Query 013743
Match_columns 437
No_of_seqs 117 out of 1468
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:17:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013743.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013743hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 8.6E-95 2.9E-99 761.2 43.0 435 1-436 110-547 (547)
2 1iok_A Chaperonin 60; chaperon 100.0 7.4E-96 3E-100 769.7 34.1 435 1-436 111-545 (545)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 1.2E-93 4E-98 751.0 39.0 421 1-424 110-530 (546)
4 1we3_A CPN60(groel); chaperoni 100.0 2.2E-92 7.6E-97 743.7 46.0 432 1-437 110-543 (543)
5 3aq1_B Thermosome subunit; gro 100.0 1.1E-78 3.6E-83 635.8 37.2 376 1-437 69-496 (500)
6 3ruv_A Chaperonin, CPN; double 100.0 2.3E-78 7.8E-83 638.7 37.1 377 1-436 115-543 (543)
7 1a6d_A Thermosome (alpha subun 100.0 7.1E-76 2.4E-80 619.9 36.4 375 1-436 118-543 (545)
8 3p9d_C T-complex protein 1 sub 100.0 1.7E-76 5.7E-81 626.7 30.8 389 1-418 116-589 (590)
9 1q3q_A Thermosome alpha subuni 100.0 2.2E-75 7.5E-80 616.6 39.0 361 1-420 119-530 (548)
10 3ko1_A Chaperonin; 9-fold symm 100.0 4.1E-74 1.4E-78 606.5 37.1 363 1-422 126-540 (553)
11 1a6d_B Thermosome (beta subuni 100.0 6.6E-73 2.3E-77 597.5 36.9 363 1-422 117-530 (543)
12 3iyg_B T-complex protein 1 sub 100.0 3.2E-72 1.1E-76 588.5 41.1 357 1-417 108-513 (513)
13 3iyg_H T-complex protein 1 sub 100.0 2.6E-72 9E-77 589.0 39.7 359 1-415 107-514 (515)
14 3iyg_A T-complex protein 1 sub 100.0 2.3E-72 8E-77 591.6 38.8 362 1-416 106-529 (529)
15 3p9d_A T-complex protein 1 sub 100.0 8.5E-73 2.9E-77 597.6 33.0 367 1-421 120-554 (559)
16 3iyg_G T-complex protein 1 sub 100.0 2.3E-71 7.8E-76 582.3 39.6 356 1-415 105-514 (515)
17 3p9d_G T-complex protein 1 sub 100.0 3.2E-73 1.1E-77 599.9 25.3 365 1-421 120-533 (550)
18 3iyg_D T-complex protein 1 sub 100.0 3.5E-71 1.2E-75 581.3 38.7 355 1-414 107-517 (518)
19 3p9d_D T-complex protein 1 sub 100.0 1.9E-72 6.6E-77 591.7 29.1 359 1-414 115-527 (528)
20 3iyg_E T-complex protein 1 sub 100.0 1.3E-70 4.4E-75 577.0 40.6 355 1-414 106-514 (515)
21 3p9d_E T-complex protein 1 sub 100.0 4.5E-71 1.6E-75 584.8 32.1 364 1-417 141-560 (562)
22 3p9d_B T-complex protein 1 sub 100.0 8.3E-72 2.8E-76 587.5 25.1 361 1-421 115-524 (527)
23 3iyg_Z T-complex protein 1 sub 100.0 5.4E-70 1.9E-74 571.8 38.7 354 1-414 106-516 (517)
24 3iyg_Q T-complex protein 1 sub 100.0 1.3E-69 4.5E-74 569.0 40.4 354 1-414 107-511 (512)
25 3p9d_H T-complex protein 1 sub 100.0 1.2E-70 4.2E-75 582.1 20.6 364 1-423 122-556 (568)
26 3p9d_F T-complex protein 1 sub 100.0 8.9E-70 3.1E-74 573.9 24.4 357 1-416 113-538 (546)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.9E-45 6.4E-50 328.8 15.0 193 77-269 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 5.2E-44 1.8E-48 320.1 17.0 187 81-267 13-199 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 2.1E-34 7.1E-39 246.2 13.4 144 82-225 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 2.7E-25 9.2E-30 201.6 13.9 145 74-277 2-174 (178)
31 1ass_A Thermosome; chaperonin, 99.9 2.5E-21 8.4E-26 172.2 13.3 127 80-229 1-154 (159)
32 3ruv_A Chaperonin, CPN; double 71.8 0.79 2.7E-05 47.8 0.0 15 50-64 29-44 (543)
33 2q8p_A Iron-regulated surface 37.0 37 0.0013 30.6 5.0 57 127-188 53-109 (260)
34 3md9_A Hemin-binding periplasm 27.4 1.1E+02 0.0039 27.2 6.6 58 127-189 52-111 (255)
35 1n2z_A Vitamin B12 transport p 27.1 58 0.002 29.1 4.4 57 127-188 50-107 (245)
36 2r7a_A Bacterial heme binding 26.2 1.2E+02 0.0041 27.1 6.5 57 127-188 52-111 (256)
37 3v7e_A Ribosome-associated pro 24.8 1.1E+02 0.0038 22.7 4.9 53 126-189 19-72 (82)
38 4hn9_A Iron complex transport 24.3 1E+02 0.0034 29.1 5.8 56 127-188 109-164 (335)
39 1g6h_A High-affinity branched- 23.7 45 0.0015 30.5 3.0 43 105-147 169-216 (257)
40 1sgw_A Putative ABC transporte 23.5 65 0.0022 28.6 4.0 42 105-146 149-195 (214)
41 1ji0_A ABC transporter; ATP bi 22.4 63 0.0021 29.2 3.7 42 105-146 155-201 (240)
42 2r79_A Periplasmic binding pro 21.3 1.5E+02 0.005 27.0 6.1 57 127-188 52-110 (283)
43 1b0u_A Histidine permease; ABC 21.2 62 0.0021 29.7 3.4 42 105-146 169-215 (262)
44 3psh_A Protein HI_1472; substr 20.5 2.1E+02 0.0071 26.5 7.2 59 127-189 77-154 (326)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=8.6e-95 Score=761.24 Aligned_cols=435 Identities=55% Similarity=0.858 Sum_probs=406.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeE
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~ 80 (437)
+||+.|++||++|++.++++|+++++|+++.+.|.++|++|+++++++++++++|+.+++++|.|.+++|++++|+++++
T Consensus 110 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lv 189 (547)
T 1kp8_A 110 MNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVV 189 (547)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEE
Confidence 59999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred eceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccC
Q 013743 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (437)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~ 160 (437)
+|++|+++|.||||++++++|+..++||+||++|++|+++++++++++++.++|+||||++++|+++|+++|+.|+++|.
T Consensus 190 eG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~ 269 (547)
T 1kp8_A 190 EGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGI 269 (547)
T ss_dssp SCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTS
T ss_pred ecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHH
Q 013743 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (437)
Q Consensus 161 ~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~ 240 (437)
++|+|||+|+|++.++++|+|||++|||++++++.+++++++++++||+|++|++++++|+||++|+++++++.|+++|+
T Consensus 270 ~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~ 349 (547)
T 1kp8_A 270 VKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIR 349 (547)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHH
T ss_pred eeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcCccccchHHHHHHHHHHHhhc
Q 013743 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLS 320 (437)
Q Consensus 241 ~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~gvvpGGG~~e~~ls~~L~~~~ 320 (437)
.+++.+.|+|++++|+||+++|+|++|||+|||+|+.+++|+||+++|||+++|+++++|+|||||++|++++..|++++
T Consensus 350 ~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~ 429 (547)
T 1kp8_A 350 QQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLR 429 (547)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCC
T ss_pred HHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhCCCceeEeCCCCccccccccCccccchhHHHHHHHHHH
Q 013743 321 TANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAAS 400 (437)
Q Consensus 321 ~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e 400 (437)
..++.+|+++++|++||+.||++||+|||+|+.+++++|++. +.++|||+.+|++.||++.|||||+.||+++|+.|+|
T Consensus 430 ~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~ 508 (547)
T 1kp8_A 430 GQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAAS 508 (547)
T ss_dssp CSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHH
Confidence 657899999999999999999999999999999999999976 5789999999999999999999999999999999999
Q ss_pred HHHHhhchhhhhhcCCccCCC-CCC--CCCCCCCCCCCC
Q 013743 401 VSSLMTTTEAIVVELPKEEKE-APG--GMGGMGGMGGMD 436 (437)
Q Consensus 401 ~a~~iL~id~iI~~~~~~~~~-~~~--~~~~~~~~~~~~ 436 (437)
+|++|||||++|...|+++++ .|+ ||||||||+|||
T Consensus 509 ~A~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (547)
T 1kp8_A 509 VAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM 547 (547)
T ss_dssp HHHHHHTEEEEEEECCC----------------------
T ss_pred HHHHHHhHhheeecCCccCCCCCCCCCCCCCCCCCCCCC
Confidence 999999999999998876633 232 456777777764
No 2
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=7.4e-96 Score=769.74 Aligned_cols=435 Identities=61% Similarity=0.927 Sum_probs=364.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeE
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~ 80 (437)
+||+.|++||++|++.++++|+++++|+++.+.|.++|++|+++++.+++++++|+.+++++|.|.+++|++++|+++++
T Consensus 111 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv 190 (545)
T 1iok_A 111 MNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVV 190 (545)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEE
Confidence 59999999999999999999999999999888999999999998999999999999999999988888999999999999
Q ss_pred eceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccC
Q 013743 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (437)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~ 160 (437)
+|++|+++|.||||++++++|+..++||+||++|++|+++++++++++++.++|+||||++++|+++|+++|+.|+++|.
T Consensus 191 eG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~ 270 (545)
T 1iok_A 191 EGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGG 270 (545)
T ss_dssp CCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC---------------
T ss_pred ecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHH
Q 013743 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (437)
Q Consensus 161 ~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~ 240 (437)
++|+|||+|+|+++++++|+|||++|||++++++++++++++++++||+|++|++++++|+||++|++++++++|+++|+
T Consensus 271 ~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~ 350 (545)
T 1iok_A 271 LKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIR 350 (545)
T ss_dssp --CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHH
T ss_pred ceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcCccccchHHHHHHHHHHHhhc
Q 013743 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLS 320 (437)
Q Consensus 241 ~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~gvvpGGG~~e~~ls~~L~~~~ 320 (437)
.+++.+.|+|++++|+||+++|+|++|||+|||+|+.+++|+||+++|||+++|+++++|+|||||++|++++.+|++++
T Consensus 351 ~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~ 430 (545)
T 1iok_A 351 QQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLS 430 (545)
T ss_dssp HHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCC
T ss_pred HHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhCCCceeEeCCCCccccccccCccccchhHHHHHHHHHH
Q 013743 321 TANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAAS 400 (437)
Q Consensus 321 ~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e 400 (437)
..++.+|+++++|++||+.||++||+|||+|+.+++++|++.|++++|||+.+|++.||++.|||||+.||+++|+.|+|
T Consensus 431 ~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 510 (545)
T 1iok_A 431 GANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAAS 510 (545)
T ss_dssp CSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHH
Confidence 65789999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred HHHHhhchhhhhhcCCccCCCCCCCCCCCCCCCCCC
Q 013743 401 VSSLMTTTEAIVVELPKEEKEAPGGMGGMGGMGGMD 436 (437)
Q Consensus 401 ~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~ 436 (437)
+|++|||||++|...|++++++ +||||||||+|||
T Consensus 511 ~A~~iL~id~iI~~~~~~~~~~-~~~~~~~~~~~~~ 545 (545)
T 1iok_A 511 VAGLLITTEAMIAEKPEPKAPA-GGMPDMGGMGGMM 545 (545)
T ss_dssp HHHHHHTEEEEEEECC--------------------
T ss_pred HHHHHHhHHHhhccCCccCCCC-CCCCCCCCCCCCC
Confidence 9999999999999988765433 5688999999974
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.2e-93 Score=751.00 Aligned_cols=421 Identities=49% Similarity=0.783 Sum_probs=394.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeE
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~ 80 (437)
+||+.|++||++|.+.++++|+++++|+++.+.|.++|++|++ ++.+++++++|+.+++.+|.|.++.+.+..++++++
T Consensus 110 ihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lv 188 (546)
T 3rtk_A 110 ANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELT 188 (546)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEe
Confidence 5999999999999999999999999999999999999999998 788999999999999999998888777776666999
Q ss_pred eceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccC
Q 013743 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (437)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~ 160 (437)
+|++|+++|.||||++++++|++.++||+||++|++|++++++++++++++++|+|||||+++|+++|+++|+.|+++|+
T Consensus 189 eGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~ 268 (546)
T 3rtk_A 189 EGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGT 268 (546)
T ss_dssp CEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSS
T ss_pred eeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHH
Q 013743 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (437)
Q Consensus 161 ~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~ 240 (437)
++|+|||+|+|++.++++|+|||++|||++++++++++++++++++||+|++|++++++|+||++|++++++..||++|+
T Consensus 269 ~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~ 348 (546)
T 3rtk_A 269 FKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIR 348 (546)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcCccccchHHHHHHHHHHHhhc
Q 013743 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLS 320 (437)
Q Consensus 241 ~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~gvvpGGG~~e~~ls~~L~~~~ 320 (437)
++++++.|+|++++|++|+++|+|++|||+|||+|+.+++|+||+++|||+++|+++++|+|||||++|+++|.+|++++
T Consensus 349 ~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~ 428 (546)
T 3rtk_A 349 QEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK 428 (546)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC
T ss_pred HHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhCCCceeEeCCCCccccccccCccccchhHHHHHHHHHH
Q 013743 321 TANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAAS 400 (437)
Q Consensus 321 ~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e 400 (437)
.++++|+++++|++||+.||++||+|||+|+.+++++|++. ...+|||+.+|++.||++.|||||+.||+++|+.|+|
T Consensus 429 -~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e 506 (546)
T 3rtk_A 429 -LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAAS 506 (546)
T ss_dssp -CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999986 4569999999999999999999999999999999999
Q ss_pred HHHHhhchhhhhhcCCccCCCCCC
Q 013743 401 VSSLMTTTEAIVVELPKEEKEAPG 424 (437)
Q Consensus 401 ~a~~iL~id~iI~~~~~~~~~~~~ 424 (437)
+|++|||||++|...|+++|++|.
T Consensus 507 ~A~~iL~id~iI~~~~~~~~~~~~ 530 (546)
T 3rtk_A 507 IAGLFLTTEAVVADKPEKEKASVP 530 (546)
T ss_dssp HHHHHHHCC---------------
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 999999999999999887766433
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.2e-92 Score=743.66 Aligned_cols=432 Identities=51% Similarity=0.837 Sum_probs=407.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeE
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~ 80 (437)
+||+.|++||++|++.++++|+++++++++.+.|.++|++|++ ++.+++++++|+.+++++|.|.+++|++++|+++++
T Consensus 110 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv 188 (543)
T 1we3_A 110 ANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFV 188 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEE
Confidence 5999999999999999999999999999999999999999998 789999999999999999999999999999999999
Q ss_pred eceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccC
Q 013743 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (437)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~ 160 (437)
+|++|+++|+||||++++++|+..++||+||++|++|+++++++++++++.++|+||||++++|+++|+++|+.|+++|.
T Consensus 189 ~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~ 268 (543)
T 1we3_A 189 EGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGT 268 (543)
T ss_dssp CSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTS
T ss_pred cCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHH
Q 013743 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (437)
Q Consensus 161 ~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~ 240 (437)
++|+|||+|+|+++++++|+|||++|||++++++.+++++++++++||+|++|++++++|+||++|+++++++.|+++|+
T Consensus 269 ~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~ 348 (543)
T 1we3_A 269 LSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIK 348 (543)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHH
T ss_pred eeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcCccccchHHHHHHHHHHHhhc
Q 013743 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLS 320 (437)
Q Consensus 241 ~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~gvvpGGG~~e~~ls~~L~~~~ 320 (437)
.+++.+.++|++++|++|+++|+|++|||+|||+|+.+++|+||+++|||+++|+++++|+|||||++|++++.+|++++
T Consensus 349 ~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~ 428 (543)
T 1we3_A 349 KELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELI 428 (543)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHH
T ss_pred HHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhC-CCceeEeCCCCccccccccCccccchhHHHHHHHH
Q 013743 321 TA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQD-NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDA 398 (437)
Q Consensus 321 ~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~-~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A 398 (437)
.+ ++.+|+++++|++||+.||++||+|||+|+.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|
T Consensus 429 ~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A 508 (543)
T 1we3_A 429 KKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNA 508 (543)
T ss_dssp TTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHH
T ss_pred hccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHH
Confidence 76 78999999999999999999999999999999999999876 46899999999999999999999999999999999
Q ss_pred HHHHHHhhchhhhhhcCCccCCCCCCCCCCCCCCCCCCC
Q 013743 399 ASVSSLMTTTEAIVVELPKEEKEAPGGMGGMGGMGGMDY 437 (437)
Q Consensus 399 ~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (437)
+|+|++|||||++|...|+++|+||.+ +||+||||
T Consensus 509 ~e~a~~iL~id~iI~~~~~~~~~~~~~----~~~~~~~~ 543 (543)
T 1we3_A 509 ASIGALILTTEAVVAEKPEKKESTPAS----AGAGDMDF 543 (543)
T ss_dssp HHHHHHHHTEEEEEEECSCC-------------------
T ss_pred HHHHHHHHHHHHHhhcCCccCCCCCCC----CCCCCCCC
Confidence 999999999999999988776655432 12567766
No 5
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.1e-78 Score=635.84 Aligned_cols=376 Identities=19% Similarity=0.342 Sum_probs=320.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC--C-------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--G------- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~--g------- 63 (437)
+||+.|++||++|++.++++|++++++++ |.+.|.++|+|++++ ++.|++|+++|+.+++++ |
T Consensus 69 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~ 148 (500)
T 3aq1_B 69 VHSTIISEGYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVL 148 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCcccccc
Confidence 59999999999999999999999999987 588999999998664 688999999999999876 4
Q ss_pred ---cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHH----
Q 013743 64 ---VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV---- 123 (437)
Q Consensus 64 ---~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l---- 123 (437)
.|++++|++++|+ ++++|++|+++|.||+| +..++||+|+++|++ |++++++
T Consensus 149 ~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~ 220 (500)
T 3aq1_B 149 ENIKIEKRAGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFL 220 (500)
T ss_dssp HHEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC---------------------
T ss_pred ccEEEEEecCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHH
Confidence 3556699999877 99999999999999985 778999999999998 6677765
Q ss_pred -------HHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcC
Q 013743 124 -------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELG 196 (437)
Q Consensus 124 -------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~ 196 (437)
.+++++|.++|+||||++++|+++|+++|++++ |+||+ ++++++|+|||++|||+++++
T Consensus 221 ~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~--- 286 (500)
T 3aq1_B 221 DQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQD--- 286 (500)
T ss_dssp ----CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSC---
T ss_pred HHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecc---
Confidence 889999999999999999999999999999998 67885 568999999999999999999
Q ss_pred CccccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecC
Q 013743 197 MDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGG 273 (437)
Q Consensus 197 ~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G 273 (437)
++++++++||+|++|++. +++|+||++|+++ ++|||+|||
T Consensus 287 --l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG 329 (500)
T 3aq1_B 287 --LDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNS-----------------------------------KAVTVLLHG 329 (500)
T ss_dssp --TTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTC-----------------------------------CCEEEEEEE
T ss_pred --cccCCHhHCCCceEEEEEEecCeEEEEEECCCCC-----------------------------------ceEEEEecC
Confidence 999999999999999975 7999999998864 589999999
Q ss_pred CchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCC
Q 013743 274 ASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVE 351 (437)
Q Consensus 274 ~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d 351 (437)
+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|
T Consensus 330 ~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d 409 (500)
T 3aq1_B 330 GTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLD 409 (500)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999 9999999999999999999876 78999999999999999999999999999
Q ss_pred HHHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCCCCCCCCCC
Q 013743 352 GAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAPGGMGG 428 (437)
Q Consensus 352 ~~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~ 428 (437)
+.+++++|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+++|+| +|||
T Consensus 410 ~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~--~~g~ 487 (500)
T 3aq1_B 410 PIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQGM--GPGG 487 (500)
T ss_dssp HHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred HHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCC--CCCC
Confidence 999999999876 25899999999999999999999999999999999999999999999999988766554 4899
Q ss_pred CCCCCCCCC
Q 013743 429 MGGMGGMDY 437 (437)
Q Consensus 429 ~~~~~~~~~ 437 (437)
||||++|||
T Consensus 488 ~~~~~~~~~ 496 (500)
T 3aq1_B 488 LPDMPDLDM 496 (500)
T ss_dssp ---------
T ss_pred CCCCCCCCc
Confidence 999999997
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.3e-78 Score=638.65 Aligned_cols=377 Identities=22% Similarity=0.361 Sum_probs=330.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC-Cc-------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE-GV------- 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~-g~------- 64 (437)
+||+.|++||++|.+.++++|++++++++ |.+.|.++|+||+++ ++.|++|+++|+.+++++ |.
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~ 194 (543)
T 3ruv_A 115 VHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEE
Confidence 59999999999999999999999999998 789999999999875 689999999999999987 63
Q ss_pred EEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHH---------
Q 013743 65 ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTA--------- 122 (437)
Q Consensus 65 I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~--------- 122 (437)
|++.+|+++.|+ ++++|++|+++|.||+| ++.++||+|+++|++ |+++++
T Consensus 195 V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~ 266 (543)
T 3ruv_A 195 IEKKSGASIDDT-ELIKGVLVDKERVSAQM-------PKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEE 266 (543)
T ss_dssp EEEEECSCGGGC-EEESSEEESCCCSCTTS-------CSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHH
T ss_pred EEEcCCCCcccc-eeecceEEeccccCccc-------cccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHH
Confidence 456789998887 99999999999999984 778999999999995 456665
Q ss_pred --HHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccc
Q 013743 123 --VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLE 200 (437)
Q Consensus 123 --l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~ 200 (437)
+.+++++|.++|+|||||+++|++.|+++|.+++ |++|+ ++++++|+|||++|||+++++ ++
T Consensus 267 ~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~~v~-----~v~k~~le~ia~~tGa~iis~-----l~ 330 (543)
T 3ruv_A 267 KMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG------IVAAR-----RVKKSDMEKLAKATGANVIAA-----IA 330 (543)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCEESC-----GG
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC------cEEEe-----eCCHHHHHHHHHHhCCceecc-----cc
Confidence 5677899999999999999999999999999877 56776 457999999999999999999 99
Q ss_pred cCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCchh
Q 013743 201 KVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA 277 (437)
Q Consensus 201 ~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~~ 277 (437)
++++++||+|++|++. +++|+||++|++++ .+||+|||+|+.
T Consensus 331 ~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~-----------------------------------~~TI~lrG~te~ 375 (543)
T 3ruv_A 331 ALSAQDLGDAGLVEERKISGDSMIFVEECKHPK-----------------------------------AVTMLIRGTTEH 375 (543)
T ss_dssp GCCGGGCEEEEEEEEEEETTEEEEEEECCSSCS-----------------------------------SEEEEEEESSHH
T ss_pred cCCHHHCCcccEEEEEEeCCceEEEEECCCCCc-----------------------------------eeEEEecCCCHH
Confidence 9999999999999975 78999999998753 689999999999
Q ss_pred HHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHH
Q 013743 278 EVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAVV 355 (437)
Q Consensus 278 ~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v 355 (437)
+++|+||+++|||+++|+++++| +|||||++|+++|.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.++
T Consensus 376 ~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~ 455 (543)
T 3ruv_A 376 VIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEI 455 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 99999999999999999999999 9999999999999999999877 799999999999999999999999999999999
Q ss_pred HHHHHhhCC----CceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCCCCC---CCCCC
Q 013743 356 VGKLLEQDN----TDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAP---GGMGG 428 (437)
Q Consensus 356 ~~~l~~~~~----~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~~~~---~~~~~ 428 (437)
+.+|++.|. .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.|+++ |||||
T Consensus 456 v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~~~~~~~~~~ 535 (543)
T 3ruv_A 456 LVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGAPDMGDMGGMPG 535 (543)
T ss_dssp HHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC----------------
T ss_pred HHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCCCCCCCCCCCCC
Confidence 999998763 67999999999999999999999999999999999999999999999999888755432 24566
Q ss_pred CCCCCCCC
Q 013743 429 MGGMGGMD 436 (437)
Q Consensus 429 ~~~~~~~~ 436 (437)
||||+|||
T Consensus 536 ~~~~~~~~ 543 (543)
T 3ruv_A 536 MGGMPGMM 543 (543)
T ss_dssp --------
T ss_pred CCCCCCCC
Confidence 77777665
No 7
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=7.1e-76 Score=619.92 Aligned_cols=375 Identities=22% Similarity=0.370 Sum_probs=328.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC-CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC--C-------c
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS-TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--G-------V 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~-~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~--g-------~ 64 (437)
+||+.|++||++|++.++++|+++++| + +.+.|.++|+|++++ ++.|++|+++|+.+++++ | .
T Consensus 118 ihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~ 196 (545)
T 1a6d_A 118 VHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTAN 196 (545)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccce
Confidence 599999999999999999999999999 7 888999999999764 588999999999999875 2 4
Q ss_pred EE--EEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHH------
Q 013743 65 IT--IHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV------ 123 (437)
Q Consensus 65 I~--~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l------ 123 (437)
|. +++|++++|+ ++++|++|+++|.||+| +..++||+|+++|++ |++++++
T Consensus 197 I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~ 268 (545)
T 1a6d_A 197 IKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQ 268 (545)
T ss_dssp EEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHH
T ss_pred EEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHH
Confidence 44 4599999998 99999999999999985 667899999999998 6677775
Q ss_pred -----HHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCc
Q 013743 124 -----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMD 198 (437)
Q Consensus 124 -----~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~ 198 (437)
.+++++|.++|+||||++++|+++|+++|++|+ |+||+ ++++++|+|||++|||+++++
T Consensus 269 E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~----- 332 (545)
T 1a6d_A 269 ETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD----- 332 (545)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEESS-----
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeecc-----
Confidence 788999999999999999999999999999998 67885 567999999999999999999
Q ss_pred cccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCc
Q 013743 199 LEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGAS 275 (437)
Q Consensus 199 ~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t 275 (437)
++++++++||+|++|++. +++|+||++|+++ ++|||+|||+|
T Consensus 333 l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t 377 (545)
T 1a6d_A 333 LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP-----------------------------------KAVSILIRGGT 377 (545)
T ss_dssp GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS-----------------------------------SCEEEEECCSS
T ss_pred cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----------------------------------ceEEEEEcCCC
Confidence 999999999999999975 6899999998864 48999999999
Q ss_pred hhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHH
Q 013743 276 EAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGA 353 (437)
Q Consensus 276 ~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~ 353 (437)
+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++.+|+++++|++||+.||++||+|||+|+.
T Consensus 378 e~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~ 457 (545)
T 1a6d_A 378 DHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPI 457 (545)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 9999999999999999999999999 9999999999999999999876 7899999999999999999999999999999
Q ss_pred HHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCCCCCCC-CCCC
Q 013743 354 VVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEAPGG-MGGM 429 (437)
Q Consensus 354 ~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~~~~~~-~~~~ 429 (437)
+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+++++|++| +|||
T Consensus 458 ~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~ 537 (545)
T 1a6d_A 458 NTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKSTPPSGQGGQGQGM 537 (545)
T ss_dssp HHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------------------
T ss_pred HHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCC
Confidence 9999999876 35899999999999999999999999999999999999999999999999988763332123 3678
Q ss_pred CCCCCCC
Q 013743 430 GGMGGMD 436 (437)
Q Consensus 430 ~~~~~~~ 436 (437)
+| ||||
T Consensus 538 ~~-~~~~ 543 (545)
T 1a6d_A 538 PG-GGMP 543 (545)
T ss_dssp -------
T ss_pred CC-CCCC
Confidence 77 6654
No 8
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.7e-76 Score=626.74 Aligned_cols=389 Identities=19% Similarity=0.291 Sum_probs=327.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccCC---------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGKEG--------- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~g--------- 63 (437)
+||+.|++||++|.+.++++|+++++|++ +.+.|.++|+|++++ ++.|++|+++|+.++++++
T Consensus 116 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~ 195 (590)
T 3p9d_C 116 IHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPN 195 (590)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC---------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccc
Confidence 59999999999999999999999999987 468999999999765 5889999999999998753
Q ss_pred ---------cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHH
Q 013743 64 ---------VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLT 121 (437)
Q Consensus 64 ---------~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~ 121 (437)
.|.+++|+++.|+ ++++|++|++++.||. |++.++||+|+++|++| ++++
T Consensus 196 ~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~~-------m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~ 267 (590)
T 3p9d_C 196 FEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHPK-------MSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEE 267 (590)
T ss_dssp --CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCTT-------SCSCEESCCEECCCCCCSCCCCTTTEECCBCSTT
T ss_pred cccchhhceEEEEecCCCcccc-eeeeEEEEecccCCCC-------CcceeeeeEEEEEcccccccccccCceEEeCCHH
Confidence 2677889999987 9999999999988763 78899999999999953 4566
Q ss_pred HHHHH-----------HHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeE
Q 013743 122 AVVRV-----------LELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDL 190 (437)
Q Consensus 122 ~l~~~-----------le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~i 190 (437)
++.++ +++|.+.|++|||++++|++.|+++|+++++ +| +++.++++|+|||++|||++
T Consensus 268 ~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I------~a-----v~~~~k~~le~ia~~TGa~i 336 (590)
T 3p9d_C 268 DWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC------SV-----LRRVKKSDNNRIARVTGATI 336 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC------CC-----CCCCCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc------ee-----eccCCHHHHHHHHHHhCCce
Confidence 65554 4689999999999999999999999999874 44 56778999999999999999
Q ss_pred eccCcCCccccCCcCCCcc-eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHH
Q 013743 191 ITEELGMDLEKVNLDMLGT-CKKVT---ISKDDTVILDGAGDKKS--------------------------IEERCEQIR 240 (437)
Q Consensus 191 i~~~~~~~~~~~~~~~lG~-~~~v~---i~~~~~~~~~~~~~~~~--------------------------i~~~~~~l~ 240 (437)
+++ ++++++++||+ |++|+ +++++|+||++|+++++ ++.|+++|+
T Consensus 337 is~-----l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~ 411 (590)
T 3p9d_C 337 VNR-----VEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKIS 411 (590)
T ss_dssp CSC-----STTCCTTSCBCCCSEEECCEETTEECEEECC-----------------------------------------
T ss_pred eec-----ccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHH
Confidence 999 99999999999 99998 46899999999999888 999999999
Q ss_pred HHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhh
Q 013743 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKL 319 (437)
Q Consensus 241 ~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~ 319 (437)
.+++.+.|+|+++ +++|+|++|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|+++|.+|+++
T Consensus 412 ~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~ 486 (590)
T 3p9d_C 412 SSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEK 486 (590)
T ss_dssp ---------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHH
T ss_pred HHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHH
Confidence 9999999999865 578999999999999999999999999999999999999996 9999999999999999998
Q ss_pred ccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHH
Q 013743 320 STA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTAL 395 (437)
Q Consensus 320 ~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL 395 (437)
+.+ ++.+|+++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.||+++|
T Consensus 487 ~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 566 (590)
T 3p9d_C 487 AKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSV 566 (590)
T ss_dssp HHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHH
T ss_pred hhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHH
Confidence 766 78999999999999999999999999999999999999876 56799999999999999999999999999999
Q ss_pred HHHHHHHHHhhchhhhhhcCCcc
Q 013743 396 VDAASVSSLMTTTEAIVVELPKE 418 (437)
Q Consensus 396 ~~A~e~a~~iL~id~iI~~~~~~ 418 (437)
+.|+|+|++|||||++|...|+.
T Consensus 567 ~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 567 KTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp HHHHHHHHHTTSEEEEECCCC--
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999887654
No 9
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.2e-75 Score=616.55 Aligned_cols=361 Identities=20% Similarity=0.380 Sum_probs=332.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC--C-------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--G------- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~--g------- 63 (437)
+||+.|++||++|++.++++|++++++++ |.+.|.++|+|++++ ++.|++|+++|+.+++++ |
T Consensus 119 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~ 198 (548)
T 1q3q_A 119 IHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLD 198 (548)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCC
Confidence 59999999999999999999999999987 488999999999765 478999999999999875 4
Q ss_pred cE--EEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHH-----
Q 013743 64 VI--TIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV----- 123 (437)
Q Consensus 64 ~I--~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l----- 123 (437)
.| ++++|++++|+ ++++|++|+++|.||+| +..++||+|+++|++ |++++++
T Consensus 199 ~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 270 (548)
T 1q3q_A 199 NIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLE 270 (548)
T ss_dssp GEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHH
T ss_pred eEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHH
Confidence 44 45699999988 99999999999999985 567999999999998 7778775
Q ss_pred ------HHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCC
Q 013743 124 ------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 197 (437)
Q Consensus 124 ------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~ 197 (437)
.+++++|.++|+||||++++|+++|+++|++|+ |+||+ ++++++|+|||++|||+++++
T Consensus 271 ~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~~---- 335 (548)
T 1q3q_A 271 QEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTN---- 335 (548)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSS----
T ss_pred HHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEecc----
Confidence 788999999999999999999999999999998 67885 568999999999999999999
Q ss_pred ccccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCC
Q 013743 198 DLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGA 274 (437)
Q Consensus 198 ~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~ 274 (437)
++++++++||+|++|++. +++|+||++|+++ ++|||+|||+
T Consensus 336 -l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~ 379 (548)
T 1q3q_A 336 -VKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP-----------------------------------KAVTILIRGG 379 (548)
T ss_dssp -GGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC-----------------------------------SSEEEEEEES
T ss_pred -cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----------------------------------CeEEEEECCC
Confidence 999999999999999975 7899999999864 4899999999
Q ss_pred chhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCH
Q 013743 275 SEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEG 352 (437)
Q Consensus 275 t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~ 352 (437)
|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+
T Consensus 380 te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~ 459 (548)
T 1q3q_A 380 TEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDT 459 (548)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999 9999999999999999999876 789999999999999999999999999999
Q ss_pred HHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCC
Q 013743 353 AVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEK 420 (437)
Q Consensus 353 ~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~ 420 (437)
.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++++
T Consensus 460 ~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 460 VEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp HHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred HHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 99999999876 358999999999999999999999999999999999999999999999999877644
No 10
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4.1e-74 Score=606.52 Aligned_cols=363 Identities=23% Similarity=0.361 Sum_probs=329.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC--Cc------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--GV------ 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~--g~------ 64 (437)
+||+.|++||++|.+.++++|++++++++ +.+.|.++|+||+++ ++.|++|+++|+.+++++ |.
T Consensus 126 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~ 205 (553)
T 3ko1_A 126 VHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLD 205 (553)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGG
T ss_pred CCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEech
Confidence 59999999999999999999999999998 788999999999986 689999999999999885 54
Q ss_pred ---EEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHH------
Q 013743 65 ---ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTA------ 122 (437)
Q Consensus 65 ---I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~------ 122 (437)
|++.+|+++.|+ ++++|++|+++|.||+| ++.++||+|+++|++ |+++++
T Consensus 206 ~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~ 277 (553)
T 3ko1_A 206 NIQIVKKAGGSINDT-QLVYGIVVDKEVVHPGM-------PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLD 277 (553)
T ss_dssp GEEEEECCCSCGGGC-EEESEEEECSCBSCTTS-------CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHH
T ss_pred hHHHHHHhCCccccc-eeeEEEEecccccCCCC-------ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHH
Confidence 445689898887 99999999999999984 778999999999994 567776
Q ss_pred -----HHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCC
Q 013743 123 -----VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 197 (437)
Q Consensus 123 -----l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~ 197 (437)
+.+++++|.++|+||||++++|++.++++|.+++ |++|+ ++++++|+|||++|||+++++
T Consensus 278 ~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g------I~~v~-----~v~k~~leria~~tGa~ivs~---- 342 (553)
T 3ko1_A 278 EEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG------VLAVR-----RAKKSDLEKLARATGGRVVSN---- 342 (553)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT------CEEEC-----CCCHHHHHHHHTTTTCCEESC----
T ss_pred HHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc------hhhhh-----hhhhhhHHHHHHhhCCeeecc----
Confidence 4567899999999999999999999999999877 56775 457999999999999999999
Q ss_pred ccccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCC
Q 013743 198 DLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGA 274 (437)
Q Consensus 198 ~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~ 274 (437)
++++++++||+|++|++. +++|+||++|++++ .+||+|||+
T Consensus 343 -l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~-----------------------------------~~TI~lrG~ 386 (553)
T 3ko1_A 343 -IDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPK-----------------------------------SISILIRGG 386 (553)
T ss_dssp -GGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSS-----------------------------------CEEEEECCS
T ss_pred -cccCChhhcchHHHHHHhhcCcceEEEeccCCCCc-----------------------------------eEEEeeecc
Confidence 999999999999999975 88999999998753 799999999
Q ss_pred chhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCH
Q 013743 275 SEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEG 352 (437)
Q Consensus 275 t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~ 352 (437)
|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+
T Consensus 387 te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~ 466 (553)
T 3ko1_A 387 LERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDP 466 (553)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCH
Confidence 99999999999999999999999999 9999999999999999999876 799999999999999999999999999999
Q ss_pred HHHHHHHHhhC---C-CceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCCCC
Q 013743 353 AVVVGKLLEQD---N-TDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 422 (437)
Q Consensus 353 ~~v~~~l~~~~---~-~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~~~ 422 (437)
.+++.+|++.| + .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.|++
T Consensus 467 ~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~ 540 (553)
T 3ko1_A 467 IDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGES 540 (553)
T ss_dssp HHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC--------
T ss_pred HHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccCCC
Confidence 99999999887 2 5799999999999999999999999999999999999999999999999988776653
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=6.6e-73 Score=597.45 Aligned_cols=363 Identities=20% Similarity=0.345 Sum_probs=329.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC--Cc------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--GV------ 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~--g~------ 64 (437)
+||+.|++||++|++.++++|++++++++ |.+.|.++|+|++++ ++.|++|+++|+.+++++ |.
T Consensus 117 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~ 196 (543)
T 1a6d_B 117 VHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFD 196 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccc
Confidence 59999999999999999999999999997 378999999999765 478999999999999876 52
Q ss_pred -E--EEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHH-----
Q 013743 65 -I--TIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV----- 123 (437)
Q Consensus 65 -I--~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l----- 123 (437)
| .+++|++++|+ ++++|++|+++|.||+| +..++||+|+++|++ |++++++
T Consensus 197 ~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 268 (543)
T 1a6d_B 197 NIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLA 268 (543)
T ss_dssp GEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHH
T ss_pred eEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHH
Confidence 4 45699999988 99999999999999985 667899999999998 7777775
Q ss_pred ------HHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCC
Q 013743 124 ------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 197 (437)
Q Consensus 124 ------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~ 197 (437)
.+++++|.++|+||||++++|+++|+++|++++ |+||+ ++++++|+|||++|||+++++
T Consensus 269 ~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~v~k~~le~ia~~tGa~iis~---- 333 (543)
T 1a6d_B 269 QEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVST---- 333 (543)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEESC----
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCceecc----
Confidence 788999999999999999999999999999998 67885 567999999999999999999
Q ss_pred ccccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCC
Q 013743 198 DLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGA 274 (437)
Q Consensus 198 ~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~ 274 (437)
++++++++||+|++|++. +++|+||++|+++ ++|||+|||+
T Consensus 334 -l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~ 377 (543)
T 1a6d_B 334 -IDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP-----------------------------------KAVSILVRGE 377 (543)
T ss_dssp -GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS-----------------------------------SCEEEEEEES
T ss_pred -cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----------------------------------ceEEEEecCC
Confidence 999999999999999975 7899999998864 4899999999
Q ss_pred chhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCH
Q 013743 275 SEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEG 352 (437)
Q Consensus 275 t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~ 352 (437)
|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++.+|+++++|++||+.||++||+|||+|+
T Consensus 378 t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~ 457 (543)
T 1a6d_B 378 TEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDP 457 (543)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 99999999999999999999999999 9999999999999999999876 789999999999999999999999999999
Q ss_pred HHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCCCC
Q 013743 353 AVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKEA 422 (437)
Q Consensus 353 ~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~~~ 422 (437)
.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.|+|
T Consensus 458 ~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~ 530 (543)
T 1a6d_B 458 IDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSSN 530 (543)
T ss_dssp HHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC---------
T ss_pred HHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCC
Confidence 99999999876 35899999999999999999999999999999999999999999999999988765554
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.2e-72 Score=588.55 Aligned_cols=357 Identities=21% Similarity=0.304 Sum_probs=329.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC-----CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC---Cc--
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS-----TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE---GV-- 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~-----~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~---g~-- 64 (437)
+||+.|++||++|.+.++++|+++++|++ +.+.|.++|+|++++ ++.|++|+++|+.+++++ +.
T Consensus 108 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~ 187 (513)
T 3iyg_B 108 IHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIH 187 (513)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEE
Confidence 59999999999999999999999999997 567999999998864 478999999999999987 65
Q ss_pred EEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc--------------CCCHHHHH------
Q 013743 65 ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK--------------ISNLTAVV------ 124 (437)
Q Consensus 65 I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~--------------i~~~~~l~------ 124 (437)
|.+++|+++.|+ ++++|++|+++|.|| |+..++||+|+++|++ |++++++.
T Consensus 188 V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E 258 (513)
T 3iyg_B 188 VIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAE 258 (513)
T ss_pred EEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHH
Confidence 455679999998 999999999999887 6788999999999993 56677764
Q ss_pred -----HHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCcc
Q 013743 125 -----RVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (437)
Q Consensus 125 -----~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~ 199 (437)
+++++|.++|+||||++++|++.|+++|.+++ |+||++|+ +.+|+|||++|||+++++ +
T Consensus 259 ~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~------I~av~~~~-----~~~le~ia~~tGa~ii~~-----l 322 (513)
T 3iyg_B 259 KEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAG------VMAIEHAD-----FVGVERLALVTGGEIAST-----F 322 (513)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcC------ceEEecCC-----HHHHHHHHHHhCCEEecc-----c
Confidence 47889999999999999999999999999887 78999885 579999999999999999 9
Q ss_pred ccCCcCCCcceeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCch
Q 013743 200 EKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASE 276 (437)
Q Consensus 200 ~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~ 276 (437)
+++++++||+|++|+ +++++++||++|+++ ++|||+|||+|+
T Consensus 323 ~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~tI~lrG~t~ 367 (513)
T 3iyg_B 323 DHPELVKLGSCKLIEEVMIGEDKLIHFSGVALG-----------------------------------EACTIVLRGATQ 367 (513)
T ss_pred ccCCHhHCCcccEEEEEEECCeEEEEEecCCCC-----------------------------------ceEEEEecCCCH
Confidence 999999999999999 578999999998753 489999999999
Q ss_pred hHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHH
Q 013743 277 AEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAV 354 (437)
Q Consensus 277 ~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 354 (437)
.+++|+||+++|||+++|++++++ +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+
T Consensus 368 ~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~ 447 (513)
T 3iyg_B 368 QILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSAD 447 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999996 9999999999999999999876 79999999999999999999999999999999
Q ss_pred HHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCc
Q 013743 355 VVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 417 (437)
Q Consensus 355 v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~ 417 (437)
++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+
T Consensus 448 ~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 448 LVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999876 467999999999999999999999999999999999999999999999988653
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-72 Score=589.05 Aligned_cols=359 Identities=16% Similarity=0.251 Sum_probs=328.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--C----HHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC---Cc-
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--T----SEEIAQVGTISANG------EREIGELIAKAMEKVGKE---GV- 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~----~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~---g~- 64 (437)
+||+.|++||++|.+.++++|+++++|++ + ++.|.++|+|++++ ++.|++|+++|+.+++.+ +.
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I 186 (515)
T 3iyg_H 107 LHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMI 186 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceE
Confidence 59999999999999999999999999985 5 56789999999853 578999999999999875 54
Q ss_pred -EEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHH-------
Q 013743 65 -ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV------- 123 (437)
Q Consensus 65 -I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l------- 123 (437)
|.+.+|+++.|+ ++++|++|+++|.||||++ +|..++||+|+++|++ |++++++
T Consensus 187 ~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E 261 (515)
T 3iyg_H 187 GIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAE 261 (515)
T ss_pred EEEecCCCCccce-EEEeeeEEecCccCccccc----CCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHH
Confidence 556779898887 9999999999999999864 5668999999999995 6677775
Q ss_pred ----HHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCcc
Q 013743 124 ----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (437)
Q Consensus 124 ----~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~ 199 (437)
.+++++|.+.|+||||++++|++.++++|.++++ +++ +++++++|+|||++|||+++++ +
T Consensus 262 ~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI------~~v-----~~~~k~~leria~~tGa~ii~~-----l 325 (515)
T 3iyg_H 262 WNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDM------FCA-----GRVPEEDLKRTMMACGGSIQTS-----V 325 (515)
T ss_pred HHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCC------ccc-----ccccHHHHHHHHHHhCCEEeec-----c
Confidence 5678999999999999999999999999987763 454 4668999999999999999999 9
Q ss_pred ccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCch
Q 013743 200 EKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASE 276 (437)
Q Consensus 200 ~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~ 276 (437)
+++++++||+|++|++. +++|+||++|+++ ..|||+|||+|+
T Consensus 326 ~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-----------------------------------~~~tI~lrG~t~ 370 (515)
T 3iyg_H 326 NALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-----------------------------------KTCTIILRGGAE 370 (515)
T ss_pred ccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC-----------------------------------ceEEEEEeCCcH
Confidence 99999999999999975 6899999999875 379999999999
Q ss_pred hHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHH
Q 013743 277 AEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAV 354 (437)
Q Consensus 277 ~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 354 (437)
.+++|+||+++|||+++|++++++ +|||||++|+++|.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+
T Consensus 371 ~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 450 (515)
T 3iyg_H 371 QFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATN 450 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999996 9999999999999999999877 79999999999999999999999999999999
Q ss_pred HHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcC
Q 013743 355 VVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVEL 415 (437)
Q Consensus 355 v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~ 415 (437)
++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||+.+
T Consensus 451 ~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 451 ILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999887 3569999999999999999999999999999999999999999999999753
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-72 Score=591.59 Aligned_cols=362 Identities=17% Similarity=0.249 Sum_probs=327.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHh-ccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhc---cCC-----
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKS-RARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVG---KEG----- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~-~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~---~~g----- 63 (437)
+||+.|++||++|.+.++++|++ ++++++ +.+.|.++|+||+++ ++.|++|+++|+.+++ ++|
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~d 185 (529)
T 3iyg_A 106 IHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYP 185 (529)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccc
Confidence 59999999999999999999999 999997 788999999999864 5899999999999997 333
Q ss_pred ----cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHHH----
Q 013743 64 ----VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTA---- 122 (437)
Q Consensus 64 ----~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~~---- 122 (437)
.|.+.+|+++.|+ ++++|++|+++|.||+| +..++||||+++++++ +++++
T Consensus 186 v~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i 257 (529)
T 3iyg_A 186 VNSINVLKAHGRSQMES-MLINGYALNCVVGSQGM-------PKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQI 257 (529)
T ss_pred cceEEEEEecCCCccce-EEEeeeEEecCcccccC-------CcccCCceEEEecCCcccccccCCceEEeCCHHHHHHH
Confidence 2567899999987 99999999999999985 6678999999999975 34433
Q ss_pred -------HHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCc
Q 013743 123 -------VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEEL 195 (437)
Q Consensus 123 -------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~ 195 (437)
+.+++++|.++|+||||++++|++.|+++|++|+ |+||+ ++++++|+|||++|||+++++..
T Consensus 258 ~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~-----~v~k~~leria~~tGa~iv~~~~ 326 (529)
T 3iyg_A 258 RQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR-----RVLKRDLKRIAKASGATVLSTLA 326 (529)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-----cCCHHHHHHHHHHhCCeeecchh
Confidence 4678899999999999999999999999999998 57886 45799999999999999999943
Q ss_pred CCc-cccCCcCCCcceeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEe
Q 013743 196 GMD-LEKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKI 271 (437)
Q Consensus 196 ~~~-~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v 271 (437)
+++ .+++++++||+|+.|+ +++++|+||++|+++ ++|||+|
T Consensus 327 ~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~l 371 (529)
T 3iyg_A 327 NLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-----------------------------------TSASVIL 371 (529)
T ss_pred cccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC-----------------------------------ceEEEEE
Confidence 333 2345678999999999 678999999999875 3799999
Q ss_pred cCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcC
Q 013743 272 GGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAG 349 (437)
Q Consensus 272 ~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG 349 (437)
||+|+.+++|.||+++|||+++|+++++| +|||||++|+++|.+|++++.+ ++++|+++++|++||+.||++||+|||
T Consensus 372 rG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG 451 (529)
T 3iyg_A 372 RGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAA 451 (529)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999 9999999999999999999877 799999999999999999999999999
Q ss_pred CCHHHHHHHHHhhC---C--------CceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCC
Q 013743 350 VEGAVVVGKLLEQD---N--------TDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 416 (437)
Q Consensus 350 ~d~~~v~~~l~~~~---~--------~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~ 416 (437)
+|+.+++.+|++.| + .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||...|
T Consensus 452 ~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 452 QDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred CCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 99999999999877 2 5799999999999999999999999999999999999999999999998743
No 15
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=8.5e-73 Score=597.64 Aligned_cols=367 Identities=18% Similarity=0.330 Sum_probs=334.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHh-ccccCCC--HHHHHHHHHHhcCC------chhHHHHHHHHHHHhcc-----CC---
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKS-RARMIST--SEEIAQVGTISANG------EREIGELIAKAMEKVGK-----EG--- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~-~s~~v~~--~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~-----~g--- 63 (437)
+||+.|++||++|++.++++|++ +++|++. .+.|.++|+||+++ ++.|++|+++|+.++++ +|
T Consensus 120 ihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~ 199 (559)
T 3p9d_A 120 IHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYP 199 (559)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccc
Confidence 69999999999999999999999 9999983 67899999999987 68999999999999983 23
Q ss_pred ----cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeec--CceEEEecccC-------------CCHHH--
Q 013743 64 ----VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELE--DPLILVHEKKI-------------SNLTA-- 122 (437)
Q Consensus 64 ----~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~--~p~Ill~d~~i-------------~~~~~-- 122 (437)
.|.+++|++++|+ ++++|++|+++|.||+| +..++ ||+|++++++| +++++
T Consensus 200 l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m-------~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~ 271 (559)
T 3p9d_A 200 VKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM-------PKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLE 271 (559)
T ss_dssp TTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS-------CSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHH
T ss_pred hhHeEEEEecCCCccce-eEeccEEEeecccCCCc-------ceeeccCCceEEEEeccccccccccCceEEeCCHHHHH
Confidence 3677889999987 99999999999999985 66788 99999999986 34444
Q ss_pred ---------HHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEecc
Q 013743 123 ---------VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 193 (437)
Q Consensus 123 ---------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~ 193 (437)
+.+++++|.++|+||||++++|+++|+++|++|+ |+||+ ++++++|+|||++|||+++++
T Consensus 272 ~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~TGa~iis~ 340 (559)
T 3p9d_A 272 QIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------IMGVR-----RCKKEDLRRIARATGATLVSS 340 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------CEEES-----SCCHHHHHHHHHHSSCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------CceEc-----cCCHHHHHHHHHHhCCEEEec
Confidence 5788999999999999999999999999999998 57775 567999999999999999999
Q ss_pred CcCCcc-ccCCcCCCcceeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEE
Q 013743 194 ELGMDL-EKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVL 269 (437)
Q Consensus 194 ~~~~~~-~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI 269 (437)
..++.+ +++++++||+|++|+ +++++|+||++|+++ ++|||
T Consensus 341 ~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~tI 385 (559)
T 3p9d_A 341 MSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKH-----------------------------------SSSSI 385 (559)
T ss_dssp SCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSS-----------------------------------CCCCE
T ss_pred cccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCC-----------------------------------CEEEE
Confidence 655554 789999999999999 578999999998863 58999
Q ss_pred EecCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHH
Q 013743 270 KIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAAN 347 (437)
Q Consensus 270 ~v~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~N 347 (437)
+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|
T Consensus 386 ~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~N 465 (559)
T 3p9d_A 386 ILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVN 465 (559)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999999999877 7999999999999999999999999
Q ss_pred cCCCHHHHHHHHHhhC---CC------------ceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhh
Q 013743 348 AGVEGAVVVGKLLEQD---NT------------DLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIV 412 (437)
Q Consensus 348 aG~d~~~v~~~l~~~~---~~------------~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI 412 (437)
||+|+.+++.+|++.| +. ++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|
T Consensus 466 aG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii 545 (559)
T 3p9d_A 466 AAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMI 545 (559)
T ss_dssp SSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred CCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 9999999999999876 23 79999999999999999999999999999999999999999999999
Q ss_pred hcCCccCCC
Q 013743 413 VELPKEEKE 421 (437)
Q Consensus 413 ~~~~~~~~~ 421 (437)
...|++++.
T Consensus 546 ~~~~~~~~~ 554 (559)
T 3p9d_A 546 TVDPEPPKE 554 (559)
T ss_dssp ECCCCCCCC
T ss_pred hcCCccccc
Confidence 987665533
No 16
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-71 Score=582.32 Aligned_cols=356 Identities=19% Similarity=0.286 Sum_probs=326.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCCc------hhHHHHHHHHHHHhccC--C-------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANGE------REIGELIAKAMEKVGKE--G------- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~~------~~ls~lv~~A~~~v~~~--g------- 63 (437)
+||+.|++||++|.+.++++|+++++|++ |.+.|.++|+||++++ +.+++++++|+..+.++ +
T Consensus 105 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~ 184 (515)
T 3iyg_G 105 MHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIK 184 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchh
Confidence 59999999999999999999999999987 4789999999999863 56789999999988732 2
Q ss_pred ---cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecc-------------cCCCHHHHHHHH
Q 013743 64 ---VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK-------------KISNLTAVVRVL 127 (437)
Q Consensus 64 ---~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~-------------~i~~~~~l~~~l 127 (437)
.|++++|++++|+ ++++|++|+++|.||. |++.++||+|+++++ .|++++++.+++
T Consensus 185 ~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l 256 (515)
T 3iyg_G 185 KYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRIL 256 (515)
T ss_pred heeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHH
Confidence 3677899999988 9999999999999985 688999999999999 467788887776
Q ss_pred H-----------HHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcC
Q 013743 128 E-----------LALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELG 196 (437)
Q Consensus 128 e-----------~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~ 196 (437)
+ +|.+.|++|||++++|++.++++|.+++ |+|| +++++++|+|||++|||+++++
T Consensus 257 ~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~------I~av-----~~~~k~~leria~~tGa~ii~~--- 322 (515)
T 3iyg_G 257 QMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN------ITAI-----RRVRKTDNNRIARACGARIVSR--- 322 (515)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC------ceee-----ccCCHHHHHHHHHHhCCeeecc---
Confidence 6 8999999999999999999999999877 5676 4668999999999999999999
Q ss_pred CccccCCcCCCcc-eeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEec
Q 013743 197 MDLEKVNLDMLGT-CKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIG 272 (437)
Q Consensus 197 ~~~~~~~~~~lG~-~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~ 272 (437)
++++++++||+ |+.|++. +++|+||++|+++ ..|||+||
T Consensus 323 --l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~-----------------------------------~~~TIllr 365 (515)
T 3iyg_G 323 --PEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP-----------------------------------KACTILLR 365 (515)
T ss_pred --ccccChhhcCCcccEEEEEEECCceEEEEeCCCCC-----------------------------------CeEEEEEc
Confidence 99999999999 9999964 5689999999875 37999999
Q ss_pred CCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCC
Q 013743 273 GASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGV 350 (437)
Q Consensus 273 G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~ 350 (437)
|+|+.+++|.||+++|||+++|++++++ +|||||++|+++|.+|++++.+ ++++|+++++|++||+.||++||+|||+
T Consensus 366 G~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~ 445 (515)
T 3iyg_G 366 GASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGA 445 (515)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999887 9999999999999999999877 8999999999999999999999999999
Q ss_pred CHHHHHHHHHhhC----CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcC
Q 013743 351 EGAVVVGKLLEQD----NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVEL 415 (437)
Q Consensus 351 d~~~v~~~l~~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~ 415 (437)
|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||...
T Consensus 446 d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 446 STIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred CHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 9999999999876 3579999999999999999999999999999999999999999999999754
No 17
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3.2e-73 Score=599.88 Aligned_cols=365 Identities=16% Similarity=0.221 Sum_probs=329.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--C---HHHHHHHHHHhcCC------chhHHHHHHHHHHHhccCC------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--T---SEEIAQVGTISANG------EREIGELIAKAMEKVGKEG------ 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~---~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~g------ 63 (437)
+||+.|++||++|.+.++++|++++++++ + .+.|.++|+||+++ ++.|++|+++|+.+++++.
T Consensus 120 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I 199 (550)
T 3p9d_G 120 ISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLI 199 (550)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchhe
Confidence 59999999999999999999999999986 3 66899999999754 6889999999999998532
Q ss_pred cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHHH------
Q 013743 64 VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAVV------ 124 (437)
Q Consensus 64 ~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l~------ 124 (437)
.|.+++|++++|+ ++++|++|+++|.||||.+ |+..++||+||++|++ |++++++.
T Consensus 200 ~Vikv~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E 274 (550)
T 3p9d_G 200 GIKKIPGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAE 274 (550)
T ss_dssp CCCBCCSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHH
T ss_pred eEEEecCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHH
Confidence 3556679999998 9999999999999999864 7777999999999998 45665554
Q ss_pred -----HHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCcc
Q 013743 125 -----RVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (437)
Q Consensus 125 -----~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~ 199 (437)
+++++|.++|++|||++++|++.++++|.+++ |++++ ++++++|+|||++|||+++++ +
T Consensus 275 ~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g------I~~v~-----~v~k~~lerIa~~tGa~iis~-----l 338 (550)
T 3p9d_G 275 WQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN------IFCAG-----RVSADDMNRVIQAVGGSIQST-----T 338 (550)
T ss_dssp HHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT------CEEEE-----CCCTTHHHHHHHHTCCCCBSS-----G
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC------Ccccc-----CcCHHHHHHHHHHhCCceecc-----h
Confidence 46788999999999999999999999998776 45664 557899999999999999999 9
Q ss_pred ccCCcCCCcceeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCch
Q 013743 200 EKVNLDMLGTCKKVTI---SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASE 276 (437)
Q Consensus 200 ~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~ 276 (437)
++++++++|+|+.|++ ++++++||++|+++ ++|||+|||+|+
T Consensus 339 ~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~-----------------------------------~~~tI~lrG~te 383 (550)
T 3p9d_G 339 SDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA-----------------------------------KTCTLLLRGGAE 383 (550)
T ss_dssp GGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------------------------------CCCCCCBCSSSH
T ss_pred hhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------------------------------ceeEEEEeCCcH
Confidence 9999999999999997 57899999999864 479999999999
Q ss_pred hHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHH
Q 013743 277 AEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAV 354 (437)
Q Consensus 277 ~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 354 (437)
.+++|+||+++|||+++|+++++| +|||||++|+++|.+|++++.+ ++++|+++++|++||+.||++||+|||+|+.+
T Consensus 384 ~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 463 (550)
T 3p9d_G 384 QVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIE 463 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999999 9999999999999999999876 79999999999999999999999999999999
Q ss_pred HHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCCC
Q 013743 355 VVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKE 421 (437)
Q Consensus 355 v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~~ 421 (437)
++++|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+++++
T Consensus 464 vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~ 533 (550)
T 3p9d_G 464 ILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESAN 533 (550)
T ss_dssp HHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC---
T ss_pred HHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCccccc
Confidence 999999876 5689999999999999999999999999999999999999999999999988876544
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.5e-71 Score=581.29 Aligned_cols=355 Identities=18% Similarity=0.260 Sum_probs=325.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCCc------hhHHHHHHHHHHHhcc---CCc-----
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANGE------REIGELIAKAMEKVGK---EGV----- 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~~------~~ls~lv~~A~~~v~~---~g~----- 64 (437)
+||+.|++||++|.+.++++|+++++|++ +.+.|.++|+||++++ +.|++|+++|+.++++ +|.
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~ 186 (518)
T 3iyg_D 107 IHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRD 186 (518)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccce
Confidence 59999999999999999999999999998 7889999999999985 8899999999999985 442
Q ss_pred --EEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHH--------
Q 013743 65 --ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLT-------- 121 (437)
Q Consensus 65 --I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~-------- 121 (437)
|.+.+|++..|+ ++++|++|+++|.| . ||..++||+|+++++++ ++++
T Consensus 187 I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~ 257 (518)
T 3iyg_D 187 IKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLRE 257 (518)
T ss_pred EEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHH
Confidence 455688998887 99999999999987 3 56678999999999975 3444
Q ss_pred ---HHHHHHHHHHhcCCCEEEE-----ecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEecc
Q 013743 122 ---AVVRVLELALKRQRPLLIV-----AEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 193 (437)
Q Consensus 122 ---~l~~~le~i~~~~~~lvi~-----~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~ 193 (437)
.+.++++++.+.|+||||+ +++|+++|+++|.+++ |+||++|+ +.+|+|||++|||+++++
T Consensus 258 E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~------I~av~~~~-----~~~le~ia~~tGa~ii~~ 326 (518)
T 3iyg_D 258 ERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK------IMVVKDIE-----REDIEFICKTIGTKPVAH 326 (518)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcC------cEEEecCC-----HHHHHHHHHHhCCEEecc
Confidence 3578899999999999999 8999999999999987 78999885 678999999999999999
Q ss_pred CcCCccccCCcCCCcceeEEEEe---c-ceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEE
Q 013743 194 ELGMDLEKVNLDMLGTCKKVTIS---K-DDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVL 269 (437)
Q Consensus 194 ~~~~~~~~~~~~~lG~~~~v~i~---~-~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI 269 (437)
++++++++||+|++|++. + ++++||++|++ ++++|||
T Consensus 327 -----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~----------------------------------~~~~~tI 367 (518)
T 3iyg_D 327 -----VDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS----------------------------------PGKTVTI 367 (518)
T ss_pred -----cccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC----------------------------------CCceEEE
Confidence 999999999999999963 4 68899999875 1458999
Q ss_pred EecCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHH
Q 013743 270 KIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAAN 347 (437)
Q Consensus 270 ~v~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~N 347 (437)
+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|
T Consensus 368 ~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~N 447 (518)
T 3iyg_D 368 VVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAEN 447 (518)
T ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 9999999999999999999877 7999999999999999999999999
Q ss_pred cCCCHHHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhc
Q 013743 348 AGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 414 (437)
Q Consensus 348 aG~d~~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~ 414 (437)
||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||+.
T Consensus 448 aG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 517 (518)
T 3iyg_D 448 AGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNT 517 (518)
T ss_pred cCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 9999999999999876 357999999999999999999999999999999999999999999999975
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.9e-72 Score=591.70 Aligned_cols=359 Identities=18% Similarity=0.228 Sum_probs=330.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhcc--CC-------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGK--EG------- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~--~g------- 63 (437)
+||+.|++||++|.+.++++|+++++|++ +.+.|.++|+||+++ ++.|++|+++|+.++++ +|
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I 194 (528)
T 3p9d_D 115 IHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDI 194 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGS
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEE
Confidence 59999999999999999999999999998 789999999999986 58999999999999987 34
Q ss_pred cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccCC-------------CHHH--------
Q 013743 64 VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTA-------- 122 (437)
Q Consensus 64 ~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~-------------~~~~-------- 122 (437)
.|.+++|++++|+ ++++|++|+++|.||+| |+..++||+|++++++|. ++++
T Consensus 195 ~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E 267 (528)
T 3p9d_D 195 RLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEE 267 (528)
T ss_dssp BCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHH
T ss_pred EEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHH
Confidence 2566779999987 99999999999999986 788999999999999864 4443
Q ss_pred ---HHHHHHHHHhcCCCEEEEecCC-----cHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccC
Q 013743 123 ---VVRVLELALKRQRPLLIVAEDV-----ESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEE 194 (437)
Q Consensus 123 ---l~~~le~i~~~~~~lvi~~~~i-----~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~ 194 (437)
+.+++++|.+.|+||||++++| ++.++++|.+++ |+||+++ ++++|+|||++|||+++++
T Consensus 268 ~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av~~~-----~k~~le~ia~~tGa~ii~~- 335 (528)
T 3p9d_D 268 RAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVVKDI-----EREEIEFLSKGLGCKPIAD- 335 (528)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEEECC-----CTHHHHHHHHHHTCCCCSC-
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEEEeC-----CHHHHHHHHHHHCCEEecc-
Confidence 6788999999999999999999 999999999887 6788744 6899999999999999999
Q ss_pred cCCccccCCcCCCcceeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEe
Q 013743 195 LGMDLEKVNLDMLGTCKKVTI---SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKI 271 (437)
Q Consensus 195 ~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v 271 (437)
++++++++||+|++|++ +++++++|++|.+.. .+++|||+|
T Consensus 336 ----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~--------------------------------~~~~~tI~l 379 (528)
T 3p9d_D 336 ----IELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN--------------------------------ARPTVSVVI 379 (528)
T ss_dssp ----STTCCSSSEEEESCEECCEETTEECCBCTTBCCGG--------------------------------GCCCCEEEC
T ss_pred ----cccCCHHHCCcccEEEEEEECCEEEEEEEcccccC--------------------------------CCceEEEEE
Confidence 89999999999999995 467899999987311 146899999
Q ss_pred cCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcC
Q 013743 272 GGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAG 349 (437)
Q Consensus 272 ~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG 349 (437)
||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||
T Consensus 380 rG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG 459 (528)
T 3p9d_D 380 RGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAG 459 (528)
T ss_dssp CCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTS
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999 9999999999999999999877 799999999999999999999999999
Q ss_pred CCHHHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhc
Q 013743 350 VEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 414 (437)
Q Consensus 350 ~d~~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~ 414 (437)
+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||+.
T Consensus 460 ~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (528)
T 3p9d_D 460 LNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFS 527 (528)
T ss_dssp SCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBC
T ss_pred CCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheec
Confidence 99999999999877 467999999999999999999999999999999999999999999999875
No 20
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-70 Score=577.02 Aligned_cols=355 Identities=17% Similarity=0.280 Sum_probs=324.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC----CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC-------C
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS----TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE-------G 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~----~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~-------g 63 (437)
+||+.|++||++|.+.++++|++++++++ |.+.|.++|+||+++ .+.|++++++|+..+.+. +
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~ 185 (515)
T 3iyg_E 106 IHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFE 185 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcc
Confidence 59999999999999999999999999885 368999999999987 368999999999998652 1
Q ss_pred --cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHH-----
Q 013743 64 --VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV----- 123 (437)
Q Consensus 64 --~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l----- 123 (437)
.|.+++|+++.|+ ++++|++|+++|.||+| +..+++|+|++++++ |++++++
T Consensus 186 ~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m-------~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~ 257 (515)
T 3iyg_E 186 LIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQM-------PKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQK 257 (515)
T ss_pred cEEEEEecCCCcccc-eEEeeEEEecccccccc-------cccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHH
Confidence 3677889999987 99999999999999986 455688999998886 4566665
Q ss_pred ------HHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCC
Q 013743 124 ------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 197 (437)
Q Consensus 124 ------~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~ 197 (437)
.++++++.+.|+||||++++|+++|+++|++|++ .+|+++ ++++|+|||++|||+++++
T Consensus 258 ~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~~v-----~k~~le~ia~~tGa~ii~~---- 322 (515)
T 3iyg_E 258 YEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVRWV-----GGPEIELIAIATGGRIVPR---- 322 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEecc----
Confidence 6789999999999999999999999999999985 577654 5899999999999999999
Q ss_pred ccccCCcCCCcceeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEec
Q 013743 198 DLEKVNLDMLGTCKKVTI-----SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIG 272 (437)
Q Consensus 198 ~~~~~~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~ 272 (437)
++++++++||+|++|++ .+++|+||++|+++ ..|||+||
T Consensus 323 -l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-----------------------------------~~~tI~lr 366 (515)
T 3iyg_E 323 -FSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-----------------------------------RAVTIFIR 366 (515)
T ss_pred -cccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC-----------------------------------ceEEEEEe
Confidence 99999999999999997 34899999999875 36899999
Q ss_pred CCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCC
Q 013743 273 GASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGV 350 (437)
Q Consensus 273 G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~ 350 (437)
|+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+|||+
T Consensus 367 G~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~ 446 (515)
T 3iyg_E 367 GGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGM 446 (515)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999 9999999999999999999877 7899999999999999999999999999
Q ss_pred CHHHHHHHHHhhC----CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhc
Q 013743 351 EGAVVVGKLLEQD----NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 414 (437)
Q Consensus 351 d~~~v~~~l~~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~ 414 (437)
|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||+.
T Consensus 447 d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 447 NPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred CHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 9999999999865 367999999999999999999999999999999999999999999999975
No 21
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4.5e-71 Score=584.79 Aligned_cols=364 Identities=17% Similarity=0.267 Sum_probs=326.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCC------HHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST------SEEIAQVGTISANG------EREIGELIAKAMEKVGKE------ 62 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~------~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~------ 62 (437)
+||+.|++||++|.+.++++|+++++++++ ++.|.++|+||+++ .+.|++++++|+..+.+.
T Consensus 141 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d 220 (562)
T 3p9d_E 141 IHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVD 220 (562)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCC
Confidence 699999999999999999999999998863 26899999999986 368999999999998652
Q ss_pred -C--cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHHH----
Q 013743 63 -G--VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTA---- 122 (437)
Q Consensus 63 -g--~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~~---- 122 (437)
+ .|.+++|++++|+ ++++|++|+++|.||+|+++.+ ....+++|+|+++++++ +++++
T Consensus 221 ~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~ 298 (562)
T 3p9d_E 221 FDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKL 298 (562)
T ss_dssp CCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHH
T ss_pred cccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHH
Confidence 1 3778899999998 9999999999999999865332 12234899999999863 45555
Q ss_pred -------HHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCc
Q 013743 123 -------VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEEL 195 (437)
Q Consensus 123 -------l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~ 195 (437)
+.+++++|.++|+|||||+++|+++|+++|++|++ .+|+++ ++++|+|||++|||+++++
T Consensus 299 ~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~v~~v-----~k~~le~ia~~TGa~iis~-- 365 (562)
T 3p9d_E 299 QTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PAVRWV-----GGQELEHIAISTNGRIVPR-- 365 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CCEECC-----CTTTHHHHHHHHCCCEEES--
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEEec--
Confidence 56889999999999999999999999999999985 466644 5889999999999999999
Q ss_pred CCccccCCcCCCcceeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEE
Q 013743 196 GMDLEKVNLDMLGTCKKVTI-----SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLK 270 (437)
Q Consensus 196 ~~~~~~~~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~ 270 (437)
++++++++||+|++|++ .+++|+||++|+++ ..|||+
T Consensus 366 ---l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~-----------------------------------~~~TIl 407 (562)
T 3p9d_E 366 ---FQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET-----------------------------------KTVTCF 407 (562)
T ss_dssp ---SSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC-----------------------------------SCCEEE
T ss_pred ---cccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC-----------------------------------CeEEEE
Confidence 99999999999999998 35899999999875 368999
Q ss_pred ecCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHc
Q 013743 271 IGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANA 348 (437)
Q Consensus 271 v~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~Na 348 (437)
|||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++++|+++++|++||+.||++||+||
T Consensus 408 lrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na 487 (562)
T 3p9d_E 408 VRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENS 487 (562)
T ss_dssp EECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTT
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999 9999999999999999999877 78999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhC----CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCc
Q 013743 349 GVEGAVVVGKLLEQD----NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 417 (437)
Q Consensus 349 G~d~~~v~~~l~~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~ 417 (437)
|+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...+.
T Consensus 488 G~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 488 GLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp TSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred CCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999865 467999999999999999999999999999999999999999999999987543
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=8.3e-72 Score=587.52 Aligned_cols=361 Identities=18% Similarity=0.283 Sum_probs=327.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCC-----HHHHHHHHHHhcCC------chhHHHHHHHHHHHhccCC---c--
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST-----SEEIAQVGTISANG------EREIGELIAKAMEKVGKEG---V-- 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~-----~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~g---~-- 64 (437)
+||+.|++||++|.+.++++|+++++++++ .+.|.++|+||+++ ++.|++|+++|+.++++++ .
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~ 194 (527)
T 3p9d_B 115 IHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQ 194 (527)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEE
Confidence 599999999999999999999999999984 68999999999987 5789999999999999987 4
Q ss_pred EEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccC--------------CCHHHH-------
Q 013743 65 ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI--------------SNLTAV------- 123 (437)
Q Consensus 65 I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i--------------~~~~~l------- 123 (437)
|.+++|+++.|+ ++++|++|+++|.||+ +..++||+|++++++| ++++++
T Consensus 195 V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E 265 (527)
T 3p9d_B 195 IIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAE 265 (527)
T ss_dssp CCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHH
T ss_pred EEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHH
Confidence 445579999987 9999999999999985 3456899999998863 445554
Q ss_pred ----HHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCcc
Q 013743 124 ----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (437)
Q Consensus 124 ----~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~ 199 (437)
.+.+++|.++|+||||++++|++.++++|.+++ |++|+++ ++.+|+|+|++|||+++++ +
T Consensus 266 ~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~-----~~~dle~ia~~tGa~iv~~-----~ 329 (527)
T 3p9d_B 266 REKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHA-----DFEGVERLALVTGGEVVST-----F 329 (527)
T ss_dssp HHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCC-----HHHHHHHHHHHTCCCCCST-----T
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecC-----CHHHHHHHHHHhCCEEecc-----h
Confidence 578899999999999999999999999999998 5788755 5789999999999999999 9
Q ss_pred ccCCcCCCcceeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCch
Q 013743 200 EKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASE 276 (437)
Q Consensus 200 ~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~ 276 (437)
+++++++||+|+.|+ +++++++||++|+++ ++|||+|||+|+
T Consensus 330 ~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~tI~lrg~te 374 (527)
T 3p9d_B 330 DEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAG-----------------------------------EACTIVLRGATD 374 (527)
T ss_dssp SCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCS-----------------------------------CCEECBCCTTCT
T ss_pred hhCCHHHCCCCcEEEEEEecceEEEEEECCCCC-----------------------------------CEEEEEEcCCCH
Confidence 999999999999999 568999999998863 589999999999
Q ss_pred hHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHH
Q 013743 277 AEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAV 354 (437)
Q Consensus 277 ~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 354 (437)
.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+ ++.+|+++++|++||+.||++||+|||+|+.+
T Consensus 375 ~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 454 (527)
T 3p9d_B 375 QTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSE 454 (527)
T ss_dssp THHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 999999999999999999999999 9999999999999999999876 78999999999999999999999999999999
Q ss_pred HHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCCccCCC
Q 013743 355 VVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEEKE 421 (437)
Q Consensus 355 v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~~~~~~ 421 (437)
++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+++.+
T Consensus 455 vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 455 LVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp HHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred HHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 999999876 4679999999999999999999999999999999999999999999999988776544
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.4e-70 Score=571.76 Aligned_cols=354 Identities=20% Similarity=0.314 Sum_probs=319.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC-CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccCC--------cE
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS-TSEEIAQVGTISANG------EREIGELIAKAMEKVGKEG--------VI 65 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~-~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~g--------~I 65 (437)
+||+.|++||++|.+.++++|++++++++ +.+.|.++|+||+++ .+.|++++++|+..+.+++ .|
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I 185 (517)
T 3iyg_Z 106 LHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEI 185 (517)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHhee
Confidence 59999999999999999999999999998 888999999999986 3789999999999886542 37
Q ss_pred EEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHHHH---------
Q 013743 66 TIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTAV--------- 123 (437)
Q Consensus 66 ~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~~l--------- 123 (437)
.+++|++..|+ ++++|++|+++|.||+ |++.++||+|+++|++| ++++++
T Consensus 186 ~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~ 257 (517)
T 3iyg_Z 186 MEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERK 257 (517)
T ss_pred eeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHH
Confidence 88999999988 9999999999999997 67889999999999975 334443
Q ss_pred --HHHHHHHHhcCCC---------EEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEec
Q 013743 124 --VRVLELALKRQRP---------LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLIT 192 (437)
Q Consensus 124 --~~~le~i~~~~~~---------lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~ 192 (437)
...+++|...+.+ |||++++|++.++++|.+++ |++|++. ++++|+|||++|||++++
T Consensus 258 ~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v~~v-----~~~~leria~~tGa~iv~ 326 (517)
T 3iyg_Z 258 FIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEG------IIALRRA-----KRRNMERLTLACGGIALN 326 (517)
T ss_pred HHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCC------CEEEEec-----CHHHHHHHHHHhCCEEec
Confidence 2345556555544 36778999999999999987 5777643 688999999999999999
Q ss_pred cCcCCccccCCcCC-CcceeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEE
Q 013743 193 EELGMDLEKVNLDM-LGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAV 268 (437)
Q Consensus 193 ~~~~~~~~~~~~~~-lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~t 268 (437)
+ ++++++++ ||+|+ |+ +++++|+||++|++++ .||
T Consensus 327 ~-----l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~-----------------------------------~~T 365 (517)
T 3iyg_Z 327 S-----LDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR-----------------------------------SVT 365 (517)
T ss_pred c-----hhhCcccccCCcce-EEEEEEcCceEEEEeCCCCch-----------------------------------hhe
Confidence 9 99999999 99999 94 6789999999998753 589
Q ss_pred EEecCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHH
Q 013743 269 LKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAA 346 (437)
Q Consensus 269 I~v~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~ 346 (437)
|+|||+|+.+++|.||+++|||+++|+++++| +|||||++|+++|.+|++++.+ ++++|+++++|++||+.+|++||+
T Consensus 366 I~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~ 445 (517)
T 3iyg_Z 366 LLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQ 445 (517)
T ss_pred eeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 9999999999999999999887 799999999999999999999999
Q ss_pred HcCCCHHHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhc
Q 013743 347 NAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 414 (437)
Q Consensus 347 NaG~d~~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~ 414 (437)
|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+||..
T Consensus 446 NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 446 NSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred HcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999877 467999999999999999999999999999999999999999999999865
No 24
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-69 Score=568.99 Aligned_cols=354 Identities=18% Similarity=0.288 Sum_probs=321.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhc----cccCCCHHHHHHHHHHhcCC-----chhHHHHHHHHHHHhccC-C-------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSR----ARMISTSEEIAQVGTISANG-----EREIGELIAKAMEKVGKE-G------- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~----s~~v~~~~~L~~va~ts~~~-----~~~ls~lv~~A~~~v~~~-g------- 63 (437)
+||+.|++||++|.+.++++|+++ +.++++.+.|.++|+||+++ ++.|++|+++|+.+++++ +
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I 186 (512)
T 3iyg_Q 107 LSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNI 186 (512)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHe
Confidence 599999999999999999999998 56667899999999999987 688999999999999886 3
Q ss_pred cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEeccc-------------CCCHHHHHHH----
Q 013743 64 VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAVVRV---- 126 (437)
Q Consensus 64 ~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~-------------i~~~~~l~~~---- 126 (437)
.|.+.+|+++.|+ ++++|++|+++|.| |+..++||+|++++++ |++++++.++
T Consensus 187 ~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E 256 (512)
T 3iyg_Q 187 RVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGE 256 (512)
T ss_pred eEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHH
Confidence 2567789999877 99999999999865 3556789999998886 4567777665
Q ss_pred ---HH----HHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCcc
Q 013743 127 ---LE----LALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (437)
Q Consensus 127 ---le----~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~ 199 (437)
++ +|.++|+||||++++|++.++++|.+++ |+||++|+ +.+|+|||++|||+++++ +
T Consensus 257 ~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~------I~av~~~~-----~~dle~ia~~tGa~iis~-----l 320 (512)
T 3iyg_Q 257 ENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYN------IMLVRLNS-----KWDLRRLCKTVGATALPR-----L 320 (512)
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eEEEEeCC-----HHHHHHHHHHhCCEEecc-----c
Confidence 44 8999999999999999999999998766 79999875 678999999999999999 9
Q ss_pred ccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCch
Q 013743 200 EKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASE 276 (437)
Q Consensus 200 ~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~ 276 (437)
+++++++||+|++|++. ++++++|++|+. ++++|||+|||+|+
T Consensus 321 ~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~----------------------------------~~~~~tI~lrG~te 366 (512)
T 3iyg_Q 321 NPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE----------------------------------DGAISTIVLRGSTD 366 (512)
T ss_pred ccCCHHHCCcccEEEEEEeCCeEEEEEEcccC----------------------------------CCceEEEEECCCcH
Confidence 99999999999999974 578999998753 24689999999999
Q ss_pred hHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHH
Q 013743 277 AEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAV 354 (437)
Q Consensus 277 ~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~ 354 (437)
.+++|+||+++|||+++|+++++| +|||||++|+++|.+|++++.+ ++.+|+++++|++||+.||++||+|||+|+.+
T Consensus 367 ~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 446 (512)
T 3iyg_Q 367 NLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANE 446 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999999 9999999999999999999876 78999999999999999999999999999999
Q ss_pred HHHHHHhhC---CCceeEeCCCC--ccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhc
Q 013743 355 VVGKLLEQD---NTDLGYDAAKG--EYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 414 (437)
Q Consensus 355 v~~~l~~~~---~~~~Gid~~~g--~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~ 414 (437)
++.+|++.| +.++|||+.+| ++.||++.|||||+.||+++|+.|+|+|++|||||+||+.
T Consensus 447 ~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 447 VISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred HHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 999999876 57899999965 9999999999999999999999999999999999999975
No 25
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.2e-70 Score=582.11 Aligned_cols=364 Identities=18% Similarity=0.234 Sum_probs=314.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccC----CCHHHHHHHHHHhcCC-----chhHHHHHHHHHHHhccC-----C---
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMI----STSEEIAQVGTISANG-----EREIGELIAKAMEKVGKE-----G--- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v----~~~~~L~~va~ts~~~-----~~~ls~lv~~A~~~v~~~-----g--- 63 (437)
+||+.|++||++|.+.++++|++++.++ ++.+.|.++|+||+++ ++.|++|+++|+.+++++ |
T Consensus 122 ihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~ 201 (568)
T 3p9d_H 122 LSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPY 201 (568)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcc
Confidence 6999999999999999999999999877 4788999999999864 588999999999999874 3
Q ss_pred ------cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeec---CceEEEeccc-------------CCCHH
Q 013743 64 ------VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELE---DPLILVHEKK-------------ISNLT 121 (437)
Q Consensus 64 ------~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~---~p~Ill~d~~-------------i~~~~ 121 (437)
.|.+++|++++|+ ++++|++|+++|. .|++.++ ||||++++++ |++++
T Consensus 202 ~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~ 271 (568)
T 3p9d_H 202 FNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQ 271 (568)
T ss_dssp CCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHH
T ss_pred cccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHH
Confidence 2667889999998 9999999999873 3677888 9999999997 56777
Q ss_pred HHHH-----------HHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeE
Q 013743 122 AVVR-----------VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDL 190 (437)
Q Consensus 122 ~l~~-----------~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~i 190 (437)
++.+ ++++|.+.|+||||++++|++.|+++|.+++ |+||+++ ++.+|+|||++|||++
T Consensus 272 ~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~av~~v-----~~~~leria~~tGa~i 340 (568)
T 3p9d_H 272 EMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYG------ILVLKVP-----SKFELRRLCRVCGATP 340 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHT------CEEECCC-----CHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCC------eEEEecC-----CHHHHHHHHHHhCCEE
Confidence 7654 7889999999999999999999999999987 6899877 4889999999999999
Q ss_pred eccCcCCccccCCcCCCcceeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeE
Q 013743 191 ITEELGMDLEKVNLDMLGTCKKVTIS---KDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVA 267 (437)
Q Consensus 191 i~~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~ 267 (437)
+++ ++++++++||+|+.|++. +++|+||++|+. |++++|
T Consensus 341 vs~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------------------------l~~~~~ 382 (568)
T 3p9d_H 341 LPR-----LGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG---------------------------------EISRTS 382 (568)
T ss_dssp CSS-----SSCCCGGGCEECSCCCCCEETTEECBCCCCCSS---------------------------------SCCSSC
T ss_pred Eec-----cccCCHHHCCcceEEEEEEecCceEEEEecCCC---------------------------------CCCCeE
Confidence 999 999999999999999864 589999999872 124689
Q ss_pred EEEecCCchhHHHHhHhhHhhHHHHHHHHHH--cC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHH
Q 013743 268 VLKIGGASEAEVGEKKDRVTDALNATKAAVE--EG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHT 343 (437)
Q Consensus 268 tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~--~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~ 343 (437)
||+|||+|+.+++|.||+++|||+++|++++ ++ +|||||++|+++|.+|++++.+ ++++|+++++|++||+.||++
T Consensus 383 TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~ 462 (568)
T 3p9d_H 383 TIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRT 462 (568)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 76 9999999999999999999877 799999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHhhCC-----------CceeEeCCCCc---cccccccCccccchhHHHHHHHHHHHHHHhhchh
Q 013743 344 IAANAGVEGAVVVGKLLEQDN-----------TDLGYDAAKGE---YVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTE 409 (437)
Q Consensus 344 L~~NaG~d~~~v~~~l~~~~~-----------~~~Gid~~~g~---i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id 409 (437)
||+|||+|+.+++.+|++.|. +++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||
T Consensus 463 La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD 542 (568)
T 3p9d_H 463 LAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSID 542 (568)
T ss_dssp HHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC----
T ss_pred HHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999998762 37999999997 9999999999999999999999999999999999
Q ss_pred hhhhcCCccCCCCC
Q 013743 410 AIVVELPKEEKEAP 423 (437)
Q Consensus 410 ~iI~~~~~~~~~~~ 423 (437)
++|...|...|+||
T Consensus 543 ~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 543 QIIMAKKAGGPRAP 556 (568)
T ss_dssp --------------
T ss_pred HHhhccccCCCCCC
Confidence 99999888777655
No 26
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=8.9e-70 Score=573.92 Aligned_cols=357 Identities=18% Similarity=0.275 Sum_probs=316.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC----CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC-C------
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS----TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE-G------ 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~----~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~-g------ 63 (437)
+||+.|++||++|.+.++++|++++++++ +.+.|.++|+||+++ .+.|++++++|+..+.+. +
T Consensus 113 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~ 192 (546)
T 3p9d_F 113 VHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLH 192 (546)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGG
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccch
Confidence 59999999999999999999999999884 678999999999986 378999999999998642 1
Q ss_pred --cEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccCC-------------CHHHH-----
Q 013743 64 --VITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTAV----- 123 (437)
Q Consensus 64 --~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~-------------~~~~l----- 123 (437)
.|.+++|++..|+ ++++|++|+++|.||. |+++++||+|++++++|. +++++
T Consensus 193 ~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~ 264 (546)
T 3p9d_F 193 MVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAA 264 (546)
T ss_dssp GEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHH
T ss_pred heEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHH
Confidence 3667889999998 9999999999999985 688999999999998752 22222
Q ss_pred ------HHHHHHHHhc---------CCC-EEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhC
Q 013743 124 ------VRVLELALKR---------QRP-LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTG 187 (437)
Q Consensus 124 ------~~~le~i~~~---------~~~-lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG 187 (437)
...+++|... |+| |||++++|+++|+++|.+|+ |++|++ +++++|+|||++||
T Consensus 265 ~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~-----v~~~~leria~~tG 333 (546)
T 3p9d_F 265 SERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRR-----AKRRNMERLQLVTG 333 (546)
T ss_dssp HHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT------CEEECC-----CCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEec-----CCHHHHHHHHHHhC
Confidence 2345555543 444 77888999999999999998 577764 46889999999999
Q ss_pred CeEeccCcCCccccCCcCCCcceeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcC
Q 013743 188 GDLITEELGMDLEKVNLDMLGTCKKVT---ISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSG 264 (437)
Q Consensus 188 ~~ii~~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g 264 (437)
|+++++ ++++++++||+|++|+ +++++|+||++|++++
T Consensus 334 a~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~---------------------------------- 374 (546)
T 3p9d_F 334 GEAQNS-----VEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPK---------------------------------- 374 (546)
T ss_dssp BCCCCC-----CSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCS----------------------------------
T ss_pred CEEecc-----hhhCCHhHCCcccEEEEEEecCceEEEEecCCCCc----------------------------------
Confidence 999999 9999999999999995 6789999999998753
Q ss_pred CeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHh---hccc-chhHHHHHHHHHHHhhH
Q 013743 265 GVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEK---LSTA-NFDQKIGVQIIQNALKT 339 (437)
Q Consensus 265 ~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~---~~~~-~~~~~~~~~~~a~AL~~ 339 (437)
.|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|+++|.+|++ |+.+ ++++|+++++|++||+.
T Consensus 375 -~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ 453 (546)
T 3p9d_F 375 -SCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLV 453 (546)
T ss_dssp -CEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHH
T ss_pred -eEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999 999999999999999998 5666 79999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHhhC--------CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhh
Q 013743 340 PVHTIAANAGVEGAVVVGKLLEQD--------NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAI 411 (437)
Q Consensus 340 ip~~L~~NaG~d~~~v~~~l~~~~--------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~i 411 (437)
||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+|
T Consensus 454 ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~i 533 (546)
T 3p9d_F 454 IPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDEL 533 (546)
T ss_dssp HHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998764 356999999999999999999999999999999999999999999999
Q ss_pred hhcCC
Q 013743 412 VVELP 416 (437)
Q Consensus 412 I~~~~ 416 (437)
|+..+
T Consensus 534 i~~~~ 538 (546)
T 3p9d_F 534 LRAGR 538 (546)
T ss_dssp EEECC
T ss_pred HcCCc
Confidence 98743
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-45 Score=328.82 Aligned_cols=193 Identities=51% Similarity=0.854 Sum_probs=189.1
Q ss_pred eeeEeceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcc
Q 013743 77 LEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNK 156 (437)
Q Consensus 77 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~ 156 (437)
+++++|+.|++||+||||+|++++|..+++||+||++|.+|+++++++|+||++.+.++||+|++++|+.+||.+|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHH
Q 013743 157 LRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERC 236 (437)
Q Consensus 157 i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~ 236 (437)
++|.++|||||+|+||+.++..|+|||.+|||++++.+.++++++++.++||+|++|.++++.++++.|.+++++|++||
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEE
Q 013743 237 EQIRSAIENSTSDYDKEKLQERLAKLSGGVAVL 269 (437)
Q Consensus 237 ~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI 269 (437)
++|+++++.+.|+|+|++|+|||++|+|+++.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998754
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=5.2e-44 Score=320.08 Aligned_cols=187 Identities=56% Similarity=0.913 Sum_probs=184.2
Q ss_pred eceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccC
Q 013743 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (437)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~ 160 (437)
+|+.|++||+||||+|+.++|..+++||+||++|.+|+++++++|+||++.+.++||||++++|+.+||.+|+.|+++|.
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~ 92 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGI 92 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTS
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccce
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHH
Q 013743 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (437)
Q Consensus 161 ~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~ 240 (437)
++|||||+|+||+.++..|+|||.+|||++++.+.++++++++.++||+|++|.++++.|+++.|.+++++|++||++|+
T Consensus 93 l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qIr 172 (201)
T 3osx_A 93 VKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQIR 172 (201)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHHHHHHHhhcCCeE
Q 013743 241 SAIENSTSDYDKEKLQERLAKLSGGVA 267 (437)
Q Consensus 241 ~~l~~~~~~~~~~~l~~rl~rl~g~~~ 267 (437)
++++.+.|+|+||+|+|||++|+|+++
T Consensus 173 ~qie~t~S~ydkEKLqERLAKLsGGVA 199 (201)
T 3osx_A 173 QQIEESTSDYDREKLQERVAKLAGGVK 199 (201)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 999999999999999999999999976
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=2.1e-34 Score=246.19 Aligned_cols=144 Identities=52% Similarity=0.898 Sum_probs=141.6
Q ss_pred ceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCc
Q 013743 82 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGI 161 (437)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~ 161 (437)
|+.|++||+||||+|+.++|..+++||+||++|.+|+++++++|+||++.+.|+||+|++++|+.+||.+|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcC
Q 013743 162 KVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDG 225 (437)
Q Consensus 162 ~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~ 225 (437)
+|||||+|+||+.++..|+|||.+|||++++.+.++++++.+.++||+|++|.+++++++++.|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.93 E-value=2.7e-25 Score=201.62 Aligned_cols=145 Identities=17% Similarity=0.291 Sum_probs=122.1
Q ss_pred ccceeeEeceEEeecccCcccccccccCceeecCceEEEecccCC-------------CHHH-----------HHHHHHH
Q 013743 74 YNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTA-----------VVRVLEL 129 (437)
Q Consensus 74 ~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~-------------~~~~-----------l~~~le~ 129 (437)
+|| ++++|++|++++.++. ||+.++||||++++++|. ++++ +.+.+++
T Consensus 2 ~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~k 73 (178)
T 1gml_A 2 EDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCED 73 (178)
T ss_dssp -CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHH
T ss_pred CCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHH
Confidence 577 9999999999998864 688899999999999753 2222 3567889
Q ss_pred HHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcc
Q 013743 130 ALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGT 209 (437)
Q Consensus 130 i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~ 209 (437)
|+++|+||||++++|+|.|++||.+++ |+||+ ++++++|+|||++|||+++++ ++++++++||+
T Consensus 74 I~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~vr-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~ 137 (178)
T 1gml_A 74 IIQLKPDVVITEKGISDLAQHYLMRAN------VTAIR-----RVRKTDNNRIARACGARIVSR-----PEELREDDVGT 137 (178)
T ss_dssp HHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----CCCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBC
T ss_pred HhhcCCcEEEECCcccHHHHHHHHHCC------CEEEe-----cCCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCC
Confidence 999999999999999999999999998 57875 457999999999999999999 99999999999
Q ss_pred -eeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHHHHHHHHHHHhhcCCeEEEEecCCchh
Q 013743 210 -CKKVTI---SKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA 277 (437)
Q Consensus 210 -~~~v~i---~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~l~~rl~rl~g~~~tI~v~G~t~~ 277 (437)
|+.|++ ++++++||++|+++ ..|||+|||+|..
T Consensus 138 ~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 138 GAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred cccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 999995 57899999999875 3799999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.86 E-value=2.5e-21 Score=172.23 Aligned_cols=127 Identities=17% Similarity=0.325 Sum_probs=110.4
Q ss_pred EeceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHHH-----------HHHHHHHHHhcCC
Q 013743 80 VEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTA-----------VVRVLELALKRQR 135 (437)
Q Consensus 80 ~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~~-----------l~~~le~i~~~~~ 135 (437)
++|++|++++.||. ||+.++||||++++++| +++++ +...+++|+++|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 47999999998874 68889999999999975 34443 3457889999999
Q ss_pred CEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEE
Q 013743 136 PLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTI 215 (437)
Q Consensus 136 ~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i 215 (437)
||||++++|+|.|++||.+++ |+||+ ++++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v~-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEEc-----cCCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 999999999999999999998 57875 457999999999999999999 99999999999999995
Q ss_pred ---ecceEEEEcCCCCh
Q 013743 216 ---SKDDTVILDGAGDK 229 (437)
Q Consensus 216 ---~~~~~~~~~~~~~~ 229 (437)
++++++||++|++-
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 57899999999863
No 32
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=71.82 E-value=0.79 Score=47.78 Aligned_cols=15 Identities=27% Similarity=0.682 Sum_probs=8.9
Q ss_pred HHHHHHHH-HhccCCc
Q 013743 50 ELIAKAME-KVGKEGV 64 (437)
Q Consensus 50 ~lv~~A~~-~v~~~g~ 64 (437)
.-++++++ .+||.|.
T Consensus 29 ~~la~~vkttLGPkG~ 44 (543)
T 3ruv_A 29 RIIAETVRSTLGPKGM 44 (543)
T ss_dssp HHHHHHHHTTCSTTCC
T ss_pred HHHHHHHHhccCCCCC
Confidence 34556666 3677775
No 33
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=37.01 E-value=37 Score=30.64 Aligned_cols=57 Identities=9% Similarity=0.013 Sum_probs=37.7
Q ss_pred HHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCC
Q 013743 127 LELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGG 188 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~ 188 (437)
+|+|...+++|||.....++.....|.+.++ +++.+....+.++ .+.++.++.++|-
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~-~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNM----KGYFYDFDSLKGM-QKSITQLGDQFNR 109 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTS----CCEEECCSSHHHH-HHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCC----cEEEecCCCHHHH-HHHHHHHHHHhCC
Confidence 6778889999999877665666667765553 3566643222222 4667788888775
No 34
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=27.40 E-value=1.1e+02 Score=27.18 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=39.8
Q ss_pred HHHHHhcCCCEEEEecCCc-HHHHHHHHHcccccCceEEEEec-CCCCcchhhhHHHHHHHhCCe
Q 013743 127 LELALKRQRPLLIVAEDVE-SEALATLILNKLRAGIKVCAIKA-PGFGENRKANMQDLAVLTGGD 189 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~i~-~~al~~l~~n~i~~~~~v~aV~~-~~~~~~~~~~le~la~~tG~~ 189 (437)
+|+|...+++|||...... ......|.+.++ +++.+.. ..+.++ .+.++.++.++|-.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~~-~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGV----NVVTVPGQTTPESV-AMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTC----EEEEECCCCSHHHH-HHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCC----cEEEeCCCCCHHHH-HHHHHHHHHHhCCH
Confidence 6788899999999887654 456667765543 4666643 222222 57789999999963
No 35
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=27.06 E-value=58 Score=29.09 Aligned_cols=57 Identities=18% Similarity=0.146 Sum_probs=33.3
Q ss_pred HHHHHhcCCCEEEEec-CCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCC
Q 013743 127 LELALKRQRPLLIVAE-DVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGG 188 (437)
Q Consensus 127 le~i~~~~~~lvi~~~-~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~ 188 (437)
+|+|...+++|||... ..++.....|.+.++ +++.+....+.++ .+.++.++.++|-
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~-~~~i~~lg~~lg~ 107 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGI----KVMWVDATSIEQI-ANALRQLAPWSPQ 107 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTC----CEEECCCCSHHHH-HHHHHHHGGGCSC
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCC----cEEEeCCCCHHHH-HHHHHHHHHHhCC
Confidence 6788889999999853 466677777765553 3555432221121 2445555555443
No 36
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=26.23 E-value=1.2e+02 Score=27.05 Aligned_cols=57 Identities=21% Similarity=0.114 Sum_probs=37.5
Q ss_pred HHHHHhcCCCEEEEecC-CcHHHHHHHHHcccccCceEEEEecC--CCCcchhhhHHHHHHHhCC
Q 013743 127 LELALKRQRPLLIVAED-VESEALATLILNKLRAGIKVCAIKAP--GFGENRKANMQDLAVLTGG 188 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~-i~~~al~~l~~n~i~~~~~v~aV~~~--~~~~~~~~~le~la~~tG~ 188 (437)
+|+|...+++|||.... .+......|.+.++ +++.+..+ .+.++ .+.++.++.++|-
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~~~-~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKV----NVVTLPRVPATLEQM-YANIRQLAKTLQV 111 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTC----EEEEECCCSCCHHHH-HHHHHHHHHHTTC
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCC----cEEEecCCCCCHHHH-HHHHHHHHHHhCC
Confidence 67888999999998764 45667777766553 46666432 22222 3567778888775
No 37
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=24.82 E-value=1.1e+02 Score=22.70 Aligned_cols=53 Identities=15% Similarity=0.242 Sum_probs=31.8
Q ss_pred HHHHHHhcCCCEEEEecCCcHHHHHHHHH-cccccCceEEEEecCCCCcchhhhHHHHHHHhCCe
Q 013743 126 VLELALKRQRPLLIVAEDVESEALATLIL-NKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGD 189 (437)
Q Consensus 126 ~le~i~~~~~~lvi~~~~i~~~al~~l~~-n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ 189 (437)
.++.+.+....+||++.|+++.....|.. ....+ ++++-+. ..++|..++|-.
T Consensus 19 v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~-Ip~~~v~----------sk~eLG~a~Gk~ 72 (82)
T 3v7e_A 19 TVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQG-ISVSMVE----------SMKKLGKACGIE 72 (82)
T ss_dssp HHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHT-CCEEEES----------CHHHHHHHHTCS
T ss_pred HHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcC-CCEEEEC----------CHHHHHHHhCCC
Confidence 44555556688999999999976665532 11112 2344431 236788888753
No 38
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=24.35 E-value=1e+02 Score=29.08 Aligned_cols=56 Identities=9% Similarity=0.049 Sum_probs=38.1
Q ss_pred HHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCC
Q 013743 127 LELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGG 188 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~ 188 (437)
+|+|...+++|||.... .......|.+.++ +++.+....+.++ .+.++.|+.++|-
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gi----pvv~~~~~~~~~~-~~~i~~lg~~lg~ 164 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGI----KAVVVNPEDQSLL-EECITLVGKITNN 164 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTC----CEEEECCCSHHHH-HHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCC----CEEEEcCCCHHHH-HHHHHHHHHHcCC
Confidence 67888999999998765 4555666755543 4667653333333 4678888888886
No 39
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=23.65 E-value=45 Score=30.54 Aligned_cols=43 Identities=12% Similarity=0.251 Sum_probs=32.2
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHHhcCCCEEEEecCCcHH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVESE 147 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~~~~~~lvi~~~~i~~~ 147 (437)
+.+|+++++|-|... .+++.+.+..+.+.|..+|++..+.+..
T Consensus 169 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~~~ 216 (257)
T 1g6h_A 169 MTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIV 216 (257)
T ss_dssp HTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTT
T ss_pred HcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHH
Confidence 479999999998654 3456777777766688888888887653
No 40
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=23.48 E-value=65 Score=28.65 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=31.4
Q ss_pred ecCceEEEecccCC-----CHHHHHHHHHHHHhcCCCEEEEecCCcH
Q 013743 105 LEDPLILVHEKKIS-----NLTAVVRVLELALKRQRPLLIVAEDVES 146 (437)
Q Consensus 105 l~~p~Ill~d~~i~-----~~~~l~~~le~i~~~~~~lvi~~~~i~~ 146 (437)
+.+|+++++|-|.. +.+++.+.+..+.+.|..+|++..+.+.
T Consensus 149 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~ 195 (214)
T 1sgw_A 149 LVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREELS 195 (214)
T ss_dssp TSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCCT
T ss_pred HhCCCEEEEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 57999999999853 4556777787776667788888877653
No 41
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=22.41 E-value=63 Score=29.16 Aligned_cols=42 Identities=14% Similarity=0.317 Sum_probs=30.1
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHHhcCCCEEEEecCCcH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVES 146 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~~~~~~lvi~~~~i~~ 146 (437)
+.+|+++++|-|... .+++.+.+..+.+.|..+|++..+.+.
T Consensus 155 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tvi~vtHd~~~ 201 (240)
T 1ji0_A 155 MSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALG 201 (240)
T ss_dssp TTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHHH
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHH
Confidence 478999999988654 334667777776667888888877543
No 42
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=21.32 E-value=1.5e+02 Score=27.03 Aligned_cols=57 Identities=21% Similarity=0.214 Sum_probs=37.2
Q ss_pred HHHHHhcCCCEEEEecCC-cHHHHHHHHHcccccCceEEEEecC-CCCcchhhhHHHHHHHhCC
Q 013743 127 LELALKRQRPLLIVAEDV-ESEALATLILNKLRAGIKVCAIKAP-GFGENRKANMQDLAVLTGG 188 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~i-~~~al~~l~~n~i~~~~~v~aV~~~-~~~~~~~~~le~la~~tG~ 188 (437)
+|+|...+++|||..... +......|.+.++ +++.+..+ .+.++ .+.++.++.++|-
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~~-~~~i~~lg~~~g~ 110 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGV----RVETLSAKPDLEAL-ESNLKKLGDWLGV 110 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTC----CEEECCCCSSHHHH-HHHHHHHHHHHTC
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCC----cEEEecCCCCHHHH-HHHHHHHHHHhCC
Confidence 678889999999987643 4566677766553 35555322 12222 4677888888875
No 43
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=21.22 E-value=62 Score=29.69 Aligned_cols=42 Identities=14% Similarity=0.373 Sum_probs=31.4
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHHhcCCCEEEEecCCcH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVES 146 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~~~~~~lvi~~~~i~~ 146 (437)
+.+|+++++|-|... .+++.+.+..+.+.|..+|++..+++.
T Consensus 169 ~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~~ 215 (262)
T 1b0u_A 169 AMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGF 215 (262)
T ss_dssp HTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 579999999998654 345677777776668888888887654
No 44
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=20.55 E-value=2.1e+02 Score=26.52 Aligned_cols=59 Identities=17% Similarity=0.130 Sum_probs=39.6
Q ss_pred HHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCC-------------------cchhhhHHHHHHHhC
Q 013743 127 LELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFG-------------------ENRKANMQDLAVLTG 187 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~-------------------~~~~~~le~la~~tG 187 (437)
+|+|...+++|||.....++.....|.+.++ +++.+...... .--.+.++.++.++|
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gi----pvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg 152 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNI----PVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFE 152 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTC----CEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCC----CEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcC
Confidence 6788889999999876666667777765544 47777543210 001467888999998
Q ss_pred Ce
Q 013743 188 GD 189 (437)
Q Consensus 188 ~~ 189 (437)
-.
T Consensus 153 ~e 154 (326)
T 3psh_A 153 KK 154 (326)
T ss_dssp CH
T ss_pred CH
Confidence 63
Done!