Query 013731
Match_columns 437
No_of_seqs 312 out of 1144
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 16:04:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013731.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013731hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.6 1.8E-16 6E-21 135.0 5.0 101 147-257 5-105 (111)
2 2kwj_A Zinc finger protein DPF 99.6 5.6E-16 1.9E-20 133.2 2.8 59 196-256 50-108 (114)
3 3asl_A E3 ubiquitin-protein li 99.5 3.3E-15 1.1E-19 118.9 4.1 57 197-256 12-69 (70)
4 2e6s_A E3 ubiquitin-protein li 99.5 5.1E-15 1.8E-19 120.0 5.0 56 197-255 20-76 (77)
5 1f62_A Transcription factor WS 99.5 4.2E-15 1.4E-19 110.5 3.2 49 208-256 2-50 (51)
6 3v43_A Histone acetyltransfera 99.5 1.4E-14 4.7E-19 124.1 6.8 58 196-255 53-111 (112)
7 3shb_A E3 ubiquitin-protein li 99.5 5.7E-15 2E-19 119.8 4.1 56 197-255 20-76 (77)
8 2e6r_A Jumonji/ARID domain-con 99.5 5.6E-15 1.9E-19 123.2 2.3 59 196-256 8-66 (92)
9 1mm2_A MI2-beta; PHD, zinc fin 99.4 8E-14 2.7E-18 107.9 4.9 49 206-257 9-57 (61)
10 1fp0_A KAP-1 corepressor; PHD 99.4 1.8E-13 6E-18 113.9 6.4 56 197-257 18-73 (88)
11 2lri_C Autoimmune regulator; Z 99.4 8.3E-14 2.8E-18 109.8 3.5 49 206-257 12-60 (66)
12 1xwh_A Autoimmune regulator; P 99.4 8.5E-14 2.9E-18 109.1 2.7 50 206-258 8-57 (66)
13 2yql_A PHD finger protein 21A; 99.4 1.2E-13 4.1E-18 104.9 2.9 47 206-255 9-55 (56)
14 1wev_A Riken cDNA 1110020M19; 99.4 1.1E-13 3.6E-18 114.5 2.2 55 206-260 16-76 (88)
15 2l5u_A Chromodomain-helicase-D 99.4 1.5E-13 5E-18 106.4 2.3 48 206-256 11-58 (61)
16 3ask_A E3 ubiquitin-protein li 99.4 2.5E-13 8.7E-18 129.9 4.4 55 198-255 169-224 (226)
17 2puy_A PHD finger protein 21A; 99.3 2.4E-13 8.2E-18 104.5 2.6 48 206-256 5-52 (60)
18 2yt5_A Metal-response element- 99.3 2.2E-13 7.5E-18 106.0 1.1 52 206-257 6-62 (66)
19 2ku3_A Bromodomain-containing 99.2 9.5E-13 3.2E-17 105.2 0.9 50 206-257 16-67 (71)
20 2l43_A N-teminal domain from h 99.2 1.2E-12 4.1E-17 108.4 0.4 52 206-259 25-78 (88)
21 3o36_A Transcription intermedi 99.2 6.9E-12 2.4E-16 115.0 4.4 49 206-257 4-52 (184)
22 3u5n_A E3 ubiquitin-protein li 99.2 7.1E-12 2.4E-16 117.1 4.0 50 206-258 7-56 (207)
23 2ro1_A Transcription intermedi 99.2 1.4E-11 4.9E-16 114.2 4.3 49 206-257 2-50 (189)
24 2k16_A Transcription initiatio 99.1 1.9E-11 6.6E-16 97.3 2.7 52 206-257 18-69 (75)
25 2l7p_A Histone-lysine N-methyl 99.1 1.7E-11 5.8E-16 104.1 2.0 57 350-423 23-83 (100)
26 2e61_A Zinc finger CW-type PWW 98.9 3.5E-10 1.2E-14 90.2 1.4 55 347-416 10-67 (69)
27 1wen_A Inhibitor of growth fam 98.9 2.2E-09 7.7E-14 85.5 5.6 49 205-257 15-66 (71)
28 2lv9_A Histone-lysine N-methyl 98.9 1.9E-09 6.3E-14 90.6 5.0 49 207-257 29-77 (98)
29 4gne_A Histone-lysine N-methyl 98.8 1.1E-09 3.7E-14 93.9 3.3 46 206-256 15-62 (107)
30 1weu_A Inhibitor of growth fam 98.8 7.2E-09 2.5E-13 86.5 5.9 50 205-258 35-87 (91)
31 2ysm_A Myeloid/lymphoid or mix 98.8 4.2E-09 1.4E-13 89.4 4.5 51 206-256 7-57 (111)
32 2vnf_A ING 4, P29ING4, inhibit 98.7 1.6E-09 5.4E-14 83.6 1.1 47 206-256 10-59 (60)
33 3c6w_A P28ING5, inhibitor of g 98.7 2.5E-09 8.5E-14 82.4 1.2 47 206-256 9-58 (59)
34 2g6q_A Inhibitor of growth pro 98.7 4.8E-09 1.7E-13 81.6 1.3 47 206-256 11-60 (62)
35 2jmi_A Protein YNG1, ING1 homo 98.6 2.1E-08 7.3E-13 83.5 2.7 46 206-255 26-75 (90)
36 2lbm_A Transcriptional regulat 98.5 1.7E-08 5.7E-13 90.6 0.4 50 205-257 62-118 (142)
37 3o70_A PHD finger protein 13; 98.3 2.1E-07 7.3E-12 73.4 2.8 48 207-256 20-67 (68)
38 1x4i_A Inhibitor of growth pro 98.3 1.1E-07 3.9E-12 75.4 1.2 47 207-257 7-56 (70)
39 3ql9_A Transcriptional regulat 98.2 4.1E-08 1.4E-12 86.8 -4.0 51 204-257 55-112 (129)
40 1we9_A PHD finger family prote 98.2 4.7E-07 1.6E-11 69.8 2.3 53 206-258 6-60 (64)
41 2kwj_A Zinc finger protein DPF 98.1 3.9E-07 1.3E-11 78.1 0.3 50 207-256 2-61 (114)
42 1wee_A PHD finger family prote 98.1 8.3E-07 2.8E-11 70.2 1.4 51 206-257 16-67 (72)
43 3v43_A Histone acetyltransfera 98.0 4.3E-07 1.5E-11 77.5 -0.9 51 207-257 6-65 (112)
44 3o7a_A PHD finger protein 13 v 98.0 1.5E-06 5E-11 64.8 2.1 44 211-255 8-51 (52)
45 2xb1_A Pygopus homolog 2, B-ce 98.0 8.4E-07 2.9E-11 75.4 0.4 51 206-258 3-63 (105)
46 2vpb_A Hpygo1, pygopus homolog 98.0 6.4E-07 2.2E-11 70.2 -0.9 48 205-254 7-64 (65)
47 1wew_A DNA-binding family prot 97.9 2.9E-06 9.8E-11 68.2 2.4 50 206-258 16-74 (78)
48 1wem_A Death associated transc 97.9 6.3E-07 2.2E-11 71.4 -1.9 50 207-257 17-71 (76)
49 1wep_A PHF8; structural genomi 97.9 2.5E-06 8.5E-11 68.6 1.0 51 207-258 13-65 (79)
50 2rsd_A E3 SUMO-protein ligase 97.9 3.7E-06 1.3E-10 65.9 1.7 47 207-256 11-65 (68)
51 2kgg_A Histone demethylase jar 97.8 2.7E-06 9.1E-11 63.5 -0.1 47 208-254 4-52 (52)
52 2ri7_A Nucleosome-remodeling f 97.7 2.6E-06 8.8E-11 76.9 -1.6 51 206-257 8-60 (174)
53 3kqi_A GRC5, PHD finger protei 97.6 1E-05 3.5E-10 64.5 0.2 49 211-259 14-64 (75)
54 3lqh_A Histone-lysine N-methyl 97.2 7.5E-05 2.6E-09 69.3 1.4 53 207-259 3-66 (183)
55 1wil_A KIAA1045 protein; ring 97.2 5.8E-05 2E-09 62.4 0.6 50 206-256 15-76 (89)
56 2ee1_A Chromodomain helicase-D 97.2 0.0001 3.4E-09 57.8 1.8 40 346-386 2-41 (64)
57 4bbq_A Lysine-specific demethy 97.1 0.00015 5.3E-09 61.4 1.6 51 207-257 60-115 (117)
58 4gne_A Histone-lysine N-methyl 97.0 0.00041 1.4E-08 59.3 3.8 48 196-250 51-98 (107)
59 3kv5_D JMJC domain-containing 96.8 0.0001 3.5E-09 77.4 -2.1 50 207-259 38-91 (488)
60 3pur_A Lysine-specific demethy 96.6 0.00051 1.8E-08 72.8 1.7 42 218-259 55-97 (528)
61 4ap4_A E3 ubiquitin ligase RNF 96.1 0.00029 1E-08 59.0 -3.3 105 147-257 5-123 (133)
62 3kv4_A PHD finger protein 8; e 95.7 0.00052 1.8E-08 71.5 -4.0 46 211-258 9-58 (447)
63 1x4j_A Ring finger protein 38; 95.0 0.011 3.7E-07 45.5 2.4 49 145-195 19-72 (75)
64 2ep4_A Ring finger protein 24; 94.2 0.036 1.2E-06 42.3 3.7 49 144-194 10-63 (74)
65 2kiz_A E3 ubiquitin-protein li 93.9 0.047 1.6E-06 41.1 3.7 48 145-194 10-62 (69)
66 2ect_A Ring finger protein 126 93.8 0.04 1.4E-06 42.4 3.2 48 145-194 11-63 (78)
67 1iym_A EL5; ring-H2 finger, ub 93.7 0.051 1.7E-06 39.0 3.4 44 146-191 2-51 (55)
68 1v87_A Deltex protein 2; ring- 93.7 0.025 8.5E-07 46.7 1.9 51 148-198 24-97 (114)
69 2ysl_A Tripartite motif-contai 93.5 0.088 3E-06 39.8 4.6 52 141-192 12-66 (73)
70 2ea6_A Ring finger protein 4; 93.3 0.027 9.2E-07 41.9 1.5 46 145-192 11-65 (69)
71 2ku7_A MLL1 PHD3-CYP33 RRM chi 93.1 0.017 5.9E-07 48.3 0.0 38 220-257 1-45 (140)
72 2djb_A Polycomb group ring fin 92.3 0.1 3.5E-06 39.7 3.5 48 145-194 11-61 (72)
73 2ysj_A Tripartite motif-contai 91.7 0.17 6E-06 37.3 4.0 37 142-178 13-51 (63)
74 2d8t_A Dactylidin, ring finger 91.6 0.11 3.7E-06 39.5 2.9 46 146-193 12-59 (71)
75 2yur_A Retinoblastoma-binding 91.3 0.12 4.2E-06 39.6 3.0 48 145-192 11-61 (74)
76 2l0b_A E3 ubiquitin-protein li 91.2 0.098 3.4E-06 42.0 2.4 45 146-192 37-86 (91)
77 1chc_A Equine herpes virus-1 r 90.7 0.14 4.8E-06 38.2 2.7 45 147-193 3-50 (68)
78 3rsn_A SET1/ASH2 histone methy 90.7 0.19 6.6E-06 46.4 4.1 49 211-259 9-62 (177)
79 1e4u_A Transcriptional repress 90.5 0.25 8.6E-06 39.2 4.2 49 145-194 7-61 (78)
80 2csy_A Zinc finger protein 183 90.5 0.15 5.2E-06 39.6 2.8 46 146-193 12-59 (81)
81 2epb_A Chromodomain-helicase-D 90.0 0.066 2.3E-06 41.9 0.3 36 351-386 7-46 (68)
82 2ecm_A Ring finger and CHY zin 90.0 0.17 5.7E-06 36.1 2.5 44 147-192 3-52 (55)
83 2ecj_A Tripartite motif-contai 89.8 0.3 1E-05 35.0 3.7 33 145-177 11-45 (58)
84 3ng2_A RNF4, snurf, ring finge 89.3 0.099 3.4E-06 39.2 0.9 47 145-193 6-61 (71)
85 2egp_A Tripartite motif-contai 89.2 0.27 9.1E-06 37.5 3.2 35 144-178 7-43 (79)
86 2ecw_A Tripartite motif-contai 88.4 0.48 1.6E-05 36.2 4.2 35 144-178 14-50 (85)
87 2ecn_A Ring finger protein 141 88.3 0.28 9.5E-06 36.8 2.7 47 145-193 11-58 (70)
88 3ztg_A E3 ubiquitin-protein li 88.0 0.23 7.8E-06 39.3 2.2 49 145-193 9-60 (92)
89 3dpl_R Ring-box protein 1; ubi 87.1 0.3 1E-05 41.0 2.5 42 149-192 37-98 (106)
90 2ecv_A Tripartite motif-contai 86.6 0.73 2.5E-05 35.2 4.3 49 144-192 14-68 (85)
91 2xeu_A Ring finger protein 4; 86.5 0.12 4E-06 37.8 -0.3 44 148-193 2-54 (64)
92 2ct2_A Tripartite motif protei 86.5 0.57 2E-05 36.3 3.7 48 145-192 11-65 (88)
93 2ecl_A Ring-box protein 2; RNF 86.2 0.38 1.3E-05 37.8 2.6 44 148-193 14-74 (81)
94 4bbq_A Lysine-specific demethy 85.4 0.12 4.2E-06 43.4 -0.8 35 207-255 8-42 (117)
95 2ecy_A TNF receptor-associated 85.3 0.56 1.9E-05 34.9 3.0 47 145-192 11-59 (66)
96 2pv0_B DNA (cytosine-5)-methyl 84.2 0.095 3.2E-06 53.7 -2.4 52 203-257 90-149 (386)
97 1g25_A CDK-activating kinase a 83.8 0.43 1.5E-05 35.4 1.7 45 148-193 2-53 (65)
98 4ayc_A E3 ubiquitin-protein li 83.1 0.37 1.3E-05 41.4 1.2 41 150-192 54-96 (138)
99 1bor_A Transcription factor PM 82.0 0.92 3.1E-05 33.1 2.9 43 146-193 3-47 (56)
100 3l11_A E3 ubiquitin-protein li 81.1 0.51 1.7E-05 38.9 1.3 45 147-192 13-59 (115)
101 2y43_A E3 ubiquitin-protein li 79.7 0.32 1.1E-05 39.1 -0.3 46 146-193 19-67 (99)
102 3lrq_A E3 ubiquitin-protein li 78.7 0.54 1.9E-05 38.2 0.7 47 146-193 19-68 (100)
103 4a0k_B E3 ubiquitin-protein li 78.6 0.46 1.6E-05 40.9 0.3 41 150-192 49-109 (117)
104 2h1e_A Chromo domain protein 1 77.5 0.43 1.5E-05 43.7 -0.3 86 300-386 43-154 (177)
105 2ckl_A Polycomb group ring fin 76.1 0.75 2.6E-05 37.6 0.9 46 146-193 12-60 (108)
106 1jm7_A BRCA1, breast cancer ty 75.5 1.4 4.8E-05 35.7 2.4 44 148-191 20-66 (112)
107 3fl2_A E3 ubiquitin-protein li 75.5 1.1 3.9E-05 37.4 1.8 47 147-194 50-98 (124)
108 3a1b_A DNA (cytosine-5)-methyl 74.6 0.61 2.1E-05 42.4 -0.0 52 203-257 76-135 (159)
109 1t1h_A Gspef-atpub14, armadill 73.5 1.8 6.3E-05 32.9 2.5 46 146-192 5-52 (78)
110 2ckl_B Ubiquitin ligase protei 73.0 1.1 3.9E-05 39.2 1.3 43 148-191 53-98 (165)
111 3hct_A TNF receptor-associated 72.7 1.3 4.3E-05 36.9 1.5 49 145-194 14-64 (118)
112 2b2y_A CHD-1, chromodomain-hel 72.3 0.71 2.4E-05 42.6 -0.2 36 351-386 126-162 (187)
113 4ap4_A E3 ubiquitin ligase RNF 70.8 0.85 2.9E-05 37.6 -0.0 45 147-193 70-123 (133)
114 2d8s_A Cellular modulator of i 69.3 3.6 0.00012 32.7 3.3 48 146-193 12-68 (80)
115 1z6u_A NP95-like ring finger p 69.2 1.8 6.3E-05 37.9 1.8 46 148-194 77-124 (150)
116 1jm7_B BARD1, BRCA1-associated 69.1 2.4 8.3E-05 35.1 2.4 44 146-193 19-65 (117)
117 2y1n_A E3 ubiquitin-protein li 65.1 2.3 7.9E-05 43.6 1.8 45 148-193 331-377 (389)
118 1rmd_A RAG1; V(D)J recombinati 64.0 2.6 8.8E-05 34.7 1.6 48 146-194 20-69 (116)
119 4hae_A CDY-like 2, chromodomai 63.7 1.3 4.4E-05 35.8 -0.3 41 345-386 13-53 (81)
120 2ea5_A Cell growth regulator w 63.5 7.5 0.00026 29.5 4.0 45 144-194 10-57 (68)
121 1iym_A EL5; ring-H2 finger, ub 62.4 3.9 0.00013 28.8 2.1 46 207-256 6-52 (55)
122 3knv_A TNF receptor-associated 62.1 2.3 7.8E-05 37.0 1.0 46 145-191 27-74 (141)
123 2vje_A E3 ubiquitin-protein li 61.7 2.7 9.1E-05 31.6 1.1 44 147-192 6-54 (64)
124 2ecg_A Baculoviral IAP repeat- 60.4 1.5 5.1E-05 33.7 -0.5 43 146-194 22-67 (75)
125 4ic3_A E3 ubiquitin-protein li 57.2 4.2 0.00014 31.1 1.6 42 147-194 22-66 (74)
126 2ct0_A Non-SMC element 1 homol 56.2 8.5 0.00029 30.4 3.2 48 145-192 11-61 (74)
127 2d8s_A Cellular modulator of i 55.5 3.7 0.00013 32.5 1.1 50 206-257 15-68 (80)
128 1wim_A KIAA0161 protein; ring 54.7 3.3 0.00011 32.9 0.6 29 149-177 5-38 (94)
129 2ect_A Ring finger protein 126 54.5 5 0.00017 30.3 1.7 48 206-257 15-62 (78)
130 3hcs_A TNF receptor-associated 51.1 5.3 0.00018 34.9 1.5 49 145-194 14-64 (170)
131 1x4j_A Ring finger protein 38; 50.0 1.6 5.4E-05 33.2 -1.9 48 206-257 23-70 (75)
132 1wgm_A Ubiquitin conjugation f 49.2 19 0.00066 29.2 4.4 46 146-193 19-67 (98)
133 4gut_A Lysine-specific histone 47.9 3.8 0.00013 45.0 -0.1 53 353-418 91-150 (776)
134 2kiz_A E3 ubiquitin-protein li 47.3 2.1 7.1E-05 31.8 -1.6 48 206-257 14-61 (69)
135 1vyx_A ORF K3, K3RING; zinc-bi 46.9 1.5 5.2E-05 33.0 -2.4 49 206-256 6-56 (60)
136 2ecl_A Ring-box protein 2; RNF 45.6 5.1 0.00017 31.2 0.4 30 223-256 44-73 (81)
137 2kr4_A Ubiquitin conjugation f 45.4 8.5 0.00029 30.3 1.7 44 148-193 13-58 (85)
138 2ct0_A Non-SMC element 1 homol 44.7 6.3 0.00021 31.1 0.8 46 207-256 16-61 (74)
139 2ecm_A Ring finger and CHY zin 44.2 3.9 0.00013 28.7 -0.4 47 206-256 5-52 (55)
140 2l0b_A E3 ubiquitin-protein li 43.0 3.2 0.00011 32.9 -1.2 47 206-256 40-86 (91)
141 3k1l_B Fancl; UBC, ring, RWD, 41.4 8.2 0.00028 39.4 1.2 51 206-256 308-370 (381)
142 3nw0_A Non-structural maintena 41.1 7.3 0.00025 37.0 0.7 46 206-255 180-225 (238)
143 3vk6_A E3 ubiquitin-protein li 40.5 6.2 0.00021 33.4 0.2 39 152-191 4-45 (101)
144 2kre_A Ubiquitin conjugation f 40.1 11 0.00038 30.8 1.6 45 147-193 27-73 (100)
145 2c2l_A CHIP, carboxy terminus 37.1 17 0.00058 33.4 2.6 47 146-193 205-253 (281)
146 2vje_B MDM4 protein; proto-onc 36.9 8.4 0.00029 28.7 0.4 44 148-193 6-54 (63)
147 1wil_A KIAA1045 protein; ring 36.7 58 0.002 26.9 5.3 55 148-204 14-73 (89)
148 2egp_A Tripartite motif-contai 35.4 22 0.00076 26.5 2.6 48 207-257 13-63 (79)
149 3t6p_A Baculoviral IAP repeat- 35.2 12 0.0004 37.5 1.2 43 146-194 292-337 (345)
150 2ep4_A Ring finger protein 24; 35.0 4.6 0.00016 30.3 -1.4 49 206-258 15-63 (74)
151 2rsn_A Chromo domain-containin 34.4 9.4 0.00032 30.1 0.3 33 353-386 19-51 (75)
152 3k1l_B Fancl; UBC, ring, RWD, 34.1 21 0.00072 36.5 2.8 32 146-177 305-346 (381)
153 2lq6_A Bromodomain-containing 34.0 10 0.00034 30.8 0.4 30 207-237 18-49 (87)
154 1v87_A Deltex protein 2; ring- 33.4 6.7 0.00023 31.8 -0.7 35 223-257 57-92 (114)
155 3l11_A E3 ubiquitin-protein li 33.3 16 0.00056 29.6 1.6 46 206-257 15-60 (115)
156 1weq_A PHD finger protein 7; s 31.1 54 0.0018 26.8 4.3 35 219-256 44-79 (85)
157 2yho_A E3 ubiquitin-protein li 28.1 18 0.0006 28.2 0.9 41 148-194 17-60 (79)
158 2dnt_A Chromodomain protein, Y 28.1 17 0.00058 28.6 0.8 30 355-385 13-42 (78)
159 3mwy_W Chromo domain-containin 27.3 17 0.00057 39.6 0.8 36 352-387 142-180 (800)
160 2k1p_A Zinc finger RAN-binding 27.1 23 0.0008 23.7 1.2 13 244-256 3-15 (33)
161 1fp0_A KAP-1 corepressor; PHD 24.8 70 0.0024 26.1 3.9 49 145-204 21-69 (88)
162 2f42_A STIP1 homology and U-bo 23.9 28 0.00097 31.7 1.6 45 148-193 105-151 (179)
163 1g6z_A CLR4 protein; transfera 23.3 25 0.00084 27.1 0.9 28 357-385 10-38 (70)
164 2lk0_A RNA-binding protein 5; 23.0 18 0.00062 24.1 0.1 11 245-255 3-13 (32)
165 1jm7_A BRCA1, breast cancer ty 22.3 20 0.00069 28.6 0.2 47 207-257 22-68 (112)
166 4a0k_B E3 ubiquitin-protein li 21.6 20 0.00069 30.5 0.1 28 225-256 82-109 (117)
167 3htk_C E3 SUMO-protein ligase 21.2 27 0.00094 34.0 0.9 42 147-188 179-223 (267)
168 1x3p_A Cpsrp43; chromo-2 domai 20.7 46 0.0016 24.5 1.9 23 358-381 3-26 (54)
169 1faq_A RAF-1; transferase, ser 20.6 53 0.0018 23.1 2.2 29 207-237 15-43 (52)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.62 E-value=1.8e-16 Score=134.97 Aligned_cols=101 Identities=27% Similarity=0.539 Sum_probs=78.3
Q ss_pred CCCCCCCCcccCCCCCCCcchhhhHHHhhhccccccccccccccccccccCCCcccccccccccccccCCCCCCeEEecc
Q 013731 147 SDISNSDISRLEVLDEDPSAREFCVSVLRSNGLLGAVGECSVRSVASGEVSGTGHEISVIQSCKLCGKADNTSTMLLCDY 226 (437)
Q Consensus 147 dd~eeC~ic~~~~~~ed~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~~~~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~ 226 (437)
.+...|.+|... ++.....+|..|-+. ++ ..|......+..+..|+|.+| ..|.+|++.+++..||+||.
T Consensus 5 ~~~~~C~~C~~~---g~~~~ll~C~~C~~~---~H--~~Cl~~~~~~~~~~~W~C~~C--~~C~~C~~~~~~~~ll~Cd~ 74 (111)
T 2ysm_A 5 SSGANCAVCDSP---GDLLDQFFCTTCGQH---YH--GMCLDIAVTPLKRAGWQCPEC--KVCQNCKQSGEDSKMLVCDT 74 (111)
T ss_dssp CCCSCBTTTCCC---CCTTTSEECSSSCCE---EC--TTTTTCCCCTTTSTTCCCTTT--CCCTTTCCCSCCTTEEECSS
T ss_pred CCCCCCcCCCCC---CCCcCCeECCCCCCC---cC--hHHhCCccccccccCccCCcC--CcccccCccCCCCCeeECCC
Confidence 344568888754 333344555544322 22 456666555555689999999 89999999999999999999
Q ss_pred CCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 227 CDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 227 Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
|+++||++||+|||..+|.|+|||+.|....
T Consensus 75 C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 75 CDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp SCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred CCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 9999999999999999999999999997754
No 2
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.57 E-value=5.6e-16 Score=133.24 Aligned_cols=59 Identities=34% Similarity=0.782 Sum_probs=55.4
Q ss_pred cCCCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 196 VSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 196 ~~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...|+|.+| ..|.+|++.++++.||+||.|+++||++||+|||..+|+|+|||+.|...
T Consensus 50 ~~~W~C~~C--~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 50 TYKWQCIEC--KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp HTTCCCGGG--CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCccCcccc--CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 458999999 89999999998999999999999999999999999999999999999653
No 3
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.53 E-value=3.3e-15 Score=118.91 Aligned_cols=57 Identities=33% Similarity=0.859 Sum_probs=53.2
Q ss_pred CCCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CCcCccCcCC
Q 013731 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSNL 256 (437)
Q Consensus 197 ~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g-~W~Cp~C~~~ 256 (437)
..|.|.+| .|.+|++.++++.||+||+|+++||++||+|||..+|+| +|||+.|...
T Consensus 12 ~~w~C~~C---~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 12 VNRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp TTSCCTTT---SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCeECCCC---CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 47999887 899999999899999999999999999999999999999 9999999753
No 4
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=5.1e-15 Score=119.99 Aligned_cols=56 Identities=32% Similarity=0.856 Sum_probs=52.1
Q ss_pred CCCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CCcCccCcC
Q 013731 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSN 255 (437)
Q Consensus 197 ~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g-~W~Cp~C~~ 255 (437)
..|+|.+| .|.+|++.++++.||+||.|+++||++||+|||..+|+| +|||+.|..
T Consensus 20 ~~w~C~~c---~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 20 PEKKCHSC---SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCCSSS---SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCeECCCC---CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 47888776 899999999999999999999999999999999999999 999999974
No 5
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.51 E-value=4.2e-15 Score=110.52 Aligned_cols=49 Identities=35% Similarity=0.946 Sum_probs=46.3
Q ss_pred cccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 208 SCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 208 ~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
.|.+|+++++++.||+||.|+++||++|++|||.++|.|+|||+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 5899999998999999999999999999999999999999999999753
No 6
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.51 E-value=1.4e-14 Score=124.10 Aligned_cols=58 Identities=33% Similarity=0.853 Sum_probs=53.4
Q ss_pred cCCCcccccccccccccccCC-CCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcC
Q 013731 196 VSGTGHEISVIQSCKLCGKAD-NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (437)
Q Consensus 196 ~~~w~c~~c~~~~C~vCg~~~-~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (437)
...|+|.+| ++|.+|++.+ +++.||+||.|+++||++||+|||.++|+|+|||+.|..
T Consensus 53 ~~~W~C~~C--~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 53 ALRWQCIEC--KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TSCCCCTTT--CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccccC--CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 468999999 8999999864 567999999999999999999999999999999999975
No 7
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.51 E-value=5.7e-15 Score=119.83 Aligned_cols=56 Identities=34% Similarity=0.906 Sum_probs=52.5
Q ss_pred CCCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCC-CcCccCcC
Q 013731 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDN-WLCQCCSN 255 (437)
Q Consensus 197 ~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~-W~Cp~C~~ 255 (437)
..|+|.+| .|.+|++.++++.||+||.|+++||++||+|||..+|+|+ |||+.|+.
T Consensus 20 ~~W~C~~C---~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 20 VNRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSCCTTT---SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCC---cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 57999888 7999999999999999999999999999999999999999 99999975
No 8
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=5.6e-15 Score=123.17 Aligned_cols=59 Identities=29% Similarity=0.680 Sum_probs=54.2
Q ss_pred cCCCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 196 VSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 196 ~~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
.+.|++.++ ..|.+|++.++++.||+||.|+++||++||+|||..+|.|+|||+.|...
T Consensus 8 ~s~~~~~~~--~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 8 HSSAQFIDS--YICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCC--CCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CchhhccCC--CCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 357888877 89999999998889999999999999999999999999999999999764
No 9
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.43 E-value=8e-14 Score=107.89 Aligned_cols=49 Identities=31% Similarity=0.929 Sum_probs=44.7
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|++++ .||+||.|+++||++||+|||..+|.|+|||+.|....
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 9 MEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCTTTCCCS---SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCcCCCCCCCC---CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 47899998765 89999999999999999999999999999999998654
No 10
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.42 E-value=1.8e-13 Score=113.87 Aligned_cols=56 Identities=29% Similarity=0.804 Sum_probs=48.6
Q ss_pred CCCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 197 SGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 197 ~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
..|..... ..|.+|++++ .||+||.|+++||++||.|||..+|.|+|+|+.|....
T Consensus 18 ~~~~d~n~--~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 18 FGTLDDSA--TICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CCSSSSSS--SCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred ccccCCCC--CcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 34544433 8999999886 79999999999999999999999999999999998654
No 11
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.40 E-value=8.3e-14 Score=109.83 Aligned_cols=49 Identities=31% Similarity=0.621 Sum_probs=43.8
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|++.+ .||+||.|+++||++||+|||..+|.|+|||+.|....
T Consensus 12 ~~~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 12 GARCGVCGDGT---DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TCCCTTTSCCT---TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCcCCCCCCC---eEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 36689998765 79999999999999999999999999999999997543
No 12
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.39 E-value=8.5e-14 Score=109.13 Aligned_cols=50 Identities=28% Similarity=0.864 Sum_probs=45.2
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (437)
...|.+|+.++ .||+||.|+++||++||+|||..+|.|+|||+.|...+.
T Consensus 8 ~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 8 EDECAVCRDGG---ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CCSBSSSSCCS---SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCccCCCCC---CEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 47899999775 899999999999999999999999999999999986543
No 13
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.2e-13 Score=104.91 Aligned_cols=47 Identities=32% Similarity=1.007 Sum_probs=43.5
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (437)
...|.+|++.+ .||+||.|+++||++||.|||..+|.|+|||+.|..
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCCSS---CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCccCCCCC---eEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 47899999875 899999999999999999999999999999999964
No 14
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.37 E-value=1.1e-13 Score=114.51 Aligned_cols=55 Identities=20% Similarity=0.616 Sum_probs=48.2
Q ss_pred cccccccccCCC--CCCeEEeccCCCCCCCcccCCCCCC----CCCCCCcCccCcCCCCcc
Q 013731 206 IQSCKLCGKADN--TSTMLLCDYCDEAFHPSCCNPRIKI----LPTDNWLCQCCSNLNSNV 260 (437)
Q Consensus 206 ~~~C~vCg~~~~--~~~LLlCD~Cd~ayH~~CL~PPL~~----iP~g~W~Cp~C~~~~~~v 260 (437)
..+|.+|++.+. .+.||+||.|+++||++||+|||.. +|.|+|||+.|.......
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~ 76 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRM 76 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCS
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhhh
Confidence 478999999865 3689999999999999999999995 999999999998765443
No 15
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.36 E-value=1.5e-13 Score=106.41 Aligned_cols=48 Identities=29% Similarity=0.896 Sum_probs=44.2
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...|.+|++++ .||+||.|+++||++||+|||..+|.|+|||+.|...
T Consensus 11 ~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 11 QDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCccCCCCC---cEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 47899999865 8999999999999999999999999999999999764
No 16
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.36 E-value=2.5e-13 Score=129.88 Aligned_cols=55 Identities=35% Similarity=0.921 Sum_probs=47.0
Q ss_pred CCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCC-CCcCccCcC
Q 013731 198 GTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTD-NWLCQCCSN 255 (437)
Q Consensus 198 ~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g-~W~Cp~C~~ 255 (437)
.|+|.+| .|.+|++.++++.||+||+|+++||++||+|||..+|.| +|+|+.|..
T Consensus 169 ~w~C~~c---~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 169 NRLCRVC---ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCCTTT---SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CEecCCC---CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 5888776 799999999999999999999999999999999999999 999999975
No 17
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.34 E-value=2.4e-13 Score=104.48 Aligned_cols=48 Identities=31% Similarity=0.975 Sum_probs=44.2
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...|.+|++++ .||+||.|+++||++|++|||..+|.|+|||+.|...
T Consensus 5 ~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCcCCCCCC---cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 47899999875 8999999999999999999999999999999999754
No 18
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.32 E-value=2.2e-13 Score=105.97 Aligned_cols=52 Identities=27% Similarity=0.830 Sum_probs=45.7
Q ss_pred cccccccccCC--CCCCeEEeccCCCCCCCcccCCCCCC--C-CCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKAD--NTSTMLLCDYCDEAFHPSCCNPRIKI--L-PTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~--~~~~LLlCD~Cd~ayH~~CL~PPL~~--i-P~g~W~Cp~C~~~~ 257 (437)
...|.+|+.+. +.+.||+||.|+++||++|++|||.. + |.|+|||+.|....
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 47899999873 45799999999999999999999987 4 99999999997644
No 19
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.24 E-value=9.5e-13 Score=105.15 Aligned_cols=50 Identities=30% Similarity=0.856 Sum_probs=44.5
Q ss_pred cccccccccCC--CCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKAD--NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~--~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|++++ +++.||+||.|+++||++|++|++ +|+|+|||+.|....
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 67 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCcC
Confidence 47899999886 778999999999999999999884 999999999997643
No 20
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.22 E-value=1.2e-12 Score=108.36 Aligned_cols=52 Identities=29% Similarity=0.832 Sum_probs=45.9
Q ss_pred cccccccccCC--CCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCCCc
Q 013731 206 IQSCKLCGKAD--NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNSN 259 (437)
Q Consensus 206 ~~~C~vCg~~~--~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~~~ 259 (437)
...|.+|+.++ +++.||+||.|+.+||++|++|++ +|+|+|||+.|......
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHTTS
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCccch
Confidence 47899999886 677999999999999999999985 89999999999875543
No 21
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.20 E-value=6.9e-12 Score=114.96 Aligned_cols=49 Identities=31% Similarity=0.922 Sum_probs=45.0
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
+..|.+|++++ .||+||+|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 4 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 4 EDWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 47799999876 69999999999999999999999999999999998754
No 22
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.19 E-value=7.1e-12 Score=117.12 Aligned_cols=50 Identities=26% Similarity=0.890 Sum_probs=45.7
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (437)
...|.+|++++ .||+||+|+++||++||.|||..+|.|+|+|+.|.....
T Consensus 7 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 7 EDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp CSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 47799999877 699999999999999999999999999999999987653
No 23
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.15 E-value=1.4e-11 Score=114.21 Aligned_cols=49 Identities=29% Similarity=0.884 Sum_probs=45.1
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|+.++ .||+||+|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 2 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 36799999877 79999999999999999999999999999999998764
No 24
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.11 E-value=1.9e-11 Score=97.27 Aligned_cols=52 Identities=33% Similarity=0.655 Sum_probs=47.3
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|++..+.+.||+||.|+.+||++|+++++..+|.++|||+.|....
T Consensus 18 ~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 18 IWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp EECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 4789999999887899999999999999999999999999999999997643
No 25
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=99.10 E-value=1.7e-11 Score=104.11 Aligned_cols=57 Identities=33% Similarity=0.756 Sum_probs=50.0
Q ss_pred CCcccchhhhhhcccCCCCcccCceeeecccccccccc----cCCCcceeeeeecCCCCCCCCCCcccchHHHHHHHh
Q 013731 350 DSISNWLQCQEVLTNNDTNVCVEGTKCGKWRRAPFSEV----QTDSWDCSCAILWDPLHSDCAVPQELETDQVLRQLK 423 (437)
Q Consensus 350 ~~~~nWlqc~evl~~~~~~~~~~~~icgKWRraP~~~v----q~~~w~c~c~~~wdp~h~dca~pqe~~t~~~~~~lk 423 (437)
....+|+||-. |+|||++|+..+ ..+.|.|+. .|||.|++|.+|||+.++||..+|+
T Consensus 23 ~~~~~WVQCD~---------------C~KWRrLP~~~~~~~~~pd~W~C~m--N~D~~~nsCs~PEE~~~~ei~~~l~ 83 (100)
T 2l7p_A 23 STESAWVRCDD---------------CFKWRRIPASVVGSIDESSRWICMN--NSDKRFADCSKSQEMSNEEINEELG 83 (100)
T ss_dssp SSSSEEEECTT---------------TCCEEEECHHHHTTSTTSSCCCGGG--SSCSSSCSTTSCCSSCHHHHHHHHT
T ss_pred CCCCeEEeeCC---------------CCccccCChhHccccCCCCCceeCC--CCCCCCCCCCCccCCCHHHHHHHhc
Confidence 45788999983 999999998776 479999987 5799999999999999999988775
No 26
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=98.88 E-value=3.5e-10 Score=90.16 Aligned_cols=55 Identities=33% Similarity=0.572 Sum_probs=45.8
Q ss_pred cCCCCcccchhhhhhcccCCCCcccCceeeecccccccccc---cCCCcceeeeeecCCCCCCCCCCcccchH
Q 013731 347 SKPDSISNWLQCQEVLTNNDTNVCVEGTKCGKWRRAPFSEV---QTDSWDCSCAILWDPLHSDCAVPQELETD 416 (437)
Q Consensus 347 ~~~~~~~nWlqc~evl~~~~~~~~~~~~icgKWRraP~~~v---q~~~w~c~c~~~wdp~h~dca~pqe~~t~ 416 (437)
..++...+|+||-.. .|+|||++|+..+ ..|.|.|+- .+||.|++|.+|||+.|+
T Consensus 10 ~~~~~~~~WVQCd~p-------------~C~KWR~LP~~~~~~~lpd~W~C~m--N~d~~~~~Cs~pEE~~~~ 67 (69)
T 2e61_A 10 SGFGQCLVWVQCSFP-------------NCGKWRRLCGNIDPSVLPDNWSCDQ--NTDVQYNRCDIPEETWTG 67 (69)
T ss_dssp SSCCCCCCEEECSST-------------TTCCEEECCSSCCTTTSCTTCCGGG--CSCGGGCSSSSCCCCCCC
T ss_pred CCCCCCCeEEEeCcc-------------ccCcccCCccccccccCCCcCEeCC--CCCCccCCCCCCcccCCC
Confidence 456778999999841 2999999999854 468999975 569999999999999875
No 27
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.86 E-value=2.2e-09 Score=85.54 Aligned_cols=49 Identities=33% Similarity=0.804 Sum_probs=42.0
Q ss_pred ccccccccccCCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 205 VIQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 205 ~~~~C~vCg~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...+| +|++..+ +.||.||. |+ .+||+.|++ |+.+|.+.|||+.|....
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 34778 7998765 58999999 77 699999999 899999999999997654
No 28
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.85 E-value=1.9e-09 Score=90.62 Aligned_cols=49 Identities=29% Similarity=0.718 Sum_probs=43.4
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
..| +|+...+.+.||+||.|+.+||+.|++|++..+|. .|+|+.|....
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 456 78888888899999999999999999999998885 89999997654
No 29
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.84 E-value=1.1e-09 Score=93.93 Aligned_cols=46 Identities=28% Similarity=0.709 Sum_probs=41.3
Q ss_pred cccccccccCCCCCCeEEec--cCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
..+|.+|+.++ .||+|| .|+++||++||+ |..+|+|+||||.|...
T Consensus 15 ~~~C~~C~~~G---~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 15 EDYCFQCGDGG---ELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp CSSCTTTCCCS---EEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CCCCCcCCCCC---cEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 47899999655 899999 899999999999 99999999999998753
No 30
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.77 E-value=7.2e-09 Score=86.55 Aligned_cols=50 Identities=32% Similarity=0.790 Sum_probs=42.3
Q ss_pred ccccccccccCCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCCcCccCcCCCC
Q 013731 205 VIQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (437)
Q Consensus 205 ~~~~C~vCg~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (437)
...+| +|++..+ +.||.||. |+ .+||+.|++ |..+|.+.|||+.|.....
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 44778 9998765 58999999 66 799999999 8899999999999976543
No 31
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.77 E-value=4.2e-09 Score=89.35 Aligned_cols=51 Identities=20% Similarity=0.621 Sum_probs=46.6
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
+..|.+|+..++.+.||+|+.|+++||++||+|++..++.+.|+|+.|...
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C 57 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVC 57 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCCC
T ss_pred CCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCCcc
Confidence 478999999998788999999999999999999998889999999998643
No 32
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.75 E-value=1.6e-09 Score=83.62 Aligned_cols=47 Identities=34% Similarity=0.845 Sum_probs=39.8
Q ss_pred cccccccccCCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...| +|++..+ +.||.||. |+ .+||++|++ |+.+|.|.|||+.|..+
T Consensus 10 ~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 10 PTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred CCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 3667 8998765 58999999 55 799999999 89999999999999753
No 33
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.71 E-value=2.5e-09 Score=82.37 Aligned_cols=47 Identities=32% Similarity=0.829 Sum_probs=40.4
Q ss_pred cccccccccCCCCCCeEEecc--CC-CCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDY--CD-EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~--Cd-~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...| +|++..+ +.|+.||. |+ .+||+.|++ |+.+|.|.||||.|..+
T Consensus 9 ~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 9 PTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 3667 8998764 57999999 76 699999999 89999999999999754
No 34
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.65 E-value=4.8e-09 Score=81.57 Aligned_cols=47 Identities=32% Similarity=0.725 Sum_probs=40.0
Q ss_pred cccccccccCCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd---~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...| +|++..+ +.||.||.|+ .+||+.|++ |+.+|.+.||||.|...
T Consensus 11 ~~yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 11 PTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred CcEE-ECCCCCC-CCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 3667 8998754 4799999955 999999999 78899999999999764
No 35
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.56 E-value=2.1e-08 Score=83.55 Aligned_cols=46 Identities=30% Similarity=0.743 Sum_probs=39.7
Q ss_pred cccccccccCCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCCcCcc-CcC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQC-CSN 255 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd---~ayH~~CL~PPL~~iP~g~W~Cp~-C~~ 255 (437)
..+| +|++.... .||.||.|+ .+||+.|++ |..+|.+.|||+. |..
T Consensus 26 ~~yC-iC~~~~~g-~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 26 EVYC-FCRNVSYG-PMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp SCCS-TTTCCCSS-SEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CcEE-EeCCCCCC-CEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 3667 89987654 799999977 899999999 8899999999999 974
No 36
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.49 E-value=1.7e-08 Score=90.57 Aligned_cols=50 Identities=22% Similarity=0.731 Sum_probs=44.5
Q ss_pred ccccccccccCCCCCCeEEeccCCCCCCCcccCCCCC-----C--CCCCCCcCccCcCCC
Q 013731 205 VIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIK-----I--LPTDNWLCQCCSNLN 257 (437)
Q Consensus 205 ~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~-----~--iP~g~W~Cp~C~~~~ 257 (437)
.+.+|.+|+.++ .||+||.|+++||..|+.|||. + .|.|+|+|+.|....
T Consensus 62 ~~d~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 62 MDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp CBCSCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred CCCeecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 458999999988 8999999999999999999986 2 589999999998653
No 37
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.32 E-value=2.1e-07 Score=73.45 Aligned_cols=48 Identities=29% Similarity=0.678 Sum_probs=40.9
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
..| +|++..+.+.||.||.|+..||..|++.....+| +.|+|+.|...
T Consensus 20 ~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 20 VTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp CCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred eEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 566 9999988778999999999999999997655555 68999999754
No 38
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=1.1e-07 Score=75.45 Aligned_cols=47 Identities=30% Similarity=0.747 Sum_probs=39.1
Q ss_pred ccccccccCCCCCCeEEeccCC---CCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCD---EAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd---~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
.+| +|++..+ +.||.||.|+ .+||+.|++ |...|.+.|||+.|....
T Consensus 7 ~yC-~C~~~~~-g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 7 GYC-ICNQVSY-GEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAAM 56 (70)
T ss_dssp CCS-TTSCCCC-SSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHHH
T ss_pred eEE-EcCCCCC-CCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCccc
Confidence 455 4887754 4899999986 899999999 788899999999997643
No 39
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.20 E-value=4.1e-08 Score=86.77 Aligned_cols=51 Identities=22% Similarity=0.772 Sum_probs=43.7
Q ss_pred cccccccccccCCCCCCeEEeccCCCCCCCcccCCCC-----CCC--CCCCCcCccCcCCC
Q 013731 204 SVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRI-----KIL--PTDNWLCQCCSNLN 257 (437)
Q Consensus 204 c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL-----~~i--P~g~W~Cp~C~~~~ 257 (437)
..+..|.+|+.++ .+++||.|+++||..|+.|++ .++ |.+.|+|..|....
T Consensus 55 g~~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 55 GMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp SCBSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred CCCCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 3457899999887 899999999999999999984 354 89999999997654
No 40
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.20 E-value=4.7e-07 Score=69.75 Aligned_cols=53 Identities=25% Similarity=0.577 Sum_probs=42.0
Q ss_pred cccccccccCCC-CCCeEEeccCCCCCCCcccCCCCCCCC-CCCCcCccCcCCCC
Q 013731 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILP-TDNWLCQCCSNLNS 258 (437)
Q Consensus 206 ~~~C~vCg~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP-~g~W~Cp~C~~~~~ 258 (437)
..+|.+|++..+ ...|+.||.|+..||..|++....... ...|+|+.|..+..
T Consensus 6 ~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 6 SGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 467889998864 568999999999999999995433332 36899999987654
No 41
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.11 E-value=3.9e-07 Score=78.09 Aligned_cols=50 Identities=22% Similarity=0.634 Sum_probs=40.4
Q ss_pred ccccccccCC-------CCCCeEEeccCCCCCCCcccCCCCC---CCCCCCCcCccCcCC
Q 013731 207 QSCKLCGKAD-------NTSTMLLCDYCDEAFHPSCCNPRIK---ILPTDNWLCQCCSNL 256 (437)
Q Consensus 207 ~~C~vCg~~~-------~~~~LLlCD~Cd~ayH~~CL~PPL~---~iP~g~W~Cp~C~~~ 256 (437)
.+|.+|..++ +.+.||+|+.|+++||++||++++. .+|.+.|+|+.|...
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C 61 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSC 61 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCcc
Confidence 4577776543 4569999999999999999998743 578899999999644
No 42
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.07 E-value=8.3e-07 Score=70.23 Aligned_cols=51 Identities=29% Similarity=0.598 Sum_probs=40.0
Q ss_pred cccccccccCCCC-CCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNT-STMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~-~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...| +|++..+. ..||.||.|...||+.|++..........|+|+.|....
T Consensus 16 ~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred ceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 3667 69998654 479999999999999999965433334789999997644
No 43
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.04 E-value=4.3e-07 Score=77.51 Aligned_cols=51 Identities=22% Similarity=0.593 Sum_probs=39.9
Q ss_pred ccccccccC------CCCCCeEEeccCCCCCCCcccCC--CC-CCCCCCCCcCccCcCCC
Q 013731 207 QSCKLCGKA------DNTSTMLLCDYCDEAFHPSCCNP--RI-KILPTDNWLCQCCSNLN 257 (437)
Q Consensus 207 ~~C~vCg~~------~~~~~LLlCD~Cd~ayH~~CL~P--PL-~~iP~g~W~Cp~C~~~~ 257 (437)
.+|.+|... +..+.||.|+.|+++||++||+. ++ ..++.+.|+|+.|....
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~ 65 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCS 65 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBT
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCccc
Confidence 567777654 45679999999999999999974 23 25788999999997543
No 44
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.03 E-value=1.5e-06 Score=64.83 Aligned_cols=44 Identities=30% Similarity=0.668 Sum_probs=37.5
Q ss_pred ccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcC
Q 013731 211 LCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (437)
Q Consensus 211 vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (437)
+|++..+...|+.||.|+..||..|++.....+| +.|+|+.|..
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 7998888779999999999999999996554444 6899999964
No 45
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.01 E-value=8.4e-07 Score=75.40 Aligned_cols=51 Identities=22% Similarity=0.676 Sum_probs=41.3
Q ss_pred cccccccccCC-CCCCeEEec-cCCCCCCCcccCCCCCC--------CCCCCCcCccCcCCCC
Q 013731 206 IQSCKLCGKAD-NTSTMLLCD-YCDEAFHPSCCNPRIKI--------LPTDNWLCQCCSNLNS 258 (437)
Q Consensus 206 ~~~C~vCg~~~-~~~~LLlCD-~Cd~ayH~~CL~PPL~~--------iP~g~W~Cp~C~~~~~ 258 (437)
...|.+|+++- +.+.|+.|| .|+..||..|++ |+. .|.+.|+|+.|.....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVg--lt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTG--MTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTT--CCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCC--cCHHHHHhhccCCCCCEECccccCcCC
Confidence 36788999984 345799998 999999999999 553 4778999999987653
No 46
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.98 E-value=6.4e-07 Score=70.22 Aligned_cols=48 Identities=25% Similarity=0.721 Sum_probs=39.5
Q ss_pred ccccccccccCCC-CCCeEEec-cCCCCCCCcccCCCCCC--------CCCCCCcCccCc
Q 013731 205 VIQSCKLCGKADN-TSTMLLCD-YCDEAFHPSCCNPRIKI--------LPTDNWLCQCCS 254 (437)
Q Consensus 205 ~~~~C~vCg~~~~-~~~LLlCD-~Cd~ayH~~CL~PPL~~--------iP~g~W~Cp~C~ 254 (437)
....|.+|+++.+ ...|+.|| .|+..||..|++ |+. -|.+.|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg--lt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG--MTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT--CCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccC--CCHHHHHHhhccCCCcEECcCcc
Confidence 3478999999854 56899999 999999999999 553 377899999996
No 47
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.95 E-value=2.9e-06 Score=68.25 Aligned_cols=50 Identities=24% Similarity=0.650 Sum_probs=40.7
Q ss_pred cccccccccCCCCCCeEEec--cCCCCCCCcccCCCCCCCC-------CCCCcCccCcCCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIKILP-------TDNWLCQCCSNLNS 258 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~~iP-------~g~W~Cp~C~~~~~ 258 (437)
...| +|+...+.+.|+.|| .|+..||..|++ |...+ ...|||+.|.....
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVg--i~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVI--LPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHS--CCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEc--cccccccccccCCCCEECCCCCcccC
Confidence 3667 899997778999999 999999999999 54444 25899999976543
No 48
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.92 E-value=6.3e-07 Score=71.44 Aligned_cols=50 Identities=30% Similarity=0.757 Sum_probs=39.6
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccCCCCCC---C--CCCCCcCccCcCCC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKI---L--PTDNWLCQCCSNLN 257 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~---i--P~g~W~Cp~C~~~~ 257 (437)
..| +|++..+...|+.||.|+..||..|++..... + +...|+|+.|....
T Consensus 17 ~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 17 LYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 556 89999887799999999999999999943221 1 35789999997654
No 49
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.89 E-value=2.5e-06 Score=68.61 Aligned_cols=51 Identities=27% Similarity=0.589 Sum_probs=39.6
Q ss_pred ccccccccCCC-CCCeEEeccCCCCCCCcccCCCCCCC-CCCCCcCccCcCCCC
Q 013731 207 QSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKIL-PTDNWLCQCCSNLNS 258 (437)
Q Consensus 207 ~~C~vCg~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~i-P~g~W~Cp~C~~~~~ 258 (437)
..| +|++..+ ...||.||.|+..||..|++-..... ..+.|+|+.|....+
T Consensus 13 ~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 13 VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred cEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccC
Confidence 456 8999875 67999999999999999999432222 136899999987654
No 50
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.87 E-value=3.7e-06 Score=65.93 Aligned_cols=47 Identities=23% Similarity=0.572 Sum_probs=36.6
Q ss_pred ccccccccCCCCCCeEEecc--CCCCCCCcccCCCCCCCC------CCCCcCccCcCC
Q 013731 207 QSCKLCGKADNTSTMLLCDY--CDEAFHPSCCNPRIKILP------TDNWLCQCCSNL 256 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~--Cd~ayH~~CL~PPL~~iP------~g~W~Cp~C~~~ 256 (437)
..| +|+...+.+.|+.||+ |+..||+.|++ +...| ...|||+.|+..
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvg--i~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVL--IPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTSC--CCSSTTSCCCCCSSCCCHHHHHH
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhCC--CCcccccccCCCCcEECcCccCc
Confidence 345 7999888889999995 99999999998 33222 247999999753
No 51
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.80 E-value=2.7e-06 Score=63.50 Aligned_cols=47 Identities=23% Similarity=0.651 Sum_probs=35.9
Q ss_pred cccccccCCC-CCCeEEec-cCCCCCCCcccCCCCCCCCCCCCcCccCc
Q 013731 208 SCKLCGKADN-TSTMLLCD-YCDEAFHPSCCNPRIKILPTDNWLCQCCS 254 (437)
Q Consensus 208 ~C~vCg~~~~-~~~LLlCD-~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~ 254 (437)
.|-+|+++.+ +..|+.|| .|+..||..|++-.......+.|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 5678998875 56899999 89999999999933222223789999984
No 52
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.72 E-value=2.6e-06 Score=76.93 Aligned_cols=51 Identities=20% Similarity=0.555 Sum_probs=40.2
Q ss_pred cccccccccCCC-CCCeEEeccCCCCCCCcccCCCCCC-CCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKI-LPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~-iP~g~W~Cp~C~~~~ 257 (437)
...| +|+++.+ .+.|+.||.|+.+||..|++..... ...+.|+|+.|....
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 3678 9999865 5689999999999999999854322 236789999998654
No 53
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.59 E-value=1e-05 Score=64.49 Aligned_cols=49 Identities=29% Similarity=0.632 Sum_probs=38.1
Q ss_pred ccccCCC-CCCeEEeccCCCCCCCcccCCCCCCCCC-CCCcCccCcCCCCc
Q 013731 211 LCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPT-DNWLCQCCSNLNSN 259 (437)
Q Consensus 211 vCg~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP~-g~W~Cp~C~~~~~~ 259 (437)
+|+++.+ ...||.||.|+..||..|++-.....+. +.|+|+.|....+.
T Consensus 14 iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~ 64 (75)
T 3kqi_A 14 VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGK 64 (75)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCC
T ss_pred ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCC
Confidence 8888765 5689999999999999999944333333 57999999875433
No 54
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.23 E-value=7.5e-05 Score=69.29 Aligned_cols=53 Identities=28% Similarity=0.626 Sum_probs=40.2
Q ss_pred ccccccccCCCCC----CeEEeccCCCCCCCcccCCCCC------CCCC-CCCcCccCcCCCCc
Q 013731 207 QSCKLCGKADNTS----TMLLCDYCDEAFHPSCCNPRIK------ILPT-DNWLCQCCSNLNSN 259 (437)
Q Consensus 207 ~~C~vCg~~~~~~----~LLlCD~Cd~ayH~~CL~PPL~------~iP~-g~W~Cp~C~~~~~~ 259 (437)
.+|.+|++.-+++ .|+.||.|+..||..|.+..-. .+|+ ..|+|+.|....+.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 4688888876554 4999999999999999984321 2343 37999999887654
No 55
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.23 E-value=5.8e-05 Score=62.38 Aligned_cols=50 Identities=22% Similarity=0.664 Sum_probs=41.5
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCC------------CCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPR------------IKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PP------------L~~iP~g~W~Cp~C~~~ 256 (437)
+..|.||.... .+.++-|..|.+.||..||.++ +...+...|.|+.|..-
T Consensus 15 D~~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 15 DEMCDVCEVWT-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp SCCCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcccCcccccc-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 58899998766 4477889999999999999987 55667889999999553
No 56
>2ee1_A Chromodomain helicase-DNA-binding protein 4; EC 3.6.1.-, ATP- dependent helicase CHD4, CHD-4, MI-2 autoantigen 218 kDa protein, MI2-beta; NMR {Homo sapiens}
Probab=97.22 E-value=0.0001 Score=57.82 Aligned_cols=40 Identities=18% Similarity=0.361 Sum_probs=35.0
Q ss_pred ccCCCCcccchhhhhhcccCCCCcccCceeeeccccccccc
Q 013731 346 FSKPDSISNWLQCQEVLTNNDTNVCVEGTKCGKWRRAPFSE 386 (437)
Q Consensus 346 ~~~~~~~~nWlqc~evl~~~~~~~~~~~~icgKWRraP~~~ 386 (437)
++.+|..++|++..+||++ ..++.++..|+.|||.+||++
T Consensus 2 ~~~~~~~pe~~~VeRIi~~-r~~~~g~~eYLVKWkgl~y~e 41 (64)
T 2ee1_A 2 SSGSSGKPEWMMIHRILNH-SVDKKGHVHYLIKWRDLPYDQ 41 (64)
T ss_dssp CCCSSSCCSSCCCCCCCEE-EECTTCCEEEEECCTTSCTTT
T ss_pred CCccccCCCcEEEEEEEEE-EecCCCCEEEEEEEcCCCccc
Confidence 4678899999999999998 555667899999999999987
No 57
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.07 E-value=0.00015 Score=61.37 Aligned_cols=51 Identities=20% Similarity=0.487 Sum_probs=36.0
Q ss_pred ccccccccCCC-CCCeEEeccCCCCCCCcccCCCCCCCCCC----CCcCccCcCCC
Q 013731 207 QSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPTD----NWLCQCCSNLN 257 (437)
Q Consensus 207 ~~C~vCg~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g----~W~Cp~C~~~~ 257 (437)
..|..|....+ +..||.|+.|+.+||..|++++...++.+ .|+|+.|....
T Consensus 60 ~~c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 60 GEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp CCBCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred CcccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 34445544433 44699999999999999999887655544 49999998654
No 58
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.02 E-value=0.00041 Score=59.30 Aligned_cols=48 Identities=17% Similarity=0.385 Sum_probs=42.8
Q ss_pred cCCCcccccccccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcC
Q 013731 196 VSGTGHEISVIQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLC 250 (437)
Q Consensus 196 ~~~w~c~~c~~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~C 250 (437)
...|.|..| .|.+|++... +.|..|+.+||..|+.+.|..-+.+.|+|
T Consensus 51 ~g~W~Cp~c---~C~~C~k~~~----~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 51 YGKWECPWH---QCDECSSAAV----SFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp SSCCCCGGG---BCTTTCSBCC----EECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCEECCCC---CCCcCCCCCC----cCcCCCCcchhhhccCCcceecCCCCcee
Confidence 457999877 5999998863 78999999999999999999999999998
No 59
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.80 E-value=0.0001 Score=77.38 Aligned_cols=50 Identities=28% Similarity=0.704 Sum_probs=39.3
Q ss_pred ccccccccCCC-CCCeEEeccCCCCCCCcccCCCCCCCCC---CCCcCccCcCCCCc
Q 013731 207 QSCKLCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILPT---DNWLCQCCSNLNSN 259 (437)
Q Consensus 207 ~~C~vCg~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP~---g~W~Cp~C~~~~~~ 259 (437)
..| +|++..+ .+.|+.||.|+..||..|++ +...+. +.|+|+.|....+.
T Consensus 38 ~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvg--l~~~~~~~~~~~~C~~C~~~~~~ 91 (488)
T 3kv5_D 38 VYC-VCRQPYDVNRFMIECDICKDWFHGSCVG--VEEHHAVDIDLYHCPNCAVLHGS 91 (488)
T ss_dssp EET-TTTEECCTTSCEEEBTTTCCEEEHHHHT--CCGGGGGGEEEBCCHHHHHHHCS
T ss_pred eEE-eCCCcCCCCCCeEEccCCCCceeeeecC--cCcccccCCCEEECCCCcCCcCc
Confidence 445 8998864 67899999999999999999 444432 57999999876543
No 60
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.64 E-value=0.00051 Score=72.75 Aligned_cols=42 Identities=17% Similarity=0.384 Sum_probs=31.7
Q ss_pred CCCeEEeccCCCCCCCcccCCCCCCC-CCCCCcCccCcCCCCc
Q 013731 218 TSTMLLCDYCDEAFHPSCCNPRIKIL-PTDNWLCQCCSNLNSN 259 (437)
Q Consensus 218 ~~~LLlCD~Cd~ayH~~CL~PPL~~i-P~g~W~Cp~C~~~~~~ 259 (437)
...|+.||.|+..||..|++-.-... ..+.|+||.|....+.
T Consensus 55 ~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~gp 97 (528)
T 3pur_A 55 DFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTGH 97 (528)
T ss_dssp TTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHHCS
T ss_pred CCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCCCC
Confidence 44899999999999999999332222 2367999999875443
No 61
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=96.07 E-value=0.00029 Score=58.97 Aligned_cols=105 Identities=16% Similarity=0.230 Sum_probs=69.6
Q ss_pred CCCCCCCCcccCCCCC---------CCcchhhhHHHhhhccccccccccccccccccccCCC-cccccccccccccccCC
Q 013731 147 SDISNSDISRLEVLDE---------DPSAREFCVSVLRSNGLLGAVGECSVRSVASGEVSGT-GHEISVIQSCKLCGKAD 216 (437)
Q Consensus 147 dd~eeC~ic~~~~~~e---------d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~~~~~w-~c~~c~~~~C~vCg~~~ 216 (437)
.+..+|+||+..+... ..+.|.||..||.+|- ....+||+.+........- .-..-....|.+|...-
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~ 82 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGY 82 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHH--TTCSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBH
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHH--HhCCCCCCCCCcCccccccccccCCCCCCCCCCCCcc
Confidence 3456899999886322 2589999999999874 3447999988765432210 00111346788887653
Q ss_pred C----CCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 217 N----TSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 217 ~----~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
. ....+..-.|+..||..|+.+-+.. .-.||.|+..-
T Consensus 83 ~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~ 123 (133)
T 4ap4_A 83 SEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKI 123 (133)
T ss_dssp HHHHHTTCCEEEETTSBEEEHHHHHHHHHH----CSBCTTTCCBC
T ss_pred ccccccCcceEeCCCCChhhHHHHHHHHHc----CCCCCCCCCcC
Confidence 2 1234456689999999999876543 24899998654
No 62
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=95.69 E-value=0.00052 Score=71.48 Aligned_cols=46 Identities=33% Similarity=0.697 Sum_probs=36.8
Q ss_pred ccccCCC-CCCeEEeccCCCCCCCcccCCCCCCCC--C-CCCcCccCcCCCC
Q 013731 211 LCGKADN-TSTMLLCDYCDEAFHPSCCNPRIKILP--T-DNWLCQCCSNLNS 258 (437)
Q Consensus 211 vCg~~~~-~~~LLlCD~Cd~ayH~~CL~PPL~~iP--~-g~W~Cp~C~~~~~ 258 (437)
+|++..+ .+.|+.||.|+..||..|++ +...+ . +.|+|+.|....+
T Consensus 9 iC~~~~d~~~~MIqCD~C~~WfH~~CVg--i~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 9 LCRLPYDVTRFMIECDMCQDWFHGSCVG--VEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHT--CCHHHHTTEEECCCHHHHHHHC
T ss_pred eCCCcCCCCCCeEEcCCCCcccccccCC--cCcccccCCCEEECCCCccccC
Confidence 8888755 67999999999999999999 44332 2 6799999976543
No 63
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.00 E-value=0.011 Score=45.53 Aligned_cols=49 Identities=16% Similarity=0.204 Sum_probs=35.7
Q ss_pred CCCCCCCCCCcccCCCCCC-----CcchhhhHHHhhhccccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDED-----PSAREFCVSVLRSNGLLGAVGECSVRSVASGE 195 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~ed-----~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~~ 195 (437)
..++..+|+||+..+...+ .|.|.||..||..|- ....+||+.+.....
T Consensus 19 ~~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~--~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 19 HQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL--KANRTCPICRADSGP 72 (75)
T ss_dssp CSSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHH--HHCSSCTTTCCCCCC
T ss_pred ccCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHH--HcCCcCcCcCCcCCC
Confidence 3455678999998875442 489999999999884 333788888765443
No 64
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.24 E-value=0.036 Score=42.27 Aligned_cols=49 Identities=12% Similarity=0.027 Sum_probs=36.5
Q ss_pred cCCCCCCCCCCcccCCCCCC-----CcchhhhHHHhhhcccccccccccccccccc
Q 013731 144 TEGSDISNSDISRLEVLDED-----PSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 144 ~~~dd~eeC~ic~~~~~~ed-----~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
.+.++...|+||+..+.... .|.|.||..||.+|-... .+||+.+....
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~--~~CP~Cr~~~~ 63 (74)
T 2ep4_A 10 KELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR--KVCPLCNMPVL 63 (74)
T ss_dssp CCCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC--SBCTTTCCBCS
T ss_pred ccCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC--CcCCCcCcccc
Confidence 34566778999999975432 589999999999885333 68888876543
No 65
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=93.89 E-value=0.047 Score=41.06 Aligned_cols=48 Identities=13% Similarity=0.071 Sum_probs=34.8
Q ss_pred CCCCCCCCCCcccCCCCC-----CCcchhhhHHHhhhcccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE-----DPSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e-----d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
+.++..+|+||+..+... ..|.|.||..||.+|-.. ..+||+.+....
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~--~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT--NKKCPICRVDIE 62 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH--CSBCTTTCSBSC
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc--CCCCcCcCcccc
Confidence 455667899998876432 248999999999988533 367888776543
No 66
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=93.76 E-value=0.04 Score=42.44 Aligned_cols=48 Identities=10% Similarity=0.023 Sum_probs=35.1
Q ss_pred CCCCCCCCCCcccCCCCCC-----CcchhhhHHHhhhcccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDED-----PSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~ed-----~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
..++..+|+||+..+...+ .|.|.||..||.+|- ....+||+.+....
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWL--EQHDSCPVCRKSLT 63 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHH--TTTCSCTTTCCCCC
T ss_pred cCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHH--HcCCcCcCcCCccC
Confidence 3455678999998875432 599999999999884 33378888776543
No 67
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=93.69 E-value=0.051 Score=38.97 Aligned_cols=44 Identities=14% Similarity=0.173 Sum_probs=32.7
Q ss_pred CCCCCCCCCcccCCCCCC------CcchhhhHHHhhhccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDED------PSAREFCVSVLRSNGLLGAVGECSVRSV 191 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~ed------~s~h~fCis~L~s~g~l~~v~~Cp~~~~ 191 (437)
.++..+|+||...+..++ .+.|.||..||.+|- ....+||+.+.
T Consensus 2 ~~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~--~~~~~CP~Cr~ 51 (55)
T 1iym_A 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL--GSHSTCPLCRL 51 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT--TTCCSCSSSCC
T ss_pred CCCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHH--HcCCcCcCCCC
Confidence 456779999998874422 389999999999885 33467777664
No 68
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=93.67 E-value=0.025 Score=46.74 Aligned_cols=51 Identities=14% Similarity=0.082 Sum_probs=35.8
Q ss_pred CCCCCCCcccCCCCC--------------------CCcchhhhHHHhhhcccc---ccccccccccccccccCC
Q 013731 148 DISNSDISRLEVLDE--------------------DPSAREFCVSVLRSNGLL---GAVGECSVRSVASGEVSG 198 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--------------------d~s~h~fCis~L~s~g~l---~~v~~Cp~~~~t~~~~~~ 198 (437)
..++|+||+..+... ..|.|.||.+||.+|-.. ....+||+.|..+....+
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~g 97 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTG 97 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCCC
Confidence 345899999887332 248999999999988421 223689988877655443
No 69
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.46 E-value=0.088 Score=39.77 Aligned_cols=52 Identities=10% Similarity=0.077 Sum_probs=34.8
Q ss_pred ccccCCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccc-cccccccccccc
Q 013731 141 NRNTEGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLL-GAVGECSVRSVA 192 (437)
Q Consensus 141 s~~~~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l-~~v~~Cp~~~~t 192 (437)
....+.++...|+||...+... ..|.|.||..||..|-.. .....||+.+..
T Consensus 12 ~~~~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 12 QFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTS 66 (73)
T ss_dssp CCCCCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCC
T ss_pred HHHHhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCc
Confidence 3344566777899999887432 369999999999887421 112456666543
No 70
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.32 E-value=0.027 Score=41.92 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=34.0
Q ss_pred CCCCCCCCCCcccCCCC---------CCCcchhhhHHHhhhcccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLD---------EDPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~---------ed~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
...+..+|+||+..+.. -..|.|.||..||.+|- ....+||+.+..
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~ 65 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKK 65 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHH--HHCSSCTTTCCC
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHH--HcCCCCCCCCCc
Confidence 45667789999988632 13689999999999874 334778877654
No 71
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=93.07 E-value=0.017 Score=48.35 Aligned_cols=38 Identities=29% Similarity=0.628 Sum_probs=29.7
Q ss_pred CeEEeccCCCCCCCcccCCCC------CCCCC-CCCcCccCcCCC
Q 013731 220 TMLLCDYCDEAFHPSCCNPRI------KILPT-DNWLCQCCSNLN 257 (437)
Q Consensus 220 ~LLlCD~Cd~ayH~~CL~PPL------~~iP~-g~W~Cp~C~~~~ 257 (437)
.|+.||.|+.+||..|.+-.- ..+|+ -.|.||.|....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 489999999999999998432 35564 369999997644
No 72
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.26 E-value=0.1 Score=39.72 Aligned_cols=48 Identities=15% Similarity=0.154 Sum_probs=35.4
Q ss_pred CCCCCCCCCCcccCCCCC---CCcchhhhHHHhhhcccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e---d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
+.++...|+||...+... ..|.|.||..||.+|- .....||+.+....
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 11 ELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHF--YYSNRCPKCNIVVH 61 (72)
T ss_dssp CCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHH--HHCSSCTTTCCCCC
T ss_pred hcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHH--HcCCcCCCcCcccC
Confidence 445567899999887554 2699999999998875 32378888776543
No 73
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.67 E-value=0.17 Score=37.26 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=28.3
Q ss_pred cccCCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcc
Q 013731 142 RNTEGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNG 178 (437)
Q Consensus 142 ~~~~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g 178 (437)
...+.++...|+||...+... ..|.|.||..||.+|-
T Consensus 13 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~ 51 (63)
T 2ysj_A 13 FVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIG 51 (63)
T ss_dssp CCCCCCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHH
T ss_pred HHHhCccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHH
Confidence 334566777899999887443 3699999999998874
No 74
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.64 E-value=0.11 Score=39.50 Aligned_cols=46 Identities=15% Similarity=0.325 Sum_probs=33.5
Q ss_pred CCCCCCCCCcccCCCCC--CCcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
..+..+|+||+..+... ..|.|.||..||.+|-... .+||+.+...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~--~~CP~Cr~~~ 59 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLG--KRCALCRQEI 59 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCS--SBCSSSCCBC
T ss_pred CCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCC--CcCcCcCchh
Confidence 34556899999886432 2589999999999875333 7788877653
No 75
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=91.32 E-value=0.12 Score=39.65 Aligned_cols=48 Identities=17% Similarity=0.156 Sum_probs=33.5
Q ss_pred CCCCCCCCCCcccCCCCC--CC-cchhhhHHHhhhcccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE--DP-SAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e--d~-s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
+..+...|+||...+... .. |.|.||..||..|-.......||+.+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 11 PIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred cCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 345566899999887554 34 8999999999887432222467776653
No 76
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=91.16 E-value=0.098 Score=41.98 Aligned_cols=45 Identities=18% Similarity=0.130 Sum_probs=32.9
Q ss_pred CCCCCCCCCcccCCCCCC-----CcchhhhHHHhhhcccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDED-----PSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~ed-----~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
.++...|+||+..+...+ .|.|.||..||..|- ....+||+.+..
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl--~~~~~CP~Cr~~ 86 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWL--QKSGTCPVCRCM 86 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHH--TTTCBCTTTCCB
T ss_pred cCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHH--HcCCcCcCcCcc
Confidence 345567999998764422 489999999999885 333788887754
No 77
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=90.71 E-value=0.14 Score=38.20 Aligned_cols=45 Identities=13% Similarity=0.136 Sum_probs=34.0
Q ss_pred CCCCCCCCcccCCCCC---CCcchhhhHHHhhhccccccccccccccccc
Q 013731 147 SDISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 147 dd~eeC~ic~~~~~~e---d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
++..+|+||...+... ..|.|.||..|+..|- ....+||+.+...
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~~~ 50 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCLHAFCYVCITRWI--RQNPTCPLCKVPV 50 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHH--HHSCSTTTTCCCC
T ss_pred CCCCCCeeCCccccCCcEecCCCCeeHHHHHHHHH--hCcCcCcCCChhh
Confidence 4456899999987543 4689999999998874 3337888887654
No 78
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=90.70 E-value=0.19 Score=46.45 Aligned_cols=49 Identities=12% Similarity=0.229 Sum_probs=34.2
Q ss_pred ccccCCCC-CCeEEeccCCCCCCCcccCCCCCCCCCC----CCcCccCcCCCCc
Q 013731 211 LCGKADNT-STMLLCDYCDEAFHPSCCNPRIKILPTD----NWLCQCCSNLNSN 259 (437)
Q Consensus 211 vCg~~~~~-~~LLlCD~Cd~ayH~~CL~PPL~~iP~g----~W~Cp~C~~~~~~ 259 (437)
-||+.++- ..||.|+.|.+.||..|+..+...+-.+ ...|..|...+.+
T Consensus 9 YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g~E 62 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNT 62 (177)
T ss_dssp --CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTSSC
T ss_pred EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCCcc
Confidence 57777654 4899999999999999998655443223 3558888765534
No 79
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=90.54 E-value=0.25 Score=39.16 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=32.7
Q ss_pred CCCCCCCCCCcccCCCCCC------CcchhhhHHHhhhcccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDED------PSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~ed------~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
+..+...|+||+..+...+ .|.|.||..||...-. .....||..|....
T Consensus 7 ~~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~-~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 7 AKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRT-DENGLCPACRKPYP 61 (78)
T ss_dssp CCCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTT-SSCSBCTTTCCBCS
T ss_pred ccccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHh-cCCCCCCCCCCccC
Confidence 3456678999999885442 2999999999965310 12356777666543
No 80
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.53 E-value=0.15 Score=39.58 Aligned_cols=46 Identities=15% Similarity=0.099 Sum_probs=33.5
Q ss_pred CCCCCCCCCcccCCCCC--CCcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
.++...|+||...+... ..|.|.||..||.+|- .....||+.+...
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~ 59 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHF--RATPRCYICDQPT 59 (81)
T ss_dssp CCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHH--HHCSBCSSSCCBC
T ss_pred CCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHH--HCCCcCCCcCccc
Confidence 44456799999887443 3689999999998874 3346788776643
No 81
>2epb_A Chromodomain-helicase-DNA-binding protein 6; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.01 E-value=0.066 Score=41.93 Aligned_cols=36 Identities=14% Similarity=0.304 Sum_probs=26.9
Q ss_pred CcccchhhhhhcccCC-CCc-cc--Cceeeeccccccccc
Q 013731 351 SISNWLQCQEVLTNND-TNV-CV--EGTKCGKWRRAPFSE 386 (437)
Q Consensus 351 ~~~nWlqc~evl~~~~-~~~-~~--~~~icgKWRraP~~~ 386 (437)
..++|++..+||++-. .+. .+ ...|++||+.+||++
T Consensus 7 ~~pe~~~VErIl~~r~~~~~~~g~~~~eYLVKWkgl~y~e 46 (68)
T 2epb_A 7 GNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEE 46 (68)
T ss_dssp SCSSCCCCCEEEEEEEEECSSSCCEEEEEEEECTTSCGGG
T ss_pred CCCCceEEeEEEEEEecccccCCCcceEEEEEEcCCChhc
Confidence 4578999999999621 111 13 568999999999996
No 82
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=89.95 E-value=0.17 Score=36.07 Aligned_cols=44 Identities=16% Similarity=0.083 Sum_probs=31.8
Q ss_pred CCCCCCCCcccCCCCC------CCcchhhhHHHhhhcccccccccccccccc
Q 013731 147 SDISNSDISRLEVLDE------DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 147 dd~eeC~ic~~~~~~e------d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
.+..+|+||...+... ..+.|.||..||.+|-... .+||+.+..
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~--~~CP~Cr~~ 52 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG--YRCPLCSGP 52 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT--CCCTTSCCS
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC--CcCCCCCCc
Confidence 3456899999887432 2489999999999875333 778876643
No 83
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.77 E-value=0.3 Score=34.99 Aligned_cols=33 Identities=6% Similarity=0.059 Sum_probs=26.2
Q ss_pred CCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhc
Q 013731 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSN 177 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~ 177 (437)
+.++...|+||...+... ..+.|.||..||.+|
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~ 45 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRW 45 (58)
T ss_dssp CSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHH
T ss_pred ccccCCCCccCCcccCccEeCCCCCccCHHHHHHH
Confidence 455667899999887433 468999999999987
No 84
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=89.32 E-value=0.099 Score=39.16 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=34.0
Q ss_pred CCCCCCCCCCcccCCCC---------CCCcchhhhHHHhhhccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLD---------EDPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~---------ed~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
..++..+|+||...+.. -..|.|.||..||.+|- .+..+||+.+...
T Consensus 6 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 61 (71)
T 3ng2_A 6 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKI 61 (71)
T ss_dssp CCTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHH--HHCSBCTTTCCBC
T ss_pred CCCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHH--HcCCCCCCCCCcc
Confidence 34556789999988632 23589999999999874 3347888877643
No 85
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=89.16 E-value=0.27 Score=37.52 Aligned_cols=35 Identities=6% Similarity=0.067 Sum_probs=26.8
Q ss_pred cCCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcc
Q 013731 144 TEGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNG 178 (437)
Q Consensus 144 ~~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g 178 (437)
.+..+...|+||...+... ..|.|.||..||.+|-
T Consensus 7 ~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~ 43 (79)
T 2egp_A 7 GNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSN 43 (79)
T ss_dssp CCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCC
T ss_pred hhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHH
Confidence 3456667899999887433 3699999999998764
No 86
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=88.38 E-value=0.48 Score=36.22 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=27.1
Q ss_pred cCCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcc
Q 013731 144 TEGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNG 178 (437)
Q Consensus 144 ~~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g 178 (437)
.+..+...|+||...+... ..|.|.||..||..|-
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~ 50 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNY 50 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHH
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHH
Confidence 3456677899999887543 3599999999998764
No 87
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.28 E-value=0.28 Score=36.82 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=34.4
Q ss_pred CCCCCCCCCCcccCCCCC-CCcchhhhHHHhhhccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE-DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e-d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+..+...|+||...+..- ..|.|.||..||..|-. ...+||+.+...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~ 58 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWSD--RHRNCPICRLQM 58 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSSC--CCSSCHHHHHCT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHHH--CcCcCCCcCCcc
Confidence 455677899999886441 24889999999998753 347888876543
No 88
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=88.00 E-value=0.23 Score=39.29 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=33.7
Q ss_pred CCCCCCCCCCcccCCCCC--CC-cchhhhHHHhhhccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE--DP-SAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e--d~-s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+..+.-.|+||...+... .. |.|.||..||..|-.-.+...||+.+...
T Consensus 9 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 9 PIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 455666799999887544 24 89999999998773222224677776543
No 89
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=87.07 E-value=0.3 Score=40.97 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=31.5
Q ss_pred CCCCCCcccCCCCC--------------------CCcchhhhHHHhhhcccccccccccccccc
Q 013731 149 ISNSDISRLEVLDE--------------------DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 149 ~eeC~ic~~~~~~e--------------------d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
.+.|+||...+... ..|.|.|+..||..|- ....+||+.|..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl--~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQVCPLDNRE 98 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHH--TTCSBCSSSCSB
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHH--HcCCcCcCCCCc
Confidence 35799998876432 2588999999999984 334889988865
No 90
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.64 E-value=0.73 Score=35.16 Aligned_cols=49 Identities=14% Similarity=0.185 Sum_probs=32.8
Q ss_pred cCCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccc----cccccccccccc
Q 013731 144 TEGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLL----GAVGECSVRSVA 192 (437)
Q Consensus 144 ~~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l----~~v~~Cp~~~~t 192 (437)
.+..+...|+||...+... ..|.|.||..|+..|-.. .....||+.+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCc
Confidence 3456677899999887433 369999999999876322 012456655543
No 91
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=86.49 E-value=0.12 Score=37.80 Aligned_cols=44 Identities=14% Similarity=0.196 Sum_probs=31.9
Q ss_pred CCCCCCCcccCCCC---------CCCcchhhhHHHhhhccccccccccccccccc
Q 013731 148 DISNSDISRLEVLD---------EDPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 148 d~eeC~ic~~~~~~---------ed~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+..+|+||...+.. -..|.|.||..|+.+|- ....+||+.+...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 54 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKI 54 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHH--HHCSBCTTTCCBC
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHH--HcCCCCCCCCccC
Confidence 45689999988632 13589999999998874 3346788776543
No 92
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.47 E-value=0.57 Score=36.27 Aligned_cols=48 Identities=13% Similarity=0.059 Sum_probs=32.3
Q ss_pred CCCCCCCCCCcccCCCCC------CCcchhhhHHHhhhccccc-ccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE------DPSAREFCVSVLRSNGLLG-AVGECSVRSVA 192 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e------d~s~h~fCis~L~s~g~l~-~v~~Cp~~~~t 192 (437)
+..+..+|+||...+... ..|.|.||..||..|-... +...||+.+..
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKI 65 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCC
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCc
Confidence 455667899999887552 2589999999998873211 12456665543
No 93
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.22 E-value=0.38 Score=37.76 Aligned_cols=44 Identities=18% Similarity=0.269 Sum_probs=31.7
Q ss_pred CCCCCCCcccCCCC-----------CC------CcchhhhHHHhhhccccccccccccccccc
Q 013731 148 DISNSDISRLEVLD-----------ED------PSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 148 d~eeC~ic~~~~~~-----------ed------~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+.+.|+||+..+.. ++ .|.|.|+..||.+|-... .+||+.|...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~--~~CP~CR~~~ 74 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN--NRCPLCQQDW 74 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC--CBCTTTCCBC
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC--CCCCCcCCCc
Confidence 34568888887632 22 389999999999985333 7899887643
No 94
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=85.38 E-value=0.12 Score=43.37 Aligned_cols=35 Identities=20% Similarity=0.444 Sum_probs=29.3
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (437)
.+|.+|++.+ |+.|+..||++|+++| .|.|..|..
T Consensus 8 ~~C~~C~~~~-------C~~C~~c~~~~~~~~~-------~~~~~~c~~ 42 (117)
T 4bbq_A 8 RKCKACVQGE-------CGVCHYCRDMKKFGGP-------GRMKQSCVL 42 (117)
T ss_dssp SCSHHHHSCC-------CSCSHHHHHSGGGTSC-------CCSCCCCGG
T ss_pred CcCcCcCCcC-------CCCCCCCcCCcccCCC-------Cccccchhh
Confidence 7888998864 9999999999999876 488887754
No 95
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.33 E-value=0.56 Score=34.85 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=32.6
Q ss_pred CCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
...+.-.|+||...+... ..|.|.||..||.+|-. .....||+.+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLS-SSSPKCTACQES 59 (66)
T ss_dssp SCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHT-TSSCCCTTTCCC
T ss_pred cCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHH-hCcCCCCCCCcC
Confidence 345556799999886433 47999999999988742 223567776654
No 96
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=84.19 E-value=0.095 Score=53.72 Aligned_cols=52 Identities=21% Similarity=0.629 Sum_probs=40.3
Q ss_pred ccccccccccccCCCCCCeEEec--cCCCCCCCcccCCCCC-----C-CCCCCCcCccCcCCC
Q 013731 203 ISVIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIK-----I-LPTDNWLCQCCSNLN 257 (437)
Q Consensus 203 ~c~~~~C~vCg~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~-----~-iP~g~W~Cp~C~~~~ 257 (437)
+..+..|..|+.++ .+++|| .|.+.|=..|+.--+- . .....|.|--|....
T Consensus 90 DG~~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 90 DGYQSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SSSBCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCcccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 33458999999887 899999 9999999999874331 1 233679999998765
No 97
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=83.76 E-value=0.43 Score=35.39 Aligned_cols=45 Identities=11% Similarity=0.161 Sum_probs=30.4
Q ss_pred CCCCCCCccc-CCCCC------CCcchhhhHHHhhhccccccccccccccccc
Q 013731 148 DISNSDISRL-EVLDE------DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 148 d~eeC~ic~~-~~~~e------d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+...|+||.. .+... ..|.|.||..||.+|-. .+...||+.+...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~ 53 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-RGAGNCPECGTPL 53 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-TTSSSCTTTCCCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-cCCCcCCCCCCcc
Confidence 3457999998 44333 36999999999988721 2235677766543
No 98
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=83.07 E-value=0.37 Score=41.39 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=31.0
Q ss_pred CCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccc
Q 013731 150 SNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 150 eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
-.|+||...+... ..|.|.||..||..|- ....+||+.+..
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCEEEHHHHHHHT--TTCSBCTTTCCB
T ss_pred CCCcccCcccCCceECCCCCCccHHHHHHHH--HcCCcCCCCCCc
Confidence 3699999887433 2589999999999875 334778887764
No 99
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=82.03 E-value=0.92 Score=33.06 Aligned_cols=43 Identities=12% Similarity=0.166 Sum_probs=31.2
Q ss_pred CCCCCCCCCcccCCCCC--CCcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
..+.-.|+||...+... ..+.|.||..||..+ ...||+.+...
T Consensus 3 e~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~-----~~~CP~Cr~~~ 47 (56)
T 1bor_A 3 EFQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS-----GMQCPICQAPW 47 (56)
T ss_dssp SCCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS-----SSSCSSCCSSS
T ss_pred cccCCCceEeCCccCCeEEcCCCCcccHHHHccC-----CCCCCcCCcEe
Confidence 34556799999887443 358999999999763 26788877643
No 100
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=81.07 E-value=0.51 Score=38.94 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=31.6
Q ss_pred CCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccc
Q 013731 147 SDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 147 dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
.+.-.|+||...+... ..|.|.||..||..|-.. ....||+.+..
T Consensus 13 ~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~~ 59 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEK-ASLCCPFCRRR 59 (115)
T ss_dssp HHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCT-TTSBCTTTCCB
T ss_pred CCCCCCccCCcccCceeEcCCCCHHhHHHHHHHHhH-CcCCCCCCCcc
Confidence 3345699999887433 369999999999877422 13577777664
No 101
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=79.73 E-value=0.32 Score=39.11 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=33.6
Q ss_pred CCCCCCCCCcccCCCCC--C-CcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--D-PSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d-~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
.++...|+||...+... . .|.|.||..||..|-. ...+||+.+...
T Consensus 19 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~ 67 (99)
T 2y43_A 19 IDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS--YKTQCPTCCVTV 67 (99)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT--TCCBCTTTCCBC
T ss_pred CCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH--CCCCCCCCCCcC
Confidence 34556899999887544 2 5999999999988753 336788777643
No 102
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=78.66 E-value=0.54 Score=38.19 Aligned_cols=47 Identities=13% Similarity=0.105 Sum_probs=33.5
Q ss_pred CCCCCCCCCcccCCCCC---CCcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e---d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
.++...|+||+..+... ..|.|.||..||..|-.... .+||+.+...
T Consensus 19 l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~-~~CP~Cr~~~ 68 (100)
T 3lrq_A 19 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQR-AQCPHCRAPL 68 (100)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTC-SBCTTTCCBC
T ss_pred CCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCc-CCCCCCCCcC
Confidence 34556799999987543 46899999999988742221 4788877654
No 103
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=78.63 E-value=0.46 Score=40.85 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=0.0
Q ss_pred CCCCCcccCCCCC--------------------CCcchhhhHHHhhhcccccccccccccccc
Q 013731 150 SNSDISRLEVLDE--------------------DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 150 eeC~ic~~~~~~e--------------------d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
+.|+||+..+... ..|.|.|+..||.+|-.. ..+||+.|..
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~--~~~CP~Cr~~ 109 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT--RQVCPLDNRE 109 (117)
T ss_dssp ---------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc--CCcCCCCCCe
Confidence 5799999887321 158999999999988533 3789988764
No 104
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=77.46 E-value=0.43 Score=43.74 Aligned_cols=86 Identities=9% Similarity=0.075 Sum_probs=51.3
Q ss_pred eecCCCceeecC---CCCcccccccccCCCCCC--CChhhhcccc--cccc--CCcc--------------CCCCcccch
Q 013731 300 VRIGESYQAEVP---DWSDQISSNLDSFSEPLE--MDPAETVGLN--VQFS--NQFS--------------KPDSISNWL 356 (437)
Q Consensus 300 vRiGr~fqa~Vp---~W~~~~~s~~~~~~EP~~--~D~~~~~~l~--~~~~--~~~~--------------~~~~~~nWl 356 (437)
.+...+|.++|- ++|+.|.++.+..+-|-. |+. -..+.. +... ++.. .....++|+
T Consensus 43 ~~~~~EYlVKWKg~Sy~HnTWe~ee~L~~~~glkKl~n-f~kk~~~~e~~~~~~~~~~~ed~E~~~~~~e~~~~~~~e~~ 121 (177)
T 2h1e_A 43 CKENYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDN-YCKQFIIEDQQVRLDPYVTAEDIEIMDMERERRLDEFEEFH 121 (177)
T ss_dssp HHHHEEEEEEETTSCGGGCEEECHHHHCSCTTHHHHHH-HHHHHTHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEEEEECCCccccCeecCHHHHhhchHHHHHHH-HHHHhhhhhhhhhcccCCChHHHHHhhhhhhhhhhcccccc
Confidence 356689999997 789999887554332211 110 000000 0000 0000 011347899
Q ss_pred hhhhhcccCCC---CcccCceeeeccccccccc
Q 013731 357 QCQEVLTNNDT---NVCVEGTKCGKWRRAPFSE 386 (437)
Q Consensus 357 qc~evl~~~~~---~~~~~~~icgKWRraP~~~ 386 (437)
+..+||++-.. +..+...|++||+.+||++
T Consensus 122 ~VErIi~~r~~~~~~~~~~~~YLVKWkgl~y~e 154 (177)
T 2h1e_A 122 VPERIIDSQRASLEDGTSQLQYLVKWRRLNYDE 154 (177)
T ss_dssp SEEEEEEEEEEECTTSCEEEEEEEEETTSCSTT
T ss_pred eeEEEEEEeeecccCCCCcEEEEEEeCCCCccc
Confidence 99999997321 4567789999999999987
No 105
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=76.11 E-value=0.75 Score=37.57 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=33.3
Q ss_pred CCCCCCCCCcccCCCCC---CCcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e---d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
..+.-.|+||...+... ..|.|.||..||..|- .....||+.+...
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~ 60 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQV 60 (108)
T ss_dssp HGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHH--TSCSBCTTTCCBS
T ss_pred cCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHH--HhCCcCcCCCccc
Confidence 34556899999887544 2699999999998874 3236777776543
No 106
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=75.53 E-value=1.4 Score=35.66 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=28.8
Q ss_pred CCCCCCCcccCCCCC--CCcchhhhHHHhhhccccc-cccccccccc
Q 013731 148 DISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLG-AVGECSVRSV 191 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~-~v~~Cp~~~~ 191 (437)
+.-.|+||...+... ..|.|.||..||..|-... ....||+.+.
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~ 66 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKN 66 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSC
T ss_pred CCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCC
Confidence 345799999887433 3699999999998764211 0125665554
No 107
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=75.50 E-value=1.1 Score=37.39 Aligned_cols=47 Identities=13% Similarity=0.104 Sum_probs=32.8
Q ss_pred CCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccccc
Q 013731 147 SDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 147 dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
.+.-.|+||...+... ..|.|.||..||..|-. .....||+.+....
T Consensus 50 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 50 EETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR-AQVFSCPACRYDLG 98 (124)
T ss_dssp HHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCC
T ss_pred ccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh-HCcCCCCCCCccCC
Confidence 4445799999887433 36999999999987642 22247887776543
No 108
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=74.59 E-value=0.61 Score=42.43 Aligned_cols=52 Identities=21% Similarity=0.606 Sum_probs=40.7
Q ss_pred ccccccccccccCCCCCCeEEec--cCCCCCCCcccCCCCC-----C-CCCCCCcCccCcCCC
Q 013731 203 ISVIQSCKLCGKADNTSTMLLCD--YCDEAFHPSCCNPRIK-----I-LPTDNWLCQCCSNLN 257 (437)
Q Consensus 203 ~c~~~~C~vCg~~~~~~~LLlCD--~Cd~ayH~~CL~PPL~-----~-iP~g~W~Cp~C~~~~ 257 (437)
+.....|.+|+.++ .+++|| .|.+.|=..|+.--+- + +....|.|--|....
T Consensus 76 DG~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 76 DGYQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp TSSBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 34458999999887 999999 8999999999863322 1 456789999998765
No 109
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=73.45 E-value=1.8 Score=32.86 Aligned_cols=46 Identities=11% Similarity=-0.028 Sum_probs=32.5
Q ss_pred CCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
..+.-.|+||...+... -.|.|.||-.||.+|-.. +..+||+.+..
T Consensus 5 ~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~-~~~~CP~C~~~ 52 (78)
T 1t1h_A 5 FPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDA-GHKTCPKSQET 52 (78)
T ss_dssp CSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTT-TCCBCTTTCCB
T ss_pred CcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHH-CcCCCCCCcCC
Confidence 44556799999887443 258999999999887421 14678876654
No 110
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=73.05 E-value=1.1 Score=39.23 Aligned_cols=43 Identities=12% Similarity=0.088 Sum_probs=29.9
Q ss_pred CCCCCCCcccCCCCC---CCcchhhhHHHhhhccccccccccccccc
Q 013731 148 DISNSDISRLEVLDE---DPSAREFCVSVLRSNGLLGAVGECSVRSV 191 (437)
Q Consensus 148 d~eeC~ic~~~~~~e---d~s~h~fCis~L~s~g~l~~v~~Cp~~~~ 191 (437)
+.-.|+||...+... ..|.|.||..||..|-.. ....||+.+.
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~ 98 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRS-GNKECPTCRK 98 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHT-TCCBCTTTCC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHh-CcCCCCCCCC
Confidence 344799999887554 368999999999887421 1245665554
No 111
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=72.74 E-value=1.3 Score=36.91 Aligned_cols=49 Identities=12% Similarity=0.142 Sum_probs=34.1
Q ss_pred CCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
...+.-.|+||...+... ..|.|.||..||..|-... ..+||+.+....
T Consensus 14 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-~~~CP~Cr~~~~ 64 (118)
T 3hct_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDA-GHKCPVDNEILL 64 (118)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHH-CSBCTTTCCBCC
T ss_pred CCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhC-CCCCCCCCCCcC
Confidence 455566899999887432 3599999999998864222 137888776543
No 112
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=72.27 E-value=0.71 Score=42.63 Aligned_cols=36 Identities=14% Similarity=0.296 Sum_probs=28.3
Q ss_pred CcccchhhhhhcccCCC-CcccCceeeeccccccccc
Q 013731 351 SISNWLQCQEVLTNNDT-NVCVEGTKCGKWRRAPFSE 386 (437)
Q Consensus 351 ~~~nWlqc~evl~~~~~-~~~~~~~icgKWRraP~~~ 386 (437)
..++|++..+||++... +..+...|++||+.+||++
T Consensus 126 ~~~e~~~VErIi~~r~~~~~~g~~~yLVKWkgl~Y~e 162 (187)
T 2b2y_A 126 LHKQYQIVGRIIAHSNQKSAAGYPDYYCKWQGLPYSE 162 (187)
T ss_dssp HHHHTTSEEEEEEEEEEECTTSCEEEEEEETTSCGGG
T ss_pred hhhhcceeEEEEEeeeecCCCCcEEEEEEECCCChhh
Confidence 35789999999997321 1356789999999999986
No 113
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=70.82 E-value=0.85 Score=37.58 Aligned_cols=45 Identities=16% Similarity=0.188 Sum_probs=32.6
Q ss_pred CCCCCCCCcccCCCC---------CCCcchhhhHHHhhhccccccccccccccccc
Q 013731 147 SDISNSDISRLEVLD---------EDPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 147 dd~eeC~ic~~~~~~---------ed~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
++..+|+||+..+.. ...+.|.||..||.+|- ....+||+.+...
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 123 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKI 123 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHH--HHCSBCTTTCCBC
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHH--HcCCCCCCCCCcC
Confidence 456679999988632 22589999999999874 4447888777543
No 114
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.26 E-value=3.6 Score=32.66 Aligned_cols=48 Identities=17% Similarity=0.027 Sum_probs=31.7
Q ss_pred CCCCCCCCCcccCCCCCC----Cc-----chhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDED----PS-----AREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~ed----~s-----~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
..+...|.||+..+..++ .| .|.|..+||.+|=...+..+||+.+..+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~ 68 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 68 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBC
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCee
Confidence 445568999997764322 24 3999999999985333224777776654
No 115
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=69.19 E-value=1.8 Score=37.93 Aligned_cols=46 Identities=13% Similarity=0.052 Sum_probs=32.0
Q ss_pred CCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccccc
Q 013731 148 DISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
+.-.|+||...+... ..|.|.||..||..|-.. ...+||+.+....
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~~~~ 124 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKA-QVFSCPACRHDLG 124 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHT-TCCBCTTTCCBCC
T ss_pred cCCEeecCChhhcCCEEcCCCCchhHHHHHHHHHh-CCCcCCCCCccCC
Confidence 445799999887443 469999999999877421 1236887766543
No 116
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=69.15 E-value=2.4 Score=35.11 Aligned_cols=44 Identities=11% Similarity=0.119 Sum_probs=33.6
Q ss_pred CCCCCCCCCcccCCCCC--C-CcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--D-PSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d-~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
..+.-.|+||...+... . .|.|.||..||..|- . ..||+.+...
T Consensus 19 l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~--~--~~CP~Cr~~~ 65 (117)
T 1jm7_B 19 LEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCI--G--TGCPVCYTPA 65 (117)
T ss_dssp HHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGT--T--TBCSSSCCBC
T ss_pred chhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHh--c--CCCcCCCCcC
Confidence 34566899999887544 2 599999999998774 3 6799887754
No 117
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=65.10 E-value=2.3 Score=43.56 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=32.3
Q ss_pred CCCCCCCcccCCCCC--CCcchhhhHHHhhhccccccccccccccccc
Q 013731 148 DISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+..+|+||...+... ..|.|.||..|+..|-.- ...+||++|...
T Consensus 331 ~~~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~-~~~~CP~CR~~i 377 (389)
T 2y1n_A 331 TFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQES-EGQGCPFCRCEI 377 (389)
T ss_dssp SSSBCTTTSSSBCCEEEETTCCEECHHHHHHHHHH-TCSBCTTTCCBC
T ss_pred CCCCCCccCcCCCCeEEeCCCChhhHHHHHHHHhc-CCCCCCCCCCcc
Confidence 346899998876443 369999999999877421 347788877643
No 118
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=64.00 E-value=2.6 Score=34.65 Aligned_cols=48 Identities=10% Similarity=-0.016 Sum_probs=33.8
Q ss_pred CCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
..+.-.|+||...+... -.|.|.||..||.+|-... ..+||+.+....
T Consensus 20 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 20 FVKSISCQICEHILADPVETSCKHLFCRICILRCLKVM-GSYCPSCRYPCF 69 (116)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHT-CSBCTTTCCBCC
T ss_pred ccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHC-cCcCCCCCCCCC
Confidence 33456799999887433 3699999999998874321 267888776543
No 119
>4hae_A CDY-like 2, chromodomain Y-like protein 2; protein binding, structural genomics consortiu; 2.00A {Homo sapiens}
Probab=63.75 E-value=1.3 Score=35.76 Aligned_cols=41 Identities=7% Similarity=0.084 Sum_probs=32.0
Q ss_pred CccCCCCcccchhhhhhcccCCCCcccCceeeeccccccccc
Q 013731 345 QFSKPDSISNWLQCQEVLTNNDTNVCVEGTKCGKWRRAPFSE 386 (437)
Q Consensus 345 ~~~~~~~~~nWlqc~evl~~~~~~~~~~~~icgKWRraP~~~ 386 (437)
+.+..+.-++.+++.+||++ ...++++..|++||+..|..+
T Consensus 13 ~~~~~~~~~e~yeVE~Ild~-R~~~~g~~~YlVKWkGy~~~~ 53 (81)
T 4hae_A 13 NLYFQGASGDLYEVERIVDK-RKNKKGKWEYLIRWKGYGSTE 53 (81)
T ss_dssp CEEEECTTSCEEEEEEEEEE-EECTTSCEEEEEEETTCCGGG
T ss_pred cccccCCCCCEEEEEEEEEe-EECCCCeEEEEEEECCCCCCC
Confidence 45666778899999999997 444556778999999988753
No 120
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.46 E-value=7.5 Score=29.55 Aligned_cols=45 Identities=7% Similarity=0.176 Sum_probs=32.4
Q ss_pred cCCCCCCCCCCcccCCCCC--CCcchh-hhHHHhhhcccccccccccccccccc
Q 013731 144 TEGSDISNSDISRLEVLDE--DPSARE-FCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 144 ~~~dd~eeC~ic~~~~~~e--d~s~h~-fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
....+...|.||......- ..|.|. ||..|+.. ...||+.|....
T Consensus 10 ~~~~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~------~~~CP~CR~~i~ 57 (68)
T 2ea5_A 10 PSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKY------FQQCPMCRQFVQ 57 (68)
T ss_dssp CSCCCSSCCSSSSSSCCCCEETTTTBCCSCTTHHHH------CSSCTTTCCCCC
T ss_pred ccCCCCCCCCCcCcCCCCEEEECCCChhhhHHHHhc------CCCCCCCCcchh
Confidence 3455677899998876443 358899 99999863 267888877544
No 121
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=62.38 E-value=3.9 Score=28.81 Aligned_cols=46 Identities=17% Similarity=0.431 Sum_probs=30.9
Q ss_pred ccccccccCCCC-CCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 207 QSCKLCGKADNT-STMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 207 ~~C~vCg~~~~~-~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
..|.+|...-.. +....-..|...||..|+..-+.. .-.||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 567788766433 234444468999999999865543 3479999753
No 122
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=62.10 E-value=2.3 Score=37.00 Aligned_cols=46 Identities=13% Similarity=0.064 Sum_probs=32.4
Q ss_pred CCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSV 191 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~ 191 (437)
..++.-.|+||...+... -.|.|.||..||..|-... ...||+.+.
T Consensus 27 ~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~-~~~CP~Cr~ 74 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSG-PQNCAACVH 74 (141)
T ss_dssp GCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGS-CEECHHHHH
T ss_pred cCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcC-CCCCCCCCC
Confidence 345566799999887433 3699999999998874212 236777665
No 123
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=61.68 E-value=2.7 Score=31.56 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=30.8
Q ss_pred CCCCCCCCcccCCCCCC----Ccchh-hhHHHhhhcccccccccccccccc
Q 013731 147 SDISNSDISRLEVLDED----PSARE-FCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 147 dd~eeC~ic~~~~~~ed----~s~h~-fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
.+..+|.||.......- .+.|. ||..|+..+- .....||+.|..
T Consensus 6 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~--~~~~~CPiCR~~ 54 (64)
T 2vje_A 6 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLK--KRNKPCPVCRQP 54 (64)
T ss_dssp GGGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHH--HTTCCCTTTCCC
T ss_pred CCcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHH--HcCCcCCCcCcc
Confidence 35568999998764432 58898 8999997664 223678877754
No 124
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.41 E-value=1.5 Score=33.66 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=30.6
Q ss_pred CCCCCCCCCcccCCCCC--CCcchh-hhHHHhhhcccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--DPSARE-FCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d~s~h~-fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
..+..+|+||...+... ..|.|. ||..|+.. ...||+.+....
T Consensus 22 ~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~------~~~CP~Cr~~i~ 67 (75)
T 2ecg_A 22 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEA------VDKCPMCYTVIT 67 (75)
T ss_dssp HHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHHH------CSBCTTTCCBCC
T ss_pred CCCCCCCCcCCCCCCCEEEecCCCHHHHHHHhhC------CCCCccCCceec
Confidence 34455799999886443 368999 99999953 267888776543
No 125
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=57.21 E-value=4.2 Score=31.13 Aligned_cols=42 Identities=10% Similarity=0.091 Sum_probs=31.1
Q ss_pred CCCCCCCCcccCCCCC--CCcchh-hhHHHhhhcccccccccccccccccc
Q 013731 147 SDISNSDISRLEVLDE--DPSARE-FCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 147 dd~eeC~ic~~~~~~e--d~s~h~-fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
++...|+||...+... ..|.|. ||..|+..+ ..||+.+....
T Consensus 22 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~------~~CP~Cr~~i~ 66 (74)
T 4ic3_A 22 QEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV------DKCPMCYTVIT 66 (74)
T ss_dssp HHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC------SBCTTTCCBCS
T ss_pred ccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC------ccCCCcCcCcc
Confidence 3455799999876443 258899 999999776 57888876543
No 126
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.22 E-value=8.5 Score=30.37 Aligned_cols=48 Identities=6% Similarity=-0.002 Sum_probs=32.1
Q ss_pred CCCCCCCCCCcccCCCCCC---CcchhhhHHHhhhcccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDED---PSAREFCVSVLRSNGLLGAVGECSVRSVA 192 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~ed---~s~h~fCis~L~s~g~l~~v~~Cp~~~~t 192 (437)
=.+..++|.||...+...+ .|.|.|=..||..|=......+||+.+..
T Consensus 11 y~~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 11 YPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDY 61 (74)
T ss_dssp CSSSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSC
T ss_pred ccCCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCc
Confidence 4566789999999986544 56677777777766322222678877643
No 127
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.50 E-value=3.7 Score=32.55 Aligned_cols=50 Identities=22% Similarity=0.488 Sum_probs=30.2
Q ss_pred cccccccccCCCC-CCeEE-e--ccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNT-STMLL-C--DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~-~~LLl-C--D~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|....++ +.++. | .+.-..||..||..=|.. .+...||.|...-
T Consensus 15 ~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~ 68 (80)
T 2d8s_A 15 QDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEF 68 (80)
T ss_dssp SCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBC
T ss_pred CCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCee
Confidence 3678899765433 33432 2 222389999999853332 1234899997654
No 128
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=54.67 E-value=3.3 Score=32.94 Aligned_cols=29 Identities=21% Similarity=0.188 Sum_probs=22.9
Q ss_pred CCCCCCcccCCCCCC-----CcchhhhHHHhhhc
Q 013731 149 ISNSDISRLEVLDED-----PSAREFCVSVLRSN 177 (437)
Q Consensus 149 ~eeC~ic~~~~~~ed-----~s~h~fCis~L~s~ 177 (437)
.-.|+||...+..++ .|.|.||.+|++..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~ 38 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQY 38 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHH
Confidence 457999998875543 49999999999764
No 129
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=54.53 E-value=5 Score=30.35 Aligned_cols=48 Identities=21% Similarity=0.408 Sum_probs=31.7
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|...-.....+.--.|...||..|+..-+.. .-.||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 62 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSL 62 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCC
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCcc
Confidence 3678888766443333333358999999999855432 24799997654
No 130
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=51.14 E-value=5.3 Score=34.95 Aligned_cols=49 Identities=12% Similarity=0.142 Sum_probs=35.1
Q ss_pred CCCCCCCCCCcccCCCCC--CCcchhhhHHHhhhcccccccccccccccccc
Q 013731 145 EGSDISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
..++.-.|+||...+... -.+.|.||..||.+|-... ..+||+.+....
T Consensus 14 ~~~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~-~~~CP~Cr~~~~ 64 (170)
T 3hcs_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDA-GHKCPVDNEILL 64 (170)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHH-CSBCTTTCCBCC
T ss_pred CCCCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhC-CCCCCCCccCcc
Confidence 455666899999887433 3589999999998864222 248999876543
No 131
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.04 E-value=1.6 Score=33.16 Aligned_cols=48 Identities=23% Similarity=0.493 Sum_probs=32.8
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|...-.....+..-.|...||..|+..-+.. ...||.|+..-
T Consensus 23 ~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~ 70 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADS 70 (75)
T ss_dssp CCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCC
T ss_pred CCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcC
Confidence 3678889866544444455569999999999864432 23799997643
No 132
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=49.16 E-value=19 Score=29.23 Aligned_cols=46 Identities=13% Similarity=-0.082 Sum_probs=32.6
Q ss_pred CCCCCCCCCcccCCCCCC--Ccc-hhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDED--PSA-REFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~ed--~s~-h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
..+.-.||||+..+..+- .+. |.||-.+|..|= ....+||+.+...
T Consensus 19 ~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l--~~~~~cP~~~~~l 67 (98)
T 1wgm_A 19 ACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHL--LSDQTDPFNRSPL 67 (98)
T ss_dssp CCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHT--TTSCBCTTTCSBC
T ss_pred CcHhcCCcCccccccCCeECCCCCeEECHHHHHHHH--HhCCCCCCCCCCC
Confidence 334456999998875553 466 999999998873 3347888877643
No 133
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=47.88 E-value=3.8 Score=45.02 Aligned_cols=53 Identities=25% Similarity=0.602 Sum_probs=33.8
Q ss_pred ccchhhhhhcccCCCCcccCceeeecccccccccccC----CCcceeeeeecC-C--CCCCCCCCcccchHHH
Q 013731 353 SNWLQCQEVLTNNDTNVCVEGTKCGKWRRAPFSEVQT----DSWDCSCAILWD-P--LHSDCAVPQELETDQV 418 (437)
Q Consensus 353 ~nWlqc~evl~~~~~~~~~~~~icgKWRraP~~~vq~----~~w~c~c~~~wd-p--~h~dca~pqe~~t~~~ 418 (437)
+-|+||+.- . |||||++|=..-.| ..+-|.+-..=+ = ---.|.+|.++-..|+
T Consensus 91 ~~~~~c~~~----~---------c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (776)
T 4gut_A 91 PYWVQCTKP----E---------CRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPETSDHCSLPEDLRVLEV 150 (776)
T ss_dssp CCEEECCCT----T---------TCCEEECCTTCCCCHHHHHHCCTTCCCC-------CCGGGSCCCHHHHHT
T ss_pred cHhhhcCcc----c---------ccchhhCCCcCCCChhhhheeeccCccCcccccccCCCCCCCcccchhhc
Confidence 559999932 1 99999998543332 357787764220 0 1224999998777776
No 134
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=47.33 E-value=2.1 Score=31.80 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=31.5
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|...-.....+..-.|...||..|+..-+.. .-.||.|+..-
T Consensus 14 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 61 (69)
T 2kiz_A 14 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVDI 61 (69)
T ss_dssp CCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSBS
T ss_pred CCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCccc
Confidence 3678888765443333444569999999999754432 12599997654
No 135
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=46.91 E-value=1.5 Score=33.02 Aligned_cols=49 Identities=24% Similarity=0.500 Sum_probs=30.9
Q ss_pred cccccccccCCCCCCeEEe--ccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLC--DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlC--D~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...|.+|....++..++-| .+.-+.||..||..=+.. .+.+.|+.|...
T Consensus 6 ~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~ 56 (60)
T 1vyx_A 6 VPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVV 56 (60)
T ss_dssp CCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCB
T ss_pred CCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCe
Confidence 3678888766544444444 233348999999854432 245788888754
No 136
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.58 E-value=5.1 Score=31.20 Aligned_cols=30 Identities=23% Similarity=0.523 Sum_probs=22.1
Q ss_pred EeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 223 LCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 223 lCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
.--.|...||..|+..=|..- -.||.|+..
T Consensus 44 ~~~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~ 73 (81)
T 2ecl_A 44 VWGECNHSFHNCCMSLWVKQN----NRCPLCQQD 73 (81)
T ss_dssp EEETTSCEEEHHHHHHHTTTC----CBCTTTCCB
T ss_pred EeCCCCCccChHHHHHHHHhC----CCCCCcCCC
Confidence 334799999999998655543 279999765
No 137
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=45.43 E-value=8.5 Score=30.33 Aligned_cols=44 Identities=11% Similarity=-0.076 Sum_probs=32.2
Q ss_pred CCCCCCCcccCCCCC--CCcchhhhHHHhhhccccccccccccccccc
Q 013731 148 DISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+.-.|+||+..+... -.|.|.||-.+|..|- ....+||+.+...
T Consensus 13 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l--~~~~~cP~~~~~l 58 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHL--LNSPTDPFNRQML 58 (85)
T ss_dssp TTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHH--HHCSBCTTTCCBC
T ss_pred hheECcccCchhcCCeECCCCCEECHHHHHHHH--hcCCCCCCCcCCC
Confidence 344699999887544 2388999999998874 2347899877643
No 138
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.70 E-value=6.3 Score=31.14 Aligned_cols=46 Identities=17% Similarity=0.444 Sum_probs=32.2
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
..|.+|...-.. -+.|-.|...||..|+.-=+.... .=.||.|...
T Consensus 16 ~~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~ 61 (74)
T 2ct0_A 16 KICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDY 61 (74)
T ss_dssp CBCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSC
T ss_pred CcCcchhhHccc--CCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCc
Confidence 668888766543 356889999999999985544322 2368888754
No 139
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=44.25 E-value=3.9 Score=28.70 Aligned_cols=47 Identities=19% Similarity=0.436 Sum_probs=31.2
Q ss_pred cccccccccCC-CCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKAD-NTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~-~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...|.+|...- +.+.....-.|...||..|+..-+..- ..||.|...
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 36688887653 233445566789999999997543321 468888754
No 140
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=43.04 E-value=3.2 Score=32.93 Aligned_cols=47 Identities=17% Similarity=0.403 Sum_probs=31.3
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
...|.+|...-..+..+..-.|...||..|+..-+.. .-.||.|+..
T Consensus 40 ~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~ 86 (91)
T 2l0b_A 40 EMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCM 86 (91)
T ss_dssp CSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCB
T ss_pred CCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCcc
Confidence 3678888765443333433459999999999865443 2379999754
No 141
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=41.44 E-value=8.2 Score=39.42 Aligned_cols=51 Identities=22% Similarity=0.404 Sum_probs=31.8
Q ss_pred cccccccccCCCC---CCeEEec--cCCCCCCCcccCCCCCCCCCC-------CCcCccCcCC
Q 013731 206 IQSCKLCGKADNT---STMLLCD--YCDEAFHPSCCNPRIKILPTD-------NWLCQCCSNL 256 (437)
Q Consensus 206 ~~~C~vCg~~~~~---~~LLlCD--~Cd~ayH~~CL~PPL~~iP~g-------~W~Cp~C~~~ 256 (437)
...|.+|-.--.+ -....|+ .|...||..||..=+.+.+.+ -=-||.|...
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 3567888655443 2345698 899999999998432222211 0138888764
No 142
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=41.07 E-value=7.3 Score=36.97 Aligned_cols=46 Identities=17% Similarity=0.488 Sum_probs=33.2
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSN 255 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~ 255 (437)
...|.+|..---. -..|..|+..||..|+.--+.. .+.=-||.|..
T Consensus 180 i~~C~iC~~iv~~--g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSS--CEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCC
T ss_pred CCcCcchhhHHhC--CcccCccChHHHHHHHHHHHHh--CCCCCCCCCCC
Confidence 4779999877653 4779999999999999733222 23457888854
No 143
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=40.46 E-value=6.2 Score=33.40 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=27.3
Q ss_pred CCCcccCCC---CCCCcchhhhHHHhhhccccccccccccccc
Q 013731 152 SDISRLEVL---DEDPSAREFCVSVLRSNGLLGAVGECSVRSV 191 (437)
Q Consensus 152 C~ic~~~~~---~ed~s~h~fCis~L~s~g~l~~v~~Cp~~~~ 191 (437)
|+.|+++.. .=..|.|.||.+|...+..-. .++||..+.
T Consensus 4 C~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~-~k~Cp~C~~ 45 (101)
T 3vk6_A 4 CDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKG-DKMCPGCSD 45 (101)
T ss_dssp CTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTT-CCBCTTTCC
T ss_pred cCccCCCeEEEeeeccccccHHHHHHHHHHhcc-CCCCcCcCC
Confidence 888998872 224699999999998765222 266776554
No 144
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=40.14 E-value=11 Score=30.79 Aligned_cols=45 Identities=11% Similarity=-0.059 Sum_probs=32.6
Q ss_pred CCCCCCCCcccCCCCCC--CcchhhhHHHhhhccccccccccccccccc
Q 013731 147 SDISNSDISRLEVLDED--PSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 147 dd~eeC~ic~~~~~~ed--~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
-+.-.||||+..+..+- .|.|.||-.+|..|= ....+||+.+...
T Consensus 27 p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l--~~~~~cP~~~~~l 73 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHL--LNSPTDPFNRQTL 73 (100)
T ss_dssp STTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHT--TSCSBCSSSCCBC
T ss_pred cHhhCCcCccCcccCCeECCCCCEEchHHHHHHH--HcCCCCCCCCCCC
Confidence 33446999998875542 378999999998874 2347888877643
No 145
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=37.06 E-value=17 Score=33.38 Aligned_cols=47 Identities=13% Similarity=-0.100 Sum_probs=32.0
Q ss_pred CCCCCCCCCcccCCCCCC--CcchhhhHHHhhhccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDED--PSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~ed--~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
.-+.-.|+||...+..+- .|.|.||-.||..|=. .+..+||+.+...
T Consensus 205 ~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~-~~~~~cP~~~~~~ 253 (281)
T 2c2l_A 205 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQ-RVGHFNPVTRSPL 253 (281)
T ss_dssp CCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHH-HTCSSCTTTCCCC
T ss_pred CCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHH-HCCCCCcCCCCCC
Confidence 334456999998875552 4899999999987632 1123488876644
No 146
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=36.89 E-value=8.4 Score=28.65 Aligned_cols=44 Identities=11% Similarity=0.091 Sum_probs=29.5
Q ss_pred CCCCCCCcccCCCCC--C--Ccchh-hhHHHhhhccccccccccccccccc
Q 013731 148 DISNSDISRLEVLDE--D--PSARE-FCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--d--~s~h~-fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
...+|.||....... . .+.|. ||..|+..+- ...+.||+.|...
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~--~~~~~CPiCR~~i 54 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLK--KAGASCPICKKEI 54 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHH--HTTCBCTTTCCBC
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHH--HhCCcCCCcCchh
Confidence 345799999865433 1 58898 9999987643 2225788777643
No 147
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=36.74 E-value=58 Score=26.89 Aligned_cols=55 Identities=13% Similarity=0.119 Sum_probs=34.4
Q ss_pred CCCCCCCcccCC----CCCCCcchhhhHHHhhhccccccccccccc-cccccccCCCccccc
Q 013731 148 DISNSDISRLEV----LDEDPSAREFCVSVLRSNGLLGAVGECSVR-SVASGEVSGTGHEIS 204 (437)
Q Consensus 148 d~eeC~ic~~~~----~~ed~s~h~fCis~L~s~g~l~~v~~Cp~~-~~t~~~~~~w~c~~c 204 (437)
..+.|.+|..-. ...-+|.+-|-..||+..|++.+. =... ...-....+|.|.+|
T Consensus 14 ~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~--~a~e~~l~A~T~~GWSC~~C 73 (89)
T 1wil_A 14 NDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGD--SAAEVTEMAHTETGWSCHYC 73 (89)
T ss_dssp CSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCC--CCCSCSCCCSSSSSCCCTTT
T ss_pred CCcccCccccccccceeccccccccccHhhcccccccccH--HHHHHHHccCCCCCcccccc
Confidence 456788888443 334578888888999988877631 1111 111224669999877
No 148
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=35.43 E-value=22 Score=26.49 Aligned_cols=48 Identities=17% Similarity=0.310 Sum_probs=32.3
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCC---CCCCCcCccCcCCC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKIL---PTDNWLCQCCSNLN 257 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~i---P~g~W~Cp~C~~~~ 257 (437)
..|.+|...-....++ .|...||..|+..-+... ..+.-.||.|...-
T Consensus 13 ~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 13 VTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred CCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 5688887665433333 688899999998655542 12357899998754
No 149
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=35.21 E-value=12 Score=37.46 Aligned_cols=43 Identities=9% Similarity=0.074 Sum_probs=31.9
Q ss_pred CCCCCCCCCcccCCCCC--CCcchh-hhHHHhhhcccccccccccccccccc
Q 013731 146 GSDISNSDISRLEVLDE--DPSARE-FCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~e--d~s~h~-fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
..+...|+||...+... ..|.|. ||..|+..+ ..||+.|....
T Consensus 292 l~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~------~~CP~CR~~i~ 337 (345)
T 3t6p_A 292 LQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSL------RKCPICRGIIK 337 (345)
T ss_dssp HHTTCBCTTTSSSBCCEEEETTCCEEECTTTGGGC------SBCTTTCCBCC
T ss_pred CcCCCCCCccCCcCCceEEcCCCChhHhHHHHhcC------CcCCCCCCCcc
Confidence 34556799999887544 358999 999999765 57888776543
No 150
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.01 E-value=4.6 Score=30.29 Aligned_cols=49 Identities=20% Similarity=0.364 Sum_probs=31.5
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLNS 258 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~~ 258 (437)
...|.+|...-.....+.--.|...||..|+..-+..- -.||.|+..-.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~----~~CP~Cr~~~~ 63 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR----KVCPLCNMPVL 63 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC----SBCTTTCCBCS
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC----CcCCCcCcccc
Confidence 36788887765433333222589899999997544321 27999976543
No 151
>2rsn_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, RNA-mediated gene SIL chromosomal protein, methylation; HET: M3L; NMR {Schizosaccharomyces pombe}
Probab=34.36 E-value=9.4 Score=30.15 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=24.8
Q ss_pred ccchhhhhhcccCCCCcccCceeeeccccccccc
Q 013731 353 SNWLQCQEVLTNNDTNVCVEGTKCGKWRRAPFSE 386 (437)
Q Consensus 353 ~nWlqc~evl~~~~~~~~~~~~icgKWRraP~~~ 386 (437)
.+.+.+.+||++ ...+.++..|++||+..|..+
T Consensus 19 ~e~yeVE~Il~~-r~~~~g~~~YlVkWkGy~~~~ 51 (75)
T 2rsn_A 19 ADVYEVEDILAD-RVNKNGINEYYIKWAGYDWYD 51 (75)
T ss_dssp GGCEEEEEEEEE-EECSSSCEEEEEEEESSCGGG
T ss_pred CceEEEEEEEEE-EEcCCCcEEEEEEECCCCCcC
Confidence 345688899987 444556778999999988663
No 152
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=34.14 E-value=21 Score=36.49 Aligned_cols=32 Identities=13% Similarity=0.010 Sum_probs=24.7
Q ss_pred CCCCCCCCCcccCCCC-C---------CCcchhhhHHHhhhc
Q 013731 146 GSDISNSDISRLEVLD-E---------DPSAREFCVSVLRSN 177 (437)
Q Consensus 146 ~dd~eeC~ic~~~~~~-e---------d~s~h~fCis~L~s~ 177 (437)
.+..++|+||...+.. + ..|.|.|-..||.+|
T Consensus 305 ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kW 346 (381)
T 3k1l_B 305 DNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEW 346 (381)
T ss_dssp CCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHH
T ss_pred ccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHH
Confidence 4577889999988643 1 157889999999887
No 153
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=34.00 E-value=10 Score=30.78 Aligned_cols=30 Identities=30% Similarity=0.799 Sum_probs=22.6
Q ss_pred ccccccccCCCCCCeEEecc--CCCCCCCcccC
Q 013731 207 QSCKLCGKADNTSTMLLCDY--CDEAFHPSCCN 237 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~--Cd~ayH~~CL~ 237 (437)
..|.+|++.+ .+.-+.|.. |..+||..|-.
T Consensus 18 l~C~iC~~~~-~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 18 LTCYLCKQKG-VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCBTTTTBCC-SSCEEECSCTTTCCEEEHHHHH
T ss_pred CCCcCCCCCC-CcEeEecCCCCCCCcCcHHHHH
Confidence 5688887542 237788975 99999999954
No 154
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=33.44 E-value=6.7 Score=31.84 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=23.6
Q ss_pred EeccCCCCCCCcccCCCCCCC-CCCCCcCccCcCCC
Q 013731 223 LCDYCDEAFHPSCCNPRIKIL-PTDNWLCQCCSNLN 257 (437)
Q Consensus 223 lCD~Cd~ayH~~CL~PPL~~i-P~g~W~Cp~C~~~~ 257 (437)
.--.|...||..|+..-+..- ....-.||.|+..-
T Consensus 57 ~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 57 RLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp EESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred ecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCcc
Confidence 355789999999998644211 12345799998654
No 155
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=33.27 E-value=16 Score=29.65 Aligned_cols=46 Identities=15% Similarity=0.429 Sum_probs=31.7
Q ss_pred cccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 206 IQSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 206 ~~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
...|.+|...-.. ...+ .|...||..|+..-+. .+.-.||.|...-
T Consensus 15 ~~~C~iC~~~~~~-p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 15 ECQCGICMEILVE-PVTL--PCNHTLCKPCFQSTVE---KASLCCPFCRRRV 60 (115)
T ss_dssp HHBCTTTCSBCSS-CEEC--TTSCEECHHHHCCCCC---TTTSBCTTTCCBC
T ss_pred CCCCccCCcccCc-eeEc--CCCCHHhHHHHHHHHh---HCcCCCCCCCccc
Confidence 3668888765433 2333 7899999999985543 3457899998764
No 156
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=31.09 E-value=54 Score=26.78 Aligned_cols=35 Identities=23% Similarity=0.729 Sum_probs=27.7
Q ss_pred CCeEEeccCCC-CCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 219 STMLLCDYCDE-AFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 219 ~~LLlCD~Cd~-ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
-.||+|..|.. +-|..|.. |. -....|.|..|..-
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~--l~-~~~~~weC~~C~~v 79 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSS--LR-PNSKKWECNECLPA 79 (85)
T ss_dssp TBCEECSSSCCCEECSGGGT--CC-TTCSCCCCTTTSCC
T ss_pred EEEEeCcccCCchhHHHHhC--Cc-CCCCCEECCcCccc
Confidence 47999999975 78999998 43 24568999999853
No 157
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=28.13 E-value=18 Score=28.20 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=29.2
Q ss_pred CCCCCCCcccCCCCC--CCcchh-hhHHHhhhcccccccccccccccccc
Q 013731 148 DISNSDISRLEVLDE--DPSARE-FCVSVLRSNGLLGAVGECSVRSVASG 194 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--d~s~h~-fCis~L~s~g~l~~v~~Cp~~~~t~~ 194 (437)
+...|+||....... ..|.|. ||..|+..+ ..||+.|....
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~------~~CP~Cr~~i~ 60 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCGHTVCCESCAAQL------QSCPVCRSRVE 60 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTCBCCBCHHHHTTC------SBCTTTCCBCC
T ss_pred CCCEeEEeCcccCcEEEECCCCHHHHHHHHHhc------CcCCCCCchhh
Confidence 445799998776443 358898 999998654 37888776543
No 158
>2dnt_A Chromodomain protein, Y chromosome-like, isoform B; histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.13.2
Probab=28.07 E-value=17 Score=28.62 Aligned_cols=30 Identities=7% Similarity=0.122 Sum_probs=21.8
Q ss_pred chhhhhhcccCCCCcccCceeeecccccccc
Q 013731 355 WLQCQEVLTNNDTNVCVEGTKCGKWRRAPFS 385 (437)
Q Consensus 355 Wlqc~evl~~~~~~~~~~~~icgKWRraP~~ 385 (437)
-+.+.+||++ ...+.+...|++||+..|+.
T Consensus 13 ~y~VE~Il~~-r~~~~g~~~YlVKWkGy~~~ 42 (78)
T 2dnt_A 13 LYEVERIVDK-RKNKKGKTEYLVRWKGYDSE 42 (78)
T ss_dssp SCCCCCEEEE-EECTTSCEEEEECBTTBCGG
T ss_pred eEEEEEEEEE-EEcCCCcEEEEEEECCCCcc
Confidence 4567788887 32234568999999998874
No 159
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=27.28 E-value=17 Score=39.55 Aligned_cols=36 Identities=14% Similarity=0.288 Sum_probs=27.3
Q ss_pred cccchhhhhhcccCCC---CcccCceeeecccccccccc
Q 013731 352 ISNWLQCQEVLTNNDT---NVCVEGTKCGKWRRAPFSEV 387 (437)
Q Consensus 352 ~~nWlqc~evl~~~~~---~~~~~~~icgKWRraP~~~v 387 (437)
..+|++..|||.+... +..+...|+.||+.+||++.
T Consensus 142 ~~~~~~veRii~~~~~~~~~~~~~~~yLvKW~~L~y~~~ 180 (800)
T 3mwy_W 142 FEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEA 180 (800)
T ss_dssp HTTTTCEEEECCCCCEECTTSCEECBCCEEETTSCSTTC
T ss_pred cccccceeEEEeecccccCCCCCceEEEEEecCCCcccc
Confidence 4779999999997321 12345789999999999864
No 160
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=27.14 E-value=23 Score=23.71 Aligned_cols=13 Identities=38% Similarity=1.275 Sum_probs=10.1
Q ss_pred CCCCCcCccCcCC
Q 013731 244 PTDNWLCQCCSNL 256 (437)
Q Consensus 244 P~g~W~Cp~C~~~ 256 (437)
-.|+|.|+.|...
T Consensus 3 ~~gDW~C~~C~~~ 15 (33)
T 2k1p_A 3 SANDWQCKTCSNV 15 (33)
T ss_dssp SSSSCBCSSSCCB
T ss_pred CCCCcccCCCCCc
Confidence 4689999998543
No 161
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=24.82 E-value=70 Score=26.11 Aligned_cols=49 Identities=4% Similarity=0.009 Sum_probs=30.5
Q ss_pred CCCCCCCCCCcccCCCCCCCcchhhhHHHhhhccccccccccccccccccccCCCccccc
Q 013731 145 EGSDISNSDISRLEVLDEDPSAREFCVSVLRSNGLLGAVGECSVRSVASGEVSGTGHEIS 204 (437)
Q Consensus 145 ~~dd~eeC~ic~~~~~~ed~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~~~~~~w~c~~c 204 (437)
..++...|.+|.... ...+|..|-+. +. -.|..+.++......|.|..|
T Consensus 21 ~d~n~~~C~vC~~~g------~LL~CD~C~~~---fH--~~Cl~PpL~~~P~g~W~C~~C 69 (88)
T 1fp0_A 21 LDDSATICRVCQKPG------DLVMCNQCEFC---FH--LDCHLPALQDVPGEEWSCSLC 69 (88)
T ss_dssp SSSSSSCCSSSCSSS------CCEECTTSSCE---EC--TTSSSTTCCCCCSSSCCCCSC
T ss_pred cCCCCCcCcCcCCCC------CEEECCCCCCc---ee--cccCCCCCCCCcCCCcCCccc
Confidence 345556799998542 24556555432 22 567766666555678999877
No 162
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=23.93 E-value=28 Score=31.72 Aligned_cols=45 Identities=13% Similarity=-0.067 Sum_probs=30.8
Q ss_pred CCCCCCCcccCCCCC--CCcchhhhHHHhhhccccccccccccccccc
Q 013731 148 DISNSDISRLEVLDE--DPSAREFCVSVLRSNGLLGAVGECSVRSVAS 193 (437)
Q Consensus 148 d~eeC~ic~~~~~~e--d~s~h~fCis~L~s~g~l~~v~~Cp~~~~t~ 193 (437)
+.--||||+..+..+ -.|.|.||-.+|..|-.-.+ .+||+.+...
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~-~tcP~t~~~l 151 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG-HFDPVTRSPL 151 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC-SBCTTTCCBC
T ss_pred HhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC-CCCCCCcCCC
Confidence 344699999887544 24789999999987742221 3688876543
No 163
>1g6z_A CLR4 protein; transferase; NMR {Schizosaccharomyces pombe} SCOP: b.34.13.2
Probab=23.31 E-value=25 Score=27.06 Aligned_cols=28 Identities=4% Similarity=0.028 Sum_probs=19.5
Q ss_pred hhhhhcccCCCCcccCce-eeecccccccc
Q 013731 357 QCQEVLTNNDTNVCVEGT-KCGKWRRAPFS 385 (437)
Q Consensus 357 qc~evl~~~~~~~~~~~~-icgKWRraP~~ 385 (437)
.+.+||++ ...+.+... |++||+..|..
T Consensus 10 ~VE~Il~~-r~~~~g~~~~YlVKWkGy~~~ 38 (70)
T 1g6z_A 10 EVERIVDE-KLDRNGAVKLYRIRWLNYSSR 38 (70)
T ss_dssp CCCSCSEE-ECCTTSSCCEEEECCTTTTSS
T ss_pred EEEEEEEE-EEcCCCcEEEEEEEECCCCCC
Confidence 67788887 332325566 99999987764
No 164
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=23.01 E-value=18 Score=24.07 Aligned_cols=11 Identities=36% Similarity=1.177 Sum_probs=9.0
Q ss_pred CCCCcCccCcC
Q 013731 245 TDNWLCQCCSN 255 (437)
Q Consensus 245 ~g~W~Cp~C~~ 255 (437)
.|+|.|+.|..
T Consensus 3 ~gDW~C~~C~~ 13 (32)
T 2lk0_A 3 FEDWLCNKCCL 13 (32)
T ss_dssp CSEEECTTTCC
T ss_pred CCCCCcCcCcC
Confidence 48999999854
No 165
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=22.33 E-value=20 Score=28.61 Aligned_cols=47 Identities=19% Similarity=0.336 Sum_probs=30.1
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccCCCCCCCCCCCCcCccCcCCC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCNPRIKILPTDNWLCQCCSNLN 257 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~~ 257 (437)
..|.+|...-....++ .|...||..|+..-+..- .+...||.|...-
T Consensus 22 ~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 22 LECPICLELIKEPVST---KCDHIFCKFCMLKLLNQK-KGPSQCPLCKNDI 68 (112)
T ss_dssp TSCSSSCCCCSSCCBC---TTSCCCCSHHHHHHHHSS-SSSCCCTTTSCCC
T ss_pred CCCcccChhhcCeEEC---CCCCHHHHHHHHHHHHhC-CCCCCCcCCCCcC
Confidence 4677887654333332 688899999987544322 2446899997643
No 166
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=21.56 E-value=20 Score=30.48 Aligned_cols=28 Identities=25% Similarity=0.514 Sum_probs=0.0
Q ss_pred ccCCCCCCCcccCCCCCCCCCCCCcCccCcCC
Q 013731 225 DYCDEAFHPSCCNPRIKILPTDNWLCQCCSNL 256 (437)
Q Consensus 225 D~Cd~ayH~~CL~PPL~~iP~g~W~Cp~C~~~ 256 (437)
-.|...||..|+.+=|.. .-.||-|+..
T Consensus 82 ~~C~H~FH~~CI~~Wl~~----~~~CP~Cr~~ 109 (117)
T 4a0k_B 82 GVCNHAFHFHCISRWLKT----RQVCPLDNRE 109 (117)
T ss_dssp --------------------------------
T ss_pred CCcCceEcHHHHHHHHHc----CCcCCCCCCe
Confidence 368999999999975544 2369999764
No 167
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=21.20 E-value=27 Score=34.04 Aligned_cols=42 Identities=7% Similarity=-0.137 Sum_probs=28.7
Q ss_pred CCCCCCCCcccCCCCCC---CcchhhhHHHhhhcccccccccccc
Q 013731 147 SDISNSDISRLEVLDED---PSAREFCVSVLRSNGLLGAVGECSV 188 (437)
Q Consensus 147 dd~eeC~ic~~~~~~ed---~s~h~fCis~L~s~g~l~~v~~Cp~ 188 (437)
...-.||||+..+..+- .|.|.||-.||.++-.-....+||+
T Consensus 179 ~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPv 223 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQ 223 (267)
T ss_dssp BCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSG
T ss_pred ceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCc
Confidence 33446999999986653 4799999999987632111245666
No 168
>1x3p_A Cpsrp43; chromo-2 domain, chloroplasts, LHCP, protein translocation, unknown function; NMR {Arabidopsis thaliana} SCOP: b.34.13.2
Probab=20.70 E-value=46 Score=24.50 Aligned_cols=23 Identities=13% Similarity=0.133 Sum_probs=15.3
Q ss_pred hhhhcccCCCCcccCc-eeeecccc
Q 013731 358 CQEVLTNNDTNVCVEG-TKCGKWRR 381 (437)
Q Consensus 358 c~evl~~~~~~~~~~~-~icgKWRr 381 (437)
..+||++ ...+.+.. .|++||+.
T Consensus 3 VE~Ild~-r~~~~g~~~~YlVKWkg 26 (54)
T 1x3p_A 3 AESVIGK-RVGDDGKTIEYLVKWTD 26 (54)
T ss_dssp SSCCCCB-SSCSSSCCCCBCCCCSS
T ss_pred EEEEEEE-EEcCCCcEEEEEEEECC
Confidence 3467776 33333566 89999996
No 169
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=20.65 E-value=53 Score=23.13 Aligned_cols=29 Identities=28% Similarity=0.648 Sum_probs=23.7
Q ss_pred ccccccccCCCCCCeEEeccCCCCCCCcccC
Q 013731 207 QSCKLCGKADNTSTMLLCDYCDEAFHPSCCN 237 (437)
Q Consensus 207 ~~C~vCg~~~~~~~LLlCD~Cd~ayH~~CL~ 237 (437)
..|..|++.-- .-+.|..|....|-.|..
T Consensus 15 t~C~~C~~~l~--qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 15 AFCDICQKFLL--NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp EECTTSSSEEC--SEEECTTTTCCBCSTTSS
T ss_pred cCCCCcccccc--cCCEeCCCCCeEChhHHh
Confidence 66778876543 678999999999999987
Done!