Query 013743
Match_columns 437
No_of_seqs 117 out of 1468
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 16:17:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013743.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013743hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kida_ c.8.5.1 (A:) GroEL, A 100.0 1.9E-40 1.4E-44 301.1 16.6 189 78-266 5-193 (193)
2 d1sjpa2 c.8.5.1 (A:189-372) Gr 100.0 3.4E-39 2.5E-43 291.2 18.3 184 82-265 1-184 (184)
3 d1ioka2 c.8.5.1 (A:191-366) Gr 100.0 6.1E-37 4.5E-41 274.0 12.5 176 81-256 1-176 (176)
4 d1srva_ c.8.5.1 (A:) GroEL, A 100.0 6.6E-32 4.8E-36 233.2 13.4 144 82-225 1-144 (145)
5 d1a6db1 a.129.1.2 (B:20-144,B: 99.9 3.3E-27 2.4E-31 222.2 14.2 154 252-413 84-243 (243)
6 d1a6da1 a.129.1.2 (A:17-145,A: 99.9 3E-24 2.2E-28 202.4 12.6 141 272-412 100-245 (245)
7 d1we3a1 a.129.1.1 (A:3-138,A:4 99.9 3.9E-24 2.8E-28 202.9 7.2 197 213-416 45-255 (255)
8 d1gmla_ c.8.5.2 (A:) Thermosom 99.9 1.3E-22 9.7E-27 180.3 13.9 131 75-229 1-159 (168)
9 d1a6db2 c.8.5.2 (B:216-367) Th 99.8 2.3E-21 1.7E-25 169.2 12.4 125 82-229 1-152 (152)
10 d1q3qa2 c.8.5.2 (A:217-369) Th 99.8 3.1E-21 2.2E-25 168.7 13.1 126 81-229 1-153 (153)
11 d1assa_ c.8.5.2 (A:) Thermosom 99.8 4.1E-21 3E-25 167.7 13.1 125 80-227 1-152 (152)
12 d1ioka1 a.129.1.1 (A:2-136,A:4 99.8 2.5E-21 1.8E-25 183.0 9.8 239 165-416 1-252 (252)
13 d1sjpa1 a.129.1.1 (A:62-134,A: 99.8 1.4E-20 1E-24 168.7 9.9 133 272-409 46-180 (180)
14 d1q3qa1 a.129.1.2 (A:9-145,A:4 99.8 3.8E-20 2.7E-24 175.3 12.7 141 275-415 113-257 (258)
15 d1kp8a1 a.129.1.1 (A:2-136,A:4 99.7 1.3E-16 9.8E-21 150.1 12.3 236 165-417 1-252 (252)
16 d1sjpa3 d.56.1.1 (A:135-188,A: 99.4 1.9E-14 1.4E-18 112.0 1.5 86 28-114 2-88 (89)
17 d1we3a3 d.56.1.1 (A:139-189,A: 99.1 1.5E-11 1.1E-15 94.3 3.9 76 30-109 2-77 (86)
18 d1kp8a3 d.56.1.1 (A:137-190,A: 99.0 6.1E-11 4.4E-15 93.7 4.1 73 27-99 1-73 (97)
19 d1ioka3 d.56.1.1 (A:137-190,A: 98.9 8.5E-11 6.2E-15 92.6 0.9 75 27-101 1-75 (97)
20 d1q3qa3 d.56.1.2 (A:146-216,A: 98.8 5.8E-10 4.2E-14 90.1 2.6 79 28-117 3-98 (107)
21 d1a6da3 d.56.1.2 (A:146-214,A: 98.7 1.5E-09 1.1E-13 87.3 2.6 77 30-117 2-95 (105)
22 d1a6db3 d.56.1.2 (B:145-215,B: 98.7 5.2E-10 3.8E-14 90.4 -0.5 81 29-118 3-105 (107)
23 d1kp8a1 a.129.1.1 (A:2-136,A:4 98.1 2.1E-08 1.6E-12 93.1 -7.4 119 1-119 110-249 (252)
24 d1ioka3 d.56.1.1 (A:137-190,A: 97.0 0.00047 3.4E-08 53.2 5.9 44 256-299 54-97 (97)
25 d1q3qa1 a.129.1.2 (A:9-145,A:4 97.0 7.5E-06 5.4E-10 75.7 -5.7 117 1-117 111-254 (258)
26 d1we3a1 a.129.1.1 (A:3-138,A:4 97.0 1E-05 7.6E-10 74.4 -4.8 118 1-118 109-252 (255)
27 d1ioka1 a.129.1.1 (A:2-136,A:4 96.9 8.3E-05 6E-09 68.1 0.2 96 1-96 110-227 (252)
28 d1kp8a3 d.56.1.1 (A:137-190,A: 96.1 0.0036 2.6E-07 48.2 5.1 43 257-299 55-97 (97)
29 d1a6db1 a.129.1.2 (B:20-144,B: 90.3 0.18 1.3E-05 44.7 6.0 59 1-59 98-167 (243)
30 d1a6da1 a.129.1.2 (A:17-145,A: 88.1 0.33 2.4E-05 43.0 6.0 89 1-90 102-209 (245)
31 d1sjpa1 a.129.1.1 (A:62-134,A: 84.5 0.15 1.1E-05 43.2 1.4 30 1-30 48-77 (180)
32 d1l0ba2 c.15.1.3 (A:1705-1801) 73.0 2.9 0.00021 30.9 5.3 48 161-216 5-52 (97)
33 d1g6ha_ c.37.1.12 (A:) MJ1267 38.0 9 0.00065 33.3 3.1 43 105-147 166-213 (254)
34 d1ji0a_ c.37.1.12 (A:) Branche 37.8 11 0.00081 32.4 3.7 43 105-147 155-202 (240)
35 d1vpla_ c.37.1.12 (A:) Putativ 35.5 9.6 0.0007 32.8 2.9 43 105-147 149-196 (238)
36 d1gqoa_ c.23.13.1 (A:) Type II 31.2 80 0.0058 24.4 7.6 82 108-192 1-97 (141)
37 d2f6ma1 a.2.17.1 (A:322-385) V 31.1 37 0.0027 22.7 4.7 22 282-303 13-34 (64)
38 d1cf7b_ a.4.5.17 (B:) Cell cyc 28.3 17 0.0012 25.8 2.6 22 275-296 45-66 (82)
39 d1l7vc_ c.37.1.12 (C:) ABC tra 27.8 15 0.0011 31.2 2.8 40 107-146 150-194 (231)
40 d1b0ua_ c.37.1.12 (A:) ATP-bin 26.9 21 0.0015 30.9 3.6 43 105-147 165-212 (258)
41 d1sjpa3 d.56.1.1 (A:135-188,A: 26.8 44 0.0032 23.8 4.9 34 267-300 56-89 (89)
42 d2etva1 c.92.2.4 (A:25-358) Pu 21.9 82 0.0059 27.3 6.9 59 127-189 77-139 (334)
43 d3d31a2 c.37.1.12 (A:1-229) Su 21.5 27 0.002 29.6 3.2 43 105-147 143-191 (229)
44 d1d7ya2 c.3.1.5 (A:116-236) NA 21.4 25 0.0018 26.3 2.7 37 284-321 15-54 (121)
45 d1w3ex1 d.79.3.1 (X:1-98) Euka 21.1 1.1E+02 0.0078 21.7 6.2 54 125-188 22-76 (98)
46 d1n2za_ c.92.2.2 (A:) Vitamin 20.7 43 0.0031 27.8 4.4 56 127-187 50-106 (245)
47 d1vm6a3 c.2.1.3 (A:1-96,A:183- 20.3 56 0.0041 24.6 4.6 48 105-155 39-86 (128)
48 d1g2912 c.37.1.12 (1:1-240) Ma 20.2 26 0.0019 30.0 2.7 43 105-147 155-203 (240)
No 1
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.9e-40 Score=301.13 Aligned_cols=189 Identities=57% Similarity=0.921 Sum_probs=184.9
Q ss_pred eeEeceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHccc
Q 013743 78 EVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKL 157 (437)
Q Consensus 78 ~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i 157 (437)
++.+|+.|++||.||||+|+.+++.++++||+||++|.+|+++++++|+||.+.+.+.||||++++|+++||+.|+.|+.
T Consensus 5 ~~tEG~~~d~Gy~SpyFvtd~~~~~~~l~~p~ILitd~kI~~~~~i~p~Le~~~~~~~pLlIIA~di~~~aL~~Lv~N~~ 84 (193)
T d1kida_ 5 RGSEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTM 84 (193)
T ss_dssp SCCCCEEESCCCSCGGGCCBTTTTBEEEESCEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHH
T ss_pred cccCCeeecCCcCCccceeCCCCCEEEecCcEEEEEcCCcccHHHHHHHHHHHHhhCCcEEEEeccccHHHHHHHHHhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHH
Q 013743 158 RAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCE 237 (437)
Q Consensus 158 ~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~ 237 (437)
+|.++|||||+|+||+.+++.|+|||.+|||++++.+.+.++++++.++||+|++|.+++++|+++.+.++++.+++|++
T Consensus 85 kg~l~v~aVkaPgfG~~r~~~LeDlA~~TGa~vi~~~~g~~l~~~~~~~LG~~~kv~itk~~T~ii~g~g~~~~I~~Ri~ 164 (193)
T d1kida_ 85 RGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVA 164 (193)
T ss_dssp TTSCCEEEEECCSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHH
T ss_pred ccCcceeeccCCCcChhHHHHHHHHHHHcCCEEechhcccccccCCHhHcCcccEEEEecCceEEEcCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHhhcCCe
Q 013743 238 QIRSAIENSTSDYDKEKLQERLAKLSGGV 266 (437)
Q Consensus 238 ~l~~~l~~~~~~~~~~~l~~rl~rl~g~~ 266 (437)
+|+.+++++.++|++++|++||+||+|++
T Consensus 165 ~Lk~~l~~~~~~~~~e~L~eRlakLsGGV 193 (193)
T d1kida_ 165 QIRQQIEEATSDYDREKLQERVAKLAGGV 193 (193)
T ss_dssp HHHHHHHHCCSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999874
No 2
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=100.00 E-value=3.4e-39 Score=291.23 Aligned_cols=184 Identities=54% Similarity=0.917 Sum_probs=180.8
Q ss_pred ceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCc
Q 013743 82 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGI 161 (437)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~ 161 (437)
|+.|++||.||||+|+.+++.++++||+||++|.+|+++++++|+|+.+.+.++||||++++|+++||+.|+.|+++|.+
T Consensus 1 G~~~d~Gy~Sp~Fvt~~~~~~~~~~~p~ili~d~ki~~~~~i~p~Le~~~~~~rPLlIIA~di~~~aL~~Lv~N~~~g~l 80 (184)
T d1sjpa2 1 GMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTF 80 (184)
T ss_dssp EEEESCCBSCGGGCSBTTTTBEEEESCEEEEESSCBCCSTTTHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHTTSS
T ss_pred CCccCcCccCcccccCCCCCEEEecCCEEEEecCccCcHHHHHHHHHHhhccCCcEEEEcchhhHHHHHHHHHHHhcCch
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHHH
Q 013743 162 KVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRS 241 (437)
Q Consensus 162 ~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~~ 241 (437)
+|||||+|+||..+++.|+|||.+|||++++.+.+..+++++.++||+|++|++++++++++++.++++.++.|+++|++
T Consensus 81 ~v~aVkaPgfG~~r~~~L~DlA~~TGa~vi~~~~g~~l~~~~~~~LG~~~kv~itk~~T~ii~~~g~~~~I~~Ri~~Lk~ 160 (184)
T d1sjpa2 81 KSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQ 160 (184)
T ss_dssp CCEEEECSSCHHHHHHHHHHHHHHHTCCEEBTTTTBCSSSCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHH
T ss_pred heecccCCCCCcchHHHHHHHHHHhCCEEecccccccccccchhhCCeeeEEEEecCceEEecCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCChHHHHHHHHHHHhhcCC
Q 013743 242 AIENSTSDYDKEKLQERLAKLSGG 265 (437)
Q Consensus 242 ~l~~~~~~~~~~~l~~rl~rl~g~ 265 (437)
+++.+.+++++++|++||+||+|+
T Consensus 161 ~l~~~~~~~e~~~L~eRLAkLsGG 184 (184)
T d1sjpa2 161 EIENSDSDYDREKLQERLAKLAGG 184 (184)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999985
No 3
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]}
Probab=100.00 E-value=6.1e-37 Score=274.05 Aligned_cols=176 Identities=63% Similarity=1.009 Sum_probs=130.2
Q ss_pred eceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccC
Q 013743 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (437)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~ 160 (437)
+|+.|++||.||||+|+.+++.++++||+||++|.+|+++++++|+|+++.+.++||||++++|+++||++|+.|+++|.
T Consensus 1 EG~~~d~Gy~SpyFvtd~~~~~~~l~np~ILi~d~kI~~~~~i~p~Le~~~~~~~PLlIIA~di~~~aL~~Lv~N~~~g~ 80 (176)
T d1ioka2 1 EGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGG 80 (176)
T ss_dssp CCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC---------------
T ss_pred CCcccccCccCccceeCCcCCEEEeeCcEEEEEccccCcHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHHhcCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHH
Q 013743 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (437)
Q Consensus 161 ~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~ 240 (437)
++|||||+|+||..+++.|+|||.+|||++++.+.+..+++++.++||+|++|.+++++|+++++.++++.+++|+++|+
T Consensus 81 l~v~aVkaP~fG~~r~~~LeDlA~~tGa~vi~~~~g~~l~~~~~~~LG~a~kv~vtk~~T~ii~g~g~~~~i~~Ri~~Lk 160 (176)
T d1ioka2 81 LKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIR 160 (176)
T ss_dssp --CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCcHHHHHHHHHHHhhCCEEEecccCCChhhCCHHHCceeeEEEEecCceEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHHH
Q 013743 241 SAIENSTSDYDKEKLQ 256 (437)
Q Consensus 241 ~~l~~~~~~~~~~~l~ 256 (437)
++++++.++|+|++|+
T Consensus 161 ~~i~~~~s~~~rekLq 176 (176)
T d1ioka2 161 QQIEETTSDYDREKLQ 176 (176)
T ss_dssp HHHTTCCCSSHHHHHH
T ss_pred HHHHHcCCHHHHHhhC
Confidence 9999999999999875
No 4
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]}
Probab=99.97 E-value=6.6e-32 Score=233.24 Aligned_cols=144 Identities=52% Similarity=0.898 Sum_probs=141.5
Q ss_pred ceEEeecccCcccccccccCceeecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCc
Q 013743 82 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGI 161 (437)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~ 161 (437)
|+.|++||.||||+++.++|..+++||+||++|.+|+++++++|+||.+.+.++||||++++|+++||+.|+.|+++|.+
T Consensus 1 G~~~d~Gy~Sp~Fvtd~~~~~~~l~~p~ILi~d~kI~~~~~ilp~Le~~~~~~rPLlIIA~di~~eaL~~Lv~N~~~g~l 80 (145)
T d1srva_ 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CCccccCccCCccccCcccCEEEecCceeeecccccccHHHHHHHHHHHHHhCCcEEEEeCccCHHHHHHHHHHHhcCce
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEecceEEEEcC
Q 013743 162 KVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDG 225 (437)
Q Consensus 162 ~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~ 225 (437)
+|||||+|+||+.+++.|+|||.+|||++++.+.+..+++++.++||+|++|+++++++++++|
T Consensus 81 ~v~aVkaP~fG~~r~~~L~DlAi~tGa~v~~~~~g~~l~~~~~~~LGsa~kv~vtkd~T~ii~G 144 (145)
T d1srva_ 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCccHHHHHHHhhhhhhhCCEeeccccCcccccCCHHHCCcccEEEEeCCccEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986
No 5
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.94 E-value=3.3e-27 Score=222.21 Aligned_cols=154 Identities=19% Similarity=0.285 Sum_probs=137.6
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCchh-HHHHhHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHH
Q 013743 252 KEKLQERLAKLSGGVAVLKIGGASEA-EVGEKKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKI 328 (437)
Q Consensus 252 ~~~l~~rl~rl~g~~~tI~v~G~t~~-~l~E~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~ 328 (437)
.+.|++++..+. .|-++. +.+..++.++++++.++...+.. ++||||++|+++|..|+.++.+ ++++|+
T Consensus 84 ~~ll~~~~~~i~--------~G~~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~ggGa~e~~~a~~l~~~a~~~~g~~q~ 155 (243)
T d1a6db1 84 GGLLQQAQGLIN--------QNVHPTVISEGYRMASEEAKRVIDEISTKIAYAAGGGATAAEIAFRLRSYAQKIGGRQQL 155 (243)
T ss_dssp HHHHHHHHHHHH--------TTCCHHHHHHHHHHHHHHHHHHHHHHCEECEEEETTTHHHHHHHHHHHHHHHHTCSSHHH
T ss_pred HHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCchhHHHHHHHhhhhhccCCHHHH
Confidence 355777765554 455555 44558888888888888888887 9999999999999999999988 899999
Q ss_pred HHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHh
Q 013743 329 GVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLM 405 (437)
Q Consensus 329 ~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~i 405 (437)
++++|++||+.||++|++|||+|+.+++.+|+..| +.++|+|+.+|++.||.+.|||||+.||+++|+.|+|+|++|
T Consensus 156 ~i~~~a~Ale~ip~~LaeNaG~d~~~~i~~l~~~h~~~~~~~Gvd~~~g~i~d~~~~gV~dp~~vk~~ai~~A~e~a~~i 235 (243)
T d1a6db1 156 AIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMI 235 (243)
T ss_dssp HHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCccccccCCCChhHHHHHHHHHHhCCCCceeEECcCCEEeehHhcccEecHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998776 578999999999999999999999999999999999999999
Q ss_pred hchhhhhh
Q 013743 406 TTTEAIVV 413 (437)
Q Consensus 406 L~id~iI~ 413 (437)
||||+||+
T Consensus 236 L~iD~iis 243 (243)
T d1a6db1 236 LRIDDVIA 243 (243)
T ss_dssp HHEEEEEC
T ss_pred HHHHHhcC
Confidence 99999874
No 6
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.90 E-value=3e-24 Score=202.36 Aligned_cols=141 Identities=23% Similarity=0.335 Sum_probs=127.9
Q ss_pred cCCch-hHHHHhHhhHhhHHHHHHHHHHcCccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcC
Q 013743 272 GGASE-AEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAG 349 (437)
Q Consensus 272 ~G~t~-~~l~E~~r~l~dAl~~~~~al~~gvvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG 349 (437)
.|.++ .+.+..+.++++++..++...+.+++||||+.|++++..|..++.+ .+.+|+++++|++||+.||++|++|+|
T Consensus 100 ~G~~p~~i~~g~~~a~~~a~~~L~~~a~~~~v~g~ga~e~~l~~~l~~~a~~~~g~eq~a~~~~a~Ale~ip~~laeNaG 179 (245)
T d1a6da1 100 QGVHPTVISNGYRLAVNEARKIIDEIAEKSFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAG 179 (245)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHHHCEECEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred CCCCchhhhhhHHHHHHHHHHHHHhhccceeecCchhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhhhhhhhhccCC
Confidence 34444 3445578888888888887777779999999999999999999888 789999999999999999999999999
Q ss_pred CCHHHHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhh
Q 013743 350 VEGAVVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIV 412 (437)
Q Consensus 350 ~d~~~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI 412 (437)
+|+.+++.+++..| ..++|+|+.+|.+.||.+.|||||+.+|.++|+.|+|+|++|||||+||
T Consensus 180 ~D~i~iv~~l~~~~~~~~~~~Gv~~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~iD~ii 245 (245)
T d1a6da1 180 IDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVI 245 (245)
T ss_dssp SCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC
T ss_pred CCchhhhhhhhcccccCCceeeEEccCCeEeehHhcCccccHHHHHHHHHHHHHHHHHHHhhceeC
Confidence 99999999998765 5689999999999999999999999999999999999999999999986
No 7
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=99.89 E-value=3.9e-24 Score=202.94 Aligned_cols=197 Identities=38% Similarity=0.551 Sum_probs=163.4
Q ss_pred EEEecceEEEEcCCCChhhHHHHHHHHHHHHhhcCChHH-----------HHHHHHHHHhhcCCeEEEEecCCchhHHHH
Q 013743 213 VTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYD-----------KEKLQERLAKLSGGVAVLKIGGASEAEVGE 281 (437)
Q Consensus 213 v~i~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~-----------~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E 281 (437)
..+.++..++......++..+.+++.+..++..+.+++. ++.+++.+..+ .-|.....++++
T Consensus 45 ~~itkdg~ti~~~i~l~d~~e~~~a~~~~~~~~~~~~~~gDgttt~~vl~~~~l~~~~~~i-------~~G~~~~~i~~g 117 (255)
T d1we3a1 45 PTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNV-------AAGANPLALKRG 117 (255)
T ss_dssp CEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHH-------HTTCCHHHHHHH
T ss_pred ceEecchhhhhhhccccchhhhhHHHHHHHhhhhhHHHhhcchhHHHHHHHHHHHhhhhHH-------hcCCccchhhhh
Confidence 356666666666666666777888888777766554332 23344433222 223445678899
Q ss_pred hHhhHhhHHHHHHHHHHcC-ccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHH
Q 013743 282 KKDRVTDALNATKAAVEEG-IVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKL 359 (437)
Q Consensus 282 ~~r~l~dAl~~~~~al~~g-vvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l 359 (437)
.++++++|+.+++...+.. ++||||+++++++..++.+... ++.+++|+++|++||+.||+++++|+|+++..+...+
T Consensus 118 ~~~a~~~al~~l~~~~~~~~~v~ggg~~~~~~~~~~~~~~~~~~g~~~~g~~iva~Al~~~~~~~~~nag~~~~~~~~~~ 197 (255)
T d1we3a1 118 IEKAVEAAVEKIKALAIPVGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQI 197 (255)
T ss_dssp HHHHHHHHHHHHHHTCBCCCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHhhhcceeccchhhhhhhhhhhHhhccCCChHHHHHHHHHHHHHhhhHHHHHhhcccccceeeeee
Confidence 9999999999999977776 9999999999999999988777 7999999999999999999999999999999888887
Q ss_pred HhhC-CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcCC
Q 013743 360 LEQD-NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 416 (437)
Q Consensus 360 ~~~~-~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~~ 416 (437)
...+ +.++|+|..+|++.||++.|||||+.|+.++++.|++++.+||++|++|...|
T Consensus 198 ~~~~~~~~~g~d~~~g~~~D~~e~Giidp~~V~~~a~~~A~~~a~~iL~~d~~I~~~p 255 (255)
T d1we3a1 198 LAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKP 255 (255)
T ss_dssp HHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECS
T ss_pred eecccCCceeEEeeccEEeehhhcCCcCchHhhHHHHHHHHHHhchHhhcchhhhcCC
Confidence 6654 56899999999999999999999999999999999999999999999998876
No 8
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=99.88 E-value=1.3e-22 Score=180.28 Aligned_cols=131 Identities=17% Similarity=0.296 Sum_probs=111.0
Q ss_pred cceeeEeceEEeecccCcccccccccCceeecCceEEEecccCC-------------CHHH-----------HHHHHHHH
Q 013743 75 NELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTA-----------VVRVLELA 130 (437)
Q Consensus 75 ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~-------------~~~~-----------l~~~le~i 130 (437)
|| ++++|++|++.++|+. |+..++||+|++++++|. ++++ +.+++++|
T Consensus 1 DS-~li~Gvvi~k~~~~~~-------m~~~i~~~kIlll~~~le~~~~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I 72 (168)
T d1gmla_ 1 DS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDI 72 (168)
T ss_dssp CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-EEEEEEEEecccCCcC-------CccccCCceEEEEeccccccccccccceecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56 8999999999998874 788999999999999752 3332 34577889
Q ss_pred HhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcc-
Q 013743 131 LKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGT- 209 (437)
Q Consensus 131 ~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~- 209 (437)
++.|+++|||+++||+.|+++|.+++ |+|++ ++++++|++||++|||+++++ +++++++++|+
T Consensus 73 ~~~g~~vv~~~~~I~~~a~~~L~~~g------I~~~~-----rv~~~dl~ria~~tga~iv~s-----i~~l~~~~lG~~ 136 (168)
T d1gmla_ 73 IQLKPDVVITEKGISDLAQHYLMRAN------VTAIR-----RVRKTDNNRIARACGARIVSR-----PEELREDDVGTG 136 (168)
T ss_dssp HTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----CCCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCC
T ss_pred HhcCCceEEEcCCCCHHHHHHHHHCC------Ceeec-----cCCHHHHHHHHHHHCCceeCc-----hhhcCccccccc
Confidence 99999999999999999999999998 57775 557999999999999999999 99999999998
Q ss_pred eeEEEE---ecceEEEEcCCCCh
Q 013743 210 CKKVTI---SKDDTVILDGAGDK 229 (437)
Q Consensus 210 ~~~v~i---~~~~~~~~~~~~~~ 229 (437)
|+.+++ ++++++||++|+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~ 159 (168)
T d1gmla_ 137 AGLLEIKKIGDEYFTFITDCKDP 159 (168)
T ss_dssp EEEEEEEEETTEEEEEEEEESST
T ss_pred ccEEEEEEECCeEEEEEEecCCC
Confidence 565554 45789999998875
No 9
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.85 E-value=2.3e-21 Score=169.23 Aligned_cols=125 Identities=17% Similarity=0.316 Sum_probs=110.0
Q ss_pred ceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHHHH-----------HHHHHHHHhcCCCE
Q 013743 82 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTAV-----------VRVLELALKRQRPL 137 (437)
Q Consensus 82 G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~~l-----------~~~le~i~~~~~~l 137 (437)
|++|+++++|+. ||..++||||++++++| ++++++ ...+++|++.|+++
T Consensus 1 Gvv~~k~~~~~~-------mpk~i~~~kIlll~~~Le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~nv 73 (152)
T d1a6db2 1 GIIVDKEKVHPG-------MPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 73 (152)
T ss_dssp EEEESCCCSSTT-------SCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CEEEeccCCCCC-------CCCcccCCcEEEEecccccccccccceeeecCHHHHHHHHHHHHHHHHHHHHHHhccCCce
Confidence 899999999875 78899999999999964 444443 45678899999999
Q ss_pred EEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEE--
Q 013743 138 LIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTI-- 215 (437)
Q Consensus 138 vi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i-- 215 (437)
|||+++|++.++++|.+++ |+|++ ++++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 74 v~~~k~Idd~a~~~l~k~g------I~~v~-----~v~~~dl~rla~~tGa~iv~s-----~~~l~~~~LG~~~~v~~~~ 137 (152)
T d1a6db2 74 VITQKGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 137 (152)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEecCCCcHHHHHHHHHcC------cchhc-----cCCHHHHHHHHHHhCCeeecc-----hhhCCcccCcCceEEEEEE
Confidence 9999999999999999998 56775 557999999999999999999 99999999999999995
Q ss_pred -ecceEEEEcCCCCh
Q 013743 216 -SKDDTVILDGAGDK 229 (437)
Q Consensus 216 -~~~~~~~~~~~~~~ 229 (437)
++++++||+||++|
T Consensus 138 ~g~~~~~~~~gc~np 152 (152)
T d1a6db2 138 VGEDYMTFVTGCKNP 152 (152)
T ss_dssp ETTEEEEEEEEESSS
T ss_pred ECCEEEEEEeCCCCC
Confidence 47899999999875
No 10
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.85 E-value=3.1e-21 Score=168.68 Aligned_cols=126 Identities=16% Similarity=0.326 Sum_probs=111.1
Q ss_pred eceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHHHH-----------HHHHHHHHhcCCC
Q 013743 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTAV-----------VRVLELALKRQRP 136 (437)
Q Consensus 81 ~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~~l-----------~~~le~i~~~~~~ 136 (437)
.|++|++.++|+. ||..++||+|++++++| ++++++ ...+++|++.|+|
T Consensus 1 kGvv~~k~~~~~~-------mp~~i~n~kIlll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~n 73 (153)
T d1q3qa2 1 RGVVIDKEVVHPR-------MPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGAN 73 (153)
T ss_dssp SSEEESCCCSSTT-------SCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CeEEEeCCCCCcc-------CCcccCCccEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 4999999998874 78899999999999975 455554 4567789999999
Q ss_pred EEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEE-
Q 013743 137 LLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTI- 215 (437)
Q Consensus 137 lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i- 215 (437)
+|+++++|++.++++|.+++ |+|++ ++++++|++||++|||+++++ ++++++++||+|+.|++
T Consensus 74 vvl~~k~I~~~a~~~l~~~g------I~~v~-----~v~~~dl~ria~~tGa~iv~s-----i~~l~~~~LG~~~~~~~~ 137 (153)
T d1q3qa2 74 VVFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEER 137 (153)
T ss_dssp EEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEE
T ss_pred ceeecCCCcHHHHHHHHHcC------Cceec-----cCCHHHHHHHHHhhCCEEecc-----hhhCCcccCeeeEEEEEE
Confidence 99999999999999999998 57775 557999999999999999999 99999999999999985
Q ss_pred --ecceEEEEcCCCCh
Q 013743 216 --SKDDTVILDGAGDK 229 (437)
Q Consensus 216 --~~~~~~~~~~~~~~ 229 (437)
++++++||+||++|
T Consensus 138 ~~g~~~~~~~~gc~~P 153 (153)
T d1q3qa2 138 KLAGENMIFVEGCKNP 153 (153)
T ss_dssp EETTEEEEEEECCSSC
T ss_pred EECCeeEEEEeCCCCC
Confidence 46899999999875
No 11
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.84 E-value=4.1e-21 Score=167.69 Aligned_cols=125 Identities=18% Similarity=0.331 Sum_probs=109.8
Q ss_pred EeceEEeecccCcccccccccCceeecCceEEEecccC-------------CCHHHH-----------HHHHHHHHhcCC
Q 013743 80 VEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLTAV-----------VRVLELALKRQR 135 (437)
Q Consensus 80 ~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i-------------~~~~~l-----------~~~le~i~~~~~ 135 (437)
++|+++++.++|+. ||..++||+|++++++| ++++++ ..++++|+.+|+
T Consensus 1 i~Gvv~~k~~~~~~-------mp~~i~~~kI~ll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~ 73 (152)
T d1assa_ 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (152)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEeCccCCCC-------CCccccCceEEEEecccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 47999999999864 78899999999999975 344443 456788999999
Q ss_pred CEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEE
Q 013743 136 PLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTI 215 (437)
Q Consensus 136 ~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i 215 (437)
++|+|+++|++.++++|.+++ |.+++ ++++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 74 nvvl~~~~I~~~a~~~l~k~g------I~~v~-----~v~~~dl~ria~atGa~iv~s-----~~~l~~~~LG~~~~v~~ 137 (152)
T d1assa_ 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (152)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred ceEEEeccccHHHHHHHHHcC------Ccccc-----CCCHHHHHHHHHHhCCceeCC-----cccCCcccCeeeeEEEE
Confidence 999999999999999999998 46775 567999999999999999999 99999999999999995
Q ss_pred ---ecceEEEEcCCC
Q 013743 216 ---SKDDTVILDGAG 227 (437)
Q Consensus 216 ---~~~~~~~~~~~~ 227 (437)
++++++||+||+
T Consensus 138 ~~ig~~~~~~~~GCk 152 (152)
T d1assa_ 138 RKIGDDRMTFVMGCK 152 (152)
T ss_dssp EEETTEEEEEEESCC
T ss_pred EEECCEEEEEEecCC
Confidence 578999999985
No 12
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.83 E-value=2.5e-21 Score=182.95 Aligned_cols=239 Identities=37% Similarity=0.525 Sum_probs=186.7
Q ss_pred EEecCCCC-cchhhhHHHHHHHhCCeEeccCcCCccccCC-cCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHHHH
Q 013743 165 AIKAPGFG-ENRKANMQDLAVLTGGDLITEELGMDLEKVN-LDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSA 242 (437)
Q Consensus 165 aV~~~~~~-~~~~~~le~la~~tG~~ii~~~~~~~~~~~~-~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~~~ 242 (437)
|+|.+.|| +.++..|+++..++++ +..++|..-.+.- ....|. ..+.++.+++..+...++.++.+++.+..+
T Consensus 1 a~k~~~fg~~ar~~~l~gi~~l~~~--v~~tlGp~G~~v~i~~~~g~---~~ITkDg~TI~~~i~~~~~~e~~~a~l~~~ 75 (252)
T d1ioka1 1 AAKEVKFNSDARDRMLKGVNILADA--VKVTLGPKGRNVVIDKSFGA---PRITKDGVSVAKEIELSDKFENMGAQMVRE 75 (252)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHH--HGGGCSTTCCEEEECCSSSS---CEEECCHHHHHHHCCCSSHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHh--HHhccCCCcCeEEEEcCCCC---ceEEcCCceeeeccccCChHHHHHHHHHHH
Confidence 35667888 4478899999998865 3343443322221 233443 456777788888777788888899988888
Q ss_pred HhhcCChHH-----------HHHHHHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcCccccchHHHHH
Q 013743 243 IENSTSDYD-----------KEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLY 311 (437)
Q Consensus 243 l~~~~~~~~-----------~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~gvvpGGG~~e~~ 311 (437)
+..+.+++. .+.+++.+..+. .|.++.++.+-.+...+++.....++..|++||||.+.++
T Consensus 76 ~a~~~~~~~gDgttt~~vla~~ll~~g~~~l~--------~G~~p~~i~~g~~~a~~~v~~~l~~~a~~i~~~g~~al~~ 147 (252)
T d1ioka1 76 VASRTNDEAGDGTTTATVLAQAIVREGLKAVA--------AGMNPMDLKRGIDVATAKVVEAIKSAARGIVVGGGVALVQ 147 (252)
T ss_dssp HHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHH--------TTCCHHHHHHHHHHHHHHHHHHHHTTCBCEEETTTHHHHH
T ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHHHHHH--------cCCCcchhhhhHHHHHHHHHHHHHHhcCCCCCchHHhhHH
Confidence 776544321 233444443333 4778877777777777776666666777899999999999
Q ss_pred HHHHHHhhcccchhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhCCCceeEeCCCCccccccccCccccchhH
Q 013743 312 AAKELEKLSTANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVI 391 (437)
Q Consensus 312 ls~~L~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk 391 (437)
++..|......++.+++|+.++.+|++.|.+++++|+|.|+..++.+.....+..+|||..+++++||++.||+||+.|+
T Consensus 148 ~~~~l~~~~~~~~d~~~G~~iv~~Al~~p~~~i~~naG~dg~~vv~~~~~~~~~~~g~~~~~~~~g~~~~~GiidP~kVt 227 (252)
T d1ioka1 148 GAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVV 227 (252)
T ss_dssp HGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHH
T ss_pred HHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCcceEEEeecccCcCCEEEEceeeeEeeeecccccCcHHHH
Confidence 99888665444678899999999999999999999999999999999887777899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhchhhhhhcCC
Q 013743 392 RTALVDAASVSSLMTTTEAIVVELP 416 (437)
Q Consensus 392 ~~aL~~A~e~a~~iL~id~iI~~~~ 416 (437)
+.+|+.|+++|.+||++|.+|...|
T Consensus 228 ~~al~~A~sva~~lltte~~i~~~p 252 (252)
T d1ioka1 228 RTALEDAASVAGLLITTEAMIAEKP 252 (252)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEECC
T ss_pred HHHHHHHHhhhhHHHhhceeeecCC
Confidence 9999999999999999999998765
No 13
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=99.81 E-value=1.4e-20 Score=168.70 Aligned_cols=133 Identities=38% Similarity=0.586 Sum_probs=117.7
Q ss_pred cCCchhHHHHhHhhHhhHHHHHHHHHHcC--ccccchHHHHHHHHHHHhhcccchhHHHHHHHHHHHhhHHHHHHHHHcC
Q 013743 272 GGASEAEVGEKKDRVTDALNATKAAVEEG--IVPGGGVALLYAAKELEKLSTANFDQKIGVQIIQNALKTPVHTIAANAG 349 (437)
Q Consensus 272 ~G~t~~~l~E~~r~l~dAl~~~~~al~~g--vvpGGG~~e~~ls~~L~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG 349 (437)
.|.++. +.++.+++|+..+...++.. .+||||..++++...+.... .++.++.++++|++||+.|+++|++|||
T Consensus 46 ~g~~p~---~i~~Gi~~A~~~v~~~L~~~a~~v~g~~~~~l~a~~al~~~~-~~~~e~~g~~i~~~Al~~p~~~I~~NaG 121 (180)
T d1sjpa1 46 AGANPL---GLKRGIEKAVEKVTETLLKGAKIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSG 121 (180)
T ss_dssp TTCCHH---HHHHHHHHHHHHHHHHHHHTCBEEETTTTTTTTTGGGGGGSC-CCTHHHHHHHHHHHHTTHHHHHHHHTTT
T ss_pred CCCChH---HHHhhHHHHHHHHHHHHHHHHhhhcchhhhHHHHHHHHhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 455543 77899999999999888887 89999999998776665432 2578999999999999999999999999
Q ss_pred CCHHHHHHHHHhhCCCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchh
Q 013743 350 VEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTE 409 (437)
Q Consensus 350 ~d~~~v~~~l~~~~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id 409 (437)
+|+..++.+++.. .+++|||..+|+++||++.||+||+.|+++||+.|+++|++||+++
T Consensus 122 ~~~~~v~~~~~~~-~~~~G~d~~~~~~~dm~e~GIiDP~kV~~~AL~~A~s~a~~~ltte 180 (180)
T d1sjpa1 122 LEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTE 180 (180)
T ss_dssp SCHHHHHHHHHTS-CTTEECCTTTCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCchhhhhhhhcc-ccccCccccccccccHHHcCCcCcHHHHHHHHHhHHHHHHHHHhCC
Confidence 9999999998765 5799999999999999999999999999999999999999999975
No 14
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.81 E-value=3.8e-20 Score=175.32 Aligned_cols=141 Identities=20% Similarity=0.338 Sum_probs=129.6
Q ss_pred chhHHHHhHhhHhhHHHHHHHHHHcCccccchHHHHHHHHHHHhhccc-chhHHHHHHHHHHHhhHHHHHHHHHcCCCHH
Q 013743 275 SEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLSTA-NFDQKIGVQIIQNALKTPVHTIAANAGVEGA 353 (437)
Q Consensus 275 t~~~l~E~~r~l~dAl~~~~~al~~gvvpGGG~~e~~ls~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~ 353 (437)
...+.+..+.++++++..++......++||||+.|+..+..+..++.. .+.+++++++|++||+.||++|++|+|+|+.
T Consensus 113 p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~g~~ei~~a~~l~~~a~~~~~~~~~a~~~~a~Al~~Ip~~la~N~G~d~i 192 (258)
T d1q3qa1 113 PSIITKGYALAAEKAQEILDEIAIRAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTV 192 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCEEEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCchHHHHHHHHHHhhhcccchHHHHHHHHHHHhccchhhhhhhhcCCccc
Confidence 345557888888888888888877779999999999999999998877 7899999999999999999999999999999
Q ss_pred HHHHHHHhhC---CCceeEeCCCCccccccccCccccchhHHHHHHHHHHHHHHhhchhhhhhcC
Q 013743 354 VVVGKLLEQD---NTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVEL 415 (437)
Q Consensus 354 ~v~~~l~~~~---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~aL~~A~e~a~~iL~id~iI~~~ 415 (437)
+++.+++..| +.++|+|+.+|.+.||.+.|+|||+.||.++++.|++++.+||+||++|+.+
T Consensus 193 ~~v~~l~~~~~~~~~~~gvdv~~G~~~D~~~~Gii~p~~vk~~~l~~A~e~a~~IL~iD~iI~ak 257 (258)
T d1q3qa1 193 EMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 257 (258)
T ss_dssp HHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred eehhhhhhhcccCCCceEEEEECCEEeEchHcCccccHHHHHHHHHHHHHHhCcceeEccEEeeC
Confidence 9999998655 6789999999999999999999999999999999999999999999999875
No 15
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=99.67 E-value=1.3e-16 Score=150.07 Aligned_cols=236 Identities=31% Similarity=0.476 Sum_probs=171.1
Q ss_pred EEecCCCC-cchhhhHHHHHHHhCCeEeccCcCCccccC-CcCCCcceeEEEEecceEEEEcCCCChhhHHHHHHHHHHH
Q 013743 165 AIKAPGFG-ENRKANMQDLAVLTGGDLITEELGMDLEKV-NLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSA 242 (437)
Q Consensus 165 aV~~~~~~-~~~~~~le~la~~tG~~ii~~~~~~~~~~~-~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~~~~~l~~~ 242 (437)
|.|.|.|| +.++..|++++.++++ +...+|..-.+. -.+..| ...+.++.+++.......+.++.+++.+-.+
T Consensus 1 ~ak~~~fg~dar~~ll~gi~~la~~--v~~TLGP~g~~~~i~~~~g---~~~iTkDg~ti~~~i~~~d~~e~~~a~~~~~ 75 (252)
T d1kp8a1 1 AAKDVKFGNDAGVKMLRGVNVLADA--VKVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDKFENMGAQMVKE 75 (252)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHH--HHTTCSTTCCEEEECCSSS---SCEEECCHHHHHHHCCCSSHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHHHHHHHhh--HHhccCCCCCeEEEEcCCC---CeEEEecchheeecccccchHHHHHHHHHHH
Confidence 34677899 6688899999999865 444344332221 112334 2445666666665555556666666666555
Q ss_pred HhhcCChH-----------HHHHHHHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHH---cCccccchHH
Q 013743 243 IENSTSDY-----------DKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVE---EGIVPGGGVA 308 (437)
Q Consensus 243 l~~~~~~~-----------~~~~l~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~---~gvvpGGG~~ 308 (437)
+.....++ -++.+++-+..+ -.|.++.. .++.++.|...+...++ .++.+|++..
T Consensus 76 ~a~~~~~~~GDgttt~~vla~~ll~~~~~~i--------~~G~~p~~---i~~gi~~a~~~v~~~L~~~s~~i~~~~~~~ 144 (252)
T d1kp8a1 76 VASKANDAAGDGTTTATVLAQAIITEGLKAV--------AAGMNPMD---LKRGIDKAVTVAVEELKALSVGVVAGGGVA 144 (252)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHH--------HTTCCHHH---HHHHHHHHHHHHHHHHHHHCBCEEETTTHH
T ss_pred HHHhhhHHhccccchhHHHHHHHHHHHHHHH--------HcCCcchh---hhhhhhhHHHHHHHHHHhcceeeccCchhh
Confidence 54432222 133444444333 34556544 44455555555555554 4799999999
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHhhHHHHHHHHHcCCCHHHHHHHHHhhCCCceeEeCCCCccccccccCccccc
Q 013743 309 LLYAAKELEKLSTANFDQKIGVQIIQNALKTPVHTIAANAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPL 388 (437)
Q Consensus 309 e~~ls~~L~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~v~~~l~~~~~~~~Gid~~~g~i~d~~~~gI~Dp~ 388 (437)
..+++..+......++.+++|..++.+||+.|.++++.|+|.++..++.++.. ..+++|||..++.++|+++.|++||+
T Consensus 145 ~v~~~~~~~~~k~~n~d~~iG~~Iv~~Al~~p~~~i~~nag~~g~~~~~~v~~-~~~~~g~~~~~~~~g~~~~~G~idP~ 223 (252)
T d1kp8a1 145 LIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKG-GDGNYGYNAATEEYGNMIDMGILDPT 223 (252)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHH-SCTTEEEETTTTEEEETTTTTCEEEH
T ss_pred hhHHHHHhhhhcccCccHHHhHHHHHHHHHHHHHHHHHhhhhcccccceeeee-cCCCeeEEEEEEEEEEEEeeccCCcc
Confidence 99998877655444678999999999999999999999999999999998865 46889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhchhhhhhcCCc
Q 013743 389 KVIRTALVDAASVSSLMTTTEAIVVELPK 417 (437)
Q Consensus 389 ~vk~~aL~~A~e~a~~iL~id~iI~~~~~ 417 (437)
.|...+++.|..++.+||++|..|...|+
T Consensus 224 ~Vt~~al~~a~~~~~~iL~te~~i~~~pe 252 (252)
T d1kp8a1 224 KVTRSALQYAASVAGLMITTECMVTDLPK 252 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHTEEEEEEECCC
T ss_pred eeccHhhhhheeccceeEeecccccCCCC
Confidence 99999999999999999999999988764
No 16
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=99.40 E-value=1.9e-14 Score=111.99 Aligned_cols=86 Identities=35% Similarity=0.516 Sum_probs=78.3
Q ss_pred CCCHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeEeceEEeecccCccccccc-ccCceeec
Q 013743 28 ISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQ-KNQKCELE 106 (437)
Q Consensus 28 v~~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~-~~~~~~l~ 106 (437)
+++.+.+.+||.+|. +|+.+++++++|+.++|.+|.|.+..|.+.++++++++|+.|++||.||||+++. .++...|+
T Consensus 2 V~~~e~i~~VAtISa-~D~~iG~lIa~A~~kVG~dGvItvEe~~~~~t~le~veG~~~d~Gy~Sp~fvtd~k~r~e~~l~ 80 (89)
T d1sjpa3 2 VETKEQIAATAAISA-GDQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEVAVIKAGAATEVELKERKHRIEDAVR 80 (89)
T ss_dssp CCSHHHHHHHHHHHT-TCHHHHHHHHHHHHHSCTTSCEEEEEESSSSEEEEEESEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHhhheec-CCHHHHHHHHHHHHhcCCCCceEEEeccccceEEEEEEEEEecCCccCceEEcccHHhhHHHHh
Confidence 457788999999988 5888999999999999999999999999999999999999999999999999865 45667899
Q ss_pred CceEEEec
Q 013743 107 DPLILVHE 114 (437)
Q Consensus 107 ~p~Ill~d 114 (437)
+|+||++|
T Consensus 81 ~p~ili~d 88 (89)
T d1sjpa3 81 NAKAAVEE 88 (89)
T ss_dssp HHHHHHHH
T ss_pred CceEeeec
Confidence 99999876
No 17
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]}
Probab=99.11 E-value=1.5e-11 Score=94.27 Aligned_cols=76 Identities=45% Similarity=0.599 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCce
Q 013743 30 TSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPL 109 (437)
Q Consensus 30 ~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~ 109 (437)
|.+.|.+||.+|.| |+.+++|+++|+.++|.+|.|.+..|.+.++++++++|+.+++ +|||+++.++|.++++||.
T Consensus 2 d~~~i~~VAtISAn-D~~iG~lIAeA~~kVG~dGvItVEes~t~~t~levveG~~~~~---s~~fvtd~~~~~~elenpL 77 (86)
T d1we3a3 2 DRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVGVAVIRV---GAATETELKEKKHRFEDAL 77 (86)
T ss_dssp SHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECEEEEEE---CCSSHHHHHHHHHHHHHHH
T ss_pred CHHHHhhheeeecC-CHHHHHHHHHHHHHcCCCceEEEEecCCCCeEEEEEEeeeccc---ceeeeeehhhcEEEEeCcH
Confidence 67889999999886 8889999999999999999999999999999999999998865 5688899999999999984
No 18
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]}
Probab=99.03 E-value=6.1e-11 Score=93.75 Aligned_cols=73 Identities=49% Similarity=0.653 Sum_probs=69.2
Q ss_pred cCCCHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeEeceEEeecccCcccccccc
Q 013743 27 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQK 99 (437)
Q Consensus 27 ~v~~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~ 99 (437)
|+++.+.+.+||.+|.|+|+.+++++++|+.++|.+|.|.+..|.+..+++++++|+.|++||++|+|+++..
T Consensus 1 Pv~~~~~i~~VAtISan~D~~iG~lIa~a~~~vg~dGvitvee~~~~~~~~~ivEG~~~d~G~vS~~fvt~~t 73 (97)
T d1kp8a3 1 PCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVERVAKLAGGVAVIKVGAAT 73 (97)
T ss_dssp CCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEEHHHHHHHHCEEEEECCCSS
T ss_pred CCCCHHHHhhheeEecCCcHHHHHHHHHHHHHhcccceEEEeccccchhHHHHHHHHHhhcCCccceeecCcc
Confidence 6788999999999999999999999999999999999999999999999999999999999999999987553
No 19
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.91 E-value=8.5e-11 Score=92.59 Aligned_cols=75 Identities=44% Similarity=0.582 Sum_probs=69.2
Q ss_pred cCCCHHHHHHHHHHhcCCchhHHHHHHHHHHHhccCCcEEEEeCCCcccceeeEeceEEeecccCcccccccccC
Q 013743 27 MISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQ 101 (437)
Q Consensus 27 ~v~~~~~L~~va~ts~~~~~~ls~lv~~A~~~v~~~g~I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~ 101 (437)
|+++.+.+.+||.+|.|+++.+++++++|+.++|.+|.|.+..|.++++++++++|+.|++||.+|+|+++.+.+
T Consensus 1 Pv~~~~~i~~VAtISan~d~~IG~lIa~a~~~Vg~~GvitvEe~~~~~t~~~ivEG~~~~~GyiS~~fv~~~t~~ 75 (97)
T d1ioka3 1 PVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVERVAKLAGGVAVIRVGGMTEI 75 (97)
T ss_dssp CCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEEHHHHTTSSCEEEEEECCSSHH
T ss_pred CCCCHHHhheeeeeecCCchHHHHHHHHHHHHhCCCceEEeccccchhhhhhHhhhhhhhhccccccccCCCcee
Confidence 677777899999999999999999999999999999999999999999999999999999999999998765443
No 20
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=98.81 E-value=5.8e-10 Score=90.12 Aligned_cols=79 Identities=13% Similarity=0.228 Sum_probs=66.9
Q ss_pred CCCHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC--C---------cEEEEeCCCcccceeeEeceEEeeccc
Q 013743 28 ISTSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--G---------VITIHDGKTLYNELEVVEGMKLDRGYI 90 (437)
Q Consensus 28 v~~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~--g---------~I~~~~g~~~~ds~~~~~G~~~~~~~~ 90 (437)
.+|.+.|.++|+||+.+ .+.|++|+++|+..+.+. | .|.+.+|++++|| ++++|++|++.
T Consensus 3 ~~D~e~L~~va~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~~~~~~~d~~~Iki~K~~Ggsv~dS-~lv~G~vl~k~-- 79 (107)
T d1q3qa3 3 PDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVKAVTILIR-- 79 (107)
T ss_dssp TTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEEEEE--
T ss_pred ccHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhcccCCCcccchHHEEEEEecCCChhhC-EEEccEEEEcc--
Confidence 34788999999999987 379999999999998652 1 3778999999999 99999999873
Q ss_pred CcccccccccCceeecCceEEEecccC
Q 013743 91 SPYFITNQKNQKCELEDPLILVHEKKI 117 (437)
Q Consensus 91 ~~~~~~~~~~~~~~l~~p~Ill~d~~i 117 (437)
+ .||..++||+|+++||++
T Consensus 80 -~-------~mp~~i~n~ki~lld~~l 98 (107)
T d1q3qa3 80 -G-------GTEHVIDEVERALEDAVK 98 (107)
T ss_dssp -E-------SSHHHHHHHHHHHHHHHH
T ss_pred -C-------CCCcccCCcCEeeccCcH
Confidence 3 367889999999999964
No 21
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=98.74 E-value=1.5e-09 Score=87.32 Aligned_cols=77 Identities=9% Similarity=0.214 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHhcCC------chhHHHHHHHHHHHhccC--C---------cEEEEeCCCcccceeeEeceEEeecccCc
Q 013743 30 TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--G---------VITIHDGKTLYNELEVVEGMKLDRGYISP 92 (437)
Q Consensus 30 ~~~~L~~va~ts~~~------~~~ls~lv~~A~~~v~~~--g---------~I~~~~g~~~~ds~~~~~G~~~~~~~~~~ 92 (437)
|.+.|.++|+||+++ .+.|++|+++|+..+.+. | .|.+.+|+++.|| ++++|+++++ ||
T Consensus 2 D~e~L~~va~Tsl~~K~~~~~~d~ls~l~vdAv~~v~~~~~g~~~~d~~~I~i~k~~Ggs~~dS-~lv~G~vl~k---~~ 77 (105)
T d1a6da3 2 DDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISAVSILI---RG 77 (105)
T ss_dssp CHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESCEEEEE---CC
T ss_pred cHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHhccccCCCceecHHHhhhhhccCCChhhe-eeeeccceec---cC
Confidence 678899999999986 379999999999998552 2 3778999999999 9999999987 33
Q ss_pred ccccccccCceeecCceEEEecccC
Q 013743 93 YFITNQKNQKCELEDPLILVHEKKI 117 (437)
Q Consensus 93 ~~~~~~~~~~~~l~~p~Ill~d~~i 117 (437)
.||..+++|+|+++|+++
T Consensus 78 -------~mp~~~~~~kialld~~~ 95 (105)
T d1a6da3 78 -------GTDHVVSEVERALNDAIR 95 (105)
T ss_dssp -------SSSTTHHHHHHHHHHHHH
T ss_pred -------CCCcccCCcCeeEecchh
Confidence 367788999999999853
No 22
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=98.72 E-value=5.2e-10 Score=90.38 Aligned_cols=81 Identities=11% Similarity=0.227 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHhcCCc------hhHHHHHHHHHHHhccC--C---------cEEEEeCCCcccceeeEeceEE-----e
Q 013743 29 STSEEIAQVGTISANGE------REIGELIAKAMEKVGKE--G---------VITIHDGKTLYNELEVVEGMKL-----D 86 (437)
Q Consensus 29 ~~~~~L~~va~ts~~~~------~~ls~lv~~A~~~v~~~--g---------~I~~~~g~~~~ds~~~~~G~~~-----~ 86 (437)
+|++.|.++|+||++++ +.||+|+++|+..+.+. | .|.+.+|++++|| ++++|+++ +
T Consensus 3 ~D~e~L~~va~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~~~~~~~d~~~IkI~k~~Ggs~~dS-~li~G~v~~~~~~~ 81 (107)
T d1a6db3 3 DEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINKAVSILVRGE 81 (107)
T ss_dssp THHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESSCEEEEEEES
T ss_pred chHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHhhcccCCCcccCHHHeEEEeecCCChhhc-EEEeccceeeccCC
Confidence 45778999999999873 68999999999999542 1 3778999999999 99999877 3
Q ss_pred ecccCcccccccccCceeecCceEEEecccCC
Q 013743 87 RGYISPYFITNQKNQKCELEDPLILVHEKKIS 118 (437)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~ 118 (437)
+...+| +||+.++|| |+++||+|.
T Consensus 82 k~~~~~-------~Mpk~i~n~-I~lld~~LE 105 (107)
T d1a6db3 82 TEHVVD-------EMERSITDS-LHVVASALE 105 (107)
T ss_dssp SHHHHH-------HHHHHHHHH-HHHHHHHHH
T ss_pred ceeccC-------CCCccccCc-EEEEecCCc
Confidence 444444 478899998 999998753
No 23
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=98.06 E-value=2.1e-08 Score=93.07 Aligned_cols=119 Identities=29% Similarity=0.392 Sum_probs=83.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCCHH--HHHHHHHHhc-----CCchhHH-HHHHHHHHHh--------ccCCc
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSE--EIAQVGTISA-----NGEREIG-ELIAKAMEKV--------GKEGV 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~--~L~~va~ts~-----~~~~~ls-~lv~~A~~~v--------~~~g~ 64 (437)
+||+.|++||+.|.+.+++.|+++++++.+.. .+..++.++. |.++.++ .++.+|+... +.+|.
T Consensus 110 ~~p~~i~~gi~~a~~~v~~~L~~~s~~i~~~~~~~~v~~~~~~~~~k~~n~d~~iG~~Iv~~Al~~p~~~i~~nag~~g~ 189 (252)
T d1kp8a1 110 MNPMDLKRGIDKAVTVAVEELKALSVGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPS 189 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCBCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHH
T ss_pred CcchhhhhhhhhHHHHHHHHHHhcceeeccCchhhhhHHHHHhhhhcccCccHHHhHHHHHHHHHHHHHHHHHhhhhccc
Confidence 59999999999999999999999999997333 3444444432 4466666 5666665443 33331
Q ss_pred -----EEEEeCCCcccceeeEeceEEeecccCcccccccccCceeecCceEEEecccCCC
Q 013743 65 -----ITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISN 119 (437)
Q Consensus 65 -----I~~~~g~~~~ds~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~~ 119 (437)
+....++...|...-..|..|++||++|+|+++...+...+.+|.+|.+++.|.+
T Consensus 190 ~~~~~v~~~~~~~g~~~~~~~~g~~~~~G~idP~~Vt~~al~~a~~~~~~iL~te~~i~~ 249 (252)
T d1kp8a1 190 VVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTD 249 (252)
T ss_dssp HHHHHHHHSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred ccceeeeecCCCeeEEEEEEEEEEEEeeccCCcceeccHhhhhheeccceeEeecccccC
Confidence 2222333333443445589999999999999988777788889999988887654
No 24
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.02 E-value=0.00047 Score=53.24 Aligned_cols=44 Identities=68% Similarity=0.994 Sum_probs=40.5
Q ss_pred HHHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHc
Q 013743 256 QERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEE 299 (437)
Q Consensus 256 ~~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~ 299 (437)
.+|+.+++|.++.+.++++++.+++|++.+++|||+++|+|+++
T Consensus 54 vEG~~~~~GyiS~~fv~~~t~~E~~ekk~~veDAl~a~raa~~e 97 (97)
T d1ioka3 54 VERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQE 97 (97)
T ss_dssp EHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccccccCCCceeeeeeccceeecCHHHHHHHhcC
Confidence 35778899999999999999999999999999999999999864
No 25
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=97.01 E-value=7.5e-06 Score=75.68 Aligned_cols=117 Identities=21% Similarity=0.256 Sum_probs=75.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccc----cCCCHHHHHHHHHHhc------CCchhHHHHHHHHHHHhcc-----CCc-
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRAR----MISTSEEIAQVGTISA------NGEREIGELIAKAMEKVGK-----EGV- 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~----~v~~~~~L~~va~ts~------~~~~~ls~lv~~A~~~v~~-----~g~- 64 (437)
+||..|++||+.|.+.+++.|++++. |..+...+.....++. +.+....+.+.+|+..+.. .|.
T Consensus 111 ~~p~~i~~g~~~a~~~~~~~l~~~~~~~~~~~~g~~ei~~a~~l~~~a~~~~~~~~~a~~~~a~Al~~Ip~~la~N~G~d 190 (258)
T d1q3qa1 111 IHPSIITKGYALAAEKAQEILDEIAIRAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLD 190 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCC
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhhhccCCCchHHHHHHHHHHhhhcccchHHHHHHHHHHHhccchhhhhhhhcCCc
Confidence 59999999999999999999999874 4445555554443332 2123344566777665532 121
Q ss_pred ----EEE----EeCCCcccceeeEeceEEe---ecccCcccccccccCceeecCceEEEecccC
Q 013743 65 ----ITI----HDGKTLYNELEVVEGMKLD---RGYISPYFITNQKNQKCELEDPLILVHEKKI 117 (437)
Q Consensus 65 ----I~~----~~g~~~~ds~~~~~G~~~~---~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i 117 (437)
+.. ..+++....+.+.+|..++ +||++|+|++....+.....+|.||.+|..|
T Consensus 191 ~i~~v~~l~~~~~~~~~~~gvdv~~G~~~D~~~~Gii~p~~vk~~~l~~A~e~a~~IL~iD~iI 254 (258)
T d1q3qa1 191 TVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 254 (258)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cceehhhhhhhcccCCCceEEEEECCEEeEchHcCccccHHHHHHHHHHHHHHhCcceeEccEE
Confidence 111 1223344556788999999 8999999886544444445566677666543
No 26
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=96.99 E-value=1e-05 Score=74.43 Aligned_cols=118 Identities=23% Similarity=0.356 Sum_probs=80.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC----C------HHHHHHHHHHhcCCchhHH-HHHHHHHHHhccC-----C-
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS----T------SEEIAQVGTISANGEREIG-ELIAKAMEKVGKE-----G- 63 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~----~------~~~L~~va~ts~~~~~~ls-~lv~~A~~~v~~~-----g- 63 (437)
.||+.+++|++++.+.+++.|+++++++. + ..........+.++++.++ +++.+|+...... |
T Consensus 109 ~~~~~i~~g~~~a~~~al~~l~~~~~~~~~v~ggg~~~~~~~~~~~~~~~~~~g~~~~g~~iva~Al~~~~~~~~~nag~ 188 (255)
T d1we3a1 109 ANPLALKRGIEKAVEAAVEKIKALAIPVGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGY 188 (255)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTS
T ss_pred CccchhhhhhhhhhHHHHHHHHHHhhhcceeccchhhhhhhhhhhHhhccCCChHHHHHHHHHHHHHhhhHHHHHhhccc
Confidence 48999999999999999999999998775 1 1122233334445566666 8888888764321 1
Q ss_pred --cE----EEEeCCCcccceeeEeceEEe---ecccCcccccccccCceeecCceEEEecccCC
Q 013743 64 --VI----TIHDGKTLYNELEVVEGMKLD---RGYISPYFITNQKNQKCELEDPLILVHEKKIS 118 (437)
Q Consensus 64 --~I----~~~~g~~~~ds~~~~~G~~~~---~~~~~~~~~~~~~~~~~~l~~p~Ill~d~~i~ 118 (437)
.+ ......+..-.+.+.+|..++ +||++|+|+++...+.....+|.||.+|+.|.
T Consensus 189 ~~~~~~~~~~~~~~~~~~g~d~~~g~~~D~~e~Giidp~~V~~~a~~~A~~~a~~iL~~d~~I~ 252 (255)
T d1we3a1 189 EGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVA 252 (255)
T ss_dssp CHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred ccceeeeeeeecccCCceeEEeeccEEeehhhcCCcCchHhhHHHHHHHHHHhchHhhcchhhh
Confidence 10 001111111235677788877 89999999988777777888899998887653
No 27
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=96.85 E-value=8.3e-05 Score=68.14 Aligned_cols=96 Identities=29% Similarity=0.419 Sum_probs=64.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC--CHHHHHHHHHHhc-----CCchhHH-HHHHHH--------HHHhccCCc
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISA-----NGEREIG-ELIAKA--------MEKVGKEGV 64 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~L~~va~ts~-----~~~~~ls-~lv~~A--------~~~v~~~g~ 64 (437)
+||..+++|++.+.+.+++.|++++.++. +...+.+++.+.. +.++.++ +++.+| +..+|.+|.
T Consensus 110 ~~p~~i~~g~~~a~~~v~~~l~~~a~~i~~~g~~al~~~~~~l~~~~~~~~d~~~G~~iv~~Al~~p~~~i~~naG~dg~ 189 (252)
T d1ioka1 110 MNPMDLKRGIDVATAKVVEAIKSAARGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGA 189 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCBCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHH
T ss_pred CCcchhhhhHHHHHHHHHHHHHHhcCCCCCchHHhhHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 59999999999999999999999999886 4446666664432 2244444 454444 456777775
Q ss_pred EEEEeCCCcccceeeEe------ceEEeecccCccccc
Q 013743 65 ITIHDGKTLYNELEVVE------GMKLDRGYISPYFIT 96 (437)
Q Consensus 65 I~~~~g~~~~ds~~~~~------G~~~~~~~~~~~~~~ 96 (437)
+.+.......|....++ |..|++|+.+|++++
T Consensus 190 ~vv~~~~~~~~~~~g~~~~~~~~g~~~~~GiidP~kVt 227 (252)
T d1ioka1 190 VVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVV 227 (252)
T ss_dssp HHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHH
T ss_pred eEEEeecccCcCCEEEEceeeeEeeeecccccCcHHHH
Confidence 43322222333334444 777889999998865
No 28
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]}
Probab=96.06 E-value=0.0036 Score=48.20 Aligned_cols=43 Identities=70% Similarity=0.961 Sum_probs=38.9
Q ss_pred HHHHhhcCCeEEEEecCCchhHHHHhHhhHhhHHHHHHHHHHc
Q 013743 257 ERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEE 299 (437)
Q Consensus 257 ~rl~rl~g~~~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~ 299 (437)
+|+..+.|.++.+.+.+.++.+++|.+.+++|||+++|+|+++
T Consensus 55 EG~~~d~G~vS~~fvt~~te~E~~ekk~~veDaL~a~~aA~~e 97 (97)
T d1kp8a3 55 ERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEE 97 (97)
T ss_dssp HHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccceeecCcchhhhhhceeEEechHHHHHHHhcC
Confidence 4566678899999999999999999999999999999999863
No 29
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=90.30 E-value=0.18 Score=44.70 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=42.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC-----CHH------HHHHHHHHhcCCchhHHHHHHHHHHHh
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS-----TSE------EIAQVGTISANGEREIGELIAKAMEKV 59 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~-----~~~------~L~~va~ts~~~~~~ls~lv~~A~~~v 59 (437)
+||+.|++||++|.+.+++.|++++.++. +.. .+.+.+++...-.++..+.+++|+..+
T Consensus 98 ~~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~ggGa~e~~~a~~l~~~a~~~~g~~q~~i~~~a~Ale~i 167 (243)
T d1a6db1 98 VHPTVISEGYRMASEEAKRVIDEISTKIAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEI 167 (243)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCchhHHHHHHHhhhhhccCCHHHHHHHHHHHHhhcc
Confidence 59999999999999999999999988776 111 222333333333466777888888776
No 30
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=88.10 E-value=0.33 Score=42.96 Aligned_cols=89 Identities=17% Similarity=0.154 Sum_probs=53.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCC----CHHHH---HHHHHHhcC---CchhHHHHHHHHHHHhcc--------C
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS----TSEEI---AQVGTISAN---GEREIGELIAKAMEKVGK--------E 62 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~----~~~~L---~~va~ts~~---~~~~ls~lv~~A~~~v~~--------~ 62 (437)
+||+.|++||+.|.+.+++.|++++.+.. +...+ .+++..+-. .+....+.+++|+..+.. |
T Consensus 102 ~~p~~i~~g~~~a~~~a~~~L~~~a~~~~v~g~ga~e~~l~~~l~~~a~~~~g~eq~a~~~~a~Ale~ip~~laeNaG~D 181 (245)
T d1a6da1 102 VHPTVISNGYRLAVNEARKIIDEIAEKSFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGID 181 (245)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSC
T ss_pred CCchhhhhhHHHHHHHHHHHHHhhccceeecCchhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhhhhhhhhccCCCC
Confidence 59999999999999999999999876532 32222 233333322 245666778888876632 2
Q ss_pred C-cEEEEeCCCcccceeeEeceEEeeccc
Q 013743 63 G-VITIHDGKTLYNELEVVEGMKLDRGYI 90 (437)
Q Consensus 63 g-~I~~~~g~~~~ds~~~~~G~~~~~~~~ 90 (437)
. .+..+.+....++ .+..|+.++++..
T Consensus 182 ~i~iv~~l~~~~~~~-~~~~Gv~~~~g~i 209 (245)
T d1a6da1 182 PINTLIKLKADDEKG-RISVGVDLDNNGV 209 (245)
T ss_dssp HHHHHHHHHHHHHTT-CTTEEEETTTTEE
T ss_pred chhhhhhhhcccccC-CceeeEEccCCeE
Confidence 1 1212222222333 5556887776654
No 31
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=84.48 E-value=0.15 Score=43.21 Aligned_cols=30 Identities=33% Similarity=0.561 Sum_probs=27.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccCCC
Q 013743 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST 30 (437)
Q Consensus 1 ~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~ 30 (437)
+||+.|.+||+.|.+.+++.|++++.++.+
T Consensus 48 ~~p~~i~~Gi~~A~~~v~~~L~~~a~~v~g 77 (180)
T d1sjpa1 48 ANPLGLKRGIEKAVEKVTETLLKGAKIVAG 77 (180)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBEEET
T ss_pred CChHHHHhhHHHHHHHHHHHHHHHHhhhcc
Confidence 599999999999999999999999998863
No 32
>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=72.96 E-value=2.9 Score=30.93 Aligned_cols=48 Identities=19% Similarity=0.360 Sum_probs=36.6
Q ss_pred ceEEEEecCCCCcchhhhHHHHHHHhCCeEeccCcCCccccCCcCCCcceeEEEEe
Q 013743 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTIS 216 (437)
Q Consensus 161 ~~v~aV~~~~~~~~~~~~le~la~~tG~~ii~~~~~~~~~~~~~~~lG~~~~v~i~ 216 (437)
+.||+.. .|.+..+++|+.+..+|||++.++ +..++... |+-.-|.+.
T Consensus 5 ~~icc~g--pFt~mt~d~Le~mv~lCGAsVvk~-----~~~l~~~~-~~~~viVvq 52 (97)
T d1l0ba2 5 LQIYCCE--PFTNMPKDELERMLQLCGASVVKE-----LPLLTRDT-GAHPIVLVQ 52 (97)
T ss_dssp CEEEECS--CCSSSCHHHHHHHHHHTTCEEECS-----SSCGGGCC-SSCCEEEEC
T ss_pred ceEEEEc--cccCCCHHHHHHHHHHcCceeecC-----hhhcCCCC-CCeeEEEEc
Confidence 4567654 578999999999999999999999 76666554 665555554
No 33
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=37.97 E-value=9 Score=33.27 Aligned_cols=43 Identities=12% Similarity=0.225 Sum_probs=34.4
Q ss_pred ecCceEEEecccCC-----CHHHHHHHHHHHHhcCCCEEEEecCCcHH
Q 013743 105 LEDPLILVHEKKIS-----NLTAVVRVLELALKRQRPLLIVAEDVESE 147 (437)
Q Consensus 105 l~~p~Ill~d~~i~-----~~~~l~~~le~i~~~~~~lvi~~~~i~~~ 147 (437)
..+|+++++|-|-. ...++.+.+..+++.|..+|++..+++..
T Consensus 166 ~~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~til~vsHdl~~~ 213 (254)
T d1g6ha_ 166 MTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIV 213 (254)
T ss_dssp HTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTT
T ss_pred HhCcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHH
Confidence 47999999999854 34467888888888899999999888765
No 34
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=37.75 E-value=11 Score=32.37 Aligned_cols=43 Identities=14% Similarity=0.309 Sum_probs=34.9
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHHhcCCCEEEEecCCcHH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVESE 147 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~~~~~~lvi~~~~i~~~ 147 (437)
..+|+++++|-|-.. ..++.+.++++.+.|..+|++..+.+..
T Consensus 155 ~~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~l~~~ 202 (240)
T d1ji0a_ 155 MSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGA 202 (240)
T ss_dssp TTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred HhCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 579999999998543 4568888888888899999999888653
No 35
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=35.50 E-value=9.6 Score=32.77 Aligned_cols=43 Identities=14% Similarity=0.271 Sum_probs=34.3
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHHhcCCCEEEEecCCcHH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVESE 147 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~~~~~~lvi~~~~i~~~ 147 (437)
..+|+|+++|-|... ..++..++..+.+.|..+|++..++++.
T Consensus 149 ~~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l~~~ 196 (238)
T d1vpla_ 149 MVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEV 196 (238)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 579999999998653 3467778888888899999988887654
No 36
>d1gqoa_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Bacillus subtilis [TaxId: 1423]}
Probab=31.20 E-value=80 Score=24.38 Aligned_cols=82 Identities=11% Similarity=0.073 Sum_probs=54.2
Q ss_pred ceEEEeccc-C-------------CCHHHHHHHHHH-HHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCC
Q 013743 108 PLILVHEKK-I-------------SNLTAVVRVLEL-ALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFG 172 (437)
Q Consensus 108 p~Ill~d~~-i-------------~~~~~l~~~le~-i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~ 172 (437)
||||+++.| | .+.+++...+.+ ..+.|..+-+.|.....+...++..+. +...=+.+.+.++-
T Consensus 1 ~kiLilnGPNLnlLG~Rep~iYG~~TL~~i~~~~~~~a~~~~i~l~~~QSN~EgelI~~I~~~~--~~~dgiIiNPga~t 78 (141)
T d1gqoa_ 1 PHFLILNGPNVNRLGSREPEVFGRQTLTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAE--EQYSGIVLNPGALS 78 (141)
T ss_dssp CEEEEEECTTGGGTTSSCHHHHCSCCHHHHHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHHT--TTCSEEEEECGGGG
T ss_pred CEEEEEcCCCccccCCCCCCcCCccCHHHHHHHHHHHHHHcCCeeeeehhhHHHHHHHHHHHhh--hccceeeecchhhh
Confidence 789999887 2 235566655544 446689999999999999999996542 33334567777766
Q ss_pred cchhhhHHHHHHHhCCeEec
Q 013743 173 ENRKANMQDLAVLTGGDLIT 192 (437)
Q Consensus 173 ~~~~~~le~la~~tG~~ii~ 192 (437)
+.+-...+-| ..++..++.
T Consensus 79 htS~al~Dal-~~~~~P~iE 97 (141)
T d1gqoa_ 79 HYSYAIRDAV-SSISLPVVE 97 (141)
T ss_dssp GTCHHHHHHH-HTSCSCEEE
T ss_pred hhhhhHHHHH-HhcCCCEEE
Confidence 6654444444 445665553
No 37
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.06 E-value=37 Score=22.72 Aligned_cols=22 Identities=23% Similarity=0.472 Sum_probs=19.7
Q ss_pred hHhhHhhHHHHHHHHHHcCccc
Q 013743 282 KKDRVTDALNATKAAVEEGIVP 303 (437)
Q Consensus 282 ~~r~l~dAl~~~~~al~~gvvp 303 (437)
.+.+++|++.++..+++.|.++
T Consensus 13 ed~AieDaiy~L~~aL~~G~I~ 34 (64)
T d2f6ma1 13 QDYALTDTIEALSRMLHRGTIP 34 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHHcCCcC
Confidence 4789999999999999999775
No 38
>d1cf7b_ a.4.5.17 (B:) Cell cycle transcription factor DP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.31 E-value=17 Score=25.78 Aligned_cols=22 Identities=36% Similarity=0.327 Sum_probs=18.5
Q ss_pred chhHHHHhHhhHhhHHHHHHHH
Q 013743 275 SEAEVGEKKDRVTDALNATKAA 296 (437)
Q Consensus 275 t~~~l~E~~r~l~dAl~~~~~a 296 (437)
.....+.++|++.|||+++-++
T Consensus 45 ~~~d~KNIRRRVYDALNVLmA~ 66 (82)
T d1cf7b_ 45 SAYDQKNIRRRVYDALNVLMAM 66 (82)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhcchhhhHHHHHHHHHHHHH
Confidence 4567788999999999999765
No 39
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=27.82 E-value=15 Score=31.16 Aligned_cols=40 Identities=10% Similarity=0.277 Sum_probs=31.6
Q ss_pred CceEEEecccCCC-----HHHHHHHHHHHHhcCCCEEEEecCCcH
Q 013743 107 DPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVES 146 (437)
Q Consensus 107 ~p~Ill~d~~i~~-----~~~l~~~le~i~~~~~~lvi~~~~i~~ 146 (437)
+|+|+++|-|... ..++..+++.+.+.|..+|++..+++.
T Consensus 150 ~p~llllDEPt~gLD~~~~~~i~~~i~~l~~~g~tii~vtHdl~~ 194 (231)
T d1l7vc_ 150 AGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNH 194 (231)
T ss_dssp TCCEEEESSCSTTCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHH
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 6799999998653 345778888888889888888888665
No 40
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=26.90 E-value=21 Score=30.90 Aligned_cols=43 Identities=14% Similarity=0.365 Sum_probs=33.8
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHHhcCCCEEEEecCCcHH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELALKRQRPLLIVAEDVESE 147 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~~~~~~lvi~~~~i~~~ 147 (437)
..+|+++++|-|-.. ..++.+.+..+.+.|..+|++..+++..
T Consensus 165 ~~~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~g~til~vtHdl~~~ 212 (258)
T d1b0ua_ 165 AMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFA 212 (258)
T ss_dssp HTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHHHH
T ss_pred hcCCCEEEeccccccCCHHHHHHHHHhhhhhcccCCceEEEeCCHHHH
Confidence 479999999998543 3467888888888888888888777654
No 41
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=26.83 E-value=44 Score=23.83 Aligned_cols=34 Identities=56% Similarity=0.807 Sum_probs=30.9
Q ss_pred EEEEecCCchhHHHHhHhhHhhHHHHHHHHHHcC
Q 013743 267 AVLKIGGASEAEVGEKKDRVTDALNATKAAVEEG 300 (437)
Q Consensus 267 ~tI~v~G~t~~~l~E~~r~l~dAl~~~~~al~~g 300 (437)
..|-.|..|++++.+.+.+++++|...+.++.+|
T Consensus 56 ~~~d~Gy~Sp~fvtd~k~r~e~~l~~p~ili~dG 89 (89)
T d1sjpa3 56 AVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG 89 (89)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCccCceEEcccHHhhHHHHhCceEeeecC
Confidence 5788899999999999999999999999998876
No 42
>d2etva1 c.92.2.4 (A:25-358) Putative iron(III) transporter TM0189 {Thermotoga maritima [TaxId: 2336]}
Probab=21.86 E-value=82 Score=27.30 Aligned_cols=59 Identities=12% Similarity=0.083 Sum_probs=38.8
Q ss_pred HHHHHhcCCCEEEEecCCcHHHHHHHHHcccccCceEEEEecCCCCcch----hhhHHHHHHHhCCe
Q 013743 127 LELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENR----KANMQDLAVLTGGD 189 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~i~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~----~~~le~la~~tG~~ 189 (437)
+|+|...+++|||+...-.+.....+.+.++ +++++......... .+.++.++.++|-.
T Consensus 77 ~E~i~~l~PDLVi~~~~~~~~~~~~l~~~gi----pv~~~~~~~~~~~~~~~~~~~i~~lg~~~g~e 139 (334)
T d2etva1 77 LESLITLQPDVVFITYVDRKTAKDIQEKTGI----PVVVLSYGNLGTFEDEDLFRSIELAGKILGRE 139 (334)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTS----CEEEECCCCTTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCEEEEeCCCchhHHHHHHhcCC----CEEEecccccccCCHHHHHHHHHHHhcccCch
Confidence 5678888999999887666666666655554 46677554333211 24577788888853
No 43
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=21.49 E-value=27 Score=29.56 Aligned_cols=43 Identities=19% Similarity=0.313 Sum_probs=32.8
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHH-hcCCCEEEEecCCcHH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELAL-KRQRPLLIVAEDVESE 147 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~-~~~~~lvi~~~~i~~~ 147 (437)
+.+|+|+++|-|... ..++.+.+..+. +.|..+|++..+.++.
T Consensus 143 ~~~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~~~ 191 (229)
T d3d31a2 143 VTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEA 191 (229)
T ss_dssp TSCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred hccCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHHHH
Confidence 589999999998654 345777777764 4688898888887644
No 44
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=21.43 E-value=25 Score=26.30 Aligned_cols=37 Identities=24% Similarity=0.295 Sum_probs=25.9
Q ss_pred hhHhhHHHHHHHHHHcC---ccccchHHHHHHHHHHHhhcc
Q 013743 284 DRVTDALNATKAAVEEG---IVPGGGVALLYAAKELEKLST 321 (437)
Q Consensus 284 r~l~dAl~~~~~al~~g---vvpGGG~~e~~ls~~L~~~~~ 321 (437)
|.++||. .++..++.+ +|-|||.+=+++|..|.+...
T Consensus 15 rtl~Da~-~l~~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~ 54 (121)
T d1d7ya2 15 RTLEDAR-RIQAGLRPQSRLLIVGGGVIGLELAATARTAGV 54 (121)
T ss_dssp CSHHHHH-HHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCHHHHH-HHHHhhhcCCeEEEECcchhHHHHHHHhhcccc
Confidence 4566663 334444432 999999999999999987654
No 45
>d1w3ex1 d.79.3.1 (X:1-98) Eukaryotic ribosomal protein L30 (L30e) {Archaeon Thermococcus celer [TaxId: 2264]}
Probab=21.06 E-value=1.1e+02 Score=21.73 Aligned_cols=54 Identities=20% Similarity=0.316 Sum_probs=32.9
Q ss_pred HHHHHHHhcCCCEEEEecCCcHHHHHHHHH-cccccCceEEEEecCCCCcchhhhHHHHHHHhCC
Q 013743 125 RVLELALKRQRPLLIVAEDVESEALATLIL-NKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGG 188 (437)
Q Consensus 125 ~~le~i~~~~~~lvi~~~~i~~~al~~l~~-n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG~ 188 (437)
+.++.+.+....+||++.++++....-+.. ...++ ++++... ...++|+.++|=
T Consensus 22 ~v~kal~~gkaklVilA~D~~~~~~~~i~~~c~~~~-Ip~~~~~---------~t~~eLG~a~Gk 76 (98)
T d1w3ex1 22 KSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSG-IAVYEFE---------GTSVELGTLLGR 76 (98)
T ss_dssp HHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHT-CEEEEES---------SCHHHHHHHTTC
T ss_pred HHHHHHHcCCccEEEEECCCCHHHHHHHHHHHHhcC-CCeEEEC---------CCHHHHHHHhCC
Confidence 345666677789999999999887775532 11112 2232221 124688888885
No 46
>d1n2za_ c.92.2.2 (A:) Vitamin B12 binding protein BtuF {Escherichia coli [TaxId: 562]}
Probab=20.66 E-value=43 Score=27.84 Aligned_cols=56 Identities=18% Similarity=0.148 Sum_probs=33.9
Q ss_pred HHHHHhcCCCEEEEecCC-cHHHHHHHHHcccccCceEEEEecCCCCcchhhhHHHHHHHhC
Q 013743 127 LELALKRQRPLLIVAEDV-ESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTG 187 (437)
Q Consensus 127 le~i~~~~~~lvi~~~~i-~~~al~~l~~n~i~~~~~v~aV~~~~~~~~~~~~le~la~~tG 187 (437)
+|++...+++|||+.... .+...+.|...++ ++..+....+.++ ...++.++.++|
T Consensus 50 ~E~i~~l~PDlii~~~~~~~~~~~~~l~~~~i----~v~~~~~~~~~~~-~~~i~~lg~~~g 106 (245)
T d1n2za_ 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGI----KVMWVDATSIEQI-ANALRQLAPWSP 106 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTC----CEEECCCCSHHHH-HHHHHHHGGGCS
T ss_pred HHHHhhcCCcEEEEecCCCcHHHHHHHhhccc----ceeeeccCCHHHH-HHHHHHHHHHhh
Confidence 678889999999987554 4556667766654 3555443222222 245555555555
No 47
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}
Probab=20.30 E-value=56 Score=24.64 Aligned_cols=48 Identities=23% Similarity=0.268 Sum_probs=36.9
Q ss_pred ecCceEEEecccCCCHHHHHHHHHHHHhcCCCEEEEecCCcHHHHHHHHHc
Q 013743 105 LEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILN 155 (437)
Q Consensus 105 l~~p~Ill~d~~i~~~~~l~~~le~i~~~~~~lvi~~~~i~~~al~~l~~n 155 (437)
+++|-| ++|+ ++++-..+.++.+.+.++|+|+...+++++-++.+...
T Consensus 39 ~~~~DV-vIDF--S~p~~~~~~l~~~~~~~~p~ViGTTG~~~~~~~~i~~~ 86 (128)
T d1vm6a3 39 LDSPDV-VIDF--SSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLREL 86 (128)
T ss_dssp CSCCSE-EEEC--SCGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHH
T ss_pred hccCCE-EEEe--cCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHH
Confidence 345555 4466 55666777888888999999999999999988888764
No 48
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=20.22 E-value=26 Score=29.99 Aligned_cols=43 Identities=14% Similarity=0.198 Sum_probs=31.5
Q ss_pred ecCceEEEecccCCC-----HHHHHHHHHHHHh-cCCCEEEEecCCcHH
Q 013743 105 LEDPLILVHEKKISN-----LTAVVRVLELALK-RQRPLLIVAEDVESE 147 (437)
Q Consensus 105 l~~p~Ill~d~~i~~-----~~~l~~~le~i~~-~~~~lvi~~~~i~~~ 147 (437)
..+|+|+++|-|-.. ..++.+.+..+.+ .|..+|++..+++..
T Consensus 155 ~~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~~~ 203 (240)
T d1g2912 155 VRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEA 203 (240)
T ss_dssp HTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHH
T ss_pred hcCCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHHHH
Confidence 479999999988653 2356777776654 588888888887654
Done!