Query 013734
Match_columns 437
No_of_seqs 186 out of 340
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 06:51:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013734.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013734hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 3E-127 7E-132 948.8 18.5 383 47-430 20-402 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 6E-109 1E-113 842.3 26.4 359 51-414 2-361 (361)
3 PRK10162 acetyl esterase; Prov 94.6 0.13 2.7E-06 52.0 8.0 44 185-228 132-178 (318)
4 KOG1515 Arylacetamide deacetyl 94.2 0.22 4.7E-06 51.5 8.9 70 181-251 143-213 (336)
5 PF00326 Peptidase_S9: Prolyl 93.0 0.098 2.1E-06 48.8 3.6 39 185-223 45-83 (213)
6 PRK13604 luxD acyl transferase 91.2 1.1 2.4E-05 45.9 9.0 51 184-244 91-141 (307)
7 PF10340 DUF2424: Protein of u 90.6 2.3 4.9E-05 44.7 10.9 109 87-227 107-218 (374)
8 PF00135 COesterase: Carboxyle 90.5 1 2.2E-05 47.5 8.3 79 184-269 185-268 (535)
9 COG1506 DAP2 Dipeptidyl aminop 89.6 0.44 9.6E-06 52.7 4.9 109 185-308 454-562 (620)
10 PRK10566 esterase; Provisional 89.0 0.87 1.9E-05 43.0 5.9 35 187-221 90-124 (249)
11 PF07859 Abhydrolase_3: alpha/ 88.0 0.91 2E-05 41.9 5.2 43 186-228 50-95 (211)
12 PRK10115 protease 2; Provision 87.6 0.74 1.6E-05 51.8 5.0 36 185-220 505-540 (686)
13 PF01764 Lipase_3: Lipase (cla 86.7 2.4 5.3E-05 36.5 6.9 55 203-263 63-118 (140)
14 cd00312 Esterase_lipase Estera 82.5 1.8 3.9E-05 45.9 4.9 41 184-224 153-196 (493)
15 PF12695 Abhydrolase_5: Alpha/ 82.0 2 4.4E-05 36.5 4.2 40 183-223 41-80 (145)
16 TIGR01840 esterase_phb esteras 81.2 2.1 4.6E-05 40.1 4.4 37 186-222 77-113 (212)
17 COG0657 Aes Esterase/lipase [L 80.9 3.3 7.2E-05 41.1 5.9 41 188-228 133-176 (312)
18 PF10503 Esterase_phd: Esteras 80.0 7.6 0.00016 37.8 7.8 41 187-231 80-120 (220)
19 PRK05077 frsA fermentation/res 78.6 10 0.00022 39.9 9.0 35 187-221 248-282 (414)
20 PLN02408 phospholipase A1 74.5 10 0.00022 39.9 7.4 64 192-262 188-252 (365)
21 PF05677 DUF818: Chlamydia CHL 73.9 7.5 0.00016 40.6 6.1 53 188-243 198-254 (365)
22 cd00707 Pancreat_lipase_like P 73.5 8.7 0.00019 38.1 6.4 58 187-247 95-152 (275)
23 PF00756 Esterase: Putative es 71.5 4.7 0.0001 38.2 3.8 43 186-229 97-140 (251)
24 COG2939 Carboxypeptidase C (ca 70.2 53 0.0011 36.0 11.7 139 86-240 87-237 (498)
25 TIGR02821 fghA_ester_D S-formy 70.0 5.6 0.00012 39.0 4.2 24 202-225 136-159 (275)
26 PLN02802 triacylglycerol lipas 69.3 14 0.00031 40.3 7.3 52 204-261 330-381 (509)
27 cd00519 Lipase_3 Lipase (class 68.3 15 0.00033 34.8 6.6 39 203-242 127-165 (229)
28 PF02230 Abhydrolase_2: Phosph 68.0 11 0.00025 35.3 5.7 53 187-245 89-141 (216)
29 PRK10439 enterobactin/ferric e 67.0 7.4 0.00016 41.2 4.5 44 186-229 264-313 (411)
30 PF12242 Eno-Rase_NADH_b: NAD( 66.1 8.9 0.00019 31.7 3.8 45 185-234 20-66 (78)
31 cd07224 Pat_like Patatin-like 65.6 7 0.00015 38.0 3.7 32 191-223 17-48 (233)
32 COG1770 PtrB Protease II [Amin 65.6 6.2 0.00014 44.2 3.7 39 183-221 506-546 (682)
33 COG3509 LpqC Poly(3-hydroxybut 64.7 63 0.0014 33.3 10.4 34 188-221 128-161 (312)
34 cd07198 Patatin Patatin-like p 64.7 7.6 0.00016 35.5 3.6 31 190-223 15-45 (172)
35 cd00741 Lipase Lipase. Lipase 64.7 17 0.00037 32.2 5.8 43 186-229 9-53 (153)
36 PLN02454 triacylglycerol lipas 63.7 23 0.00051 37.8 7.4 66 190-262 214-282 (414)
37 KOG4627 Kynurenine formamidase 60.3 8.8 0.00019 37.8 3.3 35 191-226 124-158 (270)
38 KOG1209 1-Acyl dihydroxyaceton 59.7 24 0.00051 35.1 6.1 66 200-265 4-76 (289)
39 PF05728 UPF0227: Uncharacteri 59.5 19 0.00041 34.1 5.4 37 188-230 45-81 (187)
40 PHA02857 monoglyceride lipase; 58.6 51 0.0011 31.4 8.3 21 203-223 96-116 (276)
41 PF08840 BAAT_C: BAAT / Acyl-C 57.8 23 0.00049 33.8 5.7 55 187-245 5-59 (213)
42 cd07222 Pat_PNPLA4 Patatin-lik 57.7 11 0.00023 37.1 3.4 32 191-222 17-49 (246)
43 PF00975 Thioesterase: Thioest 57.7 36 0.00079 31.5 7.0 52 187-241 51-102 (229)
44 PLN02442 S-formylglutathione h 57.0 11 0.00023 37.4 3.4 22 202-223 141-162 (283)
45 PF03583 LIP: Secretory lipase 55.9 22 0.00048 35.7 5.5 48 199-247 66-115 (290)
46 cd07218 Pat_iPLA2 Calcium-inde 55.9 13 0.00029 36.5 3.8 31 191-222 18-48 (245)
47 PF07819 PGAP1: PGAP1-like pro 55.8 17 0.00036 35.2 4.4 34 187-220 65-101 (225)
48 cd07204 Pat_PNPLA_like Patatin 55.4 13 0.00028 36.4 3.7 32 191-222 17-49 (243)
49 PLN02298 hydrolase, alpha/beta 54.6 36 0.00079 33.8 6.8 36 186-221 116-151 (330)
50 TIGR03100 hydr1_PEP hydrolase, 53.5 23 0.0005 34.6 5.1 36 186-222 83-118 (274)
51 COG2272 PnbA Carboxylesterase 52.4 16 0.00035 39.8 4.0 37 183-219 156-195 (491)
52 PLN03037 lipase class 3 family 50.9 45 0.00097 36.8 7.1 55 202-262 316-370 (525)
53 TIGR03101 hydr2_PEP hydrolase, 49.7 36 0.00079 33.9 5.8 33 187-222 85-117 (266)
54 PF12697 Abhydrolase_6: Alpha/ 48.8 61 0.0013 28.3 6.7 37 204-244 66-102 (228)
55 PF12740 Chlorophyllase2: Chlo 48.3 21 0.00046 35.8 3.9 40 186-226 65-113 (259)
56 PRK11460 putative hydrolase; P 47.5 28 0.00061 33.4 4.5 34 188-221 87-120 (232)
57 PLN02209 serine carboxypeptida 47.4 3E+02 0.0066 29.5 12.7 131 97-239 66-206 (437)
58 KOG1516 Carboxylesterase and r 47.2 28 0.00061 37.5 4.9 36 187-222 175-213 (545)
59 PF01738 DLH: Dienelactone hyd 45.8 27 0.00058 32.6 4.0 38 185-222 79-116 (218)
60 TIGR03695 menH_SHCHC 2-succiny 45.5 44 0.00096 29.8 5.3 23 202-224 68-90 (251)
61 PLN02324 triacylglycerol lipas 44.9 69 0.0015 34.4 7.2 39 189-228 200-239 (415)
62 PLN00021 chlorophyllase 43.5 28 0.0006 35.5 4.0 39 188-226 102-148 (313)
63 cd07207 Pat_ExoU_VipD_like Exo 42.8 29 0.00063 31.9 3.7 31 189-222 15-45 (194)
64 PLN02310 triacylglycerol lipas 42.4 68 0.0015 34.3 6.7 40 203-243 208-247 (405)
65 COG4814 Uncharacterized protei 42.3 31 0.00067 34.9 3.9 56 185-244 119-176 (288)
66 PRK10673 acyl-CoA esterase; Pr 42.1 52 0.0011 30.6 5.4 36 203-242 80-115 (255)
67 PF06028 DUF915: Alpha/beta hy 41.8 66 0.0014 32.0 6.2 62 181-246 82-145 (255)
68 PRK10349 carboxylesterase BioH 41.8 61 0.0013 30.5 5.9 48 189-243 62-109 (256)
69 PLN02965 Probable pheophorbida 41.4 64 0.0014 30.6 6.0 38 200-241 68-105 (255)
70 PLN02211 methyl indole-3-aceta 41.3 71 0.0015 31.2 6.4 24 200-223 83-106 (273)
71 COG0412 Dienelactone hydrolase 41.3 37 0.0008 33.1 4.3 41 185-225 93-133 (236)
72 KOG2237 Predicted serine prote 41.1 24 0.00052 39.7 3.2 35 183-217 528-562 (712)
73 TIGR03056 bchO_mg_che_rel puta 40.9 68 0.0015 30.0 6.0 21 203-223 94-114 (278)
74 TIGR03230 lipo_lipase lipoprot 40.5 71 0.0015 34.5 6.6 55 187-246 102-158 (442)
75 PF08237 PE-PPE: PE-PPE domain 39.7 83 0.0018 30.7 6.5 55 183-241 31-88 (225)
76 cd07220 Pat_PNPLA2 Patatin-lik 38.2 35 0.00075 33.8 3.6 31 191-221 22-53 (249)
77 TIGR03712 acc_sec_asp2 accesso 38.0 21 0.00045 39.0 2.1 25 202-226 355-379 (511)
78 TIGR03611 RutD pyrimidine util 37.5 50 0.0011 30.1 4.4 21 203-223 79-99 (257)
79 KOG4569 Predicted lipase [Lipi 36.8 83 0.0018 32.4 6.3 70 186-263 155-225 (336)
80 TIGR02240 PHA_depoly_arom poly 36.5 56 0.0012 31.4 4.8 36 203-242 90-125 (276)
81 TIGR00976 /NonD putative hydro 36.4 46 0.001 36.3 4.6 37 185-222 79-115 (550)
82 cd07230 Pat_TGL4-5_like Triacy 36.2 40 0.00087 36.0 4.0 30 191-223 91-120 (421)
83 TIGR01738 bioH putative pimelo 36.0 70 0.0015 28.6 5.1 50 188-244 52-101 (245)
84 PLN02571 triacylglycerol lipas 35.4 71 0.0015 34.2 5.6 24 205-228 227-250 (413)
85 PF00450 Peptidase_S10: Serine 34.5 2E+02 0.0043 29.4 8.6 128 97-239 38-175 (415)
86 PF01734 Patatin: Patatin-like 34.4 30 0.00065 30.2 2.3 19 205-223 28-46 (204)
87 PLN02894 hydrolase, alpha/beta 33.8 1.1E+02 0.0023 32.1 6.6 22 203-224 175-196 (402)
88 PRK15231 fimbrial adhesin prot 33.8 60 0.0013 30.0 4.1 62 83-152 78-139 (150)
89 cd07205 Pat_PNPLA6_PNPLA7_NTE1 33.6 56 0.0012 29.6 4.0 32 188-222 15-46 (175)
90 cd07210 Pat_hypo_W_succinogene 33.0 51 0.0011 31.8 3.8 30 190-222 17-46 (221)
91 cd07228 Pat_NTE_like_bacteria 32.8 59 0.0013 29.7 4.1 29 190-221 17-45 (175)
92 PLN02733 phosphatidylcholine-s 32.7 76 0.0017 34.1 5.4 34 187-222 147-180 (440)
93 PTZ00472 serine carboxypeptida 32.3 5.4E+02 0.012 27.7 11.8 52 187-239 153-210 (462)
94 COG1752 RssA Predicted esteras 32.2 48 0.001 33.3 3.6 30 191-223 29-58 (306)
95 PLN00413 triacylglycerol lipas 31.7 69 0.0015 35.0 4.8 36 190-227 272-307 (479)
96 KOG3101 Esterase D [General fu 31.4 19 0.00041 35.7 0.5 35 186-220 118-157 (283)
97 PF05057 DUF676: Putative seri 31.1 42 0.0009 32.1 2.8 46 179-225 54-99 (217)
98 PRK04940 hypothetical protein; 31.0 80 0.0017 30.0 4.6 23 204-230 60-82 (180)
99 PRK00870 haloalkane dehalogena 30.7 1.5E+02 0.0032 28.9 6.7 37 203-243 114-150 (302)
100 PLN02824 hydrolase, alpha/beta 30.6 1.3E+02 0.0029 29.0 6.4 34 204-241 102-135 (294)
101 COG0627 Predicted esterase [Ge 30.6 1.5E+02 0.0033 30.5 6.9 35 205-244 153-187 (316)
102 PF10777 YlaC: Inner membrane 30.3 17 0.00036 33.7 -0.0 15 5-19 49-63 (155)
103 PLN02719 triacylglycerol lipas 29.4 95 0.0021 34.2 5.4 26 203-228 297-322 (518)
104 PF03403 PAF-AH_p_II: Platelet 29.2 35 0.00076 35.8 2.1 42 177-219 182-243 (379)
105 TIGR02427 protocat_pcaD 3-oxoa 29.2 89 0.0019 27.9 4.6 21 203-223 78-98 (251)
106 PF04631 Baculo_44: Baculoviru 29.1 33 0.00072 35.9 1.9 50 77-131 94-149 (371)
107 PF03575 Peptidase_S51: Peptid 28.7 56 0.0012 29.4 3.1 11 206-216 70-80 (154)
108 cd07209 Pat_hypo_Ecoli_Z1214_l 28.6 63 0.0014 30.8 3.6 29 191-222 16-44 (215)
109 cd01819 Patatin_and_cPLA2 Pata 28.5 79 0.0017 28.5 4.0 34 188-222 13-46 (155)
110 KOG1282 Serine carboxypeptidas 28.3 3.4E+02 0.0074 29.5 9.4 143 83-241 56-209 (454)
111 PF06500 DUF1100: Alpha/beta h 28.1 68 0.0015 34.3 4.0 34 186-219 243-276 (411)
112 TIGR03739 PRTRC_D PRTRC system 28.0 97 0.0021 31.3 5.0 34 201-240 272-305 (320)
113 COG0031 CysK Cysteine synthase 28.0 1.4E+02 0.0031 30.6 6.1 57 179-243 238-295 (300)
114 PLN02162 triacylglycerol lipas 27.8 95 0.0021 33.9 5.1 125 99-227 163-301 (475)
115 PLN02753 triacylglycerol lipas 27.5 1.2E+02 0.0025 33.7 5.7 54 203-262 311-370 (531)
116 cd07206 Pat_TGL3-4-5_SDP1 Tria 27.3 74 0.0016 32.6 3.9 30 191-223 87-116 (298)
117 PLN02847 triacylglycerol lipas 27.0 1.5E+02 0.0032 33.6 6.4 24 204-227 251-274 (633)
118 cd07225 Pat_PNPLA6_PNPLA7 Pata 27.0 67 0.0015 32.7 3.6 32 190-224 32-63 (306)
119 cd07208 Pat_hypo_Ecoli_yjju_li 26.3 72 0.0016 31.1 3.6 31 189-221 14-44 (266)
120 cd07231 Pat_SDP1-like Sugar-De 25.9 81 0.0018 32.7 4.0 31 191-224 86-116 (323)
121 PF00151 Lipase: Lipase; Inte 25.7 1.2E+02 0.0026 31.2 5.3 56 189-248 135-193 (331)
122 PF00091 Tubulin: Tubulin/FtsZ 25.6 1.9E+02 0.0042 27.5 6.3 49 184-232 103-156 (216)
123 PRK10749 lysophospholipase L2; 25.1 2E+02 0.0044 28.7 6.7 21 203-223 130-150 (330)
124 PLN02934 triacylglycerol lipas 24.8 1.3E+02 0.0028 33.2 5.5 38 188-227 307-344 (515)
125 TIGR03343 biphenyl_bphD 2-hydr 24.6 99 0.0021 29.3 4.2 23 202-224 99-121 (282)
126 PRK10279 hypothetical protein; 24.5 80 0.0017 32.2 3.6 29 191-222 23-51 (300)
127 PLN02872 triacylglycerol lipas 24.2 1.2E+02 0.0026 32.0 5.0 38 180-220 139-176 (395)
128 COG1075 LipA Predicted acetylt 23.9 1.4E+02 0.003 30.7 5.3 44 180-230 106-149 (336)
129 cd07390 MPP_AQ1575 Aquifex aeo 23.7 93 0.002 28.3 3.6 53 161-214 2-54 (168)
130 KOG3724 Negative regulator of 23.5 1.7E+02 0.0038 34.1 6.2 19 200-218 178-196 (973)
131 PRK11071 esterase YqiA; Provis 23.3 1.6E+02 0.0034 27.4 5.1 34 187-222 46-79 (190)
132 PF01083 Cutinase: Cutinase; 23.0 3.3E+02 0.0072 25.3 7.2 41 182-224 61-101 (179)
133 PF04260 DUF436: Protein of un 22.9 92 0.002 29.5 3.3 26 188-213 3-28 (172)
134 TIGR01392 homoserO_Ac_trn homo 22.7 1.6E+02 0.0036 29.6 5.5 37 204-244 126-163 (351)
135 PLN02761 lipase class 3 family 22.5 1.6E+02 0.0035 32.5 5.7 25 204-228 294-318 (527)
136 PF05448 AXE1: Acetyl xylan es 22.4 80 0.0017 32.3 3.2 116 178-308 148-273 (320)
137 PRK10985 putative hydrolase; P 22.1 1.4E+02 0.003 29.9 4.8 35 186-222 115-149 (324)
138 PRK13917 plasmid segregation p 22.0 2E+02 0.0043 29.6 6.0 27 200-231 289-315 (344)
139 cd07213 Pat17_PNPLA8_PNPLA9_li 22.0 1.3E+02 0.0028 29.9 4.6 38 183-222 13-52 (288)
140 TIGR01836 PHA_synth_III_C poly 21.8 1E+02 0.0023 31.1 3.9 34 187-222 121-154 (350)
141 TIGR01250 pro_imino_pep_2 prol 21.7 2.6E+02 0.0057 25.6 6.3 21 203-223 95-115 (288)
142 PF06821 Ser_hydrolase: Serine 21.5 2.1E+02 0.0045 26.5 5.5 35 186-223 40-74 (171)
143 PF00561 Abhydrolase_1: alpha/ 21.3 1.6E+02 0.0036 26.2 4.8 41 185-227 27-67 (230)
144 KOG4391 Predicted alpha/beta h 21.3 37 0.00079 33.9 0.4 43 187-229 132-174 (300)
145 PF09752 DUF2048: Uncharacteri 21.2 1.8E+02 0.0039 30.5 5.5 50 189-245 163-216 (348)
146 cd07219 Pat_PNPLA1 Patatin-lik 21.2 1.1E+02 0.0023 32.7 3.8 32 191-222 30-62 (382)
147 cd07232 Pat_PLPL Patain-like p 21.1 99 0.0022 32.9 3.7 31 190-223 84-114 (407)
148 cd07221 Pat_PNPLA3 Patatin-lik 21.0 1E+02 0.0023 30.4 3.6 32 191-222 18-50 (252)
149 PF02450 LCAT: Lecithin:choles 20.9 1.3E+02 0.0028 31.5 4.5 37 186-225 104-140 (389)
150 COG4947 Uncharacterized protei 20.7 61 0.0013 31.2 1.8 14 205-218 102-115 (227)
151 cd07229 Pat_TGL3_like Triacylg 20.7 1.1E+02 0.0024 32.6 3.8 30 191-223 101-130 (391)
152 KOG1553 Predicted alpha/beta h 20.4 2.1E+02 0.0046 30.5 5.7 79 178-265 285-364 (517)
153 cd07227 Pat_Fungal_NTE1 Fungal 20.4 1.1E+02 0.0024 30.6 3.7 31 191-224 28-58 (269)
154 COG2382 Fes Enterochelin ester 20.4 1.5E+02 0.0032 30.5 4.5 65 181-250 148-218 (299)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=3.1e-127 Score=948.82 Aligned_cols=383 Identities=57% Similarity=1.105 Sum_probs=371.0
Q ss_pred HHHHHHHHHHHhhhCCcccceEEEecccCCCCccCCCCCCeEEEecCCCCCCCcEEEEecccccccCchhhhcccCCCCC
Q 013734 47 WLNLLVCALILLKADGFNVGITYVENAVVKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLG 126 (437)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~ltl~~~a~~~gA~ClDGSp~~yy~~~g~g~gs~kwlI~leGGG~C~~~~tC~~r~~t~lG 126 (437)
|...++...+.+...+..|++|+|+.|.++||+|||||+||||+.||+|+|+++|||+|||||||.+..+|..|+.|++|
T Consensus 20 ~s~~lv~~~~~~~s~~~~v~ltli~~A~akGAvClDGSlpgYhl~~g~GSg~n~wliqlegGgwC~~i~sCv~Rk~tr~G 99 (402)
T KOG4287|consen 20 WSIPLVFGSLVIGSPGLMVPLTLIRGAAAKGAVCLDGSLPGYHLHRGSGSGANNWLIQLEGGGWCNNIRSCVYRKMTRLG 99 (402)
T ss_pred hhhhhhhhhhcccCccccchhHHHhhHhhcCceecCCCCcceeeccCCCccccceeEecccccccccchhHHHHhhcccc
Confidence 66667776677777778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccccccCCCCCCCcCcccccEEEEecCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCccCeE
Q 013734 127 SSKQMVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNA 206 (437)
Q Consensus 127 SS~~~~~~~~~~Gils~~~~~NP~F~nwN~V~VpYCdGd~~~G~~~~~~~~~~l~frG~~i~~avl~~L~~~gl~~a~~v 206 (437)
||++|++++.|.||||+++++||||+|||+|+||||||++|+||.+..... +++|||++||+|||++|+.+||.+|+++
T Consensus 100 SS~~mek~~~FtGILS~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~t-~l~fRG~rIw~av~~eLl~kGms~Ak~a 178 (402)
T KOG4287|consen 100 SSNYMEKELAFTGILSNKPSENPDFYNWNRVKVRYCDGASFSGDSENKNAT-QLQFRGARIWLAVMDELLAKGMSNAKQA 178 (402)
T ss_pred ccccchhhcceeEEecCCcccCCcccccceeEEeecCCCcccCcccccchh-hhhhhHHHHHHHHHHHHHHhhhhHHHHH
Confidence 999999999999999999999999999999999999999999988754333 9999999999999999999999999999
Q ss_pred EEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCCchhHHHHHHHHHHhhcCcCcccCcccccCCCCccc
Q 013734 207 VLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPASCTSRLSPGLC 286 (437)
Q Consensus 207 lLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~v~~l~g~~~~lp~~C~~~~~~~~C 286 (437)
||+||||||+|+++|||++|++||++++|||++|||||||.+|++|.+.++.+|.++|++||++++||+.|+++.+|++|
T Consensus 179 lLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~~C 258 (402)
T KOG4287|consen 179 LLSGCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPSLC 258 (402)
T ss_pred HhhcCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHhhccCCCeeeeehhhhHHHHhhhcCCCccCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcccCCCce
Q 013734 287 FFPQYMARQITTPLFIINAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRG 366 (437)
Q Consensus 287 ff~q~~~~~I~tPlFilns~YD~wQl~nil~~~~~~~~~~W~~C~~~~~~Cs~~ql~~lq~fr~~~l~al~~~~~~~~~G 366 (437)
|||||+++.|+||+|++|++||+|||++.++|+++|+.|.|..|++|+..|+++||+++|+||.+|+.++..+.++...|
T Consensus 259 fFpq~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ml~a~~~f~~~~~~g 338 (402)
T KOG4287|consen 259 FFPQYVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQMLDAVKIFSSSKQNG 338 (402)
T ss_pred cchHHHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHHHHHHhhhheecccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred EEecCccccccccccccccccCccccCCeeHHHHhhcccccCCCccccCCCCCCCCCCCCCCCC
Q 013734 367 MFIDACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVFD 430 (437)
Q Consensus 367 ~Fi~SC~~Hc~~~~~~~W~~~~~p~v~g~ti~~Av~dW~~~r~~~~~iDc~yPCNptC~~~~~~ 430 (437)
+||+||++|||++.++||+++++|++++++|++||+||||+|..+|+|||||||||||||+.+.
T Consensus 339 ~finsc~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 339 LFINSCFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred eeechHHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 9999999999999999999999999999999999999999998899999999999999998763
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=5.5e-109 Score=842.28 Aligned_cols=359 Identities=50% Similarity=0.969 Sum_probs=343.8
Q ss_pred HHHHHHHhhhCCcccceEEEecccCCCCccCCCCCCeEEEecCCCCCCCcEEEEecccccccCchhhhcccCCCCCCccc
Q 013734 51 LVCALILLKADGFNVGITYVENAVVKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQ 130 (437)
Q Consensus 51 ~~~~~~~~~~~~~~~~ltl~~~a~~~gA~ClDGSp~~yy~~~g~g~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~~ 130 (437)
|+|+++...++...|+||+|++|+++||+|+||||++||+|+|+|++++||||||||||||||.++|..|..|.+|||+.
T Consensus 2 ~~~~~~~~~~~~~~~~l~~l~~~~~~~a~C~DGS~~~yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~ 81 (361)
T PF03283_consen 2 LICLLVASNAQSDEVKLTLLDDAVDTGAVCLDGSPPGYYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKN 81 (361)
T ss_pred eEEEeeeccccccccceEEecCCCCCCCCcCCCCCCcEEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccc
Confidence 34555566678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCcCcccccEEEEecCCCCccCCCcc-cccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEE
Q 013734 131 MVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVE-AVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLS 209 (437)
Q Consensus 131 ~~~~~~~~Gils~~~~~NP~F~nwN~V~VpYCdGd~~~G~~~-~~~~~~~l~frG~~i~~avl~~L~~~gl~~a~~vlLs 209 (437)
|++++.+.|||++++++||+|+|||+|||||||||+|+|+++ ..+++.++||||++|++|||+||+++||++|++|||+
T Consensus 82 ~~~~~~~~Gils~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~a~~vllt 161 (361)
T PF03283_consen 82 WPKTFAFSGILSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPNAKQVLLT 161 (361)
T ss_pred hhhhccccccccCCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcccceEEEe
Confidence 999999999999999999999999999999999999999887 3466789999999999999999999899999999999
Q ss_pred eeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCCchhHHHHHHHHHHhhcCcCcccCcccccCCCCcccccc
Q 013734 210 GCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPASCTSRLSPGLCFFP 289 (437)
Q Consensus 210 G~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~v~~l~g~~~~lp~~C~~~~~~~~Cff~ 289 (437)
||||||+||++|+|+||++||+.++|++++|||||+|.++++|.+.++.++..++++|++++++|++|.++.++. ||||
T Consensus 162 G~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~~~~-C~f~ 240 (361)
T PF03283_consen 162 GCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQYDPE-CFFP 240 (361)
T ss_pred ccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhccCcc-ccch
Confidence 999999999999999999999889999999999999999999999999999999999999999999999887777 9999
Q ss_pred hHHhhccCCCeeeeehhhhHHHHhhhcCCCccCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHhhcccCCCceEEe
Q 013734 290 QYMARQITTPLFIINAAYDSWQIKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGMFI 369 (437)
Q Consensus 290 q~~~~~I~tPlFilns~YD~wQl~nil~~~~~~~~~~W~~C~~~~~~Cs~~ql~~lq~fr~~~l~al~~~~~~~~~G~Fi 369 (437)
||++|+|+||+||+||+||+|||+|+++|.. +.|.+|+.++.+|+++|+++||+||++|+++|+.+.+++++|+||
T Consensus 241 q~~~~~I~tPlFivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~~~~~aL~~~~~~~~~G~Fi 316 (361)
T PF03283_consen 241 QYLYPYIKTPLFIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRSEMLDALKNVSNSPNWGVFI 316 (361)
T ss_pred HHHHhhcCcceeeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEC
Confidence 9999999999999999999999999999954 899999999999999999999999999999999999999999999
Q ss_pred cCccccccccccccccccCccccCCeeHHHHhhcccccCCCcccc
Q 013734 370 DACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKI 414 (437)
Q Consensus 370 ~SC~~Hc~~~~~~~W~~~~~p~v~g~ti~~Av~dW~~~r~~~~~i 414 (437)
+||++|||++.+++|+.+++|+++|+||++||+|||++|+.+|+|
T Consensus 317 ~SC~~Hcq~~~~~~W~~~~~p~v~g~tia~Av~dW~~~r~~~~~~ 361 (361)
T PF03283_consen 317 PSCFAHCQSESSDTWNSPDSPRVNGKTIAEAVGDWYFSRSEVKKI 361 (361)
T ss_pred ccchhhcccccCCcccCCCcccCCCEEHHHHHHHHHhcccccccC
Confidence 999999999999999988899999999999999999999988876
No 3
>PRK10162 acetyl esterase; Provisional
Probab=94.58 E-value=0.13 Score=51.98 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHh--CCC-ccCeEEEEeeChhhHHHHhhhHHHHhh
Q 013734 185 ARVFQAVMEDLMAK--GMK-NAQNAVLSGCSAGGLTSILHCDNFRAL 228 (437)
Q Consensus 185 ~~i~~avl~~L~~~--gl~-~a~~vlLsG~SAGGlga~l~~d~vr~~ 228 (437)
.....++++|+.+. .++ ++++|+|.|.||||.-|+.-+-.+++.
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 45577888888752 233 578999999999999988877777654
No 4
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=94.20 E-value=0.22 Score=51.49 Aligned_cols=70 Identities=17% Similarity=0.082 Sum_probs=42.0
Q ss_pred eeehHHHHHHHHHH-HHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCC
Q 013734 181 HFRGARVFQAVMED-LMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVS 251 (437)
Q Consensus 181 ~frG~~i~~avl~~-L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~ 251 (437)
|.-|-.-++-+++. ++. --.+.++|+|+|.||||--|..=+.++++-=+...++++..==-.++...+.+
T Consensus 143 y~D~~~Al~w~~~~~~~~-~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~ 213 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLK-LGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRT 213 (336)
T ss_pred chHHHHHHHHHHHhHHHH-hCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCC
Confidence 33445555555553 222 24678889999999999888888888876321123455444334455554443
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=92.96 E-value=0.098 Score=48.79 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
..-+.+++++|.+++.-++++|.+.|.|+||+.|.+-.-
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 445778889998878789999999999999999887655
No 6
>PRK13604 luxD acyl transferase; Provisional
Probab=91.20 E-value=1.1 Score=45.86 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccccc
Q 013734 184 GARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 244 (437)
Q Consensus 184 G~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~f 244 (437)
|..-+++++++|+++ ..+++.|.|+|.||.-+++-+. .-+ ++ .++.|||+.
T Consensus 91 g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~----~~~--v~-~lI~~sp~~ 141 (307)
T PRK13604 91 GKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN----EID--LS-FLITAVGVV 141 (307)
T ss_pred cHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc----CCC--CC-EEEEcCCcc
Confidence 678899999999874 3467999999999988655432 111 21 277898875
No 7
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=90.64 E-value=2.3 Score=44.74 Aligned_cols=109 Identities=19% Similarity=0.260 Sum_probs=61.5
Q ss_pred eEEEecC-C--CCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcccccEEEEecCC
Q 013734 87 AYHFDKG-F--GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCD 163 (437)
Q Consensus 87 ~yy~~~g-~--g~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~~~~~~~~~~Gils~~~~~NP~F~nwN~V~VpYCd 163 (437)
+|++.+. . ...++..|||+=|||++-....+.-..-. ...-.|. + . .++.+-|=-
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~------------~i~~~l~---~----~---SILvLDYsL 164 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLL------------NIYKLLP---E----V---SILVLDYSL 164 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHH------------HHHHHcC---C----C---eEEEEeccc
Confidence 4777763 1 23468999999999999876555432100 0011111 0 0 555555532
Q ss_pred CCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHh
Q 013734 164 GASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 227 (437)
Q Consensus 164 Gd~~~G~~~~~~~~~~l~frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~ 227 (437)
-.+ ++....++ ++ -.-+-++.+.|.+. ...++|+|.|.||||--++--..++++
T Consensus 165 t~~--~~~~~~yP-tQ-----L~qlv~~Y~~Lv~~--~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 165 TSS--DEHGHKYP-TQ-----LRQLVATYDYLVES--EGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred ccc--ccCCCcCc-hH-----HHHHHHHHHHHHhc--cCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 110 01111121 11 22345566778831 235899999999999988887777776
No 8
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=90.49 E-value=1 Score=47.50 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHhhhHHH--HhhCCCCcEEEEeecccccccCCCCCchhHHHH
Q 013734 184 GARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDNF--RALFPVGTKVKCFADAGYFINAKDVSGASHIEQ 258 (437)
Q Consensus 184 G~~i~~avl~~L~~~--gl-~~a~~vlLsG~SAGGlga~l~~d~v--r~~lp~~~~V~~l~DSG~fld~~~~~g~~~~~~ 258 (437)
|..-.+++|+|..++ .| +++++|.|.|.||||..+.+|.-.= +.+|. ++|.-||-.+......... +.
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~-----raI~~SGs~~~~~~~~~~~--~~ 257 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFH-----RAILQSGSALSPWATSENP--EQ 257 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBS-----EEEEES--TTSTTSSBSHH--HH
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccc-----ccccccccccccccccccc--ch
Confidence 667788999999973 55 4899999999999999988876552 22332 5666677443322222221 34
Q ss_pred HHHHHHhhcCc
Q 013734 259 FYAQVVATHGS 269 (437)
Q Consensus 259 ~~~~v~~l~g~ 269 (437)
.+..+++.-|.
T Consensus 258 ~~~~la~~lgc 268 (535)
T PF00135_consen 258 QAQKLAKALGC 268 (535)
T ss_dssp HHHHHHHHTTS
T ss_pred hhhhhhhhhcc
Confidence 44555544444
No 9
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=89.58 E-value=0.44 Score=52.74 Aligned_cols=109 Identities=20% Similarity=0.192 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCCchhHHHHHHHHHH
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVV 264 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~v~ 264 (437)
.+-+.+.+++|.+.++-++++|-++|.|.||+-|+.-.-.-- .+ ..+++.+|.--+........ ..++...-
T Consensus 454 ~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f-----~a~~~~~~~~~~~~~~~~~~--~~~~~~~~ 525 (620)
T COG1506 454 LEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RF-----KAAVAVAGGVDWLLYFGEST--EGLRFDPE 525 (620)
T ss_pred HHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hh-----heEEeccCcchhhhhccccc--hhhcCCHH
Confidence 345666777777677888889999999999999876443322 22 13334444221111111100 00111010
Q ss_pred hhcCcCcccCcccccCCCCcccccchHHhhccCCCeeeeehhhh
Q 013734 265 ATHGSAKHLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYD 308 (437)
Q Consensus 265 ~l~g~~~~lp~~C~~~~~~~~Cff~q~~~~~I~tPlFilns~YD 308 (437)
...+ -+.. ..+...=.-|-+..+.|++|++||++.-|
T Consensus 526 ~~~~----~~~~---~~~~~~~~sp~~~~~~i~~P~LliHG~~D 562 (620)
T COG1506 526 ENGG----GPPE---DREKYEDRSPIFYADNIKTPLLLIHGEED 562 (620)
T ss_pred HhCC----Cccc---ChHHHHhcChhhhhcccCCCEEEEeecCC
Confidence 0000 0111 12223445577889999999999999988
No 10
>PRK10566 esterase; Provisional
Probab=89.01 E-value=0.87 Score=43.02 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhh
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~ 221 (437)
-+.+++++|.+++.-+.++|.|.|.|+||.-++.-
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~ 124 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGI 124 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHH
Confidence 34567788876555678999999999999999844
No 11
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=87.97 E-value=0.91 Score=41.86 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHhhhHHHHhh
Q 013734 186 RVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDNFRAL 228 (437)
Q Consensus 186 ~i~~avl~~L~~~--gl-~~a~~vlLsG~SAGGlga~l~~d~vr~~ 228 (437)
.-+.++++|++++ .+ -++++|+|+|.||||.=++.-+-..++.
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh
Confidence 3567788888863 11 3588999999999999888888877775
No 12
>PRK10115 protease 2; Provisional
Probab=87.56 E-value=0.74 Score=51.76 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHh
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 220 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l 220 (437)
..-+.++.++|.++|+-+++++.+.|.||||+-+..
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~ 540 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGV 540 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHH
Confidence 456778999999999999999999999999986543
No 13
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=86.72 E-value=2.4 Score=36.55 Aligned_cols=55 Identities=24% Similarity=0.442 Sum_probs=31.6
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhhCC-CCcEEEEeecccccccCCCCCchhHHHHHHHHH
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRALFP-VGTKVKCFADAGYFINAKDVSGASHIEQFYAQV 263 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~lp-~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~v 263 (437)
..+|+++|+|-||-=|.+-+-++.+..+ ...++++++=++.-+ |+..+...++..
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~------~~~~~~~~~~~~ 118 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV------GNSAFAKWYDSL 118 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--------BEHHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc------cCHHHHHHHHhh
Confidence 3789999999999755555555555443 234566666554332 344445555543
No 14
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=82.55 E-value=1.8 Score=45.86 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHhhhHH
Q 013734 184 GARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 184 G~~i~~avl~~L~~~--gl-~~a~~vlLsG~SAGGlga~l~~d~ 224 (437)
|..-..++|+|+.++ .+ .++++|.|.|.||||..+.++.-.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 567788999999863 23 589999999999999888776543
No 15
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=82.01 E-value=2 Score=36.48 Aligned_cols=40 Identities=28% Similarity=0.434 Sum_probs=29.9
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 183 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 183 rG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
.+...++++++++.. ...++++++|.|.|+||..+..-..
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA-GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH-HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh-hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 344478888888754 2348999999999999987766444
No 16
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=81.18 E-value=2.1 Score=40.11 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
..++.+++++.++.--++++|+|.|.|+||..++.-+
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHH
Confidence 4567788888864334668999999999999876544
No 17
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=80.94 E-value=3.3 Score=41.13 Aligned_cols=41 Identities=22% Similarity=0.167 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhC--C-CccCeEEEEeeChhhHHHHhhhHHHHhh
Q 013734 188 FQAVMEDLMAKG--M-KNAQNAVLSGCSAGGLTSILHCDNFRAL 228 (437)
Q Consensus 188 ~~avl~~L~~~g--l-~~a~~vlLsG~SAGGlga~l~~d~vr~~ 228 (437)
..+++.|+.++. + -++++|+|+|+||||.=+..-+...++.
T Consensus 133 ~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 133 AYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred HHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 667788888632 3 3689999999999999999999999986
No 18
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=79.98 E-value=7.6 Score=37.80 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCC
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 231 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~ 231 (437)
.+.++++++..+.--++++|.++|.|+||.-+. .+.-.+|.
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 577888988875444889999999999996664 34444553
No 19
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=78.59 E-value=10 Score=39.94 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhh
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~ 221 (437)
..++++++|.....-+.++|.+.|.|.||.-++.-
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~ 282 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRL 282 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHH
Confidence 34789999886433367899999999999877643
No 20
>PLN02408 phospholipase A1
Probab=74.50 E-value=10 Score=39.89 Aligned_cols=64 Identities=14% Similarity=0.224 Sum_probs=40.9
Q ss_pred HHHHHHhCCCc-cCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCCchhHHHHHHHH
Q 013734 192 MEDLMAKGMKN-AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 262 (437)
Q Consensus 192 l~~L~~~gl~~-a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~ 262 (437)
|+.|+++ .++ ..+|+++|+|-||-=|.+.+-+++..++....|.++.=++.= -|+....++++.
T Consensus 188 I~~ll~~-y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPR------VGN~~Fa~~~~~ 252 (365)
T PLN02408 188 IARLLQS-YGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPR------VGNRSFRRQLEK 252 (365)
T ss_pred HHHHHHh-cCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCC------cccHHHHHHHHh
Confidence 4444542 333 347999999999999999999999887643345555544432 345454555543
No 21
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=73.90 E-value=7.5 Score=40.63 Aligned_cols=53 Identities=23% Similarity=0.310 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhC-CCccCeEEEEeeChhhHHHHhhhHHHHhh-CC--CCcEEEEeecccc
Q 013734 188 FQAVMEDLMAKG-MKNAQNAVLSGCSAGGLTSILHCDNFRAL-FP--VGTKVKCFADAGY 243 (437)
Q Consensus 188 ~~avl~~L~~~g-l~~a~~vlLsG~SAGGlga~l~~d~vr~~-lp--~~~~V~~l~DSG~ 243 (437)
.+|.++.|.++. =.+|+++++-|.|-||.=+- ..+++. +. .+++..++.|-||
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa---~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA---EALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHH---HHHHhcccccCCCeeEEEEecCCc
Confidence 577888888643 35899999999999985322 233332 21 2577778888875
No 22
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=73.48 E-value=8.7 Score=38.14 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccC
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINA 247 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~ 247 (437)
.+.+.|+.|.++.--..+++.|.|+|.||.-+..-+.++.+++ .++.++.=+|.++..
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v---~~iv~LDPa~p~f~~ 152 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKL---GRITGLDPAGPLFSG 152 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCcc---ceeEEecCCcccccC
Confidence 4556667776531124678999999999998887776655544 245555546665543
No 23
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=71.46 E-value=4.7 Score=38.24 Aligned_cols=43 Identities=16% Similarity=0.296 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCCc-cCeEEEEeeChhhHHHHhhhHHHHhhC
Q 013734 186 RVFQAVMEDLMAKGMKN-AQNAVLSGCSAGGLTSILHCDNFRALF 229 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~-a~~vlLsG~SAGGlga~l~~d~vr~~l 229 (437)
-+.++++.++.+ .++. +++..|+|+|.||++|+..+=+--+.|
T Consensus 97 ~l~~el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 97 FLTEELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp HHHTHHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHSTTTE
T ss_pred ehhccchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCcccc
Confidence 344555555554 4543 333999999999999997554433444
No 24
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=70.23 E-value=53 Score=35.96 Aligned_cols=139 Identities=16% Similarity=0.132 Sum_probs=80.0
Q ss_pred CeEEEecCC-CCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEE--e
Q 013734 86 PAYHFDKGF-GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV--R 160 (437)
Q Consensus 86 ~~yy~~~g~-g~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~~~~~~~~~~Gils~~~~~NP~F~--nwN~V~V--p 160 (437)
..||..++. ....+-+++.|.||=-|-+..-=.. .+|- ..+.++ . ++....||+=+ +.+.||| |
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~----elGP-----~rI~~~-~-~P~~~~NP~SW~~~adLvFiDqP 155 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLG----ELGP-----KRIQSG-T-SPSYPDNPGSWLDFADLVFIDQP 155 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhhh----hcCC-----eeeeCC-C-CCCCCCCccccccCCceEEEecC
Confidence 445666663 2235789999999988766532211 2231 112211 1 33333699443 4579999 5
Q ss_pred cCCCCccC-CCcccccCCCceeeeh---HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhh---CCCCc
Q 013734 161 YCDGASFT-GDVEAVNPANNLHFRG---ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRAL---FPVGT 233 (437)
Q Consensus 161 YCdGd~~~-G~~~~~~~~~~l~frG---~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~---lp~~~ 233 (437)
-=||-|.+ |+... ...+=.| ....+-+++++-. -.+......|+|.|-||.=...-+..+.+. +...+
T Consensus 156 vGTGfS~a~~~e~~----~d~~~~~~D~~~~~~~f~~~fp~-~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~ 230 (498)
T COG2939 156 VGTGFSRALGDEKK----KDFEGAGKDVYSFLRLFFDKFPH-YARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNV 230 (498)
T ss_pred cccCcccccccccc----cchhccchhHHHHHHHHHHHHHH-HhhhcCceeEeeccccchhhHHHHHHHHHhccccCCce
Confidence 66776665 33211 1111111 2344555566653 566778899999999998777777777774 33345
Q ss_pred EEEEeec
Q 013734 234 KVKCFAD 240 (437)
Q Consensus 234 ~V~~l~D 240 (437)
.++.+.+
T Consensus 231 nlssvli 237 (498)
T COG2939 231 NLSSVLI 237 (498)
T ss_pred Eeeeeee
Confidence 6666655
No 25
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=70.01 E-value=5.6 Score=38.99 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=19.9
Q ss_pred ccCeEEEEeeChhhHHHHhhhHHH
Q 013734 202 NAQNAVLSGCSAGGLTSILHCDNF 225 (437)
Q Consensus 202 ~a~~vlLsG~SAGGlga~l~~d~v 225 (437)
+.+++.|+|.|+||..|+..+-.-
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~~ 159 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALKN 159 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHhC
Confidence 567899999999999998776543
No 26
>PLN02802 triacylglycerol lipase
Probab=69.31 E-value=14 Score=40.31 Aligned_cols=52 Identities=19% Similarity=0.278 Sum_probs=36.3
Q ss_pred CeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCCchhHHHHHHH
Q 013734 204 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYA 261 (437)
Q Consensus 204 ~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~ 261 (437)
.+|+++|+|-||-=|.+.+.+++...+....|.++.=++.= -|+....++++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPR------VGN~aFA~~~~ 381 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPR------VGNRAFADRLN 381 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCC------cccHHHHHHHH
Confidence 47999999999999999999999887653345665544432 35544444443
No 27
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=68.35 E-value=15 Score=34.78 Aligned_cols=39 Identities=23% Similarity=0.343 Sum_probs=29.3
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccc
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 242 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG 242 (437)
..+++++|+|-||-=|.+.+-.++...+ ..++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEEeCC
Confidence 4679999999999988888888887763 34566665444
No 28
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=68.05 E-value=11 Score=35.32 Aligned_cols=53 Identities=17% Similarity=0.313 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccc
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFI 245 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fl 245 (437)
.+.++|+.+.+++ -.+++|+|.|.|-||.-|+.-+=.-.+.+ + -++.=||++.
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~---~--gvv~lsG~~~ 141 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPL---A--GVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTS---S--EEEEES---T
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCc---C--EEEEeecccc
Confidence 3556666666545 67789999999999988876543332322 2 2334456664
No 29
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=66.98 E-value=7.4 Score=41.22 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHH---hC---CCccCeEEEEeeChhhHHHHhhhHHHHhhC
Q 013734 186 RVFQAVMEDLMA---KG---MKNAQNAVLSGCSAGGLTSILHCDNFRALF 229 (437)
Q Consensus 186 ~i~~avl~~L~~---~g---l~~a~~vlLsG~SAGGlga~l~~d~vr~~l 229 (437)
.-.+.+.++|++ +. ..++++.+|+|.|.||++|+.-+=.--++|
T Consensus 264 ~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~F 313 (411)
T PRK10439 264 DFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERF 313 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccc
Confidence 334555666664 12 357889999999999999986544333334
No 30
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=66.13 E-value=8.9 Score=31.73 Aligned_cols=45 Identities=27% Similarity=0.470 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHh-CCCccCeEEEEeeChh-hHHHHhhhHHHHhhCCCCcE
Q 013734 185 ARVFQAVMEDLMAK-GMKNAQNAVLSGCSAG-GLTSILHCDNFRALFPVGTK 234 (437)
Q Consensus 185 ~~i~~avl~~L~~~-gl~~a~~vlLsG~SAG-Glga~l~~d~vr~~lp~~~~ 234 (437)
.++++.-|++.+++ .+..+++||+.|+|.| |+++ +|...|..++.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAs-----RIa~aFg~gA~ 66 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLAS-----RIAAAFGAGAD 66 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHH-----HHHHHHCC--E
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHH-----HHHHHhcCCCC
Confidence 56788888888873 4577899999999998 4443 45555544443
No 31
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=65.63 E-value=7 Score=38.00 Aligned_cols=32 Identities=31% Similarity=0.495 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
|++.|+++|+.. +...++|.|||++-+.+++-
T Consensus 17 Vl~~L~e~gi~~-~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 17 VLSLLIEAGVIN-ETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHcCCCC-CCCEEEEEcHHHHHHHHHHc
Confidence 667788777652 34689999999998777654
No 32
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=65.57 E-value=6.2 Score=44.22 Aligned_cols=39 Identities=26% Similarity=0.383 Sum_probs=32.3
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhH--HHHhh
Q 013734 183 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGL--TSILH 221 (437)
Q Consensus 183 rG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGl--ga~l~ 221 (437)
+...-+-|+-+.|...|+...++++..|.||||+ ||++|
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHh
Confidence 3456788999999999999999999999999996 44443
No 33
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.72 E-value=63 Score=33.31 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhh
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~ 221 (437)
+++.++.|+.+.=-++++|.++|-|+||.=+..-
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~l 161 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANRL 161 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHH
Confidence 6778888886544477899999999999654433
No 34
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=64.71 E-value=7.6 Score=35.49 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=23.9
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 190 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 190 avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
-|++.|.++|+. --+++|+|||++-+.+.+-
T Consensus 15 Gvl~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 15 GVAKALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 366777777776 6689999999998776654
No 35
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=64.70 E-value=17 Score=32.20 Aligned_cols=43 Identities=19% Similarity=0.144 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHhhhHHHHhhC
Q 013734 186 RVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALF 229 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~--~a~~vlLsG~SAGGlga~l~~d~vr~~l 229 (437)
.+.+.+.+.+.+ .+. ...+++++|+|.||-=|.+-+-+++...
T Consensus 9 ~~~~~i~~~~~~-~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 9 SLANLVLPLLKS-ALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred HHHHHHHHHHHH-HHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 344444444332 332 4578999999999977777677776654
No 36
>PLN02454 triacylglycerol lipase
Probab=63.75 E-value=23 Score=37.82 Aligned_cols=66 Identities=17% Similarity=0.203 Sum_probs=39.6
Q ss_pred HHHHHHHHhCCCccC-eEEEEeeChhhHHHHhhhHHHHhhCC--CCcEEEEeecccccccCCCCCchhHHHHHHHH
Q 013734 190 AVMEDLMAKGMKNAQ-NAVLSGCSAGGLTSILHCDNFRALFP--VGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 262 (437)
Q Consensus 190 avl~~L~~~gl~~a~-~vlLsG~SAGGlga~l~~d~vr~~lp--~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~ 262 (437)
+.|++|+++ .++.+ +|+++|+|-||--|.+.+.+++.... ....|.++.=++.= -|+....++++.
T Consensus 214 ~~V~~l~~~-Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPR------VGN~~Fa~~~~~ 282 (414)
T PLN02454 214 AKIKELLER-YKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQ------VGNKEFNDRFKE 282 (414)
T ss_pred HHHHHHHHh-CCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCc------ccCHHHHHHHHh
Confidence 334445543 33333 69999999999999999988876532 23345555544322 255444555544
No 37
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=60.35 E-value=8.8 Score=37.77 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFR 226 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr 226 (437)
-+++++. -++++++++++|+|||+-=+..-.-++|
T Consensus 124 gv~filk-~~~n~k~l~~gGHSaGAHLa~qav~R~r 158 (270)
T KOG4627|consen 124 GVNFILK-YTENTKVLTFGGHSAGAHLAAQAVMRQR 158 (270)
T ss_pred HHHHHHH-hcccceeEEEcccchHHHHHHHHHHHhc
Confidence 3566774 6899999999999999976655444433
No 38
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=59.74 E-value=24 Score=35.11 Aligned_cols=66 Identities=21% Similarity=0.253 Sum_probs=42.0
Q ss_pred CCccCeEEEEeeChhhHHHHhhhHHHHhhCC------CCcEEEEee-cccccccCCCCCchhHHHHHHHHHHh
Q 013734 200 MKNAQNAVLSGCSAGGLTSILHCDNFRALFP------VGTKVKCFA-DAGYFINAKDVSGASHIEQFYAQVVA 265 (437)
Q Consensus 200 l~~a~~vlLsG~SAGGlga~l~~d~vr~~lp------~~~~V~~l~-DSG~fld~~~~~g~~~~~~~~~~v~~ 265 (437)
...++.|+++|||-||+|--+--..-++-+- +-.+..-+. |+|.+.-.-|++-.+.+..+-.++.+
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 4578899999999999997665444443221 001122233 88988766677766666666666654
No 39
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=59.51 E-value=19 Score=34.06 Aligned_cols=37 Identities=27% Similarity=0.460 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCC
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 230 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp 230 (437)
..+.++.++++ . .++.++|.|+|.||+-|.. ++++++
T Consensus 45 a~~~l~~~i~~-~-~~~~~~liGSSlGG~~A~~----La~~~~ 81 (187)
T PF05728_consen 45 AIAQLEQLIEE-L-KPENVVLIGSSLGGFYATY----LAERYG 81 (187)
T ss_pred HHHHHHHHHHh-C-CCCCeEEEEEChHHHHHHH----HHHHhC
Confidence 33455555543 2 2233999999999977764 455554
No 40
>PHA02857 monoglyceride lipase; Provisional
Probab=58.58 E-value=51 Score=31.45 Aligned_cols=21 Identities=33% Similarity=0.308 Sum_probs=16.5
Q ss_pred cCeEEEEeeChhhHHHHhhhH
Q 013734 203 AQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d 223 (437)
.+.++|.|.|.||.=++..+.
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAY 116 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHH
Confidence 456999999999987766553
No 41
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=57.80 E-value=23 Score=33.80 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccc
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFI 245 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fl 245 (437)
-++.+++||.++.--++++|-|.|.|-||--|++ ++..+|.=..|..++.|++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALl----lAs~~~~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALL----LASRFPQISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHH----HHHHSSSEEEEEEES--SB--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHH----HHhcCCCccEEEEeCCceeEe
Confidence 3688999999754446789999999999988886 445566423366667776655
No 42
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=57.73 E-value=11 Score=37.10 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=23.3
Q ss_pred HHHHHHHhCCCccCeE-EEEeeChhhHHHHhhh
Q 013734 191 VMEDLMAKGMKNAQNA-VLSGCSAGGLTSILHC 222 (437)
Q Consensus 191 vl~~L~~~gl~~a~~v-lLsG~SAGGlga~l~~ 222 (437)
|++.|.++|..--+++ .++|+|||++-+.+.+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 5677777776433333 7999999999887764
No 43
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=57.67 E-value=36 Score=31.49 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecc
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 241 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DS 241 (437)
.....++.+++. .++ ...+|.|.|.||+=|+-=+..+.+. ...+...++.|+
T Consensus 51 la~~y~~~I~~~-~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 51 LASRYAEAIRAR-QPE-GPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHH-TSS-SSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHhhhh-CCC-CCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 444555555542 122 2899999999999999888888877 333444556675
No 44
>PLN02442 S-formylglutathione hydrolase
Probab=57.02 E-value=11 Score=37.42 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=18.8
Q ss_pred ccCeEEEEeeChhhHHHHhhhH
Q 013734 202 NAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 202 ~a~~vlLsG~SAGGlga~l~~d 223 (437)
+.++++|+|.|+||.+|+..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 6688999999999999987554
No 45
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=55.89 E-value=22 Score=35.70 Aligned_cols=48 Identities=17% Similarity=0.248 Sum_probs=33.3
Q ss_pred CCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcE--EEEeecccccccC
Q 013734 199 GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTK--VKCFADAGYFINA 247 (437)
Q Consensus 199 gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~--V~~l~DSG~fld~ 247 (437)
|++...+|.+.|.|=||.+|..-+ .++..+-++.+ +++.+=.|.-.|.
T Consensus 66 gl~~~~~v~l~GySqGG~Aa~~AA-~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 66 GLSPSSRVALWGYSQGGQAALWAA-ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred CCCCCCCEEEEeeCccHHHHHHHH-HHhHHhCcccccceeEEeccCCccCH
Confidence 555668999999999999997654 55555544566 6666655554443
No 46
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=55.86 E-value=13 Score=36.55 Aligned_cols=31 Identities=29% Similarity=0.176 Sum_probs=20.8
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
|++.|.++|...... .++|+|||++-+...+
T Consensus 18 Vl~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 18 VAVCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 556677666332222 3999999999887654
No 47
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=55.75 E-value=17 Score=35.20 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHh---CCCccCeEEEEeeChhhHHHHh
Q 013734 187 VFQAVMEDLMAK---GMKNAQNAVLSGCSAGGLTSIL 220 (437)
Q Consensus 187 i~~avl~~L~~~---gl~~a~~vlLsG~SAGGlga~l 220 (437)
-+...++.+++. .....++|+|.|+|.||+-+-.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~ 101 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARS 101 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHH
Confidence 345555666542 3468899999999999986544
No 48
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=55.36 E-value=13 Score=36.37 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCccCe-EEEEeeChhhHHHHhhh
Q 013734 191 VMEDLMAKGMKNAQN-AVLSGCSAGGLTSILHC 222 (437)
Q Consensus 191 vl~~L~~~gl~~a~~-vlLsG~SAGGlga~l~~ 222 (437)
|++-|+++|..-..+ -.++|+|||++-+...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 567777777643332 58999999999877544
No 49
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=54.63 E-value=36 Score=33.76 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhh
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~ 221 (437)
+.+.++++.|....-....+++|.|.|.||.-++..
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHH
Confidence 457778888875321123469999999999877643
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=53.51 E-value=23 Score=34.64 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
.-+.++++.|.+ ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~-~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE-AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh-hCCCCCcEEEEEECHHHHHHHHHh
Confidence 457888888875 344457899999999999888764
No 51
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=52.40 E-value=16 Score=39.75 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=30.5
Q ss_pred ehHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHH
Q 013734 183 RGARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSI 219 (437)
Q Consensus 183 rG~~i~~avl~~L~~~--gl-~~a~~vlLsG~SAGGlga~ 219 (437)
-|..-..++|+|..++ .| +++++|-|.|.||||..++
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~ 195 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASIL 195 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHH
Confidence 5777888999999863 45 5899999999999998754
No 52
>PLN03037 lipase class 3 family protein; Provisional
Probab=50.92 E-value=45 Score=36.76 Aligned_cols=55 Identities=13% Similarity=0.180 Sum_probs=37.7
Q ss_pred ccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCCchhHHHHHHHH
Q 013734 202 NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 262 (437)
Q Consensus 202 ~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~ 262 (437)
+..+|+++|+|-||-=|.+++-+++..+|....|.++.=++. --|+....++++.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsP------RVGN~aFA~~~~~ 370 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAP------RVGNLAFKEKLNE 370 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCC------CccCHHHHHHHHh
Confidence 456799999999999999999999988774324555554332 2355555555544
No 53
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=49.72 E-value=36 Score=33.92 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
-+.+++++|.+. ..++|+|.|.|.||.=++..+
T Consensus 85 Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 85 DVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHH
Confidence 355667777653 257899999999998877544
No 54
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=48.78 E-value=61 Score=28.34 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=24.8
Q ss_pred CeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccccc
Q 013734 204 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 244 (437)
Q Consensus 204 ~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~f 244 (437)
++++|.|+|.||.-++..+.. .|..++-.++.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAAR----YPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHH----SGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccc----cccccccceeeccccc
Confidence 689999999999877765543 4444443445565554
No 55
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=48.27 E-value=21 Score=35.77 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCC---------ccCeEEEEeeChhhHHHHhhhHHHH
Q 013734 186 RVFQAVMEDLMAKGMK---------NAQNAVLSGCSAGGLTSILHCDNFR 226 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~---------~a~~vlLsG~SAGGlga~l~~d~vr 226 (437)
+.+.++++||.+ ++. +.+++-|+|+|+||-.++..+-..+
T Consensus 65 ~~~~~vi~Wl~~-~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 65 ASAAEVIDWLAK-GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred HHHHHHHHHHHh-cchhhccccccccccceEEeeeCCCCHHHHHHHhhhc
Confidence 357888999875 332 4569999999999998876555543
No 56
>PRK11460 putative hydrolase; Provisional
Probab=47.46 E-value=28 Score=33.40 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhh
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~ 221 (437)
+.+.++++.++.--+.++|+|.|.|.||.-++.-
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~ 120 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEA 120 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHH
Confidence 3445555554322356789999999999988753
No 57
>PLN02209 serine carboxypeptidase
Probab=47.43 E-value=3e+02 Score=29.53 Aligned_cols=131 Identities=11% Similarity=0.085 Sum_probs=63.6
Q ss_pred CCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEE--ecCCCCccCCCcc
Q 013734 97 GINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV--RYCDGASFTGDVE 172 (437)
Q Consensus 97 gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~~~~~~~~~~Gils~~~~~NP~F~--nwN~V~V--pYCdGd~~~G~~~ 172 (437)
..+-++|+|+||=-|-+..-... .+|--..-++ ...|-. ..-..||+-+ ..|+||| |-=+|=|++.+..
T Consensus 66 ~~~Pl~lWlnGGPG~SS~~g~f~----e~GP~~~~~~--~~~~~~-~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~ 138 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCLSGLFF----ENGPLALKNK--VYNGSV-PSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPI 138 (437)
T ss_pred CCCCEEEEECCCCcHHHhhhHHH----hcCCceeccC--CCCCCc-ccceeCCCchhhcCcEEEecCCCCCCccCCCCCC
Confidence 34689999999965655432222 1221110000 000000 1234577332 3577888 4445555543321
Q ss_pred cccCCCceeeehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHhhhHHHHhhCC----CCcEEEEee
Q 013734 173 AVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFP----VGTKVKCFA 239 (437)
Q Consensus 173 ~~~~~~~l~frG~~i~~avl~~L~~~gl~--~a~~vlLsG~SAGGlga~l~~d~vr~~lp----~~~~V~~l~ 239 (437)
. +...+ -....+++.+..++.. ++ +...+.|+|.|-||.=+..-+.+|.+.-. ....++++.
T Consensus 139 ~-~~~~~--~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ 206 (437)
T PLN02209 139 E-RTSDT--SEVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYV 206 (437)
T ss_pred C-ccCCH--HHHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEE
Confidence 1 11110 1123444444444432 33 23469999999999766666667755321 135566654
No 58
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=47.16 E-value=28 Score=37.46 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHhhh
Q 013734 187 VFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 187 i~~avl~~L~~~--gl-~~a~~vlLsG~SAGGlga~l~~ 222 (437)
-..++|+|+.++ .+ +++++|.|.|.||||..+-++.
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHh
Confidence 466778888753 34 5999999999999998875543
No 59
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=45.81 E-value=27 Score=32.62 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
...+++.+++|.+..-...++|.+.|.|.||.-++..+
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 44566778888864434789999999999998887543
No 60
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=45.46 E-value=44 Score=29.76 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=18.4
Q ss_pred ccCeEEEEeeChhhHHHHhhhHH
Q 013734 202 NAQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 202 ~a~~vlLsG~SAGGlga~l~~d~ 224 (437)
..++++|.|.|+||.-++..+..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh
Confidence 34679999999999888776554
No 61
>PLN02324 triacylglycerol lipase
Probab=44.93 E-value=69 Score=34.36 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCCcc-CeEEEEeeChhhHHHHhhhHHHHhh
Q 013734 189 QAVMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHCDNFRAL 228 (437)
Q Consensus 189 ~avl~~L~~~gl~~a-~~vlLsG~SAGGlga~l~~d~vr~~ 228 (437)
.+-|.+|+++ .++. .+|+++|+|-||-=|.|.+-++...
T Consensus 200 l~eV~~L~~~-Yp~e~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 200 QGELKRLLEL-YKNEEISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred HHHHHHHHHH-CCCCCceEEEecCcHHHHHHHHHHHHHHHh
Confidence 3334455542 4443 4799999999998888888777653
No 62
>PLN00021 chlorophyllase
Probab=43.48 E-value=28 Score=35.46 Aligned_cols=39 Identities=23% Similarity=0.147 Sum_probs=26.7
Q ss_pred HHHHHHHHHHh---C-----CCccCeEEEEeeChhhHHHHhhhHHHH
Q 013734 188 FQAVMEDLMAK---G-----MKNAQNAVLSGCSAGGLTSILHCDNFR 226 (437)
Q Consensus 188 ~~avl~~L~~~---g-----l~~a~~vlLsG~SAGGlga~l~~d~vr 226 (437)
.+++++|+.+. - -.+.+++.|.|+|+||..++.-+-...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 45566666641 1 134578999999999999887664443
No 63
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=42.85 E-value=29 Score=31.85 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=22.0
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 189 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 189 ~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
-.|++.|.++++.- =+++|.||||+=+.+.+
T Consensus 15 ~Gvl~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 15 IGALKALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 35667777666543 68999999998765544
No 64
>PLN02310 triacylglycerol lipase
Probab=42.39 E-value=68 Score=34.29 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=30.1
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccc
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGY 243 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~ 243 (437)
..+|+++|+|-||-=|.+.+..++...+ ...|.++.=++.
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~-~~~v~vyTFGsP 247 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIP-DLFVSVISFGAP 247 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCc-CcceeEEEecCC
Confidence 3579999999999999999988887666 344555555443
No 65
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=42.30 E-value=31 Score=34.90 Aligned_cols=56 Identities=23% Similarity=0.242 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHh--hCCCCcEEEEeeccccc
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA--LFPVGTKVKCFADAGYF 244 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~--~lp~~~~V~~l~DSG~f 244 (437)
..=++.+|.+|.++ -+-+++=+.|+|+||+|.....-...+ .+|+ .+ +.++=+|.|
T Consensus 119 s~wlk~~msyL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~-ln-K~V~l~gpf 176 (288)
T COG4814 119 SKWLKKAMSYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP-LN-KLVSLAGPF 176 (288)
T ss_pred HHHHHHHHHHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc-hh-heEEecccc
Confidence 44589999999973 344556688999999998877766653 4775 33 333334444
No 66
>PRK10673 acyl-CoA esterase; Provisional
Probab=42.13 E-value=52 Score=30.63 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=22.8
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccc
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 242 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG 242 (437)
.+++.|.|+|.||.-++..+.. .|..++-.++.|++
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~----~~~~v~~lvli~~~ 115 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTAL----APDRIDKLVAIDIA 115 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHh----CHhhcceEEEEecC
Confidence 3569999999999877765533 44333334444544
No 67
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=41.79 E-value=66 Score=32.04 Aligned_cols=62 Identities=26% Similarity=0.263 Sum_probs=37.7
Q ss_pred eeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHH--HhhCCCCcEEEEeeccccccc
Q 013734 181 HFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF--RALFPVGTKVKCFADAGYFIN 246 (437)
Q Consensus 181 ~frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~v--r~~lp~~~~V~~l~DSG~fld 246 (437)
+.+-.+=+++||..|.++ -.-+++=+.|+|.||++++...-.- ...+|+ + -+++.=+|.|=.
T Consensus 82 ~~~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~-l-~K~V~Ia~pfng 145 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPK-L-NKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-E-E-EEEEEES--TTT
T ss_pred HHHHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCcc-c-ceEEEeccccCc
Confidence 344456688999999874 3578899999999999987544332 233664 2 244555666643
No 68
>PRK10349 carboxylesterase BioH; Provisional
Probab=41.78 E-value=61 Score=30.53 Aligned_cols=48 Identities=17% Similarity=0.206 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccc
Q 013734 189 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGY 243 (437)
Q Consensus 189 ~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~ 243 (437)
+...+++.+.+ .+++.|.|.|.||.-++..+- ..|..++-.++.|+..
T Consensus 62 ~~~~~~l~~~~---~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lili~~~~ 109 (256)
T PRK10349 62 ADMAEAVLQQA---PDKAIWLGWSLGGLVASQIAL----THPERVQALVTVASSP 109 (256)
T ss_pred HHHHHHHHhcC---CCCeEEEEECHHHHHHHHHHH----hChHhhheEEEecCcc
Confidence 34455555432 367999999999998875543 3444344344456543
No 69
>PLN02965 Probable pheophorbidase
Probab=41.40 E-value=64 Score=30.64 Aligned_cols=38 Identities=18% Similarity=0.214 Sum_probs=23.1
Q ss_pred CCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecc
Q 013734 200 MKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 241 (437)
Q Consensus 200 l~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DS 241 (437)
++..++++|.|+|.||.=+...+. ..|..++-.++.++
T Consensus 68 l~~~~~~~lvGhSmGG~ia~~~a~----~~p~~v~~lvl~~~ 105 (255)
T PLN02965 68 LPPDHKVILVGHSIGGGSVTEALC----KFTDKISMAIYVAA 105 (255)
T ss_pred cCCCCCEEEEecCcchHHHHHHHH----hCchheeEEEEEcc
Confidence 433368999999999975554433 34544443444444
No 70
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=41.34 E-value=71 Score=31.23 Aligned_cols=24 Identities=29% Similarity=0.493 Sum_probs=18.7
Q ss_pred CCccCeEEEEeeChhhHHHHhhhH
Q 013734 200 MKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 200 l~~a~~vlLsG~SAGGlga~l~~d 223 (437)
+...++++|.|+|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 434588999999999997776654
No 71
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=41.25 E-value=37 Score=33.06 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHH
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 225 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~v 225 (437)
...+++++++|.++...++++|.++|.|.||.=|++.+...
T Consensus 93 ~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 93 LADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 45688999999976557889999999999998888765543
No 72
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=41.13 E-value=24 Score=39.73 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=30.8
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHH
Q 013734 183 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLT 217 (437)
Q Consensus 183 rG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlg 217 (437)
++..-+.|..+.|.++|+-.++++-+.|.||||+=
T Consensus 528 N~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 528 NSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred ccHHHHHHHHHHHHHcCCCCccceeEecccCccch
Confidence 34556889999999999999999999999999974
No 73
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=40.94 E-value=68 Score=29.98 Aligned_cols=21 Identities=19% Similarity=0.098 Sum_probs=16.6
Q ss_pred cCeEEEEeeChhhHHHHhhhH
Q 013734 203 AQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d 223 (437)
.++++|.|.|.||.-++..+.
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~ 114 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLAL 114 (278)
T ss_pred CCCceEEEECccHHHHHHHHH
Confidence 367899999999988776543
No 74
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=40.47 E-value=71 Score=34.49 Aligned_cols=55 Identities=15% Similarity=0.099 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHh-CCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCC-cEEEEeeccccccc
Q 013734 187 VFQAVMEDLMAK-GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVG-TKVKCFADAGYFIN 246 (437)
Q Consensus 187 i~~avl~~L~~~-gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~-~~V~~l~DSG~fld 246 (437)
.+.+.|++|.+. ++ ..++|.|.|+|.||.-|..-.. +.|.. .++.++.=+|.++.
T Consensus 102 ~la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag~----~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 102 DVAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAGS----LTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred HHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHHH----hCCcceeEEEEEcCCCCccc
Confidence 456677777642 43 5688999999999987776543 33432 23555555666544
No 75
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=39.72 E-value=83 Score=30.67 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=39.0
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCC---CCcEEEEeecc
Q 013734 183 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP---VGTKVKCFADA 241 (437)
Q Consensus 183 rG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp---~~~~V~~l~DS 241 (437)
.|..++.+.|+... ...+.|++.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~~----~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAAI----AAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhhc----cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 47777777777433 366789999999999999988888887432 13455555553
No 76
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.15 E-value=35 Score=33.80 Aligned_cols=31 Identities=29% Similarity=0.258 Sum_probs=20.3
Q ss_pred HHHHHHHhCCC-ccCeEEEEeeChhhHHHHhh
Q 013734 191 VMEDLMAKGMK-NAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 191 vl~~L~~~gl~-~a~~vlLsG~SAGGlga~l~ 221 (437)
|++.|++++.. -.+.-.++|+|||++.+...
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~ 53 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATAL 53 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHH
Confidence 55667665532 11135688999999988753
No 77
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=38.03 E-value=21 Score=39.00 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=21.1
Q ss_pred ccCeEEEEeeChhhHHHHhhhHHHH
Q 013734 202 NAQNAVLSGCSAGGLTSILHCDNFR 226 (437)
Q Consensus 202 ~a~~vlLsG~SAGGlga~l~~d~vr 226 (437)
+++++||||-|+|.+||+++...+.
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLS 379 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCC
Confidence 5678999999999999999876543
No 78
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=37.48 E-value=50 Score=30.05 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=16.8
Q ss_pred cCeEEEEeeChhhHHHHhhhH
Q 013734 203 AQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d 223 (437)
.++++|.|.|.||.-++..+.
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CCcEEEEEechhHHHHHHHHH
Confidence 467999999999987776544
No 79
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=36.75 E-value=83 Score=32.41 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCC-CCcEEEEeecccccccCCCCCchhHHHHHHHHH
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP-VGTKVKCFADAGYFINAKDVSGASHIEQFYAQV 263 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp-~~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~v 263 (437)
.-+++.++.|++ ..+ --+|+++|+|.||-=|.+-+.++...-. ...+|+++.=++ +-.|+....+.++..
T Consensus 155 ~~~~~~~~~L~~-~~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~------PRvGn~~fa~~~d~~ 225 (336)
T KOG4569|consen 155 SGLDAELRRLIE-LYP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ------PRVGNLAFAEWHDEL 225 (336)
T ss_pred HHHHHHHHHHHH-hcC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC------CCcccHHHHHHHHhh
Confidence 346677777775 344 4579999999999777777777765543 234566665443 334555555555543
No 80
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=36.51 E-value=56 Score=31.35 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=22.2
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccc
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 242 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG 242 (437)
.++++|.|.|.||.=++.-+- ..|..++-.++.++.
T Consensus 90 ~~~~~LvG~S~GG~va~~~a~----~~p~~v~~lvl~~~~ 125 (276)
T TIGR02240 90 YGQVNAIGVSWGGALAQQFAH----DYPERCKKLILAATA 125 (276)
T ss_pred cCceEEEEECHHHHHHHHHHH----HCHHHhhheEEeccC
Confidence 457999999999987765443 333333334444543
No 81
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=36.41 E-value=46 Score=36.26 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
..-+.++|+||..+...+ .+|.+.|.|.||.-+++-+
T Consensus 79 ~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred chHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHh
Confidence 345789999998754444 6899999999998766543
No 82
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=36.24 E-value=40 Score=35.98 Aligned_cols=30 Identities=27% Similarity=0.622 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
|++.|.++|+.- + +++|+|||++-+.+.+.
T Consensus 91 VLkaL~E~gl~p-~--vIsGTSaGAivAal~as 120 (421)
T cd07230 91 VLKALFEANLLP-R--IISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHcCCCC-C--EEEEECHHHHHHHHHHc
Confidence 567777777753 2 79999999988766553
No 83
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=36.03 E-value=70 Score=28.59 Aligned_cols=50 Identities=18% Similarity=0.226 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccccc
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 244 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~f 244 (437)
++.+.+++.+. +. +++.|.|.|.||.-++.-+. ..|..++-.++.+++..
T Consensus 52 ~~~~~~~~~~~-~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 52 LADAAEAIAAQ-AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHHHh-CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCcc
Confidence 45566666642 22 68999999999987765443 23432333344455443
No 84
>PLN02571 triacylglycerol lipase
Probab=35.38 E-value=71 Score=34.25 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=20.6
Q ss_pred eEEEEeeChhhHHHHhhhHHHHhh
Q 013734 205 NAVLSGCSAGGLTSILHCDNFRAL 228 (437)
Q Consensus 205 ~vlLsG~SAGGlga~l~~d~vr~~ 228 (437)
+|+++|+|-||.=|.+.+.+++..
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHHh
Confidence 699999999998888888887653
No 85
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=34.55 E-value=2e+02 Score=29.36 Aligned_cols=128 Identities=15% Similarity=0.164 Sum_probs=65.4
Q ss_pred CCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEE--ecCCCCccCCCcc
Q 013734 97 GINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV--RYCDGASFTGDVE 172 (437)
Q Consensus 97 gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~~~~~~~~~~Gils~~~~~NP~F~--nwN~V~V--pYCdGd~~~G~~~ 172 (437)
..+-++|.|+||=-|-+..--. ...|--. +...+ ...-..||+=+ ..|+||| |=-+|-|+.-+..
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f----~e~GP~~-----~~~~~--~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~ 106 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLF----GENGPFR-----INPDG--PYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPS 106 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHH----CTTSSEE-----EETTS--TSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGG
T ss_pred CCccEEEEecCCceeccccccc----cccCceE-----Eeecc--cccccccccccccccceEEEeecCceEEeeccccc
Confidence 4578999999996576653222 1223111 11000 01124455222 3578999 5556666554433
Q ss_pred cccCCCceeeehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHhhhHHHHhhCCC----CcEEEEee
Q 013734 173 AVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFPV----GTKVKCFA 239 (437)
Q Consensus 173 ~~~~~~~l~frG~~i~~avl~~L~~~gl~--~a~~vlLsG~SAGGlga~l~~d~vr~~lp~----~~~V~~l~ 239 (437)
. + ..+.---...+.+ .|...+.+ ++ +...+.|+|.|-||.=+..-+.+|.+.-.+ ..++++|.
T Consensus 107 ~-~-~~~~~~~a~~~~~-fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 107 D-Y-VWNDDQAAEDLYE-FLQQFFQK-FPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp G-G-S-SHHHHHHHHHH-HHHHHHHH-SGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred c-c-cchhhHHHHHHHH-HHHHhhhh-hhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 1 0 0111112223333 33333333 43 334799999999999888888888877643 46777765
No 86
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=34.37 E-value=30 Score=30.21 Aligned_cols=19 Identities=42% Similarity=0.461 Sum_probs=14.1
Q ss_pred eEEEEeeChhhHHHHhhhH
Q 013734 205 NAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 205 ~vlLsG~SAGGlga~l~~d 223 (437)
--+++|.||||+-+.+.+-
T Consensus 28 ~d~i~GtS~Gal~a~~~~~ 46 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLAL 46 (204)
T ss_dssp -SEEEEECCHHHHHHHHHT
T ss_pred ccEEEEcChhhhhHHHHHh
Confidence 3469999999998855443
No 87
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=33.82 E-value=1.1e+02 Score=32.13 Aligned_cols=22 Identities=27% Similarity=0.262 Sum_probs=17.2
Q ss_pred cCeEEEEeeChhhHHHHhhhHH
Q 013734 203 AQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~ 224 (437)
.++++|.|+|.||+-++..+-.
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK 196 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 3579999999999987765543
No 88
>PRK15231 fimbrial adhesin protein SefD; Provisional
Probab=33.79 E-value=60 Score=29.98 Aligned_cols=62 Identities=15% Similarity=0.164 Sum_probs=39.6
Q ss_pred CCCCeEEEecCCCCCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc
Q 013734 83 GSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY 152 (437)
Q Consensus 83 GSp~~yy~~~g~g~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~~~~~~~~~~Gils~~~~~NP~F~ 152 (437)
|-.|+.|+-.|.....+++-|=++|.||=-|. ..+ |-++.-.+...|.=+.+.++..+||-|
T Consensus 78 gg~P~~YIvqGk~dsqh~LrVRlgGeGWqPd~---~g~-----Giv~~~~eqa~FDVv~DGnQ~V~pD~Y 139 (150)
T PRK15231 78 KNTPGAYIIRGQNNSAHKLRIRIGGEDWQPDN---SGI-----GMVSHSDFTNEFNIYYFGNGDIPVDTY 139 (150)
T ss_pred CCCccEEEEECCCCCcceEEEEecCCCccCCC---CCC-----ceEeecccceeEEEEEeCCeecCCCeE
Confidence 44556666555555678999999999998776 222 211212344556666677787777644
No 89
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=33.60 E-value=56 Score=29.65 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
---+++.|.++++. . =+++|.|||++-+.+.+
T Consensus 15 ~~Gvl~~L~~~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 15 HIGVLKALEEAGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHHcCCC-e--eEEEEECHHHHHHHHHH
Confidence 34567777776653 3 48999999999876655
No 90
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=32.96 E-value=51 Score=31.76 Aligned_cols=30 Identities=30% Similarity=0.531 Sum_probs=21.6
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 190 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 190 avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
-|++.|.++|++ . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLEMGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHHcCCC-c--eEEEEeCHHHHHHHHHH
Confidence 356667666653 2 36999999999876655
No 91
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=32.83 E-value=59 Score=29.71 Aligned_cols=29 Identities=28% Similarity=0.516 Sum_probs=20.0
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHhh
Q 013734 190 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 190 avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~ 221 (437)
-+++.|.++|+. -=+++|.|||++-+.+.
T Consensus 17 Gvl~~L~e~g~~---~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 17 GVLRALEEEGIE---IDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHHHHCCCC---eeEEEEeCHHHHHHHHH
Confidence 356666666653 35899999999955443
No 92
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=32.69 E-value=76 Score=34.13 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
.+++.++.+.++ ...++|+|.|+|+||+=+....
T Consensus 147 ~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 147 GLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHH
Confidence 345555555432 2357899999999998877543
No 93
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=32.30 E-value=5.4e+02 Score=27.74 Aligned_cols=52 Identities=12% Similarity=0.073 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCc--cCeEEEEeeChhhHHHHhhhHHHHhhCCC----CcEEEEee
Q 013734 187 VFQAVMEDLMAKGMKN--AQNAVLSGCSAGGLTSILHCDNFRALFPV----GTKVKCFA 239 (437)
Q Consensus 187 i~~avl~~L~~~gl~~--a~~vlLsG~SAGGlga~l~~d~vr~~lp~----~~~V~~l~ 239 (437)
.+.++|+..+++ ++. -..+.|+|.|.||.=+...+.+|.+.=.+ ..+++.|.
T Consensus 153 d~~~~l~~f~~~-~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~ 210 (462)
T PTZ00472 153 DMYNFLQAFFGS-HEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLA 210 (462)
T ss_pred HHHHHHHHHHHh-CccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEE
Confidence 344444444432 333 36899999999998877777777643211 24556554
No 94
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=32.19 E-value=48 Score=33.35 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=22.2
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
|++.|.+.| -+--+++|+|||++-+.+.+.
T Consensus 29 Vl~aL~e~g---i~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAG---IPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcC---CCccEEEecCHHHHHHHHHHc
Confidence 567777655 455689999999987666554
No 95
>PLN00413 triacylglycerol lipase
Probab=31.67 E-value=69 Score=34.98 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=25.0
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHh
Q 013734 190 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 227 (437)
Q Consensus 190 avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~ 227 (437)
..++++++ ..+++ +|+++|+|.||-=|.+.+..++.
T Consensus 272 ~~Lk~ll~-~~p~~-kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 272 RHLKEIFD-QNPTS-KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHH-HCCCC-eEEEEecCHHHHHHHHHHHHHHh
Confidence 34444543 23433 69999999999888888877664
No 96
>KOG3101 consensus Esterase D [General function prediction only]
Probab=31.40 E-value=19 Score=35.67 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHH----hCCC-ccCeEEEEeeChhhHHHHh
Q 013734 186 RVFQAVMEDLMA----KGMK-NAQNAVLSGCSAGGLTSIL 220 (437)
Q Consensus 186 ~i~~avl~~L~~----~gl~-~a~~vlLsG~SAGGlga~l 220 (437)
|...-|.++|.+ ..++ .+.++-++|+|+||.||+.
T Consensus 118 rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~ 157 (283)
T KOG3101|consen 118 RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALT 157 (283)
T ss_pred hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEE
Confidence 344445555553 2333 4556889999999999875
No 97
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=31.13 E-value=42 Score=32.06 Aligned_cols=46 Identities=17% Similarity=0.292 Sum_probs=30.2
Q ss_pred ceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHH
Q 013734 179 NLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 225 (437)
Q Consensus 179 ~l~frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~v 225 (437)
.+.-.|.+..+++++.+... -....++.+.|+|.||+=+-.-.-..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~-~~~~~~IsfIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDY-ESKIRKISFIGHSLGGLIARYALGLL 99 (217)
T ss_pred hhHHHHHHHHHHHHHhcccc-ccccccceEEEecccHHHHHHHHHHh
Confidence 34556777777777776642 12246899999999998654433333
No 98
>PRK04940 hypothetical protein; Provisional
Probab=31.00 E-value=80 Score=30.04 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=18.2
Q ss_pred CeEEEEeeChhhHHHHhhhHHHHhhCC
Q 013734 204 QNAVLSGCSAGGLTSILHCDNFRALFP 230 (437)
Q Consensus 204 ~~vlLsG~SAGGlga~l~~d~vr~~lp 230 (437)
+.++|.|+|-|| +++-++..++.
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 569999999999 56667777664
No 99
>PRK00870 haloalkane dehalogenase; Provisional
Probab=30.71 E-value=1.5e+02 Score=28.92 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=23.7
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccc
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGY 243 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~ 243 (437)
.++++|.|+|.||.=++.-+. ..|..++-.++.+++.
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a~----~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLAA----EHPDRFARLVVANTGL 150 (302)
T ss_pred CCCEEEEEEChHHHHHHHHHH----hChhheeEEEEeCCCC
Confidence 357999999999976664443 3454444445556654
No 100
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=30.63 E-value=1.3e+02 Score=28.97 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=22.1
Q ss_pred CeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecc
Q 013734 204 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 241 (437)
Q Consensus 204 ~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DS 241 (437)
++++|.|.|.||.-++..+- ..|+.++-.++.++
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~----~~p~~v~~lili~~ 135 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAV----DAPELVRGVMLINI 135 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHH----hChhheeEEEEECC
Confidence 78999999999987765443 34443333444454
No 101
>COG0627 Predicted esterase [General function prediction only]
Probab=30.56 E-value=1.5e+02 Score=30.50 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=25.5
Q ss_pred eEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccccc
Q 013734 205 NAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 244 (437)
Q Consensus 205 ~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~f 244 (437)
+--++|.|.||.||+..+-+--++++ .+.+.||+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~-----~~sS~Sg~~ 187 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFK-----SASSFSGIL 187 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhc-----eeccccccc
Confidence 78899999999999985544444443 555677754
No 102
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=30.35 E-value=17 Score=33.71 Aligned_cols=15 Identities=40% Similarity=0.755 Sum_probs=10.4
Q ss_pred hhhHhhhhhhheeeh
Q 013734 5 CASLLFYYPYFYWYV 19 (437)
Q Consensus 5 ~~~~~~~~~~~~~~~ 19 (437)
++.+++|-|||.|+.
T Consensus 49 ~~~lm~~spy~G~~s 63 (155)
T PF10777_consen 49 VAALMYYSPYFGLGS 63 (155)
T ss_pred HHHHHHhcchhhhHH
Confidence 566778888885543
No 103
>PLN02719 triacylglycerol lipase
Probab=29.43 E-value=95 Score=34.25 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=22.9
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhh
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRAL 228 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~ 228 (437)
..+|+++|+|-||-=|.+.+.+++..
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHh
Confidence 35899999999999999999888875
No 104
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=29.20 E-value=35 Score=35.76 Aligned_cols=42 Identities=33% Similarity=0.408 Sum_probs=27.7
Q ss_pred CCceeeehHHHHHHHHHHHHH--hCC---------------C---ccCeEEEEeeChhhHHHH
Q 013734 177 ANNLHFRGARVFQAVMEDLMA--KGM---------------K---NAQNAVLSGCSAGGLTSI 219 (437)
Q Consensus 177 ~~~l~frG~~i~~avl~~L~~--~gl---------------~---~a~~vlLsG~SAGGlga~ 219 (437)
+.++.+|=.. +..+++.|.. .|- + +.++|.++|+|-||-.++
T Consensus 182 ~~QL~~R~~E-i~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 182 NAQLRQRVAE-IQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATAL 243 (379)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHH
Confidence 4567777665 4456665553 121 0 256899999999998887
No 105
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=29.18 E-value=89 Score=27.93 Aligned_cols=21 Identities=33% Similarity=0.396 Sum_probs=16.5
Q ss_pred cCeEEEEeeChhhHHHHhhhH
Q 013734 203 AQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d 223 (437)
.+++.|.|.|.||.-++..+.
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred CCceEEEEeCchHHHHHHHHH
Confidence 367999999999987765543
No 106
>PF04631 Baculo_44: Baculovirus hypothetical protein; InterPro: IPR006725 This family includes several hypothetical baculoviral proteins, with predicted molecular weights of approximately 44 kDa.
Probab=29.12 E-value=33 Score=35.92 Aligned_cols=50 Identities=20% Similarity=0.462 Sum_probs=35.6
Q ss_pred CCccCCCCCCeEEEecCCCCCCCcEEE---EecccccccCc---hhhhcccCCCCCCcccc
Q 013734 77 GAVCLDGSPPAYHFDKGFGAGINNWLV---HIEGGGWCNNV---TTCLERKKTRLGSSKQM 131 (437)
Q Consensus 77 gA~ClDGSp~~yy~~~g~g~gs~kwlI---~leGGG~C~~~---~tC~~r~~t~lGSS~~~ 131 (437)
.++|.|.|...||+.+. +|++| .|.-||||... ..|......-+.|...|
T Consensus 94 t~iC~n~sA~yf~V~~~-----dkfvvng~~L~~GgYCttnsvPrnCNreTSvvl~slNqW 149 (371)
T PF04631_consen 94 TSICDNPSAVYFFVGEH-----DKFVVNGQRLSPGGYCTTNSVPRNCNRETSVVLHSLNQW 149 (371)
T ss_pred hhhcCCCcceEEEecCC-----ceEEEcCcCccCCccccCCCcccccCccceEEEEcCCcE
Confidence 46899999888888765 56776 58899999753 47884333335666666
No 107
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=28.67 E-value=56 Score=29.36 Aligned_cols=11 Identities=45% Similarity=0.773 Sum_probs=9.6
Q ss_pred EEEEeeChhhH
Q 013734 206 AVLSGCSAGGL 216 (437)
Q Consensus 206 vlLsG~SAGGl 216 (437)
+++.|.|||+.
T Consensus 70 ~vi~G~SAGA~ 80 (154)
T PF03575_consen 70 GVIIGTSAGAM 80 (154)
T ss_dssp SEEEEETHHHH
T ss_pred CEEEEEChHHh
Confidence 78999999993
No 108
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.61 E-value=63 Score=30.77 Aligned_cols=29 Identities=28% Similarity=0.547 Sum_probs=20.8
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
|++.|.++|. .--+++|.|||++-+.+.+
T Consensus 16 vl~aL~e~g~---~~d~i~GtS~GAl~aa~~a 44 (215)
T cd07209 16 VLKALAEAGI---EPDIISGTSIGAINGALIA 44 (215)
T ss_pred HHHHHHHcCC---CCCEEEEECHHHHHHHHHH
Confidence 5677777666 3448999999998655543
No 109
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=28.53 E-value=79 Score=28.54 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
---|++.|.++++.+ .--.++|.|||++-+...+
T Consensus 13 ~~gvl~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 13 HAGVLSALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 334667777666642 3457899999999888877
No 110
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=28.30 E-value=3.4e+02 Score=29.50 Aligned_cols=143 Identities=13% Similarity=0.133 Sum_probs=86.9
Q ss_pred CCCCeEEEecCCC-CCCCcEEEEecccccccCchhhhcccCCCCCCccccccccccccccCCCCCCCcCcc--cccEEEE
Q 013734 83 GSPPAYHFDKGFG-AGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV 159 (437)
Q Consensus 83 GSp~~yy~~~g~g-~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~~~~~~~~~~Gils~~~~~NP~F~--nwN~V~V 159 (437)
|..--|||-+.-. ..++-+||.|.||=-|-+..- ....+|-.. +...|- .-..||.=+ ..|++||
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G----~~~E~GPf~-----v~~~G~---tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGG----LFEENGPFR-----VKYNGK---TLYLNPYSWNKEANILFL 123 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchhh----hhhhcCCeE-----EcCCCC---cceeCCccccccccEEEE
Confidence 5555677655521 123559999999998887641 223344211 112222 355677222 3467787
Q ss_pred --ecCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHhhhHHHHhhCC----C
Q 013734 160 --RYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFP----V 231 (437)
Q Consensus 160 --pYCdGd~~~G~~~~~~~~~~l~frG~~i~~avl~~L~~~gl~--~a~~vlLsG~SAGGlga~l~~d~vr~~lp----~ 231 (437)
|==+|-|++.+... + ...-.-...++..+.++|+.. ++ +-....++|.|-+|.=+..-++.|.+.=. .
T Consensus 124 d~PvGvGFSYs~~~~~-~-~~~D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~ 199 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSD-Y-KTGDDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKP 199 (454)
T ss_pred ecCCcCCccccCCCCc-C-cCCcHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehHHHHHHHHhccccccCC
Confidence 66666666665431 1 122333458899999999984 44 34679999999999888887788776532 1
Q ss_pred CcEEEEeecc
Q 013734 232 GTKVKCFADA 241 (437)
Q Consensus 232 ~~~V~~l~DS 241 (437)
..++++++=.
T Consensus 200 ~iNLkG~~IG 209 (454)
T KOG1282|consen 200 NINLKGYAIG 209 (454)
T ss_pred cccceEEEec
Confidence 3566666543
No 111
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=28.06 E-value=68 Score=34.34 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHH
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSI 219 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~ 219 (437)
+-+++|||+|.+..-=+.++|.+.|-|.||.-++
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~Av 276 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAV 276 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHH
Confidence 4678999999864334778999999999997765
No 112
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=28.01 E-value=97 Score=31.34 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=24.4
Q ss_pred CccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeec
Q 013734 201 KNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFAD 240 (437)
Q Consensus 201 ~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~D 240 (437)
.+.++|+|+|. |+.+..+.+++.+|+ +++..+.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~~-~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFPK-HRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCCC-CeeEecCC
Confidence 35788999874 344668999999996 55555555
No 113
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=27.97 E-value=1.4e+02 Score=30.63 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=40.5
Q ss_pred ceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCC-cEEEEeecccc
Q 013734 179 NLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVG-TKVKCFADAGY 243 (437)
Q Consensus 179 ~l~frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~-~~V~~l~DSG~ 243 (437)
.++.....-.-+...+|.+ +.=++.|.|.|+ ++.-+-.+++.++++ .-|.+++|+|.
T Consensus 238 ~v~~V~d~~A~~~~r~La~------~eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 238 EVIRVSDEEAIATARRLAR------EEGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred eEEEECHHHHHHHHHHHHH------HhCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 5566666666677777775 356788888886 555567888888754 45788899984
No 114
>PLN02162 triacylglycerol lipase
Probab=27.84 E-value=95 Score=33.87 Aligned_cols=125 Identities=18% Similarity=0.188 Sum_probs=59.9
Q ss_pred CcEEEEecccccccCchhhhcccCCCCCCcc-cccc--ccccccccCCCCCCCcCcccccEEEEecCC-CCccCCCccc-
Q 013734 99 NNWLVHIEGGGWCNNVTTCLERKKTRLGSSK-QMVK--VVAFSGMLSNKQKFNPDFYNWNRIKVRYCD-GASFTGDVEA- 173 (437)
Q Consensus 99 ~kwlI~leGGG~C~~~~tC~~r~~t~lGSS~-~~~~--~~~~~Gils~~~~~NP~F~nwN~V~VpYCd-Gd~~~G~~~~- 173 (437)
+.|=.+|-|+=-||+.-.=...........+ .-++ .+.|.|--+.+.. | -..|.+...+++|+ |-+|.|-...
T Consensus 163 ~~w~m~~v~~y~~wn~~~~~~~TQafv~~d~~~d~~~IVVAFRGT~~~~~~-D-WiTDld~s~~~~~~~GkVH~GF~~A~ 240 (475)
T PLN02162 163 NTWKMDLVGNYDFYNAFQESKLTQAFVFKTSSTNPDLIVVSFRGTEPFEAA-D-WCTDLDLSWYELKNVGKVHAGFSRAL 240 (475)
T ss_pred HhcCccccchhhhhhhhhhhcccceEEEEeccCCCceEEEEEccCCCCcHH-H-HHhhcCcceecCCCCeeeeHHHHHHH
Confidence 6788999999889985432221111111100 0011 1233443211111 1 12344455666664 6677773321
Q ss_pred ---cc---CCCceeeehHHH---HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHh
Q 013734 174 ---VN---PANNLHFRGARV---FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 227 (437)
Q Consensus 174 ---~~---~~~~l~frG~~i---~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~ 227 (437)
.+ +....-.+.... +++.+++++.+ .+ -.+++++|+|-||-=|.+.+..++.
T Consensus 241 ~~~~~~~~p~~~~~~~~~~ay~~I~~~L~~lL~k-~p-~~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 241 GLQKDGGWPKENISLLHQYAYYTIRQMLRDKLAR-NK-NLKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HhhhcccccccccchhhhhhHHHHHHHHHHHHHh-CC-CceEEEEecChHHHHHHHHHHHHHH
Confidence 00 000111111222 33334444432 23 3479999999999888888777764
No 115
>PLN02753 triacylglycerol lipase
Probab=27.52 E-value=1.2e+02 Score=33.67 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=35.1
Q ss_pred cCeEEEEeeChhhHHHHhhhHHHHhh-CCC-----CcEEEEeecccccccCCCCCchhHHHHHHHH
Q 013734 203 AQNAVLSGCSAGGLTSILHCDNFRAL-FPV-----GTKVKCFADAGYFINAKDVSGASHIEQFYAQ 262 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d~vr~~-lp~-----~~~V~~l~DSG~fld~~~~~g~~~~~~~~~~ 262 (437)
..+|+++|+|-||-=|.+.+.+++.. +++ ...|.++.=++. --|+....++++.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsP------RVGN~aFA~~~~~ 370 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGP------RVGNVRFKDRMEE 370 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCC------CccCHHHHHHHHh
Confidence 46899999999999999999888764 321 233555554432 2355555555543
No 116
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=27.26 E-value=74 Score=32.62 Aligned_cols=30 Identities=30% Similarity=0.465 Sum_probs=21.7
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
|++.|.++|+.- + +++|.|||++-+.+.+-
T Consensus 87 vl~aL~e~~l~~-~--~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 87 VVKALWEQDLLP-R--VISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHcCCCC-C--EEEEEcHHHHHHHHHHc
Confidence 456666666642 2 69999999998877664
No 117
>PLN02847 triacylglycerol lipase
Probab=26.99 E-value=1.5e+02 Score=33.55 Aligned_cols=24 Identities=29% Similarity=0.253 Sum_probs=18.7
Q ss_pred CeEEEEeeChhhHHHHhhhHHHHh
Q 013734 204 QNAVLSGCSAGGLTSILHCDNFRA 227 (437)
Q Consensus 204 ~~vlLsG~SAGGlga~l~~d~vr~ 227 (437)
-+++++|+|-||-=|.+-+-.+|+
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhc
Confidence 379999999998666665767775
No 118
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=26.96 E-value=67 Score=32.68 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=23.8
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHH
Q 013734 190 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 190 avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~ 224 (437)
-||+.|.++|++ --+++|+|||++=+.+.+-.
T Consensus 32 GvL~aLee~gi~---~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 32 GVIKALEEAGIP---VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHcC
Confidence 367777777775 35899999999877766543
No 119
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.29 E-value=72 Score=31.12 Aligned_cols=31 Identities=23% Similarity=0.454 Sum_probs=21.9
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHhh
Q 013734 189 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 221 (437)
Q Consensus 189 ~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~ 221 (437)
--|++.|.++++. +==+++|.|||++=+.+.
T Consensus 14 ~Gvl~al~e~~~~--~fd~i~GtSaGAi~a~~~ 44 (266)
T cd07208 14 AGVLDAFLEAGIR--PFDLVIGVSAGALNAASY 44 (266)
T ss_pred HHHHHHHHHcCCC--CCCEEEEECHHHHhHHHH
Confidence 3466777777765 233899999999876654
No 120
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=25.88 E-value=81 Score=32.74 Aligned_cols=31 Identities=19% Similarity=0.395 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~ 224 (437)
|++-|.++|+.- -+++|+|||++-+.+.+-+
T Consensus 86 VlkaL~e~gl~p---~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 86 VVRTLVEHQLLP---RVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred HHHHHHHcCCCC---CEEEEECHHHHHHHHHHcC
Confidence 456666677743 2599999999987776543
No 121
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=25.71 E-value=1.2e+02 Score=31.21 Aligned_cols=56 Identities=16% Similarity=0.225 Sum_probs=38.7
Q ss_pred HHHHHHHHH-hCCCccCeEEEEeeChhhHHHHhhhHHHHh--hCCCCcEEEEeecccccccCC
Q 013734 189 QAVMEDLMA-KGMKNAQNAVLSGCSAGGLTSILHCDNFRA--LFPVGTKVKCFADAGYFINAK 248 (437)
Q Consensus 189 ~avl~~L~~-~gl~~a~~vlLsG~SAGGlga~l~~d~vr~--~lp~~~~V~~l~DSG~fld~~ 248 (437)
...|+.|.. .|+ ..++|-|.|+|-||--+-+-..++.. +++ +|.+|.=||..+...
T Consensus 135 a~~l~~L~~~~g~-~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~---rItgLDPAgP~F~~~ 193 (331)
T PF00151_consen 135 AKFLSFLINNFGV-PPENIHLIGHSLGAHVAGFAGKYLKGGGKIG---RITGLDPAGPLFENN 193 (331)
T ss_dssp HHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT---SS---EEEEES-B-TTTTTS
T ss_pred HHHHHHHHhhcCC-ChhHEEEEeeccchhhhhhhhhhccCcceee---EEEecCcccccccCC
Confidence 344556663 344 47889999999999988888888887 553 689999899887654
No 122
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=25.61 E-value=1.9e+02 Score=27.46 Aligned_cols=49 Identities=14% Similarity=0.304 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHHh--CCCccCeEEEEeeChhhHHH---HhhhHHHHhhCCCC
Q 013734 184 GARVFQAVMEDLMAK--GMKNAQNAVLSGCSAGGLTS---ILHCDNFRALFPVG 232 (437)
Q Consensus 184 G~~i~~avl~~L~~~--gl~~a~~vlLsG~SAGGlga---~l~~d~vr~~lp~~ 232 (437)
|...++.+++.+.+. ..+..+-++|.-+-+||.|+ .+-++.+|+.+|..
T Consensus 103 ~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~ 156 (216)
T PF00091_consen 103 GEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKK 156 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTS
T ss_pred ccccccccccccchhhccccccccceecccccceeccccccccchhhhcccccc
Confidence 444788888887752 34889999999888888774 56688899999853
No 123
>PRK10749 lysophospholipase L2; Provisional
Probab=25.15 E-value=2e+02 Score=28.72 Aligned_cols=21 Identities=19% Similarity=0.126 Sum_probs=16.9
Q ss_pred cCeEEEEeeChhhHHHHhhhH
Q 013734 203 AQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d 223 (437)
.+++.|.|+|.||.-+...+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 467999999999987765554
No 124
>PLN02934 triacylglycerol lipase
Probab=24.84 E-value=1.3e+02 Score=33.19 Aligned_cols=38 Identities=26% Similarity=0.381 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHh
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 227 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~ 227 (437)
++..+++++++ .++ .+++++|+|-||-=|.+.+..++.
T Consensus 307 v~~~lk~ll~~-~p~-~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 307 VRSKLKSLLKE-HKN-AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHH-CCC-CeEEEeccccHHHHHHHHHHHHHH
Confidence 55556666653 344 469999999999888887766653
No 125
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=24.63 E-value=99 Score=29.29 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=18.5
Q ss_pred ccCeEEEEeeChhhHHHHhhhHH
Q 013734 202 NAQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 202 ~a~~vlLsG~SAGGlga~l~~d~ 224 (437)
..+++.|.|+|.||.-++..+..
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHh
Confidence 44689999999999988876653
No 126
>PRK10279 hypothetical protein; Provisional
Probab=24.54 E-value=80 Score=32.15 Aligned_cols=29 Identities=28% Similarity=0.545 Sum_probs=22.3
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
||+.|.+.|++ --+++|+|||++-+.+.+
T Consensus 23 VL~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 23 VINALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 56777777775 368999999998766655
No 127
>PLN02872 triacylglycerol lipase
Probab=24.23 E-value=1.2e+02 Score=31.97 Aligned_cols=38 Identities=11% Similarity=0.123 Sum_probs=28.6
Q ss_pred eeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHh
Q 013734 180 LHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 220 (437)
Q Consensus 180 l~frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l 220 (437)
++-.+..-+.|+++++++. . .+++.+.|+|.||.-++.
T Consensus 139 ~~e~a~~Dl~a~id~i~~~--~-~~~v~~VGhS~Gg~~~~~ 176 (395)
T PLN02872 139 WQELALYDLAEMIHYVYSI--T-NSKIFIVGHSQGTIMSLA 176 (395)
T ss_pred HHHHHHHHHHHHHHHHHhc--c-CCceEEEEECHHHHHHHH
Confidence 3444556789999999853 2 368999999999987653
No 128
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=23.93 E-value=1.4e+02 Score=30.70 Aligned_cols=44 Identities=34% Similarity=0.446 Sum_probs=29.8
Q ss_pred eeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCC
Q 013734 180 LHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 230 (437)
Q Consensus 180 l~frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp 230 (437)
..=+|..+.+-|-+-|. ...|+++.|.|+|+||.-+. ++...++
T Consensus 106 ~~~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 34455655555544444 35679999999999998887 5555555
No 129
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=23.68 E-value=93 Score=28.25 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=32.0
Q ss_pred cCCCCccCCCcccccCCCceeeehHHHHHHHHHHHHHhCCCccCeEEEEeeChh
Q 013734 161 YCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAG 214 (437)
Q Consensus 161 YCdGd~~~G~~~~~~~~~~l~frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAG 214 (437)
|+-+|.|.|..........-+-+-....+++++.+.+ .+++++.|+++|--..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~d~vi~~GDl~~ 54 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNE-TVGPDDTVYHLGDFSF 54 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhh-hcCCCCEEEEeCCCCC
Confidence 6778999997542111000001112244677777775 5788999999996543
No 130
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.48 E-value=1.7e+02 Score=34.10 Aligned_cols=19 Identities=26% Similarity=0.483 Sum_probs=15.9
Q ss_pred CCccCeEEEEeeChhhHHH
Q 013734 200 MKNAQNAVLSGCSAGGLTS 218 (437)
Q Consensus 200 l~~a~~vlLsG~SAGGlga 218 (437)
.+.++.|+|.|+|.||+=|
T Consensus 178 ~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 178 SPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred CCCCceEEEEeccchhHHH
Confidence 3568899999999999754
No 131
>PRK11071 esterase YqiA; Provisional
Probab=23.29 E-value=1.6e+02 Score=27.39 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
.+.+.+++++++ ++ .++++|.|+|.||.=++.-+
T Consensus 46 ~~~~~l~~l~~~-~~-~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 46 DAAELLESLVLE-HG-GDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred HHHHHHHHHHHH-cC-CCCeEEEEECHHHHHHHHHH
Confidence 355566666652 32 35799999999998776544
No 132
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=22.98 E-value=3.3e+02 Score=25.26 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=29.9
Q ss_pred eehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHH
Q 013734 182 FRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 182 frG~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~ 224 (437)
..|..++...|++..++ =++ .+++|+|.|-|+.-+......
T Consensus 61 ~~G~~~~~~~i~~~~~~-CP~-~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAAR-CPN-TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHHH-STT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-CCC-CCEEEEecccccHHHHHHHHh
Confidence 35777888888887764 343 489999999999776555444
No 133
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=22.85 E-value=92 Score=29.50 Aligned_cols=26 Identities=19% Similarity=0.498 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeCh
Q 013734 188 FQAVMEDLMAKGMKNAQNAVLSGCSA 213 (437)
Q Consensus 188 ~~avl~~L~~~gl~~a~~vlLsG~SA 213 (437)
+++++++|+++.--++.++++-|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 67899999987666788999999995
No 134
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=22.71 E-value=1.6e+02 Score=29.62 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=24.2
Q ss_pred Ce-EEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeeccccc
Q 013734 204 QN-AVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 244 (437)
Q Consensus 204 ~~-vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~f 244 (437)
++ ++|.|.|.||.=++..+-. .|..++-.++.|++..
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSAR 163 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCc
Confidence 55 9999999999877765544 3433333455666544
No 135
>PLN02761 lipase class 3 family protein
Probab=22.54 E-value=1.6e+02 Score=32.55 Aligned_cols=25 Identities=16% Similarity=0.286 Sum_probs=21.7
Q ss_pred CeEEEEeeChhhHHHHhhhHHHHhh
Q 013734 204 QNAVLSGCSAGGLTSILHCDNFRAL 228 (437)
Q Consensus 204 ~~vlLsG~SAGGlga~l~~d~vr~~ 228 (437)
-+|+++|+|-||-=|.+.+.+++..
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~~ 318 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAEL 318 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHh
Confidence 4899999999998888888888753
No 136
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=22.41 E-value=80 Score=32.33 Aligned_cols=116 Identities=14% Similarity=0.156 Sum_probs=56.7
Q ss_pred CceeeehH-HHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCC-----
Q 013734 178 NNLHFRGA-RVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKD----- 249 (437)
Q Consensus 178 ~~l~frG~-~i~~avl~~L~~~gl~--~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~----- 249 (437)
.+.|||+- ......++.|. .++ ++++|.++|.|-||.=|++-+- |.+.++ .++++--++=|.+.
T Consensus 148 e~~yyr~~~~D~~ravd~l~--slpevD~~rI~v~G~SqGG~lal~~aa-----Ld~rv~-~~~~~vP~l~d~~~~~~~~ 219 (320)
T PF05448_consen 148 EDYYYRRVYLDAVRAVDFLR--SLPEVDGKRIGVTGGSQGGGLALAAAA-----LDPRVK-AAAADVPFLCDFRRALELR 219 (320)
T ss_dssp TT-HHHHHHHHHHHHHHHHH--TSTTEEEEEEEEEEETHHHHHHHHHHH-----HSST-S-EEEEESESSSSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH--hCCCcCcceEEEEeecCchHHHHHHHH-----hCcccc-EEEecCCCccchhhhhhcC
Confidence 46788874 33444456666 355 5789999999999976665433 222221 24445445544321
Q ss_pred --CCchhHHHHHHHHHHhhcCcCcccCcccccCCCCcccccchHHhhccCCCeeeeehhhh
Q 013734 250 --VSGASHIEQFYAQVVATHGSAKHLPASCTSRLSPGLCFFPQYMARQITTPLFIINAAYD 308 (437)
Q Consensus 250 --~~g~~~~~~~~~~v~~l~g~~~~lp~~C~~~~~~~~Cff~q~~~~~I~tPlFilns~YD 308 (437)
..+-..+..+++..- . .++.-.+-.+.-.=|=..+..+.|+.|+++--++.|
T Consensus 220 ~~~~~y~~~~~~~~~~d-~------~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D 273 (320)
T PF05448_consen 220 ADEGPYPEIRRYFRWRD-P------HHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQD 273 (320)
T ss_dssp --STTTHHHHHHHHHHS-C------THCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-
T ss_pred CccccHHHHHHHHhccC-C------CcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCC
Confidence 111122333333110 0 000000000111123356889999999999999998
No 137
>PRK10985 putative hydrolase; Provisional
Probab=22.15 E-value=1.4e+02 Score=29.90 Aligned_cols=35 Identities=14% Similarity=0.010 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
..+.++++++.++ ++ .+++++.|.|.||.=+....
T Consensus 115 ~D~~~~i~~l~~~-~~-~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 115 EDARFFLRWLQRE-FG-HVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred HHHHHHHHHHHHh-CC-CCCEEEEEecchHHHHHHHH
Confidence 4577788888763 33 35699999999996444433
No 138
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=21.99 E-value=2e+02 Score=29.64 Aligned_cols=27 Identities=11% Similarity=0.345 Sum_probs=21.0
Q ss_pred CCccCeEEEEeeChhhHHHHhhhHHHHhhCCC
Q 013734 200 MKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 231 (437)
Q Consensus 200 l~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~ 231 (437)
..+.++|+|+|.+|- +..+.+++.+|+
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~~ 315 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYSD 315 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcCC
Confidence 456788999997764 356999999985
No 139
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.96 E-value=1.3e+02 Score=29.94 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=23.5
Q ss_pred ehHHHHHHHHHHHHHhCCCcc-C-eEEEEeeChhhHHHHhhh
Q 013734 183 RGARVFQAVMEDLMAKGMKNA-Q-NAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 183 rG~~i~~avl~~L~~~gl~~a-~-~vlLsG~SAGGlga~l~~ 222 (437)
|| .+--.+|+.|.+++ ++. + ==+++|.||||+-+...+
T Consensus 13 RG-i~~~~vL~~Le~~~-~~~~~~fD~i~GTSaGaiia~~la 52 (288)
T cd07213 13 KG-IVQLVLLKRLAEEF-PSFLDQIDLFAGTSAGSLIALGLA 52 (288)
T ss_pred HH-HHHHHHHHHHHHhC-cccccceeEEEEeCHHHHHHHHHH
Confidence 45 33445677777653 221 1 237999999998776543
No 140
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=21.78 E-value=1e+02 Score=31.08 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhh
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~ 222 (437)
.+.+++++++++ ...+++.|.|.|.||.-++..+
T Consensus 121 ~~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 121 YIDKCVDYICRT--SKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHH
Confidence 467788888863 2457899999999998776543
No 141
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=21.68 E-value=2.6e+02 Score=25.62 Aligned_cols=21 Identities=24% Similarity=0.134 Sum_probs=16.6
Q ss_pred cCeEEEEeeChhhHHHHhhhH
Q 013734 203 AQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 203 a~~vlLsG~SAGGlga~l~~d 223 (437)
.++++|.|.|.||.=++..+.
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHH
Confidence 356999999999987776543
No 142
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=21.55 E-value=2.1e+02 Score=26.45 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
..|.+.|+.-+. .+ .+.++|.|+|.|.+.++.+..
T Consensus 40 ~~W~~~l~~~i~-~~--~~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 40 DEWVQALDQAID-AI--DEPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp HHHHHHHHHCCH-C---TTTEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHh
Confidence 345555554432 22 345999999999999998886
No 143
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=21.34 E-value=1.6e+02 Score=26.23 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHh
Q 013734 185 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 227 (437)
Q Consensus 185 ~~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~ 227 (437)
..-+.+.++.++++ ++..+ +.+.|.|.||.=++..+..--+
T Consensus 27 ~~~~~~~~~~~~~~-l~~~~-~~~vG~S~Gg~~~~~~a~~~p~ 67 (230)
T PF00561_consen 27 TDDLAADLEALREA-LGIKK-INLVGHSMGGMLALEYAAQYPE 67 (230)
T ss_dssp HHHHHHHHHHHHHH-HTTSS-EEEEEETHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHH-hCCCC-eEEEEECCChHHHHHHHHHCch
Confidence 34455556666642 33333 9999999999877766544333
No 144
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=21.29 E-value=37 Score=33.88 Aligned_cols=43 Identities=26% Similarity=0.246 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhC
Q 013734 187 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALF 229 (437)
Q Consensus 187 i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~l 229 (437)
--+++||+|..+-.-+-.+++|-|-|-||--|+.-+...++++
T Consensus 132 Ds~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri 174 (300)
T KOG4391|consen 132 DSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRI 174 (300)
T ss_pred cHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhhe
Confidence 3689999999865556678999999999966655555555443
No 145
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=21.23 E-value=1.8e+02 Score=30.54 Aligned_cols=50 Identities=24% Similarity=0.313 Sum_probs=32.5
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCc-EEEEee---cccccc
Q 013734 189 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGT-KVKCFA---DAGYFI 245 (437)
Q Consensus 189 ~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~-~V~~l~---DSG~fl 245 (437)
++.++||.++|.. ++-|+|-|.||. ++.-.....|+.+ .|-|++ .|..|.
T Consensus 163 ~~Ll~Wl~~~G~~---~~g~~G~SmGG~----~A~laa~~~p~pv~~vp~ls~~sAs~vFt 216 (348)
T PF09752_consen 163 RALLHWLEREGYG---PLGLTGISMGGH----MAALAASNWPRPVALVPCLSWSSASVVFT 216 (348)
T ss_pred HHHHHHHHhcCCC---ceEEEEechhHh----hHHhhhhcCCCceeEEEeecccCCCcchh
Confidence 4567888876554 799999999995 4555666677542 344443 334554
No 146
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=21.20 E-value=1.1e+02 Score=32.65 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=19.0
Q ss_pred HHHHHHHhCCCcc-CeEEEEeeChhhHHHHhhh
Q 013734 191 VMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 191 vl~~L~~~gl~~a-~~vlLsG~SAGGlga~l~~ 222 (437)
|++.|.+.+..-- .--.++|.|||++.+.+.+
T Consensus 30 Vl~aL~E~gp~ll~~~d~IaGtSAGALvAAl~a 62 (382)
T cd07219 30 VVDALRDLAPRMLETAHRVAGTSAGSVIAALVV 62 (382)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHHH
Confidence 4455555332110 1235899999999877654
No 147
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=21.06 E-value=99 Score=32.89 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 190 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 190 avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
-|++-|.++|+. ++ +++|.|||++-+.+.+-
T Consensus 84 GVlkaL~e~gll-p~--iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLL-PN--VISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCC-CC--EEEEECHHHHHHHHHHc
Confidence 466777777764 22 59999999998777664
No 148
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.02 E-value=1e+02 Score=30.44 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=20.2
Q ss_pred HHHHHHHhCCCcc-CeEEEEeeChhhHHHHhhh
Q 013734 191 VMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHC 222 (437)
Q Consensus 191 vl~~L~~~gl~~a-~~vlLsG~SAGGlga~l~~ 222 (437)
|++-|++++..-- +--.++|.|||++-+...+
T Consensus 18 Vl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSERAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHHhCcchhccCCEEEEEcHHHHHHHHHH
Confidence 4566665442211 1246899999999877664
No 149
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=20.92 E-value=1.3e+02 Score=31.52 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHHH
Q 013734 186 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 225 (437)
Q Consensus 186 ~i~~avl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~v 225 (437)
..+++.|+++..+ +-++|+|.|+|.||+=+..-....
T Consensus 104 ~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 104 TKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhc
Confidence 4567777776652 278999999999998876655554
No 150
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.73 E-value=61 Score=31.23 Aligned_cols=14 Identities=36% Similarity=0.859 Sum_probs=11.3
Q ss_pred eEEEEeeChhhHHH
Q 013734 205 NAVLSGCSAGGLTS 218 (437)
Q Consensus 205 ~vlLsG~SAGGlga 218 (437)
.-+++|||.||+=+
T Consensus 102 s~~~sgcsmGayhA 115 (227)
T COG4947 102 STIVSGCSMGAYHA 115 (227)
T ss_pred Cccccccchhhhhh
Confidence 37899999999544
No 151
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=20.67 E-value=1.1e+02 Score=32.56 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=21.1
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 223 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d 223 (437)
|++-|.++|+.-- +++|+|||++-+.+.+.
T Consensus 101 v~kaL~e~gl~p~---~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 101 VVKALWLRGLLPR---IITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHcCCCCc---eEEEecHHHHHHHHHHc
Confidence 4566666666422 59999999987666554
No 152
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=20.45 E-value=2.1e+02 Score=30.49 Aligned_cols=79 Identities=16% Similarity=0.227 Sum_probs=49.7
Q ss_pred CceeeehHHHHHHHHHHHHHhCCC-ccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCCCchhHH
Q 013734 178 NNLHFRGARVFQAVMEDLMAKGMK-NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHI 256 (437)
Q Consensus 178 ~~l~frG~~i~~avl~~L~~~gl~-~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~~g~~~~ 256 (437)
...-+.-..-.+||++.... .++ ..+.+||-|.|-||+-+. +.+..+|. ++ -++-|+-| =|.-.. .-..|
T Consensus 285 ~P~p~n~~nA~DaVvQfAI~-~Lgf~~edIilygWSIGGF~~~----waAs~YPd-Vk-avvLDAtF-DDllpL-Al~rM 355 (517)
T KOG1553|consen 285 LPYPVNTLNAADAVVQFAIQ-VLGFRQEDIILYGWSIGGFPVA----WAASNYPD-VK-AVVLDATF-DDLLPL-ALFRM 355 (517)
T ss_pred CCCcccchHHHHHHHHHHHH-HcCCCccceEEEEeecCCchHH----HHhhcCCC-ce-EEEeecch-hhhhhH-Hhhhc
Confidence 34455666778888888775 454 567899999999998765 55677883 43 22346643 222111 12345
Q ss_pred HHHHHHHHh
Q 013734 257 EQFYAQVVA 265 (437)
Q Consensus 257 ~~~~~~v~~ 265 (437)
+.+|.++|+
T Consensus 356 P~~~~giV~ 364 (517)
T KOG1553|consen 356 PTFFSGIVE 364 (517)
T ss_pred hHHHHHHHH
Confidence 678887764
No 153
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=20.39 E-value=1.1e+02 Score=30.64 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHhhhHH
Q 013734 191 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 224 (437)
Q Consensus 191 vl~~L~~~gl~~a~~vlLsG~SAGGlga~l~~d~ 224 (437)
||+.|.++|++ -=+++|.|||++-+.+.+-.
T Consensus 28 VL~aLeE~gi~---~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGIP---IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCCC---ccEEEEECHHHHHHHHHHcC
Confidence 56667666775 45799999999877666543
No 154
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=20.37 E-value=1.5e+02 Score=30.55 Aligned_cols=65 Identities=20% Similarity=0.229 Sum_probs=45.9
Q ss_pred eeehHHHHHHHHHHHHHh------CCCccCeEEEEeeChhhHHHHhhhHHHHhhCCCCcEEEEeecccccccCCCC
Q 013734 181 HFRGARVFQAVMEDLMAK------GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV 250 (437)
Q Consensus 181 ~frG~~i~~avl~~L~~~------gl~~a~~vlLsG~SAGGlga~l~~d~vr~~lp~~~~V~~l~DSG~fld~~~~ 250 (437)
+|.=..-++.+.++|++. -.+.|+.=+|+|.|-||+.+++-.-.-=++| =.+++=||.|.+.+..
T Consensus 148 ~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~F-----G~V~s~Sps~~~~~~~ 218 (299)
T COG2382 148 LHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERF-----GHVLSQSGSFWWTPLD 218 (299)
T ss_pred hcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhh-----ceeeccCCccccCccc
Confidence 335556688888888852 2356788899999999999887544333333 3677889988877654
Done!