Query 013736
Match_columns 437
No_of_seqs 219 out of 1801
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 06:52:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013736.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013736hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4567 GTPase-activating prot 100.0 6.9E-46 1.5E-50 345.1 25.4 310 45-416 11-362 (370)
2 KOG2058 Ypt/Rab GTPase activat 100.0 1.3E-42 2.9E-47 345.3 20.7 253 44-401 124-386 (436)
3 KOG1092 Ypt/Rab-specific GTPas 100.0 1.7E-40 3.7E-45 320.0 20.4 273 56-418 176-477 (484)
4 KOG2224 Uncharacterized conser 100.0 5.3E-40 1.2E-44 316.0 18.0 328 23-432 385-747 (781)
5 smart00164 TBC Domain in Tre-2 100.0 2.8E-39 6E-44 298.5 17.3 194 67-317 2-198 (199)
6 KOG2223 Uncharacterized conser 100.0 9.8E-36 2.1E-40 287.0 21.6 260 60-414 292-555 (586)
7 KOG2197 Ypt/Rab-specific GTPas 100.0 1.4E-35 3.1E-40 303.8 18.6 349 31-424 38-451 (488)
8 COG5210 GTPase-activating prot 100.0 4.3E-34 9.3E-39 298.1 20.5 254 41-396 181-441 (496)
9 PF00566 RabGAP-TBC: Rab-GTPas 100.0 1.9E-33 4.2E-38 261.8 22.2 169 167-381 46-214 (214)
10 KOG2222 Uncharacterized conser 100.0 2.3E-31 5E-36 259.1 17.5 253 57-413 158-417 (848)
11 KOG1093 Predicted protein kina 100.0 2.4E-30 5.2E-35 257.6 17.9 202 167-416 390-592 (725)
12 KOG1091 Ypt/Rab-specific GTPas 100.0 7.9E-30 1.7E-34 254.0 19.5 284 72-422 27-370 (625)
13 KOG4347 GTPase-activating prot 100.0 4.3E-29 9.3E-34 252.9 13.5 248 44-398 174-425 (671)
14 KOG2595 Predicted GTPase activ 100.0 4.6E-28 1E-32 228.5 15.8 205 168-420 97-306 (395)
15 KOG4436 Predicted GTPase activ 99.9 5.3E-27 1.1E-31 241.1 18.6 254 44-401 550-810 (948)
16 KOG1102 Rab6 GTPase activator 99.9 3.2E-24 6.9E-29 216.4 13.5 184 169-402 187-373 (397)
17 KOG2221 PDZ-domain interacting 99.8 5.6E-21 1.2E-25 170.5 3.3 188 44-292 76-267 (267)
18 KOG3636 Uncharacterized conser 99.6 3.1E-15 6.7E-20 146.1 15.4 177 190-416 91-273 (669)
19 KOG4436 Predicted GTPase activ 99.6 4E-14 8.7E-19 146.9 13.9 233 61-395 176-418 (948)
20 KOG1648 Uncharacterized conser 99.3 1.3E-13 2.8E-18 136.2 -0.7 280 31-412 521-800 (813)
21 KOG2801 Probable Rab-GAPs [Int 98.7 2.2E-07 4.7E-12 87.4 14.2 182 188-415 108-294 (559)
22 PF14961 BROMI: Broad-minded p 97.0 0.019 4E-07 64.3 15.9 120 258-423 1166-1286(1296)
23 KOG2224 Uncharacterized conser 82.6 0.44 9.5E-06 47.8 0.3 194 208-437 566-780 (781)
24 KOG2197 Ypt/Rab-specific GTPas 77.3 1.3 2.8E-05 46.5 1.7 76 41-117 148-224 (488)
25 PF10815 ComZ: ComZ; InterPro 33.6 69 0.0015 22.7 3.4 39 262-300 6-44 (56)
26 KOG2141 Protein involved in hi 26.6 3.7E+02 0.0081 29.6 9.0 65 168-234 335-400 (822)
27 PF08109 Antimicrobial14: Lact 25.3 47 0.001 19.9 1.2 13 208-220 3-15 (31)
No 1
>KOG4567 consensus GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=6.9e-46 Score=345.11 Aligned_cols=310 Identities=25% Similarity=0.440 Sum_probs=255.6
Q ss_pred HHHHhhcc-CCCccHHHHHHHHHhCCCC--CCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 013736 45 RWHAAFSE-DGHLDIAKVLRRIQRGGIH--PSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIG 121 (437)
Q Consensus 45 ~W~~~l~~-~~~i~~~kl~k~l~~~GIp--~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~ 121 (437)
..++.+.. +..+|..+ ++..+..|+| ..+|+.+|+++||++|++.+. |...+.+.|..|..+.++.. ..+|
T Consensus 11 ~~edvl~~~~~~id~ke-lr~~~~~g~p~~~~lR~~~WkllL~Yl~~er~~--w~s~La~~R~~Y~q~i~e~v---~epg 84 (370)
T KOG4567|consen 11 SIEDVLNPADDTIDLKE-LRKLCFYGVPDDASLRPLVWKLLLGYLPPERSK--WTSFLAKKRSLYKQFIEEIV---DEPG 84 (370)
T ss_pred hHHHhhccccchhhHHH-HHHHhhcCCCCccchhHhHHHHHHhhcChhhhh--hHHHHHHHHHHHHHHHHHhc---cCcc
Confidence 44455554 33478888 7777778999 799999999999999999975 45888999999999988752 2333
Q ss_pred CCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCChh------------
Q 013736 122 SGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESET------------ 189 (437)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~------------ 189 (437)
..+.. .. ........++|++..+.+.|+ ...+..+.+.||++||.||.|+..+|+...
T Consensus 85 ~~~~~-~~-v~~~D~~~dhPls~~~~sdwn--------~ff~d~e~l~QIdrDvrr~~pdi~ff~~~~~~p~~~~~~~~~ 154 (370)
T KOG4567|consen 85 KKDNS-KK-VDSNDTDEDHPLSLGPTSDWN--------TFFKDCEVLLQIDRDVRRTHPDISFFQLASSYPCRQGMDSRR 154 (370)
T ss_pred ccccc-cc-cccCcccccCCCCCCchhhHH--------HHhhhhHHHHHHHHHHHHhCcchHhhhhccccccccchhhHh
Confidence 22111 11 122224566788777777763 233344679999999999999999886521
Q ss_pred ---------------hHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhcc----------CHHHHHHHHHHHHhhccc
Q 013736 190 ---------------NQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLE----------NEADAFWCFEHTMRRLRE 244 (437)
Q Consensus 190 ---------------~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~----------~E~~aF~~f~~l~~~~~~ 244 (437)
......|||..||..||.+||+||||+|+||+++++. .|+|||+||+.||..+++
T Consensus 155 ~i~~~q~~~~n~~gl~~~~~erilfiyAKLNpGi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMseirD 234 (370)
T KOG4567|consen 155 RINASQEAGRNRLGLTRFAAERILFIYAKLNPGIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSEIRD 234 (370)
T ss_pred hhhhhhHhhhcccchhhhHHHHHHHHHhhcCCcchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHHHHH
Confidence 1233578999999999999999999999999999984 389999999999999999
Q ss_pred CcccC--CchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCch
Q 013736 245 NFRTN--TGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIF 322 (437)
Q Consensus 245 ~~~~~--~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~ 322 (437)
+|... .+.-|++..+..+..+|+.+|-+||.||+..+|.|..|+++|+.+|++.+||+++++||||.+++....
T Consensus 235 nf~k~LDdS~~GI~~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~r---- 310 (370)
T KOG4567|consen 235 NFIKTLDDSVGGIHFLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQR---- 310 (370)
T ss_pred HHHHhccccccchHHHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChhh----
Confidence 98753 455588888999999999999999999999999999999999999999999999999999999987543
Q ss_pred hhhcccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCC
Q 013736 323 SLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLD 402 (437)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~d 402 (437)
.+|++++|+|+|...|+.||+. ||+.-+++|++.| ..|
T Consensus 311 ---------------------------------------fd~Ll~iCcsmlil~Re~il~~--DF~~nmkLLQ~yp-~td 348 (370)
T KOG4567|consen 311 ---------------------------------------FDFLLYICCSMLILVRERILEG--DFTVNMKLLQNYP-TTD 348 (370)
T ss_pred ---------------------------------------hHHHHHHHHHHHHHHHHHHHhc--chHHHHHHHhcCC-CCC
Confidence 4589999999999999999985 9999999999999 889
Q ss_pred HHHHHHHHHHHHHH
Q 013736 403 AKKACNEALKIQKK 416 (437)
Q Consensus 403 ~~~ll~~A~~l~~~ 416 (437)
+..+++.|-.|..+
T Consensus 349 i~~~l~~A~~Lr~~ 362 (370)
T KOG4567|consen 349 ISKMLAVADSLRDK 362 (370)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999854
No 2
>KOG2058 consensus Ypt/Rab GTPase activating protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-42 Score=345.32 Aligned_cols=253 Identities=24% Similarity=0.413 Sum_probs=212.9
Q ss_pred HHHHHhhccC-------CCccHHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 013736 44 RRWHAAFSED-------GHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNI 116 (437)
Q Consensus 44 ~~W~~~l~~~-------~~i~~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~ 116 (437)
.+|.-.+.++ .......-++.++|+|||+.+|+.||..+.|.... ...+..|+.+...-..
T Consensus 124 ~~~~l~~~~~~~~~~~~~~~~~s~elk~liRkGiP~~~R~~VW~~~~g~~~~-----------~~~~~~yq~ll~~~~~- 191 (436)
T KOG2058|consen 124 LRWELELQSNIKLHSPNDFPPRSDELKRLIRKGIPPELRGEVWWVLSGARRQ-----------LNYPGYYQELLRKGDE- 191 (436)
T ss_pred HHHHHHhhhhhcccccccccCCcHHHHHHHHcCCChhhhhHHHHHHhcchhh-----------ccCchhHHHHHhcCCC-
Confidence 4677776653 11222233899999999999999999999993211 1115677766554210
Q ss_pred ccccCCCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCC-cCCCChh--hHHH
Q 013736 117 VPIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSL-VFYESET--NQAK 193 (437)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~-~~f~~~~--~~~~ 193 (437)
+. ....+||+.|+.||||++ +.|..+. ++..
T Consensus 192 ------------------------------------------~~----~~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~ 225 (436)
T KOG2058|consen 192 ------------------------------------------KK----SPVVKQIKLDLPRTFPDNFKGFDSEDSDGRQT 225 (436)
T ss_pred ------------------------------------------cc----chHHHHHHhccccccCCCcccCCCCCchHHHH
Confidence 00 035789999999999999 7887754 4899
Q ss_pred HHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHCHHH
Q 013736 194 LWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKL 273 (437)
Q Consensus 194 L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L 273 (437)
|+|||.||+.+||.+|||||||.+||++|+++..|++|||||..+++++.+.|+ .+++.|.+....+|+.+|+..+|+|
T Consensus 226 LrRvL~Aya~hNp~vGYCQGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~Yy-t~nL~g~qvDQ~VL~~llre~lPkl 304 (436)
T KOG2058|consen 226 LRRVLLAYARHNPSVGYCQGMNFLAALLLLLMPSEEDAFWMLVALIENYLPRYY-TPNLIGSQVDQKVLRELLREKLPKL 304 (436)
T ss_pred HHHHHHHHHhhCCCCcchhhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchhhc-CchhhhhhccHHHHHHHHHHHCHHH
Confidence 999999999999999999999999999999998799999999999999988855 7789999999999999999999999
Q ss_pred HHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhcc
Q 013736 274 HQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNV 353 (437)
Q Consensus 274 ~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (437)
+.||..++++..+++++||+|+|+..+|.+.++||||++|.+|..
T Consensus 305 ~~~l~~~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f~eGsk----------------------------------- 349 (436)
T KOG2058|consen 305 SLHLEGNGVDASLETLPWFLTLFVDILPSETVLRIWDCLFYEGSK----------------------------------- 349 (436)
T ss_pred HHhhhhcCCCeeeeehhhhHHHhcccccHHHHHHHHHHHHhcccH-----------------------------------
Confidence 999999999999999999999999999999999999999998764
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCC
Q 013736 354 KTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNL 401 (437)
Q Consensus 354 ~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~ 401 (437)
+++.+++|++..+++.|+. +.+..++++++..+...+
T Consensus 350 ----------vlfr~Alai~k~~ee~il~-~~~~~~i~~~~~~~~~~~ 386 (436)
T KOG2058|consen 350 ----------VLFRVALAILKKHEEEILK-EDSSKEILRVLPDLTKRS 386 (436)
T ss_pred ----------HHHHHHHHHHHHhHHHHhc-CCCHHHHHHHHHHHHHHh
Confidence 3444899999999999999 679999999998877554
No 3
>KOG1092 consensus Ypt/Rab-specific GTPase-activating protein GYP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-40 Score=319.98 Aligned_cols=273 Identities=25% Similarity=0.497 Sum_probs=240.1
Q ss_pred ccHHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCC
Q 013736 56 LDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDG 135 (437)
Q Consensus 56 i~~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (437)
+|.++ ++.++++|||..+|+.+|++++|+.|.++. -++...+.++..|.+++.++...... .+.+
T Consensus 176 id~~~-Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~~--rr~~~l~~Kr~eY~~~v~~~~~~~~~------------~~~~ 240 (484)
T KOG1092|consen 176 IDLEK-LRKLCWNGVPSKMRPIVWKLLSGYLPPNSD--RREGTLQRKRKEYVDSVVQYFDSLTN------------GDED 240 (484)
T ss_pred ccHHH-HHHHccCCCCccccCccceeeecccCcchh--hhhhhHHHHHHHHHHHHHHHhccCCC------------cccc
Confidence 45554 999999999999999999999999999985 45677889999999999987643211 0000
Q ss_pred CccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCChhhHHHHHHHHHHHhHhcCCCcccCChh
Q 013736 136 QSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMN 215 (437)
Q Consensus 136 ~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~~IL~~y~~~~p~igY~QGm~ 215 (437)
.++.+||..|++|+.|..++|..+..++.+.|||..++.++|..||+||.+
T Consensus 241 -----------------------------~d~~rQI~id~prm~p~~~l~q~~~vq~~lerIl~iwairhpAsGyvqgin 291 (484)
T KOG1092|consen 241 -----------------------------QDTWRQIPIDIPRMNPHIPLFQQKIVQEMLERILYIWAIRHPASGYVQGIN 291 (484)
T ss_pred -----------------------------CccccccccCCCCCCccccchhhHHHHHHHHHHHHHHHHhcccccccccce
Confidence 135799999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcc-------------------------CHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHC
Q 013736 216 DICSPMIVLLE-------------------------NEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTID 270 (437)
Q Consensus 216 ~Iaa~ll~~~~-------------------------~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~ 270 (437)
+++.+++.++. -|+|||||+.+|++.+..+|.+.+ +|++.....++.|++..|
T Consensus 292 dlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~~~~iEADsyWClskLLD~IQDNYtfaQ--pGIq~kV~~L~eLv~RID 369 (484)
T KOG1092|consen 292 DLVTPFFVVFLSEYLGPIMDVESIDMSLLPAENAEDIEADAYWCLSKLLDGIQDNYTFAQ--PGIQRKVKNLKELVQRID 369 (484)
T ss_pred eeechhhhhhhHhhcCccccccccchhhccHHHHhhhhhhHHHHHHHHHHHhhhhhhhcC--hhHHHHHHHHHHHHHHhc
Confidence 99999998872 289999999999999999998754 599999999999999999
Q ss_pred HHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhh
Q 013736 271 PKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFER 350 (437)
Q Consensus 271 P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (437)
+.|++||.++|++-..|++||+-+||.|++|+..++|+||.+++++...
T Consensus 370 ~~~hkHlq~~gveylQFAFRWmNcLLmRE~pl~~~iRlWDTY~aE~dgf------------------------------- 418 (484)
T KOG1092|consen 370 EPLHKHLQEHGVEYLQFAFRWMNCLLMREFPLRCTIRLWDTYLAEPDGF------------------------------- 418 (484)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhccchhHHHHHHHhhcCccch-------------------------------
Confidence 9999999999999999999999999999999999999999999986543
Q ss_pred hccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCC----CHHHHHHHHHHHHHHHH
Q 013736 351 KNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNL----DAKKACNEALKIQKKYL 418 (437)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~----d~~~ll~~A~~l~~~~~ 418 (437)
++|++|+|+|.|..-+++|++. ||.+++.+|+++|..- +++-+++.|..+..-|.
T Consensus 419 -----------~~FhvYvcAAFL~kW~~eL~e~--DFQ~~ilfLQnlPT~~W~d~eIellLseA~~~k~~f~ 477 (484)
T KOG1092|consen 419 -----------NEFHVYVCAAFLLKWSSELMEN--DFQELILFLQNLPTHNWSDREIELLLSEAFRLKSVFS 477 (484)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999964 9999999999999665 77778888877654443
No 4
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.3e-40 Score=315.99 Aligned_cols=328 Identities=26% Similarity=0.526 Sum_probs=270.9
Q ss_pred CCCCCCCcccccccCCC--CCcHHHHHH-hhccCCCc-cHHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHH
Q 013736 23 ECQADVPKVRFKARAGK--TLSARRWHA-AFSEDGHL-DIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQI 98 (437)
Q Consensus 23 ~~~~~~p~~~~~~~~~~--~l~~~~W~~-~l~~~~~i-~~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~ 98 (437)
.|.+..|..+.+++.+. +++..-|.. .+++.|.+ +.-+++|.++.|||..++|+.||++||.+|+..+|.++|..+
T Consensus 385 i~rpel~~se~hpde~~~kki~~n~~~~t~lne~gqiedd~~lrk~iffggid~sir~evwpfllk~ys~est~edr~al 464 (781)
T KOG2224|consen 385 ICRPELKKSEMHPDEGDVKKIGTNAFLGTHLNEKGQIEDDLKLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAAL 464 (781)
T ss_pred eecCCCCccccCCccchhhhhhHHHHHHhhhhhcccchhHHHhhhhheeccchhhhhcchhHHHHHHhccccchhHHHHH
Confidence 34567777888888775 455567776 67777888 445778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhhhccccCCCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccc
Q 013736 99 RQQRRQQYAAWKTE-CQNIVPIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVR 177 (437)
Q Consensus 99 ~~~~~~~Y~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~R 177 (437)
+..+|++|+....+ ..+|.| ++...-|+...-.++|||.|
T Consensus 465 ~~~krkey~eiqqkrlysmsp---------------------------------------eeh~~fwknvq~tvdkdvvr 505 (781)
T KOG2224|consen 465 MDIKRKEYEEIQQKRLYSMSP---------------------------------------EEHIAFWKNVQFTVDKDVVR 505 (781)
T ss_pred HHHHHHHHHHHHHHHhhcCCH---------------------------------------HHHHHHHhheEEEEecceee
Confidence 99999999988665 224432 34455666666778999999
Q ss_pred cCCCCcCCCCh--hhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcc------------
Q 013736 178 TDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLR------------ 243 (437)
Q Consensus 178 T~~~~~~f~~~--~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~------------ 243 (437)
|.++++||.++ ++.+.++|||..|+.|||.+||.|||+++.|+.|.-..+|.++||||+.+|..+.
T Consensus 506 tdrnn~ff~gddnpn~e~mk~illn~avyn~~m~ysqgmsdllapvlcevqnesetfwcfvglmqgmsdlvapilaevld 585 (781)
T KOG2224|consen 506 TDRNNPFFCGDDNPNTESMKNILLNFAVYNPAMGYSQGMSDLLAPVLCEVQNESETFWCFVGLMQGMSDLVAPILAEVLD 585 (781)
T ss_pred ccCCCCcccCCCCCcHHHHHHHHHhheeecccccccccchhhcchhhhhhccccchhhhhhhhhccchhhhhhHHHhhhc
Confidence 99999999875 6799999999999999999999988777777777666666666666666665321
Q ss_pred --------------cCcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCc--cchhhhHHHHhccccCChhhHHH
Q 013736 244 --------------ENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGE--YLFAFRMLMVLFRREFSFVDALY 307 (437)
Q Consensus 244 --------------~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~--~~~~~~WfltlF~~~lp~~~vlr 307 (437)
..|...+....+...+..+..|++...|..|+||.++|-+. .+||.+|++.+|.|+||-..++|
T Consensus 586 esdtfwcfvglmqna~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchrwlllcfkref~ea~air 665 (781)
T KOG2224|consen 586 ESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHRWLLLCFKREFPEAEAIR 665 (781)
T ss_pred cccchhhhhhhhcceEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHHHHHHHhhhcccHHHHHH
Confidence 23444566667888999999999999999999999988543 37999999999999999999999
Q ss_pred HHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCh
Q 013736 308 LWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGL 387 (437)
Q Consensus 308 iWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~ 387 (437)
||+..|++ +.. .-|++|+|+||+..+.+.+++..-..
T Consensus 666 iweacwa~-y~t------------------------------------------dyfhlficlaiiaiy~ddvi~q~l~~ 702 (781)
T KOG2224|consen 666 IWEACWAH-YLT------------------------------------------DYFHLFICLAIIAIYADDVIAQNLAP 702 (781)
T ss_pred HHHHHHHH-hhH------------------------------------------HHHHHHHHHHHHHHhhhHHHHhhcCc
Confidence 99999986 222 24799999999999999999988889
Q ss_pred HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhhhhhcCCCCCCcc
Q 013736 388 DDVVKILADITGNLDAKKACNEALKIQKKYLSKVLFIFPLSDSCT 432 (437)
Q Consensus 388 ~~i~~~l~~l~~~~d~~~ll~~A~~l~~~~~~~~~~~~~~~~~~~ 432 (437)
|+++--+.++.-.||-+-++.+|..|..||......++.+.+-|+
T Consensus 703 demllhf~nlam~mdgelilrkar~ll~qfr~lpkipcsl~~lck 747 (781)
T KOG2224|consen 703 DEMLLHFGNLAMHMDGELILRKARGLLHQFRLLPKIPCSLHDLCK 747 (781)
T ss_pred hhHHHhhhhhhhhcCchhhHHHHHHHHHHHhhcCCCCccHHHHHH
Confidence 999999999999999999999999999999887766666655554
No 5
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=2.8e-39 Score=298.48 Aligned_cols=194 Identities=33% Similarity=0.628 Sum_probs=171.3
Q ss_pred hCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCccCCCCcccc
Q 013736 67 RGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDGQSLQDSNRDSL 146 (437)
Q Consensus 67 ~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 146 (437)
++|||+.+|+.||+.++|+.+...+ ..+..|.+++++....
T Consensus 2 ~~Gip~~~R~~vW~~ll~~~~~~~~---------~~~~~Y~~l~~~~~~~------------------------------ 42 (199)
T smart00164 2 RKGVPPSLRGVVWKLLLNAQPMDTS---------ADKDLYSRLLKETAPK------------------------------ 42 (199)
T ss_pred CCCCCHHHHHHHHHHHhCCchhhhc---------ccchHHHHHHHhhcCC------------------------------
Confidence 6899999999999999999765432 1357888888764210
Q ss_pred CCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCCh--hhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHh
Q 013736 147 DQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVL 224 (437)
Q Consensus 147 ~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~ 224 (437)
+. ...++|++||.||+|+++.|+.. .+++.|.|||.+|+.++|++||||||++||++++++
T Consensus 43 -----------~~------~~~~~I~~Dv~Rt~~~~~~f~~~~~~~~~~L~~IL~~~~~~~p~~gY~QGm~~i~~~ll~~ 105 (199)
T smart00164 43 -----------DK------SIVHQIEKDLRRTFPEHSFFQDKEGPGQESLRRVLKAYALYNPEVGYCQGMNFLAAPLLLV 105 (199)
T ss_pred -----------Ch------hhHHHHhcccCCCCCCchhhcCCCcccHHHHHHHHHHHHHHCCCCceeccHHHHHHHHHHh
Confidence 00 13579999999999999999863 589999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHh-CCCCccchhhhHHHHhccccCChh
Q 013736 225 LENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLED-LDGGEYLFAFRMLMVLFRREFSFV 303 (437)
Q Consensus 225 ~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~-~~i~~~~~~~~WfltlF~~~lp~~ 303 (437)
+.+|++|||||+++|++..+.++ .+++.++...+..++.+|+.++|+||+||.+ .++++.+|+.+|++|+|++++|++
T Consensus 106 ~~~e~~af~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~p~l~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~ 184 (199)
T smart00164 106 MPDEEDAFWCLVKLMERYGPNFY-LPDMSGLQLDLLQLDRLVKEYDPDLYKHLKDKLGIDPSLYALRWFLTLFARELPLE 184 (199)
T ss_pred cCCHHHHHHHHHHHHHHhCcccC-CCChHHHHHHHHHHHHHHHHHCHHHHHHHHHhcCCCchhHHHHHHHHHHHhhCCHH
Confidence 98899999999999999877764 5677789999999999999999999999996 999999999999999999999999
Q ss_pred hHHHHHHHHhcccC
Q 013736 304 DALYLWELMWAMEY 317 (437)
Q Consensus 304 ~vlriWD~~l~~~~ 317 (437)
.++||||.++++|.
T Consensus 185 ~~~riwD~~l~eG~ 198 (199)
T smart00164 185 IVLRIWDVLFAEGS 198 (199)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999874
No 6
>KOG2223 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=9.8e-36 Score=287.02 Aligned_cols=260 Identities=22% Similarity=0.357 Sum_probs=210.5
Q ss_pred HHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHhhhhccccCCCccccccccccCCCcc
Q 013736 60 KVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQ-YAAWKTECQNIVPIIGSGKFITAAIVTDDGQSL 138 (437)
Q Consensus 60 kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~-Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (437)
+-++.++|.|||+.+|+.||.+..|- ..+-|.+-....+.+..+. ...+-++.
T Consensus 292 rR~relWwQGiP~~VRGkvW~laIGN-el~it~elfd~~la~Aker~ak~~aeq~------------------------- 345 (586)
T KOG2223|consen 292 RRVRELWWQGIPPSVRGKVWSLAIGN-ELNITYELFDIALARAKEREAKSLAEQM------------------------- 345 (586)
T ss_pred HHHHHHHHccCChhhcchhhHhhhCc-ccccCHHHHHHHHHHHHHHHHHHHHhhc-------------------------
Confidence 34789999999999999999999993 4444443322222222111 11111110
Q ss_pred CCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCC-hhhHHHHHHHHHHHhHhcCCCcccCChhhH
Q 013736 139 QDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYES-ETNQAKLWDVLAIYSWVDNDIGYVQGMNDI 217 (437)
Q Consensus 139 ~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~-~~~~~~L~~IL~~y~~~~p~igY~QGm~~I 217 (437)
.+ ...+......+|+.|+.||||+..+|+. ++-.+.|..+|.||+.|.||+||+|||.+|
T Consensus 346 -----------~~--------sa~~re~sv~~i~LDisrTfpsl~iFqk~GPy~d~L~~lL~AYt~yRpDvgYVqgmSFI 406 (586)
T KOG2223|consen 346 -----------SN--------SAADREASVELIKLDISRTFPSLSIFQKGGPYHDDLHSLLGAYTCYRPDVGYVQGMSFI 406 (586)
T ss_pred -----------cc--------chhhhhcchhheeechhccCcceeeeccCCchHHHHHHHhhhheeecCccccccchHHH
Confidence 00 0112234578999999999999999987 577999999999999999999999999999
Q ss_pred HHHHHHhccCHHHHHHHHHHHHhhc-c-cCcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHh
Q 013736 218 CSPMIVLLENEADAFWCFEHTMRRL-R-ENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVL 295 (437)
Q Consensus 218 aa~ll~~~~~E~~aF~~f~~l~~~~-~-~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~Wfltl 295 (437)
+|++++.+ ++.+||.+|.+|+++- . -.|..++ ..+...+..|+..+++..|+|+.||.++++.|.+|++.|+.+|
T Consensus 407 aAvLllnm-d~~~AFiafANLLdkp~q~Aff~~d~--s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftl 483 (586)
T KOG2223|consen 407 AAVLLLNM-DLADAFIAFANLLDKPCQQAFFRVDH--SSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTL 483 (586)
T ss_pred HHHHHHcC-CcHHHHHHHHHHhccHHHHHHHhcCc--HHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHH
Confidence 99987777 8899999999999983 2 2333333 4788999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHH
Q 013736 296 FRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLET 375 (437)
Q Consensus 296 F~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~ 375 (437)
|+..+|++..+||||+|+-+|. +|++..+++||..
T Consensus 484 yskslpldlacRIwDvy~rdge---------------------------------------------eFlfr~~lgIlkl 518 (586)
T KOG2223|consen 484 YSKSLPLDLACRIWDVYCRDGE---------------------------------------------EFLFRTALGILKL 518 (586)
T ss_pred HhccCChHHhhhhhheeeecch---------------------------------------------HHHHHHHHHHHHH
Confidence 9999999999999999998875 3678889999999
Q ss_pred HHHHHHHhcCChHHHHHHHhhhcCCCCHHHHHHHHHHHH
Q 013736 376 KNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQ 414 (437)
Q Consensus 376 ~~~~ll~~~~~~~~i~~~l~~l~~~~d~~~ll~~A~~l~ 414 (437)
++.+++. +|+..+.++|..+|..+..+++......+.
T Consensus 519 yepkLl~--mDf~~~~qfLtklp~dL~~eelF~~i~~~~ 555 (586)
T KOG2223|consen 519 YEPKLLV--MDFIHVAQFLTKLPEDLTPEELFMHIAYIQ 555 (586)
T ss_pred ccchHhh--hhHHHHHHHHHhCcccCCHHHHHHHHHHHh
Confidence 9999997 499999999999999999888877665554
No 7
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=303.83 Aligned_cols=349 Identities=40% Similarity=0.722 Sum_probs=290.7
Q ss_pred ccccccCCCCCcHHHHHHhhccCCCcc-HHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 013736 31 VRFKARAGKTLSARRWHAAFSEDGHLD-IAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAW 109 (437)
Q Consensus 31 ~~~~~~~~~~l~~~~W~~~l~~~~~i~-~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l 109 (437)
....++...+++.++|...|.+++... ..++++.+..+||+|.+|+.+|++|+|+|+.+++.+++..++..++.+|..+
T Consensus 38 ~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~l~~i~~~gi~psir~evw~fll~~y~~~~~~~~~~~~r~~~~~~~~~l 117 (488)
T KOG2197|consen 38 IWVLIKPGKTLKPEKWQANFDPDGRLSGFVKLLKLIILGGIDPSIRGEVWEFLLGCYDLDSTFEERNQLRVARRPQYNEL 117 (488)
T ss_pred cceeeccccccchhhhhhccCCCccccchhhhheeeecCCCCCcccchhHHHHhcccCCCCchHHHHHHHhhcccchHHH
Confidence 666777788888999999999988875 7788899999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhccccCCC-ccccccccccCCCcc-----------------CCC--------------Ccc------ccCCCCC
Q 013736 110 KTECQNIVPIIGSG-KFITAAIVTDDGQSL-----------------QDS--------------NRD------SLDQGWH 151 (437)
Q Consensus 110 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------------~~p--------------~~~------~~~~~~~ 151 (437)
...+..+.+..+.+ ...+.....+..+|. .+. ... ..-..|.
T Consensus 118 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 197 (488)
T KOG2197|consen 118 LLVCQMMKSTVGNGLSYVVSSVVSDNRSPSLTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRAEVWKFLLDYSPWD 197 (488)
T ss_pred HHHcchhhhhhccccceeeeEEeecCCCCcchhhhhhhhhhhccccccchhhhheecccccccchhhhhhhhhhcccCcc
Confidence 99999888877665 333333332222221 000 000 0000011
Q ss_pred CCCc----------cchHHHHHH--------------HHHHhHHhhcccccCCCCcCCCChhh--HHHHHHHHHHHhHhc
Q 013736 152 VDGA----------ISDKKVLQW--------------MLGLHQIGLDVVRTDRSLVFYESETN--QAKLWDVLAIYSWVD 205 (437)
Q Consensus 152 ~~~~----------~~d~~~~~~--------------~~~~~qI~~Dv~RT~~~~~~f~~~~~--~~~L~~IL~~y~~~~ 205 (437)
.... -.+....+| ......|.+||.||.+.+.++....+ ...|..||.+|+.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~~~~~~~~~n~~~~~l~~iL~ty~~~~ 277 (488)
T KOG2197|consen 198 STTRERVSLRKLTDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRSLEFYEGEENPHLARLVDILLTYAVYD 277 (488)
T ss_pred cccccccccccccccHhhhhhhheeccccccccccchhhhhhhhhhhccccchhhhhhhcccccCHHHHHHHHhhccccc
Confidence 1000 001112222 23346789999999999999998888 999999999999999
Q ss_pred CCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCcc
Q 013736 206 NDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEY 285 (437)
Q Consensus 206 p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~ 285 (437)
+++||||||+++.++++.++.+|.+|||||+.+|++...+|..+.. ++...+..+..+++..||.||+||++.+....
T Consensus 278 ~d~GY~QgmSDllspi~~v~~de~~aFwcFv~fm~~~~~nF~~d~~--~~~~Ql~~~~~li~~~dp~l~~hLe~~d~~~~ 355 (488)
T KOG2197|consen 278 FDLGYCQGMSDLLSPILIVMEDEVEAFWCFVGFMDRLRHNFRIDQS--GMQTQLAQLSSLIQELDPRLYQHLEKLDAGDL 355 (488)
T ss_pred CccccccCchhhcCcceeeecCchHHHHHHHHHHHHHhhcCccccc--cHHHHhhhhhhhccccCHHHHhhccccCCCcc
Confidence 9999999999999999999999999999999999999889886554 89999999999999999999999999999999
Q ss_pred chhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHH
Q 013736 286 LFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALS 365 (437)
Q Consensus 286 ~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (437)
.|+++|++.+|.++|.+++++++|+++++.-+.. .|.
T Consensus 356 ~f~fr~l~v~frrEf~~ed~l~LWEvlw~~~~~~-------------------------------------------~f~ 392 (488)
T KOG2197|consen 356 FFCFRMLLVPFRREFEFEDSLRLWEVLWTDLPSP-------------------------------------------HFH 392 (488)
T ss_pred ceeeehhhcccccccccccHHHHHHHHHhcCccc-------------------------------------------hHH
Confidence 9999999999999999999999999999976543 489
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhhhhhc
Q 013736 366 VFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYLSKVLFI 424 (437)
Q Consensus 366 l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~d~~~ll~~A~~l~~~~~~~~~~~ 424 (437)
++++.|++....+.|+....+++++++.++.+....|+..++..|..++.++....+..
T Consensus 393 ~~~~~~~l~~~~~~l~~~~~~~~e~l~~i~~~~~~~d~~~~~~~A~~~~~~~k~~~~~~ 451 (488)
T KOG2197|consen 393 LYVAPAILNKDPQTLMEQGKSFNEVLKHVNLLSEKADVLWVLVRAEALERQNKQMEEPP 451 (488)
T ss_pred HHHHHhhhhcchHHHHhcCccchhHHhhcccccccchhhhHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999998887776654
No 8
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=4.3e-34 Score=298.08 Aligned_cols=254 Identities=27% Similarity=0.462 Sum_probs=204.8
Q ss_pred CcHHHHHHhhccCCC-c---cHHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 013736 41 LSARRWHAAFSEDGH-L---DIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNI 116 (437)
Q Consensus 41 l~~~~W~~~l~~~~~-i---~~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~ 116 (437)
.....|.+.+..++. . ...+ ++.+.+.|||+.+|+.||..++|+.+.... ....|..+.+.+...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~gip~~~r~~vw~~~~~~~~~~~~----------~~~~y~~~~~~~~~~ 249 (496)
T COG5210 181 AADKLWISYLDPNPLSFLPVQLSK-LRELIRKGIPNELRGDVWEFLLGIGFDLDK----------NPGLYERLLNLHREA 249 (496)
T ss_pred HHHHHHHHHHhcccchhhhhhHHH-HHHHHHhcCChHhhhhhHHHHhccchhhcc----------CchHHHHHHHHHHhc
Confidence 345578888877555 2 3444 677778899999999999999999866542 335555555543221
Q ss_pred ccccCCCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCChhhHHH--H
Q 013736 117 VPIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAK--L 194 (437)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~~~~--L 194 (437)
.. | . ....++|++||.||+|.+..|+....... |
T Consensus 250 ~~----------------------~-----------------~-----~~~~~~i~~Dl~rt~~~~~~f~~~~s~~~~~L 285 (496)
T COG5210 250 KI----------------------P-----------------T-----QEIISQIEKDLSRTFPDNSLFQTEISIRAENL 285 (496)
T ss_pred CC----------------------C-----------------c-----HHHHHHHHccccccccccccccCcccccHHHH
Confidence 00 0 0 02478999999999999999988776666 9
Q ss_pred HHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhc-ccCcccCCchhhHHHHHHHHHHHHHHHCHHH
Q 013736 195 WDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRL-RENFRTNTGMIGVQSQLSTLSQIIRTIDPKL 273 (437)
Q Consensus 195 ~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L 273 (437)
+|||.+|+.+||++||||||++++|+|++++..|++||||++.||+.. .+.++ ..++.|+...+..+..+++..+|+|
T Consensus 286 ~rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF~~l~~L~~~~~l~~~~-~~~~~G~~~~~~~l~~~v~~~~p~l 364 (496)
T COG5210 286 RRVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAFWCLVKLLKNYGLPGYF-LKNLSGLHRDLKVLDDLVEELDPEL 364 (496)
T ss_pred HHHHHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHHHHHHHHHHhccchhhc-ccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999977999999999999942 33333 4577899999999999999999999
Q ss_pred HHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhcc
Q 013736 274 HQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNV 353 (437)
Q Consensus 274 ~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (437)
|+||...++...+|+++||+++|.+++|++.++||||++|++|..
T Consensus 365 ~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~eg~~----------------------------------- 409 (496)
T COG5210 365 YEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFLEGSS----------------------------------- 409 (496)
T ss_pred HHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHHhccH-----------------------------------
Confidence 999999999999999999999999999999999999999998764
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhh
Q 013736 354 KTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILAD 396 (437)
Q Consensus 354 ~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~ 396 (437)
+.+.+++|++...+.+++.. .+...+..++..
T Consensus 410 ----------~l~~~~~~~l~~~~~~l~~~-~~~~~~~~~~~~ 441 (496)
T COG5210 410 ----------MLFQLALAILKLLRDKLLKL-DSDELLDLLLKQ 441 (496)
T ss_pred ----------HHHHHHHHHHHhhhhhhhcc-CchhHHHHHHHh
Confidence 46668889999999999884 344444444433
No 9
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=100.00 E-value=1.9e-33 Score=261.76 Aligned_cols=169 Identities=31% Similarity=0.603 Sum_probs=148.5
Q ss_pred HHhHHhhcccccCCCCcCCCChhhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCc
Q 013736 167 GLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENF 246 (437)
Q Consensus 167 ~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~ 246 (437)
..++|++||.||+++...+..+.++..|.+||.+|+.++|++||+|||++|++++++++.+|++|||||++++....+.+
T Consensus 46 ~~~~I~~Dv~rt~~~~~~~~~~~~~~~l~~iL~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~ 125 (214)
T PF00566_consen 46 IFEQIDKDVNRTFPNSFLFKNEQNQKSLERILSAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDF 125 (214)
T ss_dssp CHHHHHHHHCTSSTSCCCSTTHHHHHHHHHHHHHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGG
T ss_pred HHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHhccccccccccchhhhhhhhhhhhcccccchhccccchhccccccc
Confidence 36899999999999778888899999999999999999999999999999999999889999999999999994444444
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhc
Q 013736 247 RTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYE 326 (437)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~ 326 (437)
+ .++..++...+..++.+++.++|+|++||.+.++++..|+.+|+.|+|++.+|.+.++|||| ++.+|...
T Consensus 126 ~-~~~~~~~~~~~~~~~~ll~~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g~~~------- 196 (214)
T PF00566_consen 126 F-QPNFKGLQKILKIFEQLLKKHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEGYKF------- 196 (214)
T ss_dssp T-STTHHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHCTTH-------
T ss_pred c-cccccccchhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcCCCc-------
Confidence 4 34556899999999999999999999999999999999999999999999999999999999 66565431
Q ss_pred ccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 013736 327 SNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLL 381 (437)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll 381 (437)
+++++++|++...|++||
T Consensus 197 -------------------------------------~l~~~~lail~~~~~~il 214 (214)
T PF00566_consen 197 -------------------------------------FLFFIALAILKYLRDQIL 214 (214)
T ss_dssp -------------------------------------HHHHHHHHHHHHTHHHHH
T ss_pred -------------------------------------HHHHHHHHHHHHHHHHhC
Confidence 278899999999999987
No 10
>KOG2222 consensus Uncharacterized conserved protein, contains TBC, SH3 and RUN domains [Signal transduction mechanisms; General function prediction only]
Probab=99.97 E-value=2.3e-31 Score=259.07 Aligned_cols=253 Identities=23% Similarity=0.386 Sum_probs=212.0
Q ss_pred cHHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCC
Q 013736 57 DIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDGQ 136 (437)
Q Consensus 57 ~~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (437)
..+++...+..||||..+|+..|+.|.|.....+ ...-.|++..+++..-
T Consensus 158 ktdk~~~llkeggiphslr~~lw~rlsga~~kkk----------~ae~sy~~ilk~~and-------------------- 207 (848)
T KOG2222|consen 158 KTDKFEELLKEGGIPHSLRAFLWMRLSGALAKKK----------DAETSYEDILKACAND-------------------- 207 (848)
T ss_pred chHHHHHHHHcCCCCcchhHHHHHHhhhhhhhhc----------cccccHHHHHHHhccc--------------------
Confidence 3566666677788999999999999999864332 2345788888876320
Q ss_pred ccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCC--hhhHHHHHHHHHHHhHhcCCCcccCCh
Q 013736 137 SLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYES--ETNQAKLWDVLAIYSWVDNDIGYVQGM 214 (437)
Q Consensus 137 ~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~--~~~~~~L~~IL~~y~~~~p~igY~QGm 214 (437)
+. .+-.||++|+-|+.|++..|.+ +++...|+|||.+.+...|++||||||
T Consensus 208 ----------------------k~-----~~~~qiekdllr~lpnn~cf~k~n~~gi~~lrrilk~ia~ifpdigycqg~ 260 (848)
T KOG2222|consen 208 ----------------------KL-----MIGKQIEKDLLRILPNNACFSKKNGEGIEALRRILKCIAFIFPDIGYCQGM 260 (848)
T ss_pred ----------------------cc-----chhHHHHHHHHHhCCCcceeeCCCCcchHHHHHHHhhheeecCCcccccCc
Confidence 00 2357999999999999999976 578999999999999999999999999
Q ss_pred hhHHHHHHHhccCHHHHHHHHHHHHhhccc-CcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHH
Q 013736 215 NDICSPMIVLLENEADAFWCFEHTMRRLRE-NFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLM 293 (437)
Q Consensus 215 ~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~Wfl 293 (437)
.-|+|.+|+.+ .|+.||||+..+++.+.+ +|+ ..++.|++..-.+..+|+.-+.|.|-+-|.+++++.++....||+
T Consensus 261 gviva~lllf~-~ee~afwmmaaiiedilp~nfy-sqtllgiqaderv~~~li~~~l~~ldeal~~~dielslitl~w~l 338 (848)
T KOG2222|consen 261 GVIVACLLLFC-EEENAFWMMAAIIEDILPANFY-SQTLLGIQADERVMHHLIACHLPDLDEALEDHDIELSLITLHWFL 338 (848)
T ss_pred cHHHHHHHHHh-cchhHHHHHHHHHHHhcCchhh-hhhHhccchhHHHHHHHHHhccCchhHHHHhccceeeehHHHHHH
Confidence 99999866666 889999999999999654 455 667889999999999999999999999999999999999999999
Q ss_pred HhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHH
Q 013736 294 VLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVL 373 (437)
Q Consensus 294 tlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail 373 (437)
|||++++.....+||||.||-+|.-. ++.+++.||
T Consensus 339 tlf~nv~~~killriwd~~fy~g~i~---------------------------------------------ifql~i~il 373 (848)
T KOG2222|consen 339 TLFANVFHMKILLRIWDFFFYEGGIN---------------------------------------------IFQLIIGIL 373 (848)
T ss_pred HHHHHHHHHHHHHHHHHhheecCcch---------------------------------------------hHHHHHHHH
Confidence 99999999999999999999876532 444788898
Q ss_pred HHHHHHHHHh---cCChHHHHHHHhhhcCCC-CHHHHHHHHHHH
Q 013736 374 ETKNKKLLRE---AKGLDDVVKILADITGNL-DAKKACNEALKI 413 (437)
Q Consensus 374 ~~~~~~ll~~---~~~~~~i~~~l~~l~~~~-d~~~ll~~A~~l 413 (437)
....+.|-.- ..+..+|+..|+++|... |+++++.+|...
T Consensus 374 kmkeqdi~~iaettensa~if~als~ip~~vtdve~l~~~~~~~ 417 (848)
T KOG2222|consen 374 KMKEQDIKEIAETTENSADIFNALSDIPAEVTDVEKLFEQAGEF 417 (848)
T ss_pred HhhHHHHHHHHHhcccHHHHHHHHHhCCchhhhHHHHHHHHhhc
Confidence 8887777542 257788999999999777 999999888654
No 11
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=99.97 E-value=2.4e-30 Score=257.63 Aligned_cols=202 Identities=22% Similarity=0.334 Sum_probs=186.4
Q ss_pred HHhHHhhcccccCCCCcCCCChhhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhc-cCHHHHHHHHHHHHhhcccC
Q 013736 167 GLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLL-ENEADAFWCFEHTMRRLREN 245 (437)
Q Consensus 167 ~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~-~~E~~aF~~f~~l~~~~~~~ 245 (437)
+.+||+.|++|+.......+...+.+.|+|+|.||+..+|..-|.||+..+|+||++.. ++|.-||-|+..++-++..+
T Consensus 390 tdrqievdiprchQyd~~lsSp~~~r~lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~ 469 (725)
T KOG1093|consen 390 TDRQIEVDIPRCHQYDELLSSPKGHRKLRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQH 469 (725)
T ss_pred chhhhhcccchhhhcccccCCHHHHHHHHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 36899999999999888889999999999999999999999999999999999999875 67999999999999987766
Q ss_pred cccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhh
Q 013736 246 FRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLY 325 (437)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~ 325 (437)
|+..++...++..+..|.+++..+||+|++||..+|+.+++|+.+||+|+|+++||.+.++.+||-++..+.
T Consensus 470 fflkdns~vikeyLs~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil~LwD~lml~~~-------- 541 (725)
T KOG1093|consen 470 FFLKDNSNVIKEYLSMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKILHLWDNLMLGHS-------- 541 (725)
T ss_pred HHhhcCchhHHHHHHHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCC--------
Confidence 655555567899999999999999999999999999999999999999999999999999999999998653
Q ss_pred cccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCCHHH
Q 013736 326 ESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKK 405 (437)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~d~~~ 405 (437)
.|.+++++|++...|+.+|.+ ++.|.+.++.++| ++|++.
T Consensus 542 -------------------------------------SFplmi~vAil~~lR~~LLa~--nfne~illf~d~p-dldId~ 581 (725)
T KOG1093|consen 542 -------------------------------------SFPLMIGVAILIQLRDPLLAC--NFNECILLFSDLP-DLDIDV 581 (725)
T ss_pred -------------------------------------ccHHHHHHHHHHHhhhhhhhC--CchhheeeeccCC-cccHHH
Confidence 379999999999999999986 9999999999999 999999
Q ss_pred HHHHHHHHHHH
Q 013736 406 ACNEALKIQKK 416 (437)
Q Consensus 406 ll~~A~~l~~~ 416 (437)
++.+...+++.
T Consensus 582 ~Ires~~l~e~ 592 (725)
T KOG1093|consen 582 CIRESYHLMET 592 (725)
T ss_pred HHHHHhhhhhC
Confidence 99999988743
No 12
>KOG1091 consensus Ypt/Rab-specific GTPase-activating protein GYP6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=7.9e-30 Score=253.99 Aligned_cols=284 Identities=21% Similarity=0.311 Sum_probs=217.2
Q ss_pred CCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCcccccccccc----CCCccCCCCccccC
Q 013736 72 PSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTD----DGQSLQDSNRDSLD 147 (437)
Q Consensus 72 ~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~ 147 (437)
...|+.+|+++||++|.+.+.+. .-..+.+..|..++..+. .+|.... -.-++++|++..+.
T Consensus 27 s~~Rgv~Wrl~L~vLp~~~ss~i--d~~~~~ra~~r~~r~~~L------------~dPh~~k~~~s~d~~idnPLSq~~~ 92 (625)
T KOG1091|consen 27 SNLRGVRWRLLLGVLPSENSSWI--DNLRRLRANYRRLRRRLL------------IDPHNLKENHSPDLPIDNPLSQNPQ 92 (625)
T ss_pred hhhhhHHHHHhheecCCCchhHH--HHHHHHhhhhhccccccc------------cCccccccccCCCcccCCccccCCC
Confidence 46799999999999999876543 444566777776644431 1222111 12345678777666
Q ss_pred CCCCCCCccchHHHHHHHHHHhHHhhcccccCCCC-cCCCChhhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhcc
Q 013736 148 QGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSL-VFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLE 226 (437)
Q Consensus 148 ~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~-~~f~~~~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~ 226 (437)
+.|+. .+.+. +..+.|+.||.||||++ .+|+.+..+..|++||..|+..||.+||-||||++.|+++++..
T Consensus 93 S~W~r--fF~d~------EL~~~i~qDvsRtfPe~~~fFqs~~~q~mLr~iLl~~~lehp~i~YrQGMHElLAPl~fVl~ 164 (625)
T KOG1091|consen 93 SVWNR--FFRDA------ELEKTIDQDVSRTFPEHSLFFQSPEVQGMLRRILLLYALEHPEIGYRQGMHELLAPLLFVLH 164 (625)
T ss_pred chhhh--hcCcH------HHHHhhcchhhccCcchhhhhcCchhhHHHHHHHHHHHhhchhhhHHhhhhhhhhhhhhhee
Confidence 66642 23333 45789999999999999 89999999999999999999999999999999999999998863
Q ss_pred C------------------------------HHHHH--HHHHHHHhhcccCc------------c-------c---CCch
Q 013736 227 N------------------------------EADAF--WCFEHTMRRLRENF------------R-------T---NTGM 252 (437)
Q Consensus 227 ~------------------------------E~~aF--~~f~~l~~~~~~~~------------~-------~---~~~~ 252 (437)
. +.+++ -+++.+|..-..+| + . ..+.
T Consensus 165 ~D~q~l~h~se~~~~~l~f~E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~day~~~d~l~~~l 244 (625)
T KOG1091|consen 165 VDNQALLHVSESLFDKLGFEERDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHDAYVMFDALMPGL 244 (625)
T ss_pred hhHHHHHHHHHhhhhhcCcchhhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcCcccchhhhcccc
Confidence 1 22233 34555554311111 0 0 1234
Q ss_pred hhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHH-HHhcccCCCCchhhhcccCCC
Q 013736 253 IGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWE-LMWAMEYNPNIFSLYESNSST 331 (437)
Q Consensus 253 ~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD-~~l~~~~~~~~~~~~~~~~~~ 331 (437)
+.+......+.++|...|+.|+.||.+.+|+|.+|..||+..||.|+||+.+++.+|| ++++.+..
T Consensus 245 ~~v~e~~~~~~~lL~~~D~~Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr------------- 311 (625)
T KOG1091|consen 245 PPVFEANFAQYHLLAKVDKSLHSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPR------------- 311 (625)
T ss_pred hhHHHHhhhhhhhhhhccHHHHHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCch-------------
Confidence 4566777888899999999999999999999999999999999999999999999999 66665433
Q ss_pred CCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCCHHHHHHHHH
Q 013736 332 SDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEAL 411 (437)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~d~~~ll~~A~ 411 (437)
..++-++++++|...|+.++.. +....++++.++|..+|++++|..|.
T Consensus 312 ------------------------------~~Lv~~m~VsmLL~IRd~Llss--~~~tcL~~Lm~yP~~~Dv~~~iekAl 359 (625)
T KOG1091|consen 312 ------------------------------GILVACMFVSMLLYIRDSLLSS--EYQTCLQYLMNYPEIIDVDKFIEKAL 359 (625)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHh--cchhHHHHHhcCCCcCcHHHHHHHHH
Confidence 2367889999999999999985 56669999999999999999999999
Q ss_pred HHHHHHHhhhh
Q 013736 412 KIQKKYLSKVL 422 (437)
Q Consensus 412 ~l~~~~~~~~~ 422 (437)
.+.+-+.++.+
T Consensus 360 ~l~~~~~K~n~ 370 (625)
T KOG1091|consen 360 HLQKLFPKSNA 370 (625)
T ss_pred HHHHhcccccc
Confidence 98864555333
No 13
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=99.96 E-value=4.3e-29 Score=252.88 Aligned_cols=248 Identities=19% Similarity=0.346 Sum_probs=211.7
Q ss_pred HHHHHhhccCCC-cc---HHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 013736 44 RRWHAAFSEDGH-LD---IAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPI 119 (437)
Q Consensus 44 ~~W~~~l~~~~~-i~---~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~ 119 (437)
+.|.+.+.+.|. ++ ..+ ++++.+.|+|.+.|+++|..+.|.. ..+..+...|.++.+....
T Consensus 174 k~W~~~f~~~G~~~~~~qt~~-~~Klv~~gipe~~rgeiW~l~sGav----------~~~l~~~Geygkll~~~~G---- 238 (671)
T KOG4347|consen 174 KFWKKYFIKDGPNMNQIQTIL-LRKLLYNGFPEDPRGEIWYLASGAV----------ASLLLNPGEYGKLLHSVTG---- 238 (671)
T ss_pred HHHHHHHHHhcccccHHHHHH-HHHHHHHhcCCChHHHHHHhhhHHH----------HHhhcCcHHhhhhhhcccC----
Confidence 359999888655 33 344 6677778999999999999999973 4455677888888776321
Q ss_pred cCCCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCChhhHHHHHHHHH
Q 013736 120 IGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAKLWDVLA 199 (437)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~~IL~ 199 (437)
+. .-..+.|++|+.|..|+++.|+.+.+...|+|||.
T Consensus 239 ---------------------~~----------------------~~a~eEIE~Dl~rsLpEhpA~Q~e~gi~aLR~vL~ 275 (671)
T KOG4347|consen 239 ---------------------KR----------------------SVATEEIEPDLGRSLPEHPAFQSEPGIAALRRVLT 275 (671)
T ss_pred ---------------------Cc----------------------ccccccccCCCCCCCCcchhhhCCCchhhHHHHHH
Confidence 00 01246799999999999999999999999999999
Q ss_pred HHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHh
Q 013736 200 IYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLED 279 (437)
Q Consensus 200 ~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~ 279 (437)
||++.||+|||||-||-+++.+++.. .|++|||+++.+.+.+.+.|+ +.+..|....+.+++.+++.+.|.||.|+..
T Consensus 276 Aya~~Np~vGYcQaMNIV~s~lll~~-~EEeafwll~~lce~~ip~yy-s~~vvGtliDQ~vfe~lve~~lP~l~~~~~~ 353 (671)
T KOG4347|consen 276 AYAWSNPEVGYCQAMNIVGSELLLFC-KEEEAFWLLSKLCEIYIPDYY-SKTVVGTLIDQSVFEELVEDTLPVLGEHLAV 353 (671)
T ss_pred hhhccCCchhHHHHHHHHHHhhhhhh-ccchHHHHHHHHHHHhccccc-chhhhhhHHHHHHHHHHHHHhhhHHHHHhhh
Confidence 99999999999999999999866665 899999999999999988887 5677899999999999999999999999999
Q ss_pred CCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhccccCCCC
Q 013736 280 LDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPD 359 (437)
Q Consensus 280 ~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (437)
++ ...+...+||+|+|...+|++..+||.|+||-+|..
T Consensus 354 l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~eG~r----------------------------------------- 391 (671)
T KOG4347|consen 354 LG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFYEGPR----------------------------------------- 391 (671)
T ss_pred hc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhhcccH-----------------------------------------
Confidence 99 566889999999999999999999999999988764
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhc
Q 013736 360 KTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADIT 398 (437)
Q Consensus 360 ~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~ 398 (437)
.++.+++||+..+.++|+. +.|..+++..+.+.-
T Consensus 392 ----vlFqiaLail~~N~~~il~-~~dDge~~~vl~~y~ 425 (671)
T KOG4347|consen 392 ----VLFQIALAILKQNAERILS-ATDDGEAMMVLGNYF 425 (671)
T ss_pred ----HHHHHHHHHHHhhHHHhcc-cCCchHHHHHHHHHH
Confidence 2555999999999999999 678888888777654
No 14
>KOG2595 consensus Predicted GTPase activator protein [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-28 Score=228.48 Aligned_cols=205 Identities=20% Similarity=0.259 Sum_probs=179.2
Q ss_pred HhHHhhcccccCCCCc----CCCChhhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcc
Q 013736 168 LHQIGLDVVRTDRSLV----FYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLR 243 (437)
Q Consensus 168 ~~qI~~Dv~RT~~~~~----~f~~~~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~ 243 (437)
++|+..||.|++...+ .-.....++.|..++......+|++.|.||.||||.+|++++ .|.+|+-+...+-....
T Consensus 97 ~nQV~LDv~RSl~rfppg~p~~~R~~Lq~qL~~LI~rVl~~yP~L~YYQGyHDI~~tfLLv~-gE~~Al~l~E~L~~~~l 175 (395)
T KOG2595|consen 97 YNQVILDVERSLGRFPPGIPKELRLQLQKQLTELILRVLRKYPTLNYYQGYHDIVVTFLLVV-GELEALSLMEELSTLHL 175 (395)
T ss_pred cceEEEehhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCcchhcchhHHHHHHHHhh-hhHhhhHHHHHHHHHHH
Confidence 6899999999985433 222234577777787788889999999999999999999999 78999999998887766
Q ss_pred cCcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccC-ChhhHHHHHHHHhcccCCCCch
Q 013736 244 ENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREF-SFVDALYLWELMWAMEYNPNIF 322 (437)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~l-p~~~vlriWD~~l~~~~~~~~~ 322 (437)
.+|+ .+++.+....+..+..+++..+|+||+.|.+..+.+ +|+.+|++|||+|.+ ++..++|++|+|++...-
T Consensus 176 rdfM-~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aevgt-lFaLsWllTWFaH~L~~~~~vvRlfD~Flas~pl---- 249 (395)
T KOG2595|consen 176 RDFM-LPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEVGT-LFALSWLLTWFAHNLKDIRIVVRLFDFFLASHPL---- 249 (395)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcccc-eehhhHHHHHHhhcchhHHHHHHHHHHHHhcCcc----
Confidence 7777 467888999999999999999999999999998876 999999999999999 899999999999997543
Q ss_pred hhhcccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCC
Q 013736 323 SLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLD 402 (437)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~d 402 (437)
..+|++++++..++++|+++..++.-++.++..+|..+.
T Consensus 250 -----------------------------------------~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq~lp 288 (395)
T KOG2595|consen 250 -----------------------------------------LPIYVYAAVVLYRRSEILKCDCDMSLLHGLLSTIPQDLP 288 (395)
T ss_pred -----------------------------------------hhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHhCccccC
Confidence 379999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 013736 403 AKKACNEALKIQKKYLSK 420 (437)
Q Consensus 403 ~~~ll~~A~~l~~~~~~~ 420 (437)
.+++|+++..++.++.-.
T Consensus 289 ~d~lik~s~~~i~~~~~t 306 (395)
T KOG2595|consen 289 YDTLIKESVLLITRKPAT 306 (395)
T ss_pred HHHHHHHHHHHHhcCChh
Confidence 999999998877665433
No 15
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.95 E-value=5.3e-27 Score=241.09 Aligned_cols=254 Identities=21% Similarity=0.372 Sum_probs=206.8
Q ss_pred HHHHHhhcc---CCCccHHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013736 44 RRWHAAFSE---DGHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPII 120 (437)
Q Consensus 44 ~~W~~~l~~---~~~i~~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~ 120 (437)
..|++++.. ..+.|.+. +-...+.|+|.+-|+.+|.++.-- |. +.+. .+
T Consensus 550 ~~wek~~e~~~~~~k~d~ed-~~~~l~~gvprsrrgeiwtflA~q--------------------~~-~~~~----l~-- 601 (948)
T KOG4436|consen 550 ETWEKILERTRIKIKKDMED-LHSALRTGVPRSRRGEIWTFLAEQ--------------------HS-LNHA----LP-- 601 (948)
T ss_pred HHHHHHHHHhhhcccccHHH-HHHHHHccCchhhhHHHHHHHHHH--------------------HH-Hhcc----CC--
Confidence 589999877 23346776 555557799999999999998731 00 0000 00
Q ss_pred CCCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCC--hhhHHHHHHHH
Q 013736 121 GSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYES--ETNQAKLWDVL 198 (437)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~--~~~~~~L~~IL 198 (437)
+..++.+ ..-.+..+++.+..+.|-.|+-||||+|++|+. +.++..+.|+|
T Consensus 602 ------------~~kr~~~---------------~p~~~llkqLte~qhAi~idlgrtfp~h~~~~~qlg~gqlsl~n~L 654 (948)
T KOG4436|consen 602 ------------DKKRPPD---------------FPYKELLKQLTEQQHAILIDLGRTFPTHPYFSDQLGLGQLSLFNLL 654 (948)
T ss_pred ------------cccCCCC---------------CChHHHHHHHHHHHHHHHHhhccccCCCHHHHhhccccHHHHHHHH
Confidence 0000000 011455688889999999999999999999988 57899999999
Q ss_pred HHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhc--ccCcccCCchhhHHHHHHHHHHHHHHHCHHHHHH
Q 013736 199 AIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRL--RENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQH 276 (437)
Q Consensus 199 ~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~h 276 (437)
.+|+..+|++|||||+..||+++|+.+ +|+.||-++..||... +..|. +.+..++..++.+..+++.+.+.||+|
T Consensus 655 kayslld~e~gycqg~~fv~gvlllh~-~e~~afellk~LM~~r~~r~qy~--pdm~~lq~qmyqLsrl~hd~hrdlyn~ 731 (948)
T KOG4436|consen 655 KAYSLLDPEVGYCQGLSFVAGVLLLHM-SEENAFELLKFLMFDRGMRKQYR--PDMKKLQIQMYQLSRLLHDYHRDLYNH 731 (948)
T ss_pred HHhcccCccccccCcchhhhhhhHhhc-chhhHHHHHHHHHHHHhhHhhhc--hHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999987777 9999999999999763 44444 567789999999999999999999999
Q ss_pred HHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhccccC
Q 013736 277 LEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTG 356 (437)
Q Consensus 277 L~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (437)
++++.|.|..|+.+||+|+|+..||...+.|++|.++..|..
T Consensus 732 le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~flq~te-------------------------------------- 773 (948)
T KOG4436|consen 732 LEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFLQGTE-------------------------------------- 773 (948)
T ss_pred HHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHhhccc--------------------------------------
Confidence 999999999999999999999999999999999999987654
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCC
Q 013736 357 LPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNL 401 (437)
Q Consensus 357 ~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~ 401 (437)
.+.-+++++|..++..|++ +.++++|..+++++...+
T Consensus 774 -------vifK~a~~llsv~k~~l~e-~dn~e~i~d~~k~~~p~~ 810 (948)
T KOG4436|consen 774 -------VIFKVALSLLSVHKQLLLE-KDNFEEIVDFLKTTLPKM 810 (948)
T ss_pred -------hhhhhHHHHHHhhHHHHHh-hhhHHHHHHHHHHhhhhh
Confidence 2455888999999999988 679999999999866554
No 16
>KOG1102 consensus Rab6 GTPase activator GAPCenA and related TBC domain proteins [General function prediction only]
Probab=99.91 E-value=3.2e-24 Score=216.38 Aligned_cols=184 Identities=24% Similarity=0.442 Sum_probs=162.6
Q ss_pred hHHhhcccccCCCCcCCCC--hhhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCc
Q 013736 169 HQIGLDVVRTDRSLVFYES--ETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENF 246 (437)
Q Consensus 169 ~qI~~Dv~RT~~~~~~f~~--~~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~ 246 (437)
.+| +|+.||+|.+..|.. +.+++.+.+|+.+|+.++|++||||||..++++++.++ .|++|||+++.+|......+
T Consensus 187 ~~~-~d~~Rt~~~~~~f~~~~~~~q~sl~~vl~a~s~~~~~~gy~q~m~~~a~~ll~~~-~ee~af~~lv~l~~~~~~~~ 264 (397)
T KOG1102|consen 187 EII-RDLSRTFPAHLLFRKRYGVGQRSLYNVLKAYSLYDPEVGYCQGMSSIAAPLLLYL-PEEEAFPLLVKLMKNYGLDL 264 (397)
T ss_pred HHH-hhccCcCcchhhhhhhcCcccccccccchhhcccCCCcccccchhhHhhhhhccC-chhhhhhhhhhhhhccchhc
Confidence 456 999999999999877 46789999999999999999999999999999988777 69999999999999865444
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhc
Q 013736 247 RTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYE 326 (437)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~ 326 (437)
+ ..++.++...+..++.+++...|.++.|+...+++..+|+.+|++|+|+..+|++.+.|+||+++.+|..
T Consensus 265 ~-~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~~g~~-------- 335 (397)
T KOG1102|consen 265 L-SPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALFVEGVS-------- 335 (397)
T ss_pred c-cccCCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHHHhchH--------
Confidence 4 5677899999999999999999999999999999999999999999999999999999999999998732
Q ss_pred ccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhh-hcCCCC
Q 013736 327 SNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILAD-ITGNLD 402 (437)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~-l~~~~d 402 (437)
....++++++....+.++.. +++.+++++.. ++...|
T Consensus 336 -------------------------------------i~~~~~~~l~~~~~~~~~~~--~~e~~~~~l~~~~~~~~~ 373 (397)
T KOG1102|consen 336 -------------------------------------ILFRFSLALLKHKADDLLDL--DFESLLSYLRVDLPKSYD 373 (397)
T ss_pred -------------------------------------HHHHHHHHHhhhhhHHHhhc--cHHHHHHHHhcccHhhcC
Confidence 35668889999999999884 69999999875 444443
No 17
>KOG2221 consensus PDZ-domain interacting protein EPI64, contains TBC domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.81 E-value=5.6e-21 Score=170.46 Aligned_cols=188 Identities=21% Similarity=0.394 Sum_probs=148.1
Q ss_pred HHHHHhhccCCCc-c-HHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccC
Q 013736 44 RRWHAAFSEDGHL-D-IAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIG 121 (437)
Q Consensus 44 ~~W~~~l~~~~~i-~-~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~ 121 (437)
++|..++++.... + .-+.++--|+.|||+.+|+.+|++|.|....-. +++..|..+..+ +
T Consensus 76 skwL~mldnw~~~m~kk~~~ir~rcrkgippslr~Raw~ylsGa~~~~~----------~np~~~~~~~~~-------p- 137 (267)
T KOG2221|consen 76 SKWLHMLDNWHEEMRKKQKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPP----------KNPVVFDELGPA-------P- 137 (267)
T ss_pred HHHHHHHHHHHHHHHhccccccchhhcCCCcccchhHHHhhcCCCCCCC----------CCcchhhhccCC-------C-
Confidence 4788887762211 1 112355557889999999999999999854322 122333322111 1
Q ss_pred CCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCC--hhhHHHHHHHHH
Q 013736 122 SGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYES--ETNQAKLWDVLA 199 (437)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~--~~~~~~L~~IL~ 199 (437)
.+|. ..+.|.+|+.|-||+|..|.. +.++..|.|+|.
T Consensus 138 -----------------G~p~------------------------t~e~i~kdl~rqfp~hemf~s~~k~gkqelfr~lk 176 (267)
T KOG2221|consen 138 -----------------GDPK------------------------TAEGIHKDLHRQFPFHEMFGSSGKTGKQELFRVLK 176 (267)
T ss_pred -----------------CCCc------------------------chhhhccccccCCCcccccccccccchHHHHHHHH
Confidence 1111 367899999999999999976 467999999999
Q ss_pred HHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHCHHHHHHHHh
Q 013736 200 IYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLED 279 (437)
Q Consensus 200 ~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~P~L~~hL~~ 279 (437)
+|..++|+.||||+-.-|+++++..+ .+.+|||||+.+.+++.+.|+ ..++..++.+-.++..|+++.+|..|.||..
T Consensus 177 a~ti~~pe~g~cq~qapiaa~llmhm-p~rdaf~~~vqicekylqgy~-~sgleaiq~dg~il~~Llkk~~~p~~rH~~~ 254 (267)
T KOG2221|consen 177 AYTIYKPEEGYCQAQAPIAAVLLMHM-PARDAFWCFVQICEKYLQGYY-SSGLEAIQNDGGILEGLLKKASPPPYRHLGG 254 (267)
T ss_pred HHHHhCchhhhhhhhchHHHHHHhcc-cHHHHHHHHHHHHHHHccccc-ccchhhhhcccHHHHHHHHhcCCCCCccccc
Confidence 99999999999999999999866555 899999999999999887776 3567788888999999999999999999999
Q ss_pred CCCCccchhhhHH
Q 013736 280 LDGGEYLFAFRML 292 (437)
Q Consensus 280 ~~i~~~~~~~~Wf 292 (437)
.++++..|...||
T Consensus 255 ~kvdp~lym~ewF 267 (267)
T KOG2221|consen 255 DKVDPLLYMTEWF 267 (267)
T ss_pred CCCCHHHhhhccC
Confidence 9999999999997
No 18
>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]
Probab=99.64 E-value=3.1e-15 Score=146.05 Aligned_cols=177 Identities=18% Similarity=0.292 Sum_probs=143.6
Q ss_pred hHHHHHHHHHHHhHhcCCCcccC--ChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHH
Q 013736 190 NQAKLWDVLAIYSWVDNDIGYVQ--GMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIR 267 (437)
Q Consensus 190 ~~~~L~~IL~~y~~~~p~igY~Q--Gm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~ 267 (437)
....|..++.-|+. +.++.|.. |.-.+.-+++.+-.+..+.|-||..+++++.+.-....+ ..++.|+-||+
T Consensus 91 vv~dlES~iTfYCK-~Rn~~Y~~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPkdcrpkg-----~~Fh~FRLLlq 164 (669)
T KOG3636|consen 91 VVSDLESFITFYCK-KRNMDYIKDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPKDCRPKG-----QIFHLFRLLLQ 164 (669)
T ss_pred hhHhhhhHhhhhhh-ccCCcccccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCCCCCCCC-----ccchHHHHHHH
Confidence 34567778877765 44566766 455777888888788999999999999997665443332 24789999999
Q ss_pred HHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhch
Q 013736 268 TIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGK 347 (437)
Q Consensus 268 ~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (437)
.++|+|..||+...++|.+|+..||-+||+...+.+.+.-+||.++-.+...
T Consensus 165 YHdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF---------------------------- 216 (669)
T KOG3636|consen 165 YHDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPF---------------------------- 216 (669)
T ss_pred hcCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCce----------------------------
Confidence 9999999999999999999999999999999999999999999999765432
Q ss_pred hhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHhhhcCCC---CHHHHHHHHHHHHHH
Q 013736 348 FERKNVKTGLPDKTSALSVFLVASVLETKNKKLLRE-AKGLDDVVKILADITGNL---DAKKACNEALKIQKK 416 (437)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~-~~~~~~i~~~l~~l~~~~---d~~~ll~~A~~l~~~ 416 (437)
+++|+++.||...|+.||+. ..+-++++++|.++|..+ |+..+++.|.....|
T Consensus 217 ----------------~vffLaliiLiNake~ILq~~sdsKEe~ikfLenmp~~L~~eDvpDffsLAqyY~~K 273 (669)
T KOG3636|consen 217 ----------------LVFFLALIILINAKEEILQVKSDSKEEAIKFLENMPAQLSVEDVPDFFSLAQYYSDK 273 (669)
T ss_pred ----------------ehHHHHHHHhcccHHHHhhhccccHHHHHHHHHcCchhcccccchhHHHHHHHHhhc
Confidence 35667888999999999883 336788999999999777 888889998876443
No 19
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.55 E-value=4e-14 Score=146.89 Aligned_cols=233 Identities=16% Similarity=0.181 Sum_probs=185.3
Q ss_pred HHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCccccccccccCCCccCC
Q 013736 61 VLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDGQSLQD 140 (437)
Q Consensus 61 l~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (437)
.++..+.+|+|+..|..+|+.++..- +.. + ..-.+.|.++.....-
T Consensus 176 ~l~e~Ve~~~p~~frli~~qlLssat--d~~-----q--~~I~e~~sdl~~~s~~------------------------- 221 (948)
T KOG4436|consen 176 KLKELVEGGIPMHFRLIRWQLLSSAT--DRE-----Q--ALIFEDYSDLAPCSSQ------------------------- 221 (948)
T ss_pred hhHHHHhcCCchHHHHHHHHHhcccc--cch-----h--hHHHHHHHHHhhhcch-------------------------
Confidence 46778899999999999999999852 111 1 1223556655543100
Q ss_pred CCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCChh---------hHHHHHHHHHHHhHhcCCCccc
Q 013736 141 SNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESET---------NQAKLWDVLAIYSWVDNDIGYV 211 (437)
Q Consensus 141 p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~---------~~~~L~~IL~~y~~~~p~igY~ 211 (437)
.+++ .++--|..|+.||++.|.+|...+ +++.|+|+..+|+...-++|||
T Consensus 222 ----------------~Ek~-----~~~~~Irrdi~~~~~eh~~fke~~s~~~~~~~~~~d~LfN~~K~~~~~~~E~ifs 280 (948)
T KOG4436|consen 222 ----------------QEKE-----LHIGIIRRDIERTYPEHYFFKEQSSTVCSDIRFAQDQLFNVAKAYSTKDLEVIFS 280 (948)
T ss_pred ----------------hhhh-----HHHHHHHHHhhccCcceeeeccCccCCcchhHHHHHHHHHHHHHHhhhhhhhhhc
Confidence 0111 245679999999999999998742 5899999999999999999999
Q ss_pred CChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHCH-HHHHHHHhCCCCccchhhh
Q 013736 212 QGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDP-KLHQHLEDLDGGEYLFAFR 290 (437)
Q Consensus 212 QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~P-~L~~hL~~~~i~~~~~~~~ 290 (437)
||=+.+++.+++.. +++.+|-.++.+|..++..-.+++.+..+-..+..++...+...| .|+.|+.+.+++.++|...
T Consensus 281 qGs~~m~Gll~l~~-~~E~assv~~~lm~~~rl~~l~kpe~~~l~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs 359 (948)
T KOG4436|consen 281 QGSAFMVGLLLLQM-PVEEASSVKVQLMILYRLRELSKPEMEPLGLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARS 359 (948)
T ss_pred cchHHHHHHHHhcC-cHHHHHHHHHHHHHhhcccccCCcccchhHHHHHhhcccccccchhHHhhcccccCCCccHHHHH
Confidence 99999999655555 999999999999998776666677777888888999999999999 9999999999999999999
Q ss_pred HHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhhhccccCCCCCCchHHHHHHH
Q 013736 291 MLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVA 370 (437)
Q Consensus 291 WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 370 (437)
||++.|...+|+....|+.|.+.+.|.. +...+.+
T Consensus 360 ~flt~~ltt~Pi~~a~r~~~~f~~egll---------------------------------------------k~fr~~i 394 (948)
T KOG4436|consen 360 WFLTNFLTTFPIFMAARISDTFSSEGLL---------------------------------------------KRFRDSI 394 (948)
T ss_pred HHHHhhcccCchhhccccccccccccHH---------------------------------------------HHHhhhH
Confidence 9999999999999999999999987642 2335677
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHh
Q 013736 371 SVLETKNKKLLREAKGLDDVVKILA 395 (437)
Q Consensus 371 ail~~~~~~ll~~~~~~~~i~~~l~ 395 (437)
|++...++.-+. ..|++.+.+.+.
T Consensus 395 a~~~~~~d~~~~-s~D~EG~~~~~q 418 (948)
T KOG4436|consen 395 AYLHQLRDIELE-SLDMEGMLSYFQ 418 (948)
T ss_pred HHHHHHhhhhhh-ccCccccccchh
Confidence 888444444444 568888888876
No 20
>KOG1648 consensus Uncharacterized conserved protein, contains RUN, BRK and TBC domains [General function prediction only]
Probab=99.33 E-value=1.3e-13 Score=136.19 Aligned_cols=280 Identities=23% Similarity=0.356 Sum_probs=203.9
Q ss_pred ccccccCCCCCcHHHHHHhhccCCCccHHHHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013736 31 VRFKARAGKTLSARRWHAAFSEDGHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWK 110 (437)
Q Consensus 31 ~~~~~~~~~~l~~~~W~~~l~~~~~i~~~kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~ 110 (437)
+..++.++..+|++-|.++..+ ..+..-.+++...+||+...+|+.+|+.+++.+...+...+-+.........|..-.
T Consensus 521 pD~pcda~~glt~~~W~qy~~d-~t~~e~~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d~~e~~~s~~y~~~l 599 (813)
T KOG1648|consen 521 PDDPCDASAGLTEKFWKQYRAD-PTIEEWRVLEAEVRGRDEEAFRAARAPKAASPVREGSCDVFEDPNEPTCSQHYDRNL 599 (813)
T ss_pred CCCCCCccccccHHHHHHHhcC-CchHHHHHHHHHHhcccHHHHhhcccccccccccccccchhcCCCccHHHHHHHHHH
Confidence 3455788899999999999755 466556678899999999999999999999987766654433333344455565443
Q ss_pred HHhhhhccccCCCccccccccccCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhcccccCCCCcCCCChhh
Q 013736 111 TECQNIVPIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETN 190 (437)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~d~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~ 190 (437)
-.|.. .....|++|+.|...+..+|+.+.+
T Consensus 600 ~~~~~--------------------------------------------------~~~~~~~kd~e~~~~~~~~fs~~~~ 629 (813)
T KOG1648|consen 600 ITLFR--------------------------------------------------ANLHRIDKDVERCDRNLMFFSNKDN 629 (813)
T ss_pred HHHHh--------------------------------------------------hheeeecchhhhCcchheeecCCcc
Confidence 33322 2357799999999999999999988
Q ss_pred HHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcccCcccCCchhhHHHHHHHHHHHHHHHC
Q 013736 191 QAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTID 270 (437)
Q Consensus 191 ~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lL~~~~ 270 (437)
.+. +++...|...+-+-||.|||.++.+|++..+++|.-+--||.-+|-+-+..|..-+ ++...+-.+. +++..+
T Consensus 630 les-~~~~~~~~~~~l~~~~~~~~~dl~~p~~~~~ed~~~~~e~~s~~~~~q~~~~~q~~---~~~~~l~~~r-~~~v~~ 704 (813)
T KOG1648|consen 630 LES-RRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDEALTLECFSLLMLRQRGKFPQRP---GMSKCLLNLR-LIQVVD 704 (813)
T ss_pred hhh-heeeeeeeccccccccccchhhccCCcCCChhhcccccCCCcHHHHHhcccCCCCC---Cccccccccc-chhhhc
Confidence 888 88888899989899999999999999999999888877788777766555554222 3333333333 555566
Q ss_pred HHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhhh
Q 013736 271 PKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFER 350 (437)
Q Consensus 271 P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (437)
|-. .-++. ..-..++||+.-|.++++.+....+|.++++.....
T Consensus 705 ~l~-s~id~----~qa~~f~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~------------------------------- 748 (813)
T KOG1648|consen 705 PLI-SDIDY----AQALSFRWFLLDFKRELSYECTYKVWEVIWAAQRLR------------------------------- 748 (813)
T ss_pred chh-cchhh----hhhcceeeeccCcccccCCCCcceeeEeeccccccc-------------------------------
Confidence 621 11211 224559999999999999999999999999754321
Q ss_pred hccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCCHHHHHHHHHH
Q 013736 351 KNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALK 412 (437)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~d~~~ll~~A~~ 412 (437)
.+..|.+|+..|. ....+.++...-+..+++++++.....-|-+.++.-|..
T Consensus 749 ---------~~~~~~i~~g~~~-~~~~~~~~t~~~~~t~~i~~~~~~~e~~~c~r~~~~~~~ 800 (813)
T KOG1648|consen 749 ---------ITDDFAIFFGLAT-TNYHDVLITNNFDYTDMIKFFNEMAERHDCSRLLSSART 800 (813)
T ss_pred ---------cCcchhhhhhhHH-HhhHHHHhhcccchHHHHHHHHHHHhhhhhHHHHhcCcc
Confidence 1234688888887 555666666567888899999988866666666555444
No 21
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.75 E-value=2.2e-07 Score=87.39 Aligned_cols=182 Identities=12% Similarity=0.142 Sum_probs=137.3
Q ss_pred hhhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHHHHHHHhhcc-cCcccCCchhhHHHHHHHHHHHH
Q 013736 188 ETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLR-ENFRTNTGMIGVQSQLSTLSQII 266 (437)
Q Consensus 188 ~~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~lL 266 (437)
..+....+.||.+.++..|++.||..+..+++.++...-+|+++|---++++.--. ..-..+.++......+..|..++
T Consensus 108 argegavrkilKOGanqfpdisfcpalpavvalllhysideaecfekacrilacndpgrrlidqsflafesscmtfgdlv 187 (559)
T KOG2801|consen 108 ARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLV 187 (559)
T ss_pred CcCchhHHHHHHHHhccCCCcccCcchHHHHHHHHHhcccHHHHHHHhheeeeecCcchhhhhhHHHHHHhhhhhHHHHH
Confidence 34556788999999999999999999999999888888899999887777764321 11122445556777888999999
Q ss_pred HHHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhc
Q 013736 267 RTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCG 346 (437)
Q Consensus 267 ~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (437)
.+++-.-++.+....-+.......|-.-+|. ++|+-...|++|+|+.+|+.
T Consensus 188 nkycqaahklmvavsedvlqvyadwqrwlfg-elplcyfarvfdvflvegyk---------------------------- 238 (559)
T KOG2801|consen 188 NKYCQAAHKLMVAVSEDVLQVYADWQRWLFG-ELPLCYFARVFDVFLVEGYK---------------------------- 238 (559)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-cchHHHHHHHhhheeecchH----------------------------
Confidence 9999888887766544444555677766664 68999999999999999874
Q ss_pred hhhhhccccCCCCCCchHHHHHHHHHHHHHHHHH----HHhcCChHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Q 013736 347 KFERKNVKTGLPDKTSALSVFLVASVLETKNKKL----LREAKGLDDVVKILADITGNLDAKKACNEALKIQK 415 (437)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~l----l~~~~~~~~i~~~l~~l~~~~d~~~ll~~A~~l~~ 415 (437)
.+..+++|||....+.- |+...--.+|-.+..++.+....++++.+|..++.
T Consensus 239 -----------------vlyrvalailkffhkvragqplesdsvkqdirtfvrdiaktvspekllekafairl 294 (559)
T KOG2801|consen 239 -----------------VLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVSPEKLLEKAFAIRL 294 (559)
T ss_pred -----------------HHHHHHHHHHHHHHHhhcCCCCccchHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 25557888887655432 33333345677788899989999999999887763
No 22
>PF14961 BROMI: Broad-minded protein
Probab=97.03 E-value=0.019 Score=64.31 Aligned_cols=120 Identities=10% Similarity=0.138 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCcc
Q 013736 258 QLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQV 337 (437)
Q Consensus 258 ~~~~l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~ 337 (437)
.++.++.+|+...|.++.-|.-.|..+...+.+|+.-+|=+-+++..++...=..+..|.+
T Consensus 1166 ~~~~vE~ll~~E~P~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G~d------------------- 1226 (1296)
T PF14961_consen 1166 SCHYVEMLLKAELPLVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYGPD------------------- 1226 (1296)
T ss_pred HHHHHHHHHHhhccHHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcCcc-------------------
Confidence 5689999999999999999999999999999999999999999999988887777777654
Q ss_pred chhhhhhhchhhhhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhc-CCCCHHHHHHHHHHHHHH
Q 013736 338 NDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADIT-GNLDAKKACNEALKIQKK 416 (437)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~-~~~d~~~ll~~A~~l~~~ 416 (437)
|.+|+|+|+++...+.||... -..++..+++.-+ ....+.+-+.--..|..+
T Consensus 1227 --------------------------yqvY~~VailkHlq~~ilq~~-q~q~L~~flke~~l~gF~~~~~~~yM~~Le~~ 1279 (1296)
T PF14961_consen 1227 --------------------------YQVYICVAILKHLQPEILQHT-QTQDLQVFLKEEALRGFRVSDYLEYMENLEQR 1279 (1296)
T ss_pred --------------------------ceeehhHHHHHHhhHHHHHhh-hhchHHHHhhhccccceeHHhHHHHHHHHHHH
Confidence 589999999999999999954 4444566666432 355777777777788888
Q ss_pred HHhhhhh
Q 013736 417 YLSKVLF 423 (437)
Q Consensus 417 ~~~~~~~ 423 (437)
|.+.+-.
T Consensus 1280 yR~~vL~ 1286 (1296)
T PF14961_consen 1280 YRPRVLT 1286 (1296)
T ss_pred hHhHHHH
Confidence 8877654
No 23
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=82.63 E-value=0.44 Score=47.83 Aligned_cols=194 Identities=19% Similarity=0.293 Sum_probs=98.2
Q ss_pred CcccCChhhHHHHHHHhccCHHHHHHHHHHHHh-hcccCccc----CCchhhHHHHHHH-----HHHHHHHHC---HHHH
Q 013736 208 IGYVQGMNDICSPMIVLLENEADAFWCFEHTMR-RLRENFRT----NTGMIGVQSQLST-----LSQIIRTID---PKLH 274 (437)
Q Consensus 208 igY~QGm~~Iaa~ll~~~~~E~~aF~~f~~l~~-~~~~~~~~----~~~~~~~~~~~~~-----l~~lL~~~~---P~L~ 274 (437)
+|..|||++++|++|.-..+|.++||||+.+|. .+...--. +.++.-++..+.. .++|.+... --|+
T Consensus 566 vglmqgmsdlvapilaevldesdtfwcfvglmqna~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellf 645 (781)
T KOG2224|consen 566 VGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLF 645 (781)
T ss_pred hhhhccchhhhhhHHHhhhccccchhhhhhhhcceEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHH
Confidence 688899999999999999999999999999997 42111111 2222222222221 222222211 1122
Q ss_pred HH--HH---hCCCCccchhhhHHHHhccccCChhhHHHHHHHHhcccCCCCchhhhcccCCCCCCCccchhhhhhhchhh
Q 013736 275 QH--LE---DLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFE 349 (437)
Q Consensus 275 ~h--L~---~~~i~~~~~~~~WfltlF~~~lp~~~vlriWD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (437)
-| |- +..+ +..-+.+.+-.+.++-+. +-+.++ ++-..- -+-+-+++.+.-++++++..+|++
T Consensus 646 chrwlllcfkref-~ea~airiweacwa~y~t--dyfhlf---iclaii------aiy~ddvi~q~l~~demllhf~nl- 712 (781)
T KOG2224|consen 646 CHRWLLLCFKREF-PEAEAIRIWEACWAHYLT--DYFHLF---ICLAII------AIYADDVIAQNLAPDEMLLHFGNL- 712 (781)
T ss_pred HHHHHHHHhhhcc-cHHHHHHHHHHHHHHhhH--HHHHHH---HHHHHH------HHhhhHHHHhhcCchhHHHhhhhh-
Confidence 22 11 2222 223333433333333221 111111 110000 000014456677788777777776
Q ss_pred hhccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCC-CHHHHHHHHHHHHHHHHhhhhhc--CC
Q 013736 350 RKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNL-DAKKACNEALKIQKKYLSKVLFI--FP 426 (437)
Q Consensus 350 ~~~~~~~~~~~~~~~~l~~~~ail~~~~~~ll~~~~~~~~i~~~l~~l~~~~-d~~~ll~~A~~l~~~~~~~~~~~--~~ 426 (437)
.+....+-||+.+++.---.+.|.++|..+ |+.+++.-.+.-. ...+.+++. ++
T Consensus 713 ----------------------am~mdgelilrkar~ll~qfr~lpkipcsl~~lck~cg~gmwds-~~~palectgh~~ 769 (781)
T KOG2224|consen 713 ----------------------AMHMDGELILRKARGLLHQFRLLPKIPCSLHDLCKLCGPGMWDS-EHMPALECTGHHD 769 (781)
T ss_pred ----------------------hhhcCchhhHHHHHHHHHHHhhcCCCCccHHHHHHhcCCCccCc-CCCcceeecCCCC
Confidence 233344444554444433456677777654 5555544444332 345566764 88
Q ss_pred CCCCccccccC
Q 013736 427 LSDSCTYLFLI 437 (437)
Q Consensus 427 ~~~~~~~~~~~ 437 (437)
-.++|+|-+-|
T Consensus 770 g~e~c~~~gti 780 (781)
T KOG2224|consen 770 GDEKCPLGGTI 780 (781)
T ss_pred CcccCCCCCcC
Confidence 89999997644
No 24
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=77.30 E-value=1.3 Score=46.54 Aligned_cols=76 Identities=28% Similarity=0.448 Sum_probs=61.5
Q ss_pred CcHHHHHHhhccCCCccHH-HHHHHHHhCCCCCCcHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 013736 41 LSARRWHAAFSEDGHLDIA-KVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIV 117 (437)
Q Consensus 41 l~~~~W~~~l~~~~~i~~~-kl~k~l~~~GIp~~~R~~vW~~LLg~~~~~~t~~~~~~~~~~~~~~Y~~l~~~~~~~~ 117 (437)
++.++|.....++++++.. ........+|+-..+|+.+|+.++++++++.+..++...... ...|...+.+|....
T Consensus 148 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~qW~~~~ 224 (488)
T KOG2197|consen 148 LTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKL-TDEYFRLKLQWSSTS 224 (488)
T ss_pred chhhhhhhhhhhccccccchhhhheecccccccchhhhhhhhhhcccCcccccccccccccc-cccHhhhhhhheecc
Confidence 7889999998887776422 223477788887799999999999999999998887777777 889999999996543
No 25
>PF10815 ComZ: ComZ; InterPro: IPR024558 ComZ, which contains a leucine zipper motif, negatively regulates transcription of the ComG operon [].
Probab=33.62 E-value=69 Score=22.71 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=33.4
Q ss_pred HHHHHHHHCHHHHHHHHhCCCCccchhhhHHHHhccccC
Q 013736 262 LSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREF 300 (437)
Q Consensus 262 l~~lL~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~l 300 (437)
|..+--++.|+--..|++.||+.++-.++-|++||+++.
T Consensus 6 FmqIaMK~lPEak~~L~k~GIeLsme~~qP~m~L~~~VM 44 (56)
T PF10815_consen 6 FMQIAMKYLPEAKEELDKKGIELSMEMLQPLMQLLTKVM 44 (56)
T ss_pred HHHHHHHHhHHHHHHHHHcCccCCHHHHHHHHHHHHHHH
Confidence 455667788999999999999999999999999998764
No 26
>KOG2141 consensus Protein involved in high osmolarity signaling pathway [Signal transduction mechanisms]
Probab=26.58 E-value=3.7e+02 Score=29.64 Aligned_cols=65 Identities=11% Similarity=0.022 Sum_probs=31.5
Q ss_pred HhHHhhcccccCCCCcCCCCh-hhHHHHHHHHHHHhHhcCCCcccCChhhHHHHHHHhccCHHHHHHH
Q 013736 168 LHQIGLDVVRTDRSLVFYESE-TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWC 234 (437)
Q Consensus 168 ~~qI~~Dv~RT~~~~~~f~~~-~~~~~L~~IL~~y~~~~p~igY~QGm~~Iaa~ll~~~~~E~~aF~~ 234 (437)
+..|..++.+.+.+++-+... .....+.+++..+.... -|.|+-...+++.+.....+|..|++.
T Consensus 335 i~~I~~~i~~Ly~~~sr~~v~~sLtk~l~~~~~~~~~~l--d~~~~~y~AL~~~l~~~vg~eigahf~ 400 (822)
T KOG2141|consen 335 IIKIIAGIAELYMNNSRYDVTSSLTKLLLKALLGPFRLL--DSLLTTYAALAAMLHTMVGNEIGAHFL 400 (822)
T ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 566788888777554433222 12222233332222211 134444445666666566666666654
No 27
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=25.28 E-value=47 Score=19.88 Aligned_cols=13 Identities=38% Similarity=0.751 Sum_probs=9.9
Q ss_pred CcccCChhhHHHH
Q 013736 208 IGYVQGMNDICSP 220 (437)
Q Consensus 208 igY~QGm~~Iaa~ 220 (437)
-||+||+.+..--
T Consensus 3 sgyiqgipdflkg 15 (31)
T PF08109_consen 3 SGYIQGIPDFLKG 15 (31)
T ss_pred cccccccHHHHHH
Confidence 4899998887654
Done!