BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013739
MPEGNAPAAQPNGPQAAGLPNQTTTLAPSLLAPPSSPASFTNSALPSTAQSPSCFLSLSA
NSPGGPSSTMFATGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPELAHLTTPSSPDVPFA
RFLTSSMDLNGTDKANYIAANDLQATYSLYPGSPPSSLISPISRTSGECLSSSFPEREFP
PQWDPTVSPQNGKYSRSGSGRLYTHDTTGGSRVSQDTNFFCPATFAQFYLDHDSPFPHTG
GRLSVSKDSDVYPNGANGNQNRHTKSPKQDVEELEAYRASFGFSADEIITTPQYVEITDV
MDDSFTMMPFTSDKPAFEESLPASMDGQKPQGRESNLLNPKNLKSDSDLMNGGIHHELTE
SSDGCEDNKPKRQSGDVSGASTPGNQVLTDEEDIFSKMRTSRNSRKYHQGLSCSDAEIDY
RRGRSLREGKGDFSWHG

High Scoring Gene Products

Symbol, full name Information P value
AT1G76660 protein from Arabidopsis thaliana 1.3e-94
AT5G52430 protein from Arabidopsis thaliana 8.4e-21
AT1G63720 protein from Arabidopsis thaliana 9.2e-18
AT4G25620 protein from Arabidopsis thaliana 2.3e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013739
        (437 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030066 - symbol:AT1G76660 "AT1G76660" species...   506  1.3e-94   2
TAIR|locus:2156712 - symbol:AT5G52430 "AT5G52430" species...   262  8.4e-21   1
TAIR|locus:2026664 - symbol:AT1G63720 species:3702 "Arabi...   234  9.2e-18   1
TAIR|locus:2131819 - symbol:AT4G25620 "AT4G25620" species...   235  2.3e-17   1


>TAIR|locus:2030066 [details] [associations]
            symbol:AT1G76660 "AT1G76660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC010718
            EMBL:AK117141 EMBL:BT005378 IPI:IPI00535002 PIR:H96794
            RefSeq:NP_177792.1 UniGene:At.43714 UniGene:At.67770 PRIDE:Q9SRE5
            EnsemblPlants:AT1G76660.1 GeneID:843999 KEGG:ath:AT1G76660
            TAIR:At1g76660 eggNOG:NOG263395 HOGENOM:HOG000237404
            InParanoid:Q9SRE5 OMA:RNRIHAD PhylomeDB:Q9SRE5
            ProtClustDB:CLSN2682781 Genevestigator:Q9SRE5 Uniprot:Q9SRE5
        Length = 431

 Score = 506 (183.2 bits), Expect = 1.3e-94, Sum P(2) = 1.3e-94
 Identities = 112/192 (58%), Positives = 135/192 (70%)

Query:   184 DPTVSPQNGKYSRSGSGRLYTHDTTGGSRVSQDTNFFCPATFAQFYLDHDSPFPHTGGRL 243
             D  +SPQNGK SRS SG  + +DT G S   Q++NFFCP TFA+FYLDHD   P  GGRL
Sbjct:   203 DGLLSPQNGKCSRSDSGNTFGYDTNGVSTPLQESNFFCPETFAKFYLDHDPSVPQNGGRL 262

Query:   244 SVSKDSDVYP-NG-ANGNQNRHTKSPKQDVEELEAYRASFGFSADEIITTPQYVEITDVM 301
             SVSKDSDVYP NG  NGNQNR  +SPKQD+EELEAYRASFGFSADEIITT QYVEITDVM
Sbjct:   263 SVSKDSDVYPTNGYGNGNQNRQNRSPKQDMEELEAYRASFGFSADEIITTSQYVEITDVM 322

Query:   302 DDSFTMMPFTSDKPAFEESLPASMDGQKPQGRESNLLNPKNLKSDSDLMNGGIHHELTES 361
             D SF     TS   A+  S     DGQK   RE+NLL+  + KS++DL +  +  +  +S
Sbjct:   323 DGSFN----TS---AYSPS-----DGQKLLRREANLLSQTSPKSEADLDSQVVDFQSPKS 370

Query:   362 SDGCEDNKPKRQ 373
             S+  +D+K + +
Sbjct:   371 SNSYKDHKQRNR 382

 Score = 455 (165.2 bits), Expect = 1.3e-94, Sum P(2) = 1.3e-94
 Identities = 87/106 (82%), Positives = 95/106 (89%)

Query:    40 FTNSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSTFTTEPSTAP 99
             FTNSALPST QSP+C+LSL+ANSPGGPSS+M+ATGPYAHETQLVSPPVFSTFTTEPSTAP
Sbjct:    78 FTNSALPSTTQSPNCYLSLAANSPGGPSSSMYATGPYAHETQLVSPPVFSTFTTEPSTAP 137

Query:   100 LTPPPELAHLTTPSSPDVPFARFLTSSMDLNGTDKANYIAANDLQA 145
              TPPPELA LT PSSPDVP+ARFLTSSMDL  + K +Y   NDLQA
Sbjct:   138 FTPPPELARLTAPSSPDVPYARFLTSSMDLKNSGKGHY---NDLQA 180

 Score = 165 (63.1 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
 Identities = 42/115 (36%), Positives = 68/115 (59%)

Query:   316 AFEESLPASMDGQKPQGRESNLLNPKNLKSDSDLMNGGIHHELTESSDGCEDNKPKRQSG 375
             +F  S  +  DGQK   RE+NLL+  + KS++DL +  +  +  +SS+  +D+K +    
Sbjct:   325 SFNTSAYSPSDGQKLLRREANLLSQTSPKSEADLDSQVVDFQSPKSSNSYKDHKQR---- 380

Query:   376 DVSGASTPGNQVLTDEEDIFSKMRTSRNSRKYHQGLSCSDAEIDYRRGRSLREGK 430
                      N++  DEE + S++ + + SR YH  +S SDAE++YRRGRSLRE +
Sbjct:   381 ---------NRIHADEEALLSRVGSVKGSRSYH--ISSSDAEVEYRRGRSLRESR 424


>TAIR|locus:2156712 [details] [associations]
            symbol:AT5G52430 "AT5G52430" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB019226
            HOGENOM:HOG000077478 ProtClustDB:CLSN2686092 EMBL:BT011246
            EMBL:BT020328 EMBL:AK229388 IPI:IPI00533822 RefSeq:NP_200056.1
            UniGene:At.69935 UniGene:At.8914 EnsemblPlants:AT5G52430.1
            GeneID:835319 KEGG:ath:AT5G52430 TAIR:At5g52430 eggNOG:NOG284788
            InParanoid:Q9FHB7 OMA:HAMDHRV PhylomeDB:Q9FHB7
            Genevestigator:Q9FHB7 Uniprot:Q9FHB7
        Length = 438

 Score = 262 (97.3 bits), Expect = 8.4e-21, P = 8.4e-21
 Identities = 57/100 (57%), Positives = 70/100 (70%)

Query:    40 FTNSALPSTAQSPSCFLSLSAN--SPGGPSSTMFATGPYAHETQLVSPPVFSTFTTEPST 97
             F  S   S + SP   LSL++N  SP  P S +F  GPYA+ETQ V+PPVFS F TEPST
Sbjct:    97 FLQSDPSSVSHSPVGPLSLTSNTFSPKEPQS-VFTVGPYANETQPVTPPVFSAFITEPST 155

Query:    98 APLTPPPELA-HLTTPSSPDVPFARFLTSSMDLNGTDKAN 136
             AP TPPPE + H+TTPSSP+VPFA+ LTSS++L   D  +
Sbjct:   156 APYTPPPESSVHITTPSSPEVPFAQLLTSSLELTRRDSTS 195


>TAIR|locus:2026664 [details] [associations]
            symbol:AT1G63720 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0007165 "signal
            transduction" evidence=RCA] [GO:0009414 "response to water
            deprivation" evidence=RCA] [GO:0009723 "response to ethylene
            stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
            evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
            evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
            stimulus" evidence=RCA] [GO:0009755 "hormone-mediated signaling
            pathway" evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            HOGENOM:HOG000077478 EMBL:AF370335 EMBL:AF428370 EMBL:AY062993
            IPI:IPI00524566 RefSeq:NP_564816.1 UniGene:At.18166 STRING:Q93W23
            EnsemblPlants:AT1G63720.1 GeneID:842676 KEGG:ath:AT1G63720
            TAIR:At1g63720 eggNOG:NOG244695 InParanoid:Q93W23 OMA:DADHVIR
            PhylomeDB:Q93W23 ProtClustDB:CLSN2917373 ArrayExpress:Q93W23
            Genevestigator:Q93W23 Uniprot:Q93W23
        Length = 358

 Score = 234 (87.4 bits), Expect = 9.2e-18, P = 9.2e-18
 Identities = 51/91 (56%), Positives = 62/91 (68%)

Query:    40 FTNSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSTFTTEPSTAP 99
             F  S  PS  QSP   LS S   P     ++FA GPYAHETQLVSPPVFST+TTEPS+AP
Sbjct:   102 FFQSEPPSATQSPVGILSFSP-LPCNNRPSIFAIGPYAHETQLVSPPVFSTYTTEPSSAP 160

Query:   100 LTPPPELAHL----TTPSSPDVPFARFLTSS 126
             +TPP + + +    TTPSSP+VPFA+   S+
Sbjct:   161 ITPPLDDSSIYLTTTTPSSPEVPFAQLFNSN 191


>TAIR|locus:2131819 [details] [associations]
            symbol:AT4G25620 "AT4G25620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 EMBL:BT005365 EMBL:AK117334
            IPI:IPI00537920 RefSeq:NP_194292.2 UniGene:At.32244
            UniGene:At.69894 EnsemblPlants:AT4G25620.1 GeneID:828667
            KEGG:ath:AT4G25620 TAIR:At4g25620 HOGENOM:HOG000077478
            InParanoid:Q8GYX5 OMA:RSEWWAN PhylomeDB:Q8GYX5
            ProtClustDB:CLSN2686092 Genevestigator:Q8GYX5 Uniprot:Q8GYX5
        Length = 449

 Score = 235 (87.8 bits), Expect = 2.3e-17, P = 2.3e-17
 Identities = 53/91 (58%), Positives = 63/91 (69%)

Query:    40 FTNSALPSTAQSPSCFL--SLSANSPGGPSSTMFATGPYAHETQLVSPPVFSTFTTEPST 97
             F  S  PS + +P   L  SL+ N P  PS+  F  GPYAHETQ V+PPVFS FTTEPST
Sbjct:    97 FLPSGPPSASHTPDPGLLCSLTVNEP--PSA--FTIGPYAHETQPVTPPVFSAFTTEPST 152

Query:    98 APLTPPPELAHLTTPSSPDVPFARFLTSSMD 128
             AP TPPPE     +PSSP+VPFA+ LTSS++
Sbjct:   153 APFTPPPE-----SPSSPEVPFAQLLTSSLE 178


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.128   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      437       383   0.00091  117 3  11 23  0.49    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  252 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  42.32u 0.19s 42.51t   Elapsed:  00:00:02
  Total cpu time:  42.32u 0.19s 42.51t   Elapsed:  00:00:02
  Start:  Tue May 21 04:39:19 2013   End:  Tue May 21 04:39:21 2013

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