Query 013733
Match_columns 437
No_of_seqs 282 out of 1615
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 16:06:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013733.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013733hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t58_A Sulfhydryl oxidase 1; o 100.0 3.9E-71 1.3E-75 587.6 20.0 336 2-372 46-514 (519)
2 3qcp_A QSOX from trypanosoma b 100.0 3.7E-71 1.3E-75 578.9 14.0 344 2-380 58-429 (470)
3 3llk_A Sulfhydryl oxidase 1; d 100.0 3.4E-69 1.2E-73 523.3 9.7 235 115-372 8-256 (261)
4 2hj3_A Sulfhydryl oxidase ERV1 99.9 3.5E-28 1.2E-32 212.4 6.9 106 229-335 9-117 (125)
5 1jr8_A ERV2 protein, mitochond 99.9 7.4E-28 2.5E-32 208.1 8.2 92 231-322 9-103 (117)
6 3gwn_A Probable FAD-linked sul 99.9 7.4E-26 2.5E-30 194.8 8.4 80 234-313 10-97 (114)
7 3gwl_A P14, FAD-linked sulfhyd 99.9 1.6E-25 5.6E-30 190.3 9.5 86 235-320 9-97 (106)
8 4e0h_A Mitochondrial FAD-linke 99.9 3.8E-24 1.3E-28 181.9 9.9 83 236-318 10-95 (106)
9 3u5s_A FAD-linked sulfhydryl o 99.9 2.2E-23 7.5E-28 182.3 9.9 88 235-322 25-115 (126)
10 4e0i_A Mitochondrial FAD-linke 99.9 1.2E-21 4.2E-26 182.0 9.8 91 228-318 85-178 (189)
11 3td7_A FAD-linked sulfhydryl o 99.7 8.7E-18 3E-22 163.0 8.0 78 236-313 46-131 (295)
12 3ga4_A Dolichyl-diphosphooligo 99.0 3.6E-10 1.2E-14 104.1 7.5 97 2-103 60-160 (178)
13 3h79_A Thioredoxin-like protei 98.9 2.3E-09 8E-14 90.9 6.8 78 2-94 49-126 (127)
14 2c0g_A ERP29 homolog, windbeut 98.8 3.7E-09 1.3E-13 102.1 7.3 78 4-98 49-134 (248)
15 3us3_A Calsequestrin-1; calciu 98.7 7.4E-09 2.5E-13 104.5 5.9 70 6-97 56-125 (367)
16 2qc7_A ERP31, ERP28, endoplasm 98.7 2.2E-08 7.5E-13 96.2 7.0 76 4-95 38-118 (240)
17 1sji_A Calsequestrin 2, calseq 98.7 1.7E-08 5.7E-13 100.7 5.9 73 2-96 43-122 (350)
18 2r2j_A Thioredoxin domain-cont 98.6 3.3E-08 1.1E-12 99.9 6.3 80 2-97 38-118 (382)
19 2b5e_A Protein disulfide-isome 98.6 4E-08 1.4E-12 102.5 6.7 77 2-97 47-123 (504)
20 3zzx_A Thioredoxin; oxidoreduc 98.6 4.7E-08 1.6E-12 81.5 5.4 69 2-94 36-104 (105)
21 3f8u_A Protein disulfide-isome 98.6 3.7E-08 1.3E-12 101.9 5.8 75 2-98 37-111 (481)
22 3ed3_A Protein disulfide-isome 98.6 5.6E-08 1.9E-12 95.6 6.5 88 2-97 51-143 (298)
23 2ywm_A Glutaredoxin-like prote 98.5 4.1E-08 1.4E-12 91.4 4.3 75 2-96 41-115 (229)
24 1mek_A Protein disulfide isome 98.5 1.3E-07 4.5E-12 77.7 6.4 79 2-97 40-118 (120)
25 3idv_A Protein disulfide-isome 98.5 1.1E-07 3.9E-12 88.3 6.6 77 2-98 163-239 (241)
26 2es7_A Q8ZP25_salty, putative 98.5 6.3E-08 2.2E-12 85.3 4.4 74 2-98 52-127 (142)
27 2dj1_A Protein disulfide-isome 98.5 2.2E-07 7.4E-12 79.4 7.4 80 2-101 50-129 (140)
28 3uvt_A Thioredoxin domain-cont 98.5 1.2E-07 4E-12 77.3 5.4 74 2-94 37-110 (111)
29 2dj3_A Protein disulfide-isome 98.5 3.6E-07 1.2E-11 77.3 7.8 80 2-99 41-121 (133)
30 2dml_A Protein disulfide-isome 98.4 3E-07 1E-11 77.5 6.7 74 2-96 51-124 (130)
31 3gnj_A Thioredoxin domain prot 98.4 1.9E-07 6.3E-12 76.2 5.1 73 2-96 38-110 (111)
32 1x5d_A Protein disulfide-isome 98.4 1.8E-07 6.3E-12 78.8 4.9 78 2-97 41-118 (133)
33 2ppt_A Thioredoxin-2; thiredox 98.4 2.2E-07 7.7E-12 82.3 5.6 74 2-97 80-153 (155)
34 2voc_A Thioredoxin; electron t 98.4 3.8E-07 1.3E-11 75.4 6.6 76 2-99 33-108 (112)
35 3q6o_A Sulfhydryl oxidase 1; p 98.4 3E-07 1E-11 86.8 6.8 85 2-99 46-130 (244)
36 3apo_A DNAJ homolog subfamily 98.4 2.3E-07 7.9E-12 101.9 6.5 75 2-98 149-223 (780)
37 3p2a_A Thioredoxin 2, putative 98.4 3.3E-07 1.1E-11 79.5 5.8 74 2-97 71-144 (148)
38 1x5e_A Thioredoxin domain cont 98.4 3.1E-07 1.1E-11 77.2 5.3 74 2-97 38-111 (126)
39 2trx_A Thioredoxin; electron t 98.4 4.7E-07 1.6E-11 73.5 5.8 72 2-95 36-107 (108)
40 2qgv_A Hydrogenase-1 operon pr 98.4 1E-07 3.4E-12 84.5 1.9 72 2-95 52-124 (140)
41 3uem_A Protein disulfide-isome 98.3 6E-07 2E-11 89.3 7.5 75 2-96 283-357 (361)
42 1oaz_A Thioredoxin 1; immune s 98.3 2.4E-07 8.1E-12 78.7 3.9 72 2-95 51-122 (123)
43 3die_A Thioredoxin, TRX; elect 98.3 4.5E-07 1.5E-11 73.1 5.3 72 2-95 35-106 (106)
44 3idv_A Protein disulfide-isome 98.3 5.9E-07 2E-11 83.4 6.5 77 2-98 48-124 (241)
45 3tco_A Thioredoxin (TRXA-1); d 98.3 5.6E-07 1.9E-11 72.7 5.5 72 2-95 37-108 (109)
46 1thx_A Thioredoxin, thioredoxi 98.3 6.2E-07 2.1E-11 73.3 5.6 73 2-96 41-113 (115)
47 2qsi_A Putative hydrogenase ex 98.3 2.6E-07 8.9E-12 81.5 3.5 72 2-95 51-122 (137)
48 3apq_A DNAJ homolog subfamily 98.3 7.4E-07 2.5E-11 82.3 6.7 74 2-97 130-203 (210)
49 2o8v_B Thioredoxin 1; disulfid 98.3 7.8E-07 2.7E-11 75.9 6.3 72 2-95 56-127 (128)
50 2i4a_A Thioredoxin; acidophIle 98.3 6.9E-07 2.4E-11 72.1 5.6 71 2-94 36-106 (107)
51 4euy_A Uncharacterized protein 98.3 5.8E-07 2E-11 73.3 4.8 71 2-95 34-104 (105)
52 3hz4_A Thioredoxin; NYSGXRC, P 98.3 3.9E-07 1.3E-11 78.7 3.9 73 2-96 40-112 (140)
53 2yzu_A Thioredoxin; redox prot 98.3 7.2E-07 2.4E-11 71.9 5.2 74 2-97 34-107 (109)
54 3hxs_A Thioredoxin, TRXP; elec 98.3 9.6E-07 3.3E-11 75.5 6.2 73 2-96 67-139 (141)
55 2djj_A PDI, protein disulfide- 98.3 2.1E-06 7.3E-11 71.1 8.1 78 2-97 41-118 (121)
56 3ul3_B Thioredoxin, thioredoxi 98.3 5.9E-07 2E-11 76.1 4.4 70 2-93 58-127 (128)
57 2l5l_A Thioredoxin; structural 98.2 1.6E-06 5.5E-11 74.3 7.0 78 2-101 54-131 (136)
58 3qfa_C Thioredoxin; protein-pr 98.2 9.2E-07 3.1E-11 73.9 5.1 70 2-95 47-116 (116)
59 3apo_A DNAJ homolog subfamily 98.2 1.3E-06 4.3E-11 96.0 7.3 77 2-96 579-656 (780)
60 2e0q_A Thioredoxin; electron t 98.2 1.3E-06 4.3E-11 69.7 5.4 72 2-96 32-103 (104)
61 3f8u_A Protein disulfide-isome 98.2 2.4E-06 8.4E-11 88.2 8.9 83 2-103 386-468 (481)
62 1w4v_A Thioredoxin, mitochondr 98.2 1.3E-06 4.4E-11 73.0 5.5 73 2-96 47-119 (119)
63 3aps_A DNAJ homolog subfamily 98.2 7.4E-07 2.5E-11 74.2 3.9 73 2-96 37-113 (122)
64 1nsw_A Thioredoxin, TRX; therm 98.2 8.8E-07 3E-11 71.5 4.3 72 2-95 33-104 (105)
65 3m9j_A Thioredoxin; oxidoreduc 98.2 1.4E-06 4.9E-11 70.1 5.4 70 2-95 36-105 (105)
66 1t00_A Thioredoxin, TRX; redox 98.2 1.3E-06 4.3E-11 71.5 5.1 73 2-96 39-111 (112)
67 1v98_A Thioredoxin; oxidoreduc 98.2 1.5E-06 5.2E-11 74.6 5.8 73 2-96 66-138 (140)
68 2i1u_A Thioredoxin, TRX, MPT46 98.2 9.5E-07 3.3E-11 73.1 3.8 73 2-96 46-118 (121)
69 1fb6_A Thioredoxin M; electron 98.2 1.7E-06 5.8E-11 69.5 5.2 72 2-95 34-105 (105)
70 1dby_A Chloroplast thioredoxin 98.2 1.8E-06 6.3E-11 69.8 5.4 72 2-95 35-106 (107)
71 1gh2_A Thioredoxin-like protei 98.1 2.1E-06 7E-11 69.9 5.3 71 2-96 37-107 (107)
72 3qou_A Protein YBBN; thioredox 98.1 2.9E-06 1E-10 81.4 6.9 72 2-95 42-113 (287)
73 1xwb_A Thioredoxin; dimerizati 98.1 2.8E-06 9.7E-11 68.3 5.5 70 2-94 36-105 (106)
74 1ep7_A Thioredoxin CH1, H-type 98.1 2.4E-06 8.2E-11 69.7 4.7 72 2-96 40-111 (112)
75 1r26_A Thioredoxin; redox-acti 98.1 3.1E-06 1E-10 72.1 5.3 71 2-96 53-123 (125)
76 3dxb_A Thioredoxin N-terminall 98.1 4.7E-06 1.6E-10 77.7 6.8 75 2-98 46-120 (222)
77 2vlu_A Thioredoxin, thioredoxi 98.1 3.7E-06 1.3E-10 69.9 5.4 71 2-96 50-120 (122)
78 1fo5_A Thioredoxin; disulfide 98.0 1.1E-05 3.6E-10 62.4 7.1 68 2-95 18-85 (85)
79 1a8l_A Protein disulfide oxido 98.0 3.3E-06 1.1E-10 77.9 4.9 76 2-95 150-225 (226)
80 3f3q_A Thioredoxin-1; His TAG, 98.0 5.3E-06 1.8E-10 68.3 5.3 69 2-94 40-108 (109)
81 2l57_A Uncharacterized protein 98.0 8.3E-06 2.9E-10 68.4 6.2 77 2-99 42-120 (126)
82 2wz9_A Glutaredoxin-3; protein 98.0 8.8E-06 3E-10 71.2 6.5 75 2-100 48-122 (153)
83 3d6i_A Monothiol glutaredoxin- 98.0 4.7E-06 1.6E-10 68.2 4.4 73 2-96 37-109 (112)
84 1nho_A Probable thioredoxin; b 98.0 1.3E-05 4.4E-10 62.0 6.6 68 2-95 17-84 (85)
85 1syr_A Thioredoxin; SGPP, stru 97.9 7.3E-06 2.5E-10 67.4 5.0 70 2-95 42-111 (112)
86 2dj0_A Thioredoxin-related tra 97.9 1.2E-06 4.2E-11 75.0 -0.0 50 2-59 42-97 (137)
87 2vim_A Thioredoxin, TRX; thior 97.9 9.7E-06 3.3E-10 64.9 5.3 70 2-95 35-104 (104)
88 2l6c_A Thioredoxin; oxidoreduc 97.9 5E-06 1.7E-10 68.5 3.6 73 2-97 35-107 (110)
89 2xc2_A Thioredoxinn; oxidoredu 97.9 7.9E-06 2.7E-10 67.6 4.6 69 2-95 49-117 (117)
90 3gix_A Thioredoxin-like protei 97.9 9.2E-06 3.1E-10 71.4 5.1 78 2-95 39-120 (149)
91 2pu9_C TRX-F, thioredoxin F-ty 97.9 1.1E-05 3.6E-10 66.1 5.0 71 2-95 40-110 (111)
92 2djk_A PDI, protein disulfide- 97.9 1.9E-05 6.5E-10 67.7 6.8 75 2-96 38-115 (133)
93 2oe3_A Thioredoxin-3; electron 97.9 1.2E-05 4.1E-10 67.0 5.2 68 2-93 46-113 (114)
94 1xfl_A Thioredoxin H1; AT3G510 97.8 1.6E-05 5.6E-10 67.1 5.5 70 2-95 54-123 (124)
95 2b5e_A Protein disulfide-isome 97.8 1.8E-05 6E-10 82.4 7.0 78 2-99 392-470 (504)
96 1qgv_A Spliceosomal protein U5 97.8 2.4E-05 8.2E-10 68.1 6.7 79 2-96 39-121 (142)
97 2yj7_A LPBCA thioredoxin; oxid 97.0 2.3E-06 7.9E-11 68.4 0.0 71 2-94 35-105 (106)
98 2j23_A Thioredoxin; immune pro 97.8 6.2E-06 2.1E-10 69.1 2.6 72 2-95 49-120 (121)
99 2vm1_A Thioredoxin, thioredoxi 97.8 1.7E-05 5.9E-10 65.0 5.3 72 2-97 44-115 (118)
100 2av4_A Thioredoxin-like protei 97.8 2.2E-05 7.6E-10 70.8 6.1 78 2-95 57-138 (160)
101 1faa_A Thioredoxin F; electron 97.8 1.7E-05 5.9E-10 66.1 4.7 71 2-95 53-123 (124)
102 3d22_A TRXH4, thioredoxin H-ty 97.8 1.7E-05 5.8E-10 67.6 4.6 71 2-96 62-132 (139)
103 2hls_A Protein disulfide oxido 97.8 3.2E-05 1.1E-09 73.5 6.5 77 2-102 154-232 (243)
104 1a8l_A Protein disulfide oxido 97.7 1.6E-05 5.6E-10 73.2 4.3 74 2-95 39-112 (226)
105 2kuc_A Putative disulphide-iso 97.7 1.4E-05 4.8E-10 67.1 3.4 77 2-97 43-122 (130)
106 1wmj_A Thioredoxin H-type; str 97.7 3E-05 1E-09 64.8 5.2 72 2-97 52-123 (130)
107 1ti3_A Thioredoxin H, PTTRXH1; 97.7 2.3E-05 7.9E-10 63.7 3.5 70 2-95 42-111 (113)
108 3uem_A Protein disulfide-isome 97.7 4E-05 1.4E-09 76.0 5.9 75 2-96 151-230 (361)
109 3emx_A Thioredoxin; structural 97.6 1.8E-05 6.3E-10 67.7 1.8 74 2-99 47-129 (135)
110 2lst_A Thioredoxin; structural 96.7 1E-05 3.4E-10 68.1 0.0 80 2-97 35-117 (130)
111 2ywm_A Glutaredoxin-like prote 97.6 4.9E-05 1.7E-09 70.3 4.6 69 2-96 152-220 (229)
112 3cxg_A Putative thioredoxin; m 97.6 3E-05 1E-09 66.4 2.7 75 2-97 56-130 (133)
113 1zma_A Bacterocin transport ac 97.5 1.7E-05 5.9E-10 65.7 0.9 71 2-92 45-117 (118)
114 2f51_A Thioredoxin; electron t 97.5 6E-05 2E-09 62.9 3.6 75 2-96 39-113 (118)
115 3kp8_A Vkorc1/thioredoxin doma 97.4 4.5E-05 1.5E-09 63.4 2.4 61 2-93 28-92 (106)
116 2dbc_A PDCL2, unnamed protein 97.4 0.00035 1.2E-08 59.8 7.7 74 2-95 46-120 (135)
117 2trc_P Phosducin, MEKA, PP33; 97.4 6.5E-05 2.2E-09 70.5 3.2 69 2-94 136-211 (217)
118 2fwh_A Thiol:disulfide interch 97.4 0.00016 5.5E-09 61.5 5.3 76 2-95 47-127 (134)
119 1wou_A Thioredoxin -related pr 97.4 9.3E-05 3.2E-09 62.2 3.3 71 2-93 47-122 (123)
120 3fk8_A Disulphide isomerase; A 97.3 0.00017 5.9E-09 60.7 4.3 71 2-94 45-131 (133)
121 2hls_A Protein disulfide oxido 97.2 0.00028 9.6E-09 66.9 4.7 72 2-95 43-116 (243)
122 1ilo_A Conserved hypothetical 97.1 0.00029 9.9E-09 53.4 3.7 61 2-91 15-76 (77)
123 3evi_A Phosducin-like protein 97.0 0.00069 2.3E-08 57.5 4.9 45 2-59 39-83 (118)
124 1a0r_P Phosducin, MEKA, PP33; 97.0 0.00042 1.4E-08 66.5 3.8 75 2-94 149-224 (245)
125 2ju5_A Thioredoxin disulfide i 96.9 0.00063 2.1E-08 59.5 4.4 75 2-96 64-152 (154)
126 3kp9_A Vkorc1/thioredoxin doma 96.7 0.00041 1.4E-08 68.3 1.5 60 2-92 213-276 (291)
127 1zzo_A RV1677; thioredoxin fol 96.6 0.0029 9.9E-08 52.1 6.1 73 3-96 42-135 (136)
128 2b5x_A YKUV protein, TRXY; thi 96.6 0.0025 8.6E-08 53.4 5.6 76 2-96 45-145 (148)
129 3erw_A Sporulation thiol-disul 96.6 0.0028 9.4E-08 53.0 5.6 72 2-91 50-144 (145)
130 1lu4_A Soluble secreted antige 96.5 0.0039 1.3E-07 51.6 5.9 72 3-95 41-135 (136)
131 2lja_A Putative thiol-disulfid 96.4 0.0071 2.4E-07 51.3 7.2 78 2-97 46-144 (152)
132 3f9u_A Putative exported cytoc 96.2 0.0031 1E-07 55.5 4.1 67 9-96 73-166 (172)
133 2f9s_A Thiol-disulfide oxidore 96.2 0.0042 1.4E-07 52.9 4.8 76 3-96 43-138 (151)
134 4f9z_D Endoplasmic reticulum r 96.1 0.0042 1.4E-07 57.8 4.7 69 2-96 40-112 (227)
135 3or5_A Thiol:disulfide interch 96.1 0.0073 2.5E-07 51.9 5.6 75 3-97 51-152 (165)
136 4f9z_D Endoplasmic reticulum r 96.0 0.008 2.7E-07 55.8 6.1 75 3-95 148-224 (227)
137 3hcz_A Possible thiol-disulfid 96.0 0.0062 2.1E-07 51.1 4.9 74 2-95 47-145 (148)
138 3raz_A Thioredoxin-related pro 96.0 0.0091 3.1E-07 51.0 5.9 77 2-96 40-140 (151)
139 1sen_A Thioredoxin-like protei 95.9 0.0026 8.9E-08 56.3 2.1 82 2-96 62-148 (164)
140 3fkf_A Thiol-disulfide oxidore 95.9 0.013 4.4E-07 49.1 6.0 74 2-96 49-146 (148)
141 1sji_A Calsequestrin 2, calseq 95.8 0.012 4.1E-07 58.1 6.4 68 4-96 157-225 (350)
142 3dml_A Putative uncharacterize 95.7 0.0078 2.7E-07 51.2 4.2 58 26-96 53-110 (116)
143 3gl3_A Putative thiol:disulfid 95.7 0.011 3.7E-07 50.1 4.9 82 3-102 45-148 (152)
144 2l5o_A Putative thioredoxin; s 95.6 0.015 5.1E-07 49.3 5.5 77 3-97 45-142 (153)
145 3ia1_A THIO-disulfide isomeras 95.4 0.016 5.4E-07 49.3 5.0 74 3-97 47-145 (154)
146 4evm_A Thioredoxin family prot 95.3 0.025 8.5E-07 46.1 5.8 72 3-93 39-136 (138)
147 2h30_A Thioredoxin, peptide me 95.3 0.0082 2.8E-07 51.6 2.9 47 38-96 110-156 (164)
148 3lor_A Thiol-disulfide isomera 95.0 0.044 1.5E-06 46.7 6.7 75 4-96 49-155 (160)
149 2h8l_A Protein disulfide-isome 95.0 0.035 1.2E-06 52.2 6.6 74 4-96 39-113 (252)
150 3eyt_A Uncharacterized protein 94.8 0.044 1.5E-06 46.7 6.0 74 5-96 48-152 (158)
151 2lrn_A Thiol:disulfide interch 94.6 0.043 1.5E-06 46.7 5.4 73 3-96 46-141 (152)
152 3us3_A Calsequestrin-1; calciu 94.4 0.039 1.3E-06 55.0 5.6 68 4-96 159-227 (367)
153 3hdc_A Thioredoxin family prot 94.2 0.051 1.7E-06 46.6 5.2 76 3-96 58-152 (158)
154 2dlx_A UBX domain-containing p 94.2 0.041 1.4E-06 48.7 4.5 76 9-103 68-143 (153)
155 3ec3_A Protein disulfide-isome 94.1 0.06 2E-06 50.7 5.7 75 3-96 39-115 (250)
156 2fgx_A Putative thioredoxin; N 93.8 0.045 1.5E-06 45.8 3.7 62 3-91 45-106 (107)
157 3kcm_A Thioredoxin family prot 93.5 0.066 2.3E-06 45.2 4.5 76 3-96 45-143 (154)
158 3ph9_A Anterior gradient prote 93.1 0.037 1.3E-06 48.8 2.3 83 2-96 60-145 (151)
159 1o8x_A Tryparedoxin, TRYX, TXN 93.0 0.058 2E-06 45.5 3.3 51 2-57 44-116 (146)
160 2ywi_A Hypothetical conserved 92.8 0.11 3.7E-06 46.1 4.9 84 3-96 63-174 (196)
161 2hyx_A Protein DIPZ; thioredox 92.8 0.082 2.8E-06 53.0 4.5 77 2-96 98-199 (352)
162 3ewl_A Uncharacterized conserv 92.8 0.095 3.3E-06 43.7 4.3 70 3-95 44-140 (142)
163 3lwa_A Secreted thiol-disulfid 92.7 0.092 3.2E-06 46.1 4.3 81 3-96 76-181 (183)
164 1i5g_A Tryparedoxin II; electr 92.7 0.062 2.1E-06 45.1 3.0 50 2-56 44-115 (144)
165 1o73_A Tryparedoxin; electron 92.7 0.055 1.9E-06 45.3 2.6 51 2-57 44-116 (144)
166 3ha9_A Uncharacterized thiored 92.6 0.13 4.5E-06 44.1 5.1 71 3-95 54-163 (165)
167 1kng_A Thiol:disulfide interch 92.2 0.072 2.5E-06 45.0 2.9 73 3-96 59-152 (156)
168 3fw2_A Thiol-disulfide oxidore 92.0 0.23 7.9E-06 41.9 5.8 72 3-95 52-147 (150)
169 3s9f_A Tryparedoxin; thioredox 91.9 0.097 3.3E-06 45.7 3.3 51 2-57 64-136 (165)
170 3bj5_A Protein disulfide-isome 91.7 0.28 9.7E-06 42.7 6.1 77 3-96 49-127 (147)
171 2l4c_A Endoplasmic reticulum r 91.6 0.25 8.4E-06 42.0 5.5 65 4-94 54-122 (124)
172 1z6n_A Hypothetical protein PA 91.6 0.087 3E-06 47.0 2.7 46 2-57 70-118 (167)
173 2b1k_A Thiol:disulfide interch 91.5 0.082 2.8E-06 45.6 2.4 72 3-96 68-160 (168)
174 3iv4_A Putative oxidoreductase 91.4 0.067 2.3E-06 45.2 1.7 45 2-57 40-89 (112)
175 3ira_A Conserved protein; meth 90.8 0.057 1.9E-06 48.9 0.7 47 3-58 56-113 (173)
176 2r2j_A Thioredoxin domain-cont 90.3 0.51 1.7E-05 47.0 7.2 65 6-95 152-217 (382)
177 2lrt_A Uncharacterized protein 90.1 0.27 9.4E-06 41.9 4.5 71 3-91 52-143 (152)
178 2jwa_A Receptor tyrosine-prote 90.1 0.25 8.4E-06 34.9 3.3 29 403-431 15-44 (44)
179 3eur_A Uncharacterized protein 89.8 0.3 1E-05 40.8 4.4 69 3-92 48-141 (142)
180 1hyu_A AHPF, alkyl hydroperoxi 89.6 0.31 1.1E-05 50.8 5.2 66 2-94 133-198 (521)
181 2cvb_A Probable thiol-disulfid 89.2 0.74 2.5E-05 40.3 6.7 81 2-97 49-160 (188)
182 2lus_A Thioredoxion; CR-Trp16, 86.8 0.12 4.2E-06 42.8 0.0 52 2-57 42-116 (143)
183 3kh7_A Thiol:disulfide interch 86.3 0.43 1.5E-05 41.9 3.3 47 38-96 121-167 (176)
184 1jfu_A Thiol:disulfide interch 85.6 0.75 2.6E-05 40.2 4.5 76 3-96 77-180 (186)
185 3u5r_E Uncharacterized protein 84.9 1.3 4.4E-05 40.4 5.9 84 2-96 75-187 (218)
186 2k8s_A Thioredoxin; dimer, str 84.8 0.13 4.5E-06 39.2 -0.7 45 3-55 17-61 (80)
187 3ed3_A Protein disulfide-isome 84.1 2.7 9.2E-05 40.5 8.1 72 4-96 175-267 (298)
188 1ttz_A Conserved hypothetical 83.3 0.82 2.8E-05 36.2 3.3 48 28-95 29-76 (87)
189 1wjk_A C330018D20RIK protein; 82.6 2.8 9.7E-05 33.4 6.4 57 25-99 43-99 (100)
190 1ego_A Glutaredoxin; electron 81.8 0.62 2.1E-05 35.2 2.0 64 3-95 16-83 (85)
191 2ggt_A SCO1 protein homolog, m 81.1 1.7 5.9E-05 36.6 4.8 80 3-96 41-161 (164)
192 4fo5_A Thioredoxin-like protei 80.7 1.3 4.5E-05 36.8 3.8 48 3-56 49-120 (143)
193 3q6o_A Sulfhydryl oxidase 1; p 80.4 2.4 8.1E-05 39.0 5.9 30 25-57 184-213 (244)
194 2rli_A SCO2 protein homolog, m 78.8 2.1 7.3E-05 36.4 4.7 80 3-96 44-164 (171)
195 3drn_A Peroxiredoxin, bacterio 78.5 1.4 4.8E-05 37.7 3.4 48 3-56 47-117 (161)
196 2h8l_A Protein disulfide-isome 77.8 1.9 6.4E-05 40.2 4.3 74 4-96 151-230 (252)
197 2k6v_A Putative cytochrome C o 73.6 0.93 3.2E-05 38.7 0.9 76 3-94 53-171 (172)
198 2ls5_A Uncharacterized protein 75.7 0.69 2.4E-05 39.2 0.0 48 2-56 49-121 (159)
199 3cmi_A Peroxiredoxin HYR1; thi 73.0 4.7 0.00016 34.6 5.4 25 4-34 49-73 (171)
200 3gv1_A Disulfide interchange p 72.6 1.3 4.6E-05 38.4 1.7 44 36-96 96-139 (147)
201 1we0_A Alkyl hydroperoxide red 72.6 2.6 8.8E-05 36.9 3.6 76 2-95 48-156 (187)
202 2ks1_B Epidermal growth factor 72.1 3.3 0.00011 29.1 3.2 30 401-430 13-42 (44)
203 1qmv_A Human thioredoxin perox 70.5 3 0.0001 37.0 3.5 78 4-95 53-162 (197)
204 1zof_A Alkyl hydroperoxide-red 70.3 2.5 8.4E-05 37.5 2.9 76 2-95 50-160 (198)
205 2l2t_A Receptor tyrosine-prote 70.2 2.6 9E-05 29.6 2.4 24 404-427 15-38 (44)
206 3gyk_A 27KDA outer membrane pr 70.0 2.8 9.7E-05 36.2 3.2 41 38-96 133-173 (175)
207 2bmx_A Alkyl hydroperoxidase C 69.0 3.4 0.00012 36.5 3.6 76 3-96 63-170 (195)
208 1xvw_A Hypothetical protein RV 67.8 5.2 0.00018 33.6 4.4 48 3-56 54-128 (160)
209 2p5q_A Glutathione peroxidase 64.9 3.9 0.00014 34.5 3.0 26 3-34 49-74 (170)
210 2vup_A Glutathione peroxidase- 62.0 5.1 0.00017 35.2 3.3 76 3-96 65-185 (190)
211 1zye_A Thioredoxin-dependent p 61.7 8.8 0.0003 34.9 5.0 79 3-95 74-184 (220)
212 3t58_A Sulfhydryl oxidase 1; o 60.4 5.5 0.00019 41.7 3.7 44 7-58 171-214 (519)
213 3dwv_A Glutathione peroxidase- 60.1 19 0.00066 31.3 6.8 27 2-34 62-88 (187)
214 1t3b_A Thiol:disulfide interch 57.9 4.7 0.00016 36.6 2.3 40 37-93 169-208 (211)
215 2ec4_A FAS-associated factor 1 57.2 14 0.00048 33.0 5.4 70 10-95 82-167 (178)
216 2h01_A 2-Cys peroxiredoxin; th 56.2 9.1 0.00031 33.5 3.9 79 3-95 49-158 (192)
217 1eej_A Thiol:disulfide interch 56.0 4.1 0.00014 37.0 1.6 42 37-95 169-210 (216)
218 1uul_A Tryparedoxin peroxidase 55.3 7.9 0.00027 34.3 3.4 78 4-95 55-164 (202)
219 2p31_A CL683, glutathione pero 54.8 10 0.00035 32.9 4.0 26 3-34 66-91 (181)
220 3bci_A Disulfide bond protein 49.2 7.9 0.00027 33.8 2.3 41 38-96 138-178 (186)
221 2v1m_A Glutathione peroxidase; 47.2 17 0.0006 30.3 4.1 26 3-34 48-73 (169)
222 2e7p_A Glutaredoxin; thioredox 46.7 3.4 0.00012 32.9 -0.5 40 3-53 35-77 (116)
223 2obi_A PHGPX, GPX-4, phospholi 45.0 13 0.00044 32.2 3.0 26 3-34 64-89 (183)
224 3gha_A Disulfide bond formatio 44.6 10 0.00035 34.1 2.4 42 38-97 152-193 (202)
225 2k9y_A Ephrin type-A receptor 44.3 4.2 0.00014 27.5 -0.2 19 395-413 9-27 (41)
226 4dvc_A Thiol:disulfide interch 42.5 11 0.00039 32.1 2.3 43 38-95 139-181 (184)
227 3a2v_A Probable peroxiredoxin; 40.4 17 0.00059 34.2 3.3 76 5-94 53-160 (249)
228 2in3_A Hypothetical protein; D 40.1 12 0.00042 33.2 2.1 46 38-96 165-210 (216)
229 2kw0_A CCMH protein; oxidoredu 38.4 18 0.00062 29.1 2.6 18 353-370 57-74 (90)
230 2hl7_A Cytochrome C-type bioge 37.9 18 0.00063 28.7 2.5 17 353-369 60-76 (84)
231 3ztl_A Thioredoxin peroxidase; 35.4 39 0.0013 30.5 4.7 76 4-93 88-195 (222)
232 1z6m_A Conserved hypothetical 35.1 11 0.00037 32.4 0.8 37 38-92 138-174 (175)
233 3ec3_A Protein disulfide-isome 34.5 63 0.0021 29.6 6.1 70 4-96 155-228 (250)
234 2i81_A 2-Cys peroxiredoxin; st 33.8 37 0.0013 30.5 4.3 78 4-95 71-179 (213)
235 2znm_A Thiol:disulfide interch 33.0 18 0.00063 31.4 2.0 41 38-95 139-179 (195)
236 1v58_A Thiol:disulfide interch 32.8 9.1 0.00031 35.5 -0.0 47 37-96 187-233 (241)
237 3gmf_A Protein-disulfide isome 31.2 21 0.00071 32.4 2.1 40 39-96 157-197 (205)
238 2imf_A HCCA isomerase, 2-hydro 30.9 16 0.00055 32.4 1.3 45 38-100 156-200 (203)
239 3kzq_A Putative uncharacterize 30.1 20 0.00068 31.9 1.8 46 38-96 158-203 (208)
240 3feu_A Putative lipoprotein; a 27.9 25 0.00085 30.9 2.0 43 38-95 141-183 (185)
241 2rem_A Disulfide oxidoreductas 27.6 25 0.00085 30.5 1.9 40 38-95 144-183 (193)
242 1xzo_A BSSCO, hypothetical pro 26.8 68 0.0023 26.7 4.6 28 3-34 51-78 (174)
243 3gn3_A Putative protein-disulf 25.9 25 0.00086 31.1 1.6 38 39-91 144-181 (182)
244 2lvu_A Zinc finger and BTB dom 30.8 15 0.00052 20.4 0.0 13 268-280 3-15 (26)
245 3c7m_A Thiol:disulfide interch 24.8 31 0.0011 29.7 2.0 43 38-95 151-193 (195)
246 2jsy_A Probable thiol peroxida 24.7 1.3E+02 0.0046 24.8 6.1 24 3-34 62-85 (167)
247 2hze_A Glutaredoxin-1; thiored 24.5 59 0.002 25.9 3.6 41 9-55 33-81 (114)
248 3hz8_A Thiol:disulfide interch 24.0 39 0.0013 29.8 2.5 18 38-55 143-160 (193)
249 2gs3_A PHGPX, GPX-4, phospholi 23.0 51 0.0018 28.4 3.1 43 4-53 67-118 (185)
250 3irb_A Uncharacterized protein 22.8 13 0.00046 32.2 -0.8 17 325-341 55-71 (145)
251 2f8a_A Glutathione peroxidase 22.7 74 0.0025 28.4 4.2 25 4-34 65-89 (208)
252 2l9u_A Receptor tyrosine-prote 21.5 46 0.0016 22.1 1.8 23 400-426 11-33 (40)
253 1h75_A Glutaredoxin-like prote 21.4 51 0.0018 24.0 2.4 28 26-55 26-56 (81)
254 3gkn_A Bacterioferritin comigr 21.2 1.5E+02 0.0051 24.3 5.7 75 5-94 55-160 (163)
255 3p0k_A Sulfhydryl oxidase; 4-h 20.5 38 0.0013 32.3 1.7 43 237-279 110-165 (266)
No 1
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=100.00 E-value=3.9e-71 Score=587.60 Aligned_cols=336 Identities=24% Similarity=0.474 Sum_probs=260.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
|+++|+|+++|+.+++.+ ..|.|++|||+.+.+.++|++|+|++|||+++|.+|.. .|. .+..+.|.
T Consensus 46 k~~~P~l~~la~~~~~~~----~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~-~G~--------~~~~~~g~ 112 (519)
T 3t58_A 46 IAFAPTWKELANDVKDWR----PALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTK-NGS--------GATLPGAG 112 (519)
T ss_dssp HHHHHHHHHHHHHHGGGT----TTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCC-SCC--------CEEECCSS
T ss_pred HHHHHHHHHHHHHhhCcC----CcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCccc-CCC--------ceeEecCC
Confidence 578999999999998632 25999999998766799999999999999999975532 222 12345577
Q ss_pred CCHHHHHHHHHHhcccCCC--------CC--------------Ccc----------------------------------
Q 013733 82 QTADGLLTWINKQTSRSYG--------LD--------------DEK---------------------------------- 105 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~~~--------l~--------------~~k---------------------------------- 105 (437)
++.+.|.++|.+.+..... +. +..
T Consensus 113 ~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s~~~~~~~ldl~~~~~v~v~~v~~ 192 (519)
T 3t58_A 113 ANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDSYLGREVTLDLSQYHAVAVRRVLN 192 (519)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTCCHHHHHHHHTTTCTTEEEEEEET
T ss_pred CCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCchHHHHHHHHHhhccCCeeEEEecC
Confidence 8999999998877654221 00 000
Q ss_pred --------cc------------ccC---CC------------------------------C---CC-------CCchhhh
Q 013733 106 --------FE------------NEQ---LP------------------------------S---NI-------SDPGQIA 122 (437)
Q Consensus 106 --------~~------------~~~---~~------------------------------~---~~-------~~~~~~~ 122 (437)
++ ++. ++ . .+ .++.++|
T Consensus 193 ~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 272 (519)
T 3t58_A 193 TESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSYLRGLPGLTRDAPPTTATPVTADKIAPTVWKFADRSKIY 272 (519)
T ss_dssp TCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHHHTTSTTCCCCCCC----------CCCCHHHHSCTTCEE
T ss_pred chHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHHHHHccCCCCCCCCCCCCCCccccccchhhhhcccccee
Confidence 00 000 00 0 00 1334455
Q ss_pred HHHHHHHHHHHHHHHHHh-hccccCccchHHHHHHHHHHHHhcCCCccccchHHHHHhhhhcCCC---CccchhhhHHhh
Q 013733 123 RAVYDVEEATTTAFDIIL-DHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNFDDFSPS---HMQSADKQEVVN 198 (437)
Q Consensus 123 ~~~~DlE~a~~~al~~~l-~~~~l~ge~l~AL~~fl~~l~~~~P~~~~r~~~~~ll~~~~~~~~~---~~~~~~~~~~~~ 198 (437)
++ |||+|++|+|++++ ++++|+|++|.||++||.+|++|||++. .++.+|..+.++... ..... +..
T Consensus 273 ~~--Dle~al~~~l~~ev~~~~~~~g~~l~al~~~~~~l~~~~P~~~---~~~~~l~~l~~~l~~~~~~~~~~--~~~-- 343 (519)
T 3t58_A 273 MA--DLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAKYFPGQP---LVQNFLHSINDWLQKQQKKRIPY--SFF-- 343 (519)
T ss_dssp HH--HHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHCCCSEEEH--HHH--
T ss_pred HH--HHHHHHHHHHHHHhcccccccCchHHHHHHHHHHHHHHCCCch---HHHHHHHHHHHHHHhcccccCCH--HHH--
Confidence 65 99999999999654 8899999999999999999999999974 345667666542211 11111 111
Q ss_pred cCCCCCCCCccccCCCCCCC-CceeccCCCCCcCcccchHHHHHHHHhcccCCC---------CCHHHHHHHHHHHHhcC
Q 013733 199 NNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDG---------ESQFTFTAVCDFIHNFF 268 (437)
Q Consensus 199 ~~~~~~l~~~~~~g~~~~~~-~w~~C~gS~p~~Rgy~CglW~LfH~ltv~~~~~---------~~~~~~~~i~~fv~~Ff 268 (437)
...+++. ..|.+++++ +|++|+||+|++||||||||+|||+|||++|+. +.+.++++|++||++||
T Consensus 344 ---~~~~~~~-~~~~~~~~~~~w~~C~gs~~~~rg~~C~lW~l~Htltv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ff 419 (519)
T 3t58_A 344 ---KAALDSR-KEDAVLTEKVNWVGCQGSEPHFRGFPCSLWVLFHFLTVQANRYSEAHPQEPADGQEVLQAMRSYVQFFF 419 (519)
T ss_dssp ---HHHHHHT-THHHHTCSSCCCSTTBCSSTTSBSHHHHHHHHHHHHHHHHHHHHHTSTTSCCCSCHHHHHHHHHHHHHC
T ss_pred ---HHHHHhc-ccCCcCCCCCCcccCCCCCcccCCcCcHHHHHHHHHHccCccCCccccccccchHHHHHHHHHHHHHCC
Confidence 1122211 125556765 999999999999999999999999999999864 35579999999999999
Q ss_pred CChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhHHhhhhcCcccCCCCCCCCCCCCCCCCCCCChhhhccCCCCCCcc
Q 013733 269 VCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKF 348 (437)
Q Consensus 269 ~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~VN~rL~~~~~~~~~~Dp~fpk~q~P~~~~Cp~C~~~~~~~~~~~ 348 (437)
||.+||+||++|+++.+++++|++++++|||++||+||+||+|+ .+|||+|||+|||++++||+||++.+.+
T Consensus 420 ~C~~Ca~hF~~~~~~~~~~v~s~~~~~~Wlw~~HN~VN~rL~~~----~~~dp~f~k~q~P~~~~C~~C~~~~~~~---- 491 (519)
T 3t58_A 420 GCRDSADHFEQMAAASMHQVRSPSNAILWLWTSHNRVNARLSGA----LSEDPHFPKVQWPPRELCSACHNELNGQ---- 491 (519)
T ss_dssp SBHHHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC----TTCCTTSCCCSSSCTTTCSTTBCSCTTS----
T ss_pred CchHHHHHHHHHHhhCCCcCCCHHHHHHHHHHhhCHHHhhcCCC----CCCCCCCCccCCCCchhChhhhhcccCC----
Confidence 99999999999999999999999999999999999999999998 8999999999999999999999876322
Q ss_pred CCCCCCHHHHHHHHHHHhCCCccc
Q 013733 349 RQIDWDQDEVFKFLTNYYGNTLVS 372 (437)
Q Consensus 349 ~~~~w~~~~Vl~fL~~~Y~~~~~s 372 (437)
.++||+++||+||++|||+++++
T Consensus 492 -~~~w~~~~v~~fl~~~y~~~n~~ 514 (519)
T 3t58_A 492 -VPLWDLGATLNFLKAHFSPANIV 514 (519)
T ss_dssp -CCCBCHHHHHHHHHHHTSGGGEE
T ss_pred -cccCCHHHHHHHHHHHcCccccc
Confidence 57899999999999999999875
No 2
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=100.00 E-value=3.7e-71 Score=578.91 Aligned_cols=344 Identities=25% Similarity=0.412 Sum_probs=254.5
Q ss_pred CcchhHHHHHHHHhCCCCC-CCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCC-CCCCCcccccccccC
Q 013733 2 RNYKPQYEKVARLFNGPNA-AHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAG-SWEPNQEKKEIRALE 79 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~-~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G-~~~~~~~~~~i~~y~ 79 (437)
|.++|+|+++|+.+..... ...+.|.|++|||+.+ .++|++|+|++|||+++|.++..... ..........+..+.
T Consensus 58 k~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~--~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~ 135 (470)
T 3qcp_A 58 RRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE--VDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHVAFEN 135 (470)
T ss_dssp HHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC--HHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSC
T ss_pred HHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC--HHHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHHHHHH
Confidence 5689999999999874320 0002599999999976 99999999999999999954421100 000000001111111
Q ss_pred CCCCHHHHHHH----HHHhc-----------ccCCCCCCcccccc--CC-----CCCCCCchhhhHHHHHHHHHHHHHHH
Q 013733 80 DWQTADGLLTW----INKQT-----------SRSYGLDDEKFENE--QL-----PSNISDPGQIARAVYDVEEATTTAFD 137 (437)
Q Consensus 80 g~Rtae~Iv~~----i~k~l-----------~~~~~l~~~k~~~~--~~-----~~~~~~~~~~~~~~~DlE~a~~~al~ 137 (437)
...+.+.|... |++++ +.+|.++++|.+++ .+ .....+..+++++ |||+|++++|+
T Consensus 136 k~l~~~eLe~~~e~Link~~~~~~~~~e~c~~~~~~l~~~k~e~~~~~~~~~~~~~~~~~~s~~y~~--Dle~al~~~L~ 213 (470)
T 3qcp_A 136 SHLEVDELESEVRRLVNKHMVVDDSLKERCIDMHFKLYTSKEELVKRSVSSTDESGRFVETTELYAT--DIAGAFFSAMH 213 (470)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCCCCSCCHH--HHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHhhhccccCCccccchhhceecccccchhhhhhhcccccccccccchhhehHH--HHHHHHHHHHH
Confidence 22233333332 34444 45566677777654 22 2335677888886 99999999999
Q ss_pred HH-hhccccCccchHHHHHHHHHHHHhcCCCccccchHHHHHhhhhcCCCCccchhhhHHhhcCCCCCCCCccccCCCCC
Q 013733 138 II-LDHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNFDDFSPSHMQSADKQEVVNNNGKGGLGNFPICGKEVP 216 (437)
Q Consensus 138 ~~-l~~~~l~ge~l~AL~~fl~~l~~~~P~~~~r~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~ 216 (437)
++ ..+++|+|++|.||++||++|++|||++. ...+|..++.+.... ..... +. ...+.+..+++..+|
T Consensus 214 ~ev~~~~~~~g~~l~al~~fl~~l~~~~P~~~----~~~~~~~l~~~~~~~-~~~~~-~~-----~~~~~~~~~~~~~~~ 282 (470)
T 3qcp_A 214 YDVSLVGTEPRERLTALEDFVLLVKDSLPSIG----ADGVVSALESITAER-PFTVA-SW-----QDAVVKSGIPFDGSP 282 (470)
T ss_dssp THHHHHCSCSHHHHHHHHHHHHHHHHHSTTSS----HHHHHHHHHTCCSSS-CCCHH-HH-----HHHHHHTCCCCSEET
T ss_pred HHhcccccccchhHHHHHHHHHHHHHHCCCcc----HHHHHHHHHHHhhcC-CCCHH-HH-----HHHHHhccCCcCCCC
Confidence 65 57899999999999999999999999862 223555554332222 22211 11 111222345555567
Q ss_pred CC-CceeccCCCCCcCcccchHHHHHHHHhcccCCCCCHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCCCCCCChhHHH
Q 013733 217 RG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDGESQFTFTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFA 295 (437)
Q Consensus 217 ~~-~w~~C~gS~p~~Rgy~CglW~LfH~ltv~~~~~~~~~~~~~i~~fv~~Ff~C~~C~~hF~~~~~~~~~~v~s~~~~v 295 (437)
++ +|++|+||+|++||||||||+|||+|||++|+ .+.++.+|++||++||||.+|++||++|+ ++++++++
T Consensus 283 ~~~~w~~C~gs~~~~rg~~CslW~l~Htlt~~~~~--~~~~~~~~~~~~~~ffpC~~Ca~hF~~~~------~~s~~~~~ 354 (470)
T 3qcp_A 283 RNVRWRTCRGSSPQYRGFPCGMWLLLHALTVNTPA--DRNVLEVIQNYIRYFFSCKECRDHFIQFN------FSPNEDPV 354 (470)
T ss_dssp TEECCSTTCCSSTTSSSHHHHHHHHHHHHHHHCCT--TCCHHHHHHHHHHHHCSCHHHHHHHTTCC------CCSSSCHH
T ss_pred CCCcccccCCCCCccCCcCchHHHHHHHHHhhCCC--ChHHHHHHHHHHHHccCcHHHHHHHHHHh------ccCHHHHH
Confidence 76 89999999999999999999999999999998 46789999999999999999999999986 67899999
Q ss_pred HHHHHhhhHHhhhhcCcccCCCCCCCCCCCCCCCCCCCChhhhccCCCCCCccCCCCCCHHHHHHHHHHHhCCC--cccc
Q 013733 296 LWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKFRQIDWDQDEVFKFLTNYYGNT--LVSL 373 (437)
Q Consensus 296 lWLW~~HN~VN~rL~~~~~~~~~~Dp~fpk~q~P~~~~Cp~C~~~~~~~~~~~~~~~w~~~~Vl~fL~~~Y~~~--~~s~ 373 (437)
+|||++||+||+||+|++ .+|||+|||+|||++++||+||... +.||+++||+||+++|+.+ +++.
T Consensus 355 lWlw~~HN~VN~rL~~~~---~~~dp~fpk~~~P~~~~C~~C~~~~---------~~w~~~~v~~~l~~~y~~~~~~~~~ 422 (470)
T 3qcp_A 355 LQLWRAHNNVNARLANVK---DGADPLVPKRQFPTLEACTECYDGA---------GNFIEAHVTGFLKQRYLWDPKAVGL 422 (470)
T ss_dssp HHHHHHHHHHHHHHTTCC---TTSCTTSCCCCSSCTTTCSSSSCSS---------SSCCTTHHHHHHHHHTCCCHHHHSS
T ss_pred HHHHHHhCHHHHhcCCCC---CCCCCCCCccCCCCchhChhhhcCC---------CCCCHHHHHHHHHHHhCCCcchhhh
Confidence 999999999999999974 6999999999999999999999753 4799999999999999955 6777
Q ss_pred ccccccc
Q 013733 374 YKDREFL 380 (437)
Q Consensus 374 ~~~~~~~ 380 (437)
+++++.+
T Consensus 423 ~~~~~~~ 429 (470)
T 3qcp_A 423 MESNDDL 429 (470)
T ss_dssp CCCGGGG
T ss_pred hcccCCc
Confidence 7777764
No 3
>3llk_A Sulfhydryl oxidase 1; disulfide, flavin adenine dinucleotide, alternative splicing, FAD, flavoprotein, glycoprotein, GOLG apparatus, membrane; HET: FAD FLC; 2.00A {Homo sapiens} PDB: 3lli_A*
Probab=100.00 E-value=3.4e-69 Score=523.33 Aligned_cols=235 Identities=30% Similarity=0.595 Sum_probs=195.2
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHHh-hccccCccchHHHHHHHHHHHHhcCCCccccchHHHHHhhhhcCCC---Cccc
Q 013733 115 ISDPGQIARAVYDVEEATTTAFDIIL-DHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNFDDFSPS---HMQS 190 (437)
Q Consensus 115 ~~~~~~~~~~~~DlE~a~~~al~~~l-~~~~l~ge~l~AL~~fl~~l~~~~P~~~~r~~~~~ll~~~~~~~~~---~~~~ 190 (437)
..++.++|++ |||+|++|+|++++ ++++|+|++|.||++||++|++|||++. .++++|..+.+.... ....
T Consensus 8 ~~~~~~vy~a--DLe~al~~~L~~Ev~~~~~i~g~~l~AL~~fl~vl~~~~P~~~---~~~~~l~~l~~~l~~~~~~~i~ 82 (261)
T 3llk_A 8 LADRSKIYMA--DLESALHYILRIEVGRFPVLEGQRLVALKKFVAVLAKYFPGRP---LVQNFLHSVNEWLKRQKRNKIP 82 (261)
T ss_dssp CCCTTSEEHH--HHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHCCSSEEE
T ss_pred ccChhHhHHH--HHHHHHHHHHHHHhcCcCcCCCchhHHHHHHHHHHHHHCCCcH---HHHHHHHHHHHHHHhCcccCCC
Confidence 4678899987 99999999999654 8899999999999999999999999973 455666666442211 1111
Q ss_pred hhhhHHhhcCCCCCCCCccccCCCCCCC-CceeccCCCCCcCcccchHHHHHHHHhcccCCCC---------CHHHHHHH
Q 013733 191 ADKQEVVNNNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDGE---------SQFTFTAV 260 (437)
Q Consensus 191 ~~~~~~~~~~~~~~l~~~~~~g~~~~~~-~w~~C~gS~p~~Rgy~CglW~LfH~ltv~~~~~~---------~~~~~~~i 260 (437)
. ++ +...+++. ..|..++++ +|+||+||+|++||||||||+|||+|||++++++ +++++++|
T Consensus 83 ~--~~-----~~~~l~~~-~~~~~~~~~~~WvgC~GS~p~~RGy~CgLW~LFH~LTV~a~~~~~~~~~~~~~~~~vl~ai 154 (261)
T 3llk_A 83 Y--SF-----FKTALDDR-KEGAVLAKKVNWIGCQGSEPHFRGFPCSLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAI 154 (261)
T ss_dssp H--HH-----HHHHHHHT-THHHHTCSSCCCSTTCCSSTTSSSHHHHHHHHHHHHHHHHHCC---------CGGGHHHHH
T ss_pred H--HH-----HHHHHHhh-hccCccCCCCcccccCCCCCccCCcCcHHHHHHHHHHhhhhcccccccccccCHHHHHHHH
Confidence 1 11 11122221 123344544 9999999999999999999999999999987653 45799999
Q ss_pred HHHHHhcCCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhHHhhhhcCcccCCCCCCCCCCCCCCCCCCCChhhhcc
Q 013733 261 CDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYRS 340 (437)
Q Consensus 261 ~~fv~~Ff~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~VN~rL~~~~~~~~~~Dp~fpk~q~P~~~~Cp~C~~~ 340 (437)
++||++||||++|++||++|+++.++++++++++++|||++||+||+||+|+ .+|||+|||+|||++++||+||.+
T Consensus 155 ~~fv~~FypC~~Ca~hF~~~~~~~~~~v~sr~~~~lWLw~~HN~VN~rLag~----~seDP~fpK~qwP~~~~Cp~C~~~ 230 (261)
T 3llk_A 155 RGYVHYFFGCRDCASHFEQMAAASMHRVGSPNAAVLWLWSSHNRVNARLAGA----PSEDPQFPKVQWPPRELCSACHNE 230 (261)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC----TTSCTTSCCCSSSCTTTCSTTBCC
T ss_pred HHHHHHcCCcHHHHHHHHHHHhhCCCccCCHHHHHHHHHHhcCHHhhhcCCC----CCCCCCCCccCCCCchhChHHHhc
Confidence 9999999999999999999999989999999999999999999999999998 799999999999999999999987
Q ss_pred CCCCCCccCCCCCCHHHHHHHHHHHhCCCccc
Q 013733 341 HHHGDMKFRQIDWDQDEVFKFLTNYYGNTLVS 372 (437)
Q Consensus 341 ~~~~~~~~~~~~w~~~~Vl~fL~~~Y~~~~~s 372 (437)
+++ .++||+++||+||++|||++++.
T Consensus 231 ~~~------~~~W~~~~Vl~fLk~~y~~~nl~ 256 (261)
T 3llk_A 231 RLD------VPVWDVEATLNFLKAHFSPSNII 256 (261)
T ss_dssp CSS------SCSBCHHHHHHHHHHHTSGGGEE
T ss_pred cCC------CCCCCHHHHHHHHHHHcCccccc
Confidence 643 47899999999999999999863
No 4
>2hj3_A Sulfhydryl oxidase ERV1P; four-helix bundle, flavin adenine dinucleotide, oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana}
Probab=99.94 E-value=3.5e-28 Score=212.39 Aligned_cols=106 Identities=23% Similarity=0.468 Sum_probs=85.2
Q ss_pred CcCcccchHHHHHHHHhcccCCCCCHHHHHHHHHH---HHhcCCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhHH
Q 013733 229 DTRGFSCGLWVLLHSLSVRIDDGESQFTFTAVCDF---IHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQV 305 (437)
Q Consensus 229 ~~Rgy~CglW~LfH~ltv~~~~~~~~~~~~~i~~f---v~~Ff~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~V 305 (437)
....+.||+|+|||+||++||+.|+....+.++.| |.+||||.+||+||.+|+++.+++|+|++++++|||++||+|
T Consensus 9 ~~~~lG~slW~llHtlaa~yp~~pt~~~~~~~~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~V 88 (125)
T 2hj3_A 9 TKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNTV 88 (125)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHH
T ss_pred CccccCcchhHHHHHHHhhCcCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 45578899999999999999999997755555544 568999999999999999999999999999999999999999
Q ss_pred hhhhcCcccCCCCCCCCCCCCCCCCCCCCh
Q 013733 306 NERLMKLEASLKTGDPKFPKIIWPPKQLCS 335 (437)
Q Consensus 306 N~rL~~~~~~~~~~Dp~fpk~q~P~~~~Cp 335 (437)
|+||+|++|+|...+.+|-.. |+....|-
T Consensus 89 N~rL~Kp~f~c~~~~~rw~~g-~~d~~~c~ 117 (125)
T 2hj3_A 89 NRSLGKLVFPCERVDARWGKL-ECEQKSCD 117 (125)
T ss_dssp HHHTTCCCCCTTSHHHHCC-----------
T ss_pred HHhhCCCCCCHHHHHHHhccC-CCCCCCcC
Confidence 999999999998777666544 55544443
No 5
>1jr8_A ERV2 protein, mitochondrial; FAD, sulfhydryl oxidase, helical bundle, CXXC, oxidoreductase; HET: FAD; 1.50A {Saccharomyces cerevisiae} SCOP: a.24.15.1 PDB: 1jra_A*
Probab=99.94 E-value=7.4e-28 Score=208.09 Aligned_cols=92 Identities=22% Similarity=0.336 Sum_probs=80.8
Q ss_pred CcccchHHHHHHHHhcccCCCCCHHH---HHHHHHHHHhcCCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhHHhh
Q 013733 231 RGFSCGLWVLLHSLSVRIDDGESQFT---FTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNE 307 (437)
Q Consensus 231 Rgy~CglW~LfH~ltv~~~~~~~~~~---~~~i~~fv~~Ff~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~VN~ 307 (437)
..+.||+|+|||+|||+||++|+... +..|..++.+||||.+||+||.+|+++.+++|+|++++++|||++||.||+
T Consensus 9 ~~lG~s~W~llHtlaa~~p~~pt~~~~~~l~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~VN~ 88 (117)
T 1jr8_A 9 KEVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIEKYPVQTSSRTAAAMWGCHIHNKVNE 88 (117)
T ss_dssp HHHHHHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred hhccccHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999998654 455555566799999999999999999999999999999999999999999
Q ss_pred hhcCcccCCCCCCCC
Q 013733 308 RLMKLEASLKTGDPK 322 (437)
Q Consensus 308 rL~~~~~~~~~~Dp~ 322 (437)
||+|++|+|..-+.+
T Consensus 89 rL~kp~f~c~~~~er 103 (117)
T 1jr8_A 89 YLKKDIYDCATILED 103 (117)
T ss_dssp HTTCCCCCCTTHHHH
T ss_pred HhCCCCcCHHHHHHH
Confidence 999999988765443
No 6
>3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprot oxidoreductase, virion; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus}
Probab=99.92 E-value=7.4e-26 Score=194.78 Aligned_cols=80 Identities=14% Similarity=0.342 Sum_probs=75.5
Q ss_pred cchHHHHHHHHhcccCCCCCHHHHHHHHHHHH---hcCCChHHHHHHHHHHhcCC----CC-CCChhHHHHHHHHhhhHH
Q 013733 234 SCGLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVT----SP-FNKTRDFALWLWSTHNQV 305 (437)
Q Consensus 234 ~CglW~LfH~ltv~~~~~~~~~~~~~i~~fv~---~Ff~C~~C~~hF~~~~~~~~----~~-v~s~~~~vlWLW~~HN~V 305 (437)
-.++|+|||+||+++|+.|+.+.+++|++||+ +||||.+|++||.+|+++.+ ++ ++|++++++|||++||+|
T Consensus 10 Grs~W~llHt~aa~~p~~pt~~~~~~~~~fi~~~~~~yPC~~Ca~hf~~~~~~~p~~~~~~~v~sr~~~~~Wlc~~HN~V 89 (114)
T 3gwn_A 10 GTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAV 89 (114)
T ss_dssp HHHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHTTSGGGCCCGGGGSSHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCcCCccccCCHHHHHHHHHHHHhHH
Confidence 35799999999999999999999999999998 57999999999999999888 78 999999999999999999
Q ss_pred hhhhcCcc
Q 013733 306 NERLMKLE 313 (437)
Q Consensus 306 N~rL~~~~ 313 (437)
|+||+||.
T Consensus 90 N~rLgKp~ 97 (114)
T 3gwn_A 90 NNKLEVDY 97 (114)
T ss_dssp HHHTTCCC
T ss_pred HHHhCCCC
Confidence 99999974
No 7
>3gwl_A P14, FAD-linked sulfhydryl oxidase; homodimer, five-helix bundle, cytoplasm, disulfide bond, flavoprotein, late protein; HET: FAD; 2.10A {African swine fever virus BA71V}
Probab=99.92 E-value=1.6e-25 Score=190.26 Aligned_cols=86 Identities=24% Similarity=0.399 Sum_probs=75.2
Q ss_pred chHHHHHHHHhcccCCCCCHHHHHHHHHHHH---hcCCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhHHhhhhcC
Q 013733 235 CGLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMK 311 (437)
Q Consensus 235 CglW~LfH~ltv~~~~~~~~~~~~~i~~fv~---~Ff~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~VN~rL~~ 311 (437)
=++|+|||+||++||++|+......++.||+ ++|||.+|++||.+++++.++++.+++++++|||++||+||+||+|
T Consensus 9 ra~W~llHt~aa~yP~~Pt~~~~~~~~~~i~~f~~~yPC~~Ca~hf~~~~~~~p~~~~s~~~~~lWlc~~HN~VN~rLgK 88 (106)
T 3gwl_A 9 PKYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIESLPCTRCQHHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNNRLNK 88 (106)
T ss_dssp HHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCccChHHHHHHHHHHHhHHHHhhCC
Confidence 4799999999999999999865555555554 3499999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC
Q 013733 312 LEASLKTGD 320 (437)
Q Consensus 312 ~~~~~~~~D 320 (437)
|+|+|..-+
T Consensus 89 p~fdc~~~~ 97 (106)
T 3gwl_A 89 KIISWSEYK 97 (106)
T ss_dssp CCCCHHHHH
T ss_pred CCCCHHHHH
Confidence 999886544
No 8
>4e0h_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; four-helix bundle, flavin-linked sulfhydryl oxidase, FAD BIN oxidation; HET: FAD; 2.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.8e-24 Score=181.85 Aligned_cols=83 Identities=19% Similarity=0.431 Sum_probs=77.9
Q ss_pred hHHHHHHHHhcccCCCCCHHHHHHHHHHHH---hcCCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhHHhhhhcCc
Q 013733 236 GLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 312 (437)
Q Consensus 236 glW~LfH~ltv~~~~~~~~~~~~~i~~fv~---~Ff~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~VN~rL~~~ 312 (437)
++|++||+||++||+.|+.+....+++||. +||||.+||+||.+++++.++.++|++++++|||++||.||+||+|+
T Consensus 10 ~~W~~lHtia~~yP~~pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~p~~~~sr~~l~~Wl~~~HN~VN~rLgKp 89 (106)
T 4e0h_A 10 SSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKP 89 (106)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999999998 58999999999999999999999999999999999999999999998
Q ss_pred ccCCCC
Q 013733 313 EASLKT 318 (437)
Q Consensus 313 ~~~~~~ 318 (437)
+++|..
T Consensus 90 ~f~~~~ 95 (106)
T 4e0h_A 90 KFDCNF 95 (106)
T ss_dssp CCCGGG
T ss_pred CCCHHH
Confidence 776643
No 9
>3u5s_A FAD-linked sulfhydryl oxidase ALR; flavin, liver, oxidoreductase; HET: FAD; 1.50A {Homo sapiens} PDB: 3mbg_A* 3tk0_A* 3o55_A* 3u2m_A* 3u2l_A* 3r7c_A* 1oqc_A*
Probab=99.89 E-value=2.2e-23 Score=182.32 Aligned_cols=88 Identities=24% Similarity=0.363 Sum_probs=81.2
Q ss_pred chHHHHHHHHhcccCCCCCHHHHHHHHHHHHh---cCCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhHHhhhhcC
Q 013733 235 CGLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMK 311 (437)
Q Consensus 235 CglW~LfH~ltv~~~~~~~~~~~~~i~~fv~~---Ff~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~VN~rL~~ 311 (437)
=++|+|||+||++||+.|+.+....+++||.. ||||.+|++||.+++++.++.++||+++++|||.+||.||+||+|
T Consensus 25 ~atW~~LHtia~~yP~~Pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~pp~l~SR~~l~~Wl~~~HN~VN~rLgK 104 (126)
T 3u5s_A 25 RHSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPXEEXAEDLRKRLARNHPDTRTRAAFTQWLXHLHNEVNRKLGK 104 (126)
T ss_dssp HHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999985 699999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCC
Q 013733 312 LEASLKTGDPK 322 (437)
Q Consensus 312 ~~~~~~~~Dp~ 322 (437)
++|+|...+.+
T Consensus 105 p~fd~~~~~er 115 (126)
T 3u5s_A 105 PDFDXSKVDER 115 (126)
T ss_dssp CCCCGGGHHHH
T ss_pred CCCCHHHHHHH
Confidence 98877654433
No 10
>4e0i_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; flavin-linked sulfhydryl oxidase, MIA40, oxidation, mitochon intermembrane space; HET: FAD; 3.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.2e-21 Score=181.97 Aligned_cols=91 Identities=18% Similarity=0.364 Sum_probs=83.6
Q ss_pred CCcCcccchHHHHHHHHhcccCCCCCHHHHHHHHHHHH---hcCCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhH
Q 013733 228 NDTRGFSCGLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQ 304 (437)
Q Consensus 228 p~~Rgy~CglW~LfH~ltv~~~~~~~~~~~~~i~~fv~---~Ff~C~~C~~hF~~~~~~~~~~v~s~~~~vlWLW~~HN~ 304 (437)
|...-+--++|+|||+||++||++|+.+..+.+++||. +||||.+|++||.++++..++.++|++++++|||.+||.
T Consensus 85 ~d~~elGp~~W~~LHTiA~~YP~~Pt~~~k~~~~~Fi~~l~~~lPC~~C~~hf~~~lk~~pp~l~SR~~l~~Wl~~~HN~ 164 (189)
T 4e0i_A 85 PDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWSAKDFEKYIRENAPQVESREELGRWMCEAHNK 164 (189)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHH
T ss_pred CChhhcCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHH
Confidence 44455677899999999999999999999999999998 479999999999999999999999999999999999999
Q ss_pred HhhhhcCcccCCCC
Q 013733 305 VNERLMKLEASLKT 318 (437)
Q Consensus 305 VN~rL~~~~~~~~~ 318 (437)
||+||+|++|+|..
T Consensus 165 VN~rLgKp~fdc~~ 178 (189)
T 4e0i_A 165 VNKKLRKPKFDCNF 178 (189)
T ss_dssp HHHHTTCCCCCGGG
T ss_pred HHHHcCCCCCCHHH
Confidence 99999999877654
No 11
>3td7_A FAD-linked sulfhydryl oxidase R596; four helix-bundle, orfan domain, oxidoreductase; HET: FAD; 2.21A {Acanthamoeba polyphaga mimivirus}
Probab=99.71 E-value=8.7e-18 Score=163.04 Aligned_cols=78 Identities=14% Similarity=0.343 Sum_probs=72.1
Q ss_pred hHHHHHHHHhcccCCCCCHHHHHHHHHHHH---hcCCChHHHHHHHHHHhcCC-----CCCCChhHHHHHHHHhhhHHhh
Q 013733 236 GLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVT-----SPFNKTRDFALWLWSTHNQVNE 307 (437)
Q Consensus 236 glW~LfH~ltv~~~~~~~~~~~~~i~~fv~---~Ff~C~~C~~hF~~~~~~~~-----~~v~s~~~~vlWLW~~HN~VN~ 307 (437)
++|++||+||++||++|+....+.+++||. +|+||.+|++||.+++.+.+ +.++||++++.|||.+||.||+
T Consensus 46 stW~fLHTIAa~YPenPT~~dKk~y~~FI~nL~~vLPC~~Cr~HF~k~Lkk~Pv~~~~p~L~SRdsLskWL~~iHN~VNk 125 (295)
T 3td7_A 46 AGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNN 125 (295)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHTTSGGGCCCTTGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999998 57999999999999998754 4478999999999999999999
Q ss_pred hhcCcc
Q 013733 308 RLMKLE 313 (437)
Q Consensus 308 rL~~~~ 313 (437)
||+|+.
T Consensus 126 rLGKP~ 131 (295)
T 3td7_A 126 KLEVDY 131 (295)
T ss_dssp HHTCCC
T ss_pred HhCCCC
Confidence 999974
No 12
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.02 E-value=3.6e-10 Score=104.07 Aligned_cols=97 Identities=13% Similarity=0.202 Sum_probs=70.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccC---CCCCCCccccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVA---GSWEPNQEKKEIRAL 78 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~---G~~~~~~~~~~i~~y 78 (437)
|.|+|+||++|+.+.+..+. ++|.|++||++.+ ++++.+|+|+++|||++|++|.... ..+.. .........
T Consensus 60 k~l~P~~e~lA~~~~~~~~~--~~v~f~kvD~d~~--~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~-~~~~~y~~~ 134 (178)
T 3ga4_A 60 HDFEKTYHAVADVIRSQAPQ--SLNLFFTVDVNEV--PQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKT-SPFYQYSLV 134 (178)
T ss_dssp HHHHHHHHHHHHHHHHHCTT--CCEEEEEEETTTC--HHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTT-SCCEEECCC
T ss_pred HHHHHHHHHHHHHhhhccCC--CCEEEEEEECccC--HHHHHHcCCCCCCEEEEEcCCCCCCcccccccc-CCcceeecc
Confidence 57899999999998622100 3699999999865 9999999999999999998875433 12111 001111111
Q ss_pred CC-CCCHHHHHHHHHHhcccCCCCCC
Q 013733 79 ED-WQTADGLLTWINKQTSRSYGLDD 103 (437)
Q Consensus 79 ~g-~Rtae~Iv~~i~k~l~~~~~l~~ 103 (437)
.| +++++.|.+||.++++....+..
T Consensus 135 ~~~~~~ae~la~fi~~~t~~~i~I~r 160 (178)
T 3ga4_A 135 PENAENTLQFGDFLAKILNISITVPQ 160 (178)
T ss_dssp GGGTTCHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCCcCHHHHHHHHHHhcCCCccccC
Confidence 35 89999999999999987776654
No 13
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.88 E-value=2.3e-09 Score=90.89 Aligned_cols=78 Identities=6% Similarity=0.060 Sum_probs=61.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
++++|+|+++|+.+.... ..+.|.+++|||+.+ .++|++|+|++|||+++|.+|... ....|.|.
T Consensus 49 ~~~~p~~~~la~~~~~~~--~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~g~~~-----------~~~~~~G~ 113 (127)
T 3h79_A 49 VAAMRLWDDLSMSQSQKR--NHLTFVAARIDGEKY--PDVIERMRVSGFPTMRYYTRIDKQ-----------EPFEYSGQ 113 (127)
T ss_dssp HHHHHHHHHHHHHHHTST--TTTTEEEEEEETTTC--HHHHHHTTCCSSSEEEEECSSCSS-----------SCEECCSC
T ss_pred HHHhHHHHHHHHHHHhcc--cCCCeEEEEEEcccc--HhHHHhcCCccCCEEEEEeCCCCC-----------CceEecCC
Confidence 468999999999875321 113699999999975 999999999999999998644211 11357899
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
++.+.|.+||.+.
T Consensus 114 ~~~~~l~~~i~~~ 126 (127)
T 3h79_A 114 RYLSLVDSFVFQN 126 (127)
T ss_dssp CCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhc
Confidence 9999999999874
No 14
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.84 E-value=3.7e-09 Score=102.11 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=63.3
Q ss_pred chhHHHHHHHHhCC-CCCCCCcceEEEEEeccc---ccCcchhccCccc--ccceeeEcCCCcccCCCCCCCcccccccc
Q 013733 4 YKPQYEKVARLFNG-PNAAHPGIILMTRVDCAL---KINTNLCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRA 77 (437)
Q Consensus 4 faP~fekaA~~l~~-~~~~~~~~V~~akVDCa~---e~N~~lC~~f~V~--gYPTLklf~p~~~~~G~~~~~~~~~~i~~ 77 (437)
|+|+|+++|+.+++ .. .|.|++|||+. +.|+++|.+|+|+ +||||++|+ |... .+..
T Consensus 49 l~P~~e~lA~~~~~~~~-----~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~-----------~~~~ 111 (248)
T 2c0g_A 49 KHEAFTAFSKSAHKATK-----DLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK-GNAD-----------EYVQ 111 (248)
T ss_dssp HHHHHHHHHHHHHHHCS-----SEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSS-----------SEEE
T ss_pred cHHHHHHHHHHHhccCC-----CeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcC-----------ccee
Confidence 68999999999964 22 59999999997 2258999999999 999999996 5210 1235
Q ss_pred c--CCCCCHHHHHHHHHHhcccC
Q 013733 78 L--EDWQTADGLLTWINKQTSRS 98 (437)
Q Consensus 78 y--~g~Rtae~Iv~~i~k~l~~~ 98 (437)
| .|.|+.+.|.+||+++++..
T Consensus 112 y~~~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 112 LPSHVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp CCTTSCCCHHHHHHHHHHHSSCC
T ss_pred ecccCCCCHHHHHHHHHHhhccc
Confidence 7 79999999999999998743
No 15
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.73 E-value=7.4e-09 Score=104.48 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=60.6
Q ss_pred hHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHH
Q 013733 6 PQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTAD 85 (437)
Q Consensus 6 P~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae 85 (437)
|+|+++|+.+++. .|.+++|||+.+ +++|++|+|++|||+++|. +|. +..|.|.|+++
T Consensus 56 p~~e~~a~~~~~~------~v~~~~Vd~~~~--~~l~~~~~V~~~PTl~~f~-----~G~---------~~~y~G~~~~~ 113 (367)
T 3us3_A 56 LILELAAQVLEDK------GVGFGLVDSEKD--AAVAKKLGLTEEDSIYVFK-----EDE---------VIEYDGEFSAD 113 (367)
T ss_dssp HHHHHHHHHHTTT------TEEEEEEETTTT--HHHHHHHTCCSTTEEEEEE-----TTE---------EEECCSCCSHH
T ss_pred HHHHHHHHHhhcC------CceEEEEeCccc--HHHHHHcCCCcCceEEEEE-----CCc---------EEEeCCCCCHH
Confidence 7999999999863 499999999976 9999999999999999984 332 23688999999
Q ss_pred HHHHHHHHhccc
Q 013733 86 GLLTWINKQTSR 97 (437)
Q Consensus 86 ~Iv~~i~k~l~~ 97 (437)
.|++|+.+++++
T Consensus 114 ~i~~~i~~~~~~ 125 (367)
T 3us3_A 114 TLVEFLLDVLED 125 (367)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHhcCC
Confidence 999999999763
No 16
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.68 E-value=2.2e-08 Score=96.16 Aligned_cols=76 Identities=16% Similarity=0.310 Sum_probs=61.0
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEeccc---ccCcchhccCccc--ccceeeEcCCCcccCCCCCCCccccccccc
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KINTNLCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRAL 78 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~---e~N~~lC~~f~V~--gYPTLklf~p~~~~~G~~~~~~~~~~i~~y 78 (437)
|+|+|+++|+.+.+.. .|.|++|||+. ..|+++|.+|+|+ +|||+++|+.|.. . .+..|
T Consensus 38 l~P~~e~lA~~~~~~~-----~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~~----~-------~~~~y 101 (240)
T 2qc7_A 38 KQDEFKRLAENSASSD-----DLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDF----E-------NPVPY 101 (240)
T ss_dssp HHHHHHHHHHHHTTCT-----TEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTCS----S-------CCEEC
T ss_pred chHHHHHHHHHhcCCC-----CeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCCc----C-------cceee
Confidence 6899999999998632 59999999542 1359999999999 9999999964421 0 13468
Q ss_pred CCCCCHHHHHHHHHHhc
Q 013733 79 EDWQTADGLLTWINKQT 95 (437)
Q Consensus 79 ~g~Rtae~Iv~~i~k~l 95 (437)
.|.|+.+.|++||++.+
T Consensus 102 ~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 102 TGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CSCSCHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHhc
Confidence 89999999999999886
No 17
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.66 E-value=1.7e-08 Score=100.74 Aligned_cols=73 Identities=18% Similarity=0.119 Sum_probs=61.8
Q ss_pred CcchhH-------HHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCccccc
Q 013733 2 RNYKPQ-------YEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKE 74 (437)
Q Consensus 2 k~faP~-------fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~ 74 (437)
++++|+ |+++|+.+++. .|.+++|||+.+ .++|++|+|++|||+++|+. |.
T Consensus 43 ~~~~p~~~~~~~~~~~~a~~~~~~------~v~~~~Vd~~~~--~~l~~~~~v~~~Pt~~~~~~-----g~--------- 100 (350)
T 1sji_A 43 KVAQKQFQLKEIVLELVAQVLEHK------DIGFVMVDAKKE--AKLAKKLGFDEEGSLYVLKG-----DR--------- 100 (350)
T ss_dssp STTSHHHHHHHHHHHHHHHHGGGS------SEEEEEEETTTT--HHHHHHHTCCSTTEEEEEET-----TE---------
T ss_pred hhhCchhhhhhHHHHHHHHHHhhc------CcEEEEEeCCCC--HHHHHhcCCCccceEEEEEC-----Cc---------
Confidence 456677 99999999863 399999999986 89999999999999999843 32
Q ss_pred ccccCCCCCHHHHHHHHHHhcc
Q 013733 75 IRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 75 i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+..|.|.|+++.|++|+.++++
T Consensus 101 ~~~~~G~~~~~~l~~~i~~~~~ 122 (350)
T 1sji_A 101 TIEFDGEFAADVLVEFLLDLIE 122 (350)
T ss_dssp EEEECSCCCHHHHHHHHHTTSS
T ss_pred EEEecCCCCHHHHHHHHHHhcC
Confidence 2368899999999999998875
No 18
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.61 E-value=3.3e-08 Score=99.93 Aligned_cols=80 Identities=18% Similarity=0.429 Sum_probs=64.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCccccccc-ccCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIR-ALED 80 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~-~y~g 80 (437)
++++|+|+++|+.+++..+ ..+.|.+++|||+.+ .++|++|+|++|||+++|+ +|. .+. .|.|
T Consensus 38 ~~~~p~~~~~a~~~~~~~~-~~~~v~~~~Vd~~~~--~~l~~~~~v~~~Pt~~~f~-----~G~--------~~~~~~~G 101 (382)
T 2r2j_A 38 QMLHPIFEEASDVIKEEFP-NENQVVFARVDCDQH--SDIAQRYRISKYPTLKLFR-----NGM--------MMKREYRG 101 (382)
T ss_dssp HHHHHHHHHHHHHHTTCC----CCEEEEEEETTTC--HHHHHHTTCCEESEEEEEE-----TTE--------EEEEECCS
T ss_pred HHHHHHHHHHHHHHHhhcC-CCCceEEEEEECCcc--HHHHHhcCCCcCCEEEEEe-----CCc--------EeeeeecC
Confidence 5689999999999975321 013599999999976 8999999999999999984 332 122 4889
Q ss_pred CCCHHHHHHHHHHhccc
Q 013733 81 WQTADGLLTWINKQTSR 97 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l~~ 97 (437)
.|+++.|++|+.+++++
T Consensus 102 ~~~~~~l~~~i~~~~~~ 118 (382)
T 2r2j_A 102 QRSVKALADYIRQQKSD 118 (382)
T ss_dssp CCSHHHHHHHHHHHHSC
T ss_pred cchHHHHHHHHHHhccC
Confidence 99999999999999864
No 19
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.60 E-value=4e-08 Score=102.54 Aligned_cols=77 Identities=23% Similarity=0.388 Sum_probs=64.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
|+++|+|+++|+.+++. .|.+++|||+.+ .++|++|+|++|||+++|..| .. ..+..|.|.
T Consensus 47 ~~~~p~~~~~a~~~~~~------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~g-----~~------~~~~~~~G~ 107 (504)
T 2b5e_A 47 KNMAPEYVKAAETLVEK------NITLAQIDCTEN--QDLCMEHNIPGFPSLKIFKNS-----DV------NNSIDYEGP 107 (504)
T ss_dssp HHHHHHHHHHHHHTTTT------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEETT-----CT------TCEEECCSC
T ss_pred HHhHHHHHHHHHHhccC------CeEEEEEECCCC--HHHHHhcCCCcCCEEEEEeCC-----cc------ccceeecCC
Confidence 56899999999999863 399999999976 999999999999999998533 21 003468899
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
|+.+.|++|+.+++++
T Consensus 108 ~~~~~l~~~l~~~~~~ 123 (504)
T 2b5e_A 108 RTAEAIVQFMIKQSQP 123 (504)
T ss_dssp CSHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHhcCC
Confidence 9999999999999865
No 20
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.58 E-value=4.7e-08 Score=81.55 Aligned_cols=69 Identities=17% Similarity=0.387 Sum_probs=55.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.++|.|+++|+.+.+ +.+++|||+.+ +++|++|+|+++||+.+|. +|. .+..+.|
T Consensus 36 ~~~~p~~~~~~~~~~~--------~~~~~vd~d~~--~~l~~~~~V~~~PT~~~~~-----~G~--------~v~~~~G- 91 (105)
T 3zzx_A 36 KMIAPKLEELSQSMSD--------VVFLKVDVDEC--EDIAQDNQIACMPTFLFMK-----NGQ--------KLDSLSG- 91 (105)
T ss_dssp HHHHHHHHHHHHHCTT--------EEEEEEETTTC--HHHHHHTTCCBSSEEEEEE-----TTE--------EEEEEES-
T ss_pred cCCCcchhhhhhccCC--------eEEEEEecccC--HHHHHHcCCCeecEEEEEE-----CCE--------EEEEEeC-
Confidence 4689999999997753 88999999865 9999999999999999984 442 1334556
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
++.+.|.+||+++
T Consensus 92 ~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 92 ANYDKLLELVEKN 104 (105)
T ss_dssp CCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhc
Confidence 6899999999874
No 21
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.57 E-value=3.7e-08 Score=101.91 Aligned_cols=75 Identities=35% Similarity=0.643 Sum_probs=64.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
++++|+|+++|+.+++ .|.+++|||+.+ .++|++|+|++|||+++|+ +|. .+..|.|.
T Consensus 37 ~~~~p~~~~~a~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Ptl~~~~-----~g~--------~~~~~~G~ 94 (481)
T 3f8u_A 37 KRLAPEYEAAATRLKG-------IVPLAKVDCTAN--TNTCNKYGVSGYPTLKIFR-----DGE--------EAGAYDGP 94 (481)
T ss_dssp HHHHHHHHHHHHHTTT-------TCCEEEEETTTC--HHHHHHTTCCEESEEEEEE-----TTE--------EEEECCSC
T ss_pred HHhHHHHHHHHHHhcC-------ceEEEEEECCCC--HHHHHhcCCCCCCEEEEEe-----CCc--------eeeeecCc
Confidence 5789999999999986 499999999986 9999999999999999984 332 13568899
Q ss_pred CCHHHHHHHHHHhcccC
Q 013733 82 QTADGLLTWINKQTSRS 98 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~ 98 (437)
++++.|++|+.+++++.
T Consensus 95 ~~~~~l~~~~~~~~~~~ 111 (481)
T 3f8u_A 95 RTADGIVSHLKKQAGPA 111 (481)
T ss_dssp SSHHHHHHHHHHHTSCS
T ss_pred cCHHHHHHHHHhhcccC
Confidence 99999999999998753
No 22
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.57 E-value=5.6e-08 Score=95.62 Aligned_cols=88 Identities=18% Similarity=0.355 Sum_probs=66.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCccc---CCCCCCC--ccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFV---AGSWEPN--QEKKEIR 76 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~---~G~~~~~--~~~~~i~ 76 (437)
++++|+|+++|+.+.+ .+.|+.|||+...+.++|.+|+|++|||+++|.+|... .|.. +. .....+.
T Consensus 51 ~~~~p~~~~la~~~~~-------~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~-~~~~~~~~~~~ 122 (298)
T 3ed3_A 51 KKLSSTFRKAAKRLDG-------VVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDN-AKKSFSAHANE 122 (298)
T ss_dssp HHHHHHHHHHHHHTTT-------TSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC--------------CCCEEE
T ss_pred HHHHHHHHHHHHHccC-------CcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccc-cccccccccce
Confidence 5689999999999975 48999999997667999999999999999999765421 0100 00 0001245
Q ss_pred ccCCCCCHHHHHHHHHHhccc
Q 013733 77 ALEDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 77 ~y~g~Rtae~Iv~~i~k~l~~ 97 (437)
.|.|.|+++.|++|+.++++.
T Consensus 123 ~y~G~r~~~~i~~fl~~~~~~ 143 (298)
T 3ed3_A 123 VYSGARTLAPIVDFSLSRIRS 143 (298)
T ss_dssp ECCSCCSHHHHHHHHHTTCCC
T ss_pred eecCCcCHHHHHHHHHHhccc
Confidence 789999999999999998753
No 23
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.53 E-value=4.1e-08 Score=91.37 Aligned_cols=75 Identities=12% Similarity=0.003 Sum_probs=61.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.|.|+|+++|+.+.+. +.|.+++|||+.+ .++|++|+|++|||+++|+ +|. ....|.|.
T Consensus 41 ~~~~~~~~~~a~~~~~~-----~~v~~~~vd~~~~--~~l~~~~~v~~~Ptl~~~~-----~~~--------~~~~~~G~ 100 (229)
T 2ywm_A 41 EELLKETVEVIGEAVGQ-----DKIKLDIYSPFTH--KEETEKYGVDRVPTIVIEG-----DKD--------YGIRYIGL 100 (229)
T ss_dssp HHHHHHHHHHHHHHHCT-----TTEEEEEECTTTC--HHHHHHTTCCBSSEEEEES-----SSC--------CCEEEESC
T ss_pred HHHHHHHHHHHhccCCC-----CceEEEEecCccc--HHHHHHcCCCcCcEEEEEC-----CCc--------ccceecCC
Confidence 67899999999888542 2699999999976 9999999999999999984 121 12457899
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+|+.+.+.
T Consensus 101 ~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 101 PAGLEFTTLINGIFH 115 (229)
T ss_dssp CCTTHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHh
Confidence 999999999988653
No 24
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.51 E-value=1.3e-07 Score=77.68 Aligned_cols=79 Identities=20% Similarity=0.421 Sum_probs=63.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+++++++.+++.+ ..+.+++|||..+ .++|++|+|+++||+.+|+.| ... ....+.|.
T Consensus 40 ~~~~~~~~~~~~~~~~~~----~~v~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~g-----~~~------~~~~~~g~ 102 (120)
T 1mek_A 40 KALAPEYAKAAGKLKAEG----SEIRLAKVDATEE--SDLAQQYGVRGYPTIKFFRNG-----DTA------SPKEYTAG 102 (120)
T ss_dssp STTHHHHHHHHHTTTTTC----CCCBCEEEETTTC--CSSHHHHTCCSSSEEEEEESS-----CSS------SCEECCCC
T ss_pred HHhhHHHHHHHHHHhccC----CcEEEEEEcCCCC--HHHHHHCCCCcccEEEEEeCC-----CcC------CcccccCc
Confidence 678999999999987643 2599999999976 899999999999999998433 210 01356789
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
++.+.|.+|+++.+++
T Consensus 103 ~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 103 READDIVNWLKKRTGP 118 (120)
T ss_dssp SSHHHHHHHHHTTSCC
T ss_pred cCHHHHHHHHHhccCC
Confidence 9999999999988764
No 25
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.51 E-value=1.1e-07 Score=88.29 Aligned_cols=77 Identities=23% Similarity=0.402 Sum_probs=64.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++|+.+.+.. ..|.+++|||+.+ .++|++|+|++|||+++|. +|. ...|.|.
T Consensus 163 ~~~~p~~~~~a~~~~~~~----~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~g~---------~~~~~g~ 222 (241)
T 3idv_A 163 KKLAPEYEKAAKELSKRS----PPIPLAKVDATAE--TDLAKRFDVSGYPTLKIFR-----KGR---------PYDYNGP 222 (241)
T ss_dssp GGTHHHHHHHHHHHHTSS----SCCCEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE---------EEECCSC
T ss_pred HHhHHHHHHHHHHHhccC----CcEEEEEEECCCC--HHHHHHcCCcccCEEEEEE-----CCe---------EEEecCC
Confidence 578999999999997643 2599999999976 8999999999999999984 332 1238899
Q ss_pred CCHHHHHHHHHHhcccC
Q 013733 82 QTADGLLTWINKQTSRS 98 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~ 98 (437)
++.++|++||.+++++.
T Consensus 223 ~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 223 REKYGIVDYMIEQSGAA 239 (241)
T ss_dssp CSHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHhhhCCC
Confidence 99999999999998753
No 26
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.50 E-value=6.3e-08 Score=85.28 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=59.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceE--EEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIIL--MTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE 79 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~--~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~ 79 (437)
+.++|+|+++|+.+ + .+. |++||++.+ .+++.+|+|+++||+++|. +|.. +..+.
T Consensus 52 ~~l~P~l~~la~~~-~-------~v~~~~~~Vd~d~~--~~la~~~~V~~iPT~~~fk-----~G~~--------v~~~~ 108 (142)
T 2es7_A 52 SDNPVMIAELLREF-P-------QFDWQVAVADLEQS--EAIGDRFNVRRFPATLVFT-----DGKL--------RGALS 108 (142)
T ss_dssp CCHHHHHHHHHHTC-T-------TSCCEEEEECHHHH--HHHHHTTTCCSSSEEEEES-----CC------------CEE
T ss_pred HHHHHHHHHHHHHh-c-------ccceeEEEEECCCC--HHHHHhcCCCcCCeEEEEe-----CCEE--------EEEEe
Confidence 57899999999988 4 377 999999976 8999999999999999984 3431 33467
Q ss_pred CCCCHHHHHHHHHHhcccC
Q 013733 80 DWQTADGLLTWINKQTSRS 98 (437)
Q Consensus 80 g~Rtae~Iv~~i~k~l~~~ 98 (437)
|.++.+.|.+||++.+...
T Consensus 109 G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 109 GIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp SCCCHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHhccc
Confidence 8899999999999987643
No 27
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.49 E-value=2.2e-07 Score=79.39 Aligned_cols=80 Identities=19% Similarity=0.385 Sum_probs=65.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++++.+++.+ ..|.+++|||+.+ .++|++|+|+++||+++|. +|. +..|.|.
T Consensus 50 ~~~~p~~~~~~~~~~~~~----~~v~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~---------~~~~~g~ 109 (140)
T 2dj1_A 50 KQFAPEYEKIASTLKDND----PPIAVAKIDATSA--SMLASKFDVSGYPTIKILK-----KGQ---------AVDYDGS 109 (140)
T ss_dssp HTTHHHHHHHHHHHHSSS----SCCEEEEECTTTC--HHHHHHTTCCSSSEEEEEE-----TTE---------EEECCSC
T ss_pred HHhhHHHHHHHHHHhccC----CceEEEEEeCccc--HHHHHHCCCCccCeEEEEE-----CCc---------EEEcCCC
Confidence 578999999999997643 2499999999976 8999999999999999984 221 2356789
Q ss_pred CCHHHHHHHHHHhcccCCCC
Q 013733 82 QTADGLLTWINKQTSRSYGL 101 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~~~l 101 (437)
++.+.|.+||++.++....-
T Consensus 110 ~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 110 RTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp CCHHHHHHHHHHHHSSSCCC
T ss_pred CCHHHHHHHHHHhcCCCCCC
Confidence 99999999999998765443
No 28
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.49 E-value=1.2e-07 Score=77.26 Aligned_cols=74 Identities=24% Similarity=0.435 Sum_probs=60.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.|+++|+.+.... ..+.+++|||+.+ .++|++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 37 ~~~~~~~~~~~~~~~~~~----~~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~g~--------~~~~~~g~ 97 (111)
T 3uvt_A 37 KTLAPTWEELSKKEFPGL----AGVKIAEVDCTAE--RNICSKYSVRGYPTLLLFR-----GGK--------KVSEHSGG 97 (111)
T ss_dssp HHHHHHHHHHHTCCCCC-----CCEEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEECSC
T ss_pred HHhhHHHHHHHHHhhccC----CceEEEEEecccc--HhHHHhcCCCcccEEEEEe-----CCc--------EEEeccCC
Confidence 467899999999876542 2599999999976 8999999999999999984 332 13456789
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
++.+.|.+||+++
T Consensus 98 ~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 98 RDLDSLHRFVLSQ 110 (111)
T ss_dssp CSHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhc
Confidence 9999999999875
No 29
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.46 E-value=3.6e-07 Score=77.29 Aligned_cols=80 Identities=13% Similarity=0.353 Sum_probs=62.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC-C
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-D 80 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~-g 80 (437)
+.+.|.|+++|+.+++.. .+.+++|||+.+ ..++.+|+|+++||+++|.++.. . ....|. |
T Consensus 41 ~~~~p~~~~~~~~~~~~~-----~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~g~~----~-------~~~~~~gg 102 (133)
T 2dj3_A 41 KQLEPIYTSLGKKYKGQK-----DLVIAKMDATAN--DITNDQYKVEGFPTIYFAPSGDK----K-------NPIKFEGG 102 (133)
T ss_dssp HHHHHHHHHHHHHHTTSS-----SEEEEEECTTTS--CCCCSSCCCSSSSEEEEECTTCT----T-------SCEECCSS
T ss_pred HHHHHHHHHHHHHhcCCC-----CEEEEEecCCcC--HHHHhhcCCCcCCEEEEEeCCCc----c-------cceEecCC
Confidence 468899999999998532 599999999976 89999999999999999854321 0 011355 5
Q ss_pred CCCHHHHHHHHHHhcccCC
Q 013733 81 WQTADGLLTWINKQTSRSY 99 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l~~~~ 99 (437)
.++.+.|.+||++.+....
T Consensus 103 ~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 103 NRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp CCSTTHHHHHHHHHSSSCS
T ss_pred CcCHHHHHHHHHHhccccc
Confidence 5899999999999987553
No 30
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.43 E-value=3e-07 Score=77.52 Aligned_cols=74 Identities=12% Similarity=0.246 Sum_probs=61.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+++++++.+.+ .+.+++|||+.+ .++|++|+|+++||+++|.++. . .+..|.|.
T Consensus 51 ~~~~~~~~~~~~~~~~-------~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~~~----~--------~~~~~~G~ 109 (130)
T 2dml_A 51 QRLTPEWKKAATALKD-------VVKVGAVNADKH--QSLGGQYGVQGFPTIKIFGANK----N--------KPEDYQGG 109 (130)
T ss_dssp GGGHHHHHHHHHHTTT-------TSEEEEEETTTC--HHHHHHHTCCSSSEEEEESSCT----T--------SCEECCSC
T ss_pred HhhCHHHHHHHHHhcC-------ceEEEEEeCCCC--HHHHHHcCCCccCEEEEEeCCC----C--------eEEEeecC
Confidence 5789999999998875 499999999975 8999999999999999985331 1 13356789
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|++|+.+.+.
T Consensus 110 ~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 110 RTGEAIVDAALSALR 124 (130)
T ss_dssp CSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999998874
No 31
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.43 E-value=1.9e-07 Score=76.17 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=60.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.+++|||+.+ .++|++|+|+++||+.+|. +|. .+..+.|.
T Consensus 38 ~~~~~~~~~~~~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~g~--------~~~~~~g~ 95 (111)
T 3gnj_A 38 QKVTPVLEELRLNYEE-------SFGFYYVDVEEE--KTLFQRFSLKGVPQILYFK-----DGE--------YKGKMAGD 95 (111)
T ss_dssp HHHHHHHHHHHHHTTT-------TSEEEEEETTTC--HHHHHHTTCCSSCEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHcCC-------ceEEEEEECCcC--hhHHHhcCCCcCCEEEEEE-----CCE--------EEEEEecc
Confidence 4688999999999875 499999999975 8999999999999999984 332 13356788
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+||++.++
T Consensus 96 ~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 96 VEDDEVEQMIADVLE 110 (111)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999998764
No 32
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=1.8e-07 Score=78.83 Aligned_cols=78 Identities=13% Similarity=0.242 Sum_probs=62.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.|+++|+.++... .+.+.+++|||+.+ .++|++|+|+++||+++|.+|. .+..|.|.
T Consensus 41 ~~~~~~~~~~~~~~~~~~---~~~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~g~-------------~~~~~~G~ 102 (133)
T 1x5d_A 41 KNLEPEWAAAASEVKEQT---KGKVKLAAVDATVN--QVLASRYGIRGFPTIKIFQKGE-------------SPVDYDGG 102 (133)
T ss_dssp HTHHHHHHHHHHHHHHHT---TTSEEEEEEETTTC--CHHHHHHTCCSSSEEEEEETTE-------------EEEEECSC
T ss_pred HhhcHHHHHHHHHHHhhc---CCcEEEEEEECCCC--HHHHHhCCCCeeCeEEEEeCCC-------------ceEEecCC
Confidence 468999999999987210 01599999999975 8999999999999999985331 13457789
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
++.+.|.+|+.+.+..
T Consensus 103 ~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 103 RTRSDIVSRALDLFSD 118 (133)
T ss_dssp CSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhc
Confidence 9999999999998764
No 33
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.41 E-value=2.2e-07 Score=82.25 Aligned_cols=74 Identities=15% Similarity=0.330 Sum_probs=61.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++|+.+.+ .+.|++|||+.+ .+++.+|+|+++||+.+|. +|. .+..+.|.
T Consensus 80 ~~~~p~l~~la~~~~~-------~v~~~~vd~~~~--~~l~~~~~i~~~Pt~~~~~-----~G~--------~~~~~~G~ 137 (155)
T 2ppt_A 80 RQMAPQFQAAAATLAG-------QVRLAKIDTQAH--PAVAGRHRIQGIPAFILFH-----KGR--------ELARAAGA 137 (155)
T ss_dssp HHHHHHHHHHHHHHTT-------TCEEEEEETTTS--THHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHccC-------CEEEEEEeCCcc--HHHHHHcCCCcCCEEEEEe-----CCe--------EEEEecCC
Confidence 4689999999999975 499999999976 8999999999999999984 332 13346788
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
.+.+.|.+||++.++.
T Consensus 138 ~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 138 RPASELVGFVRGKLGA 153 (155)
T ss_dssp CCHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHhcc
Confidence 9999999999998763
No 34
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.41 E-value=3.8e-07 Score=75.41 Aligned_cols=76 Identities=16% Similarity=0.257 Sum_probs=62.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+++++++.+++ .+.++.|||+.+ .++|++|+|.++||+.+|. +|. .+..+.|.
T Consensus 33 ~~~~~~l~~~~~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 90 (112)
T 2voc_A 33 KMIAPVLEELDQEMGD-------KLKIVKIDVDEN--QETAGKYGVMSIPTLLVLK-----DGE--------VVETSVGF 90 (112)
T ss_dssp GGHHHHHHHHHHHHTT-------TCEEEEEETTTC--CSHHHHTTCCSBSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhCC-------CcEEEEEECCCC--HHHHHHcCCCcccEEEEEe-----CCE--------EEEEEeCC
Confidence 5689999999999875 499999999976 8999999999999999983 332 13346789
Q ss_pred CCHHHHHHHHHHhcccCC
Q 013733 82 QTADGLLTWINKQTSRSY 99 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~~ 99 (437)
++.+.|.+|+.+.+++..
T Consensus 91 ~~~~~l~~~l~~~~~~~~ 108 (112)
T 2voc_A 91 KPKEALQELVNKHLLEHH 108 (112)
T ss_dssp CCHHHHHHHHHTTSCSCC
T ss_pred CCHHHHHHHHHHHHHhhc
Confidence 999999999998876543
No 35
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.41 E-value=3e-07 Score=86.79 Aligned_cols=85 Identities=14% Similarity=0.269 Sum_probs=65.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
++++|+|+++|+.+.+.+ ..+.+++|||+.+.|.++|++|+|++|||+++|.++... |.. . ...+.|
T Consensus 46 ~~~~p~~~~l~~~~~~~~----~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~-~~g------~-~~~~~g- 112 (244)
T 3q6o_A 46 IAFAPTWXALAEDVKAWR----PALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXN-GSG------A-VFPVAG- 112 (244)
T ss_dssp HHHHHHHHHHHHHTGGGT----TTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCS-SSC------E-ECCCTT-
T ss_pred HHHHHHHHHHHHHHHhcc----CcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcC-CCC------e-eEecCC-
Confidence 568999999999998632 259999999977677999999999999999999755321 110 1 113445
Q ss_pred CCHHHHHHHHHHhcccCC
Q 013733 82 QTADGLLTWINKQTSRSY 99 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~~ 99 (437)
++.+.|.++|.+.+....
T Consensus 113 ~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 113 ADVQTLRERLIDALESHH 130 (244)
T ss_dssp CCHHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHhcc
Confidence 799999999999886443
No 36
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.40 E-value=2.3e-07 Score=101.86 Aligned_cols=75 Identities=16% Similarity=0.351 Sum_probs=56.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
++++|+|+++|+.+.+ .|.+++|||+.+ .++|++|+|++|||+++|+.| . .+..|.|.
T Consensus 149 ~~~~p~~~~~a~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~g-----~--------~~~~~~G~ 206 (780)
T 3apo_A 149 HDLAPTWREFAKEVDG-------LLRIGAVNCGDD--RMLCRMKGVNSYPSLFIFRSG-----M--------AAVKYNGD 206 (780)
T ss_dssp HHHHHHHHHHHHHTTT-------TSEEEEEETTTC--SSCC--------CEEEEECTT-----S--------CCEECCSC
T ss_pred hHhhHHHHHHHHHhcC-------ceEEEEEeCCCc--HHHHHHcCCceeeeEEEEeCC-----c--------EeeEecCC
Confidence 5689999999999875 499999999976 899999999999999998533 2 13468899
Q ss_pred CCHHHHHHHHHHhcccC
Q 013733 82 QTADGLLTWINKQTSRS 98 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~ 98 (437)
++++.|++|+.++++..
T Consensus 207 ~~~~~l~~~l~~~~~~~ 223 (780)
T 3apo_A 207 RSKESLVAFAMQHVRST 223 (780)
T ss_dssp SCHHHHHHHHHTTSCCC
T ss_pred CCHHHHHHHHHHhchhh
Confidence 99999999999998653
No 37
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.38 E-value=3.3e-07 Score=79.51 Aligned_cols=74 Identities=20% Similarity=0.394 Sum_probs=62.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++++.+++ .+.+++||++.+ .+++++|+|+++||+.+|. +|. .+..+.|.
T Consensus 71 ~~~~p~l~~~~~~~~~-------~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 128 (148)
T 3p2a_A 71 RSFAPIFAETAAERAG-------KVRFVKVNTEAE--PALSTRFRIRSIPTIMLYR-----NGK--------MIDMLNGA 128 (148)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEESSC
T ss_pred HHHHHHHHHHHHHcCC-------ceEEEEEECcCC--HHHHHHCCCCccCEEEEEE-----CCe--------EEEEEeCC
Confidence 4678999999999875 499999999976 8999999999999999983 332 23457799
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
++.+.|.+||++.++.
T Consensus 129 ~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 129 VPKAPFDNWLDEQLSR 144 (148)
T ss_dssp CCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHhcc
Confidence 9999999999998764
No 38
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=3.1e-07 Score=77.23 Aligned_cols=74 Identities=18% Similarity=0.363 Sum_probs=61.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+++++|+.+.+. .+.+++|||+.+ .++|++|+|+++||+++|+ +|. +..+.|.
T Consensus 38 ~~~~p~~~~~~~~~~~~------~v~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~---------~~~~~G~ 95 (126)
T 1x5e_A 38 QNLQPEWESFAEWGEDL------EVNIAKVDVTEQ--PGLSGRFIINALPTIYHCK-----DGE---------FRRYQGP 95 (126)
T ss_dssp HHHHHHHHHHHHHHGGG------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE---------EEECCSC
T ss_pred HHHhHHHHHHHHHhccC------CeEEEEEECcCC--HHHHHHcCCcccCEEEEEe-----CCe---------EEEeecC
Confidence 46889999999988753 499999999975 8999999999999999983 332 2356789
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
++.+.|.+||++.+..
T Consensus 96 ~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 96 RTKKDFINFISDKEWK 111 (126)
T ss_dssp CCHHHHHHHHHTCGGG
T ss_pred CCHHHHHHHHHHHhhc
Confidence 9999999999988754
No 39
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.36 E-value=4.7e-07 Score=73.53 Aligned_cols=72 Identities=13% Similarity=0.238 Sum_probs=59.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+++ .+.+++|||+.+ .++|++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 36 ~~~~~~l~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 93 (108)
T 2trx_A 36 KMIAPILDEIADEYQG-------KLTVAKLNIDQN--PGTAPKYGIRGIPTLLLFK-----NGE--------VAATKVGA 93 (108)
T ss_dssp HHHHHHHHHHHHHTTT-------TEEEEEEETTTC--TTHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhCC-------CcEEEEEECCCC--HHHHHHcCCcccCEEEEEe-----CCE--------EEEEEecC
Confidence 4678999999998875 499999999975 8999999999999999983 332 12345688
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.+|+++.+
T Consensus 94 ~~~~~l~~~l~~~l 107 (108)
T 2trx_A 94 LSKGQLKEFLDANL 107 (108)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh
Confidence 89999999998865
No 40
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.35 E-value=1e-07 Score=84.50 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=60.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcc-eEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGI-ILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED 80 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~-V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g 80 (437)
|.++|+++++|+.+.+ + |+|++||.+.+ ++++.+|+|++.|||.+| ++|. .+....|
T Consensus 52 k~iaPvleela~e~~g-------~~v~~~KVdvDe~--~~lA~~ygV~sIPTlilF-----k~G~--------~v~~~~G 109 (140)
T 2qgv_A 52 SDNPVMIGELLHEFPD-------YTWQVAIADLEQS--EAIGDRFGAFRFPATLVF-----TGGN--------YRGVLNG 109 (140)
T ss_dssp THHHHHHHHHHTTCTT-------SCCEEEECCHHHH--HHHHHHHTCCSSSEEEEE-----ETTE--------EEEEEES
T ss_pred HHHHhHHHHHHHHcCC-------CeEEEEEEECCCC--HHHHHHcCCccCCEEEEE-----ECCE--------EEEEEec
Confidence 4689999999998875 6 99999998865 999999999999999998 3443 2334568
Q ss_pred CCCHHHHHHHHHHhc
Q 013733 81 WQTADGLLTWINKQT 95 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l 95 (437)
.++.+.|.+||++.+
T Consensus 110 ~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 110 IHPWAELINLMRGLV 124 (140)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 899999999999887
No 41
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.35 E-value=6e-07 Score=89.26 Aligned_cols=75 Identities=15% Similarity=0.343 Sum_probs=61.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
++++|+|+++|+.+++.. .|.+++|||+.+ . |.+|+|++|||+++|+++. |. .+..|.|.
T Consensus 283 ~~~~p~~~~la~~~~~~~-----~v~~~~vd~~~~--~--~~~~~v~~~Pt~~~~~~~~---~~--------~~~~~~G~ 342 (361)
T 3uem_A 283 KQLAPIWDKLGETYKDHE-----NIVIAKMDSTAN--E--VEAVKVHSFPTLKFFPASA---DR--------TVIDYNGE 342 (361)
T ss_dssp HHHHHHHHHHHHHTTTCS-----SEEEEEEETTTC--B--CSSCCCCSSSEEEEECSSS---SC--------CCEECCSC
T ss_pred HHHHHHHHHHHHHhccCC-----cEEEEEEECCcc--c--hhhcCCcccCeEEEEECCC---Cc--------ceeEecCC
Confidence 468999999999998743 599999999976 3 8999999999999996441 11 13468899
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.++|++||+++.+
T Consensus 343 ~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 343 RTLDGFKKFLESGGQ 357 (361)
T ss_dssp SSHHHHHHHHTTTSC
T ss_pred CCHHHHHHHHHhcCC
Confidence 999999999988754
No 42
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.34 E-value=2.4e-07 Score=78.72 Aligned_cols=72 Identities=13% Similarity=0.238 Sum_probs=54.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.|+++++.+.+ .+.+++|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 51 ~~~~p~~~~l~~~~~~-------~~~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 108 (123)
T 1oaz_A 51 KMIAPILDEIADEYQG-------KLTVAKLNIDQN--PGTAPKYGIRGIPTLLLFK-----NGE--------VAATKVGA 108 (123)
T ss_dssp CTTHHHHTTC--------------CEEEEEETTSC--TTTGGGGTCCBSSEEEEEE-----SSS--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhcC-------CeEEEEEECCCC--HHHHHHcCCCccCEEEEEE-----CCE--------EEEEEeCC
Confidence 5789999999987764 499999999976 8999999999999999983 332 13346788
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+||++.+
T Consensus 109 ~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 109 LSKGQLKEFLDANL 122 (123)
T ss_dssp CCHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999998765
No 43
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.34 E-value=4.5e-07 Score=73.08 Aligned_cols=72 Identities=18% Similarity=0.293 Sum_probs=59.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|+++||+.+|. +|. .+..+.|.
T Consensus 35 ~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~g~ 92 (106)
T 3die_A 35 KMIAPVLEELAADYEG-------KADILKLDVDEN--PSTAAKYEVMSIPTLIVFK-----DGQ--------PVDKVVGF 92 (106)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHTTCCSBSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHhHHHHHHHHHhcC-------CcEEEEEECCcC--HHHHHhCCCcccCEEEEEe-----CCe--------EEEEEeCC
Confidence 4678999999999875 499999999876 8999999999999999984 332 13356788
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+|+++.+
T Consensus 93 ~~~~~l~~~l~~~l 106 (106)
T 3die_A 93 QPKENLAEVLDKHL 106 (106)
T ss_dssp CCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhC
Confidence 99999999998753
No 44
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.32 E-value=5.9e-07 Score=83.40 Aligned_cols=77 Identities=19% Similarity=0.440 Sum_probs=63.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++|+.+++.+ ..|.+++|||+.+ .++|++|+|++|||+++|.. |. .+ .|.|.
T Consensus 48 ~~~~p~~~~~~~~~~~~~----~~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~-----g~--------~~-~~~g~ 107 (241)
T 3idv_A 48 KQFAPEYEKIANILKDKD----PPIPVAKIDATSA--SVLASRFDVSGYPTIKILKK-----GQ--------AV-DYEGS 107 (241)
T ss_dssp HHHHHHHHHHHHHHHTSS----SCCCEEEEETTTC--HHHHHHTTCCSSSEEEEEET-----TE--------EE-ECCSC
T ss_pred HHhhHHHHHHHHHHhhcC----CceEEEEEeccCC--HHHHHhcCCCcCCEEEEEcC-----CC--------cc-cccCc
Confidence 468899999999998753 2599999999976 89999999999999999842 22 12 47899
Q ss_pred CCHHHHHHHHHHhcccC
Q 013733 82 QTADGLLTWINKQTSRS 98 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~ 98 (437)
++.+.|.+|+.+.+...
T Consensus 108 ~~~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 108 RTQEEIVAKVREVSQPD 124 (241)
T ss_dssp SCHHHHHHHHHHHHSTT
T ss_pred ccHHHHHHHHhhccCcc
Confidence 99999999999987643
No 45
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.32 E-value=5.6e-07 Score=72.72 Aligned_cols=72 Identities=28% Similarity=0.381 Sum_probs=59.7
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 37 ~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~i~~~Pt~~~~~-----~g~--------~~~~~~g~ 94 (109)
T 3tco_A 37 HLYEPIYKKVAEKYKG-------KAVFGRLNVDEN--QKIADKYSVLNIPTTLIFV-----NGQ--------LVDSLVGA 94 (109)
T ss_dssp HHHHHHHHHHHHHTTT-------TSEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HhhhHHHHHHHHHhCC-------CceEEEEccccC--HHHHHhcCcccCCEEEEEc-----CCc--------EEEeeecc
Confidence 4578999999999875 499999999976 9999999999999999984 332 13346788
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+||++.+
T Consensus 95 ~~~~~l~~~l~~~l 108 (109)
T 3tco_A 95 VDEDTLESTVNKYL 108 (109)
T ss_dssp CCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999998865
No 46
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.31 E-value=6.2e-07 Score=73.33 Aligned_cols=73 Identities=14% Similarity=0.229 Sum_probs=60.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||..+ .++|++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 41 ~~~~~~l~~~~~~~~~-------~v~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~g~ 98 (115)
T 1thx_A 41 QLMSPLINLAANTYSD-------RLKVVKLEIDPN--PTTVKKYKVEGVPALRLVK-----GEQ--------ILDSTEGV 98 (115)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEESTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHhHHHHHHHHHHhCC-------cEEEEEEEcCCC--HHHHHHcCCCceeEEEEEc-----CCE--------EEEEecCC
Confidence 4578999999998875 499999999975 8999999999999999983 332 12346688
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+|+++.++
T Consensus 99 ~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 99 ISKDKLLSFLDTHLN 113 (115)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999998775
No 47
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.31 E-value=2.6e-07 Score=81.51 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=60.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
|.++|+++++|+.+.+ +|+|++||-+.+ ++++.+|+|++.|||.+| ++|. .+....|.
T Consensus 51 k~iaPvleela~e~~~-------~v~~~KVdvDe~--~~la~~ygV~siPTlilF-----kdG~--------~v~~~vG~ 108 (137)
T 2qsi_A 51 ADLAVVLPELINAFPG-------RLVAAEVAAEAE--RGLMARFGVAVCPSLAVV-----QPER--------TLGVIAKI 108 (137)
T ss_dssp HHHHHHHHHHHHTSTT-------TEEEEEECGGGH--HHHHHHHTCCSSSEEEEE-----ECCE--------EEEEEESC
T ss_pred hhHHhHHHHHHHHccC-------CcEEEEEECCCC--HHHHHHcCCccCCEEEEE-----ECCE--------EEEEEeCC
Confidence 3489999999999875 599999997765 999999999999999998 4443 23445688
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+||++.+
T Consensus 109 ~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 109 QDWSSYLAQIGAML 122 (137)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999998877
No 48
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.31 E-value=7.4e-07 Score=82.28 Aligned_cols=74 Identities=18% Similarity=0.377 Sum_probs=62.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++|+.+++ .|.+++|||+.+ .++|.+|+|+++||+.+|+. |. .+..+.|.
T Consensus 130 ~~~~p~~~~l~~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~-----G~--------~~~~~~G~ 187 (210)
T 3apq_A 130 HDLAPTWREFAKEVDG-------LLRIGAVNCGDD--RMLCRMKGVNSYPSLFIFRS-----GM--------AAVKYNGD 187 (210)
T ss_dssp HHHHHHHHHHHHHTBT-------TBEEEEEETTTC--HHHHHHTTCCSSSEEEEECT-----TS--------CCEECCSC
T ss_pred HHHHHHHHHHHHHhcC-------ceEEEEEECCcc--HHHHHHcCCCcCCeEEEEEC-----CC--------ceeEecCC
Confidence 4678999999999865 599999999976 89999999999999999843 32 13457788
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
++.+.|.+||.+.++.
T Consensus 188 ~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 188 RSKESLVAFAMQHVRS 203 (210)
T ss_dssp CCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCcc
Confidence 9999999999998764
No 49
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.30 E-value=7.8e-07 Score=75.90 Aligned_cols=72 Identities=13% Similarity=0.238 Sum_probs=59.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.+++|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 56 ~~~~p~l~~l~~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 113 (128)
T 2o8v_B 56 KMIAPILDEIADEYQG-------KLTVAKLNIDQN--PGTAPKYGIRGIPTLLLFK-----NGE--------VAATKVGA 113 (128)
T ss_dssp HHTHHHHHHHHHHTTT-------TEEEEEEETTTC--CTTSGGGTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHhHHHHHHHHHhcC-------CeEEEEEECCCC--HHHHHHcCCCccCEEEEEe-----CCE--------EEEEEcCC
Confidence 4689999999998875 499999999975 8999999999999999983 332 12346688
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+||++.+
T Consensus 114 ~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 114 LSKGQLKEFLDANL 127 (128)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh
Confidence 99999999998865
No 50
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.30 E-value=6.9e-07 Score=72.09 Aligned_cols=71 Identities=15% Similarity=0.294 Sum_probs=58.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 36 ~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 93 (107)
T 2i4a_A 36 KMIGPALGEIGKEFAG-------KVTVAKVNIDDN--PETPNAYQVRSIPTLMLVR-----DGK--------VIDKKVGA 93 (107)
T ss_dssp HHHHHHHHHHHHHHTT-------SEEEEEEETTTC--CHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHhHHHHHHHHHhCC-------cEEEEEEECCCC--HHHHHhcCCCccCEEEEEe-----CCE--------EEEEecCC
Confidence 4578999999999875 499999999875 8999999999999999984 332 12346688
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
++.+.|.+|+++.
T Consensus 94 ~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 94 LPKSQLKAWVESA 106 (107)
T ss_dssp CCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhc
Confidence 9999999999875
No 51
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.28 E-value=5.8e-07 Score=73.27 Aligned_cols=71 Identities=14% Similarity=0.072 Sum_probs=49.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++|+.+. .+.+++|||+.+ .+++.+|+|+++||+.+|. +|. .+..+.|.
T Consensus 34 ~~~~p~~~~~~~~~~--------~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~g~ 90 (105)
T 4euy_A 34 DVMLRKVNYVLENYN--------YVEKIEILLQDM--QEIAGRYAVFTGPTVLLFY-----NGK--------EILRESRF 90 (105)
T ss_dssp HHHHHHHHHHHHTCT--------TEEEEEEEECCC-----------CCCCEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHcC--------CceEEEEECCCC--HHHHHhcCCCCCCEEEEEe-----CCe--------EEEEEeCC
Confidence 467899999999773 399999999975 8999999999999999984 332 13345688
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+++++.+
T Consensus 91 ~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 91 ISLENLERTIQLFE 104 (105)
T ss_dssp CCHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHhh
Confidence 99999999998754
No 52
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.28 E-value=3.9e-07 Score=78.68 Aligned_cols=73 Identities=14% Similarity=0.194 Sum_probs=61.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++|+.+.+ .+.+++|||+.+ .++|++|+|+++||+.+|. +|. .+..+.|.
T Consensus 40 ~~~~~~l~~l~~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 97 (140)
T 3hz4_A 40 KAMEPYFEEYAKEYGS-------SAVFGRINIATN--PWTAEKYGVQGTPTFKFFC-----HGR--------PVWEQVGQ 97 (140)
T ss_dssp HHHHHHHHHHHHHHTT-------TSEEEEEETTTC--HHHHHHHTCCEESEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHhCC-------ceEEEEEECCcC--HhHHHHCCCCcCCEEEEEe-----CCc--------EEEEEcCC
Confidence 4688999999999875 499999999976 9999999999999999984 332 13456788
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+||++.+.
T Consensus 98 ~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 98 IYPSILKNAVRDMLQ 112 (140)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999988875
No 53
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.28 E-value=7.2e-07 Score=71.93 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=59.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 34 ~~~~~~l~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~g~--------~~~~~~g~ 91 (109)
T 2yzu_A 34 RMIAPILEEIAKEYEG-------KLLVAKLDVDEN--PKTAMRYRVMSIPTVILFK-----DGQ--------PVEVLVGA 91 (109)
T ss_dssp HHHHHHHHHHHHHTBT-------TBEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHhhHHHHHHHHHhhC-------ceEEEEEECCCC--HhHHHhCCCCcCCEEEEEe-----CCc--------EeeeEeCC
Confidence 4578999999998875 499999999975 8999999999999999983 332 12346688
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
.+.+.|.+|+++.++.
T Consensus 92 ~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 92 QPKRNYQAKIEKHLPA 107 (109)
T ss_dssp CCHHHHHHHHHTTC--
T ss_pred CCHHHHHHHHHHHhhh
Confidence 9999999999988754
No 54
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.28 E-value=9.6e-07 Score=75.54 Aligned_cols=73 Identities=16% Similarity=0.287 Sum_probs=60.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .++|++|+|+++||+.+|.+ +|. +..+.|.
T Consensus 67 ~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~~----~g~---------~~~~~G~ 124 (141)
T 3hxs_A 67 KMVAPILEELSKEYAG-------KIYIYKVNVDKE--PELARDFGIQSIPTIWFVPM----KGE---------PQVNMGA 124 (141)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEECS----SSC---------CEEEESC
T ss_pred HHHHHHHHHHHHHhcC-------ceEEEEEECCCC--HHHHHHcCCCCcCEEEEEeC----CCC---------EEEEeCC
Confidence 4678999999999875 499999999976 89999999999999999842 222 2256788
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
.+.+.|.+||++.+.
T Consensus 125 ~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 125 LSKEQLKGYIDKVLL 139 (141)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHc
Confidence 999999999998775
No 55
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.27 E-value=2.1e-06 Score=71.11 Aligned_cols=78 Identities=14% Similarity=0.331 Sum_probs=58.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++|+.+++.+ ....+.+++|||+.+ .+++ +|++|||+.+|.++. .. .+..+.|.
T Consensus 41 ~~~~p~~~~~~~~~~~~~--~~~~v~~~~vd~~~~---~~~~--~v~~~Pt~~~~~~~~----~~-------~~~~~~G~ 102 (121)
T 2djj_A 41 KALAPKYEELGALYAKSE--FKDRVVIAKVDATAN---DVPD--EIQGFPTIKLYPAGA----KG-------QPVTYSGS 102 (121)
T ss_dssp HHHHHHHHHHHHHHTTSS--CTTSSEEEEEETTTS---CCSS--CCSSSSEEEEECSSC----TT-------SCCCCCCC
T ss_pred HHhhHHHHHHHHHHhhcc--cCCceEEEEEECccc---cccc--ccCcCCeEEEEeCcC----CC-------CceEecCC
Confidence 468999999999998621 001599999999975 3776 999999999985431 10 02346789
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
++.+.|.+||++.++.
T Consensus 103 ~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 103 RTVEDLIKFIAENGKY 118 (121)
T ss_dssp SCHHHHHHHHHHTSSS
T ss_pred CCHHHHHHHHHhccCc
Confidence 9999999999988753
No 56
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.25 E-value=5.9e-07 Score=76.10 Aligned_cols=70 Identities=19% Similarity=0.347 Sum_probs=58.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+++++++.+++ .+.+++|||+.+ .+++++|+|+++||+.+|. +|. .+..+.|.
T Consensus 58 ~~~~p~l~~~~~~~~~-------~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 115 (128)
T 3ul3_B 58 TMQSTEMDKLQKYYGK-------RIYLLKVDLDKN--ESLARKFSVKSLPTIILLK-----NKT--------MLARKDHF 115 (128)
T ss_dssp HHHHHHHHHHHHHHGG-------GEEEEEEEGGGC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEESSC
T ss_pred HHHhHHHHHHHHHhcC-------CeEEEEEECCCC--HHHHHHcCCCCcCEEEEEE-----CCE--------EEEEecCC
Confidence 4688999999999874 599999999976 8999999999999999983 332 23456788
Q ss_pred CCHHHHHHHHHH
Q 013733 82 QTADGLLTWINK 93 (437)
Q Consensus 82 Rtae~Iv~~i~k 93 (437)
++.+.|.+||++
T Consensus 116 ~~~~~l~~~l~~ 127 (128)
T 3ul3_B 116 VSSNDLIALIKK 127 (128)
T ss_dssp CCHHHHHHHHTT
T ss_pred CCHHHHHHHHHh
Confidence 999999999865
No 57
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.24 E-value=1.6e-06 Score=74.26 Aligned_cols=78 Identities=17% Similarity=0.303 Sum_probs=62.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.+++|||+.+ .++|++|+|+++||+.+|. .+|. +..+.|.
T Consensus 54 ~~~~~~l~~l~~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~----~~G~---------~~~~~G~ 111 (136)
T 2l5l_A 54 KMVAPILDELAKEYDG-------QIVIYKVDTEKE--QELAGAFGIRSIPSILFIP----MEGK---------PEMAQGA 111 (136)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHTTCCSSCEEEEEC----SSSC---------CEEEESC
T ss_pred HHHHHHHHHHHHHhcC-------CEEEEEEeCCCC--HHHHHHcCCCCCCEEEEEC----CCCc---------EEEEeCC
Confidence 4678999999998875 499999999975 8999999999999999983 2332 1245688
Q ss_pred CCHHHHHHHHHHhcccCCCC
Q 013733 82 QTADGLLTWINKQTSRSYGL 101 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~~~l 101 (437)
.+.+.|.+||++.++...+.
T Consensus 112 ~~~~~l~~~l~~~~~~~~~~ 131 (136)
T 2l5l_A 112 MPKASFKKAIDEFLLKKEGH 131 (136)
T ss_dssp CCHHHHHHHHHHHHTSCTTS
T ss_pred CCHHHHHHHHHHHhhccCCC
Confidence 99999999999988654443
No 58
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.23 E-value=9.2e-07 Score=73.85 Aligned_cols=70 Identities=14% Similarity=0.278 Sum_probs=56.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++|+.+.+ +.+++|||+.+ .+++++|+|+++||+.+|. +|. .+..+.|.
T Consensus 47 ~~~~p~l~~l~~~~~~--------v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 103 (116)
T 3qfa_C 47 KMIKPFFHSLSEKYSN--------VIFLEVDVDDC--QDVASECEVKSMPTFQFFK-----KGQ--------KVGEFSGA 103 (116)
T ss_dssp HHHHHHHHHHHTTCTT--------SEEEEEETTTT--HHHHHHTTCCSSSEEEEES-----SSS--------EEEEEESC
T ss_pred HHHHHHHHHHHHHCCC--------CEEEEEECCCC--HHHHHHcCCccccEEEEEe-----CCe--------EEEEEcCC
Confidence 4678999999987642 89999999875 9999999999999999984 332 13345677
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
+.+.|.++|++.+
T Consensus 104 -~~~~l~~~l~~~l 116 (116)
T 3qfa_C 104 -NKEKLEATINELV 116 (116)
T ss_dssp -CHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHhC
Confidence 9999999998753
No 59
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.22 E-value=1.3e-06 Score=96.00 Aligned_cols=77 Identities=21% Similarity=0.368 Sum_probs=63.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCC-
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED- 80 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g- 80 (437)
++++|+|+++|+.+++ .|.|++|||+.+ ..+|.+|+|++||||++|+++.... .....|.|
T Consensus 579 ~~~~p~~~~lA~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pti~~~~~~~~~~---------~~~~~y~g~ 640 (780)
T 3apo_A 579 QVLMPEWKRMARTLTG-------LINVGSVDCGQY--HSFCTQENVQRYPEIRFYPQKSSKA---------YQYHSYNGW 640 (780)
T ss_dssp HHHHHHHHHHHHHHTT-------TSEEEEEETTTT--HHHHHHTTCCSSSEEEEECCCSSSC---------CSCEECCCS
T ss_pred HHhhHHHHHHHHHhhC-------CeEEEEEECcch--HHHHHHcCCCCCCeEEEEcCCCcCc---------cchhhcCCC
Confidence 4688999999999986 499999999975 8999999999999999997542210 11345788
Q ss_pred CCCHHHHHHHHHHhcc
Q 013733 81 WQTADGLLTWINKQTS 96 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l~ 96 (437)
.|+.++|.+||.+.+.
T Consensus 641 ~~~~~~l~~fi~~~~~ 656 (780)
T 3apo_A 641 NRDAYSLRSWGLGFLP 656 (780)
T ss_dssp CCSHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHhhhcc
Confidence 8999999999998863
No 60
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.22 E-value=1.3e-06 Score=69.70 Aligned_cols=72 Identities=10% Similarity=0.194 Sum_probs=58.7
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ +.++.|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 32 ~~~~~~~~~~~~~~~~--------~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~g~--------~~~~~~g~ 88 (104)
T 2e0q_A 32 LILAPIIEELAEDYPQ--------VGFGKLNSDEN--PDIAARYGVMSLPTVIFFK-----DGE--------PVDEIIGA 88 (104)
T ss_dssp HHHHHHHHHHHHHCTT--------SEEEEEETTTC--HHHHHHTTCCSSCEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHhHHHHHHHHHcCC--------ceEEEEECCCC--HHHHHhCCccccCEEEEEE-----CCe--------EhhhccCC
Confidence 4578999999988753 89999999975 8999999999999999983 332 13346688
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+|+++.++
T Consensus 89 ~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 89 VPREEIEIRIKNLLG 103 (104)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999998764
No 61
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.21 E-value=2.4e-06 Score=88.21 Aligned_cols=83 Identities=11% Similarity=0.383 Sum_probs=67.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.++|+|+++|+.+++.. .|.+++||++.+ +++.+|+|.+|||+++|++|... .+..|.|.
T Consensus 386 ~~~~p~~~~l~~~~~~~~-----~v~~~~id~~~~---~~~~~~~v~~~Pt~~~~~~~~~~-----------~~~~~~G~ 446 (481)
T 3f8u_A 386 KNLEPKYKELGEKLSKDP-----NIVIAKMDATAN---DVPSPYEVRGFPTIYFSPANKKL-----------NPKKYEGG 446 (481)
T ss_dssp HHHHHHHHHHHHHTTTCS-----SEEEEEEETTSS---CCCTTCCCCSSSEEEEECTTCTT-----------SCEECCSC
T ss_pred HHhhHHHHHHHHHhccCC-----CEEEEEEECCch---hhHhhCCCcccCEEEEEeCCCeE-----------eeeEeCCC
Confidence 468999999999998743 599999999874 89999999999999999644210 13467899
Q ss_pred CCHHHHHHHHHHhcccCCCCCC
Q 013733 82 QTADGLLTWINKQTSRSYGLDD 103 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~~~l~~ 103 (437)
++.++|++||++++.....+..
T Consensus 447 ~~~~~l~~~l~~~~~~~~~~~~ 468 (481)
T 3f8u_A 447 RELSDFISYLQREATNPPVIQE 468 (481)
T ss_dssp CSHHHHHHHHHHHCSSCCCCCC
T ss_pred CCHHHHHHHHHHhcCCcccccc
Confidence 9999999999999876555443
No 62
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.21 E-value=1.3e-06 Score=73.02 Aligned_cols=73 Identities=22% Similarity=0.337 Sum_probs=59.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .|.++.|||+.+ .+++++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 47 ~~~~~~l~~~~~~~~~-------~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 104 (119)
T 1w4v_A 47 KILGPRLEKMVAKQHG-------KVVMAKVDIDDH--TDLAIEYEVSAVPTVLAMK-----NGD--------VVDKFVGI 104 (119)
T ss_dssp HHHHHHHHHHHHHTTT-------SSEEEEEETTTT--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhcC-------CeEEEEEeCCCC--HHHHHHcCCCcccEEEEEe-----CCc--------EEEEEcCC
Confidence 4678999999998864 499999999975 8999999999999999983 332 12346688
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+||++.++
T Consensus 105 ~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 105 KDEDQLEAFLKKLIG 119 (119)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhC
Confidence 899999999988753
No 63
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.21 E-value=7.4e-07 Score=74.20 Aligned_cols=73 Identities=21% Similarity=0.408 Sum_probs=58.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCC-
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED- 80 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g- 80 (437)
+.+.|+++++|+.+.+ .+.+++|||+.+ .++|++|+|+++||+.+|.++.. +..+.|
T Consensus 37 ~~~~~~~~~~~~~~~~-------~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~~~~-------------~~~~~g~ 94 (122)
T 3aps_A 37 QNFAPEFELLARMIKG-------KVRAGKVDCQAY--PQTCQKAGIKAYPSVKLYQYERA-------------KKSIWEE 94 (122)
T ss_dssp HHHHHHHHHHHHHHTT-------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEEEEGG-------------GTEEEEE
T ss_pred HHHHHHHHHHHHHhcC-------CeEEEEEeCcCC--HHHHHHcCCCccceEEEEeCCCc-------------cceeecc
Confidence 4688999999999875 499999999976 89999999999999999843321 122334
Q ss_pred ---CCCHHHHHHHHHHhcc
Q 013733 81 ---WQTADGLLTWINKQTS 96 (437)
Q Consensus 81 ---~Rtae~Iv~~i~k~l~ 96 (437)
.++.+.|.+|+++.+.
T Consensus 95 ~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 95 QINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EECCSCHHHHHHHHHHHHH
T ss_pred ccCcCCHHHHHHHHHHHHH
Confidence 3899999999998875
No 64
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.21 E-value=8.8e-07 Score=71.49 Aligned_cols=72 Identities=15% Similarity=0.264 Sum_probs=58.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 33 ~~~~~~l~~~~~~~~~-------~v~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 90 (105)
T 1nsw_A 33 RMMAPVLEEFAEAHAD-------KVTVAKLNVDEN--PETTSQFGIMSIPTLILFK-----GGR--------PVKQLIGY 90 (105)
T ss_dssp HHHHHHHHHHHHHSTT-------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhcC-------CcEEEEEECcCC--HHHHHHcCCccccEEEEEe-----CCe--------EEEEEecC
Confidence 4578999999998864 499999999875 8999999999999999983 332 12345688
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.+|+++.+
T Consensus 91 ~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 91 QPKEQLEAQLADVL 104 (105)
T ss_dssp CCHHHHHHHTTTTT
T ss_pred CCHHHHHHHHHHHh
Confidence 89999999987654
No 65
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.20 E-value=1.4e-06 Score=70.10 Aligned_cols=70 Identities=14% Similarity=0.267 Sum_probs=56.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++|+.+.+ +.++.|||+.+ .+++++|+|+++||+.+|.. |. .+..+.|.
T Consensus 36 ~~~~~~~~~~~~~~~~--------~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~-----g~--------~~~~~~g~ 92 (105)
T 3m9j_A 36 KMIKPFFHSLSEKYSN--------VIFLEVDVDDC--QDVASESEVKSMPTFQFFKK-----GQ--------KVGEFSGA 92 (105)
T ss_dssp HHHHHHHHHHHHHSTT--------SEEEEEETTTC--HHHHHHTTCCBSSEEEEEET-----TE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHccC--------eEEEEEEhhhh--HHHHHHcCCCcCcEEEEEEC-----Ce--------EEEEEeCC
Confidence 4678999999998753 89999999875 89999999999999999842 32 13345677
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
+.+.|.+|+++.+
T Consensus 93 -~~~~l~~~l~~~l 105 (105)
T 3m9j_A 93 -NKEKLEATINELV 105 (105)
T ss_dssp -CHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHhC
Confidence 9999999998753
No 66
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.20 E-value=1.3e-06 Score=71.52 Aligned_cols=73 Identities=14% Similarity=0.206 Sum_probs=59.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 39 ~~~~~~l~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 96 (112)
T 1t00_A 39 RQIAPSLEAIAAEYGD-------KIEIVKLNIDEN--PGTAAKYGVMSIPTLNVYQ-----GGE--------VAKTIVGA 96 (112)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HhcCHHHHHHHHHhcC-------CeEEEEEEcCCC--HHHHHhCCCCcccEEEEEe-----CCE--------EEEEEeCC
Confidence 4578999999998864 499999999975 8999999999999999874 332 12346688
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
.+.+.|.+|+++.+.
T Consensus 97 ~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 97 KPKAAIVRDLEDFIA 111 (112)
T ss_dssp CCHHHHHHHTHHHHC
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999999988763
No 67
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.20 E-value=1.5e-06 Score=74.57 Aligned_cols=73 Identities=18% Similarity=0.219 Sum_probs=60.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+++++++.+.+ .+.++.|||+.+ .+++.+|+|+++||+.+|+ +|. .+..+.|.
T Consensus 66 ~~~~~~l~~l~~~~~~-------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 123 (140)
T 1v98_A 66 RLVSPILEELARDHAG-------RLKVVKVNVDEH--PGLAARYGVRSVPTLVLFR-----RGA--------PVATWVGA 123 (140)
T ss_dssp HHHHHHHHHHHHHTTT-------TEEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHccC-------ceEEEEEECCCC--HHHHHHCCCCccCEEEEEe-----CCc--------EEEEEeCC
Confidence 4578999999998875 499999999975 8999999999999999984 332 12346788
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+||++.+.
T Consensus 124 ~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 124 SPRRVLEERLRPYLE 138 (140)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHc
Confidence 999999999998764
No 68
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.17 E-value=9.5e-07 Score=73.14 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=59.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++|+.+.+ .+.++.|||+.+ .++|++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 46 ~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~i~~~Pt~~~~~-----~g~--------~~~~~~G~ 103 (121)
T 2i1u_A 46 KMVAPVLEEIATERAT-------DLTVAKLDVDTN--PETARNFQVVSIPTLILFK-----DGQ--------PVKRIVGA 103 (121)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhcC-------CeEEEEEECCCC--HHHHHhcCCCcCCEEEEEE-----CCE--------EEEEecCC
Confidence 4678999999998864 499999999975 8999999999999999984 332 13346788
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+||++.++
T Consensus 104 ~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 104 KGKAALLRELSDVVP 118 (121)
T ss_dssp CCHHHHHHHTCSCCC
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999977654
No 69
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.17 E-value=1.7e-06 Score=69.50 Aligned_cols=72 Identities=14% Similarity=0.263 Sum_probs=58.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+++ .+.++.|||+.+ .++|++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 34 ~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~g~--------~~~~~~G~ 91 (105)
T 1fb6_A 34 KLIAPVIDELAKEYSG-------KIAVYKLNTDEA--PGIATQYNIRSIPTVLFFK-----NGE--------RKESIIGA 91 (105)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEEEC
T ss_pred HHHHHHHHHHHHHhcC-------ceEEEEEcCcch--HHHHHhCCCCcccEEEEEe-----CCe--------EEEEEecC
Confidence 4578999999998875 499999999875 8999999999999999874 332 12345688
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.++|++.+
T Consensus 92 ~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 92 VPKSTLTDSIEKYL 105 (105)
T ss_dssp CCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhhC
Confidence 89999999998753
No 70
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.17 E-value=1.8e-06 Score=69.82 Aligned_cols=72 Identities=10% Similarity=0.209 Sum_probs=58.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+++ .+.++.|||+.+ .+++++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 35 ~~~~~~l~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 92 (107)
T 1dby_A 35 RIIAPVVDEIAGEYKD-------KLKCVKLNTDES--PNVASEYGIRSIPTIMVFK-----GGK--------KCETIIGA 92 (107)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--HHHHHHHTCCSSCEEEEES-----SSS--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhCC-------ceEEEEEECCCC--HHHHHHCCCCcCCEEEEEe-----CCE--------EEEEEeCC
Confidence 4578999999998875 499999999875 8999999999999999874 332 12345688
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.+++++.+
T Consensus 93 ~~~~~l~~~l~~~l 106 (107)
T 1dby_A 93 VPKATIVQTVEKYL 106 (107)
T ss_dssp CCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHh
Confidence 89999999998765
No 71
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.15 E-value=2.1e-06 Score=69.93 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=55.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++|+.+. .+.+++||++.+ .+++++|+|+++||+.+|. +|. .+..+.|.
T Consensus 37 ~~~~~~~~~~~~~~~--------~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 93 (107)
T 1gh2_A 37 LRIAPAFSSMSNKYP--------QAVFLEVDVHQC--QGTAATNNISATPTFQFFR-----NKV--------RIDQYQGA 93 (107)
T ss_dssp HHHHHHHHHHHHHCT--------TSEEEEEETTTS--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHCC--------CcEEEEEECccC--HHHHHhcCCCcccEEEEEE-----CCe--------EEEEEeCC
Confidence 467899999999872 399999999865 8999999999999999984 332 12345564
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
+.++|.+|+++.++
T Consensus 94 -~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 94 -DAVGLEEKIKQHLE 107 (107)
T ss_dssp -CHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHhcC
Confidence 45669999988753
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.13 E-value=2.9e-06 Score=81.42 Aligned_cols=72 Identities=15% Similarity=0.369 Sum_probs=61.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++++.+++ .|.|++|||+.+ +++|.+|+|+++||+++|. +|. .+..+.|.
T Consensus 42 ~~~~p~~~~~~~~~~~-------~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~g~ 99 (287)
T 3qou_A 42 LQLTPILESLAAQYNG-------QFILAKLDCDAE--QMIAAQFGLRAIPTVYLFQ-----NGQ--------PVDGFQGP 99 (287)
T ss_dssp TTTHHHHHHHHHHHTS-------SSEEEEEETTTC--HHHHHTTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHcCC-------CeEEEEEeCccC--HHHHHHcCCCCCCeEEEEE-----CCE--------EEEEeeCC
Confidence 6799999999999975 499999999975 9999999999999999984 332 13456788
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+|+.+.+
T Consensus 100 ~~~~~l~~~l~~~l 113 (287)
T 3qou_A 100 QPEEAIRALLDXVL 113 (287)
T ss_dssp CCHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHc
Confidence 99999999998876
No 73
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.12 E-value=2.8e-06 Score=68.27 Aligned_cols=70 Identities=13% Similarity=0.308 Sum_probs=56.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+++ .+.++.|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|
T Consensus 36 ~~~~~~l~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~g- 92 (106)
T 1xwb_A 36 KMISPKLVELSTQFAD-------NVVVLKVDVDEC--EDIAMEYNISSMPTFVFLK-----NGV--------KVEEFAG- 92 (106)
T ss_dssp HHHHHHHHHHHHHTTT-------TEEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEES-
T ss_pred HHhhHHHHHHHHHhCC-------CeEEEEEeccch--HHHHHHcCCCcccEEEEEc-----CCc--------EEEEEcC-
Confidence 4578999999998863 499999999875 8999999999999999884 332 1234557
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
.+.+.|.+||++.
T Consensus 93 ~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 93 ANAKRLEDVIKAN 105 (106)
T ss_dssp CCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHh
Confidence 6889999998765
No 74
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.09 E-value=2.4e-06 Score=69.68 Aligned_cols=72 Identities=15% Similarity=0.281 Sum_probs=57.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 40 ~~~~~~l~~~~~~~~~-------~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 97 (112)
T 1ep7_A 40 KMIAPLFETLSNDYAG-------KVIFLKVDVDAV--AAVAEAAGITAMPTFHVYK-----DGV--------KADDLVGA 97 (112)
T ss_dssp HHHHHHHHHHHHHTTT-------TSEEEEEETTTT--HHHHHHHTCCBSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHcCC-------CeEEEEEECCch--HHHHHHcCCCcccEEEEEE-----CCe--------EEEEEcCC
Confidence 4578999999998864 499999999875 8999999999999999874 332 12345677
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
+.+.|.+||++.+.
T Consensus 98 -~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 98 -SQDKLKALVAKHAA 111 (112)
T ss_dssp -CHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHhc
Confidence 89999999988763
No 75
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.08 E-value=3.1e-06 Score=72.07 Aligned_cols=71 Identities=15% Similarity=0.230 Sum_probs=57.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+++++++.+. .|.+++|||+.+ .++|.+|+|.++||+.+|+ +|. .+..+.|
T Consensus 53 ~~~~p~l~~l~~~~~--------~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~i~~-----~G~--------~~~~~~G- 108 (125)
T 1r26_A 53 KTIERPMEKIAYEFP--------TVKFAKVDADNN--SEIVSKCRVLQLPTFIIAR-----SGK--------MLGHVIG- 108 (125)
T ss_dssp HHTHHHHHHHHHHCT--------TSEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEES-
T ss_pred HHHHHHHHHHHHHCC--------CCEEEEEECCCC--HHHHHHcCCCcccEEEEEe-----CCe--------EEEEEeC-
Confidence 468999999999873 399999999875 8999999999999999873 332 1234557
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
.+.+.|.+||++.+.
T Consensus 109 ~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 109 ANPGMLRQKLRDIIK 123 (125)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc
Confidence 688999999988764
No 76
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.07 E-value=4.7e-06 Score=77.71 Aligned_cols=75 Identities=13% Similarity=0.239 Sum_probs=62.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+++ .+.+++|||+.+ .++|.+|+|+++||+.+|. +|. .+..+.|.
T Consensus 46 ~~~~p~l~~l~~~~~~-------~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 103 (222)
T 3dxb_A 46 KMIAPILDEIADEYQG-------KLTVAKLNIDQN--PGTAPKYGIRGIPTLLLFK-----NGE--------VAATKVGA 103 (222)
T ss_dssp HHHHHHHHHHHHHTTT-------TCEEEEEETTTC--TTTGGGGTCCSBSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHhcC-------CcEEEEEECCCC--HHHHHHcCCCcCCEEEEEE-----CCe--------EEEEeccc
Confidence 4688999999999875 499999999976 8999999999999999984 332 13356788
Q ss_pred CCHHHHHHHHHHhcccC
Q 013733 82 QTADGLLTWINKQTSRS 98 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~ 98 (437)
++.+.|.+|+++.+...
T Consensus 104 ~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 104 LSKGQLKEFLDANLAGS 120 (222)
T ss_dssp CCHHHHHHHHHHHSCCS
T ss_pred cChHHHHHHHHhhcccc
Confidence 99999999999988643
No 77
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.07 E-value=3.7e-06 Score=69.91 Aligned_cols=71 Identities=18% Similarity=0.303 Sum_probs=57.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.|+++++.+.+ +.+++|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 50 ~~~~~~l~~~~~~~~~--------~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 106 (122)
T 2vlu_A 50 RIMAPVFADLAKKFPN--------AVFLKVDVDEL--KPIAEQFSVEAMPTFLFMK-----EGD--------VKDRVVGA 106 (122)
T ss_dssp HHHHHHHHHHHHHCTT--------SEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHCCC--------cEEEEEECCCC--HHHHHHcCCCcccEEEEEe-----CCE--------EEEEEeCc
Confidence 4578999999988753 89999999975 8999999999999999874 332 12345677
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
. .+.|.+||++.+.
T Consensus 107 ~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 107 I-KEELTAKVGLHAA 120 (122)
T ss_dssp C-HHHHHHHHHHHHS
T ss_pred C-HHHHHHHHHHHhc
Confidence 8 9999999998765
No 78
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.03 E-value=1.1e-05 Score=62.43 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=55.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.+..||++.+ .+++++|+|+++||+.+ +|. + .+.|.
T Consensus 18 ~~~~~~l~~~~~~~~~-------~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~-------~G~---------~-~~~G~ 71 (85)
T 1fo5_A 18 PAAKRVVEEVANEMPD-------AVEVEYINVMEN--PQKAMEYGIMAVPTIVI-------NGD---------V-EFIGA 71 (85)
T ss_dssp CTHHHHHHHHHHHCSS-------SEEEEEEESSSS--CCTTTSTTTCCSSEEEE-------TTE---------E-ECCSS
T ss_pred HHHHHHHHHHHHHcCC-------ceEEEEEECCCC--HHHHHHCCCcccCEEEE-------CCE---------E-eeecC
Confidence 5789999999998864 499999999865 89999999999999987 221 1 35677
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.+|+++.+
T Consensus 72 ~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 72 PTKEALVEAIKKRL 85 (85)
T ss_dssp SSSHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhC
Confidence 78899999998753
No 79
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.03 E-value=3.3e-06 Score=77.92 Aligned_cols=76 Identities=16% Similarity=0.067 Sum_probs=60.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.|+++|+.+.+.+ .+.|.+++|||+.+ .++|++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 150 ~~~~p~~~~l~~~~~~~~---~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 211 (226)
T 1a8l_A 150 PLAVRMAHKFAIENTKAG---KGKILGDMVEAIEY--PEWADQYNVMAVPKIVIQV-----NGE--------DRVEFEGA 211 (226)
T ss_dssp HHHHHHHHHHHHHHHHTT---CCCEEEEEEEGGGC--HHHHHHTTCCSSCEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHhccccc---CCcEEEEEEEcccC--HHHHHhCCCcccCeEEEEe-----CCc--------eeEEEcCC
Confidence 467899999999986210 01599999999975 8999999999999999984 332 13456799
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.|.+||++.+
T Consensus 212 ~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 212 YPEKMFLEKLLSAL 225 (226)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh
Confidence 99999999998765
No 80
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.02 E-value=5.3e-06 Score=68.28 Aligned_cols=69 Identities=17% Similarity=0.202 Sum_probs=55.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ +.++.|||+.+ .+++++|+|+++||+.+|. +|. .+..+.|.
T Consensus 40 ~~~~p~l~~l~~~~~~--------~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 96 (109)
T 3f3q_A 40 KMIAPMIEKFSEQYPQ--------ADFYKLDVDEL--GDVAQKNEVSAMPTLLLFK-----NGK--------EVAKVVGA 96 (109)
T ss_dssp HHHHHHHHHHHHHCTT--------SEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHCCC--------CEEEEEECCCC--HHHHHHcCCCccCEEEEEE-----CCE--------EEEEEeCC
Confidence 4688999999998753 88999999875 8999999999999999983 332 13345566
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
+.+.|.++|++.
T Consensus 97 -~~~~l~~~i~~~ 108 (109)
T 3f3q_A 97 -NPAAIKQAIAAN 108 (109)
T ss_dssp -CHHHHHHHHHHH
T ss_pred -CHHHHHHHHHhh
Confidence 678999998875
No 81
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.99 E-value=8.3e-06 Score=68.35 Aligned_cols=77 Identities=10% Similarity=0.110 Sum_probs=61.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEe--cccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVD--CALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE 79 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVD--Ca~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~ 79 (437)
+.+.|.++++++.+++ .+.+..|| ++.+ .+++++|+|.++||+.+|.+ +|. .+..+.
T Consensus 42 ~~~~~~l~~~~~~~~~-------~v~~~~v~~~~d~~--~~~~~~~~v~~~Pt~~~~~~----~G~--------~~~~~~ 100 (126)
T 2l57_A 42 VEMQKELSYVSKEREG-------KFNIYYARLEEEKN--IDLAYKYDANIVPTTVFLDK----EGN--------KFYVHQ 100 (126)
T ss_dssp HHHHHHHHHHHHHSSS-------SCEEEEEETTSSHH--HHHHHHTTCCSSSEEEEECT----TCC--------EEEEEE
T ss_pred HHHHHHHHHHHHHhcC-------CeEEEEEeCCCCch--HHHHHHcCCcceeEEEEECC----CCC--------EEEEec
Confidence 4678999999999873 49999999 7765 89999999999999999842 332 123456
Q ss_pred CCCCHHHHHHHHHHhcccCC
Q 013733 80 DWQTADGLLTWINKQTSRSY 99 (437)
Q Consensus 80 g~Rtae~Iv~~i~k~l~~~~ 99 (437)
|..+.+.|.+||++.+....
T Consensus 101 G~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 101 GLMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp SCCCHHHHHHHHHHHCCCCC
T ss_pred CCCCHHHHHHHHHHHhcccc
Confidence 88999999999999876443
No 82
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.99 E-value=8.8e-06 Score=71.22 Aligned_cols=75 Identities=12% Similarity=0.223 Sum_probs=58.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.|+++++.+. .|.+++|||+.+ .++|++|+|+++||+.+|. +|. .+..+.|
T Consensus 48 ~~~~p~l~~l~~~~~--------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G- 103 (153)
T 2wz9_A 48 AQMNEVMAELAKELP--------QVSFVKLEAEGV--PEVSEKYEISSVPTFLFFK-----NSQ--------KIDRLDG- 103 (153)
T ss_dssp HHHHHHHHHHHHHCT--------TSEEEEEETTTS--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEES-
T ss_pred HHHHHHHHHHHHHcC--------CeEEEEEECCCC--HHHHHHcCCCCCCEEEEEE-----CCE--------EEEEEeC-
Confidence 468899999999863 399999999975 8999999999999999983 332 1223445
Q ss_pred CCHHHHHHHHHHhcccCCC
Q 013733 82 QTADGLLTWINKQTSRSYG 100 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~~~~ 100 (437)
.+.+.|.+||++.++....
T Consensus 104 ~~~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 104 AHAPELTKKVQRHASSGSF 122 (153)
T ss_dssp SCHHHHHHHHHHHSCTTSS
T ss_pred CCHHHHHHHHHHHhccccC
Confidence 5788999999999875443
No 83
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.99 E-value=4.7e-06 Score=68.20 Aligned_cols=73 Identities=10% Similarity=0.244 Sum_probs=56.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.++.. .+.+++|||+.+ .+++.+|+|+++||+.+|. +|. .+..+.|.
T Consensus 37 ~~~~~~~~~~~~~~~~~------~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 95 (112)
T 3d6i_A 37 KALKQVFEAISNEPSNS------NVSFLSIDADEN--SEISELFEISAVPYFIIIH-----KGT--------ILKELSGA 95 (112)
T ss_dssp HHHHHHHHHHHHCGGGT------TSEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEECSC
T ss_pred HHHHHHHHHHHHhcCCC------CEEEEEEecccC--HHHHHHcCCCcccEEEEEE-----CCE--------EEEEecCC
Confidence 46789999999987442 499999999875 8999999999999999973 332 12345566
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
+.+.|.++|++.+.
T Consensus 96 -~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 96 -DPKEYVSLLEDCKN 109 (112)
T ss_dssp -CHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHh
Confidence 45569999987764
No 84
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.98 E-value=1.3e-05 Score=61.98 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=56.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.+..||++.+ .+++++|+|+++||+.+ +|. + .+.|.
T Consensus 17 ~~~~~~l~~~~~~~~~-------~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~-------~G~---------~-~~~G~ 70 (85)
T 1nho_A 17 PMAIEVVDEAKKEFGD-------KIDVEKIDIMVD--REKAIEYGLMAVPAIAI-------NGV---------V-RFVGA 70 (85)
T ss_dssp TTHHHHHHHHHHHHCS-------SCCEEEECTTTC--GGGGGGTCSSCSSEEEE-------TTT---------E-EEECS
T ss_pred HHHHHHHHHHHHHhcC-------CeEEEEEECCCC--HHHHHhCCceeeCEEEE-------CCE---------E-EEccC
Confidence 5789999999998874 489999999865 89999999999999987 232 1 34577
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.+|+++.+
T Consensus 71 ~~~~~l~~~l~~~l 84 (85)
T 1nho_A 71 PSREELFEAINDEM 84 (85)
T ss_dssp SCCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHh
Confidence 78899999998765
No 85
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.95 E-value=7.3e-06 Score=67.39 Aligned_cols=70 Identities=19% Similarity=0.309 Sum_probs=55.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.++.|||..+ .+++++|+|.++||+.+|. +|. .+..+.|.
T Consensus 42 ~~~~~~l~~l~~~~~--------~v~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 98 (112)
T 1syr_A 42 KRIAPFYEECSKTYT--------KMVFIKVDVDEV--SEVTEKENITSMPTFKVYK-----NGS--------SVDTLLGA 98 (112)
T ss_dssp HHHHHHHHHHHHHCT--------TSEEEEEETTTT--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHcC--------CCEEEEEECCCC--HHHHHHcCCCcccEEEEEE-----CCc--------EEEEEeCC
Confidence 467899999999864 289999999875 8999999999999999873 332 12345677
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
+.+.|.+||++.+
T Consensus 99 -~~~~l~~~l~~~l 111 (112)
T 1syr_A 99 -NDSALKQLIEKYA 111 (112)
T ss_dssp -CHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHhh
Confidence 8999999998754
No 86
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.93 E-value=1.2e-06 Score=75.00 Aligned_cols=50 Identities=18% Similarity=0.374 Sum_probs=43.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCccc------ccceeeEcCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG------HYPMLLWGSPS 59 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~------gYPTLklf~p~ 59 (437)
+.+.|+|+++|+.+++. .+.+++|||+.+ .++|.+|+|+ ++||+.+|..|
T Consensus 42 ~~~~p~~~~l~~~~~~~------~v~~~~vd~~~~--~~~~~~~~v~~~~~~~~~Pt~~~~~~G 97 (137)
T 2dj0_A 42 QSFAPIYADLSLKYNCT------GLNFGKVDVGRY--TDVSTRYKVSTSPLTKQLPTLILFQGG 97 (137)
T ss_dssp TTTHHHHHHHHHHHCSS------SCEEEECCTTTC--HHHHHHTTCCCCSSSSCSSEEEEESSS
T ss_pred HHHHHHHHHHHHHhCCC------CeEEEEEeCccC--HHHHHHccCcccCCcCCCCEEEEEECC
Confidence 67899999999999753 499999999875 8999999999 99999998533
No 87
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.93 E-value=9.7e-06 Score=64.85 Aligned_cols=70 Identities=21% Similarity=0.355 Sum_probs=55.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.++.|||+.+ .+++++|+|+++||+.+|. +|. .+..+.|
T Consensus 35 ~~~~~~l~~~~~~~~--------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~g~--------~~~~~~G- 90 (104)
T 2vim_A 35 RNIAPKVEALAKEIP--------EVEFAKVDVDQN--EEAAAKYSVTAMPTFVFIK-----DGK--------EVDRFSG- 90 (104)
T ss_dssp HHHHHHHHHHHHHCT--------TSEEEEEETTTC--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEES-
T ss_pred HHhhHHHHHHHHHCC--------CCEEEEEeccCC--HHHHHHcCCccccEEEEEe-----CCc--------EEEEEeC-
Confidence 357899999999874 289999999875 8999999999999999873 332 1234457
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.+|+++.+
T Consensus 91 ~~~~~l~~~l~~~l 104 (104)
T 2vim_A 91 ANETKLRETITRHK 104 (104)
T ss_dssp SCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhhC
Confidence 68899999998753
No 88
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.93 E-value=5e-06 Score=68.51 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=56.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.+++||++.+ .+++++|+|+++||+.+|. +|. .+..+.|.
T Consensus 35 ~~~~~~l~~~~~~~~--------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~v~~~~G~ 91 (110)
T 2l6c_A 35 KNMEKVLDKFGARAP--------QVAISSVDSEAR--PELMKELGFERVPTLVFIR-----DGK--------VAKVFSGI 91 (110)
T ss_dssp HHHHHHHHHHHTTCT--------TSCEEEEEGGGC--HHHHHHTTCCSSCEEEEEE-----SSS--------EEEEEESC
T ss_pred HHHHHHHHHHHHHCC--------CcEEEEEcCcCC--HHHHHHcCCcccCEEEEEE-----CCE--------EEEEEcCC
Confidence 457899999988653 389999999865 8999999999999999983 332 13345688
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
.+.+.|.+++.+..++
T Consensus 92 ~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 92 MNPRELQALYASIHHH 107 (110)
T ss_dssp CCHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHhhh
Confidence 8999999999877653
No 89
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.91 E-value=7.9e-06 Score=67.58 Aligned_cols=69 Identities=12% Similarity=0.294 Sum_probs=54.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+ + +.+++|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|
T Consensus 49 ~~~~~~~~~~~~~~---~------~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G- 103 (117)
T 2xc2_A 49 KTIAPLFKELSEKY---D------AIFVKVDVDKL--EETARKYNISAMPTFIAIK-----NGE--------KVGDVVG- 103 (117)
T ss_dssp HHHHHHHHHHHTTS---S------SEEEEEETTTS--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEES-
T ss_pred HHHhHHHHHHHHHc---C------cEEEEEECCcc--HHHHHHcCCCccceEEEEe-----CCc--------EEEEEeC-
Confidence 46789999999866 2 88999999875 8999999999999999873 332 1234556
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.++|++.+
T Consensus 104 ~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 104 ASIAKVEDMIKKFI 117 (117)
T ss_dssp SCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhC
Confidence 68889999998753
No 90
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.90 E-value=9.2e-06 Score=71.37 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=58.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCccc---CCCCCCCccccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFV---AGSWEPNQEKKEIRAL 78 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~---~G~~~~~~~~~~i~~y 78 (437)
+.+.|.++++|+.+++ .+.+++||++.+ .+++.+|+|.++||+.+|..|... .|... -..+
T Consensus 39 ~~~~p~l~~l~~~~~~-------~~~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~-------~~~~ 102 (149)
T 3gix_A 39 LQLDDILSKTSSDLSK-------MAAIYLVDVDQT--AVYTQYFDISYIPSTVFFFNGQHMKVDYGSPD-------HTKF 102 (149)
T ss_dssp HHHHHHHHHHHTTTTT-------TEEEEEEETTTC--CHHHHHTTCCSSSEEEEEETTEEEEEECSSSC-------CSCE
T ss_pred HHHHHHHHHHHHHccC-------ceEEEEEECCcC--HHHHHHcCCCccCeEEEEECCeEEEeecCCCC-------CCeE
Confidence 4688999999988764 499999999865 999999999999999988654322 01100 0234
Q ss_pred CC-CCCHHHHHHHHHHhc
Q 013733 79 ED-WQTADGLLTWINKQT 95 (437)
Q Consensus 79 ~g-~Rtae~Iv~~i~k~l 95 (437)
.| ..+.+.|.+++++.+
T Consensus 103 ~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 103 VGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp ESCCSSHHHHHHHHHHHH
T ss_pred eeecCCHHHHHHHHHHHH
Confidence 57 788999999998765
No 91
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.90 E-value=1.1e-05 Score=66.05 Aligned_cols=71 Identities=21% Similarity=0.376 Sum_probs=54.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ +.+++|||+.+ +.+++++|+|+++||+.+|+ +|.. +..+.|.
T Consensus 40 ~~~~~~l~~~~~~~~~--------v~~~~vd~~~~-~~~~~~~~~v~~~Pt~~~~~-----~G~~--------~~~~~G~ 97 (111)
T 2pu9_C 40 KAMAPKYEKLAEEYLD--------VIFLKLDCNQE-NKTLAKELGIRVVPTFKILK-----ENSV--------VGEVTGA 97 (111)
T ss_dssp HHHHHHHHHHHHHCTT--------SEEEEEECSST-THHHHHHHCCSBSSEEEEES-----SSSE--------EEEEESS
T ss_pred HHHCHHHHHHHHHCCC--------eEEEEEecCcc-hHHHHHHcCCCeeeEEEEEe-----CCcE--------EEEEcCC
Confidence 4678999999998753 88999999842 48999999999999988874 3321 2234566
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
. .+.|.++|++.+
T Consensus 98 ~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 98 K-YDKLLEAIQAAR 110 (111)
T ss_dssp C-HHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHhh
Confidence 4 889999998754
No 92
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.89 E-value=1.9e-05 Score=67.71 Aligned_cols=75 Identities=9% Similarity=0.164 Sum_probs=58.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccc--cceeeEcCCCcccCCCCCCCcccccccc-c
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGH--YPMLLWGSPSKFVAGSWEPNQEKKEIRA-L 78 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~g--YPTLklf~p~~~~~G~~~~~~~~~~i~~-y 78 (437)
+.++|.++++|+.+++ ++.|++||.+. |.+++.+|||++ .||+.+|..+ +|.. ... .
T Consensus 38 ~~~~p~l~~~A~~~~g-------k~~f~~vd~d~--~~~~a~~~gi~~~~iPtl~i~~~~---~g~~--------~~~~~ 97 (133)
T 2djk_A 38 KELSDKLKPIAEAQRG-------VINFGTIDAKA--FGAHAGNLNLKTDKFPAFAIQEVA---KNQK--------FPFDQ 97 (133)
T ss_dssp HHHHHHHHHHHHSSTT-------TSEEEEECTTT--TGGGTTTTTCCSSSSSEEEEECTT---TCCB--------CCCCS
T ss_pred HHHHHHHHHHHHHhCC-------eEEEEEEchHH--hHHHHHHcCCCcccCCEEEEEecC---cCcc--------cCCCC
Confidence 3579999999998876 59999999775 489999999999 9999998420 1221 111 2
Q ss_pred CCCCCHHHHHHHHHHhcc
Q 013733 79 EDWQTADGLLTWINKQTS 96 (437)
Q Consensus 79 ~g~Rtae~Iv~~i~k~l~ 96 (437)
.|..+.+.|.+|+++.+.
T Consensus 98 ~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 98 EKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp SSCCCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHc
Confidence 378899999999988763
No 93
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.89 E-value=1.2e-05 Score=66.98 Aligned_cols=68 Identities=15% Similarity=0.286 Sum_probs=54.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ |.+++|||+.+ .+++++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 46 ~~~~p~l~~~~~~~~~--------v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 102 (114)
T 2oe3_A 46 KMMQPHLTKLIQAYPD--------VRFVKCDVDES--PDIAKECEVTAMPTFVLGK-----DGQ--------LIGKIIGA 102 (114)
T ss_dssp HHTHHHHHHHHHHCTT--------SEEEEEETTTC--HHHHHHTTCCSBSEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHCCC--------CEEEEEECCCC--HHHHHHCCCCcccEEEEEe-----CCe--------EEEEEeCC
Confidence 4688999999998753 89999999875 8999999999999999873 332 12345677
Q ss_pred CCHHHHHHHHHH
Q 013733 82 QTADGLLTWINK 93 (437)
Q Consensus 82 Rtae~Iv~~i~k 93 (437)
. .+.|.++|++
T Consensus 103 ~-~~~l~~~l~~ 113 (114)
T 2oe3_A 103 N-PTALEKGIKD 113 (114)
T ss_dssp C-HHHHHHHHHT
T ss_pred C-HHHHHHHHHh
Confidence 7 8899998864
No 94
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.85 E-value=1.6e-05 Score=67.13 Aligned_cols=70 Identities=17% Similarity=0.309 Sum_probs=55.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.++.||++.+ .+++++|+|+++||+.+|+ +|. .+..+.|
T Consensus 54 ~~~~~~l~~l~~~~~--------~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G- 109 (124)
T 1xfl_A 54 RFIAPFFADLAKKLP--------NVLFLKVDTDEL--KSVASDWAIQAMPTFMFLK-----EGK--------ILDKVVG- 109 (124)
T ss_dssp HHHHHHHHHHHHHCS--------SEEEEEEETTTS--HHHHHHTTCCSSSEEEEEE-----TTE--------EEEEEES-
T ss_pred HHHHHHHHHHHHHCC--------CcEEEEEECccC--HHHHHHcCCCccCEEEEEE-----CCE--------EEEEEeC-
Confidence 457899999999875 299999999865 8999999999999999874 332 1223456
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.++|++.+
T Consensus 110 ~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 110 AKKDELQSTIAKHL 123 (124)
T ss_dssp CCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhc
Confidence 48899999998764
No 95
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.85 E-value=1.8e-05 Score=82.43 Aligned_cols=78 Identities=15% Similarity=0.310 Sum_probs=60.1
Q ss_pred CcchhHHHHHHHHhC-CCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCC
Q 013733 2 RNYKPQYEKVARLFN-GPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED 80 (437)
Q Consensus 2 k~faP~fekaA~~l~-~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g 80 (437)
+.++|+|+++|+.+. +. ..|.+++|||+.+ . +.. |+|++|||+++|+.|.. ..+..|.|
T Consensus 392 ~~~~p~~~~l~~~~~~~~-----~~v~~~~vd~~~~--~-~~~-~~v~~~Pt~~~~~~G~~-----------~~~~~~~G 451 (504)
T 2b5e_A 392 KRLAPTYQELADTYANAT-----SDVLIAKLDHTEN--D-VRG-VVIEGYPTIVLYPGGKK-----------SESVVYQG 451 (504)
T ss_dssp HHHHHHHHHHHHHHHHHC-----SSCEEEEEEGGGC--C-CSS-CCCSSSSEEEEECCTTS-----------CCCCBCCS
T ss_pred HHHhHHHHHHHHHhhccC-----CcEEEEEecCCcc--c-ccc-CCceecCeEEEEeCCce-----------ecceEecC
Confidence 568999999999987 32 2599999999975 3 444 99999999999854321 01345789
Q ss_pred CCCHHHHHHHHHHhcccCC
Q 013733 81 WQTADGLLTWINKQTSRSY 99 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l~~~~ 99 (437)
.++.+.|++||++.+....
T Consensus 452 ~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 452 SRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp CCCHHHHHHHHHHHCTTCC
T ss_pred CCCHHHHHHHHHhcCCCCC
Confidence 9999999999999875443
No 96
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.84 E-value=2.4e-05 Score=68.12 Aligned_cols=79 Identities=8% Similarity=0.033 Sum_probs=57.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccC---CCCCCCccccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVA---GSWEPNQEKKEIRAL 78 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~---G~~~~~~~~~~i~~y 78 (437)
+.+.|.++++|+.+.+ .+.+++||++.+ .+++++|+|+++||+.+|..|.... |... ...+
T Consensus 39 ~~~~p~l~~l~~~~~~-------~v~~~~vd~d~~--~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~-------~~~~ 102 (142)
T 1qgv_A 39 MKMDEVLYSIAEKVKN-------FAVIYLVDITEV--PDFNKMYELYDPCTVMFFFRNKHIMIDLGTGN-------NNKI 102 (142)
T ss_dssp HHHHHHHHHHHHHHTT-------TEEEEEEETTTC--CTTTTSSCSCSSCEEEEEETTEEEEEECC-------------C
T ss_pred HHHHHHHHHHHHHhCC-------CeEEEEEccccC--HHHHHHcCCCCCCEEEEEECCcEEEEecCCCC-------ccee
Confidence 4689999999999864 499999999975 8999999999999999985442211 1000 0123
Q ss_pred CCCC-CHHHHHHHHHHhcc
Q 013733 79 EDWQ-TADGLLTWINKQTS 96 (437)
Q Consensus 79 ~g~R-tae~Iv~~i~k~l~ 96 (437)
.|.. +.+.|.++|++.+.
T Consensus 103 ~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 103 NWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp CSCCSCHHHHHHHHHHHHH
T ss_pred eeecCcHHHHHHHHHHHHH
Confidence 4544 48899999987664
No 97
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.05 E-value=2.3e-06 Score=68.36 Aligned_cols=71 Identities=23% Similarity=0.357 Sum_probs=56.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ .+.++.|||+.+ .+++++|+|.++||+.+|+ +|.. +..+.|.
T Consensus 35 ~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~g~~--------~~~~~g~ 92 (106)
T 2yj7_A 35 RMIAPIIEELAKEYEG-------KVKVVKVNVDEN--PNTAAQYGIRSIPTLLLFK-----NGQV--------VDRLVGA 92 (106)
Confidence 5688999999988764 489999999875 8999999999999999984 2321 2345688
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
.+.+.|.+|+++.
T Consensus 93 ~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 93 QPKEALKERIDKH 105 (106)
Confidence 8888999888764
No 98
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.83 E-value=6.2e-06 Score=69.14 Aligned_cols=72 Identities=15% Similarity=0.285 Sum_probs=56.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+. .+.++.|||+.+ .+++++|+|.++||+.+|+ +|. .+..+.|.
T Consensus 49 ~~~~~~l~~l~~~~~~~------~v~~~~vd~d~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 107 (121)
T 2j23_A 49 KMIGPVFEKISDTPAGD------KVGFYKVDVDEQ--SQIAQEVGIRAMPTFVFFK-----NGQ--------KIDTVVGA 107 (121)
T ss_dssp HHHHHHHHHHHTSTHHH------HSEEEEEETTTC--HHHHHHHTCCSSSEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHHHHHHHHHHHCcCC------cEEEEEEECcCC--HHHHHHcCCCcccEEEEEE-----CCe--------EEeeEcCC
Confidence 45789999999877642 299999999975 8999999999999999984 332 12345677
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
+.+.|.+||++.+
T Consensus 108 -~~~~l~~~l~~~l 120 (121)
T 2j23_A 108 -DPSKLQAAITQHS 120 (121)
T ss_dssp -CHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHhh
Confidence 8999999998764
No 99
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.83 E-value=1.7e-05 Score=64.97 Aligned_cols=72 Identities=18% Similarity=0.307 Sum_probs=56.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.++.||++.+ .+++++|+|+++||+.+|+ +|. .+..+.|
T Consensus 44 ~~~~~~l~~~~~~~~--------~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~g~--------~~~~~~g- 99 (118)
T 2vm1_A 44 RVIAPVFAEYAKKFP--------GAIFLKVDVDEL--KDVAEAYNVEAMPTFLFIK-----DGE--------KVDSVVG- 99 (118)
T ss_dssp HHHHHHHHHHHHHCT--------TSEEEEEETTTS--HHHHHHTTCCSBSEEEEEE-----TTE--------EEEEEES-
T ss_pred HHHhHHHHHHHHHCC--------CcEEEEEEcccC--HHHHHHcCCCcCcEEEEEe-----CCe--------EEEEecC-
Confidence 457899999999875 288999999865 8999999999999999974 332 1223456
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
.+.+.|.++|.+.+..
T Consensus 100 ~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 100 GRKDDIHTKIVALMGS 115 (118)
T ss_dssp CCHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHhcc
Confidence 5789999999988753
No 100
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.81 E-value=2.2e-05 Score=70.79 Aligned_cols=78 Identities=9% Similarity=0.041 Sum_probs=58.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCccc---CCCCCCCccccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFV---AGSWEPNQEKKEIRAL 78 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~---~G~~~~~~~~~~i~~y 78 (437)
|.++|.++++|+.+.+ .+.|++||.+.+ ++++.+|+|++.||+.+|..|... .|.. ++ ..+
T Consensus 57 k~m~PvleelA~e~~~-------~v~f~kVDVDe~--~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtg----d~---~k~ 120 (160)
T 2av4_A 57 MKMDELLYKVADDIKN-------FCVIYLVDITEV--PDFNTMYELYDPVSVMFFYRNKHMMIDLGTG----NN---NKI 120 (160)
T ss_dssp HHHHHHHHHHHHHHTT-------TEEEEEEETTTC--CTTTTTTTCCSSEEEEEEETTEEEEEECSSS----CC---SCB
T ss_pred HHHHHHHHHHHHHccC-------CcEEEEEECCCC--HHHHHHcCCCCCCEEEEEECCEEEEEecCCC----Cc---CeE
Confidence 5689999999999875 589999998865 999999999999999988444221 0110 00 134
Q ss_pred CCCCC-HHHHHHHHHHhc
Q 013733 79 EDWQT-ADGLLTWINKQT 95 (437)
Q Consensus 79 ~g~Rt-ae~Iv~~i~k~l 95 (437)
.|..+ .+.|.++|++.+
T Consensus 121 vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 121 NWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp CSCCCCHHHHHHHHHHHH
T ss_pred EeecCCHHHHHHHHHHHH
Confidence 57665 889999998765
No 101
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.79 E-value=1.7e-05 Score=66.07 Aligned_cols=71 Identities=21% Similarity=0.380 Sum_probs=54.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+.+ +.+++|||..+ +.+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 53 ~~~~~~l~~~~~~~~~--------~~~~~vd~~~~-~~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 110 (124)
T 1faa_A 53 KAMAPKYEKLAEEYLD--------VIFLKLDCNQE-NKTLAKELGIRVVPTFKILK-----ENS--------VVGEVTGA 110 (124)
T ss_dssp HHHHHHHHHHHHHCTT--------SEEEEEECSST-THHHHHHHCCSSSSEEEEEE-----TTE--------EEEEEESS
T ss_pred HHHhHHHHHHHHHCCC--------CEEEEEecCcc-hHHHHHHcCCCeeeEEEEEe-----CCc--------EEEEEcCC
Confidence 4678999999998753 88999999842 48999999999999998874 332 12334566
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
. .+.|.+++++.+
T Consensus 111 ~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 111 K-YDKLLEAIQAAR 123 (124)
T ss_dssp C-HHHHHHHHHHHT
T ss_pred C-HHHHHHHHHHhh
Confidence 5 889999997653
No 102
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.78 E-value=1.7e-05 Score=67.58 Aligned_cols=71 Identities=13% Similarity=0.247 Sum_probs=56.7
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.++.|||+.+ .+++++|+|+++||+.+|+ +|. .+..+.|.
T Consensus 62 ~~~~~~l~~l~~~~~--------~v~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~G~ 118 (139)
T 3d22_A 62 RQIAPYYIELSENYP--------SLMFLVIDVDEL--SDFSASWEIKATPTFFFLR-----DGQ--------QVDKLVGA 118 (139)
T ss_dssp HHHHHHHHHHHHHCT--------TSEEEEEETTTS--HHHHHHTTCCEESEEEEEE-----TTE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHCC--------CCEEEEEeCccc--HHHHHHcCCCcccEEEEEc-----CCe--------EEEEEeCC
Confidence 457899999999873 389999999875 8999999999999999873 332 12334566
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
+.+.|.++|++.+.
T Consensus 119 -~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 119 -NKPELHKKITAILD 132 (139)
T ss_dssp -CHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHhc
Confidence 78999999988875
No 103
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.76 E-value=3.2e-05 Score=73.52 Aligned_cols=77 Identities=14% Similarity=0.170 Sum_probs=61.5
Q ss_pred CcchhHHHHHHHHhC--CCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC
Q 013733 2 RNYKPQYEKVARLFN--GPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE 79 (437)
Q Consensus 2 k~faP~fekaA~~l~--~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~ 79 (437)
+.++|.|+++|..+. +.. .|.+++|||+.+ .+++.+|+|++|||+++ +|. + .|.
T Consensus 154 ~~~~p~l~~la~~~~~~~~~-----~v~~~~vd~~~~--~~~~~~~~V~~vPt~~i-------~G~---------~-~~~ 209 (243)
T 2hls_A 154 PYAVLLAHMFAYEAWKQGNP-----VILSEAVEAYEN--PDIADKYGVMSVPSIAI-------NGY---------L-VFV 209 (243)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-----CEEEEEEETTTC--HHHHHHTTCCSSSEEEE-------TTE---------E-EEE
T ss_pred HHHHHHHHHHHHHcccccCC-----cEEEEEEECccC--HHHHHHcCCeeeCeEEE-------CCE---------E-EEe
Confidence 457899999999883 211 499999999976 89999999999999987 232 1 377
Q ss_pred CCCCHHHHHHHHHHhcccCCCCC
Q 013733 80 DWQTADGLLTWINKQTSRSYGLD 102 (437)
Q Consensus 80 g~Rtae~Iv~~i~k~l~~~~~l~ 102 (437)
|.++.++|++||.+.++......
T Consensus 210 G~~~~~~l~~~l~~~~~~~~~~~ 232 (243)
T 2hls_A 210 GVPYEEDFLDYVKSAAEGRLTVK 232 (243)
T ss_dssp SCCCHHHHHHHHHHHHTTCCCCC
T ss_pred CCCCHHHHHHHHHHHhhcccccC
Confidence 99999999999999987644443
No 104
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.75 E-value=1.6e-05 Score=73.18 Aligned_cols=74 Identities=9% Similarity=0.093 Sum_probs=56.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.++|.|+++|+. .+ .|.+++|||+..++.++|++|+|+++||+.+|.. |.. ....|.|.
T Consensus 39 ~~~~~~~~~la~~-~~-------~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~-----g~~-------~~~~~~G~ 98 (226)
T 1a8l_A 39 DQLKQLVQELSEL-TD-------KLSYEIVDFDTPEGKELAKRYRIDRAPATTITQD-----GKD-------FGVRYFGL 98 (226)
T ss_dssp HHHHHHHHHHHTT-CT-------TEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEET-----TBC-------CSEEEESC
T ss_pred HHHHHHHHHHHhh-CC-------ceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcC-----Cce-------eeEEEecc
Confidence 4688999999864 22 5999999999722489999999999999999842 221 01346788
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
++.+.+.+|+...+
T Consensus 99 ~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 99 PAGHEFAAFLEDIV 112 (226)
T ss_dssp CCTTHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 88889999988765
No 105
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.74 E-value=1.4e-05 Score=67.09 Aligned_cols=77 Identities=22% Similarity=0.267 Sum_probs=59.0
Q ss_pred CcchhHH---HHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCccccccccc
Q 013733 2 RNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL 78 (437)
Q Consensus 2 k~faP~f---ekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y 78 (437)
+.+.|.+ +++++.++. .+.++.|||+...+..+|++|+|.++||+.+|. .+|. .+..+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~-------~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d----~~G~--------~~~~~ 103 (130)
T 2kuc_A 43 KRLSKVVFKDSLVADYFNR-------HFVNLKMDMEKGEGVELRKKYGVHAYPTLLFIN----SSGE--------VVYRL 103 (130)
T ss_dssp HHHHHHGGGCHHHHHHHHH-------HSEEEEECSSSTTHHHHHHHTTCCSSCEEEEEC----TTSC--------EEEEE
T ss_pred HHHHHHhcCcHHHHHHHhc-------CeEEEEEecCCcchHHHHHHcCCCCCCEEEEEC----CCCc--------EEEEe
Confidence 3567888 777777653 588899999864458999999999999999983 2332 12345
Q ss_pred CCCCCHHHHHHHHHHhccc
Q 013733 79 EDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 79 ~g~Rtae~Iv~~i~k~l~~ 97 (437)
.|..+.+.|.+||++.+.+
T Consensus 104 ~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 104 VGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp ESCCCHHHHHHHHHHHHSC
T ss_pred cCCCCHHHHHHHHHHHHHh
Confidence 6888999999999988753
No 106
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.73 E-value=3e-05 Score=64.78 Aligned_cols=72 Identities=21% Similarity=0.295 Sum_probs=56.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.++.|||+.+ .+++++|+|+++||+.+|+ +|.. +..+.|
T Consensus 52 ~~~~~~l~~~~~~~~--------~v~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~g~~--------~~~~~g- 107 (130)
T 1wmj_A 52 RFIAPVFAEYAKKFP--------GAVFLKVDVDEL--KEVAEKYNVEAMPTFLFIK-----DGAE--------ADKVVG- 107 (130)
T ss_dssp SSSHHHHHHHHHHCT--------TBCCEECCTTTS--GGGHHHHTCCSSCCCCBCT-----TTTC--------CBCCCT-
T ss_pred HHHHHHHHHHHHHCC--------CCEEEEEeccch--HHHHHHcCCCccceEEEEe-----CCeE--------EEEEeC-
Confidence 578999999999875 288999999865 8999999999999999874 3321 223456
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
.+.+.|.++|++.+..
T Consensus 108 ~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 108 ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp TCTTTHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHhc
Confidence 5778999999988753
No 107
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.67 E-value=2.3e-05 Score=63.69 Aligned_cols=70 Identities=19% Similarity=0.360 Sum_probs=54.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+. .+.+..||++.+ .+++++|+|.++||+.+|. +|. .+..+.|
T Consensus 42 ~~~~~~l~~~~~~~~--------~v~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~-----~G~--------~~~~~~g- 97 (113)
T 1ti3_A 42 KMIAPIFAELAKKFP--------NVTFLKVDVDEL--KAVAEEWNVEAMPTFIFLK-----DGK--------LVDKTVG- 97 (113)
T ss_dssp HHHHHHHHHHHHHCS--------SEEEEEEETTTC--HHHHHHHHCSSTTEEEEEE-----TTE--------EEEEEEC-
T ss_pred HHHHHHHHHHHHhCC--------CcEEEEEEcccc--HHHHHhCCCCcccEEEEEe-----CCE--------EEEEEec-
Confidence 357899999999875 299999999875 8999999999999999973 332 1223446
Q ss_pred CCHHHHHHHHHHhc
Q 013733 82 QTADGLLTWINKQT 95 (437)
Q Consensus 82 Rtae~Iv~~i~k~l 95 (437)
.+.+.|.++|++.+
T Consensus 98 ~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 98 ADKDGLPTLVAKHA 111 (113)
T ss_dssp CCTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh
Confidence 57889999998765
No 108
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.66 E-value=4e-05 Score=75.96 Aligned_cols=75 Identities=15% Similarity=0.224 Sum_probs=60.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccc--cceeeEcCCCcccCCCCCCCcccccccccC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGH--YPMLLWGSPSKFVAGSWEPNQEKKEIRALE 79 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~g--YPTLklf~p~~~~~G~~~~~~~~~~i~~y~ 79 (437)
+.+.|.|+++|+.+++ .|.|+.|||....+..+|++|+|++ +||+++|..+. . ...|.
T Consensus 151 ~~~~~~~~~~A~~~~~-------~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~----~---------~~ky~ 210 (361)
T 3uem_A 151 DGKLSNFKTAAESFKG-------KILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE----E---------MTKYK 210 (361)
T ss_dssp HHHHHHHHHHHGGGTT-------TCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---------------CCEEC
T ss_pred HHHHHHHHHHHHHccC-------ceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC----c---------ccccC
Confidence 3578999999999986 5999999999544599999999998 99999984321 1 11233
Q ss_pred ---CCCCHHHHHHHHHHhcc
Q 013733 80 ---DWQTADGLLTWINKQTS 96 (437)
Q Consensus 80 ---g~Rtae~Iv~~i~k~l~ 96 (437)
|.++.+.|.+|+.+.+.
T Consensus 211 ~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 211 PESEELTAERITEFCHRFLE 230 (361)
T ss_dssp CSSCCCCHHHHHHHHHHHHT
T ss_pred CCccccCHHHHHHHHHHHhc
Confidence 78999999999999875
No 109
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.58 E-value=1.8e-05 Score=67.71 Aligned_cols=74 Identities=11% Similarity=-0.007 Sum_probs=56.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEec---------ccccCcchhccCcccccceeeEcCCCcccCCCCCCCccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDC---------ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEK 72 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDC---------a~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~ 72 (437)
+.+.|.++++++.++ +.+++||| +.+ .+++++|+|+++||+.+|. +|.
T Consensus 47 ~~~~p~l~~l~~~~~---------v~~~~vd~~~~~~~~~~d~~--~~l~~~~~v~~~Pt~~~~~-----~G~------- 103 (135)
T 3emx_A 47 HRDWPQLIQASKEVD---------VPIVMFIWGSLIGERELSAA--RLEMNKAGVEGTPTLVFYK-----EGR------- 103 (135)
T ss_dssp HHHHHHHHHHHTTCC---------SCEEEEEECTTCCHHHHHHH--HHHHHHHTCCSSSEEEEEE-----TTE-------
T ss_pred hHhChhHHHHHHHCC---------CEEEEEECCCchhhhhhhhh--HHHHHHcCCceeCeEEEEc-----CCE-------
Confidence 467899999987542 77899999 544 8999999999999999984 332
Q ss_pred ccccccCCCCCHHHHHHHHHHhcccCC
Q 013733 73 KEIRALEDWQTADGLLTWINKQTSRSY 99 (437)
Q Consensus 73 ~~i~~y~g~Rtae~Iv~~i~k~l~~~~ 99 (437)
.+..+.|..+.+.+.+++++.+..+.
T Consensus 104 -~v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 104 -IVDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp -EEEEEESCCCHHHHHHHHHHHC----
T ss_pred -EEEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 23456789999999999998876543
No 110
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.73 E-value=1e-05 Score=68.10 Aligned_cols=80 Identities=18% Similarity=0.324 Sum_probs=59.9
Q ss_pred CcchhHH---HHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCccccccccc
Q 013733 2 RNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL 78 (437)
Q Consensus 2 k~faP~f---ekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y 78 (437)
+.+.|.+ +++++.+++ .+.+..||+..+.+..++++|+|+++||+.+|.+. +|.. ..+..+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~-------~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~---~G~~------~~~~~~ 98 (130)
T 2lst_A 35 QQMNTFVLSDPGVSRLLEA-------RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK---AGAW------EEVGRL 98 (130)
Confidence 5678898 888887654 48899999976567899999999999999998321 2221 002345
Q ss_pred CCCCCHHHHHHHHHHhccc
Q 013733 79 EDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 79 ~g~Rtae~Iv~~i~k~l~~ 97 (437)
.|..+.+.|.++|++.+..
T Consensus 99 ~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 99 FGSRPRAEFLKELRQVCVK 117 (130)
Confidence 6888899999999887753
No 111
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.57 E-value=4.9e-05 Score=70.34 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=56.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++|+.+. .|.+++|||+.+ .++|++|+|++|||+++ +|. +..|.|.
T Consensus 152 ~~~~~~~~~~~~~~~--------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~-------~G~---------~~~~~G~ 205 (229)
T 2ywm_A 152 PSAAVMAWDFALAND--------YITSKVIDASEN--QDLAEQFQVVGVPKIVI-------NKG---------VAEFVGA 205 (229)
T ss_dssp HHHHHHHHHHHHHCT--------TEEEEEEEGGGC--HHHHHHTTCCSSSEEEE-------GGG---------TEEEESC
T ss_pred HHHHHHHHHHHHHCC--------CeEEEEEECCCC--HHHHHHcCCcccCEEEE-------CCE---------EEEeeCC
Confidence 357899999999872 499999999975 89999999999999987 221 2236789
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
++.+.|.+|+++.++
T Consensus 206 ~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 206 QPENAFLGYIMAVYE 220 (229)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999999988764
No 112
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.55 E-value=3e-05 Score=66.40 Aligned_cols=75 Identities=11% Similarity=0.256 Sum_probs=55.5
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.|+++++.+ .|.+++||++.+ .+++++|+|+++||+.+|.. .+|.. ..+..+.|.
T Consensus 56 ~~~~p~l~~l~~~~---------~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~~---~~g~g------~~~~~~~G~ 115 (133)
T 3cxg_A 56 NKIKEYFKNQLNYY---------YVTLVDIDVDIH--PKLNDQHNIKALPTFEFYFN---LNNEW------VLVHTVEGA 115 (133)
T ss_dssp HHTHHHHHGGGGTE---------ECEEEEEETTTC--HHHHHHTTCCSSSEEEEEEE---ETTEE------EEEEEEESC
T ss_pred HHHHHHHHHHHHhc---------CEEEEEEeccch--HHHHHhcCCCCCCEEEEEEe---cCCCe------EEEEEEcCC
Confidence 45789999888755 288999999875 89999999999999999720 12220 012345566
Q ss_pred CCHHHHHHHHHHhccc
Q 013733 82 QTADGLLTWINKQTSR 97 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~~ 97 (437)
+.+.|.++|++.+..
T Consensus 116 -~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 116 -NQNDIEKAFQKYCLE 130 (133)
T ss_dssp -CHHHHHHHHHHHSEE
T ss_pred -CHHHHHHHHHHHHHh
Confidence 789999999988753
No 113
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.53 E-value=1.7e-05 Score=65.74 Aligned_cols=71 Identities=8% Similarity=0.082 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc--ccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE 79 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~--e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~ 79 (437)
+.+.|.++++++.++. .|.+..+|... ..+.+++++|+|+++||+.+|. +|. .+..+.
T Consensus 45 ~~~~p~l~~~~~~~~~-------~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~-----~G~--------~~~~~~ 104 (118)
T 1zma_A 45 RKFAGTLSGVVAETKA-------HIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHIT-----DGQ--------INVRCD 104 (118)
T ss_dssp HHHHHHHHHHHHHHCC-------CCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEE-----TTE--------EEEECC
T ss_pred HHHHHHHHHHHHhcCC-------eEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEE-----CCE--------EEEEec
Confidence 4688999999998763 36665333221 1236899999999999999974 332 133567
Q ss_pred CCCCHHHHHHHHH
Q 013733 80 DWQTADGLLTWIN 92 (437)
Q Consensus 80 g~Rtae~Iv~~i~ 92 (437)
|.++.+.|.+||+
T Consensus 105 G~~~~~~l~~~l~ 117 (118)
T 1zma_A 105 SSMSAQEIKDFAG 117 (118)
T ss_dssp TTCCHHHHHHHHT
T ss_pred CCCCHHHHHHHhh
Confidence 8899999999985
No 114
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.48 E-value=6e-05 Score=62.93 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=54.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+ + .+.+++|||+.+ .+++++|+|.++||+.+|..+. ..|. .+..+.|.
T Consensus 39 ~~~~~~l~~l~~~~-~-------~v~~~~vd~~~~--~~~~~~~~i~~~Pt~~~~~~~~-~~G~--------~~~~~~G~ 99 (118)
T 2f51_A 39 QRLGQILPSIAEAN-K-------DVTFIKVDVDKN--GNAADAYGVSSIPALFFVKKEG-NEIK--------TLDQFVGA 99 (118)
T ss_dssp HHHHHHHHHHHHHC-T-------TSEEEEEETTTC--HHHHHHTTCCSSSEEEEEEEET-TEEE--------EEEEEESC
T ss_pred HHHHHHHHHHHHHC-C-------CeEEEEEECCCC--HHHHHhcCCCCCCEEEEEeCCC-Ccce--------EEEeecCC
Confidence 46789999999988 2 499999999975 8999999999999999984310 0121 13344565
Q ss_pred CCHHHHHHHHHHhcc
Q 013733 82 QTADGLLTWINKQTS 96 (437)
Q Consensus 82 Rtae~Iv~~i~k~l~ 96 (437)
.+ +.|.+.+++...
T Consensus 100 ~~-~~l~~~~~~~~~ 113 (118)
T 2f51_A 100 DV-SRIKADIEKFKH 113 (118)
T ss_dssp CH-HHHHHHHHHHC-
T ss_pred CH-HHHHHHHHHhhh
Confidence 54 568888877654
No 115
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.45 E-value=4.5e-05 Score=63.40 Aligned_cols=61 Identities=13% Similarity=0.256 Sum_probs=46.7
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccc----cCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRA 77 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e----~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~ 77 (437)
++++|.|+++|+.++ .|||+.+ .+.++|++|+|++|||+++ +|. .
T Consensus 28 ~~~~p~~~~~a~~~~-------------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i-------~G~-----------~ 76 (106)
T 3kp8_A 28 QDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITSYPTWII-------NGR-----------T 76 (106)
T ss_dssp HHHHHHHGGGGGGSC-------------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE-------TTE-----------E
T ss_pred HHHHHHHHHHHHhCC-------------EEEEecccccchhHHHHHHcCCeEeCEEEE-------CCE-----------E
Confidence 468899999986442 5788732 3589999999999999876 221 2
Q ss_pred cCCCCCHHHHHHHHHH
Q 013733 78 LEDWQTADGLLTWINK 93 (437)
Q Consensus 78 y~g~Rtae~Iv~~i~k 93 (437)
|.|.++.+.|.+|+.-
T Consensus 77 ~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 77 YTGVRSLEALAVASGY 92 (106)
T ss_dssp EESCCCHHHHHHHHTC
T ss_pred ecCCCCHHHHHHHhCC
Confidence 6789999999999743
No 116
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.41 E-value=0.00035 Score=59.83 Aligned_cols=74 Identities=11% Similarity=0.005 Sum_probs=50.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCC-
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED- 80 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g- 80 (437)
+.+.|.|+++|+.+. .+.|++||++.. . .+|+|+++||+.+|. +|... ....+...+.|
T Consensus 46 ~~~~p~l~~la~~~~--------~v~~~~vd~~~~--~---~~~~i~~~Pt~~~~~-----~G~~v--~~~~G~~~~~~~ 105 (135)
T 2dbc_A 46 LVVNQHLSVLARKFP--------ETKFVKAIVNSC--I---EHYHDNCLPTIFVYK-----NGQIE--GKFIGIIECGGI 105 (135)
T ss_dssp HHHHHHHHHHHHHCS--------SEEEEEECCSSS--C---SSCCSSCCSEEEEES-----SSSCS--EEEESTTTTTCT
T ss_pred HHHHHHHHHHHHHCC--------CcEEEEEEhhcC--c---ccCCCCCCCEEEEEE-----CCEEE--EEEEeEEeeCCC
Confidence 468899999999873 399999999865 2 799999999999984 33210 00011111111
Q ss_pred CCCHHHHHHHHHHhc
Q 013733 81 WQTADGLLTWINKQT 95 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l 95 (437)
..+.+.|.+++.+..
T Consensus 106 ~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 106 NLKLEELEWKLSEVG 120 (135)
T ss_dssp TCCHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHcC
Confidence 137888999988763
No 117
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=97.41 E-value=6.5e-05 Score=70.51 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=51.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|+|+++|+.+. .|.|++|||+ + ..++.+|+|.++||+++|..|.. +..+.|.
T Consensus 136 ~~l~p~l~~la~~~~--------~v~f~~vd~~-~--~~l~~~~~i~~~PTl~~~~~G~~-------------v~~~~G~ 191 (217)
T 2trc_P 136 DALNSSLECLAAEYP--------MVKFCKIRAS-N--TGAGDRFSSDVLPTLLVYKGGEL-------------ISNFISV 191 (217)
T ss_dssp HHHHHHHHHHHTTCT--------TSEEEEEEHH-H--HTCSTTSCGGGCSEEEEEETTEE-------------EEEETTG
T ss_pred HHHHHHHHHHHHHCC--------CeEEEEEECC-c--HHHHHHCCCCCCCEEEEEECCEE-------------EEEEeCC
Confidence 467899999998773 3999999998 4 89999999999999999853321 1223333
Q ss_pred C-------CHHHHHHHHHHh
Q 013733 82 Q-------TADGLLTWINKQ 94 (437)
Q Consensus 82 R-------tae~Iv~~i~k~ 94 (437)
+ +.+.|..|+.+.
T Consensus 192 ~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 192 AEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp GGGSCSSCCHHHHHHHHHTT
T ss_pred cccCcccCCHHHHHHHHHHc
Confidence 3 358888888754
No 118
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.39 E-value=0.00016 Score=61.53 Aligned_cols=76 Identities=9% Similarity=0.197 Sum_probs=55.4
Q ss_pred CcchhHH---HHHHHHhCCCCCCCCcceEEEEEeccc--ccCcchhccCcccccceeeEcCCCcccCCCCCCCccccccc
Q 013733 2 RNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIR 76 (437)
Q Consensus 2 k~faP~f---ekaA~~l~~~~~~~~~~V~~akVDCa~--e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~ 76 (437)
+.+.|.+ +++++.+++ +.+.+|||+. +.+.+++++|+|.++||+++|. .+|... ...
T Consensus 47 ~~~~~~~~~~~~l~~~~~~--------~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d----~~G~~v------~~~ 108 (134)
T 2fwh_A 47 KEFEKYTFSDPQVQKALAD--------TVLLQANVTANDAQDVALLKHLNVLGLPTILFFD----GQGQEH------PQA 108 (134)
T ss_dssp HHHHHHTTTSHHHHHHTTT--------SEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEEC----TTSCBC------GGG
T ss_pred HHHHHHhcCCHHHHHHhcC--------cEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEEC----CCCCEe------eee
Confidence 3467888 888887752 8899999954 2348999999999999999982 233210 002
Q ss_pred ccCCCCCHHHHHHHHHHhc
Q 013733 77 ALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 77 ~y~g~Rtae~Iv~~i~k~l 95 (437)
.+.|..+.+.|.+++++.-
T Consensus 109 ~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 109 RVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp CBCSCCCHHHHHHHHHHC-
T ss_pred eeeeccCHHHHHHHHHhcC
Confidence 4678899999999997654
No 119
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.36 E-value=9.3e-05 Score=62.20 Aligned_cols=71 Identities=11% Similarity=0.049 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc-----ccCcchhccCcccccceeeEcCCCcccCCCCCCCccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIR 76 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~-----e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~ 76 (437)
+.+.|.++++++.+.+ .+.+++||+.. +.+..++.+|+|+++||+.+|.. +. .+.
T Consensus 47 ~~~~p~l~~~~~~~~~-------~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~-----~~--------~~~ 106 (123)
T 1wou_A 47 VQAEPVVREGLKHISE-------GCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGT-----PQ--------KLV 106 (123)
T ss_dssp HHHHHHHHHHGGGCCT-------TEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTS-----SC--------EEE
T ss_pred HHhhHHHHHHHHHcCC-------CcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcC-----Cc--------eEe
Confidence 4678999999987764 49999999931 13489999999999999999843 21 111
Q ss_pred ccCCCCCHHHHHHHHHH
Q 013733 77 ALEDWQTADGLLTWINK 93 (437)
Q Consensus 77 ~y~g~Rtae~Iv~~i~k 93 (437)
.+.+ .+.+.|.+||.+
T Consensus 107 g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 107 ESEC-LQANLVEMLFSE 122 (123)
T ss_dssp GGGG-GCHHHHHHHHHC
T ss_pred cccc-CCHHHHHHHHhc
Confidence 2222 467788888754
No 120
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.29 E-value=0.00017 Score=60.72 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=53.7
Q ss_pred CcchhHHH--HHHHHhCCCCCCCCcceEEEEEec---ccccCcchhccCcc---cccceeeEc-CCCcccCCCCCCCccc
Q 013733 2 RNYKPQYE--KVARLFNGPNAAHPGIILMTRVDC---ALKINTNLCDKFSV---GHYPMLLWG-SPSKFVAGSWEPNQEK 72 (437)
Q Consensus 2 k~faP~fe--kaA~~l~~~~~~~~~~V~~akVDC---a~e~N~~lC~~f~V---~gYPTLklf-~p~~~~~G~~~~~~~~ 72 (437)
+.+.|.++ ++++.+++ .+.+.+||+ .. +.+++++|+| .++||+.+| +.|..
T Consensus 45 ~~~~~~l~~~~~~~~~~~-------~~~~~~vd~~~~~~--~~~l~~~~~v~~~~~~Pt~~~~d~~G~~----------- 104 (133)
T 3fk8_A 45 RALDKSLRNQKNTALIAK-------HFEVVKIDVGNFDR--NLELSQAYGDPIQDGIPAVVVVNSDGKV----------- 104 (133)
T ss_dssp HHHHHHHTSHHHHHHHHH-------HCEEEEEECTTTTS--SHHHHHHTTCGGGGCSSEEEEECTTSCE-----------
T ss_pred HHHHHHhCCHHHHHHhcC-------CEEEEEEeCCcccc--hHHHHHHhCCccCCccceEEEECCCCCE-----------
Confidence 45789999 99998864 599999999 54 4899999999 999999998 33311
Q ss_pred ccccccCC-------CCCHHHHHHHHHHh
Q 013733 73 KEIRALED-------WQTADGLLTWINKQ 94 (437)
Q Consensus 73 ~~i~~y~g-------~Rtae~Iv~~i~k~ 94 (437)
+..+.| ..+.+.|.+|+++.
T Consensus 105 --~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 105 --RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp --EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred --EEEecCCcccccccCCHHHHHHHHHHh
Confidence 112223 46888999988764
No 121
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.17 E-value=0.00028 Score=66.90 Aligned_cols=72 Identities=7% Similarity=0.010 Sum_probs=54.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcc--eEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGI--ILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE 79 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~--V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~ 79 (437)
+.++|.++++|+...... ++ |.|++|||+.+ .++|.+|+|+++||+.+| .+ + ..|.
T Consensus 43 ~~~~~~l~ela~~~~~~~----~~~~v~~~~vd~d~~--~~~~~~~gv~~~Pt~~i~-~g----~-----------~~~~ 100 (243)
T 2hls_A 43 EDTLRLMKLFEEESPTRN----GGKLLKLNVYYRESD--SDKFSEFKVERVPTVAFL-GG----E-----------VRWT 100 (243)
T ss_dssp HHHHHHHHHHHHHSCEET----TEESEEEEEEETTTT--HHHHHHTTCCSSSEEEET-TT----T-----------EEEE
T ss_pred HHHHHHHHHHHHhccCCC----CCceeEEEEecCCcC--HHHHHhcCCCcCCEEEEE-CC----c-----------eeEc
Confidence 357899999998742100 13 99999999865 899999999999999997 21 1 2466
Q ss_pred CCCCHHHHHHHHHHhc
Q 013733 80 DWQTADGLLTWINKQT 95 (437)
Q Consensus 80 g~Rtae~Iv~~i~k~l 95 (437)
|.++.+.+..|+...+
T Consensus 101 G~~~~~~l~~fv~~~l 116 (243)
T 2hls_A 101 GIPAGEEIRALVEVIM 116 (243)
T ss_dssp SCCCTTHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHH
Confidence 7777788888887654
No 122
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.14 E-value=0.00029 Score=53.42 Aligned_cols=61 Identities=5% Similarity=0.053 Sum_probs=47.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.+.|.++++++.+++ .+.+.+|| +.+++++|+|+++||+.+ +|. + ...|.
T Consensus 15 ~~~~~~l~~~~~~~~~-------~~~~~~v~-----~~~~~~~~~v~~~Pt~~~-------~G~---------~-~~~G~ 65 (77)
T 1ilo_A 15 QMLEKNAREAVKELGI-------DAEFEKIK-----EMDQILEAGLTALPGLAV-------DGE---------L-KIMGR 65 (77)
T ss_dssp HHHHHHHHHHHHHTTC-------CEEEEEEC-----SHHHHHHHTCSSSSCEEE-------TTE---------E-EECSS
T ss_pred HHHHHHHHHHHHHcCC-------ceEEEEec-----CHHHHHHCCCCcCCEEEE-------CCE---------E-EEcCC
Confidence 4678999999998864 48999999 378999999999999987 222 1 12277
Q ss_pred C-CHHHHHHHH
Q 013733 82 Q-TADGLLTWI 91 (437)
Q Consensus 82 R-tae~Iv~~i 91 (437)
. +.+.|.+|+
T Consensus 66 ~~~~~~l~~~l 76 (77)
T 1ilo_A 66 VASKEEIKKIL 76 (77)
T ss_dssp CCCHHHHHHHC
T ss_pred CCCHHHHHHHh
Confidence 6 888888775
No 123
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.98 E-value=0.00069 Score=57.52 Aligned_cols=45 Identities=9% Similarity=0.023 Sum_probs=37.6
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPS 59 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~ 59 (437)
|.|.|.++++|+.+. .++|.+||++.. ..+|+|++.||+.+|..|
T Consensus 39 ~~~~p~l~~la~~~~--------~v~f~kvd~d~~-----~~~~~v~~~PT~~~fk~G 83 (118)
T 3evi_A 39 LLVNQHLSLLARKFP--------ETKFVKAIVNSC-----IQHYHDNCLPTIFVYKNG 83 (118)
T ss_dssp HHHHHHHHHHHHHCT--------TSEEEEEEGGGT-----STTCCGGGCSEEEEEETT
T ss_pred HHHHHHHHHHHHHCC--------CCEEEEEEhHHh-----HHHCCCCCCCEEEEEECC
Confidence 468999999999874 389999998753 589999999999998543
No 124
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.96 E-value=0.00042 Score=66.45 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=53.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCC-
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED- 80 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g- 80 (437)
+.+.|+|+++|+.+.+ |.|++||++. ..++.+|+|.++||+++|..|.... ...+.....|
T Consensus 149 k~l~p~l~~La~~~~~--------v~f~kVd~d~---~~l~~~~~I~~~PTll~~~~G~~v~-------~~vG~~~~~g~ 210 (245)
T 1a0r_P 149 DALNSSLICLAAEYPM--------VKFCKIKASN---TGAGDRFSSDVLPTLLVYKGGELLS-------NFISVTEQLAE 210 (245)
T ss_dssp HHHHHHHHHHHHHCTT--------SEEEEEEHHH---HCCTTSSCTTTCSEEEEEETTEEEE-------EETTGGGGSCT
T ss_pred HHHHHHHHHHHHHCCC--------CEEEEEeCCc---HHHHHHCCCCCCCEEEEEECCEEEE-------EEeCCcccccc
Confidence 4678999999998752 9999999975 5799999999999999985442211 0011111112
Q ss_pred CCCHHHHHHHHHHh
Q 013733 81 WQTADGLLTWINKQ 94 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~ 94 (437)
.++.+.|..|+.+.
T Consensus 211 ~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 211 EFFTGDVESFLNEY 224 (245)
T ss_dssp TCCHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHc
Confidence 25788888888765
No 125
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.93 E-value=0.00063 Score=59.49 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=54.8
Q ss_pred CcchhHH---HHHHHHhCCCCCCCCcceEEEEEeccccc---------CcchhccCcccccceeeEcCCCcccCCCCCCC
Q 013733 2 RNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKI---------NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPN 69 (437)
Q Consensus 2 k~faP~f---ekaA~~l~~~~~~~~~~V~~akVDCa~e~---------N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~ 69 (437)
+.+.|++ +++++.++. .+.+.+||++... +..++++|+|.++||++++. .+|..
T Consensus 64 ~~~~p~l~~~~~~~~~~~~-------~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d----~~G~~--- 129 (154)
T 2ju5_A 64 IKMQDQILQSSEFKHFAGV-------HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFID----AEGKQ--- 129 (154)
T ss_dssp HHHHHHTTTSHHHHHHHHH-------HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEEC----TTCCE---
T ss_pred HHHHHHHhcCHHHHHHhcC-------cEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEc----CCCCE---
Confidence 3567777 677666542 5889999998641 35899999999999999983 23321
Q ss_pred cccccccccCCCC--CHHHHHHHHHHhcc
Q 013733 70 QEKKEIRALEDWQ--TADGLLTWINKQTS 96 (437)
Q Consensus 70 ~~~~~i~~y~g~R--tae~Iv~~i~k~l~ 96 (437)
+..+ |.. +.+.|+++|++.+.
T Consensus 130 -----~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 130 -----LARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp -----EEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred -----EEEe-cCCCCCHHHHHHHHHHHHh
Confidence 2344 666 89999999988765
No 126
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.70 E-value=0.00041 Score=68.28 Aligned_cols=60 Identities=13% Similarity=0.268 Sum_probs=45.7
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc----ccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRA 77 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~----e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~ 77 (437)
|+++|+|+++|+.++ +|||+. ++|+++|++|+|++|||+.+ +|. .
T Consensus 213 k~l~p~le~lA~~l~-------------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i-------~G~-----------~ 261 (291)
T 3kp9_A 213 QDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITSYPTWII-------NGR-----------T 261 (291)
T ss_dssp HHHHHHHGGGGGGSC-------------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE-------TTE-----------E
T ss_pred HHHHHHHHHHHHHcC-------------EEEEeecCchhhHHHHHHHcCCcccCeEEE-------CCE-----------E
Confidence 578999999986441 577772 23689999999999999654 331 2
Q ss_pred cCCCCCHHHHHHHHH
Q 013733 78 LEDWQTADGLLTWIN 92 (437)
Q Consensus 78 y~g~Rtae~Iv~~i~ 92 (437)
|.|.++.++|.+|++
T Consensus 262 ~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 262 YTGVRSLEALAVASG 276 (291)
T ss_dssp EESCCCHHHHHHHTC
T ss_pred ecCCCCHHHHHHHHC
Confidence 679999999999974
No 127
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.64 E-value=0.0029 Score=52.14 Aligned_cols=73 Identities=16% Similarity=0.157 Sum_probs=55.5
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc---------------------ccCcchhccCcccccceeeEcCCCcc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------KINTNLCDKFSVGHYPMLLWGSPSKF 61 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~---------------------e~N~~lC~~f~V~gYPTLklf~p~~~ 61 (437)
.+.|.++++++.+. + +.+..|++.. ..+..++++|+|.++||++++.
T Consensus 42 ~~~~~l~~~~~~~~--~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id---- 109 (136)
T 1zzo_A 42 GEAPVVGQVAASHP--E------VTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVD---- 109 (136)
T ss_dssp HHHHHHHHHHHHCT--T------SEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEEC----
T ss_pred HHHHHHHHHHHHcC--C------eEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEEC----
Confidence 46789999998876 2 7888899854 2357899999999999999983
Q ss_pred cCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 62 VAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 62 ~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
.+|.. + .+.|..+.+.|.++|++.+.
T Consensus 110 ~~g~i--------~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 110 PHGNV--------D-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp TTCCE--------E-EEESCCCHHHHHHHHHHHC-
T ss_pred CCCCE--------E-EEecCCCHHHHHHHHHHHhc
Confidence 23321 2 45688899999999988763
No 128
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.60 E-value=0.0025 Score=53.44 Aligned_cols=76 Identities=13% Similarity=0.095 Sum_probs=57.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc-------------------------ccCcchhccCcccccceeeEc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------KINTNLCDKFSVGHYPMLLWG 56 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~-------------------------e~N~~lC~~f~V~gYPTLklf 56 (437)
+.+.|+++++++.+.+ .+.|..|+++. ..+..+++.|+|.++||+.++
T Consensus 45 ~~~~~~l~~l~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~li 117 (148)
T 2b5x_A 45 KEAMPQVNEFRDKYQD-------QLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVF 117 (148)
T ss_dssp HHHHHHHHHHHHHHTT-------TSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEE
T ss_pred HHHhHHHHHHHHHhcC-------CcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEE
Confidence 3568999999998875 38888898753 335789999999999999998
Q ss_pred CCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 57 SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 57 ~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
- .+|.. +..+.|..+.+.|.++|++.+.
T Consensus 118 d----~~G~i--------~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 118 D----KTGQL--------RHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp C----TTCBE--------EEEEESCSTTHHHHHHHHHHHT
T ss_pred C----CCCcE--------EEEecCCCCHHHHHHHHHHHHh
Confidence 2 22321 2334577889999999988765
No 129
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.58 E-value=0.0028 Score=53.00 Aligned_cols=72 Identities=14% Similarity=0.177 Sum_probs=54.7
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc-----------------------ccCcchhccCcccccceeeEcCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTNLCDKFSVGHYPMLLWGSP 58 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~-----------------------e~N~~lC~~f~V~gYPTLklf~p 58 (437)
+.+.|.++++++.+... .+.|..|++.. ..+..++++|+|.++||++++-
T Consensus 50 ~~~~~~l~~~~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid- 122 (145)
T 3erw_A 50 KKELPQFQSFYDAHPSD------SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLN- 122 (145)
T ss_dssp HHHHHHHHHHHHHCCCS------SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEEC-
T ss_pred HHHHHHHHHHHHHcCCC------CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEc-
Confidence 35689999999998753 48899999865 2247899999999999999972
Q ss_pred CcccCCCCCCCcccccccccCCCCCHHHHHHHH
Q 013733 59 SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 91 (437)
Q Consensus 59 ~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i 91 (437)
++|.. +..+.|..+.+.|.++|
T Consensus 123 ---~~G~i--------~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 123 ---EKGEI--------EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp ---TTCCE--------EEEEESCCCHHHHHHHH
T ss_pred ---CCCcE--------EEEEcCCcCHHHHHHhh
Confidence 23321 23456888999998876
No 130
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.47 E-value=0.0039 Score=51.56 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=54.6
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc--------------------ccCcchhccCcccccceeeEcCCCccc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------KINTNLCDKFSVGHYPMLLWGSPSKFV 62 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~--------------------e~N~~lC~~f~V~gYPTLklf~p~~~~ 62 (437)
.+.|+++++++.+. + +.+..|++.. ..+..++++|+|.++||+.++. .
T Consensus 41 ~~~~~l~~~~~~~~--~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid----~ 108 (136)
T 1lu4_A 41 AEAPSLSQVAAANP--A------VTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYR----A 108 (136)
T ss_dssp HHHHHHHHHHHHCT--T------SEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEEC----T
T ss_pred HHHHHHHHHHHHCC--C------cEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEEC----C
Confidence 46789999999886 2 8888999876 1247899999999999999983 2
Q ss_pred CCCCCCCcccccccccC---CCCCHHHHHHHHHHhc
Q 013733 63 AGSWEPNQEKKEIRALE---DWQTADGLLTWINKQT 95 (437)
Q Consensus 63 ~G~~~~~~~~~~i~~y~---g~Rtae~Iv~~i~k~l 95 (437)
+|.. + .+. |..+.+.|.++|++.+
T Consensus 109 ~G~i--------~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 109 DGTS--------T-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TSCE--------E-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCcE--------E-EEEcCCCccCHHHHHHHHHHHh
Confidence 3321 2 355 7889999999998754
No 131
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.40 E-value=0.0071 Score=51.30 Aligned_cols=78 Identities=14% Similarity=0.202 Sum_probs=58.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc---------------------CcchhccCcccccceeeEcCCCc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI---------------------NTNLCDKFSVGHYPMLLWGSPSK 60 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~---------------------N~~lC~~f~V~gYPTLklf~p~~ 60 (437)
+.+.|.++++++.+.+. .+.+..|+++.+. +..+++.|+|.++||++++-+
T Consensus 46 ~~~~~~l~~l~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~-- 117 (152)
T 2lja_A 46 RGELPALKELEEKYAGK------DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDR-- 117 (152)
T ss_dssp GGTHHHHHHHHHHSTTS------SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECT--
T ss_pred HHHhHHHHHHHHHhccC------CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECC--
Confidence 46789999999988764 3889999988652 237999999999999999732
Q ss_pred ccCCCCCCCcccccccccCCCCCHHHHHHHHHHhccc
Q 013733 61 FVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 61 ~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~~ 97 (437)
+|.. +..+.|..+.+.|.++|++.+..
T Consensus 118 --~G~i--------~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 118 --DGKI--------ISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp --TSCE--------EESSCCCTTCHHHHHHHHHHHTC
T ss_pred --CCeE--------EEccCCCCCHHHHHHHHHHHhcc
Confidence 3321 22345777889999999887753
No 132
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.24 E-value=0.0031 Score=55.51 Aligned_cols=67 Identities=15% Similarity=0.193 Sum_probs=47.9
Q ss_pred HHHHHHhCCCCCCCCcceEEEEEecccccCcch--------------------------hccCcccccceeeEcCCCccc
Q 013733 9 EKVARLFNGPNAAHPGIILMTRVDCALKINTNL--------------------------CDKFSVGHYPMLLWGSPSKFV 62 (437)
Q Consensus 9 ekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~l--------------------------C~~f~V~gYPTLklf~p~~~~ 62 (437)
.++++.+++ .+.+.+||++.+ .++ +.+|+|+++||++++. .
T Consensus 73 ~~~~~~~~~-------~~~~v~v~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid----~ 139 (172)
T 3f9u_A 73 PKVSSIINN-------DYVLITLYVDNK--TPLTEPVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLID----N 139 (172)
T ss_dssp HHHHHHHHH-------HCEEEEEETTCC--CEEEEEEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEEC----T
T ss_pred HHHHHHhcC-------CEEEEEEecCcc--cccchhhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEEC----C
Confidence 455555543 488999999865 444 7899999999999983 2
Q ss_pred CCCCCCCcccccccccCCCCC-HHHHHHHHHHhcc
Q 013733 63 AGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQTS 96 (437)
Q Consensus 63 ~G~~~~~~~~~~i~~y~g~Rt-ae~Iv~~i~k~l~ 96 (437)
+|.. +..+.|..+ .+.|.+|+++.+.
T Consensus 140 ~G~~--------~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 140 EGNP--------LNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp TSCB--------SSCCBCSCCCHHHHHHHHHHHHH
T ss_pred CCCE--------EeeccCCCCCHHHHHHHHHHHHH
Confidence 3331 223457777 9999999988764
No 133
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.22 E-value=0.0042 Score=52.88 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=57.4
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc--------------------CcchhccCcccccceeeEcCCCccc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNLCDKFSVGHYPMLLWGSPSKFV 62 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~--------------------N~~lC~~f~V~gYPTLklf~p~~~~ 62 (437)
.+.|.++++++.+.+. .+.|..|++.... +..+++.|+|.++||++++- .
T Consensus 43 ~~~~~l~~~~~~~~~~------~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid----~ 112 (151)
T 2f9s_A 43 KEFPYMANQYKHFKSQ------GVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLIN----P 112 (151)
T ss_dssp HHHHHHHHHHHHHGGG------TEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEEC----T
T ss_pred HHHHHHHHHHHHhccC------CeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEEC----C
Confidence 4678999999998763 3888889986521 46899999999999998872 2
Q ss_pred CCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 63 AGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 63 ~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+|.. +..+.|..+.+.|.++|++.+.
T Consensus 113 ~G~i--------~~~~~G~~~~~~l~~~l~~ll~ 138 (151)
T 2f9s_A 113 EGKV--------VKVVTGTMTESMIHDYMNLIKP 138 (151)
T ss_dssp TSEE--------EEEEESCCCHHHHHHHHHHHSC
T ss_pred CCcE--------EEEEeCCCCHHHHHHHHHHHHh
Confidence 2321 2335577899999999988775
No 134
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.15 E-value=0.0042 Score=57.78 Aligned_cols=69 Identities=12% Similarity=0.086 Sum_probs=52.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC--
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-- 79 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~-- 79 (437)
+.+.|+|+++|+.+. .+.++.+. +.++|.+|+|.+ |||++|++. . +....|+
T Consensus 40 ~~~~~~f~~~A~~l~--------~~~F~~t~-----~~~v~~~~~v~~-p~i~lfk~~-----~-------~~~~~~~~~ 93 (227)
T 4f9z_D 40 IPAVPILHSMVQKFP--------GVSFGIST-----DSEVLTHYNITG-NTICLFRLV-----D-------NEQLNLEDE 93 (227)
T ss_dssp STHHHHHHHHTTTCT--------TSEEEEEC-----CHHHHHHTTCCS-SEEEEEETT-----T-------TEEEEECHH
T ss_pred chhHHHHHHHHHhCC--------CceEEEEC-----CHHHHHHcCCCC-CeEEEEEec-----C-------ccccccccc
Confidence 457899999999883 27887643 378999999998 999998532 1 1123466
Q ss_pred --CCCCHHHHHHHHHHhcc
Q 013733 80 --DWQTADGLLTWINKQTS 96 (437)
Q Consensus 80 --g~Rtae~Iv~~i~k~l~ 96 (437)
|.++.++|.+||.++..
T Consensus 94 ~~g~~~~~~l~~fi~~~~~ 112 (227)
T 4f9z_D 94 DIESIDATKLSRFIEINSL 112 (227)
T ss_dssp HHHTCCHHHHHHHHHHHCC
T ss_pred ccCCCCHHHHHHHHHHhCC
Confidence 47999999999998853
No 135
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.07 E-value=0.0073 Score=51.87 Aligned_cols=75 Identities=5% Similarity=0.042 Sum_probs=57.3
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccC---------------------------cccccceeeE
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF---------------------------SVGHYPMLLW 55 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f---------------------------~V~gYPTLkl 55 (437)
.+.|.++++++.+.+. .+.|..|++..+ .+.+.+| +|.++||+++
T Consensus 51 ~~~~~l~~l~~~~~~~------~v~~v~v~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~l 122 (165)
T 3or5_A 51 SEIPDMVQVQKTWASR------GFTFVGIAVNEQ--LPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFV 122 (165)
T ss_dssp HHHHHHHHHHHHHTTT------TEEEEEEECSCC--HHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEE
T ss_pred HHHHHHHHHHHHhccC------CeEEEEEECCCC--HHHHHHHHHHcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEE
Confidence 5679999999999864 389999999864 6666666 8999999988
Q ss_pred cCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhccc
Q 013733 56 GSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 56 f~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~~ 97 (437)
+- ++|.. +..+.|..+.+.|.++|++.+..
T Consensus 123 id----~~G~i--------~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 123 ID----ASGNV--------SGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp EC----TTSBE--------EEEECSCCCHHHHHHHHHHHHC-
T ss_pred EC----CCCcE--------EEEEcCCCCHHHHHHHHHHHHhh
Confidence 72 23321 23456888999999999988753
No 136
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.05 E-value=0.008 Score=55.83 Aligned_cols=75 Identities=21% Similarity=0.302 Sum_probs=56.4
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCccc--ccceeeEcCCCcccCCCCCCCcccccccccCC
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALED 80 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~--gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g 80 (437)
.+.+.|+++|+.+++ .+.++-||+..+.+..++..||+. ++|+|.++... ++.+ ...-.+
T Consensus 148 ~~~~~~~~vAk~~k~-------~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~---~~~k--------y~~~~~ 209 (227)
T 4f9z_D 148 ENMHRYQKAAKLFQG-------KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTL---DDEW--------DTLPTA 209 (227)
T ss_dssp HHHHHHHHHHHHTTT-------TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESS---SCCE--------EEETTC
T ss_pred HHHHHHHHHHHHhhC-------CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECC---CCcc--------ccCCcC
Confidence 467999999999986 599999999754457889999998 89999998422 1110 011125
Q ss_pred CCCHHHHHHHHHHhc
Q 013733 81 WQTADGLLTWINKQT 95 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l 95 (437)
.-+.+.|.+|++..+
T Consensus 210 ~~t~~~i~~Fv~~~~ 224 (227)
T 4f9z_D 210 EVSVEHVQNFCDGFL 224 (227)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 679999999998765
No 137
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=96.04 E-value=0.0062 Score=51.08 Aligned_cols=74 Identities=12% Similarity=0.026 Sum_probs=55.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcc-------------------------hhccCcccccceeeEc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN-------------------------LCDKFSVGHYPMLLWG 56 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~-------------------------lC~~f~V~gYPTLklf 56 (437)
+.+.|.++++++.+.+. .+.|..|++..+ .+ +++.|+|.++||++++
T Consensus 47 ~~~~~~l~~l~~~~~~~------~~~~v~v~~d~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~li 118 (148)
T 3hcz_A 47 QQETPKLYDWWLKNRAK------GIQVYAANIERK--DEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVL 118 (148)
T ss_dssp CSHHHHHHHHHHHHGGG------TEEEEEEECCSS--SHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEE
T ss_pred HHHHHHHHHHHHHhccC------CEEEEEEEecCC--HHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEE
Confidence 56789999999999864 389999998854 44 9999999999999998
Q ss_pred CCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 57 SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 57 ~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
- ++|.. +..+.|..+.+.+++.+.+.+
T Consensus 119 d----~~G~i--------~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 119 D----KNKVI--------IAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp C----TTCBE--------EEESCCGGGHHHHHHHHHHHH
T ss_pred C----CCCcE--------EEecCCHHHHHHHHHHHHHHh
Confidence 3 22321 223456677888888877654
No 138
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=96.02 E-value=0.0091 Score=50.97 Aligned_cols=77 Identities=13% Similarity=0.129 Sum_probs=57.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc----------------------ccCcchhccCc--ccccceeeEcC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------------------KINTNLCDKFS--VGHYPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~----------------------e~N~~lC~~f~--V~gYPTLklf~ 57 (437)
+.+.|+++++++.+++. .+.|..|+++. ..+..+++.|+ |.++||++++-
T Consensus 40 ~~~~~~l~~l~~~~~~~------~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid 113 (151)
T 3raz_A 40 RKEMPAMSKWYKAQKKG------SVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEA 113 (151)
T ss_dssp HHHHHHHHHHHHTSCTT------TEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEE
T ss_pred HHHHHHHHHHHHHhccC------CeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCccCCCCEEEEEC
Confidence 35679999999988654 48899999862 12356889999 99999998872
Q ss_pred CCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 58 PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 58 p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
++|.. +..+.|..+.+.|.++|++-..
T Consensus 114 ----~~G~i--------~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 114 ----PKCGY--------RQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp ----TTTTE--------EEECCSCCCHHHHHHHHHHHHT
T ss_pred ----CCCcE--------EEEECCCCCHHHHHHHHHHHHH
Confidence 23321 2356788999999999987653
No 139
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.94 E-value=0.0026 Score=56.31 Aligned_cols=82 Identities=12% Similarity=0.142 Sum_probs=50.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcc-hhccCcc--cccceeeEc-CCCcccCCCCCCCcccccccc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN-LCDKFSV--GHYPMLLWG-SPSKFVAGSWEPNQEKKEIRA 77 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~-lC~~f~V--~gYPTLklf-~p~~~~~G~~~~~~~~~~i~~ 77 (437)
+.+.|.|+++++.... .+.|..||++.+ .. ++.+|+| +++||+.+| +.|.... ..... .....
T Consensus 62 ~~~~p~l~~~~~~~~~-------~~~~~~v~~d~~--~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~-~~~G~---~~~~~ 128 (164)
T 1sen_A 62 KALKPKFAESTEISEL-------SHNFVMVNLEDE--EEPKDEDFSPDGGYIPRILFLDPSGKVHP-EIINE---NGNPS 128 (164)
T ss_dssp HHHHHHHHTCHHHHHH-------HTTSEEEEEEGG--GSCSCGGGCTTCSCSSEEEEECTTSCBCT-TCCCT---TSCTT
T ss_pred HHHHHHHHHHHHHhhc-------CCeEEEEEecCC--chHHHHHhcccCCcCCeEEEECCCCCEEE-EEeCC---CCccc
Confidence 4578999998776543 366777888765 44 8889998 669999998 3332111 00000 00000
Q ss_pred c-CCCCCHHHHHHHHHHhcc
Q 013733 78 L-EDWQTADGLLTWINKQTS 96 (437)
Q Consensus 78 y-~g~Rtae~Iv~~i~k~l~ 96 (437)
| ....+.+.|+++|++.+.
T Consensus 129 ~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 129 YKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp STTCCCSHHHHHHHHHHHHH
T ss_pred hhcccCCHHHHHHHHHHHHH
Confidence 0 113789999999987654
No 140
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=95.85 E-value=0.013 Score=49.10 Aligned_cols=74 Identities=8% Similarity=0.174 Sum_probs=53.3
Q ss_pred CcchhHHHHHHHHh-CCCCCCCCcceEEEEEeccccc-----------------------CcchhccCcccccceeeEcC
Q 013733 2 RNYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI-----------------------NTNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l-~~~~~~~~~~V~~akVDCa~e~-----------------------N~~lC~~f~V~gYPTLklf~ 57 (437)
+.+.|+++++++.+ .+. .+.|..|++.... +..++++|+|.++||++++-
T Consensus 49 ~~~~~~l~~l~~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid 122 (148)
T 3fkf_A 49 PEANAELKRLNKEYKKNK------NFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLS 122 (148)
T ss_dssp HHHHHHHHHHHHHTTTCT------TEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEEC
T ss_pred HHHhHHHHHHHHHhcCCC------CeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEEC
Confidence 45789999999999 553 3888889887643 46899999999999999972
Q ss_pred CCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 58 PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 58 p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
++|.. +.. . .+.+.|.++|++.+.
T Consensus 123 ----~~G~i--------~~~--~-~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 123 ----PTGKI--------LAR--D-IQGEALTGKLKELLK 146 (148)
T ss_dssp ----TTSBE--------EEE--S-CCHHHHHHHHHHHC-
T ss_pred ----CCCeE--------EEe--c-CCHHHHHHHHHHHHc
Confidence 22321 111 1 278888888887653
No 141
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=95.79 E-value=0.012 Score=58.12 Aligned_cols=68 Identities=19% Similarity=0.257 Sum_probs=53.5
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC-C
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW-Q 82 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~-R 82 (437)
..++|.++|..+.+ .+.|+.++ +.++|.+|+|. +|||++|++.. . ....|+|. +
T Consensus 157 ~~~~~~~~A~~~~~-------~~~f~~~~-----~~~~~~~~~v~-~p~i~~~~~~~----~--------~~~~y~g~~~ 211 (350)
T 1sji_A 157 YYKAFEEAAEHFQP-------YIKFFATF-----DKGVAKKLSLK-MNEVDFYEPFM----D--------EPIAIPDKPY 211 (350)
T ss_dssp HHHHHHHHHHHTTT-------TSEEEEEC-----CHHHHHHHTCC-TTCEEEECTTC----S--------SCEECSSSSC
T ss_pred HHHHHHHHHHhhcc-------CcEEEEEC-----CHHHHHHcCCC-CCcEEEEeCCC----C--------CceecCCCCC
Confidence 46899999999975 48898875 25799999999 99999996421 1 12358887 9
Q ss_pred CHHHHHHHHHHhcc
Q 013733 83 TADGLLTWINKQTS 96 (437)
Q Consensus 83 tae~Iv~~i~k~l~ 96 (437)
+.++|.+||.+...
T Consensus 212 ~~~~l~~fi~~~~~ 225 (350)
T 1sji_A 212 TEEELVEFVKEHQR 225 (350)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHcCc
Confidence 99999999988643
No 142
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.74 E-value=0.0078 Score=51.23 Aligned_cols=58 Identities=14% Similarity=0.103 Sum_probs=46.6
Q ss_pred eEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 26 ILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 26 V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+.+.+||-+.+.+.+++.+|+|++.||+.+|. +|. .+..+.|....+.|..|+++.+.
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~-----~G~--------ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMA-----GDV--------ESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEE-----TTE--------EEEEEECCCCHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEE-----CCE--------EEeeecCCCCHHHHHHHHHHHHh
Confidence 67888998876567899999999999999983 442 24456788999999999987664
No 143
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.66 E-value=0.011 Score=50.11 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=54.6
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc--------------------CcchhccCcccccceeeEcCCCccc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNLCDKFSVGHYPMLLWGSPSKFV 62 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~--------------------N~~lC~~f~V~gYPTLklf~p~~~~ 62 (437)
.+.|.++++++.+.+. .+.|..|++..+. +..+++.|+|.++||++++- .
T Consensus 45 ~~~~~l~~l~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid----~ 114 (152)
T 3gl3_A 45 QSFPWMNQMQAKYKAK------GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLID----R 114 (152)
T ss_dssp HHHHHHHHHHHHHGGG------TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEEC----T
T ss_pred HHHHHHHHHHHHhhcC------CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEEC----C
Confidence 4678999999999864 2888888887541 22788999999999988872 2
Q ss_pred CCCCCCCcccccccccCCC--CCHHHHHHHHHHhcccCCCCC
Q 013733 63 AGSWEPNQEKKEIRALEDW--QTADGLLTWINKQTSRSYGLD 102 (437)
Q Consensus 63 ~G~~~~~~~~~~i~~y~g~--Rtae~Iv~~i~k~l~~~~~l~ 102 (437)
+|.. +..+.|. .+.+.|.++|++.+......+
T Consensus 115 ~G~i--------~~~~~g~~~~~~~~l~~~i~~~~~~~~~~~ 148 (152)
T 3gl3_A 115 NGKV--------LLQHVGFRPADKEALEQQILAALGGNEGHH 148 (152)
T ss_dssp TSBE--------EEEEESCCTTTHHHHHHHHHHHTC------
T ss_pred CCCE--------EEEEccCCCcCHHHHHHHHHHHHccccccc
Confidence 2321 1223343 466899999999876544433
No 144
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=95.59 E-value=0.015 Score=49.28 Aligned_cols=77 Identities=14% Similarity=0.140 Sum_probs=55.5
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc---------------------cccCcchhccCcccccceeeEcCCCcc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCDKFSVGHYPMLLWGSPSKF 61 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa---------------------~e~N~~lC~~f~V~gYPTLklf~p~~~ 61 (437)
.+.|.++++++.+.+.+ +.+..|+.. ...+..+++.|+|.++||++++-
T Consensus 45 ~~~~~l~~l~~~~~~~~------~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid---- 114 (153)
T 2l5o_A 45 SEMPKIIKTANDYKNKN------FQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQVYPTSVLIG---- 114 (153)
T ss_dssp HHHHHHHHHHHHGGGTT------EEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCSSSEEEEEC----
T ss_pred HHHHHHHHHHHHhccCC------eEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCccCeEEEEC----
Confidence 46789999999887642 666655532 11247899999999999999873
Q ss_pred cCCCCCCCcccccccccCCCCCHHHHHHHHHHhccc
Q 013733 62 VAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 62 ~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~~ 97 (437)
.+|.. +..+.|..+.+.|.++|++.+..
T Consensus 115 ~~G~i--------~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 115 KKGEI--------LKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp SSSCC--------CEEEESSCCHHHHHHHHHHHHHC
T ss_pred CCCcE--------EEEEcCCCCHHHHHHHHHHHHHh
Confidence 23321 23456888999999999988753
No 145
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.41 E-value=0.016 Score=49.33 Aligned_cols=74 Identities=14% Similarity=0.106 Sum_probs=54.2
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc-------------------------ccCcchhccCcccccceeeEcC
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------KINTNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~-------------------------e~N~~lC~~f~V~gYPTLklf~ 57 (437)
.+.|.++++++.+ + +.|..|+++. ..+..++++|+|.++||++++-
T Consensus 47 ~~~~~l~~l~~~~-~--------v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid 117 (154)
T 3ia1_A 47 AEFPGLHRVAEET-G--------VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVD 117 (154)
T ss_dssp HHHHHHHHHHHHH-C--------CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEEC
T ss_pred HHHHHHHHHHHHc-C--------CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEEC
Confidence 4678999999988 3 6677788710 1247899999999999988872
Q ss_pred CCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhccc
Q 013733 58 PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 58 p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~~ 97 (437)
.+|.. +..+.|..+.+.|.++|++.+..
T Consensus 118 ----~~G~i--------~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 118 ----REGKV--------VALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp ----TTSEE--------EEEEESBCCHHHHHHHHHHTTCC
T ss_pred ----CCCCE--------EEEEcCCCCHHHHHHHHHhccCc
Confidence 23321 23456888999999999888753
No 146
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=95.32 E-value=0.025 Score=46.12 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=50.9
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc--------------------------ccCcchhccCcccccceeeEc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KINTNLCDKFSVGHYPMLLWG 56 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~--------------------------e~N~~lC~~f~V~gYPTLklf 56 (437)
...|.++++++.+.. .+.+..|++.. ..+..++++|+|.++||++++
T Consensus 39 ~~~~~l~~~~~~~~~-------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~li 111 (138)
T 4evm_A 39 ASLPDTDEIAKEAGD-------DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFI 111 (138)
T ss_dssp HHHHHHHHHHHTCTT-------TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHHHHHhCC-------CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEE
Confidence 457888888887432 47777886532 124679999999999999998
Q ss_pred CCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHH
Q 013733 57 SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 93 (437)
Q Consensus 57 ~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k 93 (437)
- ++|.. +..+.|..+.+.|.++|++
T Consensus 112 d----~~G~i--------~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 112 D----KEGKL--------VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp C----TTCCE--------EEEEESCCCHHHHHHHHHH
T ss_pred C----CCCcE--------EEeecCCCcHHHHHHHHHh
Confidence 3 23321 2345688899999998865
No 147
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=95.32 E-value=0.0082 Score=51.59 Aligned_cols=47 Identities=13% Similarity=0.196 Sum_probs=35.8
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+..++++|+|.++||++++- ++|.. +..+.|..+.+.|.++|++.+.
T Consensus 110 ~~~~~~~~~v~~~P~~~lid----~~G~i--------~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 110 GGTIAQNLNISVYPSWALIG----KDGDV--------QRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TCHHHHHTTCCSSSEEEEEC----TTSCE--------EEEEESCCCHHHHHHHHHCTTC
T ss_pred chHHHHHcCCCccceEEEEC----CCCcE--------EEEEcCCCCHHHHHHHHHHHHH
Confidence 37899999999999999972 23321 2335688899999999988764
No 148
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.03 E-value=0.044 Score=46.67 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=55.0
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecc--------------------------cccCcc------hhccCcccccc
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCA--------------------------LKINTN------LCDKFSVGHYP 51 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa--------------------------~e~N~~------lC~~f~V~gYP 51 (437)
+.|.++++++.+++. .|.|..|++. ...+.. +.++|+|.++|
T Consensus 49 ~~~~l~~l~~~~~~~------~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P 122 (160)
T 3lor_A 49 GVPQAQKIHRMIDES------QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTP 122 (160)
T ss_dssp HHHHHHHHHHHSCTT------TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSS
T ss_pred hhHHHHHHHHHhCcC------CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccc
Confidence 479999999999864 3888888863 111234 89999999999
Q ss_pred eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 52 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 52 TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
|++++- ++|.. +..+.|..+.+.|.++|++.+.
T Consensus 123 ~~~lid----~~G~i--------~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 123 SIILAD----RKGRI--------RQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp EEEEEC----TTSBE--------EEEEESCCCHHHHHHHHHHHHT
T ss_pred eEEEEC----CCCcE--------EEEecCcCCHHHHHHHHHHHHh
Confidence 999873 23321 2345578889999999988775
No 149
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.02 E-value=0.035 Score=52.24 Aligned_cols=74 Identities=14% Similarity=0.154 Sum_probs=55.2
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCccccccccc-CCCC
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL-EDWQ 82 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y-~g~R 82 (437)
..++|.++|..+.+ .+.|+.+. +.+++.+|+|.+ |+|.+|+|+...+-- + +....| +|..
T Consensus 39 ~~~~f~~~A~~lr~-------~~~F~~~~-----~~~v~~~~~~~~-p~i~~fk~~~~~~kf-~-----e~~~~y~~g~~ 99 (252)
T 2h8l_A 39 AHSEFLKAASNLRD-------NYRFAHTN-----VESLVNEYDDNG-EGIILFRPSHLTNKF-E-----DKTVAYTEQKM 99 (252)
T ss_dssp HHHHHHHHHHHTTT-------TSCEEEEC-----CHHHHHHHCSSS-EEEEEECCGGGCCTT-S-----CSEEECCCSSC
T ss_pred HHHHHHHHHHhccc-------CcEEEEEC-----hHHHHHHhCCCC-CcEEEEcchhhcccc-c-----ccccccCCCCc
Confidence 46789999999976 47888773 367999999998 999999775321100 0 123468 8989
Q ss_pred CHHHHHHHHHHhcc
Q 013733 83 TADGLLTWINKQTS 96 (437)
Q Consensus 83 tae~Iv~~i~k~l~ 96 (437)
+.+.|.+||....-
T Consensus 100 ~~~~l~~fi~~~~~ 113 (252)
T 2h8l_A 100 TSGKIKKFIQENIF 113 (252)
T ss_dssp CHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHhccc
Confidence 99999999998764
No 150
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=94.79 E-value=0.044 Score=46.67 Aligned_cols=74 Identities=15% Similarity=0.013 Sum_probs=54.2
Q ss_pred hhHHHHHHHHhCCCCCCCCcceEEEEEeccc--------------------------ccCc-----chhccCccccccee
Q 013733 5 KPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KINT-----NLCDKFSVGHYPML 53 (437)
Q Consensus 5 aP~fekaA~~l~~~~~~~~~~V~~akVDCa~--------------------------e~N~-----~lC~~f~V~gYPTL 53 (437)
.|.++++++.+++. .|.|..|++.- ..+. .+++.|+|.++||+
T Consensus 48 ~~~l~~l~~~~~~~------~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~ 121 (158)
T 3eyt_A 48 IPLAQKVRAAFPED------KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSL 121 (158)
T ss_dssp HHHHHHHHHHSCTT------TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEE
T ss_pred hHHHHHHHHHhCcC------CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEE
Confidence 79999999999864 38888888631 1112 58999999999999
Q ss_pred eEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 54 LWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 54 klf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+++- ++|.. +..+.|..+.+.|.++|++.+.
T Consensus 122 ~lid----~~G~i--------~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 122 LLID----KAGDL--------RAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp EEEC----TTSEE--------EEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEC----CCCCE--------EEEEeCCCCHHHHHHHHHHHhc
Confidence 8872 23321 2345578889999999988775
No 151
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=94.56 E-value=0.043 Score=46.70 Aligned_cols=73 Identities=12% Similarity=0.171 Sum_probs=51.3
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc-----------------------CcchhccCcccccceeeEcCCC
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTNLCDKFSVGHYPMLLWGSPS 59 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~-----------------------N~~lC~~f~V~gYPTLklf~p~ 59 (437)
.+.|.++++++.+.+. .+.|..|+++... +..+++.|+|.++||++++-
T Consensus 46 ~~~~~l~~l~~~~~~~------~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid-- 117 (152)
T 2lrn_A 46 KETPYLLKTYNAFKDK------GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVD-- 117 (152)
T ss_dssp HHHHHHHHHHHHHTTT------TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEEC--
T ss_pred HHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEEC--
Confidence 4679999999999864 3888899988521 37899999999999999872
Q ss_pred cccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 60 KFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 60 ~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
.+|.. +..+ .+.+.|.++|++.+.
T Consensus 118 --~~G~i--------~~~~---~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 118 --PEGKI--------VAKE---LRGDDLYNTVEKFVN 141 (152)
T ss_dssp --TTSEE--------EEEC---CCTTHHHHHHHHHHT
T ss_pred --CCCeE--------EEee---CCHHHHHHHHHHHHh
Confidence 22321 1111 234677777776654
No 152
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=94.44 E-value=0.039 Score=55.05 Aligned_cols=68 Identities=9% Similarity=0.123 Sum_probs=53.0
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC-C
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW-Q 82 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~-R 82 (437)
..++|+++|..+.+ .+.|+.+++ ..++.+|+|.+ |||++|+++. + ....|.|. +
T Consensus 159 ~~~~f~~~A~~~~~-------~~~F~~~~~-----~~~~~~~~v~~-p~i~lf~~~~---~---------~~~~y~g~~~ 213 (367)
T 3us3_A 159 HYKAFKEAAEEFHP-------YIPFFATFD-----SKVAKKLTLKL-NEIDFYEAFM---E---------EPVTIPDKPN 213 (367)
T ss_dssp HHHHHHHHHHHHTT-------TSCEEEECC-----HHHHHHHTCCT-TCEEEECTTC---S---------SCEECSSSSC
T ss_pred HHHHHHHHHHhhcC-------CcEEEEECC-----HHHHHHcCCCC-CeEEEEcCCC---C---------CCeecCCCCC
Confidence 46789999999976 488888763 47899999996 9999996531 1 12467884 9
Q ss_pred CHHHHHHHHHHhcc
Q 013733 83 TADGLLTWINKQTS 96 (437)
Q Consensus 83 tae~Iv~~i~k~l~ 96 (437)
+.+.|.+||.....
T Consensus 214 ~~~~l~~fi~~~~~ 227 (367)
T 3us3_A 214 SEEEIVNFVEEHRR 227 (367)
T ss_dssp CHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHcCc
Confidence 99999999988753
No 153
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=94.24 E-value=0.051 Score=46.64 Aligned_cols=76 Identities=8% Similarity=0.166 Sum_probs=53.0
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc-----------------ccCcchhccCcccccceeeEcCCCcccCCC
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------KINTNLCDKFSVGHYPMLLWGSPSKFVAGS 65 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~-----------------e~N~~lC~~f~V~gYPTLklf~p~~~~~G~ 65 (437)
.+.|.++++++.+.+. .+.+..|++.. ..+..+++.|+|.++||++++- .+|.
T Consensus 58 ~~~~~l~~~~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid----~~G~ 127 (158)
T 3hdc_A 58 DEMPSMDRLVKSFPKG------DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVD----RKGI 127 (158)
T ss_dssp HHHHHHHHHHHHSSTT------SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEEEC----TTSB
T ss_pred HHHHHHHHHHHHcccC------CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEEEc----CCCC
Confidence 4678999999999853 48888999876 1247899999999999988873 2332
Q ss_pred CCCCcccccccccCCC--CCHHHHHHHHHHhcc
Q 013733 66 WEPNQEKKEIRALEDW--QTADGLLTWINKQTS 96 (437)
Q Consensus 66 ~~~~~~~~~i~~y~g~--Rtae~Iv~~i~k~l~ 96 (437)
. +..+.|. .+.+++++.+++..+
T Consensus 128 i--------~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 128 I--------RQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp E--------EEEEESCCCTTSHHHHHHHHTTC-
T ss_pred E--------EEEEeCCCccchHHHHHHHHhhcc
Confidence 1 1223333 566778887776654
No 154
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.18 E-value=0.041 Score=48.72 Aligned_cols=76 Identities=13% Similarity=0.209 Sum_probs=53.2
Q ss_pred HHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHH
Q 013733 9 EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLL 88 (437)
Q Consensus 9 ekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv 88 (437)
.+|++.++. ..++.+||....++..+.++|+|.+|||+.++-+. .|. .+..+.| .++++++
T Consensus 68 ~~V~~~l~~-------~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~---~G~--------~l~~~~g-~~~~~fl 128 (153)
T 2dlx_A 68 EAVKNIIRE-------HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPR---TGQ--------KLVEWHQ-LDVSSFL 128 (153)
T ss_dssp HHHHHHHHH-------TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTT---TCC--------CCEEESS-CCHHHHH
T ss_pred HHHHHHHHc-------CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCC---CCc--------EeeecCC-CCHHHHH
Confidence 345666654 37777899876656789999999999999998432 132 1233445 8999999
Q ss_pred HHHHHhcccCCCCCC
Q 013733 89 TWINKQTSRSYGLDD 103 (437)
Q Consensus 89 ~~i~k~l~~~~~l~~ 103 (437)
+++++.+.....+++
T Consensus 129 ~~L~~~l~~~~~~~~ 143 (153)
T 2dlx_A 129 DQVTGFLGEHGQLDG 143 (153)
T ss_dssp HHHHHHHHHTCSCSS
T ss_pred HHHHHHHHhcCCCCC
Confidence 999888765444443
No 155
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=94.05 E-value=0.06 Score=50.70 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=54.6
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccC--C
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE--D 80 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~--g 80 (437)
...++|.++|..+.+ .+.|+.+. +.+++.+|+|.+ |+|.+|+|+...+.. + +....|+ |
T Consensus 39 ~~~~~F~~~A~~lr~-------~~~F~~t~-----~~~v~~~~~v~~-p~ivlfk~~~~~~kf-d-----e~~~~y~g~~ 99 (250)
T 3ec3_A 39 PGYLQYQDAANTLRE-------DYKFHHTF-----STEIAKFLKVSL-GKLVLMQPEKFQSKY-E-----PRMHVMDVQG 99 (250)
T ss_dssp HHHHHHHHHHHHHTT-------TCCEEEEC-----CHHHHHHHTCCS-SEEEEECCGGGCCTT-S-----CSCEEEECCT
T ss_pred hHHHHHHHHHHhhhc-------CcEEEEEC-----cHHHHHHcCCCC-CeEEEEecchhhccc-c-----ccceeccCCC
Confidence 356899999999976 47888764 367899999998 999999775332100 0 1123577 4
Q ss_pred CCCHHHHHHHHHHhcc
Q 013733 81 WQTADGLLTWINKQTS 96 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l~ 96 (437)
.++.+.|.+||....-
T Consensus 100 ~~~~~~l~~fi~~~~~ 115 (250)
T 3ec3_A 100 STEASAIKDYVVKHAL 115 (250)
T ss_dssp TSCHHHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHcCC
Confidence 7899999999998753
No 156
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=93.76 E-value=0.045 Score=45.75 Aligned_cols=62 Identities=6% Similarity=0.062 Sum_probs=45.5
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCC
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ 82 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~R 82 (437)
.++|..+++|+.+. |.+.+||.+.+ +++..+|+|+ .|||.+|. +|. ....|..
T Consensus 45 ~a~~~L~~l~~e~~---------i~~~~vDId~d--~~l~~~ygv~-VP~l~~~~-----dG~----------~v~~g~~ 97 (107)
T 2fgx_A 45 EMIASLRVLQKKSW---------FELEVINIDGN--EHLTRLYNDR-VPVLFAVN-----EDK----------ELCHYFL 97 (107)
T ss_dssp HHHHHHHHHHHHSC---------CCCEEEETTTC--HHHHHHSTTS-CSEEEETT-----TTE----------EEECSSC
T ss_pred HHHHHHHHHHHhcC---------CeEEEEECCCC--HHHHHHhCCC-CceEEEEE-----CCE----------EEEecCC
Confidence 46788888887642 67888998865 8999999998 99998873 332 1124667
Q ss_pred CHHHHHHHH
Q 013733 83 TADGLLTWI 91 (437)
Q Consensus 83 tae~Iv~~i 91 (437)
+.+.|.+||
T Consensus 98 ~~~~L~~~L 106 (107)
T 2fgx_A 98 DSDVIGAYL 106 (107)
T ss_dssp CCHHHHHHH
T ss_pred CHHHHHHHh
Confidence 778888776
No 157
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=93.52 E-value=0.066 Score=45.23 Aligned_cols=76 Identities=11% Similarity=0.111 Sum_probs=51.4
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccc---------------------cCcchhccCcccccceeeEcCCCcc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---------------------INTNLCDKFSVGHYPMLLWGSPSKF 61 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e---------------------~N~~lC~~f~V~gYPTLklf~p~~~ 61 (437)
.+.|.++++++.+.+. .+.|..|++..+ .+..+++.|+|.++|+++++-
T Consensus 45 ~~~~~l~~~~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid---- 114 (154)
T 3kcm_A 45 EEIPSMMRLNAAMAGK------PFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVID---- 114 (154)
T ss_dssp HHHHHHHHHHHHTTTS------SEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEEC----
T ss_pred HHHHHHHHHHHHhccC------CeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEEC----
Confidence 4678999999999764 388888887753 124589999999999877762
Q ss_pred cCCCCCCCcccccccccCCC--CCHHHHHHHHHHhcc
Q 013733 62 VAGSWEPNQEKKEIRALEDW--QTADGLLTWINKQTS 96 (437)
Q Consensus 62 ~~G~~~~~~~~~~i~~y~g~--Rtae~Iv~~i~k~l~ 96 (437)
++|.. +..+.|. .+.+.|.++|++...
T Consensus 115 ~~G~i--------~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 115 RHGVI--------LKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp TTSBE--------EEEEESCCCTTSHHHHHHHHTC--
T ss_pred CCCcE--------EEEEcCCCccccHHHHHHHHHHHH
Confidence 23321 1223444 366789998876543
No 158
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=93.15 E-value=0.037 Score=48.81 Aligned_cols=83 Identities=11% Similarity=0.047 Sum_probs=44.3
Q ss_pred CcchhHHHHHH---HHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCccccccccc
Q 013733 2 RNYKPQYEKVA---RLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL 78 (437)
Q Consensus 2 k~faP~fekaA---~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y 78 (437)
|.|+|++++.+ +.++. .+....|| .+ +.++..+++|.++||+.+|.+....-....+...+. .-+
T Consensus 60 k~m~p~~~~~~~~~~~~~~-------~fv~V~vD--~e-~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~--~~~ 127 (151)
T 3ph9_A 60 QALKKVFAQNEEIQEMAQN-------KFIMLNLM--HE-TTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNR--LYT 127 (151)
T ss_dssp HHHHHHHHHCHHHHHHHHH-------TCEEEEES--SC-CSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTS--TTC
T ss_pred HHHHHHHhcCHHHHHHhhc-------CeEEEEec--CC-chhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCc--ccc
Confidence 45788887643 22221 24444555 22 357789999999999999853211110000000000 000
Q ss_pred CCCCCHHHHHHHHHHhcc
Q 013733 79 EDWQTADGLLTWINKQTS 96 (437)
Q Consensus 79 ~g~Rtae~Iv~~i~k~l~ 96 (437)
-...+++.|++.+++.+.
T Consensus 128 ~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 128 YEPRDLPLLIENMKKALR 145 (151)
T ss_dssp CCGGGHHHHHHHHHHHHS
T ss_pred cchhhHHHHHHHHHHHHH
Confidence 123567888888887654
No 159
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=93.04 E-value=0.058 Score=45.54 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=40.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc----------------------CcchhccCcccccceeeEcC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------------------NTNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~----------------------N~~lC~~f~V~gYPTLklf~ 57 (437)
+.+.|.++++++.+++.. .+.|..|+++... +..++++|+|.++||++++-
T Consensus 44 ~~~~p~l~~l~~~~~~~~-----~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid 116 (146)
T 1o8x_A 44 RGFTPQLIEFYDKFHESK-----NFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVD 116 (146)
T ss_dssp HHHHHHHHHHHHHHTTTT-----TEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHHHHHhhhcC-----CeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEE
Confidence 356899999999998422 4888888887521 35799999999999999983
No 160
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=92.83 E-value=0.11 Score=46.06 Aligned_cols=84 Identities=5% Similarity=-0.030 Sum_probs=55.2
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc---------------------------ccCcchhccCcccccceeeE
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------------KINTNLCDKFSVGHYPMLLW 55 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~---------------------------e~N~~lC~~f~V~gYPTLkl 55 (437)
...|+++++++.+.+. .|.|..|+++. ..+..+++.|+|.++||+++
T Consensus 63 ~~~~~l~~l~~~~~~~------~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 136 (196)
T 2ywi_A 63 HVQHELVRLANDYMPK------GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYI 136 (196)
T ss_dssp HHHHHHHHHHHHHGGG------TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEE
T ss_pred HHHHHHHHHHHHHHhC------CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEE
Confidence 4678999999998763 38888899842 23468999999999999998
Q ss_pred cCCCcccCCCCCCCcccccccc-cCCCCCHHHHHHHHHHhcc
Q 013733 56 GSPSKFVAGSWEPNQEKKEIRA-LEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 56 f~p~~~~~G~~~~~~~~~~i~~-y~g~Rtae~Iv~~i~k~l~ 96 (437)
+- ++|............. +.|..+.+.|.+.|++.+.
T Consensus 137 id----~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 137 FD----RDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp EE----TTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred Ec----CCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 72 2232100000000000 3466788999999988764
No 161
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=92.78 E-value=0.082 Score=53.02 Aligned_cols=77 Identities=8% Similarity=-0.030 Sum_probs=57.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc-------------------------ccCcchhccCcccccceeeEc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------KINTNLCDKFSVGHYPMLLWG 56 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~-------------------------e~N~~lC~~f~V~gYPTLklf 56 (437)
+.+.|.++++++.+++. .+.|..|+|+. ..+..+++.|+|.++||++++
T Consensus 98 ~~~~p~L~~l~~~~~~~------~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~lI 171 (352)
T 2hyx_A 98 QRAIPHVVGWYQAYKDS------GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYLI 171 (352)
T ss_dssp HHHHHHHHHHHHHHGGG------TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESEEEEE
T ss_pred HHHHHHHHHHHHHhhcC------CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCEEEEE
Confidence 35689999999999763 38888998852 123679999999999999887
Q ss_pred CCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 57 SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 57 ~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
- ++|.. +..+.|..+.+.|.++|++.+.
T Consensus 172 D----~~G~I--------v~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 172 D----ATGTV--------RHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp C----TTSBE--------EEEEESBCCHHHHHHHHHHHHH
T ss_pred e----CCCeE--------EEEEcCCCCHHHHHHHHHHHHh
Confidence 2 23321 2335577889999999988764
No 162
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=92.75 E-value=0.095 Score=43.67 Aligned_cols=70 Identities=4% Similarity=0.110 Sum_probs=46.6
Q ss_pred cchhHHHH---HHHHhCCCCCCCCcceEEEEEecccccCcch------------------------hccCcccccceeeE
Q 013733 3 NYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKINTNL------------------------CDKFSVGHYPMLLW 55 (437)
Q Consensus 3 ~faP~fek---aA~~l~~~~~~~~~~V~~akVDCa~e~N~~l------------------------C~~f~V~gYPTLkl 55 (437)
...|.+.+ +++.+++. .+.|..|+.+.. .+. .+.|+|.++||+++
T Consensus 44 ~~~~~l~~~~~l~~~~~~~------~~~~v~v~~d~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~l 115 (142)
T 3ewl_A 44 KFEKLFAEIPAFVEMVENG------TLRVLAIYPDEN--REEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYL 115 (142)
T ss_dssp HHHHHHHTCHHHHHHHHHT------SEEEEEEECSSC--HHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEE
T ss_pred HHHHHHHHhHHHHHHhccC------CeEEEEEEecCC--HHHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEE
Confidence 34677777 77777653 388888887643 222 45899999999999
Q ss_pred cCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 56 GSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 56 f~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+- ++|. + . .+..+.+.|.++|++..
T Consensus 116 id----~~G~---------i-~-~~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 116 LD----GRKR---------V-I-LKDTSMEQLIDYLATQA 140 (142)
T ss_dssp EC----TTCB---------E-E-ECSCCHHHHHHHHHC--
T ss_pred EC----CCCC---------E-E-ecCCCHHHHHHHHHHHc
Confidence 72 2332 1 1 24578899999988764
No 163
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=92.73 E-value=0.092 Score=46.14 Aligned_cols=81 Identities=5% Similarity=-0.044 Sum_probs=53.3
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccC-------------------------cccccceeeEcC
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-------------------------SVGHYPMLLWGS 57 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f-------------------------~V~gYPTLklf~ 57 (437)
...|.++++++.+++.+-.....|.|..|++... +.+..++| +|.++|+++++-
T Consensus 76 ~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid 154 (183)
T 3lwa_A 76 SESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-SRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLD 154 (183)
T ss_dssp HHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-CHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-CHHHHHHHHHHcCCCccEEECCcchHHHHhccCCCCCCCeEEEEC
Confidence 4678999999988764200001348999998862 24555554 789999877762
Q ss_pred CCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 58 PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 58 p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
++|.. +..+.|..+.+.|.++|++.+.
T Consensus 155 ----~~G~i--------~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 155 ----KQHRP--------AAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp ----TTSCE--------EEEECSCCCHHHHHHHHHHHHH
T ss_pred ----CCCcE--------EEEEcCCCCHHHHHHHHHHHHh
Confidence 23331 2345677899999999987653
No 164
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=92.67 E-value=0.062 Score=45.14 Aligned_cols=50 Identities=16% Similarity=0.114 Sum_probs=39.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccc----------------------cCcchhccCcccccceeeEc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------INTNLCDKFSVGHYPMLLWG 56 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e----------------------~N~~lC~~f~V~gYPTLklf 56 (437)
+.+.|.++++++.+++.. .+.|..|+++.. .+..++++|+|.++||++++
T Consensus 44 ~~~~~~l~~l~~~~~~~~-----~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~li 115 (144)
T 1i5g_A 44 RAFTPQLIDFYKAHAEKK-----NFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGV 115 (144)
T ss_dssp HHHHHHHHHHHHHHTTTT-----TEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHHHHHHhccCC-----CEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEE
Confidence 356899999999998522 488888888752 13579999999999999998
No 165
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=92.66 E-value=0.055 Score=45.29 Aligned_cols=51 Identities=14% Similarity=0.157 Sum_probs=39.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc----------------------CcchhccCcccccceeeEcC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------------------NTNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~----------------------N~~lC~~f~V~gYPTLklf~ 57 (437)
+.+.|.++++++.+++.. .+.+..|+++.+. +..++++|+|.++||++++.
T Consensus 44 ~~~~~~l~~l~~~~~~~~-----~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid 116 (144)
T 1o73_A 44 RGFTPVLAEFYEKHHVAK-----NFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITIN 116 (144)
T ss_dssp HHHHHHHHHHHHHHTTTT-----TEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEE
T ss_pred HHHHHHHHHHHHHhccCC-----CEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEE
Confidence 356899999999998432 4778888877531 35799999999999999983
No 166
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=92.64 E-value=0.13 Score=44.14 Aligned_cols=71 Identities=11% Similarity=0.124 Sum_probs=51.4
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccc----------------cC----------------------cchhcc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------IN----------------------TNLCDK 44 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e----------------~N----------------------~~lC~~ 44 (437)
.+.|.++++++.+. + |.|..|++... .+ ..+++.
T Consensus 54 ~~~~~l~~l~~~~~--~------v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 125 (165)
T 3ha9_A 54 YMADLLDRLTEKYR--E------ISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMDDGSLVEK 125 (165)
T ss_dssp HHHHHHHHHHHHCT--T------EEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEECCSHHHHH
T ss_pred hhHHHHHHHHHHcC--C------cEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeChHHHHHH
Confidence 46789999999887 2 88888888720 11 378999
Q ss_pred CcccccceeeEcCCCcccCCCCCCCcccccccccCCCC-CHHHHHHHHHHhc
Q 013733 45 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ-TADGLLTWINKQT 95 (437)
Q Consensus 45 f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~R-tae~Iv~~i~k~l 95 (437)
|+|.++||++++- ++|. +.. .|.. +.+.|.++|++.+
T Consensus 126 ~~v~~~P~~~lid----~~G~---------i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 126 FNVRSIDYIVIMD----KSSN---------VLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp TTCCSSSEEEEEE----TTCC---------EEE-EEESCCHHHHHHHHHHC-
T ss_pred hCCCCceEEEEEc----CCCc---------EEE-eCCCCCHHHHHHHHHHHh
Confidence 9999999999972 2333 112 5667 8999999887754
No 167
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=92.24 E-value=0.072 Score=44.99 Aligned_cols=73 Identities=14% Similarity=0.087 Sum_probs=48.4
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc---------------------ccCcchhccCcccccceeeEcCCCcc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------KINTNLCDKFSVGHYPMLLWGSPSKF 61 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~---------------------e~N~~lC~~f~V~gYPTLklf~p~~~ 61 (437)
.+.|.++++++. + .+.+..|++.. ..+..+++.|+|.++||++++-
T Consensus 59 ~~~~~l~~l~~~----~-----~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~~id---- 125 (156)
T 1kng_A 59 DEAPLLTELGKD----K-----RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVG---- 125 (156)
T ss_dssp HHHHHHHHHTTC----T-----TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCEEEEEC----
T ss_pred HHHHHHHHHHhc----C-----CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCeEEEEc----
Confidence 456777776653 1 47777777532 2246899999999999776662
Q ss_pred cCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 62 VAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 62 ~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
.+|.. +..+.|..+.+.|.++|++.+.
T Consensus 126 ~~G~i--------~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 126 REGTI--------VYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp TTSBE--------EEEEESCCCHHHHHHTHHHHHH
T ss_pred CCCCE--------EEEEeCCCCHHHHHHHHHHHHH
Confidence 23321 2235677889999998877653
No 168
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=91.97 E-value=0.23 Score=41.92 Aligned_cols=72 Identities=13% Similarity=0.184 Sum_probs=50.5
Q ss_pred cchhHHHHHHHHh-CCCCCCCCcceEEEEEeccccc-----------------------CcchhccCcccccceeeEcCC
Q 013733 3 NYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI-----------------------NTNLCDKFSVGHYPMLLWGSP 58 (437)
Q Consensus 3 ~faP~fekaA~~l-~~~~~~~~~~V~~akVDCa~e~-----------------------N~~lC~~f~V~gYPTLklf~p 58 (437)
...|.+.++++.+ ++. .+.|..|+++... +..+++.|+|.++||++++-
T Consensus 52 ~~~~~l~~l~~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid- 124 (150)
T 3fw2_A 52 QSNSELREIYKKYKKNK------YIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLS- 124 (150)
T ss_dssp HHHHHHHHHHHHHTTCS------SEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEEC-
T ss_pred HHHHHHHHHHHHhccCC------CeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEEC-
Confidence 4679999999999 543 3888888887542 34899999999999999982
Q ss_pred CcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 59 SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 59 ~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
++|.. +..+ .+.+.|.+.|++.+
T Consensus 125 ---~~G~i--------~~~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 125 ---SDGKI--------LAKN---LRGEELKKKIENIV 147 (150)
T ss_dssp ---TTSBE--------EEES---CCHHHHHHHHHHHH
T ss_pred ---CCCEE--------EEcc---CCHHHHHHHHHHHH
Confidence 23321 1111 26777777776654
No 169
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=91.86 E-value=0.097 Score=45.73 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=40.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccC----------------------cchhccCcccccceeeEcC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN----------------------TNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N----------------------~~lC~~f~V~gYPTLklf~ 57 (437)
+.+.|.++++++.+++.. .+.|..|+++...+ ..+++.|+|.++||++++.
T Consensus 64 ~~~~p~l~~l~~~~~~~~-----~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid 136 (165)
T 3s9f_A 64 RGFTPQLVEFYEKHHDSK-----NFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLN 136 (165)
T ss_dssp HHHHHHHHHHHHHHTTTT-----TEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHHHHHhccCC-----CeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEe
Confidence 356899999999998632 47777787765422 6899999999999999983
No 170
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=91.67 E-value=0.28 Score=42.68 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=55.2
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccc--cceeeEcCCCcccCCCCCCCcccccccccCC
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGH--YPMLLWGSPSKFVAGSWEPNQEKKEIRALED 80 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~g--YPTLklf~p~~~~~G~~~~~~~~~~i~~y~g 80 (437)
.+++.|+++|+.+++ ++.++.||.+.+.+..+...||+.. .|+|.++... ..+. . ...-.+
T Consensus 49 ~~~~~~~~vAk~fkg-------ki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~--~~~~-------K-y~~~~~ 111 (147)
T 3bj5_A 49 GKLSNFKTAAESFKG-------KILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLE--EEMT-------K-YKPESE 111 (147)
T ss_dssp HHHHHHHHHHHTTTT-------TCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECS--SSCE-------E-ECCSCC
T ss_pred HHHHHHHHHHHHcCC-------ceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecc--cccc-------c-CCCCcc
Confidence 367899999999986 5999999985444567889999996 9999986310 0110 0 111125
Q ss_pred CCCHHHHHHHHHHhcc
Q 013733 81 WQTADGLLTWINKQTS 96 (437)
Q Consensus 81 ~Rtae~Iv~~i~k~l~ 96 (437)
.-+.+.|.+|+.+.+.
T Consensus 112 ~~t~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 112 ELTAERITEFCHRFLE 127 (147)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHc
Confidence 6789999999998864
No 171
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=91.63 E-value=0.25 Score=42.03 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=49.4
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCC---
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED--- 80 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g--- 80 (437)
..++|.++|+.+ + .+.|+.++ +.++..+|+|. -|+|.+|.+. . +....|+|
T Consensus 54 ~~~~F~~~A~~~-~-------d~~F~~t~-----~~~v~~~~~v~-~~~vvlfkkf-----d-------e~~~~~~g~~~ 107 (124)
T 2l4c_A 54 AVPILHSMVQKF-P-------GVSFGIST-----DSEVLTHYNIT-GNTICLFRLV-----D-------NEQLNLEDEDI 107 (124)
T ss_dssp HHHHHHHHHHHC-T-------TSEEEEEC-----CHHHHHHTTCC-SSCEEEEETT-----T-------TEEEEECHHHH
T ss_pred hHHHHHHHHHhC-C-------CceEEEEC-----hHHHHHHcCCC-CCeEEEEEcC-----C-------CCceeecCccc
Confidence 468999999998 4 38898776 26799999999 8999998422 1 11235665
Q ss_pred -CCCHHHHHHHHHHh
Q 013733 81 -WQTADGLLTWINKQ 94 (437)
Q Consensus 81 -~Rtae~Iv~~i~k~ 94 (437)
..+.+.|.+||...
T Consensus 108 ~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 108 ESIDATKLSRFIEIN 122 (124)
T ss_dssp TTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHh
Confidence 67999999999865
No 172
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=91.57 E-value=0.087 Score=47.05 Aligned_cols=46 Identities=11% Similarity=-0.055 Sum_probs=38.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCc---ccccceeeEcC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS---VGHYPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~---V~gYPTLklf~ 57 (437)
+.+.|.++++|+.+. .+.|..||.+.+ .++..+|. |+++||+.+|.
T Consensus 70 ~~~~P~l~~l~~~~~--------~v~~~~v~~d~~--~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 70 QINLAALDFAQRLQP--------NIELAIISKGRA--EDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp HHHHHHHHHHHHHCT--------TEEEEEECHHHH--HHHTTTTTTCSSCCSSEEEEEC
T ss_pred HHHHHHHHHHHHHCC--------CcEEEEEECCCC--HHHHHHHHHcCCCCcCeEEEEC
Confidence 457899999998653 388999997754 88999997 99999999984
No 173
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=91.48 E-value=0.082 Score=45.60 Aligned_cols=72 Identities=10% Similarity=-0.087 Sum_probs=47.1
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc---------------------cccCcchhccCcccccceeeEcCCCcc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCDKFSVGHYPMLLWGSPSKF 61 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa---------------------~e~N~~lC~~f~V~gYPTLklf~p~~~ 61 (437)
.+.|.++++++. + +.+..|++. ...+..++++|+|.++||.+++-
T Consensus 68 ~~~~~l~~l~~~--~--------v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid---- 133 (168)
T 2b1k_A 68 AEHQYLNQLSAQ--G--------IRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLID---- 133 (168)
T ss_dssp HHHHHHHHHHHT--T--------CCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEEEC----
T ss_pred HHHHHHHHHHHC--C--------CEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccCEEEEEC----
Confidence 467888888764 2 555666632 22347899999999999766552
Q ss_pred cCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 62 VAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 62 ~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
.+|.. +..+.|..+.+.|.++|++.+.
T Consensus 134 ~~G~i--------~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 134 GNGII--------RYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp TTSBE--------EEEEESCCCHHHHHHTTHHHHH
T ss_pred CCCeE--------EEEEeCCCCHHHHHHHHHHHHH
Confidence 23321 2234577888888888876653
No 174
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=91.40 E-value=0.067 Score=45.22 Aligned_cols=45 Identities=16% Similarity=0.059 Sum_probs=36.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcc----hhccCcccc-cceeeEcC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN----LCDKFSVGH-YPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~----lC~~f~V~g-YPTLklf~ 57 (437)
+.+.|+|++.++. + .+.+.+||-..+ ++ ++.+|+|++ -||+.+|.
T Consensus 40 ~~~~~~~e~~~~~--~-------~v~~~~vdVde~--r~~Sn~IA~~~~V~h~sPq~il~k 89 (112)
T 3iv4_A 40 ANAYDQFNKFLYE--R-------DMDGYYLIVQQE--RDLSDYIAKKTNVKHESPQAFYFV 89 (112)
T ss_dssp HHHHHHHHHHHHH--H-------TCCEEEEEGGGG--HHHHHHHHHHHTCCCCSSEEEEEE
T ss_pred HHHHHHHHHHhcc--C-------CceEEEEEeecC--chhhHHHHHHhCCccCCCeEEEEE
Confidence 4578999999973 2 488999997765 55 899999996 99999984
No 175
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=90.78 E-value=0.057 Score=48.86 Aligned_cols=47 Identities=21% Similarity=0.405 Sum_probs=37.1
Q ss_pred cchh-HH--HHHHHHhCCCCCCCCcceEEEEEecccccCcchhccC--------cccccceeeEcCC
Q 013733 3 NYKP-QY--EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF--------SVGHYPMLLWGSP 58 (437)
Q Consensus 3 ~faP-~f--ekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f--------~V~gYPTLklf~p 58 (437)
.|+| .| +++|+.+++ .+++.+||.+.+ +++...| +|.++||+.+|.|
T Consensus 56 ~m~~~~f~~~~va~~l~~-------~fv~ikVD~de~--~~l~~~y~~~~q~~~gv~g~Pt~v~l~~ 113 (173)
T 3ira_A 56 MMAHESFEDEEVAGLMNE-------AFVSIKVDREER--PDIDNIYMTVCQIILGRGGWPLNIIMTP 113 (173)
T ss_dssp HHHHHTTTCHHHHHHHHH-------HCEEEEEETTTC--HHHHHHHHHHHHHHHSCCCSSEEEEECT
T ss_pred cccccccCCHHHHHHHHh-------cCceeeeCCccc--CcHHHHHHHHHHHHcCCCCCcceeeECC
Confidence 4566 34 578888865 488899998865 8999888 9999999999843
No 176
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=90.30 E-value=0.51 Score=47.00 Aligned_cols=65 Identities=11% Similarity=0.122 Sum_probs=41.0
Q ss_pred hHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCC-CH
Q 013733 6 PQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ-TA 84 (437)
Q Consensus 6 P~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~R-ta 84 (437)
+.|+++|..+++ .+.++.+.+ +++.+++|.++| +++++.+.. .....|.|.+ +.
T Consensus 152 ~~f~~~A~~~~~-------~~~F~~~~~------~~~~~~~v~~~p-i~~~~~~~~-----------~~~~~y~g~~~~~ 206 (382)
T 2r2j_A 152 RVFERVANILHD-------DCAFLSAFG------DVSKPERYSGDN-IIYKPPGHS-----------APDMVYLGAMTNF 206 (382)
T ss_dssp HHHHHHHHHHTT-------TCEEEEEES------CC--------CE-EEEECSSSS-----------SCCEECCSCTTCH
T ss_pred HHHHHHHHHhhc-------cceEEEEeh------hhHHhhCCCCCc-eEECCCCCC-----------CcCcccCCCCCCH
Confidence 479999999986 367777775 256789999999 776543210 1124688888 99
Q ss_pred HHHHHHHHHhc
Q 013733 85 DGLLTWINKQT 95 (437)
Q Consensus 85 e~Iv~~i~k~l 95 (437)
++|.+||.+..
T Consensus 207 ~~l~~fi~~~~ 217 (382)
T 2r2j_A 207 DVTYNWIQDKC 217 (382)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999875
No 177
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=90.12 E-value=0.27 Score=41.95 Aligned_cols=71 Identities=6% Similarity=0.027 Sum_probs=49.0
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccC------------------c---chhccCcccccceeeEcCCCcc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN------------------T---NLCDKFSVGHYPMLLWGSPSKF 61 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N------------------~---~lC~~f~V~gYPTLklf~p~~~ 61 (437)
...|.++++++.+++. .+.|..|+++.... . .+.+.|+|.++||++++-
T Consensus 52 ~~~~~l~~l~~~~~~~------~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid---- 121 (152)
T 2lrt_A 52 AHNLALRELYNKYASQ------GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNLPSVFLVN---- 121 (152)
T ss_dssp HHHHHHHHHHHHHGGG------TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEE----
T ss_pred HHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccCceEEEEC----
Confidence 4578999999999864 38888899876421 0 288999999999999972
Q ss_pred cCCCCCCCcccccccccCCCCCHHHHHHHH
Q 013733 62 VAGSWEPNQEKKEIRALEDWQTADGLLTWI 91 (437)
Q Consensus 62 ~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i 91 (437)
++|.. +..+.|..+.+..+.-.
T Consensus 122 ~~G~i--------~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 122 RNNEL--------SARGENIKDLDEAIKKL 143 (152)
T ss_dssp TTTEE--------EEETTTCSCHHHHHHHH
T ss_pred CCCeE--------EEecCCHHHHHHHHHHH
Confidence 23321 23455777777665543
No 178
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=90.08 E-value=0.25 Score=34.88 Aligned_cols=29 Identities=31% Similarity=0.259 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHH-HHHhhhcC
Q 013733 403 VGAALAIALASCAFGALACYW-RSQQKNRK 431 (437)
Q Consensus 403 ~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~ 431 (437)
++++++|+++-.+-+.+++|+ |.+||+||
T Consensus 15 a~~vVGvll~vi~~l~~~~~~RRR~~~~kK 44 (44)
T 2jwa_A 15 ISAVVGILLVVVLGVVFGILIKRRQQKIRK 44 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhheehhhhhccC
Confidence 455666555555555556676 55555554
No 179
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=89.82 E-value=0.3 Score=40.78 Aligned_cols=69 Identities=6% Similarity=0.027 Sum_probs=46.0
Q ss_pred cchhHHHH---HHHHhCCCCCCCCcceEEEEEecccccC----------------------cchhccCcccccceeeEcC
Q 013733 3 NYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKIN----------------------TNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 3 ~faP~fek---aA~~l~~~~~~~~~~V~~akVDCa~e~N----------------------~~lC~~f~V~gYPTLklf~ 57 (437)
...|.+++ +.+.+++. .+.|..|+...+.. ..+.+.|+|.++||++++-
T Consensus 48 ~~~~~l~~~~~l~~~~~~~------~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid 121 (142)
T 3eur_A 48 EMIEGLKASPVINGFTAAK------KLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLD 121 (142)
T ss_dssp HHHHHHHHCHHHHHHHHTT------SEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEEC
T ss_pred HHHHHHhhhHHHHHHhccC------CeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEEC
Confidence 45788999 88888764 37777888765310 0158899999999999973
Q ss_pred CCcccCCCCCCCcccccccccCCCCCHHHHHHHHH
Q 013733 58 PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 92 (437)
Q Consensus 58 p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~ 92 (437)
++|.. .+. ..+.+.|.+|++
T Consensus 122 ----~~G~i----------~~~-~~~~~~l~~~l~ 141 (142)
T 3eur_A 122 ----KNKTV----------LLK-DATLQKVEQYLA 141 (142)
T ss_dssp ----TTCBE----------EEE-EECHHHHHHHHH
T ss_pred ----CCCcE----------Eec-CCCHHHHHHHHh
Confidence 23321 111 235778887775
No 180
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.60 E-value=0.31 Score=50.85 Aligned_cols=66 Identities=15% Similarity=0.034 Sum_probs=50.9
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW 81 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~ 81 (437)
+.++|.++++|..+. .|.+.+||.+.+ +++..+|+|++.||+.+ +|.. ...|.
T Consensus 133 ~~~~~~l~~~a~~~~--------~v~~~~vd~~~~--~~~~~~~~i~svPt~~i-------~g~~----------~~~G~ 185 (521)
T 1hyu_A 133 PDVVQALNLMAVLNP--------RIKHTAIDGGTF--QNEITERNVMGVPAVFV-------NGKE----------FGQGR 185 (521)
T ss_dssp HHHHHHHHHHHHHCT--------TEEEEEEETTTC--HHHHHHTTCCSSSEEEE-------TTEE----------EEESC
T ss_pred HHHHHHHHHHHhHcC--------ceEEEEEechhh--HHHHHHhCCCccCEEEE-------CCEE----------EecCC
Confidence 357899999988653 399999998765 99999999999999976 2321 12377
Q ss_pred CCHHHHHHHHHHh
Q 013733 82 QTADGLLTWINKQ 94 (437)
Q Consensus 82 Rtae~Iv~~i~k~ 94 (437)
.+.+.|.+|+.+.
T Consensus 186 ~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 186 MTLTEIVAKVDTG 198 (521)
T ss_dssp CCHHHHHHHHCCS
T ss_pred CCHHHHHHHHhhc
Confidence 8889999998553
No 181
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=89.16 E-value=0.74 Score=40.34 Aligned_cols=81 Identities=6% Similarity=-0.011 Sum_probs=54.1
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc---------------------------ccCcchhccCcccccceee
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------------KINTNLCDKFSVGHYPMLL 54 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~---------------------------e~N~~lC~~f~V~gYPTLk 54 (437)
+...|.++++++.+.+ .+.|..|++.. ..+..+++.|+|.++||++
T Consensus 49 ~~~~~~l~~l~~~~~~-------~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~ 121 (188)
T 2cvb_A 49 KGSIGELVALAERYRG-------KVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVF 121 (188)
T ss_dssp HTTHHHHHHHHHHTTT-------TEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEE
T ss_pred HHHHHHHHHHHHHhhc-------CeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEE
Confidence 3567999999998875 28888888842 2246799999999999999
Q ss_pred EcCCCcccCCCCCCCccccccc----ccCCCCCHHHHHHHHHHhccc
Q 013733 55 WGSPSKFVAGSWEPNQEKKEIR----ALEDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 55 lf~p~~~~~G~~~~~~~~~~i~----~y~g~Rtae~Iv~~i~k~l~~ 97 (437)
++-+ +|.... .+.. .+.|..+.+.|.+.|++.+..
T Consensus 122 lid~----~G~i~~----~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 122 LFDE----RRLLRY----HGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp EECT----TCBEEE----EECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred EECC----CCcEEE----EEecCCccccccccCHHHHHHHHHHHHcC
Confidence 8732 222100 0000 022445778899999887653
No 182
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=86.83 E-value=0.12 Score=42.82 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=38.3
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc-----------------------CcchhccCcccccceeeEcC
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~-----------------------N~~lC~~f~V~gYPTLklf~ 57 (437)
+.+.|.++++++.+++.. ..+.+..|+++... +..++++|+|.++||++++.
T Consensus 42 ~~~~~~l~~~~~~~~~~~----~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid 116 (143)
T 2lus_A 42 RGFTPILADMYSELVDDS----APFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVK 116 (143)
Confidence 467899999998885421 14777777776431 14799999999999999984
No 183
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=86.27 E-value=0.43 Score=41.88 Aligned_cols=47 Identities=9% Similarity=-0.113 Sum_probs=33.6
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+..+++.|+|.++|+++++- ++|.. +..+.|..+.+.|.++|.+.+.
T Consensus 121 ~~~~~~~~~v~~~P~~~lid----~~G~i--------~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 121 DGTLGLDLGVYGAPETYLID----KQGII--------RHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp TCHHHHHHTCCSSCEEEEEC----TTCBE--------EEEEESCCCHHHHHHHTHHHHH
T ss_pred cchHHHHcCCCCCCeEEEEC----CCCeE--------EEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999888762 23321 2234577888888888877654
No 184
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=85.62 E-value=0.75 Score=40.17 Aligned_cols=76 Identities=12% Similarity=0.176 Sum_probs=51.1
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc---CcchhccCccc-----------------------ccceeeEc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI---NTNLCDKFSVG-----------------------HYPMLLWG 56 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~---N~~lC~~f~V~-----------------------gYPTLklf 56 (437)
...|.++++++.+++. .+.|..|+++.+. ...+++++++. ++||++++
T Consensus 77 ~~~~~l~~l~~~~~~~------~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~li 150 (186)
T 1jfu_A 77 KEMPALDELQGKLSGP------NFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLV 150 (186)
T ss_dssp HHHHHHHHHHHHHCBT------TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEE
T ss_pred HHHHHHHHHHHHhccC------CcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEE
Confidence 4678999999999753 4888888887531 14567777774 88988887
Q ss_pred CCCcccCCCCCCCcccccccccCCCC--CHHHHHHHHHHhcc
Q 013733 57 SPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQTS 96 (437)
Q Consensus 57 ~p~~~~~G~~~~~~~~~~i~~y~g~R--tae~Iv~~i~k~l~ 96 (437)
- ++|.. +..+.|.. +.++|.++|++.+.
T Consensus 151 d----~~G~i--------~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 151 D----PQGCE--------IATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp C----TTSBE--------EEEEESCCCTTSHHHHHHHHHHHC
T ss_pred C----CCCCE--------EEEEecCCccCHHHHHHHHHHHhc
Confidence 2 22321 12344544 47889999988765
No 185
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=84.91 E-value=1.3 Score=40.36 Aligned_cols=84 Identities=7% Similarity=0.046 Sum_probs=54.2
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEeccc---------------------------ccCcchhccCcccccceee
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------------KINTNLCDKFSVGHYPMLL 54 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~---------------------------e~N~~lC~~f~V~gYPTLk 54 (437)
+...|.++++++.+++.+ |.|..|++.. ..+..+++.|+|.++|+++
T Consensus 75 ~~~~~~l~~l~~~~~~~~------v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~ 148 (218)
T 3u5r_E 75 VLIREALAKFAGDYAGQG------LAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFF 148 (218)
T ss_dssp HTTHHHHHHHHHHHTTTT------EEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEE
T ss_pred HHHHHHHHHHHHHHHhCC------cEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEE
Confidence 356899999999998743 8888899841 1247899999999999999
Q ss_pred EcCCCcccCCCCCCC--cccccccccCCCCCHHHHHHHHHHhcc
Q 013733 55 WGSPSKFVAGSWEPN--QEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 55 lf~p~~~~~G~~~~~--~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
++-+ +|..... -+... ....+..+.+.|.+.|++.+.
T Consensus 149 liD~----~G~i~~~g~~d~~~-~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 149 LYDR----ERRLVYHGQFDDAR-PGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp EECT----TCBEEEEECSSSCC-TTSCCCCCCHHHHHHHHHHHT
T ss_pred EECC----CCcEEEeccccccc-cccccccCHHHHHHHHHHHHc
Confidence 9832 2221000 00000 001234567888888888764
No 186
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=84.84 E-value=0.13 Score=39.23 Aligned_cols=45 Identities=9% Similarity=0.031 Sum_probs=30.0
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeE
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLW 55 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLkl 55 (437)
.++|.++++++.++ ..+.+..||... .+.++..+|+|++.||+.+
T Consensus 17 ~~~~~l~~~~~~~~-------~~~~~~~v~~~~-~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 17 SAEQAVANAIDPSK-------YTVEIVHLGTDK-ARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp HHHHHHHHHSCTTT-------EEEEEEETTTCS-STHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHHHhcC-------CeEEEEEecCCh-hhHHHHHHcCCCcCCEEEE
Confidence 45566666654332 146666666532 2478899999999999976
No 187
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=84.14 E-value=2.7 Score=40.49 Aligned_cols=72 Identities=13% Similarity=0.131 Sum_probs=50.0
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchh--ccCc-----c-------------cccceeeEcCCCcccC
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC--DKFS-----V-------------GHYPMLLWGSPSKFVA 63 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC--~~f~-----V-------------~gYPTLklf~p~~~~~ 63 (437)
..+.|+++|..|.+ .+.|+.|+-..- ..+. .+|+ | ..+|+|.+|++..
T Consensus 175 ~~~~f~~~A~~~~~-------~~~F~~v~~~~~--a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~--- 242 (298)
T 3ed3_A 175 ISPVYKSIALDWLG-------KFDFYSISNKKL--KQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADK--- 242 (298)
T ss_dssp CCHHHHHHHHHTBT-------TEEEEEEEGGGC--CCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTT---
T ss_pred chHHHHHHHHHhhc-------CcEEEEEcchHh--hhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCC---
Confidence 46899999999986 599999984422 2222 3333 4 6799999985321
Q ss_pred CCCCCCcccccccccCC-CCCHHHHHHHHHHhcc
Q 013733 64 GSWEPNQEKKEIRALED-WQTADGLLTWINKQTS 96 (437)
Q Consensus 64 G~~~~~~~~~~i~~y~g-~Rtae~Iv~~i~k~l~ 96 (437)
.....|+| ..+.+.|.+||.++..
T Consensus 243 ---------~~~~~y~g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 243 ---------DKFWEYEGNSINKNDISKFLRDTFS 267 (298)
T ss_dssp ---------TEEEECCCSSCCHHHHHHHHHHHHT
T ss_pred ---------CceEEeccccCCHHHHHHHHHhhcC
Confidence 12446775 5799999999997654
No 188
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=83.31 E-value=0.82 Score=36.20 Aligned_cols=48 Identities=17% Similarity=0.154 Sum_probs=36.0
Q ss_pred EEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 28 MTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 28 ~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+.+||.+.+ +++..+|+|+ .|||.+ . +|.. + .|..+.+.|.+|+.+.+
T Consensus 29 ~~~vdid~~--~~l~~~~g~~-vPtl~~-~-----~G~~--------v---~g~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 29 FFSVFIDDD--AALESAYGLR-VPVLRD-P-----MGRE--------L---DWPFDAPRLRAWLDAAP 76 (87)
T ss_dssp EEEEECTTC--HHHHHHHTTT-CSEEEC-T-----TCCE--------E---ESCCCHHHHHHHHHTCC
T ss_pred eEEEECCCC--HHHHHHhCCC-cCeEEE-E-----CCEE--------E---eCCCCHHHHHHHHHHHH
Confidence 578998865 8999999999 999986 2 2321 1 26678889999997655
No 189
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=82.63 E-value=2.8 Score=33.45 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=40.5
Q ss_pred ceEEEEEecccccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcccCC
Q 013733 25 IILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 99 (437)
Q Consensus 25 ~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~~~~ 99 (437)
.|.+..||.+..++.++..+|+ ++.|+++. +|.. + ..+..+.+.|.+++.+.+...+
T Consensus 43 ~i~~~~vdi~~~~~~el~~~~g-~~vP~l~~-------~g~~--------~--~~~g~~~~~l~~~l~~~~~~~~ 99 (100)
T 1wjk_A 43 RFILQEVDITLPENSTWYERYK-FDIPVFHL-------NGQF--------L--MMHRVNTSKLEKQLRKLSGPSS 99 (100)
T ss_dssp SSEEEEEETTSSTTHHHHHHSS-SSCSEEEE-------SSSE--------E--EESSCCHHHHHHHHHSSSCSSC
T ss_pred CCeEEEEECCCcchHHHHHHHC-CCCCEEEE-------CCEE--------E--EecCCCHHHHHHHHHHHHhhcc
Confidence 4899999988334589999999 99999743 3321 1 1245678899999987765443
No 190
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=81.85 E-value=0.62 Score=35.25 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=43.7
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc--CcchhccCc--ccccceeeEcCCCcccCCCCCCCccccccccc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS--VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL 78 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~--N~~lC~~f~--V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y 78 (437)
+++|.+++++....+ +.+..||...+. ..++..+++ |.++||+.+ +|. .+
T Consensus 16 ~~~~~l~~l~~~~~~--------i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~-------~g~-----------~i 69 (85)
T 1ego_A 16 RAKDLAEKLSNERDD--------FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV-------DQQ-----------HI 69 (85)
T ss_dssp HHHHHHHHHHHHHSS--------CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE-------TTE-----------EE
T ss_pred HHHHHHHHHHhcCCC--------ceEEEEecccChHHHHHHHHHhCCCCceeCeEEE-------CCE-----------EE
Confidence 467788888876542 788889987541 137898999 999999943 232 11
Q ss_pred CCCCCHHHHHHHHHHhc
Q 013733 79 EDWQTADGLLTWINKQT 95 (437)
Q Consensus 79 ~g~Rtae~Iv~~i~k~l 95 (437)
.| .++|.+++++.+
T Consensus 70 ~~---~~~l~~~~~~~~ 83 (85)
T 1ego_A 70 GG---YTDFAAWVKENL 83 (85)
T ss_dssp ES---SHHHHHHHHHHH
T ss_pred EC---HHHHHHHHHHhc
Confidence 12 368888887764
No 191
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=81.10 E-value=1.7 Score=36.60 Aligned_cols=80 Identities=6% Similarity=0.033 Sum_probs=52.1
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccC--------------------------cchhccCcccccc-----
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--------------------------TNLCDKFSVGHYP----- 51 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N--------------------------~~lC~~f~V~gYP----- 51 (437)
...|.++++++.+++.. .. ..+.+..|+++.+.+ ..+.+.|+|...|
T Consensus 41 ~~~~~l~~l~~~~~~~~-~~-~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~ 118 (164)
T 2ggt_A 41 EELEKMIQVVDEIDSIT-TL-PDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDE 118 (164)
T ss_dssp HHHHHHHHHHHHHHHSS-SS-CCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECT
T ss_pred HHHHHHHHHHHHHhhcc-CC-CcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCC
Confidence 35688889988886410 00 147788888765311 2488899999999
Q ss_pred ----------eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 52 ----------MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 52 ----------TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+++++- ++|.. +..+.|..+.+.|.+.|++.+.
T Consensus 119 ~~~~~~~~~~~~~lid----~~G~i--------~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 119 DEDYIVDHTIIMYLIG----PDGEF--------LDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp TSCEEEEECCEEEEEC----TTSCE--------EEEEETTCCHHHHHHHHHHHHG
T ss_pred CCCeeEeccceEEEEC----CCCeE--------EEEeCCCCCHHHHHHHHHHHHH
Confidence 666652 23331 2234577888999999887664
No 192
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=80.66 E-value=1.3 Score=36.78 Aligned_cols=48 Identities=15% Similarity=0.061 Sum_probs=36.2
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc------------------------CcchhccCcccccceeeEc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI------------------------NTNLCDKFSVGHYPMLLWG 56 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~------------------------N~~lC~~f~V~gYPTLklf 56 (437)
...|.++++++.+++. .+.|..|+.+.+. +..+.+.|+|.++||.+++
T Consensus 49 ~~~~~l~~l~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~li 120 (143)
T 4fo5_A 49 ARNVQLANEVNKFGPD------KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFLI 120 (143)
T ss_dssp HHHHHHHHHHTTSCTT------TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEE
T ss_pred HHHHHHHHHHHHhCcC------CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCCCCCcEEEE
Confidence 4578899998888754 3777788776421 1357789999999998887
No 193
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=80.38 E-value=2.4 Score=39.03 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=24.7
Q ss_pred ceEEEEEecccccCcchhccCcccccceeeEcC
Q 013733 25 IILMTRVDCALKINTNLCDKFSVGHYPMLLWGS 57 (437)
Q Consensus 25 ~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~ 57 (437)
.|.+..|+=. +.+++++|+|++|||+.+|.
T Consensus 184 ~i~v~~~~~~---~~~l~~~f~v~~~Pslvl~~ 213 (244)
T 3q6o_A 184 GVAVRRVLNT---EANVVRKFGVTDFPSCYLLF 213 (244)
T ss_dssp TEEEEEEETT---CHHHHHHHTCCCSSEEEEEE
T ss_pred ceEEEEEeCc---hHHHHHHcCCCCCCeEEEEe
Confidence 4888877733 37999999999999998884
No 194
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=78.80 E-value=2.1 Score=36.39 Aligned_cols=80 Identities=6% Similarity=0.011 Sum_probs=52.2
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc--------------------------CcchhccCcccccc-----
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--------------------------NTNLCDKFSVGHYP----- 51 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~--------------------------N~~lC~~f~V~gYP----- 51 (437)
...|.++++++.+++.. ....+.|..|+++.+. ...+++.|+|...|
T Consensus 44 ~~~~~l~~l~~~~~~~~--~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~ 121 (171)
T 2rli_A 44 DELEKLVQVVRQLEAEP--GLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDE 121 (171)
T ss_dssp HHHHHHHHHHHHHHHST--TSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCS
T ss_pred HHHHHHHHHHHHHhhcc--CCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCC
Confidence 45688999998885310 0014888888876421 12588899999888
Q ss_pred ----------eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 52 ----------MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 52 ----------TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+++++- ++|.. +..+.|..+.+.|.+.|++.+.
T Consensus 122 ~~~~~~~~~~~~~lid----~~G~i--------~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 122 DQDYIVDHSIAIYLLN----PDGLF--------TDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp SCCCCEECCCEEEEEC----TTSCE--------EEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCeEEeccceEEEEC----CCCeE--------EEEECCCCCHHHHHHHHHHHHH
Confidence 666652 23331 2235577889999999887664
No 195
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=78.46 E-value=1.4 Score=37.68 Aligned_cols=48 Identities=4% Similarity=0.027 Sum_probs=37.1
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccc-------------------cCcchhccCcccc----cceeeEc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-------------------INTNLCDKFSVGH----YPMLLWG 56 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e-------------------~N~~lC~~f~V~g----YPTLklf 56 (437)
...|.+.++++.+++.+ +.|..|+++.. .+..+.+.|+|.+ +|+++++
T Consensus 47 ~~~~~l~~~~~~~~~~~------v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~li 117 (161)
T 3drn_A 47 REASAFRDNWDLLKDYD------VVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVI 117 (161)
T ss_dssp HHHHHHHHTHHHHHTTC------EEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHcC------CEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEE
Confidence 35688999999987643 77777877521 2478999999999 9998887
No 196
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=77.78 E-value=1.9 Score=40.17 Aligned_cols=74 Identities=14% Similarity=0.224 Sum_probs=53.3
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcc----cccceeeEcCCCcccCCCCCCCcccccccccC
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV----GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE 79 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V----~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~ 79 (437)
+...+.++|+.+++.. ..+.++-||+... ..++..||+ ..+|.|.++.. .+.. . .++
T Consensus 151 ~~~~~~~vA~~~~~k~----~~~~F~~~d~~~~--~~~~~~fgl~~~~~~~P~v~i~~~----~~~k--------y-~~~ 211 (252)
T 2h8l_A 151 WRNRVMMVAKKFLDAG----HKLNFAVASRKTF--SHELSDFGLESTAGEIPVVAIRTA----KGEK--------F-VMQ 211 (252)
T ss_dssp HHHHHHHHHHHHHHTT----CCCEEEEEETTTT--HHHHGGGTCCCCSCSSCEEEEECT----TSCE--------E-ECC
T ss_pred HHHHHHHHHHHccccC----ceEEEEEEchHHH--HHHHHHcCCCCccCCCCEEEEEeC----cCcE--------e-cCC
Confidence 5667888999998632 2499999998865 779999999 36999998731 1110 1 134
Q ss_pred CCCCHHH--HHHHHHHhcc
Q 013733 80 DWQTADG--LLTWINKQTS 96 (437)
Q Consensus 80 g~Rtae~--Iv~~i~k~l~ 96 (437)
+..+.++ |.+|+++.+.
T Consensus 212 ~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 212 EEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp SCCCTTSHHHHHHHHHHHH
T ss_pred cccCcchHHHHHHHHHHHC
Confidence 5567777 9999988763
No 197
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=73.64 E-value=0.93 Score=38.67 Aligned_cols=76 Identities=8% Similarity=0.027 Sum_probs=48.0
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccccC--------------------------cchhccC-----------
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--------------------------TNLCDKF----------- 45 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N--------------------------~~lC~~f----------- 45 (437)
...|.++++++.+++.. ...+.|..|+++.+.+ ..+++.|
T Consensus 53 ~~~~~l~~~~~~~~~~~---~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~ 129 (172)
T 2k6v_A 53 TTLLALKRAYEKLPPKA---QERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRG 129 (172)
T ss_dssp HHHHHHHHHHTTSCHHH---HTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEE
T ss_pred HHHHHHHHHHHHhhhhc---cCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCC
Confidence 45688888888776420 0038888899875311 2454444
Q ss_pred ----cccccceeeEcCCCcccCCCCCCCcccccccccCCCC--CHHHHHHHHHHh
Q 013733 46 ----SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQ 94 (437)
Q Consensus 46 ----~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~R--tae~Iv~~i~k~ 94 (437)
+|.+.||++++- +|.. +..+.|.. +.+.|.+.|++.
T Consensus 130 ~~~~~i~~~P~~~lid-----~G~i--------~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 130 PGEYLVDHTATTFVVK-----EGRL--------VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp TTEEEEEECCCEEEEE-----TTEE--------EEEECHHHHTCHHHHHHHHHHC
T ss_pred CCCceEecCCEEEEEE-----CCEE--------EEEECCCCCCCHHHHHHHHHHh
Confidence 467899999972 3321 22345655 889999888764
No 198
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=75.72 E-value=0.69 Score=39.22 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=31.6
Q ss_pred CcchhHHHH-HHHHhCCCCCCCCcceEEEEEecccccCcchhccCc------------------------ccccceeeEc
Q 013733 2 RNYKPQYEK-VARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS------------------------VGHYPMLLWG 56 (437)
Q Consensus 2 k~faP~fek-aA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~------------------------V~gYPTLklf 56 (437)
+.+.|.+++ +++.++.. ..+.+..|+++.. .+.+.+|. +.++||++++
T Consensus 49 ~~~~~~l~~~l~~~~~~~-----~~~~vv~v~~d~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~P~~~li 121 (159)
T 2ls5_A 49 RKEMPFIEKDIWLKHKDN-----ADFALIGIDRDEP--LEKVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGITRNVLI 121 (159)
Confidence 456788887 77777621 1478888887754 34444443 6779998887
No 199
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=73.05 E-value=4.7 Score=34.59 Aligned_cols=25 Identities=8% Similarity=0.173 Sum_probs=19.3
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
..|.++++++.+++. .+.|..|+++
T Consensus 49 ~~~~l~~l~~~~~~~------~v~vv~vs~d 73 (171)
T 3cmi_A 49 QYKELEALYKRYKDE------GFTIIGFPCN 73 (171)
T ss_dssp HHHHHHHHHHHHGGG------TEEEEEEEEC
T ss_pred hHHHHHHHHHHhccC------CeEEEEEECc
Confidence 468899999998864 3788888773
No 200
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=72.63 E-value=1.3 Score=38.43 Aligned_cols=44 Identities=20% Similarity=0.316 Sum_probs=33.9
Q ss_pred ccCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 36 KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 36 e~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+.|.++++++||+|.||+.+. +|. .+.|..+.+.|.++|++...
T Consensus 96 ~~~~~la~~~gI~gtPt~vi~------nG~-----------~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 96 AETTSLGEQFGFNGTPTLVFP------NGR-----------TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp HHHHHHHHHTTCCSSCEEECT------TSC-----------EEESCCCTTHHHHHHHHTSC
T ss_pred HHHHHHHHHhCCCccCEEEEE------CCE-----------EeeCCCCHHHHHHHHHHHHH
Confidence 346899999999999999872 232 24577888999999987654
No 201
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=72.58 E-value=2.6 Score=36.95 Aligned_cols=76 Identities=9% Similarity=-0.057 Sum_probs=51.4
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccc-----------------------cCcchhccCccc------ccce
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-----------------------INTNLCDKFSVG------HYPM 52 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e-----------------------~N~~lC~~f~V~------gYPT 52 (437)
+...|.++++++.|.+. .+.|..|+.+.. .+..+++.|+|. ++||
T Consensus 48 ~~~~~~l~~~~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~ 121 (187)
T 1we0_A 48 PTELEDVQKEYAELKKL------GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRG 121 (187)
T ss_dssp THHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEE
T ss_pred HHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeE
Confidence 34678999999988753 277777877631 146789999999 9999
Q ss_pred eeEcCCCcccCCCCCCCcccccccccCC----CCCHHHHHHHHHHhc
Q 013733 53 LLWGSPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 95 (437)
Q Consensus 53 Lklf~p~~~~~G~~~~~~~~~~i~~y~g----~Rtae~Iv~~i~k~l 95 (437)
++++- ++|.. +..+.| .++.+.|++.|++..
T Consensus 122 ~~lid----~~G~i--------~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 122 TFIID----PDGVI--------QAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp EEEEC----TTSBE--------EEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred EEEEC----CCCeE--------EEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99982 22321 111112 257889999887655
No 202
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=72.14 E-value=3.3 Score=29.10 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=17.0
Q ss_pred eeHHHHHHHHHHHhhhhHHHHHHHHHhhhc
Q 013733 401 VPVGAALAIALASCAFGALACYWRSQQKNR 430 (437)
Q Consensus 401 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 430 (437)
+-.|...++++.....+++.+|||....++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 334444456666666667778875543333
No 203
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=70.49 E-value=3 Score=37.01 Aligned_cols=78 Identities=14% Similarity=0.088 Sum_probs=50.2
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccc--------------------------cCcchhccCccc------ccc
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNLCDKFSVG------HYP 51 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e--------------------------~N~~lC~~f~V~------gYP 51 (437)
..|.+.++++.|++. .+.|..|+++.. .+..+++.|+|. ++|
T Consensus 53 ~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P 126 (197)
T 1qmv_A 53 EIIAFSNRAEDFRKL------GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYR 126 (197)
T ss_dssp HHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECE
T ss_pred HHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceee
Confidence 468888998888764 377878887631 135789999999 899
Q ss_pred eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 52 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 52 TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+++++- ++|.... ..+......++.+++++.|++..
T Consensus 127 ~~~lid----~~G~i~~----~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 127 GLFIID----GKGVLRQ----ITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp EEEEEC----TTSBEEE----EEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEEEEC----CCCcEEE----EEeCCCCCCCCHHHHHHHHHhcc
Confidence 988873 2232100 00001112478899999987653
No 204
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=70.27 E-value=2.5 Score=37.51 Aligned_cols=76 Identities=12% Similarity=0.053 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecccc--------------------------cCcchhccCccc-----cc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNLCDKFSVG-----HY 50 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e--------------------------~N~~lC~~f~V~-----gY 50 (437)
+...|.++++++.+.+. .+.|..|+.+.. .+..+++.|+|. ++
T Consensus 50 ~~~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~ 123 (198)
T 1zof_A 50 PTEIIAFDKRVKDFHEK------GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIAL 123 (198)
T ss_dssp CTHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEEC
T ss_pred HHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCccc
Confidence 45678899998888753 377777876530 146789999999 99
Q ss_pred ceeeEcCCCcccCCCCCCCcccccccccCC----CCCHHHHHHHHHHhc
Q 013733 51 PMLLWGSPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 95 (437)
Q Consensus 51 PTLklf~p~~~~~G~~~~~~~~~~i~~y~g----~Rtae~Iv~~i~k~l 95 (437)
|+.+++- ++|.. +..+.| .++.++|++.|++..
T Consensus 124 P~~~lid----~~G~i--------~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 124 RGAFLID----KNMKV--------RHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp EEEEEEE----TTTEE--------EEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred ceEEEEC----CCCEE--------EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 9998872 23321 111212 247889999987654
No 205
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=70.22 E-value=2.6 Score=29.60 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHh
Q 013733 404 GAALAIALASCAFGALACYWRSQQ 427 (437)
Q Consensus 404 ~~~~~i~~~~~~~~~~~~~~~~~~ 427 (437)
|...++++.....+++.+|||..+
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eehHHHHHHHHHHHHHHHHhhhhh
Confidence 333446666666667777875433
No 206
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=69.97 E-value=2.8 Score=36.18 Aligned_cols=41 Identities=10% Similarity=0.204 Sum_probs=31.5
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+..+..++||+|.||+.+ +|. .+.|..+.+.|.++|++.+.
T Consensus 133 ~~~~a~~~gv~gtPt~~i-------~g~-----------~~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 133 SMALAQKLGFNGTPSFVV-------EDA-----------LVPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHHHHTCCSSSEEEE-------TTE-----------EECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCccCCEEEE-------CCE-----------EeeCCCCHHHHHHHHHHHHh
Confidence 456788999999999987 221 34688889999999887653
No 207
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=69.00 E-value=3.4 Score=36.52 Aligned_cols=76 Identities=12% Similarity=0.027 Sum_probs=51.6
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccc-----------------------cCcchhccCccc-----ccceee
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-----------------------INTNLCDKFSVG-----HYPMLL 54 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e-----------------------~N~~lC~~f~V~-----gYPTLk 54 (437)
...|.++++++.+.+. .+.|..|+.+.. .+..+++.|+|. ++|+++
T Consensus 63 ~~~~~l~~l~~~~~~~------~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~ 136 (195)
T 2bmx_A 63 TEIAAFSKLNDEFEDR------DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTF 136 (195)
T ss_dssp HHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEE
T ss_pred HHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEE
Confidence 4568889998888754 377777877531 146788999999 999999
Q ss_pred EcCCCcccCCCCCCCcccccccccCC----CCCHHHHHHHHHHhcc
Q 013733 55 WGSPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQTS 96 (437)
Q Consensus 55 lf~p~~~~~G~~~~~~~~~~i~~y~g----~Rtae~Iv~~i~k~l~ 96 (437)
++- ++|.. +..+.| .++.+.|++.|++...
T Consensus 137 lid----~~G~i--------~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 137 IVD----PNNEI--------QFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp EEC----TTSBE--------EEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred EEc----CCCeE--------EEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 873 23321 111112 3578999999987654
No 208
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=67.77 E-value=5.2 Score=33.62 Aligned_cols=48 Identities=6% Similarity=-0.110 Sum_probs=35.4
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccc---------------------cCcchhccCccc----ccc--eeeE
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---------------------INTNLCDKFSVG----HYP--MLLW 55 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e---------------------~N~~lC~~f~V~----gYP--TLkl 55 (437)
...|.+.++++.+++. .+.|..|+++.. .+..+.+.|+|. ++| +.++
T Consensus 54 ~~~~~l~~~~~~~~~~------~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~l 127 (160)
T 1xvw_A 54 GELDQLRDHLPEFEND------DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFV 127 (160)
T ss_dssp HHHHHHHHTGGGTSSS------SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEE
T ss_pred HHHHHHHHHHHHHHHC------CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEE
Confidence 3568888888888753 377778887531 147899999999 999 6666
Q ss_pred c
Q 013733 56 G 56 (437)
Q Consensus 56 f 56 (437)
+
T Consensus 128 i 128 (160)
T 1xvw_A 128 V 128 (160)
T ss_dssp E
T ss_pred E
Confidence 5
No 209
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=64.93 E-value=3.9 Score=34.52 Aligned_cols=26 Identities=4% Similarity=0.156 Sum_probs=20.6
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
...|.++++++.+++. .+.|..|+++
T Consensus 49 ~~~~~l~~l~~~~~~~------~~~vv~vs~d 74 (170)
T 2p5q_A 49 SNYAEMNQLYEKYKDQ------GLEILAFPCN 74 (170)
T ss_dssp HHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHHHHHHHHHHHhccC------CEEEEEEECC
Confidence 3578999999999764 3888889885
No 210
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=61.96 E-value=5.1 Score=35.21 Aligned_cols=76 Identities=4% Similarity=-0.070 Sum_probs=47.8
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccc----c-----cCcchh-c-----------------------------
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----K-----INTNLC-D----------------------------- 43 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~----e-----~N~~lC-~----------------------------- 43 (437)
...|.++++++.+++. .+.|..|+++. + .-.+.+ .
T Consensus 65 ~~~~~l~~l~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~ 138 (190)
T 2vup_A 65 GGYETATTLYNKYKSQ------GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKT 138 (190)
T ss_dssp HHHHHHHHHHHHHGGG------TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC------CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhh
Confidence 3578999999998864 38888888762 0 001122 1
Q ss_pred cCcccccc------eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 44 KFSVGHYP------MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 44 ~f~V~gYP------TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
.|+|.++| |.+++- ++|.. +..+.|..+.+.|.+.|++.+.
T Consensus 139 ~~~v~~~P~i~~~~~~~lid----~~G~i--------~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 139 KPGILKTKAIKWNFTSFLID----RDGVP--------VERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp SCCGGGCCSCCSTTCEEEEC----TTSCE--------EEEECTTCCHHHHHHHHHHHHH
T ss_pred cCCcCCCccccccceEEEEC----CCCcE--------EEEECCCCCHHHHHHHHHHHHh
Confidence 25788888 655552 23321 2335577788999999988764
No 211
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=61.69 E-value=8.8 Score=34.89 Aligned_cols=79 Identities=11% Similarity=0.098 Sum_probs=50.8
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccc--------------------------cCcchhccCccc------cc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNLCDKFSVG------HY 50 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e--------------------------~N~~lC~~f~V~------gY 50 (437)
...|.++++++.|++. .+.|..|+++.. .+..+.+.|+|. .+
T Consensus 74 ~~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~ 147 (220)
T 1zye_A 74 TEIIAFSDKASEFHDV------NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLAL 147 (220)
T ss_dssp HHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEEC
T ss_pred HHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCccc
Confidence 3468888988888653 277777877531 135789999999 99
Q ss_pred ceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 51 PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 51 PTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
|+++++-+ +|.... ..+......++.++|++.|++..
T Consensus 148 P~~~liD~----~G~I~~----~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 148 RGLFIIDP----NGVIKH----LSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp EEEEEECT----TSBEEE----EEEECTTCCCCHHHHHHHHHHHH
T ss_pred ceEEEECC----CCEEEE----EEecCCCCCCCHHHHHHHHHHhh
Confidence 99999832 232100 00111223478899999887654
No 212
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=60.45 E-value=5.5 Score=41.70 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=32.6
Q ss_pred HHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccccceeeEcCC
Q 013733 7 QYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSP 58 (437)
Q Consensus 7 ~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~gYPTLklf~p 58 (437)
...+++..|.... .|.|..|+-+ +..++++|+|++||||.+|.+
T Consensus 171 ~~~~~~ldl~~~~-----~v~v~~v~~~---~~~l~~kfgV~~~Pslvl~~~ 214 (519)
T 3t58_A 171 LGREVTLDLSQYH-----AVAVRRVLNT---ESDLVNKFGVTDFPSCYLLLR 214 (519)
T ss_dssp HHHHHHHHTTTCT-----TEEEEEEETT---CHHHHHHHTCCCSSEEEEEET
T ss_pred HHHHHHHHhhccC-----CeeEEEecCc---hHHHHHHcCCCCCCeEEEEeC
Confidence 4456666666432 5888877744 369999999999999999853
No 213
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=60.12 E-value=19 Score=31.30 Aligned_cols=27 Identities=0% Similarity=-0.032 Sum_probs=20.8
Q ss_pred CcchhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 2 RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 2 k~faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
+...|.++++++.+++.+ +.|..|+++
T Consensus 62 ~~~~p~l~~l~~~~~~~~------~~vi~is~d 88 (187)
T 3dwv_A 62 KGGYETATTLYNKYKSQG------FTVLAFPSN 88 (187)
T ss_dssp TTHHHHHHHHHHHHGGGT------CEEEEEEBC
T ss_pred HHHHHHHHHHHHHhhhCC------eEEEEEECc
Confidence 456799999999998643 777778775
No 214
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=57.86 E-value=4.7 Score=36.62 Aligned_cols=40 Identities=20% Similarity=0.284 Sum_probs=30.7
Q ss_pred cCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHH
Q 013733 37 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 93 (437)
Q Consensus 37 ~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k 93 (437)
.+.+++++++|+|.||+.+ . +|. .+.|..+.+.|.++|++
T Consensus 169 ~~~~l~~~~gV~gTPt~vi-~-----nG~-----------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 169 KHYELGIQFGVRGTPSIVT-S-----TGE-----------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp HHHHHHHHHTCCSSCEEEC-T-----TSC-----------CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCEEEE-e-----CCE-----------EecCCCCHHHHHHHHHh
Confidence 3478899999999999986 2 332 24577889999998865
No 215
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.24 E-value=14 Score=33.02 Aligned_cols=70 Identities=11% Similarity=0.132 Sum_probs=45.4
Q ss_pred HHHHHhCCCCCCCCcceEEEEEecccccCc-------------chhcc---CcccccceeeEcCCCcccCCCCCCCcccc
Q 013733 10 KVARLFNGPNAAHPGIILMTRVDCALKINT-------------NLCDK---FSVGHYPMLLWGSPSKFVAGSWEPNQEKK 73 (437)
Q Consensus 10 kaA~~l~~~~~~~~~~V~~akVDCa~e~N~-------------~lC~~---f~V~gYPTLklf~p~~~~~G~~~~~~~~~ 73 (437)
++.+.++. ...+-.+|-+..+|. .++.. +++++||++.+.-+. ++.. .
T Consensus 82 ~V~~~l~~-------nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~---~~~~------~ 145 (178)
T 2ec4_A 82 SIVSYLSQ-------NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGK---RSSN------E 145 (178)
T ss_dssp HHHHHHHH-------TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCC---SSCC------C
T ss_pred HHHHHHHc-------CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcC---CCce------E
Confidence 45566664 366778887765422 34544 899999999987432 1111 1
Q ss_pred cccccCCCCCHHHHHHHHHHhc
Q 013733 74 EIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 74 ~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
-+..+.|..+++++++-+.+-+
T Consensus 146 vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 146 VLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp EEEEECSCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHH
Confidence 2445679999999998875543
No 216
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=56.21 E-value=9.1 Score=33.51 Aligned_cols=79 Identities=13% Similarity=0.105 Sum_probs=49.0
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecccc--------------------------cCcchhccCccc-----ccc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNLCDKFSVG-----HYP 51 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e--------------------------~N~~lC~~f~V~-----gYP 51 (437)
...|.+.++++.|++. .+.|..|+++.. .+..+.+.|+|. .+|
T Consensus 49 ~~~~~l~~~~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P 122 (192)
T 2h01_A 49 SEIIALDKALDSFKER------NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALR 122 (192)
T ss_dssp HHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECC
T ss_pred HHHHHHHHHHHHHHHC------CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceee
Confidence 4568888888888653 266777776531 135788999999 899
Q ss_pred eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 52 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 52 TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+++++- ++|.... ..+......++.++|++.|++..
T Consensus 123 ~~~liD----~~G~i~~----~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 123 AFVLID----KQGVVQH----LLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp EEEEEC----TTSBEEE----EEEGGGSSGGGHHHHHHHHHHHH
T ss_pred EEEEEc----CCCEEEE----EEeCCCCCCCCHHHHHHHHHHHh
Confidence 999983 2232100 00000112367888988887643
No 217
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=56.00 E-value=4.1 Score=37.02 Aligned_cols=42 Identities=12% Similarity=0.272 Sum_probs=31.2
Q ss_pred cCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 37 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 37 ~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
.+.+++++++|++.||+.+ .+|. .+.|..+.+.|.++|++..
T Consensus 169 ~~~~l~~~~gV~gtPt~v~------~dG~-----------~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 169 DHYALGVQLGVSGTPAVVL------SNGT-----------LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp HHHHHHHHHTCCSSSEEEC------TTSC-----------EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCEEEE------cCCe-----------EecCCCCHHHHHHHHHHhh
Confidence 3478999999999999954 2332 2457788899999887654
No 218
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=55.25 E-value=7.9 Score=34.35 Aligned_cols=78 Identities=10% Similarity=0.016 Sum_probs=50.1
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccc--------------------------cCcchhccCccc------ccc
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNLCDKFSVG------HYP 51 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e--------------------------~N~~lC~~f~V~------gYP 51 (437)
..|.++++++.|++. .+.|..|+++.. .+..+++.|+|. ++|
T Consensus 55 ~~~~l~~l~~~~~~~------~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P 128 (202)
T 1uul_A 55 EICQFSDRVKEFSDI------GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYR 128 (202)
T ss_dssp HHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECE
T ss_pred HHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceee
Confidence 468888888888754 377778887531 135788999999 999
Q ss_pred eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 52 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 52 TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+++++- ++|.... ..+......++.++|++.|++..
T Consensus 129 ~~~lid----~~G~i~~----~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 129 GLFIID----PKQNLRQ----ITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp EEEEEC----TTSBEEE----EEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEEEEC----CCCEEEE----EEeCCCCCCCCHHHHHHHHHHhh
Confidence 998873 2232100 00011123478899999887654
No 219
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=54.84 E-value=10 Score=32.93 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=20.6
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
...|.++++++.+++. .+.|..|+|+
T Consensus 66 ~~~p~l~~l~~~~~~~------~v~vv~vs~d 91 (181)
T 2p31_A 66 QHYRALQQLQRDLGPH------HFNVLAFPCN 91 (181)
T ss_dssp HHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHHHHHHHHHHHhhcC------CEEEEEEECc
Confidence 3578999999999864 3888889885
No 220
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=49.17 E-value=7.9 Score=33.79 Aligned_cols=41 Identities=10% Similarity=0.181 Sum_probs=29.7
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+..++.+.||+|.||+.+ +|. .+.|..+.+.|.++|++.+.
T Consensus 138 ~~~~a~~~gv~GtPt~vv-------nG~-----------~~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI-------NGE-----------KVEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE-------TTE-----------ECSCTTCHHHHHHHHHC---
T ss_pred HHHHHHHcCCCCCCeEEE-------CCE-----------EcCCCCCHHHHHHHHHHHHH
Confidence 467889999999999987 231 24577889999998877653
No 221
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=47.15 E-value=17 Score=30.30 Aligned_cols=26 Identities=12% Similarity=0.175 Sum_probs=20.3
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
...|.++++++.+++. .+.|..|+++
T Consensus 48 ~~~~~l~~l~~~~~~~------~~~vv~v~~d 73 (169)
T 2v1m_A 48 KNYRQLQEMHTRLVGK------GLRILAFPCN 73 (169)
T ss_dssp HHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHHHHHHHHHHHhhcC------CeEEEEEECC
Confidence 3568999999998763 3888889885
No 222
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=46.73 E-value=3.4 Score=32.94 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=24.9
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEeccccc---CcchhccCccccccee
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI---NTNLCDKFSVGHYPML 53 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~---N~~lC~~f~V~gYPTL 53 (437)
.+.|.+++++. .+.+..||...+. ...++.+|+|.++||+
T Consensus 35 ~~~~~l~~~~~-----------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~ 77 (116)
T 2e7p_A 35 RVKQLLTQVGA-----------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV 77 (116)
T ss_dssp HHHHHHHHHTC-----------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHHHcCC-----------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE
Confidence 45666666532 2445555543210 0469999999999999
No 223
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=44.98 E-value=13 Score=32.16 Aligned_cols=26 Identities=8% Similarity=0.029 Sum_probs=20.3
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
...|.++++++.+++. .+.|..|+++
T Consensus 64 ~~~~~l~~l~~~~~~~------~v~vv~vs~d 89 (183)
T 2obi_A 64 VNYTQLVDLHARYAEC------GLRILAFPCN 89 (183)
T ss_dssp HHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcC------CeEEEEEECC
Confidence 3568999999999864 3888889875
No 224
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=44.65 E-value=10 Score=34.13 Aligned_cols=42 Identities=14% Similarity=0.298 Sum_probs=32.3
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhccc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 97 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~~ 97 (437)
+..+.+++||+|.||+.+ +|. .+.|..+.+.|.+.|++.+..
T Consensus 152 ~~~~a~~~gV~gtPtfvv-------nG~-----------~~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 152 DSDLNQKMNIQATPTIYV-------NDK-----------VIKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp HHHHHHHTTCCSSCEEEE-------TTE-----------ECSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEE-------CCE-----------EecCCCCHHHHHHHHHHHHHh
Confidence 357788999999999987 332 246778899999998876643
No 225
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=44.35 E-value=4.2 Score=27.51 Aligned_cols=19 Identities=21% Similarity=0.295 Sum_probs=11.5
Q ss_pred cccceeeeHHHHHHHHHHH
Q 013733 395 STNAVVVPVGAALAIALAS 413 (437)
Q Consensus 395 ~~~~~~~~~~~~~~i~~~~ 413 (437)
+.+.+.+.+++++++++..
T Consensus 9 ~~~~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 9 GSGNLAVIGGVAVGVVLLL 27 (41)
T ss_dssp CCSSTHHHHHHHHHHHHHH
T ss_pred CCceEEEEeehhHHHHHHH
Confidence 3444556677777777644
No 226
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=42.53 E-value=11 Score=32.12 Aligned_cols=43 Identities=7% Similarity=0.065 Sum_probs=28.8
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+..+.+++||+|.||+.+ +|.. +....+..+.+++++-|+.-+
T Consensus 139 ~~~~a~~~gv~gTPtfiI-------NGky--------~v~~~~~~s~e~~~~~i~~Ll 181 (184)
T 4dvc_A 139 FDKQFQDSGLTGVPAVVV-------NNRY--------LVQGQSAKSLDEYFDLVNYLL 181 (184)
T ss_dssp HHHHHHHHTCCSSSEEEE-------TTTE--------EECGGGCSSHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCcCCEEEE-------CCEE--------eeCCcCCCCHHHHHHHHHHHH
Confidence 367888999999999987 3321 111234567788887776544
No 227
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=40.44 E-value=17 Score=34.17 Aligned_cols=76 Identities=7% Similarity=0.006 Sum_probs=47.9
Q ss_pred hhHHHHHHHHhCCCCCCCCcceEEEEEecccc-------------------------cCcchhccCccc-------ccce
Q 013733 5 KPQYEKVARLFNGPNAAHPGIILMTRVDCALK-------------------------INTNLCDKFSVG-------HYPM 52 (437)
Q Consensus 5 aP~fekaA~~l~~~~~~~~~~V~~akVDCa~e-------------------------~N~~lC~~f~V~-------gYPT 52 (437)
.|.+.++++.|++.+ +.|..|+++.. .+..+++.|+|. ++|+
T Consensus 53 l~~l~~l~~ef~~~g------v~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~ 126 (249)
T 3a2v_A 53 FVSFARRYEDFQRLG------VDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRG 126 (249)
T ss_dssp HHHHHHTHHHHHHTT------EEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEE
T ss_pred HHHHHHHHHHHHhCC------cEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccce
Confidence 577888888887543 77777887531 135688899997 8999
Q ss_pred eeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHh
Q 013733 53 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 94 (437)
Q Consensus 53 Lklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~ 94 (437)
++++-+ +|.... ..+....-.|+.++|++.|+..
T Consensus 127 ~fIID~----dG~I~~----~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 127 VFIVDA----RGVIRT----MLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp EEEECT----TSBEEE----EEEECTTBCCCHHHHHHHHHHH
T ss_pred EEEECC----CCeEEE----EEecCCcccchhHHHHHHHHHH
Confidence 888732 222100 0000112247899999998764
No 228
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=40.05 E-value=12 Score=33.17 Aligned_cols=46 Identities=9% Similarity=0.193 Sum_probs=33.4
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+.....++||.|.||+.++. +|. .+..+.|..+.+.|.++|++.+.
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~~-----~G~--------~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVES-----GTD--------RYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEEE-----TTE--------EEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccceEEEEE-----CCE--------EEEeccCCCCHHHHHHHHHHHHH
Confidence 46778899999999998752 332 11235688889999999887653
No 229
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=38.35 E-value=18 Score=29.14 Aligned_cols=18 Identities=22% Similarity=0.554 Sum_probs=15.6
Q ss_pred CCHHHHHHHHHHHhCCCc
Q 013733 353 WDQDEVFKFLTNYYGNTL 370 (437)
Q Consensus 353 w~~~~Vl~fL~~~Y~~~~ 370 (437)
-+.++|..||+..||.--
T Consensus 57 ~Sd~eI~~~mv~RYGdfV 74 (90)
T 2kw0_A 57 KSKKEIVDYMVARYGNFV 74 (90)
T ss_dssp CCHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHhcCCeE
Confidence 567999999999999863
No 230
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=37.93 E-value=18 Score=28.70 Aligned_cols=17 Identities=18% Similarity=0.501 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHHHhCCC
Q 013733 353 WDQDEVFKFLTNYYGNT 369 (437)
Q Consensus 353 w~~~~Vl~fL~~~Y~~~ 369 (437)
-..++|..||+..||.-
T Consensus 60 ~sd~eI~~~~v~RYG~f 76 (84)
T 2hl7_A 60 KSDGEIVDYMVARYGDF 76 (84)
T ss_dssp CCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHhcCCe
Confidence 56799999999999985
No 231
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=35.41 E-value=39 Score=30.46 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=47.0
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccc--------------------------cCcchhccCccc------ccc
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNLCDKFSVG------HYP 51 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e--------------------------~N~~lC~~f~V~------gYP 51 (437)
..|.+.++++.|++.+ |.|..|+++.. .+..+.+.|+|. .+|
T Consensus 88 ~~p~l~~l~~~~~~~~------v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P 161 (222)
T 3ztl_A 88 EIIAFSDQVEEFNSRN------CQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFR 161 (222)
T ss_dssp HHHHHHHTHHHHHTTT------EEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCE
T ss_pred HHHHHHHHHHHHHHCC------CEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccc
Confidence 4578888888887543 77777777631 135678899999 899
Q ss_pred eeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHH
Q 013733 52 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 93 (437)
Q Consensus 52 TLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k 93 (437)
+.+++- ++|.... .........+..+++++.++.
T Consensus 162 ~~~lID----~~G~I~~----~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 162 GLFIID----PNGILRQ----ITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp EEEEEC----TTSEEEE----EEEECTTBCCCHHHHHHHHHH
T ss_pred eEEEEC----CCCeEEE----EEecCCCCCCCHHHHHHHHHH
Confidence 998873 2332100 000001123568888888864
No 232
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=35.09 E-value=11 Score=32.43 Aligned_cols=37 Identities=11% Similarity=0.176 Sum_probs=27.1
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHH
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 92 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~ 92 (437)
+..+++++||+|.||+.+ +|. .+.|..+.+.|.+.|+
T Consensus 138 ~~~~a~~~gv~gtPt~vv-------ng~-----------~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 138 VIAEANAAHIQFVPTIII-------GEY-----------IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHHHHHHTCCSSCEEEE-------TTE-----------EECTTCCHHHHHHHHT
T ss_pred HHHHHHHcCCCCcCeEEE-------CCE-----------EccCCCCHHHHHHHhc
Confidence 467889999999999765 231 2457778888877764
No 233
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=34.51 E-value=63 Score=29.60 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=47.6
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccccCcchhccCcccc--cc-eeeEcCCCcccCCCCCCCcccccccccC-
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGH--YP-MLLWGSPSKFVAGSWEPNQEKKEIRALE- 79 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e~N~~lC~~f~V~g--YP-TLklf~p~~~~~G~~~~~~~~~~i~~y~- 79 (437)
+...++++|+.++ . +.++-||+... ......||+.. +| .+.... ..+.+ . .+.
T Consensus 155 ~~~~~~~vAk~~k--k------i~F~~~d~~~~--~~~l~~fgl~~~~~~p~~~~~~----~~~~k------y---~~~~ 211 (250)
T 3ec3_A 155 WRNKVLEVAKDFP--E------YTFAIADEEDY--ATEVKDLGLSESGGDVNAAILD----ESGKK------F---AMEP 211 (250)
T ss_dssp HHHHHHHHHTTCT--T------SEEEEEETTTT--HHHHHHTTCSSCSCSCEEEEEC----TTSCE------E---ECCC
T ss_pred HHHHHHHHHHhhc--c------eeEEEEcHHHH--HHHHHHcCCCccCCCcEEEEEc----CCCce------e---cCCc
Confidence 5677888998777 2 88888998765 67788999974 55 555531 11110 1 112
Q ss_pred CCCCHHHHHHHHHHhcc
Q 013733 80 DWQTADGLLTWINKQTS 96 (437)
Q Consensus 80 g~Rtae~Iv~~i~k~l~ 96 (437)
+.-+.+.|.+|++..+.
T Consensus 212 ~~~t~~~i~~Fv~~~~~ 228 (250)
T 3ec3_A 212 EEFDSDALREFVMAFKK 228 (250)
T ss_dssp CSCCHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHC
Confidence 45789999999988764
No 234
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=33.76 E-value=37 Score=30.46 Aligned_cols=78 Identities=13% Similarity=0.119 Sum_probs=46.8
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecccc--------------------------cCcchhccCccc-----ccce
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNLCDKFSVG-----HYPM 52 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~e--------------------------~N~~lC~~f~V~-----gYPT 52 (437)
..|.+.++++.|++. .+.|..|+.+.. .+.++++.|+|. ..|+
T Consensus 71 ~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~ 144 (213)
T 2i81_A 71 EIIALDKALDAFHER------NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRA 144 (213)
T ss_dssp HHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEE
T ss_pred HHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccE
Confidence 457788888877643 266666665430 136788999999 8999
Q ss_pred eeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 53 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 53 Lklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
++++- ++|.... ..+......++.++|++.|++..
T Consensus 145 ~~lID----~~G~i~~----~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 145 FVLID----MNGIVQH----LLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp EEEEC----TTSBEEE----EEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEEC----CCCEEEE----EEecCCCCCCCHHHHHHHHHHHH
Confidence 88873 2332100 00001112467899999887643
No 235
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=33.04 E-value=18 Score=31.44 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=27.8
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+..++.++||+|.||+.+ +|. ..+.|..+.+.|.+.|++.+
T Consensus 139 ~~~~a~~~gv~gtPt~vi-------ng~----------~~~~g~~~~~~l~~~i~~~l 179 (195)
T 2znm_A 139 MQKLTEQYRIDSTPTVIV-------GGK----------YRVIFNNGFDGGVHTIKELV 179 (195)
T ss_dssp HHHHHHHTTCCSSSEEEE-------TTT----------EEECCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCeEEE-------CCE----------EEEcCCCCHHHHHHHHHHHH
Confidence 367788999999999765 232 01345567777777776554
No 236
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=32.83 E-value=9.1 Score=35.47 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=31.7
Q ss_pred cCcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 37 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 37 ~N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
.+..++++++|++.||+.+.. .+|. +..+.|..+.+.|.++|++...
T Consensus 187 ~~~~l~~~~gv~gtPt~vi~~----~~G~---------~~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 187 DNEKLMDDLGANVTPAIYYMS----KENT---------LQQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp HHHHHHHHHTCCSSCEEEEEE----TTTE---------EEEEESSCCHHHHHHHTTC---
T ss_pred HHHHHHHHcCCCCCCEEEEEC----CCCC---------EEEecCCCCHHHHHHHHHHHHH
Confidence 346788999999999998851 1121 1234588889999988876543
No 237
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=31.21 E-value=21 Score=32.37 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=30.9
Q ss_pred cchh-ccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 39 TNLC-DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 39 ~~lC-~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
.... +++||+|.||+.+ +|. .+.|..+.+.|.+.|++.+.
T Consensus 157 ~~~a~~~~GV~GtPtfvv-------ng~-----------~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 157 TDEAINQYNVSGTPSFMI-------DGI-----------LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHCCCSSSEEEE-------TTE-----------ECTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCccCCEEEE-------CCE-----------EEeCCCCHHHHHHHHHHHhh
Confidence 4566 8899999999987 231 35688899999999887654
No 238
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=30.90 E-value=16 Score=32.42 Aligned_cols=45 Identities=9% Similarity=-0.067 Sum_probs=32.5
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcccCCC
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYG 100 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~~~~~ 100 (437)
+.....+.||.|.||+.+ +|. .+.|....+.|.++|.+......+
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi-------~g~-----------~~~G~~~~~~l~~~l~~~~~~~~~ 200 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL-------GDE-----------MWWGNDRLFMLESAMGRLCRQNAD 200 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE-------TTE-----------EEESGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCcCCEEEE-------CCE-----------EEECCCCHHHHHHHHhcccccccc
Confidence 356778999999999887 221 356778888899888776544333
No 239
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=30.08 E-value=20 Score=31.92 Aligned_cols=46 Identities=17% Similarity=0.274 Sum_probs=31.6
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhcc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 96 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l~ 96 (437)
+.+.+.++||+|.||+.+.. +|. .+....|..+.+.+++.|++.+.
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~-----~~~--------~~~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQI-----NDA--------YFPIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEE-----TTE--------EEEECCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEEEE-----CCE--------EEEeeCCCCCHHHHHHHHHHHHh
Confidence 35677899999999999842 111 12223467788888888877654
No 240
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=27.88 E-value=25 Score=30.95 Aligned_cols=43 Identities=12% Similarity=0.153 Sum_probs=29.9
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+..+.+++||+|.||+.+ +|.. +....|..+.+.+.+-|+..+
T Consensus 141 ~~~~a~~~gv~GtPtfvv-------ng~~--------~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV-------NGKY--------NVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE-------TTTE--------EECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE-------CCEE--------EEecCCCCCHHHHHHHHHHHH
Confidence 467788999999999987 3321 112357778888887776654
No 241
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=27.59 E-value=25 Score=30.45 Aligned_cols=40 Identities=10% Similarity=0.077 Sum_probs=27.7
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+..++.++||+|.||+.+ +|.. ...|. +.+.|.+.|++.+
T Consensus 144 ~~~~a~~~gv~gtPt~vi-------ng~~----------~~~g~-~~~~l~~~i~~~~ 183 (193)
T 2rem_A 144 ARAYALKVRPVGTPTIVV-------NGRY----------MVTGH-DFEDTLRITDYLV 183 (193)
T ss_dssp HHHHHHHHCCSSSSEEEE-------TTTE----------EECCS-SHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEE-------CCEE----------EecCC-CHHHHHHHHHHHH
Confidence 357788999999999765 2321 12455 7888888877654
No 242
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=26.79 E-value=68 Score=26.70 Aligned_cols=28 Identities=4% Similarity=0.051 Sum_probs=19.9
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
...|++.++.+.+++.+ ..+.|..|+++
T Consensus 51 ~~~~~l~~l~~~~~~~~----~~~~vv~is~d 78 (174)
T 1xzo_A 51 PMTAHMTDLQKKLKAEN----IDVRIISFSVD 78 (174)
T ss_dssp SHHHHHHHHHHHHHHTT----CCCEEEEEESC
T ss_pred HHHHHHHHHHHHhhhcC----CcEEEEEEEeC
Confidence 45688888888887532 13778888875
No 243
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=25.92 E-value=25 Score=31.13 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=27.0
Q ss_pred cchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHH
Q 013733 39 TNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 91 (437)
Q Consensus 39 ~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i 91 (437)
.+..++.||+|.||+.+ +|.. +..+.|..+.+.+.++|
T Consensus 144 ~~~a~~~GV~gtPtf~i-------ng~~--------~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI-------NGLV--------QPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHHTCCSSSEEEE-------TTEE--------CTTCCTTSCHHHHHHHH
T ss_pred HHHHHHCCCCccCEEEE-------CCEE--------ccCCCCCCCHHHHHHHh
Confidence 45678899999999987 3321 22345778888888775
No 244
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=30.82 E-value=15 Score=20.37 Aligned_cols=13 Identities=46% Similarity=1.122 Sum_probs=10.7
Q ss_pred CCChHHHHHHHHH
Q 013733 268 FVCEECRQHFYQM 280 (437)
Q Consensus 268 f~C~~C~~hF~~~ 280 (437)
|.|++|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 7899999999653
No 245
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=24.81 E-value=31 Score=29.74 Aligned_cols=43 Identities=12% Similarity=0.159 Sum_probs=29.4
Q ss_pred CcchhccCcccccceeeEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHhc
Q 013733 38 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 95 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLklf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~l 95 (437)
+..++.++||+|.||+.+ +|.. .....|..+.+.+.+.|++.+
T Consensus 151 ~~~~a~~~gv~gtPt~~i-------ng~~--------~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV-------NGKY--------LIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE-------TTTE--------EECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE-------CCEE--------EeccCCCCCHHHHHHHHHHHH
Confidence 467788999999999866 2321 111126678888888887654
No 246
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=24.68 E-value=1.3e+02 Score=24.81 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=17.0
Q ss_pred cchhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 3 NYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 3 ~faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
...|.+.++++.+ . .+.+..|+.+
T Consensus 62 ~~~~~l~~l~~~~-~-------~~~vv~is~d 85 (167)
T 2jsy_A 62 AQTRRFNEEAAKL-G-------DVNVYTISAD 85 (167)
T ss_dssp HTHHHHHHHHHHH-S-------SCEEEEEECS
T ss_pred HHHHHHHHHHHHc-C-------CCEEEEEECC
Confidence 4578899999888 2 2666667665
No 247
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=24.51 E-value=59 Score=25.86 Aligned_cols=41 Identities=10% Similarity=0.012 Sum_probs=27.8
Q ss_pred HHHHHHhCCCCCCCCcceE---EEEEecccccC-----cchhccCcccccceeeE
Q 013733 9 EKVARLFNGPNAAHPGIIL---MTRVDCALKIN-----TNLCDKFSVGHYPMLLW 55 (437)
Q Consensus 9 ekaA~~l~~~~~~~~~~V~---~akVDCa~e~N-----~~lC~~f~V~gYPTLkl 55 (437)
.++...|...+ +. +..||.+.+.+ ..+...++++++|++++
T Consensus 33 ~~~~~~L~~~~------~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 33 RNALDILNKFS------FKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp HHHHHHHTTSC------BCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHcC------CCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 34555565533 44 77889876411 26888999999999854
No 248
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=24.04 E-value=39 Score=29.76 Aligned_cols=18 Identities=17% Similarity=0.407 Sum_probs=15.6
Q ss_pred CcchhccCcccccceeeE
Q 013733 38 NTNLCDKFSVGHYPMLLW 55 (437)
Q Consensus 38 N~~lC~~f~V~gYPTLkl 55 (437)
+..+.+++||+|.||+.+
T Consensus 143 ~~~~a~~~gv~gtPt~vv 160 (193)
T 3hz8_A 143 MQELTETFQIDGVPTVIV 160 (193)
T ss_dssp HHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHhCCCcCCEEEE
Confidence 367788999999999987
No 249
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=22.98 E-value=51 Score=28.36 Aligned_cols=43 Identities=9% Similarity=0.153 Sum_probs=28.8
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEeccc----c-----cCcchhccCccccccee
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----K-----INTNLCDKFSVGHYPML 53 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa~----e-----~N~~lC~~f~V~gYPTL 53 (437)
..|.++++++.+++. .+.|..|+++. + .-.+.++++++. ||.+
T Consensus 67 ~~~~l~~l~~~~~~~------~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~-~p~~ 118 (185)
T 2gs3_A 67 NYTQLVDLHARYAEC------GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVK-FDMF 118 (185)
T ss_dssp HHHHHHHHHHHHGGG------TEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCC-SEEB
T ss_pred HHHHHHHHHHHhhcC------CeEEEEEECcccCCCCCCCHHHHHHHHHHcCCC-Ceee
Confidence 468899999998764 38888898863 1 113456666665 6654
No 250
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=22.84 E-value=13 Score=32.18 Aligned_cols=17 Identities=24% Similarity=0.782 Sum_probs=15.0
Q ss_pred CCCCCCCCCChhhhccC
Q 013733 325 KIIWPPKQLCSSCYRSH 341 (437)
Q Consensus 325 k~q~P~~~~Cp~C~~~~ 341 (437)
+++|||...||.|...+
T Consensus 55 ~~~~PPr~~Cp~C~s~~ 71 (145)
T 3irb_A 55 RIFVPARSYCEHCFVKI 71 (145)
T ss_dssp CEEESCCSEETTTTEEC
T ss_pred cEEcCchhhCcCCCCCc
Confidence 59999999999999754
No 251
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=22.72 E-value=74 Score=28.37 Aligned_cols=25 Identities=12% Similarity=0.186 Sum_probs=20.1
Q ss_pred chhHHHHHHHHhCCCCCCCCcceEEEEEecc
Q 013733 4 YKPQYEKVARLFNGPNAAHPGIILMTRVDCA 34 (437)
Q Consensus 4 faP~fekaA~~l~~~~~~~~~~V~~akVDCa 34 (437)
..|.++++++.+++. .+.|..|+|.
T Consensus 65 e~p~l~~l~~~~~~~------g~~vv~v~~d 89 (208)
T 2f8a_A 65 DYTQMNELQRRLGPR------GLVVLGFPCN 89 (208)
T ss_dssp HHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHHHHHHHHHHccCC------CeEEEEEECC
Confidence 468999999999864 3888889986
No 252
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=21.49 E-value=46 Score=22.12 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=12.2
Q ss_pred eeeHHHHHHHHHHHhhhhHHHHHHHHH
Q 013733 400 VVPVGAALAIALASCAFGALACYWRSQ 426 (437)
Q Consensus 400 ~~~~~~~~~i~~~~~~~~~~~~~~~~~ 426 (437)
++-+|.+|-..+ .|.-.+|||-.
T Consensus 11 t~i~gl~vif~~----lg~tflywrgr 33 (40)
T 2l9u_A 11 TVIAGLVVIFMM----LGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----hCceeEEEccc
Confidence 334455554444 44455899753
No 253
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=21.40 E-value=51 Score=23.96 Aligned_cols=28 Identities=4% Similarity=0.107 Sum_probs=20.1
Q ss_pred eEEEEEecccccCcchhc---cCcccccceeeE
Q 013733 26 ILMTRVDCALKINTNLCD---KFSVGHYPMLLW 55 (437)
Q Consensus 26 V~~akVDCa~e~N~~lC~---~f~V~gYPTLkl 55 (437)
+.+..||...+ +++.. ++++.++||+..
T Consensus 26 i~~~~vdi~~~--~~~~~~~~~~g~~~vP~~~~ 56 (81)
T 1h75_A 26 FDFEMINVDRV--PEAAEALRAQGFRQLPVVIA 56 (81)
T ss_dssp CCCEEEETTTC--HHHHHHHHHTTCCSSCEEEE
T ss_pred CCeEEEECCCC--HHHHHHHHHhCCCccCEEEE
Confidence 66778898754 44433 589999999943
No 254
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=21.17 E-value=1.5e+02 Score=24.32 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=42.4
Q ss_pred hhHHHHHHHHhCCCCCCCCcceEEEEEecccc-------------------cCcchhccCcccc------------ccee
Q 013733 5 KPQYEKVARLFNGPNAAHPGIILMTRVDCALK-------------------INTNLCDKFSVGH------------YPML 53 (437)
Q Consensus 5 aP~fekaA~~l~~~~~~~~~~V~~akVDCa~e-------------------~N~~lC~~f~V~g------------YPTL 53 (437)
.|.+.++.+.|++.+ +.|..|.++.. .+..+.+.|+|.. .|+.
T Consensus 55 ~~~l~~~~~~~~~~~------~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~ 128 (163)
T 3gkn_A 55 GLDFNALLPEFDKAG------AKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERST 128 (163)
T ss_dssp HHHHHHHHHHHHHTT------CEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEE
T ss_pred HHHHHHHHHHHHHCC------CEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcceEE
Confidence 467777777776532 55555555411 2357888899887 8998
Q ss_pred eEcCCCcccCCCCCCCcccccccccCCCCCHHHHHHHHHHh
Q 013733 54 LWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 94 (437)
Q Consensus 54 klf~p~~~~~G~~~~~~~~~~i~~y~g~Rtae~Iv~~i~k~ 94 (437)
++.- ++|.... ...........++|++.+++.
T Consensus 129 ~lid----~~G~i~~-----~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 129 FLLS----PEGQVVQ-----AWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEC----TTSCEEE-----EECSCCSTTHHHHHHHHHHHH
T ss_pred EEEC----CCCeEEE-----EEcCCCcccCHHHHHHHHHHH
Confidence 8873 2332100 001112235567788877654
No 255
>3p0k_A Sulfhydryl oxidase; 4-helix bundle, 5-helix bundle, flavin adenine dinucleotide, oxidoreductase, viral protein; HET: FAD; 1.47A {Autographa californica nucleopolyhedro} PDB: 3qzy_A* 3ust_A*
Probab=20.47 E-value=38 Score=32.28 Aligned_cols=43 Identities=35% Similarity=0.743 Sum_probs=28.5
Q ss_pred HHHHHHHHhcccCC------CCC-HH---HHHHHHHHHHh-c--CCChHHHHHHHH
Q 013733 237 LWVLLHSLSVRIDD------GES-QF---TFTAVCDFIHN-F--FVCEECRQHFYQ 279 (437)
Q Consensus 237 lW~LfH~ltv~~~~------~~~-~~---~~~~i~~fv~~-F--f~C~~C~~hF~~ 279 (437)
.|=..|.|+.-..| .-+ .. .++.|+-.+.+ | ..|.-||+|++.
T Consensus 110 IWD~IHfL~li~DDmV~nR~k~~~d~v~~~l~n~K~lfYNiF~~L~C~mC~~HYl~ 165 (266)
T 3p0k_A 110 IWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMN 165 (266)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHCCCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHHHHHHHHHHHhhHhheeCChHHhHHHEe
Confidence 69999999986543 111 22 34455555555 3 599999999964
Done!