 (477)
T 1r9o_A          400 GNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFIPIH  474 (477)
T ss_dssp             SCBCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEEECC
T ss_pred             CCcCccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEEEec
Confidence               23558999999999999999999999999999999999998754321  1   22334556 68999999996


No 17 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=5.8e-67  Score=508.43  Aligned_cols=391  Identities=17%  Similarity=0.215  Sum_probs=307.4

Q ss_pred             CCCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC
Q 013728           33 YPNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW  112 (437)
Q Consensus        33 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~  112 (437)
                      .++.+.+|||+++|+. +++.+......++++.++.+|+++||+ ||++++|+.++|+++||+++++|+.+++. +..+.
T Consensus         5 ~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~-f~~r~   81 (487)
T 3n9y_A            5 PRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGP-IYREKLGNVESVYVIDPEDVALLFKSEGP-NPERF   81 (487)
T ss_dssp             CBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHHTCCS-SCCCC
T ss_pred             CCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCc-eeeccCCCCCEEEEcCHHHHHHHHHhCCC-CCCCC
Confidence            3567789999988876 787776532224788999999999999 99999999999999999999999987653 33222


Q ss_pred             -hhhh---Hhh--hccccccccChHHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHHHHhh-------------c---
Q 013728          113 -PSSV---GKL--FKTCLLMKAGDDAKRMRRMMMMS-FLSPNALMKYVERIDMITQQHIATYW-------------E---  169 (437)
Q Consensus       113 -~~~~---~~~--~g~~l~~~~g~~~~~~R~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~-------------~---  169 (437)
                       ....   ...  .+.+++..+|+.|+++|+.+ .+ +|++..++.+.+.+.+.++++++...             +   
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~  160 (487)
T 3n9y_A           82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVAL-NQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISD  160 (487)
T ss_dssp             CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHH-HHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHH
T ss_pred             CCcHHHHHHHHccccCCCccCCcHHHHHHHHhc-CcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHH
Confidence             1111   112  23478889999999999999 55 69999999999999888887775321             0   


Q ss_pred             ------------cccccCc-----------------------------cCCC--------hhhHHHHHHHHHHHHHHHHH
Q 013728          170 ------------GVMSFPV-----------------------------NFPG--------TTFYKSIRAADAIREELIKL  200 (437)
Q Consensus       170 ------------~~~~~~~-----------------------------~~p~--------~~~~~~~~~~~~~~~~~~~~  200 (437)
                                  .+++...                             .+|.        ..+++.....+.+.+.+.+.
T Consensus       161 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (487)
T 3n9y_A          161 DLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIY  240 (487)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHH
Confidence                        0000000                             1111        11122223333444555555


Q ss_pred             HHHHHH----HhcC--C-chhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHH
Q 013728          201 IAKQTR----EALG--S-KQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLR  273 (437)
Q Consensus       201 i~~~~~----~~~~--~-~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~  273 (437)
                      +++ +.    +..+  . ..|+++.+++.     ..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++
T Consensus       241 i~~-~~~~~~~~~~~~~~~~d~l~~ll~~-----~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~  314 (487)
T 3n9y_A          241 TQN-FYWELRQKGSVHHDYRGILYRLLGD-----SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRA  314 (487)
T ss_dssp             HHH-HHHHHHHHCCCCSSCCCHHHHHHHS-----CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHH-HHHHHHhcCCcccchHHHHHHHHhc-----CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHH
Confidence            543 22    1111  2 46888888863     2389999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCC
Q 013728          274 EQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPN  353 (437)
Q Consensus       274 Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  353 (437)
                      ||+++++.   .+.+.++++++||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|.++.+++||||++|+|
T Consensus       315 Ei~~~~~~---~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d  391 (487)
T 3n9y_A          315 EVLAARHQ---AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD  391 (487)
T ss_dssp             HHHHHHHH---TTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSS
T ss_pred             HHHHhhcc---cccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCC
Confidence            99999873   344568999999999999999999999999889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC--CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCcccccccCCCCCccEEE
Q 013728          354 PETFDASRFEREG--ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKFGYDPMLSPSQGLPIRL  430 (437)
Q Consensus       354 p~~F~P~R~l~~~--~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~v~~  430 (437)
                      |++|+||||++.+  .....++|||.|+|.|+|+++|.+|++++++.|+++|++++.++. .+.....+..|+.++.|+|
T Consensus       392 p~~F~PeR~l~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~  471 (487)
T 3n9y_A          392 PENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTF  471 (487)
T ss_dssp             TTSCCGGGGTCSCTTSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEESSCCCEEE
T ss_pred             cccCChhhcCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCCCCceeEE
Confidence            9999999999764  236789999999999999999999999999999999999987542 2334456788999999999


Q ss_pred             eeccCC
Q 013728          431 QPHQCS  436 (437)
Q Consensus       431 ~~r~~~  436 (437)
                      ++|+-+
T Consensus       472 ~~r~~~  477 (487)
T 3n9y_A          472 WPFNQE  477 (487)
T ss_dssp             EEC---
T ss_pred             EECCcc
Confidence            999643


No 18 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=2.1e-66  Score=504.81  Aligned_cols=388  Identities=16%  Similarity=0.232  Sum_probs=302.4

Q ss_pred             CCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC-h
Q 013728           35 NPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW-P  113 (437)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~-~  113 (437)
                      +.+.||||+++|++||++.+.     ++++..+.+|+++||+ ||++++++.++++++|++.+++|+.+++..|..+. .
T Consensus        14 ~lp~~PgP~~~p~~G~~~~~~-----~~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~   87 (495)
T 2hi4_A           14 GLKSPPEPWGWPLLGHVLTLG-----KNPHLALSRMSQRYGD-VLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDL   87 (495)
T ss_dssp             TCBCCCCCCCBTTTBTHHHHT-----TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCC
T ss_pred             CCCCCCCCCCCcceeeHHhcC-----ccHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCc
Confidence            444559999999999999875     5799999999999999 99999999999999999999999987654454332 1


Q ss_pred             hhhHhhh-ccccccc--cChHHHHHHHhhhhccCC---HHHH---H---HHHHHHHHHHHHHHHHhh---------c---
Q 013728          114 SSVGKLF-KTCLLMK--AGDDAKRMRRMMMMSFLS---PNAL---M---KYVERIDMITQQHIATYW---------E---  169 (437)
Q Consensus       114 ~~~~~~~-g~~l~~~--~g~~~~~~R~~~~~~~~~---~~~l---~---~~~~~~~~~~~~~~~~~~---------~---  169 (437)
                      .....+. |.+++..  +|+.|+++|+.+ .+.|+   ..+.   +   .+.+.+.+.++++++...         +   
T Consensus        88 ~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~  166 (495)
T 2hi4_A           88 YTSTLITDGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYN  166 (495)
T ss_dssp             HHHHTSTTSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHH
T ss_pred             HHHHHhcCCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHH
Confidence            2222222 3477666  699999999999 55432   2111   1   344555554444443210         0   


Q ss_pred             ---------------c-----------------------c------cccCc--cCCChhhHHHHHHHHHHHHHHHHHHHH
Q 013728          170 ---------------G-----------------------V------MSFPV--NFPGTTFYKSIRAADAIREELIKLIAK  203 (437)
Q Consensus       170 ---------------~-----------------------~------~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~  203 (437)
                                     +                       .      ..+|+  ++|....++..++.+.+.+++.+.+++
T Consensus       167 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~  246 (495)
T 2hi4_A          167 QVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQE  246 (495)
T ss_dssp             HHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence                           0                       0      00111  123333455666777888889999988


Q ss_pred             HHHHhcC-C-chhHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHH
Q 013728          204 QTREALG-S-KQDLLSRLVVIADS----NGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIG  277 (437)
Q Consensus       204 ~~~~~~~-~-~~~~l~~ll~~~~~----~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~  277 (437)
                       +++..+ . ..|+++.+++...+    .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++
T Consensus       247 -r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~  325 (495)
T 2hi4_A          247 -HYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDT  325 (495)
T ss_dssp             -HHHTCCTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             -HHHhhcccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence             766432 2 57899999975432    1235899999999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCC
Q 013728          278 IAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPET  356 (437)
Q Consensus       278 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  356 (437)
                      +++   .++.++++++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus       326 v~~---~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~  402 (495)
T 2hi4_A          326 VIG---RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSE  402 (495)
T ss_dssp             HTT---TSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTS
T ss_pred             hcC---CCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCc
Confidence            986   3456899999999999999999999999999 588999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCc--ccccccCCCCCcc
Q 013728          357 FDASRFEREGA------TPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKF--GYDPMLSPSQGLP  427 (437)
Q Consensus       357 F~P~R~l~~~~------~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~--~~~~~~~~~~~~~  427 (437)
                      |+||||++.+.      .+..++|||+|+|.|+|+++|++|++++++.|+++|++++.++. ..+  ....+..|....+
T Consensus       403 F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~  482 (495)
T 2hi4_A          403 FRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARCEH  482 (495)
T ss_dssp             CCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCCCCCC
T ss_pred             cCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCCCcce
Confidence            99999997532      24578999999999999999999999999999999999986432 222  2233455654338


Q ss_pred             EEEeecc
Q 013728          428 IRLQPHQ  434 (437)
Q Consensus       428 v~~~~r~  434 (437)
                      |+++ |.
T Consensus       483 v~~~-R~  488 (495)
T 2hi4_A          483 VQAR-RF  488 (495)
T ss_dssp             BEEE-CC
T ss_pred             EEEE-Ec
Confidence            9998 84


No 19 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=6.3e-66  Score=499.46  Aligned_cols=389  Identities=22%  Similarity=0.296  Sum_probs=308.1

Q ss_pred             CCCCCCCCcccccccchHHHHhhccCCC--chHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC
Q 013728           35 NPHLPPGNLGWPVIGETLGFIRAGFEGK--PERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW  112 (437)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~--~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~  112 (437)
                      +.++||||+++|++||++.+..    .+  ++.++.+|+++||+ ||++++++.++++++|++.+++++.+++..|..+.
T Consensus        10 ~~~lpPgP~~~p~~G~~~~~~~----~~~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~   84 (481)
T 3czh_A           10 PMGFPPGPPGLPFIGNIYSLAA----SSELPHVYMRKQSQVYGE-IFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP   84 (481)
T ss_dssp             --CCCCCCCCBTTTBHHHHHHH----CSSCHHHHHHHHHHHHCS-EEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCC
T ss_pred             CCCCCCCCCCCcccccHhhcCc----ccCcHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhhchHhhCCCC
Confidence            4578999999999999998875    33  89999999999999 99999999999999999999999987654444332


Q ss_pred             -hhhhHhhhcc-cc-ccccChHHHHHHHhhhhccCCHHHH--HHHHHHHHHHHHHHHHHhhc------------------
Q 013728          113 -PSSVGKLFKT-CL-LMKAGDDAKRMRRMMMMSFLSPNAL--MKYVERIDMITQQHIATYWE------------------  169 (437)
Q Consensus       113 -~~~~~~~~g~-~l-~~~~g~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~------------------  169 (437)
                       ......+.+. ++ +..+|+.|+++|+.+ .+.|++.++  ..+.+.+.+.++.+++....                  
T Consensus        85 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~  163 (481)
T 3czh_A           85 CLPLFMKMTKMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN  163 (481)
T ss_dssp             CCHHHHHHHTTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHH
T ss_pred             CcHHHHhhcCCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence             1222223332 54 457899999999999 776665433  44667777777666653211                  


Q ss_pred             ----cccc----------------------------------cCc--cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 013728          170 ----GVMS----------------------------------FPV--NFPGTTFYKSIRAADAIREELIKLIAKQTREAL  209 (437)
Q Consensus       170 ----~~~~----------------------------------~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  209 (437)
                          .+++                                  +|+  ++|....++..++...+.+++.+.+++ +++..
T Consensus       164 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~  242 (481)
T 3czh_A          164 ITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEK-ASVNR  242 (481)
T ss_dssp             HHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHH-HHTTC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence                0000                                  111  123223345556677788888888887 66543


Q ss_pred             C-C-chhHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcc
Q 013728          210 G-S-KQDLLSRLVVIADS----NGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKE  283 (437)
Q Consensus       210 ~-~-~~~~l~~ll~~~~~----~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~  283 (437)
                      + . ..|+++.+++...+    .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++   
T Consensus       243 ~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---  319 (481)
T 3czh_A          243 KPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG---  319 (481)
T ss_dssp             CTTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC---
T ss_pred             CCCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcC---
Confidence            2 2 57899999976542    1345999999999999999999999999999999999999999999999999986   


Q ss_pred             cCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCC
Q 013728          284 QGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRF  362 (437)
Q Consensus       284 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  362 (437)
                      .++.++++++++||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||
T Consensus       320 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~  399 (481)
T 3czh_A          320 PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERF  399 (481)
T ss_dssp             SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGG
T ss_pred             CCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCce
Confidence            3567899999999999999999999999999 688999999999999999999999999999999999999999999999


Q ss_pred             CCCC---CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCcc--cccccCCCCCccEEEeecc
Q 013728          363 EREG---ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKFG--YDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       363 l~~~---~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~--~~~~~~~~~~~~v~~~~r~  434 (437)
                      ++++   ..+..++|||+|+|.|+|+++|.+|++++++.|+++|++++.++. ....  ...+.. +..+.++++||-
T Consensus       400 l~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~  476 (481)
T 3czh_A          400 LDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQ-PQPYLICAERRH  476 (481)
T ss_dssp             BCTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCC-CCCCCBEEEECC
T ss_pred             eCCCCCCcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceec-CCceEEEEEecc
Confidence            9653   346679999999999999999999999999999999999986432 1221  222333 445889999884


No 20 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=3.2e-66  Score=499.89  Aligned_cols=384  Identities=18%  Similarity=0.269  Sum_probs=310.0

Q ss_pred             CCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChhh-
Q 013728           37 HLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSS-  115 (437)
Q Consensus        37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~-  115 (437)
                      +.||||+++|++||++.+..    ++++..+.+|+++||+ ||++++++.++++++|++.+++|+.++.  +....... 
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~----~~~~~~~~~~~~~yG~-v~~~~~~~~~~v~v~~~~~~~~il~~~~--f~~~~~~~~   75 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNT----DKPVQALMKIADELGE-IFKFEAPGRVTRYLSSQRLIKEACDESR--FDKNLSQAL   75 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCS----SCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHTCTTT--EEECCCHHH
T ss_pred             CCCCCCCCCCccccHHHHhc----ccchHHHHHHHHHhCC-eEEEecCCccEEEECCHHHHHHHHhhcC--cCcCchhHH
Confidence            45799999999999998754    5789999999999999 9999999999999999999999997543  33221111 


Q ss_pred             --hHhhhccccccc--cChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc----------------------
Q 013728          116 --VGKLFKTCLLMK--AGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE----------------------  169 (437)
Q Consensus       116 --~~~~~g~~l~~~--~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------------  169 (437)
                        +....|.+++..  +|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                      
T Consensus        76 ~~~~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~  154 (470)
T 2ij2_A           76 KFVRDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG  154 (470)
T ss_dssp             HHHHHHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHH
Confidence              122345567665  899999999999 88899999999999999998888864211                      


Q ss_pred             -cccccCc---------------------------------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhH
Q 013728          170 -GVMSFPV---------------------------------NFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDL  215 (437)
Q Consensus       170 -~~~~~~~---------------------------------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  215 (437)
                       ..++.+.                                 +++....++..+..+.+.+++.+.+++ +++......|+
T Consensus       155 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~dl  233 (470)
T 2ij2_A          155 LCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIAD-RKASGEQSDDL  233 (470)
T ss_dssp             HHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCSSH
T ss_pred             HHHcCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHH-HHhcccCchhH
Confidence             0000000                                 000011123344556677778888877 66543336789


Q ss_pred             HHHHHHHHhh-cCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhh
Q 013728          216 LSRLVVIADS-NGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQ  294 (437)
Q Consensus       216 l~~ll~~~~~-~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~  294 (437)
                      ++.|++..++ .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++    .+.+++++++
T Consensus       234 l~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~~~~~~~  309 (470)
T 2ij2_A          234 LTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV----DPVPSYKQVK  309 (470)
T ss_dssp             HHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC----SSSCCHHHHH
T ss_pred             HHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC----CCCCCHHHHh
Confidence            9999976432 3456999999999999999999999999999999999999999999999999976    3459999999


Q ss_pred             cChHHHHHHHHhhcCCCCCcccccccccccccCC-eeeCCCCEEeeccccccCCCCCC-CCCCCCCCCCCCCCC-CCCCc
Q 013728          295 KMKYTWNVASEVMRLSPPAIGAFREALVDFTYSG-YTIPKGWKLHWSTGSTHKDETLF-PNPETFDASRFEREG-ATPYS  371 (437)
Q Consensus       295 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~-~~~~~  371 (437)
                      +||||+|||+|+||++|+++.+.|.+.+|++++| |.|||||.|.++.+++||||++| +||++|+||||.+.. ..+..
T Consensus       310 ~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~~~~~~~~~~~  389 (470)
T 2ij2_A          310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA  389 (470)
T ss_dssp             TCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGGSSGGGSCTTS
T ss_pred             CCHHHHHHHHHHHhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCccccCCCCcCCCcc
Confidence            9999999999999999999988899999999999 99999999999999999999999 999999999992211 23577


Q ss_pred             ccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCCCccc--ccccCCCCCccEEEeeccC
Q 013728          372 YVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDEKFGY--DPMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       372 ~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~r~~  435 (437)
                      ++|||+|+|.|+|+++|.+|++++++.|+++|+++ .++...+..  ..+..|. +++|++++|+.
T Consensus       390 ~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~~~~~~~~~~~~p~-~~~v~~~~R~~  453 (470)
T 2ij2_A          390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIKETLTLKPE-GFVVKAKSKKI  453 (470)
T ss_dssp             CCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCCCCCEEESSSEEET-TCEEEEEECCC
T ss_pred             ccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCCccccccceEecCC-CeEEEEEEccC
Confidence            89999999999999999999999999999999999 444433332  3355666 89999999963


No 21 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=1.7e-67  Score=508.89  Aligned_cols=382  Identities=21%  Similarity=0.315  Sum_probs=287.3

Q ss_pred             CCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccc-eeccChh
Q 013728           36 PHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKL-VRTWWPS  114 (437)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~-~~~~~~~  114 (437)
                      ...||||+++|++||++.+.+     +++.++.++++ ||+ ||++++++.++++++|++.+++|+.++ .+ .+.....
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~-----~p~~~~~~l~~-yGp-v~~~~~g~~~~~vv~~~~~i~~il~~~-~~~~~~~~~~   93 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLAR-----DPLAFMSQLRD-HGD-VVRIKLGPKTVYAVTNPELTGALALNP-DYHIAGPLWE   93 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHH-----CHHHHHHHHGG-GCS-EEEEEETTEEEEEECSHHHHHHHHHCT-TC--------
T ss_pred             CCCCCCCCCCCcccchHHhcc-----CHHHHHHHHHH-hCC-EEEEEeCCccEEEECCHHHHHHHHhCc-CcccccchHH
Confidence            446899999999999999985     79999999988 999 999999999999999999999999877 33 2222233


Q ss_pred             hhHhhhc-cccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------ccc-
Q 013728          115 SVGKLFK-TCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVM-  172 (437)
Q Consensus       115 ~~~~~~g-~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~-  172 (437)
                      ....++| .+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                    .++ 
T Consensus        94 ~~~~~~g~~~l~~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g  172 (467)
T 3dbg_A           94 SLEGLLGKEGVATANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLR  172 (467)
T ss_dssp             ----------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHhcCCCCcccCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhC
Confidence            3445567 588889999999999999 88889999999999999999998874321                    000 


Q ss_pred             --------------------------ccC----ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 013728          173 --------------------------SFP----VNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVI  222 (437)
Q Consensus       173 --------------------------~~~----~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~  222 (437)
                                                ..|    .+++....++..++.+.+.+++.+.+++ +++..+...|+++.|++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~dll~~ll~~  251 (467)
T 3dbg_A          173 GQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAE-RRASGQKPDDLLTALLEA  251 (467)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHH-HTTCCSSCCSHHHHHTTC
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHH-HHhcCCCchHHHHHHHhh
Confidence                                      011    1122222334445566777888888877 655332367999999987


Q ss_pred             HhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHH
Q 013728          223 ADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNV  302 (437)
Q Consensus       223 ~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~  302 (437)
                      .++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++.+++    +..++++++++||||+||
T Consensus       252 ~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~----~~~~~~~~l~~l~yl~a~  327 (467)
T 3dbg_A          252 KDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG----GRPVAFEDVRKLRHTGNV  327 (467)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----TSCCCHHHHTTCHHHHHH
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CCCCCHHHHhhCHHHHHH
Confidence            6555556999999999999999999999999999999999999999999999999976    367899999999999999


Q ss_pred             HHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC---CCCCcccccCCCC
Q 013728          303 ASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG---ATPYSYVPFGGGP  379 (437)
Q Consensus       303 i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~---~~~~~~~~FG~G~  379 (437)
                      |+|+||++|+++.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++.+   .....++|||+|+
T Consensus       328 i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~FG~G~  407 (467)
T 3dbg_A          328 IVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGK  407 (467)
T ss_dssp             HHHHHHHSCSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHTTSCTTSCCSSCSSS
T ss_pred             HHHHhhcCCCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccccCCCccccCCCCCC
Confidence            9999999999998899999999999999999999999999999999999999999999999642   3567899999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhhCceEeeCCCC-CcccccccCCCCCccEEEee
Q 013728          380 RMCPGYEFERLLILVFIHNMIKRFKWDLLIPDE-KFGYDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       380 ~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~  432 (437)
                      |.|+|++||.+|++++++.|+++|++++.++.. ......+..|+ +++++-..
T Consensus       408 r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~l~~~~~~  460 (467)
T 3dbg_A          408 RKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPH-DLLVRPVA  460 (467)
T ss_dssp             SSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEE-ECEEEEEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCC-CCccchhh
Confidence            999999999999999999999999999975432 23333344554 45554433


No 22 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=9.9e-65  Score=492.87  Aligned_cols=385  Identities=22%  Similarity=0.314  Sum_probs=312.0

Q ss_pred             CCCCCCCCCccc-ccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhccccccc-ceecc
Q 013728           34 PNPHLPPGNLGW-PVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENK-LVRTW  111 (437)
Q Consensus        34 ~~~~~ppgp~~~-p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~-~~~~~  111 (437)
                      ...++||||++| |++||++.+.     .+++.++.+++++||+ ||++++++.++++++||+.+++++++++. .+...
T Consensus        10 ~~~~~PPgp~~~lPliG~~~~~~-----~~p~~~~~~l~~~yGp-v~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~   83 (491)
T 3v8d_A           10 RQTGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKF   83 (491)
T ss_dssp             CCTTSCCEEEEEESSTTTTGGGT-----CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHH
T ss_pred             cCCCCCCCCCCCcceeccHHHHh-----cCHHHHHHHHHHHcCC-ceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHH
Confidence            456799999995 9999999997     5899999999999999 99999999999999999999999987653 23333


Q ss_pred             ChhhhHhhhccc-cccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHh---------hc------------
Q 013728          112 WPSSVGKLFKTC-LLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATY---------WE------------  169 (437)
Q Consensus       112 ~~~~~~~~~g~~-l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~------------  169 (437)
                      .......++|.+ +...+|+.|+++|+.+ .+.|++..++.+.+.+.+.+.++++..         +.            
T Consensus        84 ~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~  162 (491)
T 3v8d_A           84 HFALSAKAFGHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM  162 (491)
T ss_dssp             HHHHHHHHHTCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred             HHHHHHHhcCCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence            344455677764 4456899999999999 888899999999999999999998732         11            


Q ss_pred             ------cccccC-----------------------------ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 013728          170 ------GVMSFP-----------------------------VNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQD  214 (437)
Q Consensus       170 ------~~~~~~-----------------------------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  214 (437)
                            .+++.+                             .++|....++..++++.+.+.+.+.+.+ ++   +...+
T Consensus       163 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~-~~---~~~~d  238 (491)
T 3v8d_A          163 FEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQ-KR---ESISE  238 (491)
T ss_dssp             HHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHT-TC---BSCCH
T ss_pred             HHHHHHHHcCccccccchhhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHh-cc---ccccH
Confidence                  011111                             1233334445555555555555544433 22   12678


Q ss_pred             HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhccc-------CCC
Q 013728          215 LLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQ-------GEL  287 (437)
Q Consensus       215 ~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~-------~~~  287 (437)
                      +++.++...++.+ .++++++...++.+++||++||+++++|++++|++||++|+++++||+++++..+.       ...
T Consensus       239 ~l~~l~~~~~~~~-~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~  317 (491)
T 3v8d_A          239 LISLRMFLNDTLS-TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPIC  317 (491)
T ss_dssp             HHHHHHHHHHHHB-CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCC
T ss_pred             HHHHHHHHhhccC-CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcccccccccccccc
Confidence            9998887765444 49999999999999999999999999999999999999999999999999875322       246


Q ss_pred             CCHHHhhcChHHHHHHHHhhcCCCCCccccccccccccc----CCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCC
Q 013728          288 LKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTY----SGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFE  363 (437)
Q Consensus       288 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  363 (437)
                      ++.++++++|||++||+|+||++| .+.++|.+.+|+++    +||.||||+.|.++.+.+|+||++|+||++|+|+||+
T Consensus       318 ~~~~~l~~~~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~  396 (491)
T 3v8d_A          318 LSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL  396 (491)
T ss_dssp             CCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTB
T ss_pred             CCHHHHhcChHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccCccccc
Confidence            899999999999999999999997 55778999999999    9999999999999999999999999999999999999


Q ss_pred             CCCC------------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCC---Ccccc----cccCCCC
Q 013728          364 REGA------------TPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDE---KFGYD----PMLSPSQ  424 (437)
Q Consensus       364 ~~~~------------~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~----~~~~~~~  424 (437)
                      +.+.            .+..++|||+|+|.|+|+++|.+|++++++.|+++||++++++..   .+...    .+..|..
T Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  476 (491)
T 3v8d_A          397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLN  476 (491)
T ss_dssp             CTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSS
T ss_pred             CCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCC
Confidence            6532            246789999999999999999999999999999999999986532   22221    1567888


Q ss_pred             CccEEEe
Q 013728          425 GLPIRLQ  431 (437)
Q Consensus       425 ~~~v~~~  431 (437)
                      ++.|+++
T Consensus       477 ~i~v~~~  483 (491)
T 3v8d_A          477 DIEFKYK  483 (491)
T ss_dssp             CCEEEEE
T ss_pred             CeEEEEE
Confidence            9999886


No 23 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=1.3e-63  Score=480.62  Aligned_cols=366  Identities=19%  Similarity=0.325  Sum_probs=296.5

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChhhhHh-----hhcccccc-ccChHHHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSVGK-----LFKTCLLM-KAGDDAKR  134 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~~~~-----~~g~~l~~-~~g~~~~~  134 (437)
                      ..+|..+.+|+++||+ ||++++++.++|+++||+++++|+.++..............     ++|.+++. .+|+.|++
T Consensus        10 ~~~~~~~~~~~~kyG~-v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~   88 (456)
T 3mdm_A           10 RVLQDVFLDWAKKYGP-VVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHK   88 (456)
T ss_dssp             CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHH
T ss_pred             chHHHHHHHHHHHhCC-eEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccCCCcccCCChHHHHH
Confidence            5688999999999999 99999999999999999999999975432111112222222     23456655 58999999


Q ss_pred             HHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc------------------------cccc-----------------
Q 013728          135 MRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE------------------------GVMS-----------------  173 (437)
Q Consensus       135 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------------~~~~-----------------  173 (437)
                      +|+.+ .+.|++.+++.+.+.+.+.++.+++....                        ..++                 
T Consensus        89 ~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~  167 (456)
T 3mdm_A           89 QRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAV  167 (456)
T ss_dssp             HHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHH
T ss_pred             HHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHH
Confidence            99999 88999999999999999988888763211                        0000                 


Q ss_pred             -------------cCccCCCh--hhHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-chhHHHHHHHHHhhcCCCCCHHH
Q 013728          174 -------------FPVNFPGT--TFYKSIRAADAIREELIKLIAKQTREAL---GS-KQDLLSRLVVIADSNGKFLTEME  234 (437)
Q Consensus       174 -------------~~~~~p~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~-~~~~l~~ll~~~~~~~~~lt~~~  234 (437)
                                   +..++|..  ..++.....+.+.+.+.+++++ +++..   +. ..|+++.+++..   +..+++++
T Consensus       168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~~  243 (456)
T 3mdm_A          168 KLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQR-RREALKRGEEVPADILTQILKAE---EGAQDDEG  243 (456)
T ss_dssp             HHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTCCCCCCHHHHHHHHT---SSCSSSHH
T ss_pred             HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhccccchhhHHHHHHHhc---CCCCCHHH
Confidence                         01122221  1122334555666677777776 54422   22 568999999764   22488999


Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc
Q 013728          235 VADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI  314 (437)
Q Consensus       235 i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  314 (437)
                      +.+++.++++||+|||+++++|++++|++||++|+|+++|++++++   ..+.++++++++||||+|||+|+||++|+++
T Consensus       244 l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~  320 (456)
T 3mdm_A          244 LLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG---SKRYLDFEDLGRLQYLSQVLKESLRLYPPAW  320 (456)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT---TCSSCCHHHHHHCHHHHHHHHHHHHHCCSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcC---CCCCCCHHHHhcCHHHHHHHHHHHHhCCCcc
Confidence            9999999999999999999999999999999999999999999986   3467999999999999999999999999999


Q ss_pred             ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCCCCCccHHHHHHHHH
Q 013728          315 GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREG-ATPYSYVPFGGGPRMCPGYEFERLLIL  393 (437)
Q Consensus       315 ~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~-~~~~~~~~FG~G~~~C~G~~~a~~~~~  393 (437)
                      .+.|.+.+|++++||.|||||.|+++.+++||||++||||++|+||||++.. .....++|||+|+|.|+|+++|.+|++
T Consensus       321 ~~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~  400 (456)
T 3mdm_A          321 GTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVK  400 (456)
T ss_dssp             CEEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSCCCSSSCCTTCCGGGSCTTHHHHHHHHH
T ss_pred             ccccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCCCCCCcccCCCCCCcCCCCHHHHHHHHH
Confidence            8889999999999999999999999999999999999999999999999764 345679999999999999999999999


Q ss_pred             HHHHHHHhhCceEeeCCC-CCcccccccCCCCCccEEEeeccC
Q 013728          394 VFIHNMIKRFKWDLLIPD-EKFGYDPMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       394 ~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r~~  435 (437)
                      ++++.|+++|++++.++. .++....+..|+++++|++++|..
T Consensus       401 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~  443 (456)
T 3mdm_A          401 VVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRGW  443 (456)
T ss_dssp             HHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECCC
T ss_pred             HHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcCC
Confidence            999999999999997543 233334577899999999999964


No 24 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=9e-64  Score=486.46  Aligned_cols=387  Identities=21%  Similarity=0.310  Sum_probs=294.0

Q ss_pred             CCCCCCCCCcc-cccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhccccccc-ceecc
Q 013728           34 PNPHLPPGNLG-WPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENK-LVRTW  111 (437)
Q Consensus        34 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~-~~~~~  111 (437)
                      ...+.||||++ +|++||++++.     .+++.++.+|+++||+ ||++++++.++++++||+.++++++++.. .+...
T Consensus        10 ~~~~~pPgp~~~~P~iG~~~~~~-----~~~~~~~~~~~~kyG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~   83 (491)
T 3dax_A           10 RQTGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKF   83 (491)
T ss_dssp             CCTTCCCEEEEEESCTTTTGGGT-----CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHH
T ss_pred             cCCCCCCcCCCcccchhhHHHHh-----hCHHHHHHHHHHhcCC-eEEEEECCeEEEEEcChHHHHHHHcCCccCChHHH
Confidence            44578999998 79999999886     4799999999999999 99999999999999999999999987652 22222


Q ss_pred             ChhhhHhhhccccc-cccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHh---------hc------------
Q 013728          112 WPSSVGKLFKTCLL-MKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATY---------WE------------  169 (437)
Q Consensus       112 ~~~~~~~~~g~~l~-~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~------------  169 (437)
                      ........+|.+++ ..+|+.|+++|+.+ .+.|+...+..+.+.+.+.+.+.++..         |.            
T Consensus        84 ~~~~~~~~~g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i  162 (491)
T 3dax_A           84 HFATSAKAFGHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM  162 (491)
T ss_dssp             HHHHHHHHHTCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHH
Confidence            22233345666655 67889999999988 667888999888888777776665321         11            


Q ss_pred             ------cccccCc-----------------------------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 013728          170 ------GVMSFPV-----------------------------NFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQD  214 (437)
Q Consensus       170 ------~~~~~~~-----------------------------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  214 (437)
                            ..++...                             .+|....++..+..+.+.+.+   +++ +.+..+...|
T Consensus       163 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~d  238 (491)
T 3dax_A          163 FEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHE-NLQKRESISE  238 (491)
T ss_dssp             HHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHH-HHTTCBSCCH
T ss_pred             HHHhHHHHcCcccccccchhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHH-HhhcccchhH
Confidence                  0011100                             011111111111111111111   111 2111112568


Q ss_pred             HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccC-------CC
Q 013728          215 LLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQG-------EL  287 (437)
Q Consensus       215 ~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~-------~~  287 (437)
                      +++.+++..++.+ .++++++.++++.+++||+|||+++++|++++|++||++|+|+++||+++++..+..       ..
T Consensus       239 ~l~~ll~~~~~~~-~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~  317 (491)
T 3dax_A          239 LISLRMFLNDTLS-TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPIC  317 (491)
T ss_dssp             HHHHHHHHHHHHB-CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCC
T ss_pred             HHHHHHHHHHhcC-CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccc
Confidence            9998887655433 389999999999999999999999999999999999999999999999998732111       14


Q ss_pred             CCHHHhhcChHHHHHHHHhhcCCCCCccccccccccccc----CCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCC
Q 013728          288 LKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTY----SGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFE  363 (437)
Q Consensus       288 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  363 (437)
                      ++++++++||||+|||+|+||++|+ +.++|.+.+|+++    +||.|||||.|+++.+++|+||++|+||++|+||||+
T Consensus       318 ~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl  396 (491)
T 3dax_A          318 LSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL  396 (491)
T ss_dssp             CCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTB
T ss_pred             cCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcCCcccc
Confidence            6999999999999999999999974 6788999999999    6899999999999999999999999999999999999


Q ss_pred             CCCC------------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC---CCccc---cc-ccCCCC
Q 013728          364 REGA------------TPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD---EKFGY---DP-MLSPSQ  424 (437)
Q Consensus       364 ~~~~------------~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~---~~~~~---~~-~~~~~~  424 (437)
                      +++.            .+..++|||+|+|.|+|+++|.+|++++++.|+++||+++.++.   +.+..   .. +..|+.
T Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~  476 (491)
T 3dax_A          397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLN  476 (491)
T ss_dssp             CTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSS
T ss_pred             CCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCC
Confidence            6431            24679999999999999999999999999999999999997653   12221   21 457788


Q ss_pred             CccEEEeec
Q 013728          425 GLPIRLQPH  433 (437)
Q Consensus       425 ~~~v~~~~r  433 (437)
                      ++.|++++.
T Consensus       477 ~~~~~~r~~  485 (491)
T 3dax_A          477 DIEFKYKFK  485 (491)
T ss_dssp             CCEEEEEEC
T ss_pred             CceEEEEec
Confidence            888888764


No 25 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=1.3e-62  Score=476.34  Aligned_cols=379  Identities=20%  Similarity=0.251  Sum_probs=279.2

Q ss_pred             CCCCCCCCCcc-cccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhccccccc-ceecc
Q 013728           34 PNPHLPPGNLG-WPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENK-LVRTW  111 (437)
Q Consensus        34 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~-~~~~~  111 (437)
                      ...+.||||++ +|++||++.+.+     +++.++.+|+++||+ ||++++++.++++++|++.++++++++.. .+...
T Consensus        15 ~~~~~pPgp~~~~P~iG~~~~~~~-----~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~~   88 (475)
T 3b98_A           15 RRRNEPPLDKGMIPWLGHALEFGK-----DAAKFLTRMKEKHGD-IFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTSY   88 (475)
T ss_dssp             CCTTCCCEECCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS-EEEEEETTEEEEEECCTTTHHHHHTCTTTEESHHH
T ss_pred             cCCCCCCCCCCCcchHHhHHHHhh-----CHHHHHHHHHHHhCC-eEEEEECCceEEEEeCHHHHHHHHcCcccCCchHH
Confidence            34578999998 899999999874     799999999999999 99999999999999999999999987653 11222


Q ss_pred             ChhhhHhhhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc----------------------
Q 013728          112 WPSSVGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE----------------------  169 (437)
Q Consensus       112 ~~~~~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------------  169 (437)
                      ....+..++|.+++..+++.|   |+.+ .+.|++..++.+.+.+.+.+.++++....                      
T Consensus        89 ~~~~~~~~~g~~~~~~~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (475)
T 3b98_A           89 AQVLMKRIFNMILPSHNPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFK  164 (475)
T ss_dssp             HHHHHHHTTCCCCTTCCHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHH
Confidence            223334456666666677665   4566 66789999999999999888888763210                      


Q ss_pred             ----cccccCccCCCh-hhHHHHHH-----------------------HHHHHHHHHHHHHHHHHHhcCC-chhHHHHHH
Q 013728          170 ----GVMSFPVNFPGT-TFYKSIRA-----------------------ADAIREELIKLIAKQTREALGS-KQDLLSRLV  220 (437)
Q Consensus       170 ----~~~~~~~~~p~~-~~~~~~~~-----------------------~~~~~~~~~~~i~~~~~~~~~~-~~~~l~~ll  220 (437)
                          ..+..+.  ... ........                       .....+.+.+.+.+ ....... ..|+++.++
T Consensus       165 ~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~l~~ll  241 (475)
T 3b98_A          165 TGYLTVFGAEN--NNSAALTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTP-SGLDRKPREQSWLGSYV  241 (475)
T ss_dssp             HHHHHHHCCTT--SCHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHSC-TTSCCCCCTTSHHHHHH
T ss_pred             HhhhheeCCcc--ccchhcHHHHHHHHHHHhhhHHHHHHhcChhhhHHHHHHHHHHHHHHHH-HHhhccccccHHHHHHH
Confidence                0011000  000 00000000                       00111111111111 0000112 568999998


Q ss_pred             HHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHH
Q 013728          221 VIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTW  300 (437)
Q Consensus       221 ~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~  300 (437)
                      +..++.+ .++++++. .++.+++||+|||+++++|++++|++||++|+|+++|++.  +    ...++.+++++||||+
T Consensus       242 ~~~~~~~-~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~--~----~~~~~~~~~~~lpyl~  313 (475)
T 3b98_A          242 KQLQDEG-IDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG--G----KHLRLEERQKNTPVFD  313 (475)
T ss_dssp             HHHHHTT-CCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------------CCHHHH
T ss_pred             HHHHHcC-CCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc--C----CCCCCHHHHhcCHHHH
Confidence            8765544 47888888 8899999999999999999999999999999999999982  2    2346899999999999


Q ss_pred             HHHHHhhcCCCCCccccccccccccc-----CCeeeCCCCEEeecccc-ccCCCCCCCCCCCCCCCCCCCCCC-------
Q 013728          301 NVASEVMRLSPPAIGAFREALVDFTY-----SGYTIPKGWKLHWSTGS-THKDETLFPNPETFDASRFEREGA-------  367 (437)
Q Consensus       301 a~i~E~lRl~p~~~~~~R~~~~d~~i-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~F~P~R~l~~~~-------  367 (437)
                      |||+|+||++|+ +.++|.+.+|+++     +||.||||+.|+++.++ +||||++|+||++|+||||++.+.       
T Consensus       314 a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~  392 (475)
T 3b98_A          314 SVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFF  392 (475)
T ss_dssp             HHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSCBCCCCB
T ss_pred             HHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCCcccccc
Confidence            999999999986 7788999999999     88999999999999999 999999999999999999986531       


Q ss_pred             -----CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCC-CCccc-----c-cccCCCCCccEEEeecc
Q 013728          368 -----TPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPD-EKFGY-----D-PMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       368 -----~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~~-----~-~~~~~~~~~~v~~~~r~  434 (437)
                           ....++|||+|+|.|+|+++|.+|++++++.|+++|++++.++. .....     . .+..|..+++|++++|+
T Consensus       393 ~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R~  471 (475)
T 3b98_A          393 KNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRF  471 (475)
T ss_dssp             SSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEEC-
T ss_pred             ccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEEecc
Confidence                 24679999999999999999999999999999999999997653 11211     1 24567889999999985


No 26 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=1.5e-61  Score=471.55  Aligned_cols=388  Identities=19%  Similarity=0.275  Sum_probs=286.0

Q ss_pred             CCCCCCCCCcc-cccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhccccccc--ceec
Q 013728           34 PNPHLPPGNLG-WPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENK--LVRT  110 (437)
Q Consensus        34 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~--~~~~  110 (437)
                      ...+.||||++ +|++||++++.+     +++.++.+|+++||+ ||++++++.++++++|+++++++++++..  .+..
T Consensus        15 ~~~~~PPgp~~~~P~iG~~~~~~~-----~~~~~~~~l~~kYG~-i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~   88 (498)
T 3b6h_A           15 RRPGEPPLDLGSIPWLGYALDFGK-----DAASFLTRMKEKHGD-IFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHA   88 (498)
T ss_dssp             CCTTCCCEECCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCH
T ss_pred             cCCCCCCCCCCCCcchhhHHHhcc-----CHHHHHHHHHHHcCC-eEEEEECCeeEEEEcCHHHHHHHHhCccccCCchh
Confidence            35578999998 799999999974     689999999999999 99999999999999999999999987653  2333


Q ss_pred             cChhhhHhhhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHh-------hc--------------
Q 013728          111 WWPSSVGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATY-------WE--------------  169 (437)
Q Consensus       111 ~~~~~~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~--------------  169 (437)
                      .........+|.+++..+|+.|+   +.+ .+.|+...++.+.+.+.+.+.+.+...       |.              
T Consensus        89 ~~~~~~~~~~g~~~~~~~~~~~r---r~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~  164 (498)
T 3b6h_A           89 YAIFLMERIFDVQLPHYSPSDEK---ARM-KLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLR  164 (498)
T ss_dssp             HHHHHHHHTSCCCCTTCCHHHHH---HHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHcCCCccccCHHHHH---HHH-HHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHH
Confidence            22233445566665566777764   444 457788888888877777666665421       11              


Q ss_pred             ----cccccCccCCCh-----hh---HHHHH-----------------------HHHHHHHHHHHHHHHHHHHhcCCchh
Q 013728          170 ----GVMSFPVNFPGT-----TF---YKSIR-----------------------AADAIREELIKLIAKQTREALGSKQD  214 (437)
Q Consensus       170 ----~~~~~~~~~p~~-----~~---~~~~~-----------------------~~~~~~~~~~~~i~~~~~~~~~~~~~  214 (437)
                          .+++........     ..   .....                       ......+.+.+.+.+.+.+..+...|
T Consensus       165 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  244 (498)
T 3b6h_A          165 AGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSK  244 (498)
T ss_dssp             HHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTCHHHHTTCBSCCH
T ss_pred             HHHHhhcCcccccccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence                011111000000     00   00000                       00011111111111101111112568


Q ss_pred             HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhccc----CCCCCH
Q 013728          215 LLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQ----GELLKW  290 (437)
Q Consensus       215 ~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~----~~~~~~  290 (437)
                      +++.+++..++.+ .++++++. .++.+++||++||+++++|++++|++||++|+|+++||+++++..+.    ...++.
T Consensus       245 ~l~~ll~~~~~~~-~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~  322 (498)
T 3b6h_A          245 WLESYLLHLEEMG-VSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQ  322 (498)
T ss_dssp             HHHHHHHHHHHTT-CCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCT
T ss_pred             HHHHHHHHHHhCC-CCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCH
Confidence            9999988765544 37777777 88888899999999999999999999999999999999999873211    013689


Q ss_pred             HHhhcChHHHHHHHHhhcCCCCCccccccccccccc-----CCeeeCCCCEEeecccc-ccCCCCCCCCCCCCCCCCCCC
Q 013728          291 EDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTY-----SGYTIPKGWKLHWSTGS-THKDETLFPNPETFDASRFER  364 (437)
Q Consensus       291 ~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~F~P~R~l~  364 (437)
                      +++++||||+|||+|+||++|+ +.++|.+.+|+++     +||.|||||.|+++.++ +|+||++|+||++|+||||++
T Consensus       323 ~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~F~PeRfl~  401 (498)
T 3b6h_A          323 KVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLN  401 (498)
T ss_dssp             HHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBC
T ss_pred             HHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhhcCcccccC
Confidence            9999999999999999999984 6788999999988     68999999999999999 999999999999999999996


Q ss_pred             CCC------------CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCCCC---Ccc---ccc-ccCCCCC
Q 013728          365 EGA------------TPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIPDE---KFG---YDP-MLSPSQG  425 (437)
Q Consensus       365 ~~~------------~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~---~~~---~~~-~~~~~~~  425 (437)
                      .+.            .+..++|||+|+|.|||++||.+|++++++.|+++||+++.++..   ...   ... +..|..+
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  481 (498)
T 3b6h_A          402 PDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHD  481 (498)
T ss_dssp             TTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSC
T ss_pred             CCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCC
Confidence            431            245799999999999999999999999999999999999976531   121   112 4567788


Q ss_pred             ccEEEeecc
Q 013728          426 LPIRLQPHQ  434 (437)
Q Consensus       426 ~~v~~~~r~  434 (437)
                      ++|++++|.
T Consensus       482 ~~~~~~~~~  490 (498)
T 3b6h_A          482 VPVRYRIRP  490 (498)
T ss_dssp             CEEEEEECC
T ss_pred             ccEEEEecc
Confidence            999999885


No 27 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=4.9e-61  Score=456.73  Aligned_cols=359  Identities=18%  Similarity=0.266  Sum_probs=294.5

Q ss_pred             cccccchHHHHhhccCCCchHHHHHHHHhhC-CceEEEeeCCCcEEEEeCcchhhhcccccccceec--cChh-hhHhhh
Q 013728           45 WPVIGETLGFIRAGFEGKPERFIRERMEKYD-SRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRT--WWPS-SVGKLF  120 (437)
Q Consensus        45 ~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~--~~~~-~~~~~~  120 (437)
                      .|++||+..+.+     +++.++.+++++|| | ||++++++.+++++++++.++.++.. . .+..  ..+. ....++
T Consensus         8 ~P~lG~~~~~~~-----~p~~~~~~l~~~yg~p-v~~~~~~g~~~v~v~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~   79 (417)
T 1izo_A            8 DKSLDNSLTLLK-----EGYLFIKNRTERYNSD-LFQARLLGKNFICMTGAEAAKVFYDT-D-RFQRQNALPKRVQKSLF   79 (417)
T ss_dssp             CCCTTHHHHHHH-----HGGGHHHHHHHHTTSS-EEEEEETTEEEEEECSHHHHHHHTCT-T-TEECTTCSCHHHHTTTT
T ss_pred             CCccchHHHHhh-----CcHHHHHHHHHHhCCC-eEEeecCCccEEEECCHHHHHHHhcc-c-ccccccccccchhhhhc
Confidence            389999999985     79999999999998 7 99999988999999999999876653 3 2332  2222 233456


Q ss_pred             cc-ccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------------------cccccCcc---
Q 013728          121 KT-CLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------------------GVMSFPVN---  177 (437)
Q Consensus       121 g~-~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~---  177 (437)
                      |. +++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                   .+++.+..   
T Consensus        80 g~~~l~~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~~G~~~~~~~  158 (417)
T 1izo_A           80 GVNAIQGMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETE  158 (417)
T ss_dssp             CTTCGGGCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTT
T ss_pred             cccceeecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHHcCCCCCchH
Confidence            64 77888999999999999 88999999999999999999999874321                   11111110   


Q ss_pred             ----------------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-chhHHHHHHHHHhhcCCCCCHHHHHHHH
Q 013728          178 ----------------FPGTTFYKSIRAADAIREELIKLIAKQTREALG-S-KQDLLSRLVVIADSNGKFLTEMEVADNI  239 (437)
Q Consensus       178 ----------------~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~l~~ll~~~~~~~~~lt~~~i~~~~  239 (437)
                                      ...+...+..++...+.+++.++|++ +++... . ..|+++.|++..+++|..++++++...+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~~~d~l~~ll~~~~~~g~~l~~~~~~~~~  237 (417)
T 1izo_A          159 VKERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIED-ARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIEL  237 (417)
T ss_dssp             HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHH-HHTTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcccCCccchhHHHHHHHHHHHHHHHHHH-HHhhccCCCcCCHHHHHHHhccccCCCCCHHHHHHHH
Confidence                            01122234456667788888888887 665432 2 5689999997655556568888887777


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccc
Q 013728          240 LLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFRE  319 (437)
Q Consensus       240 ~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~  319 (437)
                      ..++ ||++||+++++|++++|++||++|+|+++|                    ++|||++||+|+||++|+++.++|.
T Consensus       238 ~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E--------------------~~~~l~a~i~E~lRl~p~~~~~~R~  296 (417)
T 1izo_A          238 INVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG--------------------NSREREMFVQEVRRYYPFGPFLGAL  296 (417)
T ss_dssp             HHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC--------------------CHHHHHHHHHHHHHHSCCCCEEEEE
T ss_pred             HHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc--------------------CCHHHHHHHHHHhhcCCccccccee
Confidence            6655 999999999999999999999999999987                    2599999999999999999988899


Q ss_pred             cccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC----CCCCccHHHHHHHHHHH
Q 013728          320 ALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGG----PRMCPGYEFERLLILVF  395 (437)
Q Consensus       320 ~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G----~~~C~G~~~a~~~~~~~  395 (437)
                      +.+|++++||.||||+.|+++.+++||||++|+||++|+|+||++.+..+..++|||+|    +|.|+|+++|++|++++
T Consensus       297 ~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~  376 (417)
T 1izo_A          297 VKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKAS  376 (417)
T ss_dssp             ECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCCCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHH
T ss_pred             ecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCCCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999765566789999999    59999999999999999


Q ss_pred             HHHHHhhCceEeeCCCCCccc-ccccCCCCCccEEEeecc
Q 013728          396 IHNMIKRFKWDLLIPDEKFGY-DPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       396 l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~r~  434 (437)
                      ++.|+++|++++.+++..+.. ..+..|+++++|++++|+
T Consensus       377 l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          377 LDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             HHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC
T ss_pred             HHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeCC
Confidence            999999999998755444443 335679999999999985


No 28 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=6.4e-61  Score=457.21  Aligned_cols=360  Identities=18%  Similarity=0.276  Sum_probs=280.6

Q ss_pred             CCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceeccCh-
Q 013728           36 PHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTWWP-  113 (437)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~-  113 (437)
                      .+.||||+++|++|++.....    .+++.++.++ ++||+ ||++++ ++.++++++|++.+++++.++.  |..... 
T Consensus        25 ~~~~PGP~~~p~lG~~~~~~~----~~p~~~~~~l-~~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~   96 (436)
T 2cd8_A           25 QQGTTASPPVLDLGALGQDFA----ADPYPTYARL-RAEGP-AHRVRTPEGDEVWLVVGYDRARAVLADPR--FSKDWRN   96 (436)
T ss_dssp             ---------CCBHHHHHHHHH----HCCHHHHHHH-HTTCS-EEEEECSSCCEEEEECSHHHHHHHHHCTT--EECCGGG
T ss_pred             ccCCCCCCccccCCCCCcccc----cChHHHHHHH-HHhCC-eeeeccCCCCeEEEEcCHHHHHHHHcCCC--Ccccccc
Confidence            367899999999999874333    4799999999 99999 999998 7788999999999999998762  443211 


Q ss_pred             ---hhh--HhhhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhh-c--c-------c-cccC--
Q 013728          114 ---SSV--GKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYW-E--G-------V-MSFP--  175 (437)
Q Consensus       114 ---~~~--~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~--~-------~-~~~~--  175 (437)
                         ...  ....+.+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++... .  .       + ..++  
T Consensus        97 ~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~  175 (436)
T 2cd8_A           97 STTPLTEAEAALNHNMLESDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPIT  175 (436)
T ss_dssp             CSSCCCTTGGGTCCSGGGCCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHH
T ss_pred             cccccccccccccccccccCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHH
Confidence               111  02234578888999999999999 8899999999999999999998887543 1  0       0 0000  


Q ss_pred             -----ccCCChh----------------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHH
Q 013728          176 -----VNFPGTT----------------FYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEME  234 (437)
Q Consensus       176 -----~~~p~~~----------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~  234 (437)
                           +..+...                .++..++...+.+++.+.+++ +++.  ...|+++.|++..++++..+++++
T Consensus       176 vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~~~~~~ls~~e  252 (436)
T 2cd8_A          176 VISELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLIDS-KRGQ--DGEDLLSALVRTSDEDGSRLTSEE  252 (436)
T ss_dssp             HHHHHHTCCGGGHHHHHHHHHHHHSCSSTTHHHHHHHHHHHHHHHHHHH-HTTS--CCCSHHHHHHHHHHHCTTTSCHHH
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH-HhcC--CCCCHHHHHHHhhhccCCCCCHHH
Confidence                 0001000                022344556667777777776 5441  256899999987655455699999


Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc
Q 013728          235 VADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI  314 (437)
Q Consensus       235 i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  314 (437)
                      +.+++.++++||+|||+++++|++++|++||++|+|+++|+                     .||+|||+|+||++|+++
T Consensus       253 i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~  311 (436)
T 2cd8_A          253 LLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM---------------------TLLDGAVEEMLRYEGPVE  311 (436)
T ss_dssp             HHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSBS
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh---------------------hhHHHHHHHHHHhcCccc
Confidence            99999999999999999999999999999999999999884                     368999999999999999


Q ss_pred             -ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHH
Q 013728          315 -GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLIL  393 (437)
Q Consensus       315 -~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~  393 (437)
                       .++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||      ...++|||+|+|.|+|+++|++|++
T Consensus       312 ~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~~pFG~G~r~C~G~~lA~~e~~  385 (436)
T 2cd8_A          312 SATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRD------TAGHLAFGHGIHFCIGAPLARLEAR  385 (436)
T ss_dssp             SCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCCSTTCCTTHHHHHHHHH
T ss_pred             CceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCC------CCCCCCCCCCCCCCcCHHHHHHHHH
Confidence             899999999999999999999999999999999999999999999995      3579999999999999999999999


Q ss_pred             HHHHHHHhhC-ceEeeCCCCCccc--ccccCCCCCccEEEeecc
Q 013728          394 VFIHNMIKRF-KWDLLIPDEKFGY--DPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       394 ~~l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~r~  434 (437)
                      ++++.|+++| ++++..+...+.+  +....+..+++|++++|+
T Consensus       386 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  429 (436)
T 2cd8_A          386 IAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGR  429 (436)
T ss_dssp             HHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC-----
T ss_pred             HHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecCc
Confidence            9999999999 6998644333333  345678889999999985


No 29 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=1.5e-59  Score=446.24  Aligned_cols=360  Identities=17%  Similarity=0.267  Sum_probs=291.3

Q ss_pred             CCCCcccccccchHHHHhhccCCCchHHHHHHHHhh-CCceEEEeeCCCcEEEEeCcchhhhcccccccceecc--Chh-
Q 013728           39 PPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKY-DSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW--WPS-  114 (437)
Q Consensus        39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~y-G~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~--~~~-  114 (437)
                      ||||   |++||++++..     +++.++.+++++| || ||++.+++.+++++++++.++ ++.++. .|...  .+. 
T Consensus         4 pPg~---P~iG~~~~~~~-----~p~~~~~~l~~~y~gp-v~~~~~~g~~~~vv~~~~~~~-~l~~~~-~f~~~~~~~~~   72 (415)
T 3awm_A            4 TPHT---KGPDETLSLLA-----DPYRFISRQCQRLGAN-AFESRFLLKKTNCLKGAKAAE-IFYDTT-RFEREGAMPVA   72 (415)
T ss_dssp             --------CCCCHHHHHH-----STTTHHHHHHHHHTSS-EEEEEETTEEEEEEESHHHHH-HHTCTT-TEECTTCSCHH
T ss_pred             CCCC---CccchHHHHHh-----ChHHHHHHHHHHhCCC-eEEEecCCCcEEEEeCHHHHH-HHhccc-ccccccccchh
Confidence            6776   89999999984     7999999999999 78 999999888999999999997 565543 34322  222 


Q ss_pred             hhHhhhcc-ccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------------------ccccc
Q 013728          115 SVGKLFKT-CLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------------------GVMSF  174 (437)
Q Consensus       115 ~~~~~~g~-~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------~~~~~  174 (437)
                      ....++|. +++..||+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                   .+++.
T Consensus        73 ~~~~~~g~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~~G~  151 (415)
T 3awm_A           73 IQKTLLGQGGVQGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAWAGV  151 (415)
T ss_dssp             HHTTTSCSSSGGGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             hhhhccCCcceeecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHHcCC
Confidence            22345664 77889999999999999 99999999999999999999988874221                   11111


Q ss_pred             Ccc-------------------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-chhHHHHHHHHHhhcCCCCCHH
Q 013728          175 PVN-------------------FPGTTFYKSIRAADAIREELIKLIAKQTREALG-S-KQDLLSRLVVIADSNGKFLTEM  233 (437)
Q Consensus       175 ~~~-------------------~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~l~~ll~~~~~~~~~lt~~  233 (437)
                      +..                   .+.+...+..++...+.+++.+++++ +++... . ..|+++.|+...++++..++++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~~~~~~~~d~l~~ll~~~~~~g~~~~~~  230 (415)
T 3awm_A          152 PLPDDEAGNRAGELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEG-IRAGSIGSGSGTAAYAIAWHRDRHDDLLSPH  230 (415)
T ss_dssp             CCCGGGHHHHHHHHHHHHHSTTCSSHHHHHHHHHHHHHHHHHHHHHHH-HHHTSSCCCTTSHHHHHHHCBCTTSCBCCHH
T ss_pred             CCCcchHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCCCHHHHHHhhhhccCCCCCHH
Confidence            110                   01222344556677788888888888 665432 2 5689999997655555568998


Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCC
Q 013728          234 EVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPA  313 (437)
Q Consensus       234 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~  313 (437)
                      ++...+..++ ||++||+++++|++++|++||++|+|+++|                     +||+++||+|+||++|++
T Consensus       231 ~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e---------------------~~~l~a~i~E~lRl~p~~  288 (415)
T 3awm_A          231 VAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ---------------------PDYAELFVQEVRRFYPFF  288 (415)
T ss_dssp             HHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC---------------------TTHHHHHHHHHHHHSCCS
T ss_pred             HHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH---------------------HHHHHHHHHHHhhcCCCc
Confidence            8887777655 999999999999999999999999999986                     499999999999999999


Q ss_pred             cccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC----CCCCccHHHHH
Q 013728          314 IGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGG----PRMCPGYEFER  389 (437)
Q Consensus       314 ~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G----~~~C~G~~~a~  389 (437)
                      +.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+||++.+..+..++|||+|    +|.|+|+++|+
T Consensus       289 ~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G~r~~~r~C~G~~lA~  368 (415)
T 3awm_A          289 PAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVL  368 (415)
T ss_dssp             CEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCCCSSSCCTTCCSCTTTSCCCTTHHHHH
T ss_pred             cccceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCCCCCCccCCCCCCCCCCCcCchHHHHH
Confidence            98889999999999999999999999999999999999999999999999775566789999999    59999999999


Q ss_pred             HHHHHHHHHHHhhCceEeeCCCCCccc-ccccCCCCCccEEEeec
Q 013728          390 LLILVFIHNMIKRFKWDLLIPDEKFGY-DPMLSPSQGLPIRLQPH  433 (437)
Q Consensus       390 ~~~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~r  433 (437)
                      +|++++++.|+++|++++.+++.++.. ..+..|+++++|++++.
T Consensus       369 ~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          369 AIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             HHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEES
T ss_pred             HHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeC
Confidence            999999999999999998755444443 34567999999999864


No 30 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=1.3e-58  Score=437.77  Aligned_cols=352  Identities=19%  Similarity=0.215  Sum_probs=283.4

Q ss_pred             cCCCCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEe----e-CC-CcEEEEeCcchhhhcc-cc
Q 013728           31 KIYPNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTC----L-LG-EDMIVFCGTAGHKLLF-SN  103 (437)
Q Consensus        31 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~----~-~~-~~~v~v~~~~~i~~i~-~~  103 (437)
                      ..+...++||||+++|+.     +.     .+++.++.+| ++||+ ||+++    + ++ .++++++|++.+++++ .+
T Consensus         4 ~~~~~~~lppgp~~~p~~-----~~-----~~p~~~~~~l-~~yGp-v~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~   71 (406)
T 1ued_A            4 DIDQVAPLLREPANFQLR-----TN-----CDPHEDNFGL-RAHGP-LVRIVGESSTQLGRDFVWQAHGYEVVRRILGDH   71 (406)
T ss_dssp             CCCSCCCEEECCTTTTCE-----ET-----TEECHHHHHH-HTTCS-EEEEESHHHHHTTSSCEEEECSHHHHHHHHHCC
T ss_pred             ccCCCCCCcccCcccCCC-----CC-----CCcHHHHHHH-HHhCC-eeeecccccCCCCCccEEEEcCHHHHHHHHhhC
Confidence            345567899999999987     22     5799999999 99999 99999    7 78 8999999999999999 65


Q ss_pred             cccceeccC-h-h--hhHh--hhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------
Q 013728          104 ENKLVRTWW-P-S--SVGK--LFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------  169 (437)
Q Consensus       104 ~~~~~~~~~-~-~--~~~~--~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------  169 (437)
                      +. +.+... . .  .+..  ..+.+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....        
T Consensus        72 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~  149 (406)
T 1ued_A           72 EH-FTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQ  149 (406)
T ss_dssp             SS-EECCCCC---------CGGGTTCGGGCCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHH
T ss_pred             cc-ccccccccccccccccccccccccccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHH
Confidence            54 222111 1 1  1111  133477788999999999999 88999999999999999999888874321        


Q ss_pred             -------------cccccCc------------cCC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 013728          170 -------------GVMSFPV------------NFP-GTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIA  223 (437)
Q Consensus       170 -------------~~~~~~~------------~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~  223 (437)
                                   .+++.+.            .+. ....++..++.+.+.+++.+.+++ +++.  ...|+++.|++..
T Consensus       150 ~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~  226 (406)
T 1ued_A          150 GLFADPVGAHALCELLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLAR-QRAD--PDDGLLGMIVRDH  226 (406)
T ss_dssp             HHTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHHH
T ss_pred             HHHHHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhc
Confidence                         0011110            000 011234455667777888888877 6552  2578999999765


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHH
Q 013728          224 DSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVA  303 (437)
Q Consensus       224 ~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i  303 (437)
                         +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+.                     |++|||
T Consensus       227 ---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~a~i  282 (406)
T 1ued_A          227 ---GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE---------------------KAERVV  282 (406)
T ss_dssp             ---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH---------------------HHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH---------------------HHHHHH
Confidence               23499999999999999999999999999999999999999999999853                     579999


Q ss_pred             HHhhcCCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCC
Q 013728          304 SEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMC  382 (437)
Q Consensus       304 ~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C  382 (437)
                      +|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||      ...++|||.|+|.|
T Consensus       283 ~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~pFG~G~r~C  356 (406)
T 1ued_A          283 NELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA------AVSDVGFGHGIHYC  356 (406)
T ss_dssp             HHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC------CCCCCTTCCSTTSC
T ss_pred             HHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC------CCCCCCCCCCCcCC
Confidence            99999999999 489999999999999999999999999999999999999999999997      35689999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCcc--cccccCCCCCccEEE
Q 013728          383 PGYEFERLLILVFIHNMIKRF-KWDLLIPDEKFG--YDPMLSPSQGLPIRL  430 (437)
Q Consensus       383 ~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~--~~~~~~~~~~~~v~~  430 (437)
                      +|+++|++|++++++.|+++| ++++.++..+++  .+.+.++ .+++|++
T Consensus       357 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          357 VGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             CcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence            999999999999999999999 799975544433  3456778 8888874


No 31 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=1.8e-58  Score=437.31  Aligned_cols=338  Identities=20%  Similarity=0.283  Sum_probs=279.0

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh-------hhhHhhhccccccccChHHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP-------SSVGKLFKTCLLMKAGDDAK  133 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~-------~~~~~~~g~~l~~~~g~~~~  133 (437)
                      .+++.++.++ ++||| ||++++++.++++++|++.+++++++++ .+.+...       ..+....|.+++..+|+.|+
T Consensus        13 ~~p~~~~~~~-r~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   89 (404)
T 3ejb_B           13 KNPYSFYDTL-RAVHP-IYKGSFLKYPGWYVTGYEETAAILKDAR-FKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHR   89 (404)
T ss_dssp             HCHHHHHHHH-HHHCS-EEEEEETTEEEEEECCHHHHHHHHHCTT-EECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHH
T ss_pred             cCchHHHHHH-HhhCC-EeeccCCCCCEEEEecHHHHHHHHhCcc-cccCcccccccccccchhhhhhcchhhcCCchHH
Confidence            4799999998 58999 9999999999999999999999999775 4543321       22334456688889999999


Q ss_pred             HHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCc-----------------
Q 013728          134 RMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPV-----------------  176 (437)
Q Consensus       134 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~-----------------  176 (437)
                      ++|+.+ .+.|++.+++.+.+.+.+.++++++....                    .+++.+.                 
T Consensus        90 ~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~  168 (404)
T 3ejb_B           90 RLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTI  168 (404)
T ss_dssp             HHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHGGG
T ss_pred             HHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Confidence            999999 88999999999999999999999874322                    0001110                 


Q ss_pred             cCCCh--hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHH
Q 013728          177 NFPGT--TFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAI  254 (437)
Q Consensus       177 ~~p~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l  254 (437)
                      ..|..  ..++..+....+.+++.+.+++ +++  +...|+++.++ . +.++..++++++.+++..+++||+|||++++
T Consensus       169 ~~p~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~--~~~~d~l~~ll-~-~~~~~~ls~~el~~~~~~l~~AG~dTta~~l  243 (404)
T 3ejb_B          169 DFTRSRKALTEGNIMAVQAMAYFKELIQK-RKR--HPQQDMISMLL-K-GREKDKLTEEEAASTCILLAIAGHETTVNLI  243 (404)
T ss_dssp             STTCCHHHHHHHHHHHHHHHHHHHHHHHH-HHH--SCCSSHHHHHH-H-C----CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHh--CCcchHHHHHH-h-cccCCCCCHHHHHHHHHHHHHcchHHHHHHH
Confidence            01211  2344556677788888888887 654  12678999999 3 3344459999999999999999999999999


Q ss_pred             HHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCC
Q 013728          255 TLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKG  334 (437)
Q Consensus       255 ~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G  334 (437)
                      +|++++|++||++|+|+++|++                     |++++|+|+||++|+++.++|.+.+|++++||.||||
T Consensus       244 ~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~G  302 (404)
T 3ejb_B          244 SNSVLCLLQHPEQLLKLRENPD---------------------LIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQG  302 (404)
T ss_dssp             HHHHHHHHTCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSBCEEEEEESSCEEETTEEECTT
T ss_pred             HHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCcccccceEeCCCeEECCEEECCC
Confidence            9999999999999999999863                     6799999999999999988999999999999999999


Q ss_pred             CEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCC
Q 013728          335 WKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEK  413 (437)
Q Consensus       335 ~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~  413 (437)
                      +.|.++.+++||||++|+||++|+|+||      ...++|||+|+|.|+|+++|.+|++++++.|+++| ++++.+++..
T Consensus       303 t~v~~~~~~~~rdp~~~~dp~~F~p~R~------~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~  376 (404)
T 3ejb_B          303 EQVYLLLGAANRDPSIFTNPDVFDITRS------PNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWR  376 (404)
T ss_dssp             CEEEEEHHHHTTCTTTSSSTTSCCTTCS------SCCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--CCC
T ss_pred             CEEEecHHHhCCChhhCCCcceeCCCCC------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCCCce
Confidence            9999999999999999999999999997      34589999999999999999999999999999999 9999754455


Q ss_pred             cccccccCCCCCccEEEeecc
Q 013728          414 FGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       414 ~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      +..+...++...++|+++||.
T Consensus       377 ~~~~~~~~~~~~lpv~~~~~~  397 (404)
T 3ejb_B          377 YRPLFGFRALEELPVTFEASW  397 (404)
T ss_dssp             BCSCSSBCCBSCCEEECC---
T ss_pred             eccCcccCCcceeEEEEeccc
Confidence            555667889999999999873


No 32 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=3.5e-58  Score=435.25  Aligned_cols=352  Identities=16%  Similarity=0.189  Sum_probs=275.0

Q ss_pred             CCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeC-CCcEEEEeCcchhhhcccccccceecc---Ch
Q 013728           38 LPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLL-GEDMIVFCGTAGHKLLFSNENKLVRTW---WP  113 (437)
Q Consensus        38 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~-~~~~v~v~~~~~i~~i~~~~~~~~~~~---~~  113 (437)
                      .||||+++|++|++.        .+|+..+.+|+ +||+ |+++.+. |...+++++++.+++++.++.......   +.
T Consensus         2 ~pPGp~~~P~~g~~~--------~~p~~~~~~l~-~~Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~   71 (404)
T 1jfb_A            2 MASGAPSFPFSRASG--------PEPPAEFAKLR-ATNP-VSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFP   71 (404)
T ss_dssp             ----CCBSSCCCSST--------TSCCTHHHHHH-HHCS-EEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCC
T ss_pred             CCCCCCCCCCCCCcC--------CCccHHHHHHH-HhCC-eeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCc
Confidence            599999999999865        36889999995 6999 9999875 677788999999999998764111111   11


Q ss_pred             h--hh--Hhhhcc-ccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------------------
Q 013728          114 S--SV--GKLFKT-CLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------------------  169 (437)
Q Consensus       114 ~--~~--~~~~g~-~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------  169 (437)
                      .  ..  ....+. +++..+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....                   
T Consensus        72 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~  150 (404)
T 1jfb_A           72 ELSASGKQAAKAKPTFVDMDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVP  150 (404)
T ss_dssp             CCSHHHHHHTTSCCCGGGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHH
T ss_pred             cccccccchhcccCcccccCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHH
Confidence            1  00  112333 67788999999999999 88999999999999999999888874321                   


Q ss_pred             -----cccccCcc------------CC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCC
Q 013728          170 -----GVMSFPVN------------FP-GTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLT  231 (437)
Q Consensus       170 -----~~~~~~~~------------~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt  231 (437)
                           .+++.+..            .. ....++..++...+.+++.+.+++ +++.  ...|+++.|++...+ +..++
T Consensus       151 ~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~~-~~~l~  226 (404)
T 1jfb_A          151 SYIIYTLLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQ-RLVE--PKDDIISKLCTEQVK-PGNID  226 (404)
T ss_dssp             HHHHHHHHTCCGGGHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHHTTT-TTSSC
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHH-HHhC--CCCcHHHHHHHhhcc-CCCCC
Confidence                 01111110            00 011234445666777888888877 6552  267899999965432 33599


Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCC
Q 013728          232 EMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSP  311 (437)
Q Consensus       232 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p  311 (437)
                      ++++.+++..+++||+|||+++++|++++|++||++|+|++++                     .+|++|||+|+||++|
T Consensus       227 ~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~---------------------~~yl~a~i~E~lRl~p  285 (404)
T 1jfb_A          227 KSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN---------------------PSLAPQFVEELCRYHT  285 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC---------------------GGGHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC---------------------hHhHHHHHHHHHhhCC
Confidence            9999999999999999999999999999999999999999972                     2799999999999999


Q ss_pred             CCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHH
Q 013728          312 PAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERL  390 (437)
Q Consensus       312 ~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~  390 (437)
                      +++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.    ..++|||.|+|.|+|+++|++
T Consensus       286 ~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~----~~~~~Fg~G~r~C~G~~lA~~  361 (404)
T 1jfb_A          286 ASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP----QDPLGFGFGDHRCIAEHLAKA  361 (404)
T ss_dssp             SCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS----SCCCTTCCGGGSCTTHHHHHH
T ss_pred             CccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC----CCCCCCCCCCccCCCHHHHHH
Confidence            999 789999999999999999999999999999999999999999999999743    359999999999999999999


Q ss_pred             HHHHHHHHHHhhC-ceEeeCCCCCccc--ccccCCCCCccEE
Q 013728          391 LILVFIHNMIKRF-KWDLLIPDEKFGY--DPMLSPSQGLPIR  429 (437)
Q Consensus       391 ~~~~~l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~v~  429 (437)
                      |++++++.|+++| ++++.++...+.+  +...+....++|+
T Consensus       362 e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~  403 (404)
T 1jfb_A          362 ELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVI  403 (404)
T ss_dssp             HHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEE
T ss_pred             HHHHHHHHHHHHCCCceecCCcccccccccccccCcccceee
Confidence            9999999999999 7998754433332  3334455555554


No 33 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=2.1e-59  Score=441.00  Aligned_cols=354  Identities=19%  Similarity=0.217  Sum_probs=270.3

Q ss_pred             CCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC--hhhhHh
Q 013728           41 GNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW--PSSVGK  118 (437)
Q Consensus        41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~--~~~~~~  118 (437)
                      +++.+|++||++.+.+     +++.++.+|+++||+ ||+ ++++.++++++|++.+++++.++  .|....  ......
T Consensus         3 ~~~~~p~iGnl~~~~~-----~p~~~~~~l~~~yGp-v~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~   73 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQ-----DPLAVLLAWGRAHPR-LFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSR   73 (389)
T ss_dssp             ECCHHHHHHHHHHHHH-----CHHHHHHHHHHHCSE-EEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHH
T ss_pred             ccccccccccHHHHhh-----ChHHHHHHHHHHcCC-eeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHH
Confidence            4566799999999874     799999999999999 999 99889999999999999999876  344332  233445


Q ss_pred             hhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------------------cccccCccCC
Q 013728          119 LFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------------------GVMSFPVNFP  179 (437)
Q Consensus       119 ~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~p  179 (437)
                      ++|.+++..+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....                   .+++.+..  
T Consensus        74 ~~g~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~dl~~~~~~~~~~vi~~~~fG~~~~--  150 (389)
T 1n97_A           74 LTGRGLLTDWGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLS--  150 (389)
T ss_dssp             HHCSSTTTCCHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             HhCCccccCCcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHccCCcCcHHHHHHHHHHHHHHHHHcCCcch--
Confidence            567788888999999999999 88999999999999999999999984211                   01111111  


Q ss_pred             ChhhHHHHHHHHHHHHHHH-HHHH------HHHHHhcCCchhHHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHhhhhhH
Q 013728          180 GTTFYKSIRAADAIREELI-KLIA------KQTREALGSKQDLLSRLVVIADSNG--KFLTEMEVADNILLLLFSSHDTS  250 (437)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~-~~i~------~~~~~~~~~~~~~l~~ll~~~~~~~--~~lt~~~i~~~~~~~~~ag~~tt  250 (437)
                        .  +.......+...+. ....      .............+..++...-+..  ..++++++.+++..+++||+|||
T Consensus       151 --~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~rll~~l~~~~l~~~~~~~~~aG~~Tt  226 (389)
T 1n97_A          151 --P--SLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETV  226 (389)
T ss_dssp             --H--HHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHHHHHHHHSHHH
T ss_pred             --H--HHHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHcCchhH
Confidence              0  11111111111110 0000      0000000000001111111110000  13899999999999999999999


Q ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCee
Q 013728          251 SSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYT  330 (437)
Q Consensus       251 ~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~  330 (437)
                      +++++|++++|++||++|+|+++|++.+.                     |||+|+||++|+++.++|.+.+|++++||.
T Consensus       227 ~~~l~~~l~~L~~~P~~~~~l~~E~~~~~---------------------a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~  285 (389)
T 1n97_A          227 ASALTWSFLLLSHRPDWQKRVAESEEAAL---------------------AAFQEALRLYPPAWILTRRLERPLLLGEDR  285 (389)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHCHHHHH---------------------HHHHHHHHHSCSSCCEEEEESSCEEETTEE
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHH---------------------HHHHHHHhcCCCccccceeeCCCceECCEE
Confidence            99999999999999999999999998762                     899999999999998899999999999999


Q ss_pred             eCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCC-CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeC
Q 013728          331 IPKGWKLHWSTGSTHKDETLFPNPETFDASRFERE-GATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLI  409 (437)
Q Consensus       331 ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~-~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  409 (437)
                      ||||+.|.++.+++|||  +|+||++|+||||++. ...+..++|||+|+|.|+|+++|.+|++++++.|+++|++++.+
T Consensus       286 Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  363 (389)
T 1n97_A          286 LPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLP  363 (389)
T ss_dssp             ECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSCCCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             eCCCCEEEECHHHHhhh--cCCCccccCCccCCCCCCCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCC
Confidence            99999999999999999  9999999999999864 23456799999999999999999999999999999999999874


Q ss_pred             CCCCcccccccCCCCCccEEEeecc
Q 013728          410 PDEKFGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      +... ....+..|.++++|++++|.
T Consensus       364 ~~~~-~~~~~~~p~~~~~v~~~~~~  387 (389)
T 1n97_A          364 FPRV-LAQVTLRPEGGLPARPREEV  387 (389)
T ss_dssp             CCCE-EESSSEEETTCCEECCBC--
T ss_pred             CCcc-cceEEeeeCCCceEEEeecc
Confidence            4332 33456778889999999863


No 34 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=5.6e-57  Score=426.70  Aligned_cols=338  Identities=20%  Similarity=0.281  Sum_probs=278.9

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChhh--------hHhhhccccccccChHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSS--------VGKLFKTCLLMKAGDDA  132 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~--------~~~~~g~~l~~~~g~~~  132 (437)
                      .+++.++.+| ++||| ||++++++.++++++|++.+++++.+++  |..+....        +....+.+++..+|+.|
T Consensus        20 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h   95 (411)
T 3a4g_A           20 QNPHPAYAAL-RAEDP-VRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMDPPDH   95 (411)
T ss_dssp             TCCHHHHHHH-HHHCS-EEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTHH
T ss_pred             cCchHHHHHH-HhcCC-eeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCCchHH
Confidence            5899999999 99999 9999999999999999999999998765  44332111        11123457888899999


Q ss_pred             HHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCccCCChh----------
Q 013728          133 KRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPVNFPGTT----------  182 (437)
Q Consensus       133 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~p~~~----------  182 (437)
                      +++|+.+ .+.|++..++.+.+.+.+.++++++....                    .+++.+..- ...          
T Consensus        96 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~-~~~~~~~~~~~~~  173 (411)
T 3a4g_A           96 TRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAED-RDDFSAWSSVLVD  173 (411)
T ss_dssp             HHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHHHTCCGGG-HHHHHHHHHHHTT
T ss_pred             HHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHHhCCCHHH-HHHHHHHHHHHhc
Confidence            9999999 88999999999999999999999984322                    001111100 000          


Q ss_pred             ---hHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 013728          183 ---FYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLK  259 (437)
Q Consensus       183 ---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~  259 (437)
                         ..+..++...+.+++.+.+++ +++.  ...|+++.|++..++++..++++++.+.+..+++||+|||+++++|+++
T Consensus       174 ~~p~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~  250 (411)
T 3a4g_A          174 DSPADDKNAAMGKLHGYLSDLLER-KRTE--PDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVL  250 (411)
T ss_dssp             SSCTTTHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCCCTTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence               012345566777788888877 6552  2568999999765424556999999999999999999999999999999


Q ss_pred             HHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEe
Q 013728          260 YLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLH  338 (437)
Q Consensus       260 ~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~  338 (437)
                      +|++||++|+|+++|+                     .|++|||+|+||++|+++ .++|.+.+|++++||.||||+.|.
T Consensus       251 ~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~  309 (411)
T 3a4g_A          251 ALLTHPDQRKLLAEDP---------------------SLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVM  309 (411)
T ss_dssp             HHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEE
T ss_pred             HHHhCHHHHHHHhcCH---------------------HHHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEE
Confidence            9999999999999984                     378999999999999999 889999999999999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCc--c
Q 013728          339 WSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKF--G  415 (437)
Q Consensus       339 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~--~  415 (437)
                      ++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|+++|++|++++++.|+++| ++++.++..++  .
T Consensus       310 ~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~  383 (411)
T 3a4g_A          310 LGLAAANRDADWMPEPDRLDITRDA------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYR  383 (411)
T ss_dssp             EBHHHHTTCTTTSSSTTSCCTTSCC------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBC
T ss_pred             eChhhhCCChhhcCCccccCCCCCC------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCccccccc
Confidence            9999999999999999999999973      4689999999999999999999999999999999 79997543333  3


Q ss_pred             cccccCCCCCccEEEeecc
Q 013728          416 YDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       416 ~~~~~~~~~~~~v~~~~r~  434 (437)
                      .+.+..+..+++|++++|.
T Consensus       384 ~~~~~~~~~~lpv~~~~r~  402 (411)
T 3a4g_A          384 ESTLVRGLSRMPVTMGPRS  402 (411)
T ss_dssp             CCTTBCCBSCCEEECCCCC
T ss_pred             cCccccCcceeEEEecCcc
Confidence            3456778899999999985


No 35 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=1.5e-57  Score=433.68  Aligned_cols=357  Identities=17%  Similarity=0.229  Sum_probs=282.8

Q ss_pred             CCCCCCCCcccccccchHHHHhhccC-CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceeccC
Q 013728           35 NPHLPPGNLGWPVIGETLGFIRAGFE-GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTWW  112 (437)
Q Consensus        35 ~~~~ppgp~~~p~~G~~~~~~~~~~~-~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~~  112 (437)
                      ..++|||     ++|++.+... ... .+++.++.++++ ||| |+++++ |+.+++++++++.++++++++. .|.++.
T Consensus         4 ~~~~pp~-----~~g~l~~~~~-~~~~~~p~~~~~~l~~-~gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~fs~r~   74 (428)
T 1cpt_A            4 RATIPEH-----IARTVILPQG-YADDEVIYPAFKWLRD-EQP-LAMAHIEGYDPMWIATKHADVMQIGKQPG-LFSNAE   74 (428)
T ss_dssp             TCCSCHH-----HHHHHHSSGG-GGCHHHHHHHHHHHHH-HCS-EEEECCTTSCCEEEECSHHHHHHHHHCTT-TEESSS
T ss_pred             ccccchh-----hhcccCChhh-hcccCCccHHHHHHHH-hCC-eeeccccCCCCeEEEccHHHHHHHHcCch-hccCcc
Confidence            4577888     8887655421 111 258899999876 799 999998 6789999999999999998754 455432


Q ss_pred             h-hhh----H-h-h---hc------cccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------
Q 013728          113 P-SSV----G-K-L---FK------TCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------  169 (437)
Q Consensus       113 ~-~~~----~-~-~---~g------~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------  169 (437)
                      . ..+    . . +   +|      .+++..+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....       
T Consensus        75 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~  153 (428)
T 1cpt_A           75 GSEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDF  153 (428)
T ss_dssp             SCSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEH
T ss_pred             ccccCCcccccchhccccccccccccccccCChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeh
Confidence            2 111    1 2 2   43      367888999999999999 89999999999999999998888864221       


Q ss_pred             --------------cccccC--------------------ccC--CC------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013728          170 --------------GVMSFP--------------------VNF--PG------TTFYKSIRAADAIREELIKLIAKQTRE  207 (437)
Q Consensus       170 --------------~~~~~~--------------------~~~--p~------~~~~~~~~~~~~~~~~~~~~i~~~~~~  207 (437)
                                    .+++.+                    ...  |.      ...++..++...+.+++.+.+++ +++
T Consensus       154 ~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~  232 (428)
T 1cpt_A          154 MTDCALYYPLHVVMTALGVPEDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVD-RRS  232 (428)
T ss_dssp             HHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred             HHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHH-HHc
Confidence                          000000                    000  00      11124455666777778888777 554


Q ss_pred             hcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCC
Q 013728          208 ALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGEL  287 (437)
Q Consensus       208 ~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~  287 (437)
                      .  ...|+++.|++... ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++           
T Consensus       233 ~--~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------  298 (428)
T 1cpt_A          233 C--PKDDVMSLLANSKL-DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA-----------  298 (428)
T ss_dssp             S--CCSSHHHHHHHCBS-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------
T ss_pred             C--CCCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH-----------
Confidence            1  25689999997643 444599999999999999999999999999999999999999999999953           


Q ss_pred             CCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCC
Q 013728          288 LKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGA  367 (437)
Q Consensus       288 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~  367 (437)
                                |++|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||.    
T Consensus       299 ----------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----  364 (428)
T 1cpt_A          299 ----------LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFP----  364 (428)
T ss_dssp             ----------GHHHHHHHHHHHHCCBCCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCS----
T ss_pred             ----------HHHHHHHHHHHhCCcccccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCCC----
Confidence                      789999999999999998899999999999999999999999999999999999999999999985    


Q ss_pred             CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCc-eEeeCCCCCcccccccCCCCCccEEEeec
Q 013728          368 TPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFK-WDLLIPDEKFGYDPMLSPSQGLPIRLQPH  433 (437)
Q Consensus       368 ~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  433 (437)
                        ..++|||+|+|.|+|+++|++|++++++.|+++|+ +++.+ +.....+.......+++|+++||
T Consensus       365 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          365 --NRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG-PPRLVATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             --CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS-CCEECCCSSBCSEEECEEEEEEC
T ss_pred             --CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC-CcccccCccccCcceeeEEeeCC
Confidence              24899999999999999999999999999999997 78763 33333344566777899999886


No 36 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=8.8e-58  Score=432.50  Aligned_cols=362  Identities=17%  Similarity=0.189  Sum_probs=286.3

Q ss_pred             CCCCCCCCCcccccc--cchHHHHhhc-cCCCchHHHHHHHHhhC--CceEEEeeCCCcEEEEeCcchhhhcccccccce
Q 013728           34 PNPHLPPGNLGWPVI--GETLGFIRAG-FEGKPERFIRERMEKYD--SRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLV  108 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~--G~~~~~~~~~-~~~~~~~~~~~~~~~yG--~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~  108 (437)
                      ++.++||||.+.|..  +.+ ++.... +..+++.++.+|+ +||  + ||+++..| ++++++|++.+++++++.+ .|
T Consensus         8 ~~~~~~~~p~~~p~~~~~~~-~~~~~~~~~~~p~~~~~~l~-~~G~~p-v~~~~~~g-~~vvv~~~~~v~~vl~~~~-~f   82 (415)
T 2zwu_A            8 SNANLAPLPPHVPEHLVFDF-DMYNPSNLSAGVQEAWAVLQ-ESNVPD-LVWTRCNG-GHWIATRGQLIREAYEDYR-HF   82 (415)
T ss_dssp             ---CCCCCCTTSCGGGBCCC-CTTSCTTGGGCHHHHHHGGG-STTSCS-EEEECGGG-CEEEECSHHHHHHHHHCTT-TE
T ss_pred             CccccCCCCCCCCccccccc-CcCChhhcccChHHHHHHHH-hcCCCC-eEEecCCC-CeEEEcCHHHHHHHHcCcc-cc
Confidence            567899999999864  432 221111 1257999999995 899  9 99998333 6999999999999998654 45


Q ss_pred             eccC--hhhhHhhhccc-cccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-c-------c-cccC-
Q 013728          109 RTWW--PSSVGKLFKTC-LLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-G-------V-MSFP-  175 (437)
Q Consensus       109 ~~~~--~~~~~~~~g~~-l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-------~-~~~~-  175 (437)
                      ....  .......++.+ ++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.... +       + ..++ 
T Consensus        83 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~  161 (415)
T 2zwu_A           83 SSECPFIPREAGEAYDFIPTSMDPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPI  161 (415)
T ss_dssp             ETTSCSSSHHHHHHCCCTTTTCCTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGGTEEEHHHHTTTHHHH
T ss_pred             CCCcccCCCCccccccccCccCCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence            5432  22222233557 8888999999999999 88889999999999999999999874322 0       0 0000 


Q ss_pred             ------ccCCChhhH----------------HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHH
Q 013728          176 ------VNFPGTTFY----------------KSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEM  233 (437)
Q Consensus       176 ------~~~p~~~~~----------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~  233 (437)
                            +..+.....                +..++...+.+++.+.+++ +++.  ...|+++.|++... ++..++++
T Consensus       162 ~vi~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~l~~~  237 (415)
T 2zwu_A          162 RIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQ-RRQK--PGTDAISIVANGQV-NGRPITSD  237 (415)
T ss_dssp             HHHHHHHTCCGGGHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHTCEE-TTEECCHH
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhhh-cCCCCCHH
Confidence                  011100000                2334556677778888877 6552  25789999987543 34459999


Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCC
Q 013728          234 EVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPA  313 (437)
Q Consensus       234 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~  313 (437)
                      ++.+++..+++||+|||+++++|++++|++||++|+|+++|++                     ||+|||+|+||++|++
T Consensus       238 ~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~  296 (415)
T 2zwu_A          238 EAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE---------------------RIPAACEELLRRFSLV  296 (415)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHTCCB
T ss_pred             HHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHhhcCCc
Confidence            9999999999999999999999999999999999999999952                     7899999999999999


Q ss_pred             cccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHH
Q 013728          314 IGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLIL  393 (437)
Q Consensus       314 ~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~  393 (437)
                      +.+ |.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||      ...++|||+|+|.|+|+++|.+|++
T Consensus       297 ~~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~  369 (415)
T 2zwu_A          297 ADG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ------KVSHTTFGHGSHLCLGQHLARREII  369 (415)
T ss_dssp             CCE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCS------SCCCCTTCCGGGCCSSHHHHHHHHH
T ss_pred             CCc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCC------CCCCCCCCCCCccCCCHHHHHHHHH
Confidence            988 999999999999999999999999999999999999999999995      2568999999999999999999999


Q ss_pred             HHHHHHHhhCc-eEeeCCCCCc-ccccccCCCCCccEEEeecc
Q 013728          394 VFIHNMIKRFK-WDLLIPDEKF-GYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       394 ~~l~~ll~~f~-~~~~~~~~~~-~~~~~~~~~~~~~v~~~~r~  434 (437)
                      ++++.|+++|+ +++.+ +..+ ..+.+..+..+++|+++||.
T Consensus       370 ~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~lpv~~~~r~  411 (415)
T 2zwu_A          370 VTLKEWLTRIPDFSIAP-GAQIQHKSGIVSGVQALPLVWDPAT  411 (415)
T ss_dssp             HHHHHHHHHCCSCEECT-TCCCCEECSSBCEESCCEEECCGGG
T ss_pred             HHHHHHHHhCCCCEECC-CcccccCCccccCcceeEEEEecCC
Confidence            99999999998 99975 3334 34567788889999999985


No 37 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=2.4e-57  Score=431.49  Aligned_cols=356  Identities=21%  Similarity=0.278  Sum_probs=280.8

Q ss_pred             CCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC-hhhhH
Q 013728           39 PPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW-PSSVG  117 (437)
Q Consensus        39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~-~~~~~  117 (437)
                      ++++..+|.-+..+++.......+|+.++.++ ++||| |++++++   ++++++++.++++++++. .+++.. .....
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gp-v~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~   80 (418)
T 3r9b_A            7 STAATAQEAQGLLLQLLDPATRADPYPIYDRI-RRGGP-LALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQ   80 (418)
T ss_dssp             --------CHHHHHHHHSGGGTTCCHHHHHHH-HHHCC-EEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHH
T ss_pred             cchhhhccCCcccCCCCChhhccCchHHHHHH-HhcCC-EEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccc
Confidence            33333444444455555444457899999998 68899 9998765   999999999999998754 333222 11111


Q ss_pred             h----------hhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc------------------
Q 013728          118 K----------LFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE------------------  169 (437)
Q Consensus       118 ~----------~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------  169 (437)
                      .          ..+.+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++ ...                  
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~~~~~~d~~~~~~~~~~~~v  158 (418)
T 3r9b_A           81 RQLAAETQPRPQGPASFLFLDPPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AVDGPEFNLIDNLAYPLPVAV  158 (418)
T ss_dssp             HHHC---------CCCGGGCCTTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TCCSSEEEHHHHTTTHHHHHH
T ss_pred             cccccccccccccccchhhcCCchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hhccCCeehHHHHhCcCCHHH
Confidence            1          233478889999999999999 8999999999999999999999987 422                  


Q ss_pred             --cccccCc------------------------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 013728          170 --GVMSFPV------------------------NFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIA  223 (437)
Q Consensus       170 --~~~~~~~------------------------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~  223 (437)
                        .+++.+.                        +++....++..++.+.+.+++.+.+++ +++.  ...|+++.+++..
T Consensus       159 i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~-r~~~--~~~d~l~~ll~~~  235 (418)
T 3r9b_A          159 ICRLLGVPIEDEPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDE-RRRT--PGEDLMSGLVAVE  235 (418)
T ss_dssp             HHHHHTCCGGGHHHHHHHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHH-TTTS--CCSSHHHHHHHHH
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHH-HHhC--CCccHHHHHHHhh
Confidence              0001110                        113334456667777788888888877 5441  2678999999874


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHH
Q 013728          224 DSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVA  303 (437)
Q Consensus       224 ~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i  303 (437)
                      + ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                     |+++||
T Consensus       236 ~-~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i  293 (418)
T 3r9b_A          236 E-SGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS---------------------RASAVI  293 (418)
T ss_dssp             H-HSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG---------------------GHHHHH
T ss_pred             h-ccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------------hHHHHH
Confidence            3 344599999999999999999999999999999999999999999999853                     679999


Q ss_pred             HHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCc
Q 013728          304 SEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCP  383 (437)
Q Consensus       304 ~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~  383 (437)
                      +|+||++|+++.+.|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|+|      ....++|||+|+|.|+
T Consensus       294 ~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R------~~~~~~~FG~G~r~C~  367 (418)
T 3r9b_A          294 EETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR------AQIRHLGFGKGAHFCL  367 (418)
T ss_dssp             HHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC------SCCCCCTTCCGGGCCT
T ss_pred             HHHHHhCCccccceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCC------CCCCCcCCCCcCccCc
Confidence            9999999999988899999999999999999999999999999999999999999999      4567899999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCcccccccCCCCCccEEEeecc
Q 013728          384 GYEFERLLILVFIHNMIKRF-KWDLLIPDEKFGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       384 G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      |+++|.+|++++++.|+++| ++++.++ .....+.+..+..+++|+++||.
T Consensus       368 G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          368 GAPLARLEATVALPALAARFPEARLSGE-PEYKRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEECSC-CEECSCSSBCCEEECEEEC----
T ss_pred             cHHHHHHHHHHHHHHHHHhCccceeCCC-CccccCCcccCcceeEEEecCCC
Confidence            99999999999999999999 8998743 45555667889999999999884


No 38 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1.9e-57  Score=429.26  Aligned_cols=337  Identities=19%  Similarity=0.264  Sum_probs=277.5

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceecc----C-hh--hhHh-hhccccccccChH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTW----W-PS--SVGK-LFKTCLLMKAGDD  131 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~----~-~~--~~~~-~~g~~l~~~~g~~  131 (437)
                      .+++.++.+| ++||+ |+++++ ++.++++++|++.+++++.++.  +...    + ..  .+.. ..+.+++..+|+.
T Consensus        19 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   94 (403)
T 3aba_A           19 FLPPDGIADI-RAAAP-VTRATFTSGHEAWLVTGYEEVRALLRDSS--FSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE   94 (403)
T ss_dssp             TSCCTTHHHH-HHHCS-EEEEECTTSCEEEEECCHHHHHHHHHCTT--EESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred             cChhHHHHHH-HhcCC-eeeeccCCCceEEEEcCHHHHHHHHcCCC--cccccccccccccccccccccccccccCCchh
Confidence            5789999999 89999 999998 7899999999999999998753  4332    1 11  1112 1345788889999


Q ss_pred             HHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhh-c--------------------cccccCcc-------------
Q 013728          132 AKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYW-E--------------------GVMSFPVN-------------  177 (437)
Q Consensus       132 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~-------------  177 (437)
                      |+++|+.+ .+.|++..++.+.+.+.+.++++++... .                    .+++.+..             
T Consensus        95 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~  173 (403)
T 3aba_A           95 HTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISDLFGVPVERRAEFQDIAEAMM  173 (403)
T ss_dssp             HHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHS
T ss_pred             HHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence            99999999 8889999999999999999988887543 1                    00111100             


Q ss_pred             -CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHH
Q 013728          178 -FPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITL  256 (437)
Q Consensus       178 -~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~  256 (437)
                       .... -++..++.+.+.+++.+.+++ +++.  ...|+++.|++..+ ++..++++++.+++.++++||+|||+++++|
T Consensus       174 ~~~~~-p~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~  248 (403)
T 3aba_A          174 RVDQD-AAATEAAGMRLGGLLYQLVQE-RRAN--PGDDLISALITTED-PDGVVDDMFLMNAAGTLLIAAHDTTACMIGL  248 (403)
T ss_dssp             BSSSC-HHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHTSCC-TTCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCc-HHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhhcc-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             0000 033445666777888888877 6552  25689999987643 3446999999999999999999999999999


Q ss_pred             HHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCC
Q 013728          257 LLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGW  335 (437)
Q Consensus       257 ~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~  335 (437)
                      ++++|++||++|+|+++|+                     .||+|||+|+||++|+++ .++|.+.+|++++||.||||+
T Consensus       249 ~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt  307 (403)
T 3aba_A          249 GTALLLDSPDQLALLREDP---------------------SLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE  307 (403)
T ss_dssp             HHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTC
T ss_pred             HHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCC
Confidence            9999999999999999884                     368999999999999999 889999999999999999999


Q ss_pred             EEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCc
Q 013728          336 KLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKF  414 (437)
Q Consensus       336 ~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~  414 (437)
                      .|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|+++|++|++++++.|+++| ++++.++...+
T Consensus       308 ~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~  381 (403)
T 3aba_A          308 QVVAHVLAADFDPAFVEEPERFDITRRP------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEEL  381 (403)
T ss_dssp             EEEECHHHHTTCTTTSSSTTSCCTTSCC------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGS
T ss_pred             EEEechhhhCCChhhCCCccccCCCCCC------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCcccc
Confidence            9999999999999999999999999973      4689999999999999999999999999999999 69987553333


Q ss_pred             --ccccccCCCCCccEEEeecc
Q 013728          415 --GYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       415 --~~~~~~~~~~~~~v~~~~r~  434 (437)
                        ..+...++..+++|++++|+
T Consensus       382 ~~~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          382 RFRHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             CBCTTBSSCCBSCCEEECCCCC
T ss_pred             ccccCcccCCcceeEEEecCCC
Confidence              33456789999999999985


No 39 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=8.5e-57  Score=426.20  Aligned_cols=349  Identities=18%  Similarity=0.212  Sum_probs=281.8

Q ss_pred             CCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh
Q 013728           34 PNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP  113 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~  113 (437)
                      ++.+.||||+.          .     .+++.++.++++ ||| |   ++++.++++++|++.+++++.+++ .|..+..
T Consensus        16 ~pl~~~PGp~~----------~-----~~p~~~~~~l~~-~gp-v---~~~~~~~~vv~~~~~v~~vl~~~~-~f~~~~~   74 (411)
T 2jjn_A           16 TTIDEVPGMAD----------E-----TALLDWLGTMRE-KQP-V---WQDRYGVWHVFRHADVQTVLRDTA-TFSSDPT   74 (411)
T ss_dssp             -CCCSCCCSSC----------H-----HHHHHHHHHHHH-HCS-E---EECTTSCEEECSHHHHHHHHHCTT-TEESCGG
T ss_pred             CCCCCCCCccc----------c-----cChHHHHHHHHH-hCC-c---ccCCCCeEEECCHHHHHHHHcCcc-cccCccc
Confidence            56777888861          1     258889999976 999 8   456678999999999999998764 4554432


Q ss_pred             hhhHh--hhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------------------ccc
Q 013728          114 SSVGK--LFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------------------GVM  172 (437)
Q Consensus       114 ~~~~~--~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------~~~  172 (437)
                      ..+..  ..+.+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++. -.                   .++
T Consensus        75 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~-~~~~~d~~~~~~~~~~~~vi~~~f  152 (411)
T 2jjn_A           75 RVIEGASPTPGMIHEIDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD-AGESFDLVDVLAFPLPVTIVAELL  152 (411)
T ss_dssp             GGSTTCCCCTTCGGGCCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT-SCSEEEHHHHTTTHHHHHHHHHHH
T ss_pred             ccCCcccccccccccCCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHc
Confidence            22222  223477888999999999999 88899999999999999999988864 11                   001


Q ss_pred             ccC--------------------ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCH
Q 013728          173 SFP--------------------VNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTE  232 (437)
Q Consensus       173 ~~~--------------------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~  232 (437)
                      +.+                    .+.+....++..++...+.+++.+.+++ +++.  ...|+++.|++... ++..+++
T Consensus       153 G~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~-~~~~l~~  228 (411)
T 2jjn_A          153 GLPPMDHEQFGDWSGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCAE-RRAD--PGDDLISRLVLAEV-DGRALDD  228 (411)
T ss_dssp             TCCSCCCSTTCCHHHHHHHSCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCCB-TTBCCCH
T ss_pred             CCCHHHHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhccc-CCCCCCH
Confidence            111                    1111112334556677788888888887 6651  26789999997643 3445999


Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCC
Q 013728          233 MEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPP  312 (437)
Q Consensus       233 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  312 (437)
                      +++.+++.++++||+|||+++++|++++|++||++|+|+++|++                     ||+|||+|+||++|+
T Consensus       229 ~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~  287 (411)
T 2jjn_A          229 EEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG---------------------RIPAIVEEVLRYRPP  287 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG---------------------GHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------hHHHHHHHHhhhCCC
Confidence            99999999999999999999999999999999999999999963                     789999999999999


Q ss_pred             CcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHH
Q 013728          313 AIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLI  392 (437)
Q Consensus       313 ~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~  392 (437)
                      ++.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||..    ...++|||+|+|.|+|+++|++|+
T Consensus       288 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----~~~~~pFG~G~r~C~G~~lA~~e~  363 (411)
T 2jjn_A          288 FPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG----GAAQLSFGHGVHFCLGAPLARLEN  363 (411)
T ss_dssp             SCEEEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS----SCCCGGGCSSTTCCTTHHHHHHHH
T ss_pred             cCCcceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC----CCCccCCCCCCccCcCHHHHHHHH
Confidence            9988999999999999999999999999999999999999999999999753    136899999999999999999999


Q ss_pred             HHHHHHHHhhCc-eEeeCCCCCc--ccccccCCCCCccEEEeeccC
Q 013728          393 LVFIHNMIKRFK-WDLLIPDEKF--GYDPMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       393 ~~~l~~ll~~f~-~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r~~  435 (437)
                      +++++.|+++|+ +++.+ +..+  ..+....+..+++|+++++.-
T Consensus       364 ~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~lpv~~~~~~r  408 (411)
T 2jjn_A          364 RVALEEIIARFGRLTVDR-DDERLRHFEQIVLGTRHLPVLAGSSPR  408 (411)
T ss_dssp             HHHHHHHHHHHSCCEECC-SSCCCCBCCSSSSSBSCCEEECSCCTT
T ss_pred             HHHHHHHHHhCCcceECC-CCceeccccccccCcceeEEEecCCCC
Confidence            999999999995 99973 3333  335567788899999998753


No 40 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.6e-58  Score=441.13  Aligned_cols=341  Identities=16%  Similarity=0.223  Sum_probs=266.0

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChh-hhHhhhcc-ccccccChHHHHHHHh
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPS-SVGKLFKT-CLLMKAGDDAKRMRRM  138 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~-~~~~~~g~-~l~~~~g~~~~~~R~~  138 (437)
                      .+|+.++.++ ++||| |+++..++  ++++++++.+++++++++. |.+.... .....+|. +++..+|+.|+++|++
T Consensus        53 ~~p~~~~~~l-r~~gp-v~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~  127 (441)
T 3nc3_A           53 NNPYAYFSQL-REEDP-VHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRI  127 (441)
T ss_dssp             HCGGGTHHHH-HHHCS-EEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSCC-------------CCHHH
T ss_pred             cChHHHHHHH-HhcCC-EEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccccCCCccccCCcHHHHHHHHH
Confidence            5899999887 68999 99987655  8999999999999988764 5544322 22234454 5788899999999999


Q ss_pred             hhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCc--------------------cC
Q 013728          139 MMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPV--------------------NF  178 (437)
Q Consensus       139 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~--------------------~~  178 (437)
                      + .+.|++..++.+.+.+.+.++++++....                    .++..+.                    ..
T Consensus       128 ~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~  206 (441)
T 3nc3_A          128 V-VRSFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISEWHSGVADFITSISQ  206 (441)
T ss_dssp             H-HHHHHHTHHHHHHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHCSCC
T ss_pred             H-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccC
Confidence            9 89999999999999999999999974322                    0111111                    01


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 013728          179 PGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLL  258 (437)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l  258 (437)
                      +.....+..++...+.+++.+.+++ +++  +...|+++.|++... ++..++++++.+++..+++||+|||+++++|++
T Consensus       207 ~~~~~~~~~~~~~~l~~~~~~~i~~-rr~--~~~~Dll~~Ll~~~~-~~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l  282 (441)
T 3nc3_A          207 SPEARAHSLWCSEQLSQYLMPVIKE-RRV--NPGSDLISILCTSEY-EGMALSDKDILALILNVLLAATEPADKTLALMI  282 (441)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHH-HTT--SCCSSHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHH-HHh--CCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            1111223445566677777777776 543  126789999987654 445699999999999999999999999999999


Q ss_pred             HHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEe
Q 013728          259 KYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLH  338 (437)
Q Consensus       259 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~  338 (437)
                      ++|++||++|+++++|+                     +|++++|+|+||++|+++.++|.+.+|++++||.||||+.|.
T Consensus       283 ~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~Gt~V~  341 (441)
T 3nc3_A          283 YHLLNNPEQMNDVLADR---------------------SLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVF  341 (441)
T ss_dssp             HHHHTSHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEESSSCEECTTCEEE
T ss_pred             HHHHhCHHHHHHHHhCH---------------------HHHHHHHHHhhhcCCcccCccEEECCCEEECCEEECCCCEEE
Confidence            99999999999999874                     689999999999999999889999999999999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCC
Q 013728          339 WSTGSTHKDETLFPNPETFDASRFEREG----ATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEK  413 (437)
Q Consensus       339 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~----~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~  413 (437)
                      ++.+++||||++|+||++|+|+||+..+    .....++|||+|+|.|+|+++|++|++++++.|+++| ++++.+++..
T Consensus       342 ~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~  421 (441)
T 3nc3_A          342 CMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDFCY  421 (441)
T ss_dssp             EEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTCCC
T ss_pred             echHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCCcc
Confidence            9999999999999999999999997653    2267899999999999999999999999999999999 9999755555


Q ss_pred             cccccccCCCCCccEEEee
Q 013728          414 FGYDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       414 ~~~~~~~~~~~~~~v~~~~  432 (437)
                      ...+...++...++|+++|
T Consensus       422 ~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          422 AESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             CEECSSBCEESCCEEECC-
T ss_pred             cccCccccCcceeEEEEec
Confidence            5556677888899999875


No 41 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=8e-57  Score=426.28  Aligned_cols=352  Identities=16%  Similarity=0.218  Sum_probs=276.8

Q ss_pred             CCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhh-CCceEEEee-CCCcEEEEeCcchhhhcccccccceeccCh
Q 013728           36 PHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKY-DSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTWWP  113 (437)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~y-G~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~  113 (437)
                      ...||+|+++|.+.....+.     .+++.++.+| ++| |+ ||++++ ++.++++++|++.+++++.+++  +.....
T Consensus         4 ~~~~~~~~~~P~~~~~~~~~-----~~p~~~~~~l-~~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~   74 (412)
T 2zbx_A            4 TATTPQTTDAPAFPSNRSCP-----YQLPDGYAQL-RDTPGP-LHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRT   74 (412)
T ss_dssp             ----CCCCSSCBSSCCCSST-----TSCCHHHHHH-HHSSSS-EEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTT
T ss_pred             CCCCCCCCCCCCCCCCchhc-----cChHHHHHHH-HhcCCC-eEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcc
Confidence            35677777777652222233     5899999999 788 99 999998 7899999999999999998764  222111


Q ss_pred             ----hhhH----hh--hccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------
Q 013728          114 ----SSVG----KL--FKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------  169 (437)
Q Consensus       114 ----~~~~----~~--~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------  169 (437)
                          ....    .+  .+.+++..+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....              
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~  153 (412)
T 2zbx_A           75 DDNFPATSPRFEAVRESPQAFIGLDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALP  153 (412)
T ss_dssp             STTSCCCSGGGC----CCCCGGGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTH
T ss_pred             cccccccccccccccccccccccCCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence                0010    01  23467788999999999999 88899999999999999999988874321              


Q ss_pred             -------cccccCcc--------------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCC
Q 013728          170 -------GVMSFPVN--------------FPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGK  228 (437)
Q Consensus       170 -------~~~~~~~~--------------~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~  228 (437)
                             .+++.+..              ... . ++..++...+.+++.+.+++ +++.  ...|+++.+++..+ ++.
T Consensus       154 ~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~-~~~  227 (412)
T 2zbx_A          154 VPSMVICRLLGVPYADHEFFQDASKRLVQSTD-A-QSALTARNDLAGYLDGLITQ-FQTE--PGAGLVGALVADQL-ANG  227 (412)
T ss_dssp             HHHHHHHHHHTCCGGGHHHHHHHHHHHHHCSS-H-HHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHTTT-TTT
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHhccCc-H-HHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhcc-cCC
Confidence                   00111100              000 0 23344556677777777777 6542  25789999997654 344


Q ss_pred             CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhc
Q 013728          229 FLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMR  308 (437)
Q Consensus       229 ~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  308 (437)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                     .|++|||+|+||
T Consensus       228 ~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lR  286 (412)
T 2zbx_A          228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR---------------------SLVPGAVEELLR  286 (412)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999999874                     368999999999


Q ss_pred             CCCCCc-ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHH
Q 013728          309 LSPPAI-GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEF  387 (437)
Q Consensus       309 l~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~  387 (437)
                      ++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||      ...++|||.|+|.|+|+++
T Consensus       287 l~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~l  360 (412)
T 2zbx_A          287 YLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRS------ARHHLAFGFGVHQCLGQNL  360 (412)
T ss_dssp             HHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCCSTTSCTTHHH
T ss_pred             hCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCC------CCCccCCCCCCCcCccHHH
Confidence            999999 689999999999999999999999999999999999999999999996      3568999999999999999


Q ss_pred             HHHHHHHHHHHHHhhC-ceEeeCCCCCccc--ccccCCCCCccEEE
Q 013728          388 ERLLILVFIHNMIKRF-KWDLLIPDEKFGY--DPMLSPSQGLPIRL  430 (437)
Q Consensus       388 a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~v~~  430 (437)
                      |++|++++++.|+++| ++++.++...+++  +...+....++|++
T Consensus       361 A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~  406 (412)
T 2zbx_A          361 ARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTW  406 (412)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEEC
T ss_pred             HHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeec
Confidence            9999999999999999 7999755344433  44566677777765


No 42 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=3e-57  Score=430.62  Aligned_cols=339  Identities=17%  Similarity=0.232  Sum_probs=276.7

Q ss_pred             CCchHHHHHHHHhhC-CceEEEeeCCCcEEEEeCcchhhhcccccccceeccChh---hhHhhhccccccccChHHHHHH
Q 013728           61 GKPERFIRERMEKYD-SRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPS---SVGKLFKTCLLMKAGDDAKRMR  136 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG-~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~---~~~~~~g~~l~~~~g~~~~~~R  136 (437)
                      .+|+.++.++++++| | |+++..++ ++++++|++.+++++++.+ .|.+....   ......+.+++..+|+.|+++|
T Consensus        38 ~dp~~~~~~lr~~~G~p-v~~~~~~~-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~R  114 (421)
T 3lxh_A           38 QGFHEAWKRVQQPDTPP-LVWTPFTG-GHWIATRGTLIDEIYRSPE-RFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYR  114 (421)
T ss_dssp             GCHHHHHHHHCCTTCCS-EEEESSTT-SEEEECSHHHHHHHHTCTT-TEETTCCSSSHHHHHHCCCTTTTCCTTTHHHHH
T ss_pred             cChhHHHHHHHhcCCCC-eEeccCCC-CeEEEcCHHHHHHHHcChh-hccCCcccCCcccccccccCCccCCcHHHHHHH
Confidence            589999999987766 8 99998865 5899999999999997654 45543221   1112223367788999999999


Q ss_pred             HhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccC------------------ccC
Q 013728          137 RMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFP------------------VNF  178 (437)
Q Consensus       137 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~------------------~~~  178 (437)
                      +.+ .+.|++..++.+.+.+.+.++++++....                    .++..+                  .++
T Consensus       115 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~~  193 (421)
T 3lxh_A          115 KAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPSGNT  193 (421)
T ss_dssp             HHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCCCSS
T ss_pred             HHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccCC
Confidence            999 88999999999999999999999984322                    011111                  122


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 013728          179 PGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLL  258 (437)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l  258 (437)
                      |....++..++.+.+.+++.+++++ +++.  ...|+++.|++... ++..++++++.+++..+++||+|||+++++|++
T Consensus       194 p~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l  269 (421)
T 3lxh_A          194 PEEQGRSLEAANKGFFEYVAPIIAA-RRGG--SGTDLITRILNVEI-DGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMM  269 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-HTTC--CCCSHHHHHHTSCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            3323456667778888888888887 6542  26789999997644 344599999999999999999999999999999


Q ss_pred             HHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEe
Q 013728          259 KYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLH  338 (437)
Q Consensus       259 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~  338 (437)
                      ++|++||++|+|+++|++                     |+++||+|+||++|++ .++|.+.+|++++||.||||+.|+
T Consensus       270 ~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~l~G~~Ip~G~~V~  327 (421)
T 3lxh_A          270 IYLSRHPETVAEMRREPL---------------------KLQRGVEELFRRFAVV-SDARYVVSDMEFHGTMLKEGDLIL  327 (421)
T ss_dssp             HHHTTCHHHHHHHHHCHH---------------------HHHHHHHHHHHHCCCB-EEEEEECSCEEETTEEECTTCEEE
T ss_pred             HHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhcCcc-CCceeeCCCeeECCEEECCCCEEE
Confidence            999999999999999975                     6799999999999999 899999999999999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCcccc
Q 013728          339 WSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKFGYD  417 (437)
Q Consensus       339 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~  417 (437)
                      ++.+++||||++|+||++|+|||      ....++|||+|+|.|+|+++|++|++++++.|+++| ++++.+++......
T Consensus       328 ~~~~~~~rdp~~~~dP~~F~PeR------~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~~~  401 (421)
T 3lxh_A          328 LPTALHGLDDRHHDDPMTVDLSR------RDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYHS  401 (421)
T ss_dssp             EETHHHHTCTTTSSSTTSCCTTC------SCCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCEEEC
T ss_pred             EchhhhCCChhhCCCcCeeCCCC------CCCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCCceecc
Confidence            99999999999999999999999      356799999999999999999999999999999999 99997433221123


Q ss_pred             cccCCCCCccEEEeeccC
Q 013728          418 PMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       418 ~~~~~~~~~~v~~~~r~~  435 (437)
                      ........++|+++||..
T Consensus       402 ~~~~~~~~lpv~~~p~~~  419 (421)
T 3lxh_A          402 GIVAAVENIPLEWEPQRV  419 (421)
T ss_dssp             SSBCEEECCEEECCCC--
T ss_pred             ccccCceeeeEEEecccc
Confidence            345566679999999863


No 43 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=8.1e-57  Score=424.54  Aligned_cols=332  Identities=17%  Similarity=0.267  Sum_probs=273.0

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh-h---------hhHhhhccccccccCh
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP-S---------SVGKLFKTCLLMKAGD  130 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~-~---------~~~~~~g~~l~~~~g~  130 (437)
                      .+++.++.++ ++||| |++ +  |.++++++|++.+++++.++  .+..... .         .+..+++.+++..+|+
T Consensus        13 ~~p~~~~~~l-~~yGp-v~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   85 (397)
T 3buj_A           13 RDPYPSYHWL-LRHDP-VHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEP   85 (397)
T ss_dssp             HCCHHHHHHH-HHHCS-EEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTT
T ss_pred             cCchHHHHHH-HhcCC-eee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccccccCCch
Confidence            3789999877 59999 999 6  58899999999999999873  3443211 1         1112225578888999


Q ss_pred             HHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccC---------------
Q 013728          131 DAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFP---------------  175 (437)
Q Consensus       131 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~---------------  175 (437)
                      .|+++|+.+ .+.|++..++.+.+.+.+.++++++....                    .+++.+               
T Consensus        86 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~  164 (397)
T 3buj_A           86 DHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGLLGLPAADWGAVGRWSRDVG  164 (397)
T ss_dssp             HHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHTTTEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHH
T ss_pred             hHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence            999999999 88999999999999999988888874321                    001111               


Q ss_pred             ----ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHH
Q 013728          176 ----VNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSS  251 (437)
Q Consensus       176 ----~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~  251 (437)
                          ..++....++..++.+.+.+++.+.+++ +++.  ...|+++.|++.. ++|. ++++++.+++..+++||+|||+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~-~~~~-ls~~ei~~~~~~~~~AG~~Tt~  239 (397)
T 3buj_A          165 RTLDRGASAEDMRRGHAAIAEFADYVERALAR-RRRE--GGEDLLALMLDAH-DRGL-MSRNEIVSTVVTFIFTGHETVA  239 (397)
T ss_dssp             GGGCSSCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--CCCSHHHHHHHHH-HTTS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHHHHHH-HHcC--CCCCHHHHHHHhh-hcCC-CCHHHHHHHHHHHHHcCchHHH
Confidence                1111222345556677788888888887 6552  2568999999875 3344 9999999999999999999999


Q ss_pred             HHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeee
Q 013728          252 SAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTI  331 (437)
Q Consensus       252 ~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~i  331 (437)
                      ++++|++++|++||++|+|+++|+                     .||+|||+|+||++|+++.++|.+.+|++++||.|
T Consensus       240 ~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~I  298 (397)
T 3buj_A          240 SQVGNAVLSLLAHPDQLDLLRRRP---------------------DLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRL  298 (397)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSCCEEEEEESSCEEETTEEE
T ss_pred             HHHHHHHHHHHhCHHHHHHHhhCH---------------------HHHHHHHHHHHhhcCcccCcceEECCCEEECCEEE
Confidence            999999999999999999999984                     28899999999999999988999999999999999


Q ss_pred             CCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCC
Q 013728          332 PKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIP  410 (437)
Q Consensus       332 p~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  410 (437)
                      |||+.|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|+++|++|++++++.| ++| ++++.++
T Consensus       299 p~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~  371 (397)
T 3buj_A          299 RRDDVVVVLAGAANRDPRRYDRPDDFDIERDP------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCA  371 (397)
T ss_dssp             CTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSC
T ss_pred             CCCCEEEEChhhhCCCccccCCccccCCCCCC------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCC
Confidence            99999999999999999999999999999985      458999999999999999999999999999 999 8999765


Q ss_pred             CCC--cccccccCCCCCccEEEeec
Q 013728          411 DEK--FGYDPMLSPSQGLPIRLQPH  433 (437)
Q Consensus       411 ~~~--~~~~~~~~~~~~~~v~~~~r  433 (437)
                      ...  ...+.+..+..+++|+++||
T Consensus       372 ~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          372 SDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             STTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             CcccccccccccCCCcceeEEecCC
Confidence            333  33345678899999999987


No 44 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=3.3e-57  Score=431.51  Aligned_cols=356  Identities=16%  Similarity=0.205  Sum_probs=280.2

Q ss_pred             CCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEe--------eCCCcEEEEeCcchhhhcccccccc
Q 013728           36 PHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTC--------LLGEDMIVFCGTAGHKLLFSNENKL  107 (437)
Q Consensus        36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~--------~~~~~~v~v~~~~~i~~i~~~~~~~  107 (437)
                      ...||+|.++++++..+...     .+|+.++.++ ++||| |+++.        +|+.+++++++++.++++++++. .
T Consensus        17 ~~~p~~~~~~~~~~~~~~~~-----~~p~~~~~~l-r~~gP-v~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~-~   88 (433)
T 3ivy_A           17 VPSPNLPPGFDFTDPAIYAE-----RLPVAEFAEL-RSAAP-IWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSD-V   88 (433)
T ss_dssp             ---CCCCTTCCTTCHHHHTT-----CCCHHHHHHH-HHHCS-EEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTT-T
T ss_pred             cCCCCCCCCCCCCCHHHhhc-----CCccHHHHHH-HhcCC-EEecccccccccccCCCCEEEEecHHHHHHHHcChh-h
Confidence            35677887787776544222     5799999999 88999 99998        45579999999999999998764 4


Q ss_pred             eeccChhh-----------hHhhhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-------
Q 013728          108 VRTWWPSS-----------VGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-------  169 (437)
Q Consensus       108 ~~~~~~~~-----------~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------  169 (437)
                      |.+.....           .....+.+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....       
T Consensus        89 fs~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~  167 (433)
T 3ivy_A           89 FSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFV  167 (433)
T ss_dssp             EESTTTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHHHCEEEHH
T ss_pred             ccCCcccccccccccccccccccccCCccccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeeHH
Confidence            54332111           112334578889999999999999 99999999999999999999998874321       


Q ss_pred             -------------cccccC----------------ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHH
Q 013728          170 -------------GVMSFP----------------VNFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLV  220 (437)
Q Consensus       170 -------------~~~~~~----------------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll  220 (437)
                                   .++..+                ...|.....+..++...+.+++.+++++ +++.  ...|+++.|+
T Consensus       168 ~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll  244 (433)
T 3ivy_A          168 EQVSCELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYAHIDPKASSAELIGYAMKMAEE-KAKN--PADDIVTQLI  244 (433)
T ss_dssp             HHTTSHHHHHHHHHHHTCCHHHHHHHHHHHTTCSCCCCGGGTTCCHHHHHHHHHHHHHHHHHH-C---------CHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHHHHH-HhcC--CCCcHHHHHH
Confidence                         001110                0111111114456777788888888877 5431  2668999998


Q ss_pred             HHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHH
Q 013728          221 VIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTW  300 (437)
Q Consensus       221 ~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~  300 (437)
                      +..+ ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                       +
T Consensus       245 ~~~~-~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~  300 (433)
T 3ivy_A          245 QADI-DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP-----------------------E  300 (433)
T ss_dssp             SCC---CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-----------------------T
T ss_pred             hhhc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-----------------------c
Confidence            7643 444699999999999999999999999999999999999999999999964                       5


Q ss_pred             HHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccC-CCC
Q 013728          301 NVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFG-GGP  379 (437)
Q Consensus       301 a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG-~G~  379 (437)
                      +||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|+||.      ..++||| +|+
T Consensus       301 a~i~E~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~------~~~l~FGg~G~  374 (433)
T 3ivy_A          301 TAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNP------NPHVGFGGTGA  374 (433)
T ss_dssp             THHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS------CCCCTTCSSST
T ss_pred             chhHHHhhhCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCC------CCCCCCCCCCC
Confidence            899999999999998899999999999999999999999999999999999999999999984      4689999 999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhhCc-eEeeCCCCCcccccccCCCCCccEEEeecc
Q 013728          380 RMCPGYEFERLLILVFIHNMIKRFK-WDLLIPDEKFGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       380 ~~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      |.|+|+++|.+|++++++.|+++|+ +++.++. ....+........++|++++|.
T Consensus       375 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~g~~~lpv~~~~R~  429 (433)
T 3ivy_A          375 HYCIGANLARMTINLIFNAVADHMPDLKPISAP-ERLRSGWLNGIKHWQVDYTGRC  429 (433)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC-EECCCSSBCCEEECEEESCC--
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC-ceeccCcccCcceeEEEEeccc
Confidence            9999999999999999999999998 9997443 3333445566678999999885


No 45 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=3.7e-57  Score=440.19  Aligned_cols=369  Identities=18%  Similarity=0.251  Sum_probs=273.6

Q ss_pred             CCCCCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcE-------EEEeCcchhhhcccccc-
Q 013728           34 PNPHLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDM-------IVFCGTAGHKLLFSNEN-  105 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~-------v~v~~~~~i~~i~~~~~-  105 (437)
                      .+.+.||||++||++||++++.+..+..+++.++.++++|||++||++++++.++       +++.+++..+.++.... 
T Consensus        25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v  104 (495)
T 3dsk_A           25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV  104 (495)
T ss_dssp             CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred             CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence            4667899999999999999998655557999999999999998899999988888       67777777777775432 


Q ss_pred             ---cceeccChhhhHhhhcc----ccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------
Q 013728          106 ---KLVRTWWPSSVGKLFKT----CLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------  169 (437)
Q Consensus       106 ---~~~~~~~~~~~~~~~g~----~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------  169 (437)
                         ..+.+.++... .++|.    +++..+|+.|+++|+++ .+.|++.. +.+.+.+.+.++++++....         
T Consensus       105 ~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~vd  181 (495)
T 3dsk_A          105 EKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKAD  181 (495)
T ss_dssp             ECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred             cccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence               12223344344 56662    44557999999999999 77777644 77888888888888763211         


Q ss_pred             ---------------cccccCccCC--ChhhHHHHHHHHH----------HHHHHHHHHHHHHHHh--------cCC---
Q 013728          170 ---------------GVMSFPVNFP--GTTFYKSIRAADA----------IREELIKLIAKQTREA--------LGS---  211 (437)
Q Consensus       170 ---------------~~~~~~~~~p--~~~~~~~~~~~~~----------~~~~~~~~i~~~~~~~--------~~~---  211 (437)
                                     .+++.+....  ...+.........          +-..+.+++.+ ++..        ...   
T Consensus       182 l~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~  260 (495)
T 3dsk_A          182 FGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIH-TFSLPPALVKSDYQRLYE  260 (495)
T ss_dssp             SHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHS-SSCCCGGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHH-hhcccchhhhhhHHHHHH
Confidence                           1111111000  0000011110000          01223333222 1100        000   


Q ss_pred             -chhHHHHHHHHHhhcCCCCCHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHcc-CcHHHHHHHHHHHHhhhhcccCCCC
Q 013728          212 -KQDLLSRLVVIADSNGKFLTEMEVADNILLLL-FSSHDTSSSAITLLLKYLGQ-MPQVFENVLREQIGIAESKEQGELL  288 (437)
Q Consensus       212 -~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~l~~-~p~~~~kl~~Ei~~~~~~~~~~~~~  288 (437)
                       ..+.++.+++..++.+  ++++++..+++.++ +||++||+++++|++++|+. ||++|+++++|++++++.  .+..+
T Consensus       261 ~~~~~~~~ll~~~~~~~--l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~--~~~~~  336 (495)
T 3dsk_A          261 FFLESAGEILVEADKLG--ISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKS--NGGEL  336 (495)
T ss_dssp             HHHHHCHHHHHHHHHTT--CCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH--TTTCC
T ss_pred             HHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcc--CCCCC
Confidence             1233345555554433  99999998776665 99999999999999999996 999999999999999873  24679


Q ss_pred             CHHHhhcChHHHHHHHHhhcCCCCCccccccccccccc----CCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCC
Q 013728          289 KWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTY----SGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFER  364 (437)
Q Consensus       289 ~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  364 (437)
                      +++++++||||+|||+|+||++|+++...|.+.+|+++    +||.||||+.|+++.+.+||||++|+||++|+|+||++
T Consensus       337 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~  416 (495)
T 3dsk_A          337 TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG  416 (495)
T ss_dssp             CHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCH
T ss_pred             CHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCC
Confidence            99999999999999999999999999777889999999    49999999999999999999999999999999999997


Q ss_pred             CC-CCCCcccc---------cCCCCCCCccHHHHHHHHHHHHHHHHhhCceEeeCC
Q 013728          365 EG-ATPYSYVP---------FGGGPRMCPGYEFERLLILVFIHNMIKRFKWDLLIP  410 (437)
Q Consensus       365 ~~-~~~~~~~~---------FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  410 (437)
                      .+ .....+++         ||+|+|.|||+++|.+|++++++.|+++|++...++
T Consensus       417 ~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  472 (495)
T 3dsk_A          417 EEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV  472 (495)
T ss_dssp             HHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence            52 12333444         555559999999999999999999999999887654


No 46 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=1.1e-56  Score=426.60  Aligned_cols=339  Identities=18%  Similarity=0.253  Sum_probs=268.9

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeC--CCcEEEEeCcchhhhcccccccceeccC----------hhh-------hHhhhc
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLL--GEDMIVFCGTAGHKLLFSNENKLVRTWW----------PSS-------VGKLFK  121 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~--~~~~v~v~~~~~i~~i~~~~~~~~~~~~----------~~~-------~~~~~g  121 (437)
                      .+++.++.+++ +||| |+++++|  +.++++++|++.+++++.++  .|..+.          ...       +..+.|
T Consensus        20 ~~p~~~~~~l~-~~Gp-v~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (425)
T 2z3t_A           20 ADPYPVYRRYR-EAAP-VHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE   95 (425)
T ss_dssp             HCCHHHHHHHH-HHCS-EEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred             cChHHHHHHHH-hcCC-eEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence            37999999986 5999 9999987  78899999999999999875  344331          111       112233


Q ss_pred             cccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCc-----
Q 013728          122 TCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPV-----  176 (437)
Q Consensus       122 ~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~-----  176 (437)
                      .+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                    .+++.+.     
T Consensus        96 ~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~~G~~~~~~~~  174 (425)
T 2z3t_A           96 NWLVFLDPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISALLGIPEEDHTW  174 (425)
T ss_dssp             TCGGGCCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHHHTCCGGGHHH
T ss_pred             cccccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            578888999999999999 88999999999999999999998874321                    0000000     


Q ss_pred             ---------------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 013728          177 ---------------NFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILL  241 (437)
Q Consensus       177 ---------------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~  241 (437)
                                     .++....++..++.+.+.+++.+.+++ +++.  ...|+++.|++..++ +..++++++.+++..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~~-~~~ls~~el~~~~~~  250 (425)
T 2z3t_A          175 LRANAVALQEASTTRARDGRGYARAEAASQEFTRYFRREVDR-RGGD--DRDDLLTLLVRARDT-GSPLSVDGIVGTCVH  250 (425)
T ss_dssp             HHHHHHHHHTTCTTCCC---HHHHHHHHHHHHHHHHHHHHCC----------CHHHHHHHHHHT-TCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhhcc-CCCCCHHHHHHHHHH
Confidence                           011112334455566666777777665 4431  256899999987543 556999999999999


Q ss_pred             HHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccc
Q 013728          242 LLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREAL  321 (437)
Q Consensus       242 ~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~  321 (437)
                      +++||+|||+++++|++++|++||++|+|+++|+                     .|++|||+|+||++|+++.++|.+.
T Consensus       251 l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~R~~~  309 (425)
T 2z3t_A          251 LLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP---------------------ESTPAAVEELMRYDPPVQAVTRWAY  309 (425)
T ss_dssp             HHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBCEEEEEES
T ss_pred             HHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------------------HhHHHHHHHHHHhCCcccCcceEeC
Confidence            9999999999999999999999999999999985                     2789999999999999998899999


Q ss_pred             cccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHh
Q 013728          322 VDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIK  401 (437)
Q Consensus       322 ~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~  401 (437)
                      +|++++||.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|+++|++|++++++.|++
T Consensus       310 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~  383 (425)
T 2z3t_A          310 EDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA------ERQVGFGLGIHYCLGATLARAEAEIGLRALLD  383 (425)
T ss_dssp             SCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHH
T ss_pred             CCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999996      45899999999999999999999999999999


Q ss_pred             hC-ceEeeCCCC-CcccccccCCCCCccEEEeeccCC
Q 013728          402 RF-KWDLLIPDE-KFGYDPMLSPSQGLPIRLQPHQCS  436 (437)
Q Consensus       402 ~f-~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~r~~~  436 (437)
                      +| +++ .++.. .+..+.+..+..+++|++++.+++
T Consensus       384 ~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~~~~  419 (425)
T 2z3t_A          384 GIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDAALE  419 (425)
T ss_dssp             HCGGGG-SSCEEEEECSCSSBCCEEEEEECCC-----
T ss_pred             hCCcCc-cCCCccccccccccCCcceeeEEecchhhh
Confidence            99 899 64322 334455678889999999887754


No 47 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=2.3e-57  Score=428.41  Aligned_cols=337  Identities=17%  Similarity=0.199  Sum_probs=273.5

Q ss_pred             CCchHHHHHHHHhh--CCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChhh--hHhhhcc-ccccccChHHHHH
Q 013728           61 GKPERFIRERMEKY--DSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSS--VGKLFKT-CLLMKAGDDAKRM  135 (437)
Q Consensus        61 ~~~~~~~~~~~~~y--G~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~--~~~~~g~-~l~~~~g~~~~~~  135 (437)
                      .+++.++.+|+++|  || ||++++++ ++++++|++.+++++++.+ .|.+.....  .....+. +++..+|+.|+++
T Consensus        19 ~~p~~~~~~l~~~Y~~Gp-v~~~~~~~-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   95 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTP-IGWSEAYG-GHWVVAGYKEIQAVIQNTK-AFSNKGVTFPRYETGEFELMMAGQDDPVHKKY   95 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCS-EEEECGGG-CEEEECSHHHHHHHHTCCS-SEEGGGCSSSCC----CCCTTTTCCTTHHHHH
T ss_pred             cChhHHHHHHHhcCCCCC-eEEecCCC-CEEEEccHHHHHHHHhChh-hccCCcccccCCCCcccccCcccCCchHHHHH
Confidence            68999999999999  99 99999875 5999999999999996554 454332211  1111222 5677899999999


Q ss_pred             HHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-----cccccC-----------ccCCCh----------------hh
Q 013728          136 RRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-----GVMSFP-----------VNFPGT----------------TF  183 (437)
Q Consensus       136 R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----------~~~p~~----------------~~  183 (437)
                      |+.+ .+.|++..++.+.+.+.+.++++++....     ....+.           +..+..                ..
T Consensus        96 R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~  174 (398)
T 4fb2_A           96 RQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAILLGLPPEDGDTYRRWVWAITHVENP  174 (398)
T ss_dssp             HHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHHHTTSCGGGHHHHHHHHHHHHHCCCH
T ss_pred             HHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCH
Confidence            9999 89999999999999999999999984322     000000           001110                11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHcc
Q 013728          184 YKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQ  263 (437)
Q Consensus       184 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~  263 (437)
                      .+..++.+.+.+++.+.+++ +++.  ...|+++.|++... ++..++++++..++..+++||+|||+++++|++++|++
T Consensus       175 ~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~-~~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~  250 (398)
T 4fb2_A          175 EEGAEIFAELVAHARTLIAE-RRTN--PGNDIMSRVIMSKI-DGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAW  250 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHccc-CCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence            23445667777888888887 6652  26789999998654 34459999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeecccc
Q 013728          264 MPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGS  343 (437)
Q Consensus       264 ~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~  343 (437)
                      ||++|+|+++|++                     |++|||+|+||++|+++ ++|.+.+|++++||.||||+.|.++.++
T Consensus       251 ~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~  308 (398)
T 4fb2_A          251 DIELRRRLIAHPE---------------------LIPNAVDELLRFYGPAM-VGRLVTQEVTVGDITMKPGQTAMLWFPI  308 (398)
T ss_dssp             CHHHHHHHHHCGG---------------------GHHHHHHHHHHHHCCBC-EEEEECSCEEETTEEECTTCEEEECHHH
T ss_pred             CHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCCcC-CCeeeCCCEEECCEEECCCCEEEechHh
Confidence            9999999999964                     56899999999999999 9999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCccc-ccccC
Q 013728          344 THKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKFGY-DPMLS  421 (437)
Q Consensus       344 ~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~-~~~~~  421 (437)
                      +||||++|+||++|+||||      ...++|||+|+|.|+|+++|.+|++++++.|+++| ++++.++. ...+ .....
T Consensus       309 ~~rdp~~~~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~  381 (398)
T 4fb2_A          309 ASRDRSAFDSPDNIVIERT------PNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK-ECEWLMGQVA  381 (398)
T ss_dssp             HTTCTTTSSSTTSCCTTCC------SCCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTS-CCEEECSSBC
T ss_pred             hcCChhhCCCcCeeCCCCC------CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCC-Cceecccccc
Confidence            9999999999999999996      35689999999999999999999999999999999 99997543 2222 23455


Q ss_pred             CCCCccEEEeecc
Q 013728          422 PSQGLPIRLQPHQ  434 (437)
Q Consensus       422 ~~~~~~v~~~~r~  434 (437)
                      ....++|++++|.
T Consensus       382 ~~~~lpv~~~~~~  394 (398)
T 4fb2_A          382 GMLHVPIIFPKGK  394 (398)
T ss_dssp             EEEECEEECCCCC
T ss_pred             ccceeEEEEcCCC
Confidence            5667999999874


No 48 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=4.4e-56  Score=420.34  Aligned_cols=335  Identities=21%  Similarity=0.276  Sum_probs=275.4

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh---h----------hh-Hh---hhccc
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP---S----------SV-GK---LFKTC  123 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~---~----------~~-~~---~~g~~  123 (437)
                      .+++.++.+| ++||| ||++++++.++++++|++.+++++.++.  |..+..   .          .+ ..   ..+.+
T Consensus        14 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (404)
T 1z8o_A           14 VDWYRTYAEL-RETAP-VTPVRFLGQDAWLVTGYDEAKAALSDLR--LSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN   89 (404)
T ss_dssp             SSHHHHHHHH-HHHCS-EEEEEETTEEEEEECSHHHHHHHHHCTT--EECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred             cCcHHHHHHH-HhcCC-eeeecCCCceEEEEcCHHHHHHHHcCCC--ccccccccccccccccccccccccchhhhcccc
Confidence            5799999999 99999 9999998889999999999999998763  443211   1          12 22   14557


Q ss_pred             cccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCccC-----
Q 013728          124 LLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPVNF-----  178 (437)
Q Consensus       124 l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~-----  178 (437)
                      ++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                    .+++.+..-     
T Consensus        90 l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~  168 (404)
T 1z8o_A           90 MGTSDPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFG  168 (404)
T ss_dssp             GGGCCTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCGGGTTTHH
T ss_pred             cccCCCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHHHhCCCHHHHHHHH
Confidence            8888999999999999 88999999999999999999999874321                    111111100     


Q ss_pred             ---------CChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhh
Q 013728          179 ---------PGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDT  249 (437)
Q Consensus       179 ---------p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~t  249 (437)
                               ..+..++..++...+.+++.+.+++ +++.  ...|+++.|++..++++..++++++.+++..+++||+||
T Consensus       169 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~T  245 (404)
T 1z8o_A          169 RWSSEILVMDPERAEQRGQAAREVVNFILDLVER-RRTE--PGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEA  245 (404)
T ss_dssp             HHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhhhcccCCCCCHHHHHHHHHHHHhcchHH
Confidence                     0001234455667777888888887 6552  256899999976222344599999999999999999999


Q ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCe
Q 013728          250 SSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGY  329 (437)
Q Consensus       250 t~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~  329 (437)
                      |+++++|++++|++||++|+|+++|+                     .||+|||+|+||++|+++.++|.+.+|++++||
T Consensus       246 t~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~  304 (404)
T 1z8o_A          246 SVSLIGIGTYLLLTHPDQLALVRRDP---------------------SALPNAVEEILRYIAPPETTTRFAAEEVEIGGV  304 (404)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHTCSSCCEEEEESSCEEETTE
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HhHHHHHHHHHHhcCCccCcceEECCCEEECCE
Confidence            99999999999999999999999984                     368999999999999999889999999999999


Q ss_pred             eeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEee
Q 013728          330 TIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLL  408 (437)
Q Consensus       330 ~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~  408 (437)
                      .||||+.|.++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|+++|++|++++++.|+++| ++++.
T Consensus       305 ~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~  378 (404)
T 1z8o_A          305 AIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLG  378 (404)
T ss_dssp             EECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred             EECCCCEEEecchhhcCCcccCCChhhcCCCCCC------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEec
Confidence            9999999999999999999999999999999974      4689999999999999999999999999999999 59997


Q ss_pred             CCCCCc--ccccccCCCCCccEEE
Q 013728          409 IPDEKF--GYDPMLSPSQGLPIRL  430 (437)
Q Consensus       409 ~~~~~~--~~~~~~~~~~~~~v~~  430 (437)
                      ++..++  ..+.+.++..+++|++
T Consensus       379 ~~~~~~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          379 IDADDVVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             SCGGGCCCCCCSSSCCCSCCEEET
T ss_pred             CCCCcceeccccccCCcceeEEEe
Confidence            553333  3355678888999986


No 49 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=1.1e-56  Score=424.51  Aligned_cols=349  Identities=20%  Similarity=0.278  Sum_probs=275.7

Q ss_pred             CCCCCCcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEee-CCCc-EEEEeCcchhhhcccccccceeccCh-
Q 013728           37 HLPPGNLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCL-LGED-MIVFCGTAGHKLLFSNENKLVRTWWP-  113 (437)
Q Consensus        37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~-~~~~-~v~v~~~~~i~~i~~~~~~~~~~~~~-  113 (437)
                      ..+|+|+++|+.++   ..     .+|+.++.+++ +||| ||++++ ++.+ +++++|++.+++++.++  .|.+... 
T Consensus         8 ~~~~~~~~~p~~~~---~~-----~~p~~~~~~l~-~~Gp-v~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~   75 (406)
T 1s1f_A            8 QAVPPVRDWPAVDL---PG-----SDFDPVLTELM-REGP-VTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVM   75 (406)
T ss_dssp             CCSCCEEECCCCCC---CT-----TCCCHHHHHHH-HHCS-EEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTT
T ss_pred             hhccCCCCCCCCcc---cc-----cCchHHHHHHH-hcCC-eeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCC
Confidence            56788888899887   22     58999999985 7999 999996 5666 99999999999999874  3443321 


Q ss_pred             hh----hHh-h--hccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhh-c--------ccc-ccC-
Q 013728          114 SS----VGK-L--FKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYW-E--------GVM-SFP-  175 (437)
Q Consensus       114 ~~----~~~-~--~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~--------~~~-~~~-  175 (437)
                      ..    +.. .  ++.+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++... .        .+. .++ 
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~  154 (406)
T 1s1f_A           76 DRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPI  154 (406)
T ss_dssp             TTTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHH
T ss_pred             CCCcccccccccccccccccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHH
Confidence            11    112 2  24578888999999999999 8888999999999999999999887543 1        000 000 


Q ss_pred             ------ccCCChhhH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCH
Q 013728          176 ------VNFPGTTFY-----------------KSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTE  232 (437)
Q Consensus       176 ------~~~p~~~~~-----------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~  232 (437)
                            +..+.....                 +..++...+.+++.+.+++ +++.  ...|+++.|++..++  ..+++
T Consensus       155 ~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~~--~~ls~  229 (406)
T 1s1f_A          155 AVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGL-RSDS--AGEDVTSLLGAAVGR--DEITL  229 (406)
T ss_dssp             HHHHHHHTCCGGGHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHT-SCCS--CCCSHHHHHHHHHHT--TSSCH
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhhcc--cCCCH
Confidence                  011110000                 1122333444555555544 3221  256899999987543  45999


Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCC
Q 013728          233 MEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPP  312 (437)
Q Consensus       233 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  312 (437)
                      +++.+++..+++|| |||+++++|++++|++||++|+|+++|++                     |++|||+|+||++|+
T Consensus       230 ~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~  287 (406)
T 1s1f_A          230 SEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE---------------------IRPRAIDELLRWIPH  287 (406)
T ss_dssp             HHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhCCC
Confidence            99999999999999 99999999999999999999999999853                     689999999999999


Q ss_pred             Cc--ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHH
Q 013728          313 AI--GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERL  390 (437)
Q Consensus       313 ~~--~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~  390 (437)
                      ++  .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|+++|++
T Consensus       288 ~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~  361 (406)
T 1s1f_A          288 RNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP------NPHVSFGFGPHYCPGGMLARL  361 (406)
T ss_dssp             BSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC--------CCCCTTCCSTTCCTTHHHHHH
T ss_pred             ccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC------CCCCCCCCCCCCCcCHHHHHH
Confidence            99  8899999999999999999999999999999999999999999999986      358999999999999999999


Q ss_pred             HHHHHHHHHHhhC-ceEeeCCCCCc--ccccccCCCCCccEEEe
Q 013728          391 LILVFIHNMIKRF-KWDLLIPDEKF--GYDPMLSPSQGLPIRLQ  431 (437)
Q Consensus       391 ~~~~~l~~ll~~f-~~~~~~~~~~~--~~~~~~~~~~~~~v~~~  431 (437)
                      |++++++.|+++| ++++.++...+  ..+...++..+++|++.
T Consensus       362 e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          362 ESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             HHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             HHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence            9999999999999 79997653343  33456788889999873


No 50 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=3.8e-56  Score=422.54  Aligned_cols=335  Identities=21%  Similarity=0.292  Sum_probs=278.0

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC------hhhh---Hhh--h-cccccccc
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW------PSSV---GKL--F-KTCLLMKA  128 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~------~~~~---~~~--~-g~~l~~~~  128 (437)
                      .+++.++.++ ++||| ||+ + ++.++++++|++.+++++.+++  |..+.      ....   ..+  + +.+++..+
T Consensus        26 ~~p~~~~~~l-~~~Gp-v~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (419)
T 1q5d_A           26 EDPFPAIERL-REATP-IFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP   99 (419)
T ss_dssp             TCCHHHHHHH-HHHCS-EEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred             hChHHHHHHH-HhhCC-ccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC
Confidence            5899999999 78999 999 5 7789999999999999998875  55432      1101   122  2 45788889


Q ss_pred             ChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------ccccc--------------
Q 013728          129 GDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSF--------------  174 (437)
Q Consensus       129 g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~--------------  174 (437)
                      |+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                    .+++.              
T Consensus       100 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~  178 (419)
T 1q5d_A          100 PEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRFGSA  178 (419)
T ss_dssp             HHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHHHHH
T ss_pred             chHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            99999999999 88999999999999999999999874321                    00000              


Q ss_pred             ------CccCCC--hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCch-hHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHh
Q 013728          175 ------PVNFPG--TTFYKSIRAADAIREELIKLIAKQTREALGSKQ-DLLSRLVVIADSNGKFLTEMEVADNILLLLFS  245 (437)
Q Consensus       175 ------~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~a  245 (437)
                            +..+|.  ...++..++...+.+++.+.+++ +++.  ... |+++.|++..+ ++..++++++.+++.++++|
T Consensus       179 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~~dll~~ll~~~~-~~~~l~~~ei~~~~~~l~~A  254 (419)
T 1q5d_A          179 TARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDE-RRRN--PLENDVLTMLLQAEA-DGSRLSTKELVALVGAIIAA  254 (419)
T ss_dssp             HHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSCHHHHHHHHHH-SSTTCCHHHHHHHHHHHHHH
T ss_pred             HHHhcccccccCChHHHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHH
Confidence                  111111  12345566777788888888887 6652  245 89999998753 45569999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-cccccccccc
Q 013728          246 SHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDF  324 (437)
Q Consensus       246 g~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~  324 (437)
                      |+|||+++++|++++|++||++|+|+++|+                     .||+|||+|+||++|+++ .++|.+.+|+
T Consensus       255 G~dTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~  313 (419)
T 1q5d_A          255 GTDTTIYLIAFAVLNLLRSPEALELVKAEP---------------------GLMRNALDEVLRFDNILRIGTVRFARQDL  313 (419)
T ss_dssp             HSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBSSEEEEEESSCE
T ss_pred             hhHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHHHHHHhCCccccccceeeCCCe
Confidence            999999999999999999999999999983                     478999999999999999 8899999999


Q ss_pred             ccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-
Q 013728          325 TYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-  403 (437)
Q Consensus       325 ~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-  403 (437)
                      +++||.||||+.|.++.+++||||++|+||++|+|||+      ...++|||+|+|.|+|+++|++|++++++.|+++| 
T Consensus       314 ~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~  387 (419)
T 1q5d_A          314 EYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD------TSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFP  387 (419)
T ss_dssp             EETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCT
T ss_pred             EECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC------CCCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999993      35689999999999999999999999999999999 


Q ss_pred             ceEeeCCCCCcccccccCCCCCccEEEeecc
Q 013728          404 KWDLLIPDEKFGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      ++++.++ ..+..+.+..+..+++|+++||.
T Consensus       388 ~~~~~~~-~~~~~~~~~~~~~~l~v~~~~r~  417 (419)
T 1q5d_A          388 EMKLKET-PVFGYHPAFRNIESLNVILKPSK  417 (419)
T ss_dssp             TCEECSC-CEECCCSSBCCEEECEEESSCC-
T ss_pred             CeEECCC-cccccccccCCCceeEEEEecCC
Confidence            8999754 34445667788999999999985


No 51 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=2.7e-56  Score=421.74  Aligned_cols=336  Identities=16%  Similarity=0.185  Sum_probs=273.8

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCC--CcEEEEeCcchhhhcccccccceeccCh-h----hhHhhh---ccccccccCh
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLG--EDMIVFCGTAGHKLLFSNENKLVRTWWP-S----SVGKLF---KTCLLMKAGD  130 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~--~~~v~v~~~~~i~~i~~~~~~~~~~~~~-~----~~~~~~---g~~l~~~~g~  130 (437)
                      +++|.++.+++ +||| |+++++++  .+.+++++++.+++|++++.  |.+... .    .+..+.   +.+++..+|+
T Consensus        27 ~~p~~~~~~l~-~~Gp-v~~~~~~~g~~~~~vv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  102 (411)
T 2dkk_A           27 PEFDPVLAELM-REGP-LTRVRLPHGEGWAWLATRYDDVKAITNDPR--FGRAEVTQRQITRLAPHFKPRPGSLAFADQP  102 (411)
T ss_dssp             SCCCHHHHHHH-TTCS-EEEEECSBSBSCEEEECSHHHHHHHTTCTT--EESGGGGGSCBCBSSSCCCCCTTCSTTCCTT
T ss_pred             ccccHHHHHHH-hcCC-eEeeecCCCceeEEEEcCHHHHHHHHcCCC--cccCCCCCCCccccccchhccccccccCCch
Confidence            46779999997 8999 99999764  78999999999999998742  443221 1    122222   4577888999


Q ss_pred             HHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCcc------------
Q 013728          131 DAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPVN------------  177 (437)
Q Consensus       131 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~------------  177 (437)
                      .|+++|+.+ .+.|++.+++.+.+.+.+.++++++....                     .+++.+..            
T Consensus       103 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~  181 (411)
T 2dkk_A          103 DHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSEVMGVPAADRERVHSWTRQI  181 (411)
T ss_dssp             HHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHHHHTCCSSHHHHHHHHHGGG
T ss_pred             HHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            999999999 88899999999999999999988874321                     01111110            


Q ss_pred             CC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHH
Q 013728          178 FP-GTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITL  256 (437)
Q Consensus       178 ~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~  256 (437)
                      +. ....++..++...+.+++.+.+++ +++.  ...|+++.|++. + ++..++++++.+++..+++|| |||+++++|
T Consensus       182 ~~~~~~~~~~~~~~~~l~~~~~~~i~~-r~~~--~~~dll~~ll~~-~-~~~~ls~~el~~~~~~l~~AG-eTta~~l~~  255 (411)
T 2dkk_A          182 ISTSGGAEAAERAKRGLYGWITETVRA-RAGS--EGGDVYSMLGAA-V-GRGEVGETEAVGLAGPLQIGG-EAVTHNVGQ  255 (411)
T ss_dssp             CSSCSCSHHHHHHHHHHHHHHHHHHHT-TTTC--CSSCHHHHHHHH-H-HTTSSCTTSHHHHHHHHHHTH-HHHHHHHHH
T ss_pred             HhccchHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHh-c-CCCCCCHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence            00 001233445666677777777766 4431  256899999987 3 445699999999999999999 999999999


Q ss_pred             HHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-c-cccccccccccCCeeeCCC
Q 013728          257 LLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-G-AFREALVDFTYSGYTIPKG  334 (437)
Q Consensus       257 ~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~-~~R~~~~d~~i~g~~ip~G  334 (437)
                      ++++|++||++|+|+++|++                     |+++||+|+||++|+++ . ++|.+.+|++++||.||||
T Consensus       256 ~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~G  314 (411)
T 2dkk_A          256 MLYLLLTRRELMARMRERPG---------------------ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAG  314 (411)
T ss_dssp             HHHHHHHSHHHHHHHHHCTT---------------------CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTT
T ss_pred             HHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCC
Confidence            99999999999999999853                     67999999999999999 7 8999999999999999999


Q ss_pred             CEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCC
Q 013728          335 WKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEK  413 (437)
Q Consensus       335 ~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~  413 (437)
                      +.|.++.+++||||++|+||++|+|+||.      ..++|||+|+|.|+|+++|++|++++++.|+++| ++++.++..+
T Consensus       315 t~V~~~~~~~~rdp~~f~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~  388 (411)
T 2dkk_A          315 EPVYVSYLAANRDPDVFPDPDRIDLDRDP------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQ  388 (411)
T ss_dssp             CEEEECHHHHTTCTTTSSSTTSCCCSCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGG
T ss_pred             CEEEeChhhhcCChhhCCCCCCCCCCCCC------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCccc
Confidence            99999999999999999999999999986      4589999999999999999999999999999999 9999765333


Q ss_pred             c--ccccccCCCCCccEEEeecc
Q 013728          414 F--GYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       414 ~--~~~~~~~~~~~~~v~~~~r~  434 (437)
                      +  ..+....+..+++|++++|+
T Consensus       389 ~~~~~~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          389 VAWRRKTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             CCBCCSSSBCCBSCCEEECCCCC
T ss_pred             cccccCcccCCcceeEEEeccCC
Confidence            3  33557788899999999985


No 52 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=2.9e-56  Score=431.54  Aligned_cols=370  Identities=20%  Similarity=0.283  Sum_probs=271.8

Q ss_pred             CCCCCCCCCcccccccchHHHHhhccCC-CchHHHHHHHHhhCCceEEEeeCC-------CcEEEEeCcchhhhcccccc
Q 013728           34 PNPHLPPGNLGWPVIGETLGFIRAGFEG-KPERFIRERMEKYDSRVFKTCLLG-------EDMIVFCGTAGHKLLFSNEN  105 (437)
Q Consensus        34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~-~~~~~~~~~~~~yG~~v~~~~~~~-------~~~v~v~~~~~i~~i~~~~~  105 (437)
                      .+.+.||||++||++|+++++.+..+.. +++.++.+++++||++||++++++       ...|++++.+..+.++....
T Consensus         6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~   85 (473)
T 3dan_A            6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK   85 (473)
T ss_dssp             SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence            5678899999999999999987554446 899999999999998899999864       34455566655556654211


Q ss_pred             ----cceeccChhhhHhhhc----cccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------
Q 013728          106 ----KLVRTWWPSSVGKLFK----TCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------  169 (437)
Q Consensus       106 ----~~~~~~~~~~~~~~~g----~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------  169 (437)
                          ..+.+.++... .++|    .+++..+|+.|+++|+.+ .+.|++ .++.+.+.+.+.++++++....        
T Consensus        86 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~~~v  162 (473)
T 3dan_A           86 VEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKN-SSNRVIPQFETTYTELFEGLEAELAKNGKA  162 (473)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred             eeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence                11222233222 3344    145678999999999999 888898 5889999999999988874321        


Q ss_pred             ----------------cccccCccCCC--hhhHHHHHHHH----------HHHHHHHHHHHHHHH-----------HhcC
Q 013728          170 ----------------GVMSFPVNFPG--TTFYKSIRAAD----------AIREELIKLIAKQTR-----------EALG  210 (437)
Q Consensus       170 ----------------~~~~~~~~~p~--~~~~~~~~~~~----------~~~~~~~~~i~~~~~-----------~~~~  210 (437)
                                      .+++.+.....  ..+........          .+..++.+++.+ ++           ....
T Consensus       163 dl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~-~~~~~~~~~~~~~~~~~  241 (473)
T 3dan_A          163 AFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLH-TFRLPAFLIKSTYNKLY  241 (473)
T ss_dssp             ECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHS-SSCCCGGGTHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHHHHhccchhhhcchHHHHHHHhh-hccchHhhhhhchhhhH
Confidence                            11111111100  00011111000          001222332221 11           0000


Q ss_pred             C-chhHHHHHHHHHhhcCCCCCHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHcc-CcHHHHHHHHHHHHhhhhcccCCC
Q 013728          211 S-KQDLLSRLVVIADSNGKFLTEMEVADNILLLL-FSSHDTSSSAITLLLKYLGQ-MPQVFENVLREQIGIAESKEQGEL  287 (437)
Q Consensus       211 ~-~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~l~~-~p~~~~kl~~Ei~~~~~~~~~~~~  287 (437)
                      + -.++++.+++..++.+  ++++++..+++.++ ++|++||+++++|++++|++ ||++|+++|+|++++++.. .+..
T Consensus       242 ~~~~~~~~~ll~~~~~~~--l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~-~~~~  318 (473)
T 3dan_A          242 DYFQSVATPVMEQAEKLG--VPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSY-GDGN  318 (473)
T ss_dssp             HHHHHHCHHHHHHHHHHT--CCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH-STTS
T ss_pred             HHHHHHHHHHHHhHhhcC--CCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc-cCCC
Confidence            1 2344555666554444  99999998886666 88899999999999999999 7999999999999997731 3467


Q ss_pred             CCHHHhhcChHHHHHHHHhhcCCCCCccccccccccccc----CCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCC
Q 013728          288 LKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTY----SGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFE  363 (437)
Q Consensus       288 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  363 (437)
                      ++++++++||||+|||+|+||++|+++...|++.+|+++    +||.||||+.|.++.+.+||||++|+||++|||+||+
T Consensus       319 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~  398 (473)
T 3dan_A          319 VTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFV  398 (473)
T ss_dssp             CCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTS
T ss_pred             CCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccC
Confidence            999999999999999999999999999776779999999    9999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCC---------CCCccHHHHHHHHHHHHHHHHhhCceEeeCC
Q 013728          364 REGATPYSYVPFGGGP---------RMCPGYEFERLLILVFIHNMIKRFKWDLLIP  410 (437)
Q Consensus       364 ~~~~~~~~~~~FG~G~---------~~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  410 (437)
                      +.+.....+++||.|+         |.|+|+++|.+|++++++.|+++|++...++
T Consensus       399 ~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  454 (473)
T 3dan_A          399 GDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL  454 (473)
T ss_dssp             GGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence            8643444555666555         9999999999999999999999999776543


No 53 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=9.1e-57  Score=424.42  Aligned_cols=336  Identities=18%  Similarity=0.205  Sum_probs=273.2

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChh---hhHhhhccccccccChHHHHHHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPS---SVGKLFKTCLLMKAGDDAKRMRR  137 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~---~~~~~~g~~l~~~~g~~~~~~R~  137 (437)
                      .+++.++.+|+++ || |+++..++ +.++++|++.+++++++++ .|.++...   ......+.+++..+|+.|+++|+
T Consensus        24 ~~p~~~~~~l~~~-Gp-v~~~~~~~-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~   99 (396)
T 3oft_A           24 QDYFAAWKTLLDG-PG-LVWSTANG-GHWIAARGDVVRELWGDAE-RLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRT   99 (396)
T ss_dssp             TCHHHHHHGGGGS-CS-EEEECSTT-SEEEECSHHHHHHHHHCTT-TEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHH
T ss_pred             cChHHHHHHHHhc-CC-eeeecCCC-CEEEEcCHHHHHHHHcCcc-cccCCcccCCCccccccccCccccCCcHHHHHHH
Confidence            6899999999999 99 99998874 5899999999999997764 45433211   11122233667889999999999


Q ss_pred             hhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCcc------------CCChhhHH
Q 013728          138 MMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPVN------------FPGTTFYK  185 (437)
Q Consensus       138 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~------------~p~~~~~~  185 (437)
                      .+ .+.|++..++.+.+.+.+.++++++....                    .++..+..            +.....++
T Consensus       100 ~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~  178 (396)
T 3oft_A          100 PV-MKGLASRFVVALEPKVQAVARKLMESLRPRGSCDFVSDFAEILPLNIFLTLIDVPLEDRPRLRQLGVQLTRPDGSMT  178 (396)
T ss_dssp             HH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCSSCC
T ss_pred             Hh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCHHH
Confidence            99 89999999999999999999999985322                    11111110            00001233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCc
Q 013728          186 SIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMP  265 (437)
Q Consensus       186 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p  265 (437)
                      ..++.+.+.+++.+.+++ +++.  ...|+++.|++... ++..++++++.+++..+++||+|||+++++|++++|++||
T Consensus       179 ~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~-~~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P  254 (396)
T 3oft_A          179 VEQLKQAADDYLWPFIEK-RMAQ--PGDDLFSRILSEPV-GGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHP  254 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHTSCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCH
Confidence            456677888888888887 6652  36789999998644 4445999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeecccccc
Q 013728          266 QVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTGSTH  345 (437)
Q Consensus       266 ~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~  345 (437)
                      ++|+|+++|++                     |+++||+|+||++|++ .++|.+.+|++++||.||||+.|.++.+++|
T Consensus       255 ~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~  312 (396)
T 3oft_A          255 EDQRLLRERPD---------------------LIPAAADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHN  312 (396)
T ss_dssp             HHHHHHHHCGG---------------------GHHHHHHHHHHHCCCB-EEEEEESSCEEETTEEECTTCEEEEETHHHH
T ss_pred             HHHHHHHhCHH---------------------hHHHHHHHHHHhcCcc-cCceecCCCEEECCEEECCCCEEEeChHHhC
Confidence            99999999964                     6799999999999999 8999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCcccccccCCCC
Q 013728          346 KDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKFGYDPMLSPSQ  424 (437)
Q Consensus       346 ~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~  424 (437)
                      |||++|+||++|+|+||+    .+..++|||+|+|.|+|+++|++|++++++.|+++| ++++.+++.....+.......
T Consensus       313 rdp~~~~dp~~F~PeR~~----~~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~~~~~~~~~~  388 (396)
T 3oft_A          313 LDPASFEAPEEVRFDRGL----APIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMKGGNVGACT  388 (396)
T ss_dssp             TCTTTSSSTTSCCSCCCC----CGGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSCCEEECSSBCEEE
T ss_pred             CCcccCCCcCccCCCCCC----CCCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCCceeccccccCcc
Confidence            999999999999999997    456899999999999999999999999999999999 999974332211233445555


Q ss_pred             CccEEEe
Q 013728          425 GLPIRLQ  431 (437)
Q Consensus       425 ~~~v~~~  431 (437)
                      .++|+++
T Consensus       389 ~lpv~~~  395 (396)
T 3oft_A          389 ALPLVWR  395 (396)
T ss_dssp             ECEEEEC
T ss_pred             cceEEeC
Confidence            6888774


No 54 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=1.3e-55  Score=418.02  Aligned_cols=334  Identities=20%  Similarity=0.256  Sum_probs=273.0

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceeccC-h-hh---hHhh-hccccccccChHHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTWW-P-SS---VGKL-FKTCLLMKAGDDAK  133 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~~-~-~~---~~~~-~g~~l~~~~g~~~~  133 (437)
                      .+++.++.+| ++||| |+++++ ++.++++++|++.+++++.++.  +.... . ..   +... .+.+++..+|+.|+
T Consensus        37 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~i~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  112 (417)
T 2y5n_A           37 LTLAGRYGEL-QETEP-VSRVRPPYGEEAWLVTRYEDVRAVLGDGR--FVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS  112 (417)
T ss_dssp             CCCCHHHHHH-HHHCS-EEEEECSBSCCEEEECSHHHHHHHHTCTT--EESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred             cCchHHHHHH-HhcCC-eEeeccCCCceEEEECCHHHHHHHHcCCC--cccCccccccccccCcccccccCccCCchHHH
Confidence            5899999999 89999 999997 7899999999999999998754  33221 1 11   1121 34477888999999


Q ss_pred             HHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCc--------------cC
Q 013728          134 RMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPV--------------NF  178 (437)
Q Consensus       134 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~--------------~~  178 (437)
                      ++|+.+ .+.|++..++.+.+.+.+.++++++....                     .+++.+.              ..
T Consensus       113 ~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~  191 (417)
T 2y5n_A          113 RLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLST  191 (417)
T ss_dssp             HHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTSTT
T ss_pred             HHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHHHcCCCHHHHHHHHHHHHHHhcc
Confidence            999999 88899999999999999888888764211                     0001110              00


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 013728          179 PGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLL  258 (437)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l  258 (437)
                      .....++..++...+.+++.+.+++ +++.  ...|+++.|++..+ ++..++++++.+++..+++||+|||+++++|++
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l  267 (417)
T 2y5n_A          192 AEVTAEEMQEAAEQAYAYMGDLIDR-RRKE--PTDDLVSALVQARD-QQDSLSEQELLDLAIGLLVAGYESTTTQIADFV  267 (417)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            0011234556677788888888887 6652  25689999997643 344599999999999999999999999999999


Q ss_pred             HHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc--ccccccccccccCCeeeCCCCE
Q 013728          259 KYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI--GAFREALVDFTYSGYTIPKGWK  336 (437)
Q Consensus       259 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~--~~~R~~~~d~~i~g~~ip~G~~  336 (437)
                      ++|++||++|+|+++|+                     .||+|||+|+||++|+++  .++|.+.+|++++||.||||+.
T Consensus       268 ~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~  326 (417)
T 2y5n_A          268 YLLMTRPELRRQLLDRP---------------------ELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEP  326 (417)
T ss_dssp             HHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCE
T ss_pred             HHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCE
Confidence            99999999999999884                     368999999999999999  7899999999999999999999


Q ss_pred             EeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCc-
Q 013728          337 LHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKF-  414 (437)
Q Consensus       337 v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~-  414 (437)
                      |.++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|+++|++|++++++.|+++| ++++.++..++ 
T Consensus       327 V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~  400 (417)
T 2y5n_A          327 VLASTGAANRDQAQFPDADRIDVDRTP------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLR  400 (417)
T ss_dssp             EEECHHHHTTCTTTSTTTTSCCTTCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCC
T ss_pred             EEeChhhhCCCcccCCCccccCCCCCC------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccce
Confidence            999999999999999999999999973      4689999999999999999999999999999999 69997653343 


Q ss_pred             -ccccccCCCCCccEEE
Q 013728          415 -GYDPMLSPSQGLPIRL  430 (437)
Q Consensus       415 -~~~~~~~~~~~~~v~~  430 (437)
                       ..+...++...++|++
T Consensus       401 ~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          401 WSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             BCCCSSBCCBSCCEEEC
T ss_pred             eccCcccCCcceeEEeC
Confidence             3345667888888874


No 55 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.5e-55  Score=417.31  Aligned_cols=337  Identities=20%  Similarity=0.280  Sum_probs=271.8

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc----Chh--hhH---hh----hccccccc
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW----WPS--SVG---KL----FKTCLLMK  127 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~----~~~--~~~---~~----~g~~l~~~  127 (437)
                      .+++.++.+| ++||+ ||++++++.++++++|++.+++++.+++  +...    +..  .+.   .+    .+.+++..
T Consensus        15 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   90 (408)
T 1odo_A           15 ADHHTEHRTL-REGGP-ATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTA   90 (408)
T ss_dssp             TTHHHHHHHH-HTTCS-EEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred             CChHHHHHHH-HHhCC-eEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccccc
Confidence            5899999999 99999 9999998889999999999999998765  2211    110  011   01    23477888


Q ss_pred             cChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhh----c-------------------cccccCcc-------
Q 013728          128 AGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYW----E-------------------GVMSFPVN-------  177 (437)
Q Consensus       128 ~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~-------  177 (437)
                      +|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++...    .                   .+++.+..       
T Consensus        91 ~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~  169 (408)
T 1odo_A           91 YGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDGFRA  169 (408)
T ss_dssp             CHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred             CChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHHHhCCCHHHHHHHHH
Confidence            999999999999 8899999999999999999999887543    1                   00000000       


Q ss_pred             ------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHhhhhh
Q 013728          178 ------FPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSN--GKFLTEMEVADNILLLLFSSHDT  249 (437)
Q Consensus       178 ------~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~--~~~lt~~~i~~~~~~~~~ag~~t  249 (437)
                            -......+..++...+.+++.+++++ +++.  ...|+++.|++..+++  +..++++++.+++..+++||+||
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dT  246 (408)
T 1odo_A          170 LVDGVFDTTLDQAEAQANTARLYEVLDQLIAA-KRAT--PGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYET  246 (408)
T ss_dssp             HHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH-HhhC--CCCCHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhHHH
Confidence                  00001123344556677777777777 6542  2568999999875432  44599999999999999999999


Q ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccC-
Q 013728          250 SSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYS-  327 (437)
Q Consensus       250 t~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~-  327 (437)
                      |+++++|++++|++||++|+|+++|+                     +|++|||+|+||++|+++ .++|.+.+|++++ 
T Consensus       247 t~~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~  305 (408)
T 1odo_A          247 TVNVIDQAVHTLLTRPDQLALVRKGE---------------------VTWADVVEETLRHEPAVKHLPLRYAVTDIALPD  305 (408)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHTS---------------------SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTT
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCC
Confidence            99999999999999999999999873                     368999999999999998 5889999999999 


Q ss_pred             CeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceE
Q 013728          328 GYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWD  406 (437)
Q Consensus       328 g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~  406 (437)
                      ||.||||+.|.++.+++||||++|+||++|+|||+      ...++|||+|+|.|+|+++|++|++++++.|+++| +++
T Consensus       306 G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  379 (408)
T 1odo_A          306 GRTIARGEPILASYAAANRHPDWHEDADTFDATRT------VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLR  379 (408)
T ss_dssp             SCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CcEECCCCEEEeChhhhcCChhhcCCccccCCCCC------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcce
Confidence            99999999999999999999999999999999993      45799999999999999999999999999999999 799


Q ss_pred             eeCCCCCcc--cccccCCCCCccEEEee
Q 013728          407 LLIPDEKFG--YDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       407 ~~~~~~~~~--~~~~~~~~~~~~v~~~~  432 (437)
                      +.++...++  .+.+..+..+++|+++|
T Consensus       380 ~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          380 LADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             ESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             ecCCccccccccCccccCcccceEEecC
Confidence            975433333  34577889999999876


No 56 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.5e-56  Score=419.04  Aligned_cols=335  Identities=17%  Similarity=0.196  Sum_probs=275.2

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChhhhHhhhccccccccChHHHHHHHhhh
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSVGKLFKTCLLMKAGDDAKRMRRMMM  140 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~~~~~R~~~~  140 (437)
                      .+++.++.++++ ||| ||++.   .++++++|++.+++++++++ .|.+........+.+.+++..+|+.|+++|+.+ 
T Consensus        18 ~~p~~~~~~l~~-~Gp-v~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-   90 (398)
T 2xkr_A           18 REARAAYRWMRA-NQP-VFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIRPDQPALPMMIDMDDPAHLLRRKLV-   90 (398)
T ss_dssp             TTHHHHHHHHHH-HCS-EEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSSTTSCCCSSGGGCCTTHHHHHHHHH-
T ss_pred             cChhHHHHHHHh-cCC-eeecC---CCeEEEecHHHHHHHHhCcc-cccCccccCCcccccccccccCchHHHHHHHHh-
Confidence            689999999987 999 99764   37999999999999998765 455432211122345578888999999999999 


Q ss_pred             hccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccC--------------------ccCCC
Q 013728          141 MSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFP--------------------VNFPG  180 (437)
Q Consensus       141 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~--------------------~~~p~  180 (437)
                      .+.|++..++.+.+.+.+.++++++....                    .+++.+                    .++| 
T Consensus        91 ~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~p-  169 (398)
T 2xkr_A           91 NAGFTRKRVKDKEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDMLGVRPEQRDMFLRWSDDLVTFLSSHVSQ-  169 (398)
T ss_dssp             GGGSCHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHTSCCCH-
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhccCcccch-
Confidence            88999999999999999999999874321                    001111                    1111 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 013728          181 TTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKY  260 (437)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~  260 (437)
                      ...++..++...+.+++.+.+++ +++.  ...|+++.|++... ++..++++++.+++..+++||+|||+++++|++++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~  245 (398)
T 2xkr_A          170 EDFQITMDAFAAYNDFTRATIAA-RRAD--PTDDLVSVLVSSEV-DGERLSDDELVMETLLILIGGDETTRHTLSGGTEQ  245 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            12234455666777788888877 6551  26789999997653 34459999999999999999999999999999999


Q ss_pred             HccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeec
Q 013728          261 LGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWS  340 (437)
Q Consensus       261 l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~  340 (437)
                      |++||++|+|+++|++                     |++|||+|+||++|+++.++|.+.+|++++||.||||+.|+++
T Consensus       246 L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~  304 (398)
T 2xkr_A          246 LLRNRDQWDLLQRDPS---------------------LLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLL  304 (398)
T ss_dssp             HHHSHHHHHHHHHCGG---------------------GHHHHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEE
T ss_pred             HHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhcccccCcceEECCCeeECCEEECCCCEEEeC
Confidence            9999999999999963                     7899999999999999998999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCc---cc
Q 013728          341 TGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKF---GY  416 (437)
Q Consensus       341 ~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~---~~  416 (437)
                      .+++||||++|+||++|+||||.      ..++|||.|+|.|+|+++|++|++++++.|+++| ++++.++ ..+   ..
T Consensus       305 ~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~  377 (398)
T 2xkr_A          305 FESANFDEAVFCEPEKFDVQRNP------NSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVAD-DSVLPLRP  377 (398)
T ss_dssp             HHHHHTCTTTSSSTTSCCTTCSS------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCT-TCCCCBCC
T ss_pred             hhhhcCChhhCCCCCeeCCCCCC------CCCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCC-cceecccC
Confidence            99999999999999999999975      2489999999999999999999999999999999 6999743 333   34


Q ss_pred             ccccCCCCCccEEEeeccC
Q 013728          417 DPMLSPSQGLPIRLQPHQC  435 (437)
Q Consensus       417 ~~~~~~~~~~~v~~~~r~~  435 (437)
                      +....+..+++|+++||..
T Consensus       378 ~~~~~~~~~lpv~~~p~~r  396 (398)
T 2xkr_A          378 ANFVSGLESMPVVFTPSPP  396 (398)
T ss_dssp             CSSBCCBSCCEEECCCCCC
T ss_pred             cccccCccceeEEecCCCC
Confidence            5567788899999998863


No 57 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=1.2e-56  Score=424.67  Aligned_cols=338  Identities=21%  Similarity=0.255  Sum_probs=272.1

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceecc-----Chh--hhHh---hhccccccccC
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTW-----WPS--SVGK---LFKTCLLMKAG  129 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~-----~~~--~~~~---~~g~~l~~~~g  129 (437)
                      .+++..+.+| ++||+ ||++++ ++.++++++|++.+++++.+++  +...     +..  .+..   ..+.+++..+|
T Consensus        24 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   99 (408)
T 3abb_A           24 YQPPKAYEER-RGESP-LTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDD   99 (408)
T ss_dssp             TSCCHHHHHH-CCSSS-EEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTCCT
T ss_pred             cCchHHHHHH-HhcCC-eeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccCCc
Confidence            5799999999 99999 999998 7889999999999999998754  2221     110  0111   12346777899


Q ss_pred             hHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------cccc-cC-------ccCCChhh---------
Q 013728          130 DDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------GVMS-FP-------VNFPGTTF---------  183 (437)
Q Consensus       130 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~-~~-------~~~p~~~~---------  183 (437)
                      +.|+++|+.+ .+.|++..++.+.+.+.+.++++++....         .+.. ++       +..+....         
T Consensus       100 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~  178 (408)
T 3abb_A          100 PVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICELLGVPYGDHDFFEECSRN  178 (408)
T ss_dssp             THHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHH
T ss_pred             hHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            9999999999 88899999999999999999998874321         0000 00       00110000         


Q ss_pred             -------HHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHH
Q 013728          184 -------YKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITL  256 (437)
Q Consensus       184 -------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~  256 (437)
                             ++..++.+.+.+++.+.+++ +++.  ...|+++.|++..+ ++..++++++.+++.++++||+|||+++++|
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~  254 (408)
T 3abb_A          179 FVGAATSAEADAAFGELYTYLHGLVGR-KQAE--PEDGLLDELIARQL-EEGDLDHDEVVMIALVLLVAGHETTVNAIAL  254 (408)
T ss_dssp             HC------CCSSHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcccchHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   11223455667777777777 6542  25689999998754 3445999999999999999999999999999


Q ss_pred             HHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCE
Q 013728          257 LLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWK  336 (437)
Q Consensus       257 ~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~  336 (437)
                      ++++|++||++|+|+++|+                     .|++|||+|+||++|+++.++|.+.+|++++||.||||+.
T Consensus       255 ~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~G~~Ip~Gt~  313 (408)
T 3abb_A          255 GALTLIQHPEQIDVLLRDP---------------------GAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDA  313 (408)
T ss_dssp             HHHHHHTCGGGGGGGGSCH---------------------HHHHHHHHHHHHHHCSSCEEEEEESSCEEETTEEECTTCE
T ss_pred             HHHHHHhCHHHHHHHHhCH---------------------HhHHHHHHHHHHhcCcccccceEeCCCeEECCEEECCCCE
Confidence            9999999999999999874                     2689999999999999998899999999999999999999


Q ss_pred             EeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCc-
Q 013728          337 LHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKF-  414 (437)
Q Consensus       337 v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~-  414 (437)
                      |.++.+++||||++|+||++|+||||      ...++|||+|+|.|+|+++|++|++++++.|+++| ++++.++...+ 
T Consensus       314 V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~  387 (408)
T 3abb_A          314 VLVSITLMNRDAKAYENPDIFDARRN------ARHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVP  387 (408)
T ss_dssp             EEEEHHHHHTCTTTSSSTTSCCTTSC------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSC
T ss_pred             EEeChHHhcCCcccCCCcccCCCCCC------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCccccc
Confidence            99999999999999999999999995      35689999999999999999999999999999999 89997543333 


Q ss_pred             -ccccccCCCCCccEEEeecc
Q 013728          415 -GYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       415 -~~~~~~~~~~~~~v~~~~r~  434 (437)
                       ..+.+..+..+++|++++|.
T Consensus       388 ~~~~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          388 IKAGHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             BCCTTSCCSBSCCEEECSCCC
T ss_pred             cccCcccCCcceeEEEeCCCC
Confidence             33456788999999999874


No 58 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=5.8e-57  Score=427.04  Aligned_cols=349  Identities=16%  Similarity=0.230  Sum_probs=275.6

Q ss_pred             ccchHHHHhhccCCCchHHHHHHHHhhCCceE-----EEeeCCCcEEEEeCcchhhhcccccccceeccChh--hhH--h
Q 013728           48 IGETLGFIRAGFEGKPERFIRERMEKYDSRVF-----KTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPS--SVG--K  118 (437)
Q Consensus        48 ~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~-----~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~--~~~--~  118 (437)
                      .|+.+++.......+|+.++.+| ++||| ||     ++++  .++++++|++.+++++.++. .|.++...  .+.  .
T Consensus        12 ~~~~~~~~~~~~~~~p~~~~~~l-~~~Gp-v~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~   86 (414)
T 2uuq_A           12 MSHEFQLATAETWPNPWPMYRAL-RDHDP-VHHVVPPQRPE--YDYYVLSRHADVWSAARDHQ-TFSSAQGLTVNYGELE   86 (414)
T ss_dssp             -CCSCCCCCTTTTTCCHHHHHHH-HHHCS-EEEECCTTCGG--GCEEEECSHHHHHHHHHCTT-TEESTTCSSSCTTHHH
T ss_pred             hcCccCcCChhhccCchHHHHHH-HhcCC-EEcccccccCC--CCEEEEcCHHHHHHHHcCch-hccCCCCcccccCccc
Confidence            34444444433336899999998 57999 99     8776  68999999999999998763 45543221  111  2


Q ss_pred             ----hhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------ccccc
Q 013728          119 ----LFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSF  174 (437)
Q Consensus       119 ----~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~  174 (437)
                          ..+.+++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                    .+++.
T Consensus        87 ~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~vdl~~~~~~~~~~~vi~~~~G~  165 (414)
T 2uuq_A           87 MIGLHDTPPMVMQDPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAHYLGV  165 (414)
T ss_dssp             HHTCSSSCCGGGCCTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTTHHHHHHHHHHTTC
T ss_pred             ccccccccccccCCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHHhCC
Confidence                224578888999999999999 89999999999999999999988874321                    11111


Q ss_pred             Ccc-----------------C-CChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhh-cCCCCCHHHH
Q 013728          175 PVN-----------------F-PGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADS-NGKFLTEMEV  235 (437)
Q Consensus       175 ~~~-----------------~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~-~~~~lt~~~i  235 (437)
                      +..                 + |..  .+..++...+.+++.+.+++ +++.  ...|+++.|++...+ ++..++++++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~~~~~~~ls~~ei  240 (414)
T 2uuq_A          166 PEEDWTQFDGWTQAIVAANAVDGAT--TGALDAVGSMMAYFTGLIER-RRTE--PADDAISHLVAAGVGADGDTAGTLSI  240 (414)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHH-HTTS--CCSSHHHHHHHTTTTCTTCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhhcccCCch--hHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhcccccCCCCCCHHHH
Confidence            110                 1 110  12334455666677777766 5431  257899999976531 3445899999


Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcc
Q 013728          236 ADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIG  315 (437)
Q Consensus       236 ~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~  315 (437)
                      .+++..+++||+|||+++++|++++|++||++|+|+++|+                     +|++|||+|+||++|+++.
T Consensus       241 ~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~  299 (414)
T 2uuq_A          241 LAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP---------------------EGIPDAVEELLRLTSPVQG  299 (414)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSBCC
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHHHHHHhCCCcCC
Confidence            9999999999999999999999999999999999999985                     4889999999999999998


Q ss_pred             cccccccccccCCeeeCCCCEEeeccccccCCCCCC-CCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHH
Q 013728          316 AFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLF-PNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILV  394 (437)
Q Consensus       316 ~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~  394 (437)
                      ++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.      ..++|||.|+|.|+|+++|++|+++
T Consensus       300 ~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~~~  373 (414)
T 2uuq_A          300 LARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP------RNILTFSHGAHHCLGAAAARMQCRV  373 (414)
T ss_dssp             EEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC------CSCCTTCSSTTCCTTHHHHHHHHHH
T ss_pred             cceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC------CCCcCCCCCCccCCCHHHHHHHHHH
Confidence            899999999999999999999999999999999999 999999999985      4589999999999999999999999


Q ss_pred             HHHHHHhhC-ceEeeCCCCCcccccccCCCCCccEEEeecc
Q 013728          395 FIHNMIKRF-KWDLLIPDEKFGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       395 ~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      +++.|+++| ++++.+++.++..+.+..+..+++|+++||.
T Consensus       374 ~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~lpv~~~~r~  414 (414)
T 2uuq_A          374 ALTELLARCPDFEVAESRIVWSGGSYVRRPLSVPFRVTSSR  414 (414)
T ss_dssp             HHHHHHHHCCSEEECGGGCEECCCSSBCCEEECEEEEC---
T ss_pred             HHHHHHHhCcccEECCCCccccccccccCcceeEEEecCCC
Confidence            999999999 6999733334444567788999999999873


No 59 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=2.9e-55  Score=416.65  Aligned_cols=337  Identities=16%  Similarity=0.183  Sum_probs=276.1

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceeccC-----h--h-----hhHhhhccccccc
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTWW-----P--S-----SVGKLFKTCLLMK  127 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~~-----~--~-----~~~~~~g~~l~~~  127 (437)
                      ++|+.++.+++++ || |+++.. ++.++++|++++.++++++++.. |++..     .  .     ......+.+++..
T Consensus        38 ~~p~~~~~~lr~~-gp-v~~~~~~~~~~~~vvt~~~~v~~vl~d~~~-fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  114 (426)
T 3rwl_A           38 DSVGEYFKRLRKD-DP-VHYCADSAFGPYWSITKYNDIMHVDTNHDI-FSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM  114 (426)
T ss_dssp             TCHHHHHHHHHHH-CS-EEEESCCTTCSEEEECSHHHHHHHHHCTTT-EECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred             CCccHHHHHHHhc-CC-eeeccCCCCCCEEEEcCHHHHHHHHcCCcc-cccccccCCCCcccccccccccccccCccccc
Confidence            5799999999876 99 999987 45679999999999999988753 44322     0  0     1111223367888


Q ss_pred             cChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCc-----------
Q 013728          128 AGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPV-----------  176 (437)
Q Consensus       128 ~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~-----------  176 (437)
                      ||+.|+++|+++ .+.|++..++.+.+.+.+.++++++....                    .+++.+.           
T Consensus       115 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~  193 (426)
T 3rwl_A          115 DRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLATLFDFPFEERRKLTRWSD  193 (426)
T ss_dssp             CTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSCSSSCEEHHHHTHHHHHHHHHHHHHTCCGGGTHHHHHHHH
T ss_pred             CchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            999999999999 89999999999999999999999984321                    1111110           


Q ss_pred             -------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhh
Q 013728          177 -------NFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDT  249 (437)
Q Consensus       177 -------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~t  249 (437)
                             ........+..++...+.+++.+++++ ++. .+...|+++.|++..++++  ++++++.+++..+++||+||
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~-~~~~~dll~~ll~~~~~~~--ls~~el~~~~~~l~~AG~eT  269 (426)
T 3rwl_A          194 VTTAAPGGGVVESWDQRKTELLECAAYFQVLWNE-RVN-KDPGNDLISMLAHSPATRN--MTPEEYLGNVLLLIVGGNDT  269 (426)
T ss_dssp             HHTCCTTSSSCSSHHHHHHHHHHHHHHHHHHHHH-HHT-SCCCSSHHHHHHHCGGGGG--CCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhccCccccccHHHHHHHHHHHHHHHHHHHHH-Hhh-cCCCCCHHHHHHhcccCCC--CCHHHHHHHHHHHHHHHHHH
Confidence                   011112344556677888888888877 532 1127799999998754443  89999999999999999999


Q ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCe
Q 013728          250 SSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGY  329 (437)
Q Consensus       250 t~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~  329 (437)
                      |+++++|++++|++||++|+++++|+                     +|++++|+|+||++|+++.++|.+.+|++++||
T Consensus       270 Ta~~l~~~l~~L~~~P~~~~~lr~E~---------------------~~l~a~i~E~LRl~p~~~~~~R~~~~d~~l~G~  328 (426)
T 3rwl_A          270 TRNSMTGGVLALHKNPDQFAKLKANP---------------------ALVETMVPEIIRWQTPLAHMRRTAIADSELGGK  328 (426)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSBCCEEEEESSCEEETTE
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHhCh---------------------HhHHHHHHHHHHhcCccccCceecCCCeEECCE
Confidence            99999999999999999999999884                     588999999999999999989999999999999


Q ss_pred             eeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEee
Q 013728          330 TIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLL  408 (437)
Q Consensus       330 ~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~  408 (437)
                      .||||+.|+++.+++||||++|+||++|+|+||.     +..++|||+|+|.|+|+++|.+|++++++.|+++| ++++.
T Consensus       329 ~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~-----~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~  403 (426)
T 3rwl_A          329 TIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPR-----PRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVM  403 (426)
T ss_dssp             EECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC-----TTCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred             EECCCCEEEechHHhCCCccccCCcCccCCCCCC-----CCCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeC
Confidence            9999999999999999999999999999999995     35689999999999999999999999999999999 99987


Q ss_pred             CCCCCcccccccCCCCCccEEEee
Q 013728          409 IPDEKFGYDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~v~~~~  432 (437)
                      ++ .....+....+...++|+++|
T Consensus       404 ~~-~~~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          404 AE-PERVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             SC-CEECCCSSBCCEEECEEEEEC
T ss_pred             CC-CcccccccccCcceeeEEEeC
Confidence            43 344445567778889999875


No 60 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=4.3e-56  Score=420.88  Aligned_cols=340  Identities=23%  Similarity=0.309  Sum_probs=276.2

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceecc--Chhh----hH---hh----h-ccccc
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTW--WPSS----VG---KL----F-KTCLL  125 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~--~~~~----~~---~~----~-g~~l~  125 (437)
                      .+++.++.+| ++||| ||++++ ++.++++++|++.+++++.+++. .+..  +...    +.   .+    . +.+++
T Consensus        17 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   93 (411)
T 1gwi_A           17 TDLDGESARL-RAAGP-LAAVELPGGVPVWAVTHHAEAKALLTDPRL-VKDINVWGAWRRGEIPADWPLIGLANPGRSML   93 (411)
T ss_dssp             SCHHHHHHHH-HHTCS-EEEEEETTTEEEEEECSHHHHHHHHTCTTE-ECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGG
T ss_pred             CChHHHHHHH-HHhCC-eeeeecCCCccEEEEeCHHHHHHHHcCCcc-ccCcccccccccccCCcccchhhhhccccccc
Confidence            5799999999 99999 999998 78899999999999999987652 2211  1110    00   01    2 44778


Q ss_pred             cccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhh-c--------------------cccccCccC------
Q 013728          126 MKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYW-E--------------------GVMSFPVNF------  178 (437)
Q Consensus       126 ~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~------  178 (437)
                      ..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++... .                    .+++.+...      
T Consensus        94 ~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~  172 (411)
T 1gwi_A           94 TVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARLPRLKV  172 (411)
T ss_dssp             GCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHH
T ss_pred             cCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHHHhCCCHHHHHHHHH
Confidence            88999999999999 8999999999999999999999988543 1                    000111000      


Q ss_pred             -------CChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHH
Q 013728          179 -------PGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSS  251 (437)
Q Consensus       179 -------p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~  251 (437)
                             .....++..++...+.+++.+++++ +++.  ...|+++.|++..+ ++..++++++.+++..+++||+|||+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~-~~~~l~~~~i~~~~~~~~~AG~dTt~  248 (411)
T 1gwi_A          173 LFEKFFSTQTPPEEVVATLTELASIMTDTVAA-KRAA--PGDDLTSALIQASE-NGDHLTDAEIVSTLQLMVAAGHETTI  248 (411)
T ss_dssp             HHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhccCCChHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHhhHHH
Confidence                   0001123445566677778888877 6542  25789999997643 34459999999999999999999999


Q ss_pred             HHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCee
Q 013728          252 SAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYT  330 (437)
Q Consensus       252 ~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~  330 (437)
                      ++++|++++|++||++|+|+++|+                     +|++|||+|+||++|+++ .++|.+.+|++++||.
T Consensus       249 ~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~  307 (411)
T 1gwi_A          249 SLIVNAVVNLSTHPEQRALVLSGE---------------------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRV  307 (411)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHTTS---------------------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEE
T ss_pred             HHHHHHHHHHHhChHHHHHHHcCh---------------------HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEE
Confidence            999999999999999999999863                     368999999999999998 5889999999999999


Q ss_pred             eCCCCEEeeccccccCCCCCC-CCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEee
Q 013728          331 IPKGWKLHWSTGSTHKDETLF-PNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLL  408 (437)
Q Consensus       331 ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~  408 (437)
                      ||||+.|.++.+++||||++| +||++|+||||.     ...++|||+|+|.|+|+++|++|++++++.|+++| ++++.
T Consensus       308 Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~-----~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  382 (411)
T 1gwi_A          308 IPAGDALIVSYGALGRDERAHGPTADRFDLTRTS-----GNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLA  382 (411)
T ss_dssp             ECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCC-----SSCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred             ECCCCEEEecHHHhcCChhhcCCChhhcCCCCCC-----CCCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeC
Confidence            999999999999999999999 999999999995     35689999999999999999999999999999999 89997


Q ss_pred             CCCCCccc--ccccCCCCCccEEEeecc
Q 013728          409 IPDEKFGY--DPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       409 ~~~~~~~~--~~~~~~~~~~~v~~~~r~  434 (437)
                      ++..++.+  +.+..+..+++|++++|+
T Consensus       383 ~~~~~~~~~~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          383 VPAAELRNKPVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             SCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred             CCcccccccccccccCcceeEEEecCCC
Confidence            54334433  446788999999999985


No 61 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=9.3e-56  Score=418.38  Aligned_cols=333  Identities=20%  Similarity=0.235  Sum_probs=273.2

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCC--CcEEEEeCcchhhhcccccccceeccChhhhHh----h--h-ccccccccChH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLG--EDMIVFCGTAGHKLLFSNENKLVRTWWPSSVGK----L--F-KTCLLMKAGDD  131 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~--~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~~~~----~--~-g~~l~~~~g~~  131 (437)
                      ++|+.++.++++ ||| |+++...|  .+++++++++.++++++++. .|.+........    .  . +.+++..+|+.
T Consensus        37 ~dp~~~~~~lr~-~gp-V~~~~~~g~~~~~~vv~~~~~v~~vl~~~~-~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  113 (415)
T 3mgx_A           37 LERHARWRELAA-EDA-MVWSDPGSSPSGFWSVFSHRACAAVLAPSA-PLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ  113 (415)
T ss_dssp             TTHHHHHHHHHH-HTC-CEEECSSSSSSCEEEECSHHHHHHHSCTTS-SEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred             CChhHHHHHHHh-cCC-EeeccCCCCcCCEEEEecHHHHHHHHhChh-hhcCCccccccccccccccccCCCccccCcHH
Confidence            589999999977 999 99997445  89999999999999997665 455432211111    1  2 44678899999


Q ss_pred             HHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCc---------------
Q 013728          132 AKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPV---------------  176 (437)
Q Consensus       132 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~---------------  176 (437)
                      |+++|+++ .+.|++..++.+.+.+.+.++++++....                    .++..+.               
T Consensus       114 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~  192 (415)
T 3mgx_A          114 HRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCEILGVPAEDEDMLIDLTNHAFG  192 (415)
T ss_dssp             HHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHTS
T ss_pred             HHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence            99999999 89999999999999999999999874322                    0001110               


Q ss_pred             -cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHH
Q 013728          177 -NFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAIT  255 (437)
Q Consensus       177 -~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~  255 (437)
                       ..+........++...+.+++.+++++ +++.  ...|+++.|++..     .++++++..++..+++||+|||+++++
T Consensus       193 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~-rr~~--~~~dll~~ll~~~-----~ls~~el~~~~~~ll~AG~eTTa~~l~  264 (415)
T 3mgx_A          193 GEDELFDGMTPRQAHTEILVYFDELITA-RRKE--PGDDLVSTLVTDD-----DLTIDDVLLNCDNVLIGGNETTRHAIT  264 (415)
T ss_dssp             CCC----CCCHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCT-----TSCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred             ccCcccchHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhCC-----CCCHHHHHHHHHHHHHhhhHHHHHHHH
Confidence             000000011235667788888888887 6652  2678999998753     399999999999999999999999999


Q ss_pred             HHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCC
Q 013728          256 LLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGW  335 (437)
Q Consensus       256 ~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~  335 (437)
                      |++++|++||++|+|+++|+                     ||+++||+|+||++|+++.++|.+.+|++++||.||||+
T Consensus       265 ~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~  323 (415)
T 3mgx_A          265 GAVHALATVPGLLTALRDGS---------------------ADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGT  323 (415)
T ss_dssp             HHHHHHHHSTTHHHHHHHTS---------------------SCHHHHHHHHHHHHCCBCEEEEEESSCEEETTEEECTTC
T ss_pred             HHHHHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHHhcCcccccceecCCCeeECCEEECCCC
Confidence            99999999999999999984                     799999999999999999889999999999999999999


Q ss_pred             EEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCc
Q 013728          336 KLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKF  414 (437)
Q Consensus       336 ~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~  414 (437)
                      .|+++.+++||||++|+||++|+|+||      ...++|||+|+|.|+|+++|.+|++++++.|+++| ++++.++ ...
T Consensus       324 ~V~~~~~a~~rDp~~~~dP~~F~P~R~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~  396 (415)
T 3mgx_A          324 PVVAWLPAANRDPAEFDDPDTFLPGRK------PNRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLERE-PAW  396 (415)
T ss_dssp             EEEEEHHHHTTCTTTSSSTTSCCTTCC------SCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSC-CEE
T ss_pred             EEEechHHhCCChhhcCCccccCCCCC------CCCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCC-ccc
Confidence            999999999999999999999999996      34689999999999999999999999999999999 8998743 333


Q ss_pred             ccccccCCCCCccEEEeec
Q 013728          415 GYDPMLSPSQGLPIRLQPH  433 (437)
Q Consensus       415 ~~~~~~~~~~~~~v~~~~r  433 (437)
                      ..+........++|++++|
T Consensus       397 ~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          397 LRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             CSCSSBCCEEECEEEEEEC
T ss_pred             ccCCcccCceeeeEEEecC
Confidence            3455667778899999987


No 62 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=5.2e-55  Score=413.50  Aligned_cols=335  Identities=20%  Similarity=0.241  Sum_probs=271.7

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceeccC--hh-----hhHhhh-----ccc-ccc
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTWW--PS-----SVGKLF-----KTC-LLM  126 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~~--~~-----~~~~~~-----g~~-l~~  126 (437)
                      .+|+.++.+|+ +||| |+++++ ++.++++++|++.+++++.++.  |.++.  +.     ....++     |.+ ++.
T Consensus        22 ~~p~~~~~~l~-~~Gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   97 (413)
T 2z36_A           22 FAPPAAYERLR-ERAP-INKVRLTSGGQAWWVSGHEEARAVLADGR--FSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG   97 (413)
T ss_dssp             TBCCHHHHHHH-HHCS-EEEEEETTSCEEEEECSHHHHHHHHHCTT--EECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred             cCchHHHHHHH-HcCC-eeEeecCCCceEEEEecHHHHHHHHcCCC--cccCccccCccccccccccccccccccccccc
Confidence            57999999997 7899 999998 7899999999999999998743  44321  11     112333     557 888


Q ss_pred             ccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhh---c-------------------cccccCcc-------
Q 013728          127 KAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYW---E-------------------GVMSFPVN-------  177 (437)
Q Consensus       127 ~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~~~~-------  177 (437)
                      .+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++...   .                   .+++.+..       
T Consensus        98 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~  176 (413)
T 2z36_A           98 MDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICELLGVPYTDHDFFQS  176 (413)
T ss_dssp             CCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHH
T ss_pred             cCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHHhCCCHHHHHHHHH
Confidence            8999999999999 8889999999999999999999987543   1                   00111100       


Q ss_pred             -----CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHH
Q 013728          178 -----FPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSS  252 (437)
Q Consensus       178 -----~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~  252 (437)
                           +.....++..++...+.+++.+.+++ +++.  ...|+++.|++..+ ++..++++++.+.+.++++||+|||++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~  252 (413)
T 2z36_A          177 RTTMMVSRTSMEDRRRAFAELRAYIDDLITR-KESE--PGDDLFSRQIARQR-QEGTLDHAGLVSLAFLLLTAGHETTAN  252 (413)
T ss_dssp             HHHHTTCSSCHHHHHHHHHHHHHHHHHHHHH-HHSS--CCSSHHHHHHHHHH-HHSCCCHHHHHHHHHHHHHHHSHHHHH
T ss_pred             HHHHHhcccCcHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhhc-CCCCCCHHHHHHHHHHHHhcchHHHHH
Confidence                 00000023445566777778888877 6542  25689999987643 334599999999999999999999999


Q ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeee
Q 013728          253 AITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTI  331 (437)
Q Consensus       253 ~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~i  331 (437)
                      +++|++++|++||++|+|+++|+                     .|++|||+|+||++|+++ .++|.+.+|++++||.|
T Consensus       253 ~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~I  311 (413)
T 2z36_A          253 MISLGVVGLLSHPEQLTVVKANP---------------------GRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSI  311 (413)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEE
T ss_pred             HHHHHHHHHHhCHHHHHHHHhCh---------------------HHHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEE
Confidence            99999999999999999999985                     368999999999999999 88999999999999999


Q ss_pred             CCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCC
Q 013728          332 PKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIP  410 (437)
Q Consensus       332 p~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  410 (437)
                      |||+.|.++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|+++|++|++++++.|+++| ++++.++
T Consensus       312 p~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~  385 (413)
T 2z36_A          312 KAGEGVIVSMLSANWDPAVFKDPAVLDVERGA------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVP  385 (413)
T ss_dssp             CTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred             CCCCEEEEChHhhcCChhhCCCccccCCCCCC------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence            99999999999999999999999999999974      4589999999999999999999999999999999 5898765


Q ss_pred             CCCc--ccccccCCCCCccEEEe
Q 013728          411 DEKF--GYDPMLSPSQGLPIRLQ  431 (437)
Q Consensus       411 ~~~~--~~~~~~~~~~~~~v~~~  431 (437)
                      ..++  ..+...+....++|++-
T Consensus       386 ~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          386 MEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             GGGSCBCTTSSSCCBSCCEEECC
T ss_pred             cccceecccccccCcceeeEEee
Confidence            3343  33456667777888764


No 63 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=5.9e-55  Score=411.43  Aligned_cols=327  Identities=21%  Similarity=0.285  Sum_probs=267.9

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhcccccccceecc-Chhh-hHh-hhccc--cccccC-----
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVRTW-WPSS-VGK-LFKTC--LLMKAG-----  129 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~~~-~~~~-~~~-~~g~~--l~~~~g-----  129 (437)
                      .+++.++.+| ++||| ||++++ ++.++++++|++.+++++.++.  +... .... +.. ..+.+  ++..+|     
T Consensus        26 ~~p~~~~~~l-~~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  101 (404)
T 2xbk_A           26 LKLSPLLRAL-QDRGP-IHRVRTPAGDEAWLVTRHAELKQLLHDER--IGRTHPDPPSAAQYVRSPFLDLLISDADAESG  101 (404)
T ss_dssp             TBCCHHHHHH-HHHCS-EEEEECTTSCEEEEECSHHHHHHHTTCTT--EESBCSSGGGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred             cCccHHHHHH-HhhCC-EeeeccCCCceEEEEcCHHHHHHHHcCCC--CCCCccccccCCcccccccccceeeCCCCCCC
Confidence            4789999999 89999 999997 7899999999999999998754  3332 2211 222 13445  778899     


Q ss_pred             -hHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCcc----------
Q 013728          130 -DDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPVN----------  177 (437)
Q Consensus       130 -~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~----------  177 (437)
                       +.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                     .+++.+..          
T Consensus       102 ~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~  180 (404)
T 2xbk_A          102 RRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCEVIGVPPQRRAELTTLLA  180 (404)
T ss_dssp             HHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHH
T ss_pred             CchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence             9999999999 88899999999999999999988874321                     00111110          


Q ss_pred             ----CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHH
Q 013728          178 ----FPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSA  253 (437)
Q Consensus       178 ----~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~  253 (437)
                          ...+  .+..++...+.+++.+.+++ +++.  ...|+++.| +    ++ .++++++.+.+..+++||+|||+++
T Consensus       181 ~~~~~~~~--p~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~l-~----~~-~ls~~ei~~~~~~l~~AG~dTta~~  249 (404)
T 2xbk_A          181 GIAKLDDR--EGAVRAQDDLFGYVAGLVEH-KRAE--PGPDIISRL-N----DG-ELTEDRVAHLAMGLLFAGLDSVASI  249 (404)
T ss_dssp             HHTBSSCH--HHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHH-H----SS-SCCHHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HHHhccCc--HHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHh-h----cC-CCCHHHHHHHHHHHHHhchHHHHHH
Confidence                0000  03345566777788888877 6552  256888888 2    23 5999999999999999999999999


Q ss_pred             HHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc--ccccccccccccCCeee
Q 013728          254 ITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI--GAFREALVDFTYSGYTI  331 (437)
Q Consensus       254 l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~--~~~R~~~~d~~i~g~~i  331 (437)
                      ++|++++|++||++|+|+++|++                     |++|||+|+||++|+++  .++|.+.+|++++||.|
T Consensus       250 l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~I  308 (404)
T 2xbk_A          250 MDNGVVLLAAHPDQRAAALADPD---------------------VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTI  308 (404)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHCHH---------------------HHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEE
T ss_pred             HHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCCccccccceeECCCeeECCEEE
Confidence            99999999999999999999863                     68999999999999999  78999999999999999


Q ss_pred             CCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCC
Q 013728          332 PKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIP  410 (437)
Q Consensus       332 p~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  410 (437)
                      |||+.|.++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|+++|++|++++++.|+++| ++++.++
T Consensus       309 p~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~  382 (404)
T 2xbk_A          309 RAGDLVLFDLGLPNFDERAFTGPEEFDAARTP------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELP  382 (404)
T ss_dssp             CTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             CCCCEEEeChHHhcCChhhCCCccccCCCCCC------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCC
Confidence            99999999999999999999999999999984      4689999999999999999999999999999999 7999765


Q ss_pred             CCCc--ccccccCCCCCccEEE
Q 013728          411 DEKF--GYDPMLSPSQGLPIRL  430 (437)
Q Consensus       411 ~~~~--~~~~~~~~~~~~~v~~  430 (437)
                      ...+  ..+.+..+..+++|++
T Consensus       383 ~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          383 VEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             GGGCCBCSSBTTCCBSCCEEEC
T ss_pred             CCcceeccCcccCCcceeeeeC
Confidence            3333  3355678888888874


No 64 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=5.2e-55  Score=416.06  Aligned_cols=335  Identities=18%  Similarity=0.238  Sum_probs=274.6

Q ss_pred             CchHHHHHHHHhhCCceEEEeeC-------CCcEEEEeCcchhhhcccccccceeccC----hhhhHhh--hcccccccc
Q 013728           62 KPERFIRERMEKYDSRVFKTCLL-------GEDMIVFCGTAGHKLLFSNENKLVRTWW----PSSVGKL--FKTCLLMKA  128 (437)
Q Consensus        62 ~~~~~~~~~~~~yG~~v~~~~~~-------~~~~v~v~~~~~i~~i~~~~~~~~~~~~----~~~~~~~--~g~~l~~~~  128 (437)
                      +++.++.+|+ +||| ||+++++       +.++++++|++.+++++.+++ .|.++.    ......+  .+.+++..+
T Consensus        45 ~p~~~~~~l~-~~Gp-v~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~l~~~d  121 (435)
T 2wm5_A           45 VRDGAFATLR-REAP-ISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPD-IFSSYPNITINDQTPELAEYFGSMIVLD  121 (435)
T ss_dssp             HHHHHHHHHH-HHCS-EEEECCCCC---CCCCCEEEECSHHHHHHHHHCTT-TEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred             ChhHHHHHHH-hcCC-eEecccccccccCCCCCeEEEcCHHHHHHHHcCcc-cccCccccccCccccchhhhccccccCC
Confidence            6899999995 7999 9999986       678999999999999998764 454432    1112222  255788889


Q ss_pred             ChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc-----------------------cccccCc---------
Q 013728          129 GDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE-----------------------GVMSFPV---------  176 (437)
Q Consensus       129 g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~---------  176 (437)
                      |+.|+++|+.+ .+.|++..++.+.+.+.+.++++++....                       .+++.+.         
T Consensus       122 g~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~  200 (435)
T 2wm5_A          122 DPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHW  200 (435)
T ss_dssp             TTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHH
T ss_pred             cHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            99999999999 88999999999999999988888764211                       0011110         


Q ss_pred             -------cCCC--hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhh
Q 013728          177 -------NFPG--TTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSH  247 (437)
Q Consensus       177 -------~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~  247 (437)
                             ..|.  ..+++..++...+.+++.+.+++ +++.  ...|+++.|++... ++..++++++..++..+++||+
T Consensus       201 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~  276 (435)
T 2wm5_A          201 TNVILGFGDPDLATDFDEFMQVSADIGAYATALAED-RRVN--HHDDLTSSLVEAEV-DGERLSSREIASFFILLVVAGN  276 (435)
T ss_dssp             HHHHHHTTCTTSCCCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHhccCCcchhhhHHHHHHHHHHHHHHHHHHHHH-HhcC--CCCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHHhh
Confidence                   0011  12245566677788888888887 6652  26789999997643 3445999999999999999999


Q ss_pred             hhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccC
Q 013728          248 DTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYS  327 (437)
Q Consensus       248 ~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~  327 (437)
                      |||+++++|++++|++||++|+|+++|++                    +|++|||+|+||++|+++.++|.+.+|++++
T Consensus       277 dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~  336 (435)
T 2wm5_A          277 ETTRNAITHGVLALSRYPEQRDRWWSDFD--------------------GLAPTAVEEIVRWASPVVYMRRTLTQDIELR  336 (435)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHSHH--------------------HHHHHHHHHHHHHHCSBCCEEEEESSCEEET
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHhChH--------------------hHHHHHHHHHHhhcCcccCcceEeCCCeeEC
Confidence            99999999999999999999999999975                    4789999999999999998899999999999


Q ss_pred             CeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCC-CCCCCccHHHHHHHHHHHHHHHHhhCc-e
Q 013728          328 GYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGG-GPRMCPGYEFERLLILVFIHNMIKRFK-W  405 (437)
Q Consensus       328 g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~-G~~~C~G~~~a~~~~~~~l~~ll~~f~-~  405 (437)
                      ||.||||+.|+++.+++||||++|+||++|+|||+      +..++|||+ |+|.|+|+++|.+|++++++.|+++|+ +
T Consensus       337 G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~------~~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~  410 (435)
T 2wm5_A          337 GTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN------PNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDV  410 (435)
T ss_dssp             TEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC------SCCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             CEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999993      356899999 999999999999999999999999997 9


Q ss_pred             EeeCCCCCcccccccCCCCCccEEEe
Q 013728          406 DLLIPDEKFGYDPMLSPSQGLPIRLQ  431 (437)
Q Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~v~~~  431 (437)
                      ++.+ +..+..+....+..+++|+++
T Consensus       411 ~l~~-~~~~~~~~~~~~~~~lpv~~~  435 (435)
T 2wm5_A          411 VATE-EPARLLSQFIHGIKTLPVTWS  435 (435)
T ss_dssp             EECS-CCEECCCSSBCCEEECEEECC
T ss_pred             EECC-CccccccccccCccceeEEeC
Confidence            9975 334444566677788888763


No 65 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=3.8e-55  Score=419.13  Aligned_cols=334  Identities=18%  Similarity=0.235  Sum_probs=272.4

Q ss_pred             chHHHHHHHHhhCCceE--EEe-eCCCcEEEEeCcchhhhcccccccceeccChhhh----------Hhh------hccc
Q 013728           63 PERFIRERMEKYDSRVF--KTC-LLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSV----------GKL------FKTC  123 (437)
Q Consensus        63 ~~~~~~~~~~~yG~~v~--~~~-~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~~----------~~~------~g~~  123 (437)
                      |+.++.++ ++||| |+  ++. +++.++++|++++.++++++++. .|.++.....          ...      ++.+
T Consensus        47 p~~~~~~l-r~~gP-V~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~-~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~  123 (450)
T 3tkt_A           47 LLDRFDAL-RAEAP-VAKVVAPDDEHEPFWLVSSFDGVMKASKDNA-TFLNNPKSTVFTLRVGEMMAKAITGGSPHLVES  123 (450)
T ss_dssp             HHHHHHHH-HHHCS-EEEECCTTCSSCCEEEECSHHHHHHHHHCTT-TEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCC
T ss_pred             chHHHHHH-HhcCC-eecccccCCCCCCEEEEecHHHHHHHHhCcc-cccCCCccccccccccccccccccccccccccC
Confidence            88999999 67899 99  888 77789999999999999998774 4554321110          011      2336


Q ss_pred             cccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCc------
Q 013728          124 LLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPV------  176 (437)
Q Consensus       124 l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~------  176 (437)
                      ++..+|+.|+++|+++ .+.|++.+++.+.+.+.+.++++++....                     .++..+.      
T Consensus       124 l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~  202 (450)
T 3tkt_A          124 LVQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQILGVPPEDEPKM  202 (450)
T ss_dssp             GGGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHHTTCCGGGHHHH
T ss_pred             cccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHHcCCChhHHHHH
Confidence            7888999999999999 89999999999999999999988874321                     0000000      


Q ss_pred             --------------cCC--------ChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHH
Q 013728          177 --------------NFP--------GTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEME  234 (437)
Q Consensus       177 --------------~~p--------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~  234 (437)
                                    ..+        ....++..++...+.+++.+++++ +++.  ...|+++.|++... ++..+++++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~~-~~~~ls~~e  278 (450)
T 3tkt_A          203 LFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAE-RRRN--PTDDVATVIANAVV-DGEPMSDRD  278 (450)
T ss_dssp             HHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHTCEE-TTEECCHHH
T ss_pred             HHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHhccc-cCCCCCHHH
Confidence                          000        012244556677788888888887 6652  26689999987643 444599999


Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc
Q 013728          235 VADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI  314 (437)
Q Consensus       235 i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  314 (437)
                      +.+++..+++||+|||+++++|++++|++||++|+|+++|+                     +|+++||+|+||++|+++
T Consensus       279 i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp~~  337 (450)
T 3tkt_A          279 TAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR---------------------NLLPGIVEEAIRWTTPVQ  337 (450)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH---------------------HHHHHHHHHHHHhCCCcc
Confidence            99999999999999999999999999999999999999985                     478999999999999999


Q ss_pred             ccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHH
Q 013728          315 GAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILV  394 (437)
Q Consensus       315 ~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~  394 (437)
                      .++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+|||+      ...++|||.|+|.|+|+++|++|+++
T Consensus       338 ~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~  411 (450)
T 3tkt_A          338 HFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRP------ANRHLAFGAGSHQCLGLHLARLEMRV  411 (450)
T ss_dssp             EEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC------TTCSSTTCCSTTCCTTHHHHHHHHHH
T ss_pred             CcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCC------CCCCCCCCCcCccCccHHHHHHHHHH
Confidence            888999999999999999999999999999999999999999999993      45689999999999999999999999


Q ss_pred             HHHHHHhhCc-eEeeCCCCCcccccccCCCCCccEEEee
Q 013728          395 FIHNMIKRFK-WDLLIPDEKFGYDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       395 ~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~  432 (437)
                      +++.|+++|+ +++. ++.....+........++|++++
T Consensus       412 ~l~~ll~~f~~~~l~-~~~~~~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          412 LLDVLLDRVDSLELA-GEPKRVNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             HHHHHHHHEEEEEES-SCCEECCCSSBCCEEECEEEEEE
T ss_pred             HHHHHHHhCCCceeC-CCcccccCcccCCcccceEEEec
Confidence            9999999998 6665 44444445566777789999875


No 66 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=1.7e-54  Score=411.13  Aligned_cols=320  Identities=18%  Similarity=0.195  Sum_probs=264.6

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeC-CCcEEEEeCcchhhhcccccccceeccC----hhhhHh------hhccccccccC
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLL-GEDMIVFCGTAGHKLLFSNENKLVRTWW----PSSVGK------LFKTCLLMKAG  129 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~-~~~~v~v~~~~~i~~i~~~~~~~~~~~~----~~~~~~------~~g~~l~~~~g  129 (437)
                      .+++.++.+|+++ || ||+++++ |.++++++|++.+++++.++  .|.+..    ......      ..+.+++..+|
T Consensus        29 ~dp~~~~~~l~~~-Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  104 (417)
T 3tyw_A           29 FAAPAEYAALRTD-DP-VARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA  104 (417)
T ss_dssp             TSCCTHHHHHHHT-CT-EEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred             cCchHHHHHHHhh-CC-eeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCC
Confidence            5899999999988 99 9999997 58999999999999999876  244321    111111      23447888999


Q ss_pred             hHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCccC----------
Q 013728          130 DDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPVNF----------  178 (437)
Q Consensus       130 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~----------  178 (437)
                      +.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....                     .+++.+..-          
T Consensus       105 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~  183 (417)
T 3tyw_A          105 PEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICELLGIPRHDLEFFRDVTRI  183 (417)
T ss_dssp             HHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHHHTCCTTTTTHHHHHHHH
T ss_pred             cHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            9999999999 89999999999999999999988874322                     111111100          


Q ss_pred             ---CChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHH
Q 013728          179 ---PGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAIT  255 (437)
Q Consensus       179 ---p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~  255 (437)
                         ......+..++...+.+++.+.+++ +++.  ...|+++.+++...++ ..++++++.+++..+++||+|||+++++
T Consensus       184 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~-r~~~--~~~d~l~~ll~~~~~~-~~ls~~el~~~~~~l~~AG~eTta~~l~  259 (417)
T 3tyw_A          184 SGSRNSTAEQVSEALGGLFGLLGGLVAE-RREE--PRDDLISKLVTDHLVP-GNVTTEQLLSTLGITINAGRETTTSMIA  259 (417)
T ss_dssp             HHSSSSCTTHHHHHHHHHHHHHHHHHHH-HHSS--CCSSHHHHHHHHTTTT-TSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcccCCHHHHHHHHHHHHHHHHHHHHH-HhhC--CCCCHHHHHHHhcccC-CCCCHHHHHHHHHHHHhhhHHHHHHHHH
Confidence               0011234556677788888888887 6541  2679999999876543 3499999999999999999999999999


Q ss_pred             HHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcc-cccccccccccCCeeeCCC
Q 013728          256 LLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIG-AFREALVDFTYSGYTIPKG  334 (437)
Q Consensus       256 ~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~ip~G  334 (437)
                      |++++|++||++|+|+++|++                     ||++||+|+||++|+++. ++|.+.+|++++||.||||
T Consensus       260 ~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G  318 (417)
T 3tyw_A          260 LSTLLLLDRPELPAELRKDPD---------------------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPAD  318 (417)
T ss_dssp             HHHHHHHHCTHHHHHHHHCGG---------------------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTT
T ss_pred             HHHHHHHcCHHHHHHHHhChH---------------------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCC
Confidence            999999999999999999853                     689999999999999995 7899999999999999999


Q ss_pred             CEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCC
Q 013728          335 WKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEK  413 (437)
Q Consensus       335 ~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~  413 (437)
                      +.|+++.+++||||++|+||++|+|+||.      ..++|||.|+|.|+|+++|.+|++++++.|+++| ++++.++..+
T Consensus       319 t~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~  392 (417)
T 3tyw_A          319 DGVIALLAGANHDPEQFDDPERVDFHRTD------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGERDQ  392 (417)
T ss_dssp             CEEEECHHHHTTCTTTSSSTTSCCTTCSC------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSCTTC
T ss_pred             CEEEEehhhhcCChhhcCCccccCCCCCC------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCCCcc
Confidence            99999999999999999999999999984      4599999999999999999999999999999999 9999755444


Q ss_pred             ccc
Q 013728          414 FGY  416 (437)
Q Consensus       414 ~~~  416 (437)
                      +.+
T Consensus       393 ~~~  395 (417)
T 3tyw_A          393 VVV  395 (417)
T ss_dssp             CEE
T ss_pred             cee
Confidence            433


No 67 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=4.9e-54  Score=405.04  Aligned_cols=329  Identities=16%  Similarity=0.163  Sum_probs=259.6

Q ss_pred             CCchHHHHHHHHhhCCceEEEee-CCCcEEEEeCcchhhhccccccccee-c-c-C---hhh----hHhhhccccccccC
Q 013728           61 GKPERFIRERMEKYDSRVFKTCL-LGEDMIVFCGTAGHKLLFSNENKLVR-T-W-W---PSS----VGKLFKTCLLMKAG  129 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~-~~~~~v~v~~~~~i~~i~~~~~~~~~-~-~-~---~~~----~~~~~g~~l~~~~g  129 (437)
                      .+++.++.+| ++||| ||++++ ++.++++++|++.+++++.++.  +. + . .   ...    +....+.+++..  
T Consensus        16 ~~p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--   89 (396)
T 1n40_A           16 DRIPDAVAEL-RTREP-IRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMGNI--   89 (396)
T ss_dssp             SSCCHHHHHH-HHHCS-EEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred             cCccHHHHHH-HHhCC-eeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhhhH--
Confidence            5799999999 99999 999998 7899999999999999998764  43 2 2 1   111    112234455554  


Q ss_pred             hHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCcc-----------
Q 013728          130 DDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPVN-----------  177 (437)
Q Consensus       130 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~-----------  177 (437)
                       .|+++|+.+ .+.|++. ++.+.+.+.+.++++++....                     .+++.+..           
T Consensus        90 -~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~  166 (396)
T 1n40_A           90 -ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRSLSI  166 (396)
T ss_dssp             -HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHHHTHHH
T ss_pred             -HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHHHhCCChhhHHHHHHHHHH
Confidence             999999999 8889998 999999999998888864321                     00011100           


Q ss_pred             ---CCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHhhhhhHHH
Q 013728          178 ---FPG-TTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADS-NGKFLTEMEVADNILLLLFSSHDTSSS  252 (437)
Q Consensus       178 ---~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~-~~~~lt~~~i~~~~~~~~~ag~~tt~~  252 (437)
                         ... ...++..++...+ +++.+.++     ..+...|+++.|++..++ ++..++++++.+++.++++||+|||++
T Consensus       167 ~~~~~~~~p~~~~~~~~~~~-~~~~~~i~-----~~~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~  240 (396)
T 1n40_A          167 AFMSSADPIPAAKINWDRDI-EYMAGILE-----NPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGS  240 (396)
T ss_dssp             HTBCCSSCCHHHHHHHHHHH-HHHHHHHH-----CTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhccccCCCHHHHHHHHHHH-HHHHHHHh-----CCCCCCCHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHhhhhHHH
Confidence               000 0012233333444 44444443     111147899999987522 344599999999999999999999999


Q ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeee
Q 013728          253 AITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTI  331 (437)
Q Consensus       253 ~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~i  331 (437)
                      +++|++++|++||++|+|+++|+                     .|++|||+|+||++|+++ .++|.+.+|++++||.|
T Consensus       241 ~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~I  299 (396)
T 1n40_A          241 FLTTALISLIQRPQLRNLLHEKP---------------------ELIPAGVEELLRINLSFADGLPRLATADIQVGDVLV  299 (396)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEE
T ss_pred             HHHHHHHHHHcChHHHHHHHhCH---------------------HHHHHHHHHHHhhCCCcccccceecCCCeeECCEEE
Confidence            99999999999999999999985                     378999999999999999 88999999999999999


Q ss_pred             CCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCC
Q 013728          332 PKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIP  410 (437)
Q Consensus       332 p~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  410 (437)
                      |||+.|+++.+++||||++|+||++|+||||.+     ..++|||.|+|.|+|+++|++|++++++.|+++| ++++.++
T Consensus       300 p~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-----~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~  374 (396)
T 1n40_A          300 RKGELVLVLLEGANFDPEHFPNPGSIELDRPNP-----TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVP  374 (396)
T ss_dssp             CTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST-----TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             CCCCEEEechHHhhCChhhCCChhhCCCCCCCC-----CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCC
Confidence            999999999999999999999999999999973     4689999999999999999999999999999999 5999765


Q ss_pred             CCC--cccccccCCCCCccEEE
Q 013728          411 DEK--FGYDPMLSPSQGLPIRL  430 (437)
Q Consensus       411 ~~~--~~~~~~~~~~~~~~v~~  430 (437)
                      ..+  ...+.+.++..+++|++
T Consensus       375 ~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          375 IDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             GGGCCBCCSBSBCCBSCCEEEC
T ss_pred             ccccccccccccCCcceeeeeC
Confidence            333  33345677888888874


No 68 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=2.3e-54  Score=407.77  Aligned_cols=327  Identities=16%  Similarity=0.209  Sum_probs=257.9

Q ss_pred             HHHHHHHhhCCceEEEeeC-CC---cEEEEeCcchhhhcc-cccccceeccCh-------h---hhHh-hhccccccccC
Q 013728           66 FIRERMEKYDSRVFKTCLL-GE---DMIVFCGTAGHKLLF-SNENKLVRTWWP-------S---SVGK-LFKTCLLMKAG  129 (437)
Q Consensus        66 ~~~~~~~~yG~~v~~~~~~-~~---~~v~v~~~~~i~~i~-~~~~~~~~~~~~-------~---~~~~-~~g~~l~~~~g  129 (437)
                      .+..|+++ || |++++++ |.   ++++++|++.+++++ +++.  +..+..       .   .... ..+.+++..+|
T Consensus        18 ~~~~l~~~-Gp-v~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   93 (398)
T 1lfk_A           18 PADELLAA-GA-LTRVTIGSGADAETHWMATAHAVVRQVMGDHQQ--FSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDP   93 (398)
T ss_dssp             ECHHHHTS-CS-EEEEC------CCCEEEECSHHHHHHHHHCTTT--EEECTTCCC-------------CCTTCGGGCCT
T ss_pred             hhHHHHhc-CC-ccccccCCCCcccceEEEecHHHHHHHHhhCcc--cccccccccccccCCcccccccccccCccccCC
Confidence            34447666 99 9999875 55   899999999999999 6543  333211       1   1111 23447778899


Q ss_pred             hHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCcc-----------
Q 013728          130 DDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPVN-----------  177 (437)
Q Consensus       130 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~-----------  177 (437)
                      +.|+++|+.+ .+.|++.+++.+.+.+.+.++++++....                     .+++.+..           
T Consensus        94 ~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~  172 (398)
T 1lfk_A           94 PEHTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRDMFMKLCHG  172 (398)
T ss_dssp             THHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            9999999999 88899999999999999999998874321                     01111110           


Q ss_pred             -CC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHH
Q 013728          178 -FP-GTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAIT  255 (437)
Q Consensus       178 -~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~  255 (437)
                       +. ....++..++...+.+++.+.+++ +++.  ...|+++.|++.. +  ..++++++.+++..+++||+|||+++++
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~~-~--~~l~~~el~~~~~~l~~AG~dTt~~~l~  246 (398)
T 1lfk_A          173 HLDASLSQKRRAALGDKFSRYLLAMIAR-ERKE--PGEGMIGAVVAEY-G--DDATDEELRGFCVQVMLAGDDNISGMIG  246 (398)
T ss_dssp             TTCTTSCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHHH-G--GGSCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred             HHhcccchHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHhc-C--CCCCHHHHHHHHHHHHHHhccHHHHHHH
Confidence             00 011244556677788888888887 6652  2568999998765 2  2499999999999999999999999999


Q ss_pred             HHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCC
Q 013728          256 LLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKG  334 (437)
Q Consensus       256 ~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G  334 (437)
                      |++++|++||++|+|+++|++                     |++|||+|+||++|+++ .++|.+.+|++++||.||||
T Consensus       247 ~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G  305 (398)
T 1lfk_A          247 LGVLAMLRHPEQIDAFRGDEQ---------------------SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKG  305 (398)
T ss_dssp             HHHHHHHHSGGGGGGGSSCHH---------------------HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTT
T ss_pred             HHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCC
Confidence            999999999999999998863                     68999999999999999 78999999999999999999


Q ss_pred             CEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCC
Q 013728          335 WKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEK  413 (437)
Q Consensus       335 ~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~  413 (437)
                      +.|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|+++|++|++++++.|+++| ++++.++...
T Consensus       306 t~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~  379 (398)
T 1lfk_A          306 DSVICSLPAANRDPALAPDVDRLDVTREP------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQD  379 (398)
T ss_dssp             CEEEECHHHHTTCTTTCTTTTSCCTTSCC------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCC
T ss_pred             CEEEeChHHhCCCchhcCCccccCCCCCC------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCCCCc
Confidence            99999999999999999999999999974      4589999999999999999999999999999999 8999754433


Q ss_pred             ccc--ccccCCCCCccEEE
Q 013728          414 FGY--DPMLSPSQGLPIRL  430 (437)
Q Consensus       414 ~~~--~~~~~~~~~~~v~~  430 (437)
                      +++  +...+....++|++
T Consensus       380 ~~~~~~~~~~~~~~lpv~~  398 (398)
T 1lfk_A          380 TEFRLTTPAYGLTELMVAW  398 (398)
T ss_dssp             CEEECSSSBCEEEECEEEC
T ss_pred             cccccCcCcCCcccceeeC
Confidence            333  44555666666653


No 69 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=9.2e-54  Score=402.22  Aligned_cols=328  Identities=18%  Similarity=0.216  Sum_probs=265.8

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCC----CcEEEEeCcchhhhcccccccceeccChhh-h--HhhhccccccccChHHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLG----EDMIVFCGTAGHKLLFSNENKLVRTWWPSS-V--GKLFKTCLLMKAGDDAK  133 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~----~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~-~--~~~~g~~l~~~~g~~~~  133 (437)
                      .+|+.++.+| ++||| |+++++++    .++++++|++.+++++++.. .|..+.... .  ....+.+++..+|+.|+
T Consensus        12 ~~p~~~~~~l-r~yGp-v~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~   88 (384)
T 3oo3_A           12 LDPVPEFEEL-QKAGP-LHEYDTEPGMDGRKQWLVTGHDEVRAILADHE-RFSSMRPVDDEADRALLPGILQAYDPPDHT   88 (384)
T ss_dssp             TEECHHHHHH-HHTCS-EECCCCC------CEEEECCHHHHHHHHHCTT-TEECSCCCC-----CCCTTCGGGCCTTHHH
T ss_pred             cChhHHHHHH-HhcCC-eeecccccccCCCCEEEEcCHHHHHHHHhCch-hccCCccccccccccccccccccCCChhHH
Confidence            6899999999 59999 99999876    89999999999999996653 454332211 1  12233366778999999


Q ss_pred             HHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---------------------cccccCccC------------CC
Q 013728          134 RMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---------------------GVMSFPVNF------------PG  180 (437)
Q Consensus       134 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~------------p~  180 (437)
                      ++|+.+ .+.|++.+++.+.+.+.+.++++++....                     .+++.+..-            ..
T Consensus        89 ~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~  167 (384)
T 3oo3_A           89 RLRRTV-APAYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMIRESRES  167 (384)
T ss_dssp             HHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHC
T ss_pred             HHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcc
Confidence            999999 88999999999999999999999874321                     111111100            01


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 013728          181 TTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKY  260 (437)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~  260 (437)
                      ...++..++...+.+++.+.+++ +++.  ...|+++.+++. +  +..++++++.+++..+++||+|||+++++|++++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~i~~-~~~~--~~~d~l~~ll~~-~--~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~  241 (384)
T 3oo3_A          168 RLPRQRTLSGLGIVNYTKRLTSG-KRRD--PGDGMIGVIVRE-H--GAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLL  241 (384)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHH-H--GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHH-HHhC--CCCCHHHHHHHh-c--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            11234455667778888888877 6541  267899999986 2  2349999999999999999999999999999999


Q ss_pred             HccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeeeCCCCEEee
Q 013728          261 LGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTIPKGWKLHW  339 (437)
Q Consensus       261 l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~ip~G~~v~~  339 (437)
                      |++||++|+|+++|++.                     |++||+|+||++|+++ .++|.+.+|++++||.||||+.|.+
T Consensus       242 L~~~P~~~~~l~~E~~~---------------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~  300 (384)
T 3oo3_A          242 LVTHPDQMALLREKPEL---------------------IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTC  300 (384)
T ss_dssp             HHTSHHHHHHHHHCGGG---------------------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEE
T ss_pred             HHHCHHHHHHHHhCHHH---------------------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEE
Confidence            99999999999999764                     6899999999999998 5899999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCccc--
Q 013728          340 STGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKFGY--  416 (437)
Q Consensus       340 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~--  416 (437)
                      +.+++||     +||++|+||||      ...++|||+|+|.|+|+++|.+|++++++.|+++| |+++.+++.++++  
T Consensus       301 ~~~~~~r-----~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~  369 (384)
T 3oo3_A          301 SMLATNR-----APGDRFDITRE------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKP  369 (384)
T ss_dssp             CHHHHHC-----CTTCCCCTTCS------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEEC
T ss_pred             ehhhcCC-----CCcceeCCCCC------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCccceeec
Confidence            9999999     89999999994      46799999999999999999999999999999999 9999866544443  


Q ss_pred             -ccccCCCCCccEEE
Q 013728          417 -DPMLSPSQGLPIRL  430 (437)
Q Consensus       417 -~~~~~~~~~~~v~~  430 (437)
                       +....+...++|++
T Consensus       370 ~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          370 GRPAPFAVEELPLEW  384 (384)
T ss_dssp             SSSSCCEESCCEEEC
T ss_pred             ccccccCcceeeeeC
Confidence             45667777788764


No 70 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=1.8e-53  Score=403.51  Aligned_cols=333  Identities=18%  Similarity=0.263  Sum_probs=272.8

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh---------hhhHhhhccccccccChH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP---------SSVGKLFKTCLLMKAGDD  131 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~---------~~~~~~~g~~l~~~~g~~  131 (437)
                      .+|+.+  ++.++||| ++++.++... +++++++.++++++++. .......         ......++.+++..+|++
T Consensus        33 ~~P~~~--~~lr~~gp-v~~~~~g~~~-~vv~~~~~v~~vL~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  107 (416)
T 3p3o_A           33 NFSWDS--PEVAEARE-KSWIARTPLA-LLVLRYAEADQLARDKR-LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGAD  107 (416)
T ss_dssp             TCCTTS--HHHHHHHH-HCSEEECSSS-EEECSHHHHHHHHHCTT-EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHH
T ss_pred             cCCchH--HHHHHhCC-ccccccCCCc-eEEeCHHHHHHHHcCcc-cccCCccccccccccccchhhhhcCccccCCchH
Confidence            578888  45568999 9999987666 99999999999998875 2222111         012223455788899999


Q ss_pred             HHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCc---------------
Q 013728          132 AKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPV---------------  176 (437)
Q Consensus       132 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~---------------  176 (437)
                      |+++|+++ .+.|++..++.+.+.+.+.++++++.. .                    .+++.+.               
T Consensus       108 h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~~g~~d~~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~  185 (416)
T 3p3o_A          108 HRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL-PQGDFDFVQHFPHPLPALVMCQLLGFPLEDYDTVGRLSIETNL  185 (416)
T ss_dssp             HHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC-CSSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHTTCG
T ss_pred             HHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh-ccCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence            99999999 899999999999999999999999854 3                    0011110               


Q ss_pred             ----cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHH
Q 013728          177 ----NFPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSS  252 (437)
Q Consensus       177 ----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~  252 (437)
                          ..+.....+..++...+.+++.+.+++ +++.  ...|+++.|++...++  .++++++.+++..+++||+|||++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~-rr~~--~~~dll~~ll~~~~~~--~ls~~el~~~~~~l~~AG~eTTa~  260 (416)
T 3p3o_A          186 GLALSNDQDILVKVEQGLGRMFDYLVAAIEK-RKVE--PGDDLTSDIVRAFHDG--VLDDYELRTLVATVLVAGYETTNH  260 (416)
T ss_dssp             GGTTCSCHHHHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccccchhhHHHHHHHHHHHHHHHHHHHHH-HHhC--CCccHHHHHHHhhccC--CCCHHHHHHHHHHHHHhhccHHHH
Confidence                001122345566778888888888887 6652  3678999999876544  599999999999999999999999


Q ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCc-ccccccccccccCCeee
Q 013728          253 AITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAI-GAFREALVDFTYSGYTI  331 (437)
Q Consensus       253 ~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~i  331 (437)
                      +++|++++|++||++|+|+++|++                     |++++|+|+||++|+++ .++|.+.+|++++||.|
T Consensus       261 ~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~I  319 (416)
T 3p3o_A          261 QLALAMYDFAQHPDQWMKIKENPE---------------------LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRI  319 (416)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEE
T ss_pred             HHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhccccccCcceEeCCCeEECCEEE
Confidence            999999999999999999999853                     67999999999999994 88899999999999999


Q ss_pred             CCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCC
Q 013728          332 PKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIP  410 (437)
Q Consensus       332 p~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  410 (437)
                      |||+.|+++.+++||||++|+||++|+|+||.     ...++|||.|+|.|+|+++|++|++++++.|+++| ++++.++
T Consensus       320 p~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~-----~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  394 (416)
T 3p3o_A          320 PTGTPVFMCAHVAHRDPRVFADADRFDITVKR-----EAPSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE  394 (416)
T ss_dssp             CTTCEEEECHHHHTTCTTTCTTTTSCCTTCCC-----SSCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC
T ss_pred             CCCCEEEEChHHhcCChhccCCccccCCCCCC-----CCCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence            99999999999999999999999999999964     24589999999999999999999999999999999 5888643


Q ss_pred             CCCcccccccCCCCCccEEEee
Q 013728          411 DEKFGYDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       411 ~~~~~~~~~~~~~~~~~v~~~~  432 (437)
                       ..+..+...+....++|++.|
T Consensus       395 -~~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          395 -ITWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             -CEECCCTTCCCEEECEEEESC
T ss_pred             -CceecCCCccCcceeeEEEec
Confidence             344455566777789999865


No 71 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=4.9e-53  Score=397.74  Aligned_cols=332  Identities=18%  Similarity=0.259  Sum_probs=266.8

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh-hhhHh--hhccccccccChHHHHHHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP-SSVGK--LFKTCLLMKAGDDAKRMRR  137 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~-~~~~~--~~g~~l~~~~g~~~~~~R~  137 (437)
                      .+|+.++.+++++ || |+++..+   .+++++++.++++++++.  |..... .....  ..+.+++..||+.|+++|+
T Consensus        20 ~dp~~~~~~lr~~-~p-v~~~~~g---~~~v~~~~~v~~~l~d~~--fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~   92 (394)
T 2wiy_A           20 NNPYPWYRRLQQD-HP-VHKLEDG---TYLVSRYADVSHFAKLPI--MSVEPGWADAGPWAVASDTALGSDPPHHTVLRR   92 (394)
T ss_dssp             HCCHHHHHHHHHH-CS-EEECTTS---CEEECCHHHHHHHTTSTT--EECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHH
T ss_pred             cCccHHHHHHHhc-CC-eEEecCC---eEEEcCHHHHHHHHcCCC--ccccccccccccchhcccccccCCchHHHHHHH
Confidence            3799999988664 89 9987642   799999999999998653  432210 01111  1234678889999999999


Q ss_pred             hhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccC------------------ccCC
Q 013728          138 MMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFP------------------VNFP  179 (437)
Q Consensus       138 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~------------------~~~p  179 (437)
                      .+ .+.|++..++.+.+.+.+.++++++....                    .+++.+                  ...|
T Consensus        93 ~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~p  171 (394)
T 2wiy_A           93 QT-NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAMLMQSAEP  171 (394)
T ss_dssp             HH-HTTCSHHHHHHHTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHGGGSSSC
T ss_pred             HH-HhccCHHHHHHHHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHHhccCCc
Confidence            99 89999999999999999999999874221                    001111                  0111


Q ss_pred             C-hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 013728          180 G-TTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLL  258 (437)
Q Consensus       180 ~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l  258 (437)
                      . ....+...+...+.+.+.+.+++ ++..  ...|+++.|++..++ + .++++++.+++..+++||+|||+++++|++
T Consensus       172 ~~~~~~~~~~~~~~l~~~~~~~i~~-rr~~--~~~dll~~Ll~~~~~-~-~ls~~el~~~~~~l~~AG~eTTa~~l~~~l  246 (394)
T 2wiy_A          172 ADGDVDRAAVAFGYLSARVAEMLED-KRVN--PGDGLADSLLDAARA-G-EITESEAIATILVFYAVGHMAIGYLIASGI  246 (394)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHH-HHHS--CCSSHHHHHHHHHHT-T-SSCHHHHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHH-hhcC--CCCcHHHHHHHhhhc-C-CCCHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            1 11233444566777788888877 6542  256899999876543 3 399999999999999999999999999999


Q ss_pred             HHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEe
Q 013728          259 KYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLH  338 (437)
Q Consensus       259 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~  338 (437)
                      ++|++||++|+++++|+                     +|++++|+|+||++||++.++|.+.+|++++||.||||+.|+
T Consensus       247 ~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~  305 (394)
T 2wiy_A          247 ELFARRPEVFTAFRNDE---------------------SARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIR  305 (394)
T ss_dssp             HHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEEETTEEECTTCCEE
T ss_pred             HHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHhhCCCccCeeEEECCCEEEcCeecCCCCEEE
Confidence            99999999999999885                     467999999999999999888999999999999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCc-eEeeCCCCCcccc
Q 013728          339 WSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFK-WDLLIPDEKFGYD  417 (437)
Q Consensus       339 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~  417 (437)
                      ++.+++||||++|+||++|||+||+..    ..++|||+|+|.|+|+++|++|++++++.|+++|+ +++.+ +..+..+
T Consensus       306 ~~~~~~~rdp~~~~dP~~F~p~R~~~~----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~-~~~~~~~  380 (394)
T 2wiy_A          306 FMIGAANRDPEVFDDPDVFDHTRPPAA----SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAE-EPTVAHN  380 (394)
T ss_dssp             EEHHHHTTCTTTSSSTTSCCTTCCGGG----SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESS-CCEECCC
T ss_pred             eChHhhcCCcccCCCccccCCCCCCCC----CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECC-CCccccc
Confidence            999999999999999999999999842    46899999999999999999999999999999998 99874 4444445


Q ss_pred             cccCCCCCccEEEe
Q 013728          418 PMLSPSQGLPIRLQ  431 (437)
Q Consensus       418 ~~~~~~~~~~v~~~  431 (437)
                      ...+....++|++.
T Consensus       381 ~~~~g~~~lpv~~~  394 (394)
T 2wiy_A          381 DFARRYRKLPIVLS  394 (394)
T ss_dssp             SSBCCEEECEEEEC
T ss_pred             ccccCcceeeEEeC
Confidence            56777888888863


No 72 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=6.6e-53  Score=393.57  Aligned_cols=317  Identities=21%  Similarity=0.307  Sum_probs=252.4

Q ss_pred             chHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh--h-hhH-----h--h---hccccccccC
Q 013728           63 PERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP--S-SVG-----K--L---FKTCLLMKAG  129 (437)
Q Consensus        63 ~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~--~-~~~-----~--~---~g~~l~~~~g  129 (437)
                      |+.++.++ ++||| |+++   + +.++++|++.+++++.+++ .|.++..  . .+.     .  +   .|.+++..+|
T Consensus         1 p~~~~~~l-r~~Gp-v~~~---g-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g   73 (368)
T 1io7_A            1 MYDWFSEM-RKKDP-VYYD---G-NIWQVFSYRYTKEVLNNFS-KFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDP   73 (368)
T ss_dssp             CHHHHHHH-HHHCS-EEEC---S-SCEEECSHHHHHHHHHCTT-TEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCT
T ss_pred             CCHHHHHH-HhcCC-eEeE---C-CEEEEecHHHHHHHHcCcc-cccccccccccccccccccccccccccccccccCCC
Confidence            46778888 59999 9987   3 5899999999999998764 4554432  1 111     1  1   2256788899


Q ss_pred             hHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccCcc------------
Q 013728          130 DDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFPVN------------  177 (437)
Q Consensus       130 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~------------  177 (437)
                      +.|+++|+.+ .+.|++..++.+.+.+.+.++++++.. .                    .+++.+..            
T Consensus        74 ~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~~g~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~  151 (368)
T 1io7_A           74 PLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-DPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDLV  151 (368)
T ss_dssp             THHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-CTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHGGGC
T ss_pred             hHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-hcCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            9999999999 889999999999999999999998743 2                    00111100            


Q ss_pred             -----CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHH
Q 013728          178 -----FPGTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSS  252 (437)
Q Consensus       178 -----~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~  252 (437)
                           .|. ..++..++.+.+.+++.+.+        +...|+++.|++.      .++++++.+++..+++||+|||++
T Consensus       152 ~~~~~~p~-~~~~~~~~~~~~~~~~~~~i--------~~~~d~l~~ll~~------~l~~~ei~~~~~~l~~AG~dTt~~  216 (368)
T 1io7_A          152 AFRLGKPG-EIFELGKKYLELIGYVKDHL--------NSGTEVVSRVVNS------NLSDIEKLGYIILLLIAGNETTTN  216 (368)
T ss_dssp             TTSCCCTT-CHHHHHHHHHHHHHHHHHHT--------TSSCHHHHHHHTS------SCCHHHHHHHHHHHHHTTHHHHHH
T ss_pred             HhccCChH-HHHHHHHHHHHHHHHHHHHh--------CCCCCHHHHHHhc------cCCHHHHHHHHHHHHHhhhHHHHH
Confidence                 011 11122233333333333332        1256888888864      399999999999999999999999


Q ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeC
Q 013728          253 AITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIP  332 (437)
Q Consensus       253 ~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip  332 (437)
                      +++|++++|++|| +|+|+++| +                     |++|||+|+||++|+++.++|.+.+|++++||.||
T Consensus       217 ~l~~~l~~L~~~P-~~~~l~~E-~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip  273 (368)
T 1io7_A          217 LISNSVIDFTRFN-LWQRIREE-N---------------------LYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIE  273 (368)
T ss_dssp             HHHHHHHHHHHTT-CHHHHHHH-T---------------------CHHHHHHHHHHHSCSBCCEEEEESSCEEETTEEEC
T ss_pred             HHHHHHHHHHhCh-HHHHHHhc-c---------------------hHHHHHHHHHHhCcccccCceeeCCCeeECCEEEC
Confidence            9999999999999 99999998 2                     57899999999999999889999999999999999


Q ss_pred             CCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCc-eEeeCCC
Q 013728          333 KGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFK-WDLLIPD  411 (437)
Q Consensus       333 ~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~  411 (437)
                      ||+.|.++.+++||||++|+||++|+|||+      +..++|||+|+|.|+|+++|++|++++++.|+++|+ +++.+  
T Consensus       274 ~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~--  345 (368)
T 1io7_A          274 EGEYVRVWIASANRDEEVFHDGEKFIPDRN------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD--  345 (368)
T ss_dssp             TTCEEEECHHHHTTCTTTSTTTTSCCTTCC------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE--
T ss_pred             CCCEEEecHhhhCCChhhCCCcceeCCCCC------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC--
Confidence            999999999999999999999999999993      346899999999999999999999999999999996 99875  


Q ss_pred             CCcccccccCCCCCccEEEeecc
Q 013728          412 EKFGYDPMLSPSQGLPIRLQPHQ  434 (437)
Q Consensus       412 ~~~~~~~~~~~~~~~~v~~~~r~  434 (437)
                      ..+..+....+..+++|++++|+
T Consensus       346 ~~~~~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          346 TEKVPNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             EEECCCSSBCCEEEEEEEEEC--
T ss_pred             ceeccCCcccCCceeEEEeccCC
Confidence            33344556778889999999985


No 73 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=3.1e-53  Score=400.97  Aligned_cols=349  Identities=18%  Similarity=0.202  Sum_probs=263.4

Q ss_pred             ccccccc---chHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChhhh---
Q 013728           43 LGWPVIG---ETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSSV---  116 (437)
Q Consensus        43 ~~~p~~G---~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~~---  116 (437)
                      .++|.+|   ...++.     .||+.++++++ ++|| |+++  .+..+++|++++.++++++++. .|++......   
T Consensus        18 ~~~P~~~~dp~~~~~~-----~dP~~~~~~lR-~~gP-V~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~   87 (412)
T 4dnj_A           18 AGVPHLGIDPFALDYF-----ADPYPEQETLR-EAGP-VVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDF   87 (412)
T ss_dssp             TTSCEECCCTTSHHHH-----HSCHHHHHHHH-HHCS-SEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCT
T ss_pred             CCCCccCCCCCCHHHH-----hCcHHHHHHHH-hcCC-EEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCccccccc
Confidence            3567776   234565     48999999985 4799 9865  5668999999999999998766 3443322111   


Q ss_pred             -H--hhh-ccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc------cccccCc----------
Q 013728          117 -G--KLF-KTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE------GVMSFPV----------  176 (437)
Q Consensus       117 -~--~~~-g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~----------  176 (437)
                       .  ... +..++..||++|+++|+++ .+.|++++++.+.+.+.+.+++++++...      .+..+..          
T Consensus        88 ~~~~~~~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~D~v~~~~~~~~~~~i~~l  166 (412)
T 4dnj_A           88 KKEKPWRPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLARGGNIDAIADLAEAYPLSVFPDA  166 (412)
T ss_dssp             TTSCCSSCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTSEEETCCCCCCHHHHHHHHHH
T ss_pred             cccccccCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhccCCCceeHHHHHhhhhHhHHHHH
Confidence             1  111 2256778999999999999 89999999999999999999998875433      0000000          


Q ss_pred             -cCCChhhHHHH-----------------HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHH
Q 013728          177 -NFPGTTFYKSI-----------------RAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADN  238 (437)
Q Consensus       177 -~~p~~~~~~~~-----------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~  238 (437)
                       .++........                 .........+...+.+ ..+......+.+..++... .++..++++++.++
T Consensus       167 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~~~~~l~~~e~~~~  244 (412)
T 4dnj_A          167 MGLKQEGRENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAE-QCQRPNLAPGGFGACIHAF-SDTGEITPEEAPLL  244 (412)
T ss_dssp             HTCCSTTGGGHHHHHHHHHHHTSCSSHHHHHHHHTCHHHHHHHHH-HTSGGGSCTTSHHHHHHHT-TTTTSSCTTHHHHH
T ss_pred             cCCchhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHHH-HHHhhccccccchhhhHhh-hhccchhHHHHHHH
Confidence             01111000000                 1111111112222222 2111112344455555543 33445999999999


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCccccc
Q 013728          239 ILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFR  318 (437)
Q Consensus       239 ~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R  318 (437)
                      +..+++||+|||+++++|++++|++||++|+|+++|.                     .++.++++|++|++|+++.+.|
T Consensus       245 ~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~---------------------~~~~~~~eE~lR~~pp~~~~~R  303 (412)
T 4dnj_A          245 VRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP---------------------SLARNAFEEAVRFESPVQTFFR  303 (412)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSBCEEEE
T ss_pred             HHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc---------------------cccccccceeeeecCCcccccc
Confidence            9999999999999999999999999999999999763                     5668999999999999999999


Q ss_pred             ccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHH
Q 013728          319 EALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHN  398 (437)
Q Consensus       319 ~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~  398 (437)
                      .+.+|++++||.||||+.|.++.+++||||++|+||++|+||||      ...|+|||+|+|.|+|++||++|++++++.
T Consensus       304 ~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~------~~~~lpFG~G~r~CiG~~lA~~E~~~~l~~  377 (412)
T 4dnj_A          304 TTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRK------TSGHVGFGSGVHMCVGQLVARLEGEVVLAA  377 (412)
T ss_dssp             EESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCCSTTSCTTHHHHHHHHHHHHHH
T ss_pred             cCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCC------CCCCCCcCCCCcCChhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999996      356899999999999999999999999999


Q ss_pred             HHhhC-ceEeeCCCCCcccccccCCCCCccEEEee
Q 013728          399 MIKRF-KWDLLIPDEKFGYDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       399 ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  432 (437)
                      |+++| ++++.+ +.+...+.+.++..+++|+|+|
T Consensus       378 Ll~rf~~~~l~~-~~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          378 LARKVAAIEIAG-PLKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             HHHHEEEEEECS-CCEEEECSSBEEEEECEEEEEE
T ss_pred             HHHHCCCCeECC-CCeeecCCCccCCcceeEEEEe
Confidence            99999 899874 4455556677888899999987


No 74 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=2.2e-52  Score=389.55  Aligned_cols=318  Identities=16%  Similarity=0.235  Sum_probs=256.4

Q ss_pred             chHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccC--hh-hh-----H-hhhc----cccccccC
Q 013728           63 PERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWW--PS-SV-----G-KLFK----TCLLMKAG  129 (437)
Q Consensus        63 ~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~--~~-~~-----~-~~~g----~~l~~~~g  129 (437)
                      |+..+.++ ++||| |++++  |  .+++++++.+++++.+++ .|.+..  .. .+     . .+.|    .+++..+|
T Consensus         1 p~~~~~~l-r~~gp-v~~~~--g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg   73 (367)
T 3b4x_A            1 MYDWFKQM-RKESP-VYYDG--K--VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDP   73 (367)
T ss_dssp             CHHHHHHH-HHHCS-EEECS--S--SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCT
T ss_pred             CCHHHHHH-HHcCC-ceeeC--C--EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchhhcccccccccCCc
Confidence            45677888 57999 99987  3  899999999999998764 454432  11 22     2 3445    57888899


Q ss_pred             hHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc------------------cccccCc---------------
Q 013728          130 DDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE------------------GVMSFPV---------------  176 (437)
Q Consensus       130 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~---------------  176 (437)
                      +.|+++|+.+ .+.|++..++.  +.+.+.++++++...+                  .+++.+.               
T Consensus        74 ~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~g~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~  150 (367)
T 3b4x_A           74 PLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALR  150 (367)
T ss_dssp             THHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCCSEEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhccCCcchHHHHHHhhHHHHHHHHcCCCCcHHHHHHHHHHHHhc
Confidence            9999999999 88899998887  8888888888763211                  0111110               


Q ss_pred             cCCChh-hHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHH
Q 013728          177 NFPGTT-FYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAIT  255 (437)
Q Consensus       177 ~~p~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~  255 (437)
                      .-+.+. .++. ++.+.+.+++.+.+++ +++.  ...|+++.|++.      .++++++.+++..+++||+|||+++++
T Consensus       151 ~~~~p~~~~~~-~~~~~~~~~~~~~i~~-r~~~--~~~dll~~ll~~------~ls~~el~~~~~~l~~AG~eTt~~~l~  220 (367)
T 3b4x_A          151 LGRADEIFSIG-RKYLELISFSKKELDS-RKGK--EIVDLTGKIANS------NLSELEKEGYFILLMIAGNETTTNLIG  220 (367)
T ss_dssp             TTSTTGGGCCC-HHHHHHHHHHHHHHHH-HTTT--CCSSHHHHHHTS------SSCHHHHHHHHHHHHHTTTHHHHHHHH
T ss_pred             cCCChhhHHHH-HHHHHHHHHHHHHHHH-HhcC--CCCCHHHHHHhc------cCCHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            000000 0111 4555667777777766 5431  256899998865      399999999999999999999999999


Q ss_pred             HHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCC
Q 013728          256 LLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGW  335 (437)
Q Consensus       256 ~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~  335 (437)
                      |++++|++ |++|+|+++|++                       ++||+|+||++|+++.++|.+.+|++++||.||||+
T Consensus       221 ~~l~~L~~-P~~~~~l~~e~~-----------------------~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt  276 (367)
T 3b4x_A          221 NAIEDFTL-YNSWDYVREKGA-----------------------LKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGE  276 (367)
T ss_dssp             HHHHHHHH-TTCHHHHHHHCS-----------------------HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECTTC
T ss_pred             HHHHHHhC-HHHHHHHHhCCc-----------------------hHHHHHHHHhcCcccCeeEEeCCCeEECCEEECCCC
Confidence            99999999 999999999953                       699999999999999889999999999999999999


Q ss_pred             EEeeccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCc
Q 013728          336 KLHWSTGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKF  414 (437)
Q Consensus       336 ~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~  414 (437)
                      .|.++.+++||||++|+||++|+||||.      ..++|||+|+|.|+|+++|++|++++++.|+++| ++++.++  ++
T Consensus       277 ~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~  348 (367)
T 3b4x_A          277 LVRVWIASANRDEEVFKDPDSFIPDRTP------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK--EK  348 (367)
T ss_dssp             EEEECHHHHTTCTTTSSSTTSCCTTCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE--EE
T ss_pred             EEEEChhhhcCCcccCCCccccCCCCCC------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc--cc
Confidence            9999999999999999999999999984      4689999999999999999999999999999999 7999753  44


Q ss_pred             ccccccCCCCCccEEEee
Q 013728          415 GYDPMLSPSQGLPIRLQP  432 (437)
Q Consensus       415 ~~~~~~~~~~~~~v~~~~  432 (437)
                      ..+....+..+++|++++
T Consensus       349 ~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          349 IDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             CCCSSBCSEEEEEEEEEE
T ss_pred             cccccccCcceEEEEecC
Confidence            446677788889999865


No 75 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.5e-51  Score=380.70  Aligned_cols=314  Identities=18%  Similarity=0.261  Sum_probs=233.0

Q ss_pred             HhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccCh-hhhHhhhccccccccChHHHHHHHhhhhccCCHHHHH
Q 013728           72 EKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWP-SSVGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALM  150 (437)
Q Consensus        72 ~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~-~~~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~  150 (437)
                      ++||| |+++   |  +++++|++.+++++.+++ .|.++.. ..... .+.+++..+|+.|+++|+.+ .+.|++.+++
T Consensus         2 r~~gp-v~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~-~~~~l~~~~g~~~~~~R~~~-~~~fs~~~l~   72 (343)
T 2rfb_A            2 RLNDP-VHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYSNA-GGISFITMDNPEHKEFRDIS-APYFLPSKIN   72 (343)
T ss_dssp             -CCCC-EEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC----CCGGGGCCHHHHHHHHHHH-HHHHSHHHHG
T ss_pred             CCcCC-eeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCCCc-cccccccCCchHHHHHHHHh-hhhcCHHHHH
Confidence            58999 9986   3  999999999999998765 4543321 11122 34578888999999999999 8889999999


Q ss_pred             HHHHHHHHHHHHHHHHhh--c---cc-cccC-------ccCCChhhHHHHHHHHHHHH-------HHH--HHHHHHHHHh
Q 013728          151 KYVERIDMITQQHIATYW--E---GV-MSFP-------VNFPGTTFYKSIRAADAIRE-------ELI--KLIAKQTREA  208 (437)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~--~---~~-~~~~-------~~~p~~~~~~~~~~~~~~~~-------~~~--~~i~~~~~~~  208 (437)
                      .+.+.+.+.++++++...  +   .+ ..++       +..+...........+.+..       ...  +..++ ..+.
T Consensus        73 ~~~~~i~~~~~~l~~~l~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~  151 (343)
T 2rfb_A           73 DYKDFIEETSNDLIKNIDNKDIISEYAVRLPVNIISKILGIPDSDMPLFKLWSDYIIGNKRDENFNYVNNRMVSR-LLEI  151 (343)
T ss_dssp             GGHHHHHHHHHHHHTTCTTSCHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHTSCCSSHHHHHHHHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHHHHhccccCHHHHHhhhhhHHHHHHHcCCCHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHH-HHHH
Confidence            999999999999887321  1   00 0000       01111011111111111100       000  00000 0000


Q ss_pred             cC-C-chhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCC
Q 013728          209 LG-S-KQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGE  286 (437)
Q Consensus       209 ~~-~-~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~  286 (437)
                      .. . ..| ++.|++... ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+           
T Consensus       152 ~~~~i~~d-l~~ll~~~~-~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------  218 (343)
T 2rfb_A          152 FKSDSHGI-INVLAGSSL-KNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR-----------  218 (343)
T ss_dssp             HHSCCSSH-HHHHHTCBC-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH-----------
T ss_pred             HHHHHhcc-HHHHHhhhc-CCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc-----------
Confidence            00 1 346 788876532 34459999999999999999999999999999999999999999999985           


Q ss_pred             CCCHHHhhcChHHHHHHHHhhcCCCCC-cccccccccccccCCeeeCCCCEEeeccccccCCCCCCCCCCCCCCCCCCCC
Q 013728          287 LLKWEDIQKMKYTWNVASEVMRLSPPA-IGAFREALVDFTYSGYTIPKGWKLHWSTGSTHKDETLFPNPETFDASRFERE  365 (437)
Q Consensus       287 ~~~~~~l~~lp~l~a~i~E~lRl~p~~-~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  365 (437)
                                   +|||+|+||++|++ +.++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||+   
T Consensus       219 -------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~---  282 (343)
T 2rfb_A          219 -------------SGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR---  282 (343)
T ss_dssp             -------------HHHHHHHHHHSCSBCCBCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS---
T ss_pred             -------------HHHHHHHHhhCcccccccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC---
Confidence                         69999999999999 8889999999999999999999999999999999999999999999994   


Q ss_pred             CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhCc-eEeeCCCCCcccccccCCCCCccE
Q 013728          366 GATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRFK-WDLLIPDEKFGYDPMLSPSQGLPI  428 (437)
Q Consensus       366 ~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~v  428 (437)
                          ..++|||.|+|.|+|+++|++|++++++.|+++|+ +++.+++..+..++..+....++|
T Consensus       283 ----~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~lpv  342 (343)
T 2rfb_A          283 ----EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLDNKMVLGYDKLFL  342 (343)
T ss_dssp             ----SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTTTCEECSCTTBCCEEECCB
T ss_pred             ----CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCCccccccCcCcCCcccccc
Confidence                46899999999999999999999999999999996 999753223333444455555554


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=1.4e-49  Score=375.13  Aligned_cols=336  Identities=16%  Similarity=0.209  Sum_probs=260.6

Q ss_pred             CCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceeccChhh---hHhhhccccccccChHHHHHHH
Q 013728           61 GKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTWWPSS---VGKLFKTCLLMKAGDDAKRMRR  137 (437)
Q Consensus        61 ~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~~~~~---~~~~~g~~l~~~~g~~~~~~R~  137 (437)
                      .++|..+.+++++.+++++....+ ..+.+|++++.++++++++. .|++.....   .....+..+...|+++|+++|+
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~~~-gg~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rr  114 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTPFT-GGHWIATNGDTVKEVYSDPT-RFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRK  114 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEESST-TSEEEECSHHHHHHHHTCTT-TEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecCCC-CCEEEECCHHHHHHHHcCch-hccCCCcccccccccccccCcccCCcHHHHHHHH
Confidence            578999999877655436665443 36789999999999998765 455432211   1111122456789999999999


Q ss_pred             hhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc--------------------cccccC------------------ccCC
Q 013728          138 MMMMSFLSPNALMKYVERIDMITQQHIATYWE--------------------GVMSFP------------------VNFP  179 (437)
Q Consensus       138 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~------------------~~~p  179 (437)
                      ++ .+.|++++++.+.+.+.+.++++++....                    .+...+                  ...+
T Consensus       115 ll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~~g~~D~v~~~a~~l~~~vi~~llg~~~~d~~~~~~~~~~~~~~~~~~~  193 (417)
T 4dxy_A          115 AL-DKGLNLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFPVHVFMALADLPLEDIPVLSEYARQMTRPEGNTP  193 (417)
T ss_dssp             HH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHTTSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCCSSH
T ss_pred             Hh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeHHHHHhhhHHHHHHHHcCCCHHHHHHHHhhhhhhccccccCh
Confidence            99 88999999999999999999999885332                    111111                  1111


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 013728          180 GTTFYKSIRAADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLK  259 (437)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~  259 (437)
                      .........+...+...+.+++++ +++  ....++++.|+... .++..++++++.+++..+++||+|||+++++|+++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~li~~-rr~--~~~ddl~s~L~~~~-~~~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~  269 (417)
T 4dxy_A          194 EEMATDLEAGNNGFYAYVDPIIRA-RVG--GDGDDLITLMVNSE-INGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMI  269 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-HTT--CCCCSHHHHHHTCE-ETTEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-Hhc--CCccchhhhhcccc-ccCCccchhHHHHHHHHHHhhcccchhhHHHHHHH
Confidence            112233445666777777777776 543  12678888888653 44556999999999999999999999999999999


Q ss_pred             HHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEee
Q 013728          260 YLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHW  339 (437)
Q Consensus       260 ~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~  339 (437)
                      +|++||++++++++|...+.                     .++ |.+|++++.+.+.|.+.+|++++|+.||+|+.|.+
T Consensus       270 ~L~~~P~~~~~l~~e~~~~~---------------------~av-ee~~~~~~~~~~~R~a~~d~~l~G~~Ip~G~~V~~  327 (417)
T 4dxy_A          270 HLARHPELVAELRSDPLKLM---------------------RGA-EEMFRRFPVVSEARMVAKDQEYKGVFLKRGDMILL  327 (417)
T ss_dssp             HHHTCHHHHHHHHHCHHHHH---------------------HTH-HHHHHHSCCBEEEEEECSCEEETTEEECTTCEEEE
T ss_pred             HHHhCchhhhhhccCccccc---------------------cce-eeeeccccccccccccccceEecCccccCCCEEEE
Confidence            99999999999999865441                     233 44444455567789999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCccccc
Q 013728          340 STGSTHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKFGYDP  418 (437)
Q Consensus       340 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~  418 (437)
                      +.+++||||++|+||++|+|+|      .+..++|||+|+|.|+|++||++|++++++.|+++| ++++.+++.....+.
T Consensus       328 ~~~a~~rDp~~f~dP~~FdpeR------~~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~~~~~~~  401 (417)
T 4dxy_A          328 PTALHGLDDAANPEPWKLDFSR------RSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYHSG  401 (417)
T ss_dssp             ETHHHHTCTTTSSSTTSCCTTC------SCCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCCCEEECS
T ss_pred             eehhhcCChhhCCCccccCCCC------CCCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCCeeecCC
Confidence            9999999999999999999999      566799999999999999999999999999999999 999976655555566


Q ss_pred             ccCCCCCccEEEe
Q 013728          419 MLSPSQGLPIRLQ  431 (437)
Q Consensus       419 ~~~~~~~~~v~~~  431 (437)
                      ..+....++|+|.
T Consensus       402 ~~~g~~~LPv~~~  414 (417)
T 4dxy_A          402 IVAAVENVPLVWP  414 (417)
T ss_dssp             SBCEEECCEEECC
T ss_pred             cccCceeeeEEee
Confidence            6677778999884


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.2e-45  Score=340.95  Aligned_cols=331  Identities=15%  Similarity=0.150  Sum_probs=215.5

Q ss_pred             CCCC-CcccccccchHHHHhhccCCCchHHHHHHHHhhCCceEEEeeCCCcEEEEeCcchhhhcccccccceecc---Ch
Q 013728           38 LPPG-NLGWPVIGETLGFIRAGFEGKPERFIRERMEKYDSRVFKTCLLGEDMIVFCGTAGHKLLFSNENKLVRTW---WP  113 (437)
Q Consensus        38 ~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~v~~~~~~~~~~v~v~~~~~i~~i~~~~~~~~~~~---~~  113 (437)
                      .||| +.+||.+|+.+.+.......+++.++.+++++  | |++..   .+.+++++++.++++++++  .|...   +.
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--p-V~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~  106 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--G-VRRSR---TETWVVADHATARQVLDDP--AFTRATGRTP  106 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--C-EEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCC
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--C-ceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCccccc
Confidence            4677 33789999887765433446899999999876  8 99864   5689999999999999874  34433   11


Q ss_pred             hh-------hHhhhccccccccChHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHhhc---cccccCccCCChhh
Q 013728          114 SS-------VGKLFKTCLLMKAGDDAKRMRRMMMMSFLSPNALMKYVERIDMITQQHIATYWE---GVMSFPVNFPGTTF  183 (437)
Q Consensus       114 ~~-------~~~~~g~~l~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~  183 (437)
                      ..       +.. ++.+++..||++|        .+.|+     . .+.+.+.++++++....   ....+...++....
T Consensus       107 ~~~~~~~~~~~~-~~~~l~~~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~g~~Dl~~~~a~~l~~~vi  171 (381)
T 2yjn_B          107 EWMRAAGAPPAE-WAQPFRDVHAASW--------EGEVP-----D-VGELAESFAGLLPGAGARLDLVGDFAWQVPVQGM  171 (381)
T ss_dssp             HHHHHHTCCHHH-HTHHHHHHHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC------CCCCCCTHHHHHHH
T ss_pred             ccccccccccch-hhhhhhhCCchhh--------hhccC-----C-hHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHH
Confidence            11       122 2446777889999        34455     2 55566666666552110   00000000000000


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHc
Q 013728          184 YKSIRA-ADAIREELIKLIAKQTREALGSKQDLLSRLVVIADSNGKFLTEMEVADNILLLLFSSHDTSSSAITLLLKYLG  262 (437)
Q Consensus       184 ~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ll~~~~~~~~~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~  262 (437)
                      .+..-. .+.. .+...+... -.... ....+ ....+...+    +.+    +++..+++||+|||+++++|++++|+
T Consensus       172 ~~l~G~~~~~~-~~~~~~~~~-~~~~~-~~~~~-~~~~~~~~~----l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~  239 (381)
T 2yjn_B          172 TAVLGAAGVLR-GAAWDARVS-LDAQL-SPQQL-AVTEAAVAA----LPA----DPALRALFAGAEMTANTVVDAVLAVS  239 (381)
T ss_dssp             HTC-----CCH-HHHHHHTTH-HHHTT-SCCCH-HHHHHHHHH----CC------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCHHHH-HHHHHHHHh-ccCCC-CHHHH-HHHHHHHHH----HHH----HHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            000000 0000 111111100 00000 00000 000000000    111    67888999999999999999999999


Q ss_pred             cCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhcCCCCCcccccccccccccCCeeeCCCCEEeeccc
Q 013728          263 QMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMRLSPPAIGAFREALVDFTYSGYTIPKGWKLHWSTG  342 (437)
Q Consensus       263 ~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~  342 (437)
                      +||++++++++|++                     |++++|+|+||++|+++.+.|.+.+|++++|+.||||+.|+++.+
T Consensus       240 ~~P~~~~~l~~e~~---------------------~l~~~i~E~LR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~  298 (381)
T 2yjn_B          240 AEPGLAERIADDPA---------------------AAQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVA  298 (381)
T ss_dssp             HCHHHHHHHHHCCC-----------------------HHHHHHHHHHSCSCSEEEEEESSCEESSSCEECTTCEEEEEHH
T ss_pred             HCHHHHHHHhhCHH---------------------HHHHHhCeeeeecCCCcceeEEECCCeEECCEEECCCCEEEeCHH
Confidence            99999999998842                     789999999999999998889999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHhhC-ceEeeCCCCCcccccccC
Q 013728          343 STHKDETLFPNPETFDASRFEREGATPYSYVPFGGGPRMCPGYEFERLLILVFIHNMIKRF-KWDLLIPDEKFGYDPMLS  421 (437)
Q Consensus       343 ~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~FG~G~~~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~  421 (437)
                      ++||||++|+||++|||+||.+     ..+++||+| |.|+|+++|++|++++++.|+++| ++++.++......+++.+
T Consensus       299 ~~~rDp~~~~dp~~F~p~R~~~-----~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~~~~~~~~~~r  372 (381)
T 2yjn_B          299 AANRDPEVFAEPDRLDVDRPDA-----DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPVVRRRRSPVLR  372 (381)
T ss_dssp             HHTTCTTTSSSTTSCCSSCSCC-----CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CCEECTTCSSSC
T ss_pred             HHcCCcccCCCccccCCCCCCC-----CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCCcccccCcccC
Confidence            9999999999999999999973     569999999 999999999999999999999999 999975443344455667


Q ss_pred             CCCCccEEE
Q 013728          422 PSQGLPIRL  430 (437)
Q Consensus       422 ~~~~~~v~~  430 (437)
                      +..+++|++
T Consensus       373 ~~~~LpV~l  381 (381)
T 2yjn_B          373 GTNRCPVEL  381 (381)
T ss_dssp             CEEECCCC-
T ss_pred             CCccceeeC
Confidence            777777754


No 78 
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=52.65  E-value=15  Score=19.44  Aligned_cols=20  Identities=25%  Similarity=0.447  Sum_probs=12.3

Q ss_pred             ChhHHHHHHHHHHHHHHHHH
Q 013728            1 MEFTIFSLCIAFALLFVFFY   20 (437)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~   20 (437)
                      |+...+.++++..+.++++-
T Consensus         1 MEa~vYt~ll~~tlgiiFFA   20 (32)
T 3arc_T            1 METITYVFIFACIIALFFFA   20 (32)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHh
Confidence            67777777766665555443


No 79 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=37.35  E-value=27  Score=16.60  Aligned_cols=13  Identities=8%  Similarity=0.054  Sum_probs=10.2

Q ss_pred             HHHHHHHHHHHHh
Q 013728          266 QVFENVLREQIGI  278 (437)
Q Consensus       266 ~~~~kl~~Ei~~~  278 (437)
                      ++|+|+|.|+.+-
T Consensus         8 nlqkkirkelkqr   20 (26)
T 1m46_B            8 NLQKKIRKELKQR   20 (26)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5789999998753


No 80 
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=34.85  E-value=54  Score=17.50  Aligned_cols=7  Identities=0%  Similarity=-0.211  Sum_probs=2.9

Q ss_pred             HHHHHHh
Q 013728           20 YPLIITV   26 (437)
Q Consensus        20 ~~~~~~~   26 (437)
                      +.+|+.+
T Consensus        27 flywrgr   33 (40)
T 2l9u_A           27 FLYWRGR   33 (40)
T ss_dssp             HHHHHHH
T ss_pred             eEEEccc
Confidence            3444443


No 81 
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=27.94  E-value=91  Score=17.99  Aligned_cols=6  Identities=0%  Similarity=-0.241  Sum_probs=2.2

Q ss_pred             HHHHHH
Q 013728           20 YPLIIT   25 (437)
Q Consensus        20 ~~~~~~   25 (437)
                      ++++++
T Consensus        32 ~~~~RR   37 (44)
T 2ks1_B           32 GLFMRR   37 (44)
T ss_dssp             HHHHHT
T ss_pred             HHHhhh
Confidence            333333


No 82 
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=23.42  E-value=1.1e+02  Score=22.62  Aligned_cols=72  Identities=11%  Similarity=0.034  Sum_probs=43.4

Q ss_pred             CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHccCcHHHHHHHHHHHHhhhhcccCCCCCHHHhhcChHHHHHHHHhhc
Q 013728          229 FLTEMEVADNILLLLFSSHDTSSSAITLLLKYLGQMPQVFENVLREQIGIAESKEQGELLKWEDIQKMKYTWNVASEVMR  308 (437)
Q Consensus       229 ~lt~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  308 (437)
                      .++++.+...+-.+- ...+...++..|++.+.-...++.+-+.+++...         .....+.-+=+++.+++.+-|
T Consensus         3 sf~~~~l~~~L~~L~-~s~~sI~~~s~w~l~~~~~a~~iv~~i~~~l~~~---------~~~~KL~~LYLindIl~ns~~   72 (135)
T 4fu3_A            3 SFSESALEKKLSELS-NSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKA---------KSNRKLTFLYLANDVIQNSKR   72 (135)
T ss_dssp             CCCHHHHHHHHHHCC-SSTTHHHHHHHHHHHTGGGHHHHHHHHHHHHHHS---------CTTTHHHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------ccchhHHHHHHHHHHHHHHHh
Confidence            356666666555553 5667777888888887666565555555555432         112345555566777777765


Q ss_pred             CC
Q 013728          309 LS  310 (437)
Q Consensus       309 l~  310 (437)
                      -.
T Consensus        73 ~~   74 (135)
T 4fu3_A           73 KG   74 (135)
T ss_dssp             TC
T ss_pred             cC
Confidence            43


No 83 
>2glz_A Similar to formylmethanofuran dehydrogenase subun; structural genomics, joint center for structural genomics; HET: MSE; 1.45A {Desulfitobacterium hafniense} SCOP: d.81.3.1
Probab=21.36  E-value=55  Score=25.03  Aligned_cols=21  Identities=14%  Similarity=0.286  Sum_probs=19.5

Q ss_pred             CCCCccHHHHHHHHHHHHHHH
Q 013728          379 PRMCPGYEFERLLILVFIHNM  399 (437)
Q Consensus       379 ~~~C~G~~~a~~~~~~~l~~l  399 (437)
                      -|.|||..++......++..|
T Consensus        17 GH~CPglaiG~rm~~~Al~~L   37 (153)
T 2glz_A           17 GHTCPDIALGYRIAQLAQREM   37 (153)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHc
Confidence            389999999999999999999


Done!