BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013745
(437 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 178/295 (60%), Gaps = 8/295 (2%)
Query: 76 FDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLR-EFTNEVK 134
F LR LQVA++ FS+ N LG GGFG VY+G + +G +AVK+L + QG +F EV+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS-LDWTTRYRIVMG 193
++ H+NL+ L G C E++LVY Y+ N S+ + ++ +S LDW R RI +G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
ARGL YLH+ +IIHRD+KA+NILLDE+ + DFGLA+L +D HV + GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRGT 206
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHD-GRLGKEKADLLSYTWT--LFQ 310
G++APEY G S KTDVF YGV++LE+++G++ D RL + D++ W L +
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD-DVMLLDWVKGLLK 265
Query: 311 GEKALELVDPSLAKCNRD-EAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
+K LVD L +D E IQ+ LLC Q S ERP M+ V ML GD
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 176/295 (59%), Gaps = 8/295 (2%)
Query: 76 FDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLR-EFTNEVK 134
F LR LQVA++ F + N LG GGFG VY+G + +G +AVK+L + QG +F EV+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS-LDWTTRYRIVMG 193
++ H+NL+ L G C E++LVY Y+ N S+ + ++ +S LDW R RI +G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
ARGL YLH+ +IIHRD+KA+NILLDE+ + DFGLA+L +D HV + G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRGX 198
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHD-GRLGKEKADLLSYTWT--LFQ 310
G++APEY G S KTDVF YGV++LE+++G++ D RL + D++ W L +
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD-DVMLLDWVKGLLK 257
Query: 311 GEKALELVDPSLAKCNRD-EAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
+K LVD L +D E IQ+ LLC Q S ERP M+ V ML GD
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 160/280 (57%), Gaps = 7/280 (2%)
Query: 78 LRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLL 137
L L+ ATN F +GHG FG VY+G++ +G ++A+K+ + +S QG+ EF E++ L
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-DKTKSSSLDWTTRYRIVMGVAR 196
+H +LV+L G C E E +L+Y+Y+ N +L ++ + S+ W R I +G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 197 GLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED-THVNTFRISGTHG 255
GL YLH A IIHRD+K+ NILLDE PKI+DFG+++ D TH+ + GT G
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-VKGTLG 206
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKAL 315
Y+ PEY + G L+ K+DV+S+GV++ E++ R L +E +L + +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 316 ELVDPSLAKCNRDEAAMCI-QLGLLCCQQSVAERPDMNSV 354
++VDP+LA R E+ + C S +RP M V
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 161/282 (57%), Gaps = 11/282 (3%)
Query: 78 LRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLL 137
L L+ ATN F +GHG FG VY+G++ +G ++A+K+ + +S QG+ EF E++ L
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-DKTKSSSLDWTTRYRIVMGVAR 196
+H +LV+L G C E E +L+Y+Y+ N +L ++ + S+ W R I +G AR
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 197 GLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED---THVNTFRISGT 253
GL YLH A IIHRD+K+ NILLDE PKI+DFG+++ G + TH+ + GT
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXV-VKGT 204
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEK 313
GY+ PEY + G L+ K+DV+S+GV++ E++ R L +E +L + +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 314 ALELVDPSLAKCNRDEAAMCI-QLGLLCCQQSVAERPDMNSV 354
++VDP+LA R E+ + C S +RP M V
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 18/294 (6%)
Query: 76 FDLRTLQVATNFFSDL------NQLGHGGFGPVYRGLMPNGQEIAVKKLS----VDSRQG 125
F L+ TN F + N++G GGFG VY+G + N +AVKKL+ + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 126 LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT 185
++F E+K++ K QH+NLV L G ++G + LVY Y+PN SL + + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
R +I G A G+ +LHE IHRDIK++NILLDE KISDFGLAR V
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL-SY 304
RI GT YMAPE AL G ++ K+D++S+GV++LEI++G D +E LL
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIK 247
Query: 305 TWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
+ + + +D + + + C + +RPD+ V +L
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 18/294 (6%)
Query: 76 FDLRTLQVATNFFSDL------NQLGHGGFGPVYRGLMPNGQEIAVKKLS----VDSRQG 125
F L+ TN F + N++G GGFG VY+G + N +AVKKL+ + + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 126 LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT 185
++F E+K++ K QH+NLV L G ++G + LVY Y+PN SL + + L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
R +I G A G+ +LHE IHRDIK++NILLDE KISDFGLAR V
Sbjct: 128 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL-SY 304
RI GT YMAPE AL G ++ K+D++S+GV++LEI++G D +E LL
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIK 241
Query: 305 TWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
+ + + +D + + + C + +RPD+ V +L
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 18/294 (6%)
Query: 76 FDLRTLQVATNFFSDL------NQLGHGGFGPVYRGLMPNGQEIAVKKLS----VDSRQG 125
F L+ TN F + N++G GGFG VY+G + N +AVKKL+ + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 126 LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT 185
++F E+K++ K QH+NLV L G ++G + LVY Y+PN SL + + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
R +I G A G+ +LHE IHRDIK++NILLDE KISDFGLAR V
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL-SY 304
RI GT YMAPE AL G ++ K+D++S+GV++LEI++G D +E LL
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIK 247
Query: 305 TWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
+ + + +D + + + C + +RPD+ V +L
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 127/221 (57%), Gaps = 15/221 (6%)
Query: 76 FDLRTLQVATNFFSDL------NQLGHGGFGPVYRGLMPNGQEIAVKKLS----VDSRQG 125
F L+ TN F + N+ G GGFG VY+G + N +AVKKL+ + + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 126 LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT 185
++F E+K+ K QH+NLV L G ++G + LVY Y PN SL + + L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
R +I G A G+ +LHE IHRDIK++NILLDE KISDFGLAR V
Sbjct: 125 XRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
RI GT Y APE AL G ++ K+D++S+GV++LEI++G
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 9/203 (4%)
Query: 88 FSDLN---QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLR--EFTNEVKLLLKIQHK 142
+ DLN ++G G FG V+R +G ++AVK L R EF EV ++ +++H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
N+V G + P +V EYL SL + LD R + VA+G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
P I+HR++K+ N+L+D++ K+ DFGL+RL T +++ +GT +MAPE
Sbjct: 155 NRNPP-IVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVL 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS 285
+ K+DV+S+GV++ E+ +
Sbjct: 212 RDEPSNEKSDVYSFGVILWELAT 234
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 105/207 (50%), Gaps = 25/207 (12%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS----RQGLREFTNEVKLLLKIQHKNLVTLFG 149
+G GGFG VYR G E+AVK D Q + E KL ++H N++ L G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL--DWTTRYRIVMGVARGLLYLHEEAPA 207
C + P LV E+ L+ + K + +W + +ARG+ YLH+EA
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIV 127
Query: 208 RIIHRDIKASNILLDEQLNP--------KISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
IIHRD+K+SNIL+ +++ KI+DFGLAR E +G + +MAP
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAP 183
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E S +DV+SYGVL+ E+++G
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
Query: 88 FSDLN---QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLR--EFTNEVKLLLKIQHK 142
+ DLN ++G G FG V+R +G ++AVK L R EF EV ++ +++H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
N+V G + P +V EYL SL + LD R + VA+G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
P I+HRD+K+ N+L+D++ K+ DFGL+RL + + +GT +MAPE
Sbjct: 155 NRNPP-IVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVL 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS 285
+ K+DV+S+GV++ E+ +
Sbjct: 212 RDEPSNEKSDVYSFGVILWELAT 234
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 44/320 (13%)
Query: 60 SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLS 119
S G D+W + + L+V +LG G FG V+ G +A+K L
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 120 VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
+ F E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T
Sbjct: 218 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET-G 274
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP 239
L + +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI- 330
Query: 240 GEDTHVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGR 293
ED F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G
Sbjct: 331 -EDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 294 LGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNS 353
+ +E D Q E+ + P +C + Q C ++ ERP
Sbjct: 386 VNREVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEY 430
Query: 354 VHLMLSGDSFTLPKP-GKPG 372
+ L D FT +P +PG
Sbjct: 431 LQAFLE-DYFTSTEPQXQPG 449
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 44/320 (13%)
Query: 60 SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLS 119
S G D+W + + L+V +LG G FG V+ G +A+K L
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 120 VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
+ F E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T
Sbjct: 218 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET-G 274
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP 239
L + +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI- 330
Query: 240 GEDTHVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGR 293
ED F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G
Sbjct: 331 -EDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 294 LGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNS 353
+ +E D Q E+ + P +C + Q C ++ ERP
Sbjct: 386 VNREVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEY 430
Query: 354 VHLMLSGDSFTLPKPG-KPG 372
+ L D FT +P +PG
Sbjct: 431 LQAFLE-DYFTSTEPQYQPG 449
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 44/320 (13%)
Query: 60 SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLS 119
S G D+W + + L+V +LG G FG V+ G +A+K L
Sbjct: 250 SKPQTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLK 300
Query: 120 VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
+ F E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T
Sbjct: 301 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET-G 357
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP 239
L + +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL
Sbjct: 358 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI- 413
Query: 240 GEDTHVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGR 293
ED F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G
Sbjct: 414 -EDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
Query: 294 LGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNS 353
+ +E D Q E+ + P +C + Q C ++ ERP
Sbjct: 469 VNREVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEY 513
Query: 354 VHLMLSGDSFTLPKP-GKPG 372
+ L D FT +P +PG
Sbjct: 514 LQAFLE-DYFTSTEPQXQPG 532
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 35/289 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG+G FG V+ G ++A+K L + F E +++ K++H LV L+
Sbjct: 14 IKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+E P +V EY+ SL F+ D + +L + VA G+ Y+ I
Sbjct: 73 VSEEP-IYIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIER---MNYI 127
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALHG 265
HRD++++NIL+ L KI+DFGLARL ED F I T APE AL+G
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWT----APEAALYG 181
Query: 266 YLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAK 324
++K+DV+S+G+L+ E+V+ GR + G +E L Q E+ +
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---------VLEQVERGYRM------P 226
Query: 325 CNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLPKPG-KPG 372
C +D +L + C ++ ERP + L D FT +P +PG
Sbjct: 227 CPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE-DYFTATEPQYQPG 274
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 44/320 (13%)
Query: 60 SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLS 119
S G D+W + + L+V +LG G FG V+ G +A+K L
Sbjct: 167 SKPQTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 120 VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
+ F E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T
Sbjct: 218 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGET-G 274
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP 239
L + +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI- 330
Query: 240 GEDTHVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGR 293
ED F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G
Sbjct: 331 -EDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 294 LGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNS 353
+ +E D Q E+ + P +C + Q C ++ ERP
Sbjct: 386 VNREVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEY 430
Query: 354 VHLMLSGDSFTLPKP-GKPG 372
+ L D FT +P +PG
Sbjct: 431 LQAFLE-DYFTSTEPQXQPG 449
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ KI+H+ LV L+ +E P +V EY+ SL F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 144/310 (46%), Gaps = 44/310 (14%)
Query: 70 DSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREF 129
D+W + + L+V +LG G FG V+ G +A+K L + F
Sbjct: 1 DAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAF 50
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYR 189
E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T L
Sbjct: 51 LQEAQVMKKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGET-GKYLRLPQLVD 108
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-- 247
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 109 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQ 163
Query: 248 ---FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLS 303
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +E D
Sbjct: 164 GAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD--- 216
Query: 304 YTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSF 363
Q E+ + P +C + Q C ++ ERP + L D F
Sbjct: 217 ------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEYLQAFLE-DYF 263
Query: 364 TLPKPG-KPG 372
T +P +PG
Sbjct: 264 TSTEPQYQPG 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 86 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 139
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT----APEAINY 193
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 242
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 243 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 278
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 144/310 (46%), Gaps = 44/310 (14%)
Query: 70 DSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREF 129
D+W + + L+V +LG G FG V+ G +A+K L + F
Sbjct: 4 DAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAF 53
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYR 189
E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T L
Sbjct: 54 LQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVD 111
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-- 247
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQ 166
Query: 248 ---FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLS 303
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +E D
Sbjct: 167 GAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD--- 219
Query: 304 YTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSF 363
Q E+ + P +C + Q C ++ ERP + L D F
Sbjct: 220 ------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEYLQAFLE-DYF 266
Query: 364 TLPKPG-KPG 372
T +P +PG
Sbjct: 267 TSTEPQYQPG 276
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 145/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 1 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 51
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T L
Sbjct: 52 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGET-GKYL 108
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 109 RLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 163
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 164 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 219
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 220 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEYLQA 264
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 265 FLE-DYFTSTEPQYQPG 280
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 77 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT----APEAINY 184
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 233
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 234 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 269
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 85 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 138
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT----APEAINY 192
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 241
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 242 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 277
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 145/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 1 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 51
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ +T L
Sbjct: 52 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGET-GKYL 108
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 109 RLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 163
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 164 NEWTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 219
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 220 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKEPEERPTFEYLQA 264
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 265 FLE-DYFTSTEPQYQPG 280
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 79 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 132
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT----APEAINY 186
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 235
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 236 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 271
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 83 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT----APEAINY 190
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 239
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 240 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 275
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 83 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT----APEAINY 190
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 239
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 240 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 275
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 87 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 140
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT----APEAINY 194
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 243
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 244 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 279
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 82 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 135
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT----APEAINY 189
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 238
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 239 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 274
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 32/279 (11%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 77 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN---TFRISGTHGYMAPEYALHGY 266
IHRD++A+NIL+ + L+ KI+DFGLARL + F I T APE +G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 186
Query: 267 LSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKC 325
++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P C
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD--NC 235
Query: 326 NRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
+ QL LC ++ +RP + + +L D FT
Sbjct: 236 PEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 269
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 32/279 (11%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 78 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 131
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN---TFRISGTHGYMAPEYALHGY 266
IHRD++A+NIL+ + L+ KI+DFGLARL + F I T APE +G
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGT 187
Query: 267 LSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKC 325
++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P C
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD--NC 236
Query: 326 NRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
+ QL LC ++ +RP + + +L D FT
Sbjct: 237 PEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 77 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT----APEAINY 184
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 233
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 234 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 269
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEXTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 72 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 125
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT----APEAINY 179
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 228
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 229 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 264
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 17/221 (7%)
Query: 75 FFDLRTLQVATNFFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREF 129
F D Q L QLG G FG V Y L N G+ +AVKKL + + LR+F
Sbjct: 2 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTT 186
E+++L +QH N+V G C + L+ EYLP SL DY + + +D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIK 118
Query: 187 RYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN 246
+ + +G+ YL R IHRD+ NIL++ + KI DFGL ++ P +D
Sbjct: 119 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 174
Query: 247 TFRISGTHG--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G + APE SV +DV+S+GV++ E+ +
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ ++G G FG V+ G N ++A+K + + +F E ++++K+ H LV L+G
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C E LV+E++ + L ++ +T+ T + + V G+ YL E A +I
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 128
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+ E K+SDFG+ R F +D + ++ + +PE S K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
+DV+S+GVL+ E+ S G+ ++ R E + +S + L++ A V + C R+
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRE 246
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 31/240 (12%)
Query: 56 AAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPV----YRGLMPN-G 110
A G + ED D + + +L F L QLG G FG V Y L N G
Sbjct: 25 AMGSAFEDRDPTQFEERHLKF--------------LQQLGKGNFGSVEMCRYDPLQDNTG 70
Query: 111 QEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEK--MLVYEYLPNKS 168
+ +AVKKL + + LR+F E+++L +QH N+V G C + L+ EYLP S
Sbjct: 71 EVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 130
Query: 169 L-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP 227
L DY + +D + + +G+ YL R IHRD+ NIL++ +
Sbjct: 131 LRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRV 184
Query: 228 KISDFGLARLFPGEDTHVNTFRISGTHG--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
KI DFGL ++ P +D + G + APE SV +DV+S+GV++ E+ +
Sbjct: 185 KIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 21/221 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQ----EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVTL 147
LG G FG VY+G+ +P G+ +A+K L+ + EF +E ++ + H +LV L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS----LDWTTRYRIVMGVARGLLYLHE 203
G C P LV + +P+ L ++ + + L+W + +A+G++YL E
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
R++HRD+ A N+L+ + KI+DFGLARL G++ N +MA E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 264 HGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLS 303
+ + ++DV+SYGV + E+++ G K +DG +E DLL
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 75 FFDLRTLQVATNFFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREF 129
F D Q L QLG G FG V Y L N G+ +AVKKL + + LR+F
Sbjct: 6 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTT 186
E+++L +QH N+V G C + L+ EYLP SL DY + +D
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIK 122
Query: 187 RYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN 246
+ + +G+ YL R IHRD+ NIL++ + KI DFGL ++ P +D
Sbjct: 123 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 178
Query: 247 TFRISGTHG--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G + APE SV +DV+S+GV++ E+ +
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 123/242 (50%), Gaps = 14/242 (5%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGL---REFTNEVKLLLKIQHKNLVTL 147
+ ++G G FG V+ G N ++A+K + R+G +F E ++++K+ H LV L
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+G C E LV+E++ + L ++ +T+ T + + V G+ YL E A
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---A 122
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
+IHRD+ A N L+ E K+SDFG+ R F +D + ++ + +PE
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 268 SVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCN 326
S K+DV+S+GVL+ E+ S G+ ++ R E + +S + L++ A V + C
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 241
Query: 327 RD 328
++
Sbjct: 242 KE 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 75 FFDLRTLQVATNFFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREF 129
F D Q L QLG G FG V Y L N G+ +AVKKL + + LR+F
Sbjct: 4 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTT 186
E+++L +QH N+V G C + L+ EYLP SL DY + +D
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIK 120
Query: 187 RYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN 246
+ + +G+ YL R IHRD+ NIL++ + KI DFGL ++ P +D
Sbjct: 121 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 176
Query: 247 TFRISGTHG--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G + APE SV +DV+S+GV++ E+ +
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 21/221 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQ----EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVTL 147
LG G FG VY+G+ +P G+ +A+K L+ + EF +E ++ + H +LV L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS----LDWTTRYRIVMGVARGLLYLHE 203
G C P LV + +P+ L ++ + + L+W + +A+G++YL E
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
R++HRD+ A N+L+ + KI+DFGLARL G++ N +MA E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 264 HGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLS 303
+ + ++DV+SYGV + E+++ G K +DG +E DLL
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 233
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 44/320 (13%)
Query: 60 SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLS 119
S G D+W + + L+V +LG G FG V+ G +A+K L
Sbjct: 168 SKPQTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLK 218
Query: 120 VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ +
Sbjct: 219 -PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM-G 275
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP 239
L + +A G+ Y+ +HRD++A+NIL+ E L K++DFGL RL
Sbjct: 276 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLI- 331
Query: 240 GEDTHVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGR 293
ED F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G
Sbjct: 332 -EDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 386
Query: 294 LGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNS 353
+ +E D Q E+ + P +C + Q C ++ ERP
Sbjct: 387 VNREVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEY 431
Query: 354 VHLMLSGDSFTLPKP-GKPG 372
+ L D FT +P +PG
Sbjct: 432 LQAFLE-DYFTSTEPQXQPG 450
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ SL F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD+ A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 75 FFDLRTLQVATNFFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREF 129
F D Q L QLG G FG V Y L N G+ +AVKKL + + LR+F
Sbjct: 5 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTT 186
E+++L +QH N+V G C + L+ EYLP SL DY + +D
Sbjct: 65 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIK 121
Query: 187 RYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN 246
+ + +G+ YL R IHRD+ NIL++ + KI DFGL ++ P +D
Sbjct: 122 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 177
Query: 247 TFRISGTHG--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G + APE SV +DV+S+GV++ E+ +
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 35/287 (12%)
Query: 93 QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCA 152
+LG G FG V+ G +A+K L + F E +++ K++H+ LV L+ +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 153 EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHR 212
E P +V EY+ SL F+ + L + +A G+ Y+ +HR
Sbjct: 75 EEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 129
Query: 213 DIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALHGYL 267
D++A+NIL+ E L K++DFGLARL ED F I T APE AL+G
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT----APEAALYGRF 183
Query: 268 SVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCN 326
++K+DV+S+G+L+ E+ + GR + G + +E D Q E+ + P +C
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD---------QVERGYRM--PCPPECP 232
Query: 327 RDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLPKPG-KPG 372
+ Q C ++ ERP + L D FT +P +PG
Sbjct: 233 ESLHDLMCQ----CWRKDPEERPTFEYLQAFLE-DYFTSTEPQYQPG 274
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 135/281 (48%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 73 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 126
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHR+++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT----APEAINY 180
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 229
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 230 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 265
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ L F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 75 FFDLRTLQVATNFFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREF 129
F D Q L QLG G FG V Y L N G+ +AVKKL + + LR+F
Sbjct: 3 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTT 186
E+++L +QH N+V G C + L+ EYLP SL DY + +D
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIK 119
Query: 187 RYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN 246
+ + +G+ YL R IHRD+ NIL++ + KI DFGL ++ P +D
Sbjct: 120 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 175
Query: 247 TFRISGTHG--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G + APE SV +DV+S+GV++ E+ +
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 35/287 (12%)
Query: 93 QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCA 152
+LG G FG V+ G +A+K L + F E +++ K++H+ LV L+ +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 153 EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHR 212
E P +V EY+ SL F+ + L + +A G+ Y+ +HR
Sbjct: 73 EEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 127
Query: 213 DIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALHGYL 267
D++A+NIL+ E L K++DFGLARL ED F I T APE AL+G
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWT----APEAALYGRF 181
Query: 268 SVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCN 326
++K+DV+S+G+L+ E+ + GR + G + +E D Q E+ + P +C
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD---------QVERGYRM--PCPPECP 230
Query: 327 RDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLPKPG-KPG 372
+ Q C ++ ERP + L D FT +P +PG
Sbjct: 231 ESLHDLMCQ----CWRKDPEERPTFEYLQAFLE-DYFTSTEPQYQPG 272
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 44/317 (13%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
G D+W + + L+V +LG G FG V+ G +A+K L +
Sbjct: 4 QTQGLAKDAWEIPRESLRLEV---------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 54
Query: 123 RQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
F E +++ K++H+ LV L+ +E P +V EY+ L F+ + L
Sbjct: 55 -MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEM-GKYL 111
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ +A G+ Y+ +HRD++A+NIL+ E L K++DFGLARL ED
Sbjct: 112 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI--ED 166
Query: 243 THVNT-----FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGK 296
F I T APE AL+G ++K+DV+S+G+L+ E+ + GR + G + +
Sbjct: 167 NEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 222
Query: 297 EKADLLSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHL 356
E D Q E+ + P +C + Q C ++ ERP +
Sbjct: 223 EVLD---------QVERGYRM--PCPPECPESLHDLMCQ----CWRKDPEERPTFEYLQA 267
Query: 357 MLSGDSFTLPKPG-KPG 372
L D FT +P +PG
Sbjct: 268 FLE-DYFTSTEPQYQPG 283
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ ++G G FG V+ G N ++A+K + + +F E ++++K+ H LV L+G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C E LV+E++ + L ++ +T+ T + + V G+ YL E A +I
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 125
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+ E K+SDFG+ R F +D + ++ + +PE S K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
+DV+S+GVL+ E+ S G+ ++ R E + +S + L++ A V + C ++
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 243
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ ++G G FG V+ G N ++A+K + + +F E ++++K+ H LV L+G
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C E LV+E++ + L ++ +T+ T + + V G+ YL E A +I
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 123
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+ E K+SDFG+ R F +D + ++ + +PE S K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
+DV+S+GVL+ E+ S G+ ++ R E + +S + L++ A V + C ++
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 241
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPE 190
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ ++G G FG V+ G N ++A+K + + +F E ++++K+ H LV L+G
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C E LV+E++ + L ++ +T+ T + + V G+ YL E A +I
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 145
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+ E K+SDFG+ R F +D + ++ + +PE S K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
+DV+S+GVL+ E+ S G+ ++ R E + +S + L++ A V + C ++
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 263
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 72
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 128
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPE 185
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 73
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 129
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPE 186
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPE 187
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPE 187
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPE 205
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPE 205
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 8/239 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ ++G G FG V+ G N ++A+K + + +F E ++++K+ H LV L+G
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C E LV E++ + L ++ +T+ T + + V G+ YL E A +I
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 126
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+ E K+SDFG+ R F +D + ++ + +PE S K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
+DV+S+GVL+ E+ S G+ ++ R E + +S + L++ A V + C R+
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRE 244
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 36/281 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G G V+ G ++AVK L S F E L+ ++QH+ LV L+
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P ++ EY+ N SL F+ KT S L + +A G+ ++ E
Sbjct: 77 VTQEP-IYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+NIL+ + L+ KI+DFGLARL ED F I T APE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWT----APEAINY 184
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ GR + G E L E+ +V P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPD-- 233
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFT 364
C + QL LC ++ +RP + + +L D FT
Sbjct: 234 NCPEE----LYQLMRLCWKERPEDRPTFDYLRSVLE-DFFT 269
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
Query: 75 FFDLRTLQVATNFFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREF 129
F D Q L QLG G FG V Y L N G+ +AVKKL + + LR+F
Sbjct: 2 FEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 130 TNEVKLLLKIQHKNLVTLFGCCAEGPEK--MLVYEYLPNKSLDYFIFDKTKSSSLDWTTR 187
E+++L +QH N+V G C + L+ E+LP SL ++ + +D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKL 119
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
+ + +G+ YL R IHRD+ NIL++ + KI DFGL ++ P +D
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXK 175
Query: 248 FRISGTHG--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G + APE SV +DV+S+GV++ E+ +
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHRD+ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPE 187
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 36/287 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G N ++AVK L + ++ F E L+ +QH LV L+
Sbjct: 18 VKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 151 CAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
++ EY+ SL D+ D+ L + +A G+ Y+ +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS--AQIAEGMAYIERK---NY 131
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+N+L+ E L KI+DFGLAR+ ED F I T APE
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWT----APEAINF 185
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K+DV+S+G+L+ EIV+ G+ + GR AD+++ L QG + P +
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN---ADVMT---ALSQGYRM-----PRVE 234
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLPKPGK 370
C DE ++ +C ++ ERP + + +L D F G+
Sbjct: 235 NCP-DELYDIMK---MCWKEKAEERPTFDYLQSVL--DDFYTATEGQ 275
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
L QLG G FG V Y L N G+ +AVKKL + + LR+F E+++L +QH N+V
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 75
Query: 146 TLFGCCAEGPEK--MLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
G C + L+ EYLP SL DY + +D + + +G+ YL
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL- 131
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R IHR++ NIL++ + KI DFGL ++ P +D + G + APE
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYYKVKEPGESPIFWYAPE 188
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
SV +DV+S+GV++ E+ +
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 53 GGRAAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQ 111
GGRA S +D D + LFF FSDL ++GHG FG VY + N +
Sbjct: 32 GGRAG--SLKDPDVA-----ELFFK----DDPEKLFSDLREIGHGSFGAVYFARDVRNSE 80
Query: 112 EIAVKKLSVDSRQG---LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKS 168
+A+KK+S +Q ++ EV+ L K++H N + GC LV EY +
Sbjct: 81 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA 140
Query: 169 LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPK 228
D K ++ + G +GL YLH +IHRD+KA NILL E K
Sbjct: 141 SDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVK 194
Query: 229 ISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGYLSVKTDVFSYGVLVLEIVS 285
+ DFG A + + V GT +MAPE L G K DV+S G+ +E+
Sbjct: 195 LGDFGSASIMAPANXFV------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 286 GR 287
+
Sbjct: 249 RK 250
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 24/286 (8%)
Query: 73 NLFFD-LRTLQVATNFFSDLNQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFT 130
NL+F + ++ + ++LG G +G VY G+ +AVK L D+ + + EF
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFL 76
Query: 131 NEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRI 190
E ++ +I+H NLV L G C P +V EY+P +L ++ + + Y +
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY-M 135
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
++ + YL ++ IHRD+ A N L+ E K++DFGL+RL G DT+
Sbjct: 136 ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGA 191
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLF 309
+ APE + S+K+DV+++GVL+ EI + G + G + DLL + +
Sbjct: 192 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRME 251
Query: 310 QGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVH 355
Q E P + + R C + S A+RP H
Sbjct: 252 QPEGC----PPKVYELMR-----------ACWKWSPADRPSFAETH 282
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 36/287 (12%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
+ +LG G FG V+ G N ++AVK L + ++ F E L+ +QH LV L+
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 151 CAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ ++ E++ SL D+ D+ L + +A G+ Y+ +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFS--AQIAEGMAYIERK---NY 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALH 264
IHRD++A+N+L+ E L KI+DFGLAR+ ED F I T APE
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWT----APEAINF 184
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
G ++K++V+S+G+L+ EIV+ G+ + GR AD++S L QG + P +
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN---ADVMS---ALSQGYRM-----PRME 233
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLPKPGK 370
C DE ++ +C ++ ERP + + +L D F G+
Sbjct: 234 NCP-DELYDIMK---MCWKEKAEERPTFDYLQSVL--DDFYTATEGQ 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 86 NFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQG---LREFTNEVKLLLKIQH 141
FSDL ++GHG FG VY + N + +A+KK+S +Q ++ EV+ L K++H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
N + GC LV EY + D K ++ + G +GL YL
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYL 131
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEY 261
H +IHRD+KA NILL E K+ DFG A + + V GT +MAPE
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEV 182
Query: 262 AL---HGYLSVKTDVFSYGVLVLEIVSGR 287
L G K DV+S G+ +E+ +
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 49/291 (16%)
Query: 91 LNQLGHGGFGPVYRGLM------PNGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKN 143
+ +LG FG VY+G + Q +A+K L + LRE F +E L ++QH N
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-------------DKTKSSSLDWTTRYRI 190
+V L G + +++ Y + L F+ D+T S+L+ +
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
V +A G+ YL ++H+D+ N+L+ ++LN KISD GL R E + +++
Sbjct: 134 VAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKL 186
Query: 251 SGTH----GYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYT 305
G +MAPE ++G S+ +D++SYGV++ E+ S G + + G
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG------------- 233
Query: 306 WTLFQGEKALELV-DPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVH 355
+ + +E++ + + C D A L + C + + RP +H
Sbjct: 234 ---YSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIH 281
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 49/291 (16%)
Query: 91 LNQLGHGGFGPVYRGLM------PNGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKN 143
+ +LG FG VY+G + Q +A+K L + LRE F +E L ++QH N
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 90
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-------------DKTKSSSLDWTTRYRI 190
+V L G + +++ Y + L F+ D+T S+L+ +
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
V +A G+ YL ++H+D+ N+L+ ++LN KISD GL R E + +++
Sbjct: 151 VAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKL 203
Query: 251 SGTH----GYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYT 305
G +MAPE ++G S+ +D++SYGV++ E+ S G + + G
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG------------- 250
Query: 306 WTLFQGEKALELV-DPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVH 355
+ + +E++ + + C D A L + C + + RP +H
Sbjct: 251 ---YSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIH 298
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 94 LGHGGFGPVYRGLMPNGQ-----EIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLVTL 147
+G G FG VY+G++ +A+K L + R +F E ++ + H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G ++ M++ EY+ N +LD F+ +K S+ ++ G+A G+ YL A
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYL---ANM 166
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALH 264
+HRD+ A NIL++ L K+SDFGL+R+ ED T+ SG + APE +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 265 GYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLA 323
+ +DV+S+G+++ E+++ G + + W L E + D
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPY---------------WELSNHEVMKAINDGFRL 269
Query: 324 KCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
D + QL + C QQ A RP + +L
Sbjct: 270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 45/289 (15%)
Query: 93 QLGHGGFGPVYRG----LMPNGQEI--AVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+LG G FG V+ L P +I AVK L S ++F E +LL +QH+++V
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFI----------FDKTKSSSLDWTTRYRIVMGVAR 196
+G C EG ++V+EY+ + L+ F+ + + L + I +A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 197 GLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG- 255
G++YL A +HRD+ N L+ E L KI DFG++R D + + G H
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR-----DVYSTDYYRVGGHTM 191
Query: 256 ----YMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQG 311
+M PE ++ + ++DV+S GV++ EI + GK+ W
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT--------YGKQ-------PWYQLSN 236
Query: 312 EKALELVDPS-LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLS 359
+ +E + + + R +L L C Q+ R ++ +H +L
Sbjct: 237 NEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLP-NKSLDYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P LDY K S L+W + +A+G
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 93 QLGHGGFGPVY----RGLMPNGQE--IAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+LG G FG V+ L+P + +AVK L S ++F E +LL +QH+++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIF------------DKTKSSSLDWTTRYRIVMGV 194
FG C EG ++V+EY+ + L+ F+ + L + V
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
A G++YL A +HRD+ N L+ + L KI DFG++R D + R
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKA 314
+M PE L+ + ++DV+S+GV++ EI + GK+ LS T + +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT--------YGKQPWYQLSNTEAIDCITQG 276
Query: 315 LELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLP 366
EL P C + A I G C Q+ +R + VH L + P
Sbjct: 277 RELERPR--ACPPEVYA--IMRG--CWQREPQQRHSIKDVHARLQALAQAPP 322
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 93 QLGHGGFGPVY----RGLMPNGQE--IAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+LG G FG V+ L+P + +AVK L S ++F E +LL +QH+++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIF------------DKTKSSSLDWTTRYRIVMGV 194
FG C EG ++V+EY+ + L+ F+ + L + V
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
A G++YL A +HRD+ N L+ + L KI DFG++R D + R
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE L+ + ++DV+S+GV++ EI +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 80 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 243
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 244 -----YELMRACWQWNPSDRPSFAEIH 265
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 79 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 133
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 242
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 243 -----YELMRACWQWNPSDRPSFAEIH 264
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 93 QLGHGGFGPVY----RGLMPNGQE--IAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+LG G FG V+ L+P + +AVK L S ++F E +LL +QH+++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIF------------DKTKSSSLDWTTRYRIVMGV 194
FG C EG ++V+EY+ + L+ F+ + L + V
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
A G++YL A +HRD+ N L+ + L KI DFG++R D + R
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE L+ + ++DV+S+GV++ EI +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G FG VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 76 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT + APE + S+
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKV---------- 239
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 240 -----YELMRACWQWNPSDRPSFAEIH 261
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 135
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 238
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLP-NKSLDYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P LDY K S L+W + +A+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 83 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 246
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 247 -----YELMRACWQWNPSDRPSFAEIH 268
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 82 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 136
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 245
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 246 -----YELMRACWQWNPSDRPSFAEIH 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 80 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 243
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 244 -----YELMRACWQWNPSDRPSFAEIH 265
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 83 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 246
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 247 -----YELMRACWQWNPSDRPSFAEIH 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 246
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 247 -----YELMRACWQWNPSDRPSFAEIH 268
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 139
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 242
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 80 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 243
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 244 -----YELMRACWQWNPSDRPSFAEIH 265
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 78 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 132
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 241
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 242 -----YELMRACWQWNPSDRPSFAEIH 263
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 83 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 137
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 246
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 247 -----YELMRACWQWNPSDRPSFAEIH 268
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 154
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 257
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 91 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 145
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 205 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 254
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 255 -----YELMRACWQWNPSDRPSFAEIH 276
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 78 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 132
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 241
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 242 -----YELMRACWQWNPSDRPSFAEIH 263
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 21/264 (7%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +LG G FG V G ++AVK + + EF E + ++K+ H LV +G
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C++ +V EY+ N L ++ ++ L+ + + V G+ +L + I
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFI 126
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+D L K+SDFG+ R + +D +V++ + APE + S K
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 271 TDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEA 330
+DV+++G+L+ E+ S LGK DL + + + + + L P LA +
Sbjct: 186 SDVWAFGILMWEVFS--------LGKMPYDLYTNSEVVLKVSQGHRLYRPHLA------S 231
Query: 331 AMCIQLGLLCCQQSVAERPDMNSV 354
Q+ C + +RP +
Sbjct: 232 DTIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 241
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 242 -----YELMRACWQWNPSDRPSFAEIH 263
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 78 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 241
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 242 -----YELMRACWQWNPSDRPSFAEIH 263
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT + APE + S+
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKV---------- 239
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 240 -----YELMRACWQWNPSDRPSFAEIH 261
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 241
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 242 -----YELMRACWQWNPSDRPSFAEIH 263
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD---SRQGLREFTNEVKLLLKIQHK 142
F+ L+++G G FG VY+G+ + +E+ K+ +D + + + E+ +L +
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ FG + + ++ EYL S D K L+ T I+ + +GL YLH
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLH 133
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
E R IHRDIKA+N+LL EQ + K++DFG+A DT + GT +MAPE
Sbjct: 134 SE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVI 188
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
K D++S G+ +E+ G
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKG 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 78 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 241
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 242 -----YELMRACWQWNPSDRPSFAEIH 263
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 83 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT---FRISGTHGYMAPEYALHGY 266
IHRD+ A N L+ E K++DFGL+RL G+ + F I T APE +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYNK 193
Query: 267 LSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKC 325
S+K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV------- 246
Query: 326 NRDEAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 247 --------YELMRACWQWNPSDRPSFAEIH 268
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A G
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 115/227 (50%), Gaps = 21/227 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGL-----REFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ + ++ R+ +E +E ++ + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 163
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLS 303
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 76 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT + APE + S+
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKV---------- 239
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 240 -----YELMRACWQWNPSDRPSFAEIH 261
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCA 152
LG G FG + G+ + +K+L + R F EVK++ ++H N++ G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 153 EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHR 212
+ + EY+ +L I K+ S W+ R +A G+ YLH IIHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 213 DIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR------------ISGTHGYMAPE 260
D+ + N L+ E N ++DFGLARL E T R + G +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
K DVFS+G+++ EI+ GR N D
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 133
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E K++DFGL+RL G DT + APE + S+
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 242
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 243 -----YELMRACWQWNPSDRPSFAEIH 264
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGLAR+ + T R +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 122/239 (51%), Gaps = 25/239 (10%)
Query: 68 GADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQG- 125
GA + F R +A N Q+G GGFG V++G L+ + +A+K L + +G
Sbjct: 1 GAMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE 60
Query: 126 ------LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
+EF EV ++ + H N+V L+G P +V E++P L + + D K+
Sbjct: 61 TEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KA 116
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNIL---LDEQ--LNPKISDFGL 234
+ W+ + R+++ +A G+ Y+ + P I+HRD+++ NI LDE + K++DFGL
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175
Query: 235 ARLFPGEDTHVNTFRISGTHGYMAPEY--ALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
++ + H + + G +MAPE A + K D +S+ +++ I++G D
Sbjct: 176 SQ----QSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 33/268 (12%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 18 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I ARG+ YLH ++ I
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E KI DFGLA + ++SG+ +MAPE
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 267 LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELV-----DPS 321
S ++DV+++G+++ E+++G+ L Y+ + ++ +E+V P
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ--------------LPYS-NINNRDQIIEMVGRGSLSPD 234
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERP 349
L+K + +L C ++ ERP
Sbjct: 235 LSKVRSNCPKRMKRLMAECLKKKRDERP 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 324 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 378
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHR++ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 487
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 488 -----YELMRACWQWNPSDRPSFAEIH 509
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 161 KYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + ++ + ++ + YL ++
Sbjct: 282 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 336
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHR++ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 396 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 445
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 446 -----YELMRACWQWNPSDRPSFAEIH 467
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 32 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 148
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---G 255
YL + +HRD+ A NIL++ L K+SDFGL+R+ ED + G
Sbjct: 149 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIR 203
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +PE + + +DV+SYG+++ E++S
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + L G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFG A+L E+ + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 92 NQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
++LG G +G VY G+ +AVK L D+ + + EF E ++ +I+H NLV L G
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 151 CAEGPEKMLVYEYLPNKS-LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C P ++ E++ + LDY + + + ++ + YL ++
Sbjct: 285 CTREPPFYIITEFMTYGNLLDY--LRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 339
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHR++ A N L+ E K++DFGL+RL G DT+ + APE + S+
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 270 KTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRD 328
K+DV+++GVL+ EI + G + G + +LL + + + E E V
Sbjct: 399 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV---------- 448
Query: 329 EAAMCIQLGLLCCQQSVAERPDMNSVH 355
+L C Q + ++RP +H
Sbjct: 449 -----YELMRACWQWNPSDRPSFAEIH 470
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + L G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 15 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 131
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 132 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFG A+L E+ + +M
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFG A+L E+ + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFG A+L E+ + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + L G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFGLA+L E+ + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA + ++SG+ +MAPE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 42 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 158
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 159 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFG A+L E+ + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ LF
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA + ++SG+ +MAPE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 41 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA + ++SG+ +MAPE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA + ++SG+ +MAPE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 21/226 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEI----AVKKL-SVDSRQGLREFTNEVKLLLKIQH 141
F + LG G FG VY+GL +P G+++ A+K+L S + +E +E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARG 197
++ L G C + L+ + +P L DY K S L+W + +A+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
+ YL + R++HRD+ A N+L+ + KI+DFG A+L E+ + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
A E LH + ++DV+SYGV V E+++ G K +DG E + +L
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA + ++SG+ +MAPE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 16 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA + ++SG+ +MAPE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V EY+ N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---G 255
YL + +HRD+ A NIL++ L K+SDFGL R+ ED + G
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVL--EDDPEAAYTTRGGKIPIR 215
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +PE + + +DV+SYG+++ E++S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 33/268 (12%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ LF
Sbjct: 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 86
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I ARG+ YLH ++ I
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E KI DFGLA ++SG+ +MAPE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 267 LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELV-----DPS 321
S ++DV+++G+++ E+++G+ L Y+ + ++ +E+V P
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ--------------LPYS-NINNRDQIIEMVGRGSLSPD 246
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERP 349
L+K + +L C ++ ERP
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDERP 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 94 LGHGGFGPVYRGLM--PNGQE--IAVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG V G + P +E +A+K L V + + R+F E ++ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G + M+V EY+ N SLD F+ K ++ G++ G+ YL +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYLSDMG--- 144
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRD+ A NIL++ L K+SDFGL+R+ ED + G + APE
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 266 YLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAK 324
+ +DV+SYG+++ E+VS G + + ++ + + L PS
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL-----------PSPMD 251
Query: 325 CNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
C A QL L C Q+ RP + + ML
Sbjct: 252 C----PAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 33/268 (12%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I ARG+ YLH ++ I
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E KI DFGLA ++SG+ +MAPE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 267 LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELV-----DPS 321
S ++DV+++G+++ E+++G+ L Y+ + ++ +E+V P
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ--------------LPYS-NINNRDQIIEMVGRGSLSPD 246
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERP 349
L+K + +L C ++ ERP
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDERP 274
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA + ++SG+ +MAPE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 25/239 (10%)
Query: 68 GADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQG- 125
GA + F R +A N Q+G GGFG V++G L+ + +A+K L + +G
Sbjct: 1 GAMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE 60
Query: 126 ------LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
+EF EV ++ + H N+V L+G P +V E++P L + + D K+
Sbjct: 61 TEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KA 116
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNIL---LDEQ--LNPKISDFGL 234
+ W+ + R+++ +A G+ Y+ + P I+HRD+++ NI LDE + K++DFG
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGT 175
Query: 235 ARLFPGEDTHVNTFRISGTHGYMAPEY--ALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
++ + H + + G +MAPE A + K D +S+ +++ I++G D
Sbjct: 176 SQ----QSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 121/239 (50%), Gaps = 25/239 (10%)
Query: 68 GADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQG- 125
GA + F R +A N Q+G GGFG V++G L+ + +A+K L + +G
Sbjct: 1 GAMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE 60
Query: 126 ------LREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
+EF EV ++ + H N+V L+G P +V E++P L + + D K+
Sbjct: 61 TEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KA 116
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNIL---LDEQ--LNPKISDFGL 234
+ W+ + R+++ +A G+ Y+ + P I+HRD+++ NI LDE + K++DF L
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSL 175
Query: 235 ARLFPGEDTHVNTFRISGTHGYMAPEY--ALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
++ + H + + G +MAPE A + K D +S+ +++ I++G D
Sbjct: 176 SQ----QSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 47/297 (15%)
Query: 91 LNQLGHGGFGPVYR----GLMPNG--QEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKN 143
+ +G G FG V++ GL+P +AVK L ++ ++ +F E L+ + + N
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS-----SSLDWTTRYR--------- 189
+V L G CA G L++EY+ L+ F+ + S D +TR R
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 190 -------IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
I VA G+ YL E + +HRD+ N L+ E + KI+DFGL+R D
Sbjct: 172 SCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 243 THVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADL 301
+ + +M PE + + ++DV++YGV++ EI S G + + G +E +
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE---V 285
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
+ Y + D ++ C + L LC + A+RP S+H +L
Sbjct: 286 IYY------------VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 330
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 29/269 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEIAV--KKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG V G + P +++AV K L V + + R+F E ++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G G M+V E++ N +LD F+ + ++ G+A G+ YL A
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQLVGMLRGIAAGMRYL---ADMG 165
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRD+ A NIL++ L K+SDFGL+R+ ED + +G + APE +
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVI--EDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 266 YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKC 325
+ +DV+SYG+++ E++S G+ +S + E+ L P
Sbjct: 224 KFTSASDVWSYGIVMWEVMS--------YGERPYWDMSNQDVIKAIEEGYRLPAPM---- 271
Query: 326 NRDEAAMCIQLGLLCCQQSVAERPDMNSV 354
D A QL L C Q+ AERP +
Sbjct: 272 --DCPAGLHQLMLDCWQKERAERPKFEQI 298
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA ++SG+ +MAPE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 129/278 (46%), Gaps = 17/278 (6%)
Query: 54 GRAAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEI 113
G ++A G G SW + D + L L +LG G FG V G ++
Sbjct: 1 GPLGSKNAPSTAGLGYGSWEI--DPKDLTF-------LKELGTGQFGVVKYGKWRGQYDV 51
Query: 114 AVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFI 173
A+K + + EF E K+++ + H+ LV L+G C + ++ EY+ N L ++
Sbjct: 52 AIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 174 FDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFG 233
+ + V + YL + + +HRD+ A N L+++Q K+SDFG
Sbjct: 111 --REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 234 LARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDG 292
L+R + +D + ++ + PE ++ S K+D++++GVL+ EI S G+ ++
Sbjct: 166 LSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 293 RLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEA 330
E A+ ++ L++ A E V + C ++A
Sbjct: 225 FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKA 262
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 14/248 (5%)
Query: 92 NQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDS--RQGL-REFTNEVKLLLKIQHKNLVTL 147
N LG G F VYR + G E+A+K + + + G+ + NEVK+ +++H +++ L
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + LV E N ++ ++ ++ K S + + + + G+LYLH
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLHSHG-- 132
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
I+HRD+ SN+LL +N KI+DFGLA + H + + GT Y++PE A
Sbjct: 133 -ILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGK---EKADLLSYTWTLFQGEKALELVDPSLAK 324
+++DV+S G + ++ GR D K K L Y F +A +L+ L +
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRR 249
Query: 325 CNRDEAAM 332
D ++
Sbjct: 250 NPADRLSL 257
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 34 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA ++SG+ +MAPE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ 226
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 92 NQLGHGGFGPVYRG----LMPNGQE--IAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
+LG G FG V+ L P + +AVK L + ++F E +LL +QH+++V
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIF-------------DKTKSSSLDWTTRYRIVM 192
+G C +G ++V+EY+ + L+ F+ + L + I
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+A G++YL A +HRD+ N L+ L KI DFG++R D + + G
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR-----DVYSTDYYRVG 192
Query: 253 THG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
H +M PE ++ + ++DV+S+GV++ EI +
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTLFG 149
++G G FG VY+G ++AVK L+V + Q L+ F NEV +L K +H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ P+ +V ++ SL + + + + I A+G+ YLH ++ I
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGY 266
IHRD+K++NI L E L KI DFGLA ++SG+ +MAPE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
S ++DV+++G+++ E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 17/278 (6%)
Query: 54 GRAAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEI 113
G ++A G G SW + D + L L +LG G FG V G ++
Sbjct: 1 GPLGSKNAPSTAGLGYGSWEI--DPKDLTF-------LKELGTGQFGVVKYGKWRGQYDV 51
Query: 114 AVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFI 173
A+K + + EF E K+++ + H+ LV L+G C + ++ EY+ N L ++
Sbjct: 52 AIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 174 FDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFG 233
+ + V + YL + + +HRD+ A N L+++Q K+SDFG
Sbjct: 111 --REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 234 LARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDG 292
L+R + +D ++ + PE ++ S K+D++++GVL+ EI S G+ ++
Sbjct: 166 LSR-YVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 293 RLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDEA 330
E A+ ++ L++ A E V + C ++A
Sbjct: 225 FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKA 262
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
F L +LG G +G VY+ + GQ +A+K++ V+S L+E E+ ++ + ++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
+G + + +V EY S+ I + K+ + D I+ +GL YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--ILQSTLKGLEYLHF--- 143
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
R IHRDIKA NILL+ + + K++DFG+A D + GT +MAPE
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
+ D++S G+ +E+ G+
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V E + N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---G 255
YL + +HRD+ A NIL++ L K+SDFGL+R+ ED + G
Sbjct: 161 KYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIR 215
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +PE + + +DV+SYG+++ E++S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +LG G FG V G ++A+K + + EF E K+++ + H+ LV L+G
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C + ++ EY+ N L ++ + + V + YL + + +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 133
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+++Q K+SDFGL+R + +D + ++ + PE ++ S K
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDE 329
+D++++GVL+ EI S G+ ++ E A+ ++ L++ A E V + C ++
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK 252
Query: 330 A 330
A
Sbjct: 253 A 253
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 21/220 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEI----AVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTL 147
LG G FG VY+G+ +P+G+ + A+K L + S + +E +E ++ + + L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 148 FGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSS---LDWTTRYRIVMGVARGLLYLHE 203
G C + LV + +P L D+ ++ + S L+W M +A+G+ YL +
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWC------MQIAKGMSYLED 137
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
R++HRD+ A N+L+ + KI+DFGLARL ++T + +MA E L
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 264 HGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLL 302
+ ++DV+SYGV V E+++ G K +DG +E DLL
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +LG G FG V G ++A+K + + EF E K+++ + H+ LV L+G
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C + ++ EY+ N L ++ + + V + YL + + +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 126
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+++Q K+SDFGL+R + +D + ++ + PE ++ S K
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDE 329
+D++++GVL+ EI S G+ ++ E A+ ++ L++ A E V + C ++
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK 245
Query: 330 A 330
A
Sbjct: 246 A 246
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 15 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V E + N SLD F+ + + ++ G+A G+
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 131
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---G 255
YL + +HRD+ A NIL++ L K+SDFGL+R+ ED + G
Sbjct: 132 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIR 186
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +PE + + +DV+SYG+++ E++S
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +LG G FG V G ++A+K + + EF E K+++ + H+ LV L+G
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C + ++ EY+ N L ++ + + V + YL + + +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+++Q K+SDFGL+R + +D + ++ + PE ++ S K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDE 329
+D++++GVL+ EI S G+ ++ E A+ ++ L++ A E V + C ++
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK 246
Query: 330 A 330
A
Sbjct: 247 A 247
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +LG G FG V G ++A+K + + EF E K+++ + H+ LV L+G
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C + ++ EY+ N L ++ + + V + YL + + +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 122
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+++Q K+SDFGL+R + +D + ++ + PE ++ S K
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDE 329
+D++++GVL+ EI S G+ ++ E A+ ++ L++ A E V + C ++
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK 241
Query: 330 A 330
A
Sbjct: 242 A 242
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 FFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
F+ L ++G G FG V++G+ Q++ K+ +D + + + E+ +L +
Sbjct: 24 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ +G +G + ++ EYL S D ++ D ++ + +GL YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILKGLDYLHS 138
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
E + IHRDIKA+N+LL EQ + K++DFG+A NTF GT +MAPE
Sbjct: 139 E---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVIQ 193
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGR 287
K D++S G+ +E+ G
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGE 217
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 84 ATNFFSDLNQLGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLK 138
ATN D +G G FG V G + P+ +EI A+K L V + + R+F E ++ +
Sbjct: 44 ATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H N++ L G + M+V E + N SLD F+ + + ++ G+A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH-GYM 257
YL + +HRD+ A NIL++ L K+SDFGL+R+ + T R +
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVS 285
+PE + + +DV+SYG+++ E++S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 18/229 (7%)
Query: 67 SGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--- 121
SG D + NL+F + F+ L ++G G FG V++G+ Q++ K+ +D
Sbjct: 9 SGVDLGTENLYFQSMDPE---ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEE 64
Query: 122 SRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS 181
+ + + E+ +L + + +G + + ++ EYL S D +
Sbjct: 65 AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGP 120
Query: 182 LDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGE 241
LD T I+ + +GL YLH E + IHRDIKA+N+LL E K++DFG+A
Sbjct: 121 LDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 242 DTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNH 290
NTF GT +MAPE K D++S G+ +E+ G H
Sbjct: 178 QIKRNTF--VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 33/245 (13%)
Query: 67 SGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQ 124
SG D + NL+F LQ+ L G FG V++ + N + +AVK + +Q
Sbjct: 10 SGVDLGTENLYFQSMPLQL-------LEVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQ 61
Query: 125 GLREFTNEVKLLLKIQHKNLVTLFGCCAEGP----EKMLVYEYLPNKSLDYFIFDKTKSS 180
+ EV L ++H+N++ G G + L+ + SL F+ K++
Sbjct: 62 SWQN-EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KAN 116
Query: 181 SLDWTTRYRIVMGVARGLLYLHEEAPA-------RIIHRDIKASNILLDEQLNPKISDFG 233
+ W I +ARGL YLHE+ P I HRDIK+ N+LL L I+DFG
Sbjct: 117 VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176
Query: 234 LARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS------VKTDVFSYGVLVLEIVSGR 287
LA F + +T GT YMAPE L G ++ ++ D+++ G+++ E+ S
Sbjct: 177 LALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235
Query: 288 KNHDG 292
DG
Sbjct: 236 TAADG 240
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAE 153
+G G FG V + +++A+K++ +S + + F E++ L ++ H N+V L+G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 154 GPEKMLVYEYLPNKSLDYFIFDK------TKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
LV EY SL + T + ++ W + ++G+ YLH P
Sbjct: 74 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC------LQCSQGVAYLHSMQPK 125
Query: 208 RIIHRDIKASNILLDEQLNP-KISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
+IHRD+K N+LL KI DFG A D + G+ +MAPE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSN 180
Query: 267 LSVKTDVFSYGVLVLEIVSGRKNHD 291
S K DVFS+G+++ E+++ RK D
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAE 153
+G G FG V + +++A+K++ +S + + F E++ L ++ H N+V L+G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 154 GPEKMLVYEYLPNKSLDYFIFDK------TKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
LV EY SL + T + ++ W + ++G+ YLH P
Sbjct: 73 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC------LQCSQGVAYLHSMQPK 124
Query: 208 RIIHRDIKASNILLDEQLNP-KISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
+IHRD+K N+LL KI DFG A D + G+ +MAPE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSN 179
Query: 267 LSVKTDVFSYGVLVLEIVSGRKNHD 291
S K DVFS+G+++ E+++ RK D
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 8/241 (3%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +LG G FG V G ++A+K + + EF E K+++ + H+ LV L+G
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
C + ++ EY+ N L ++ + + V + YL + + +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVK 270
HRD+ A N L+++Q K+SDFGL+R + +D + ++ + PE ++ S K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 271 TDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKCNRDE 329
+D++++GVL+ EI S G+ ++ E A+ ++ L++ A E V + C ++
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK 246
Query: 330 A 330
A
Sbjct: 247 A 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD---SRQGLREFTNEVKLLLKIQHK 142
F+ L ++G G FG V++G+ Q++ K+ +D + + + E+ +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ +G + + ++ EYL S D + LD T I+ + +GL YLH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLH 121
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
E + IHRDIKA+N+LL E K++DFG+A NTF GT +MAPE
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVI 176
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNH 290
K D++S G+ +E+ G H
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPH 204
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNG---QEIAVKKL-SVDSRQGLREFTNEVKLLLKI-QHK 142
F D+ +G G FG V + + + A+K++ S+ R+F E+++L K+ H
Sbjct: 29 FQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSL-DY------------FIFDKTKSSSLDWTTRYR 189
N++ L G C L EY P+ +L D+ F + +S+L
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR 249
VARG+ YL ++ + IHRD+ A NIL+ E KI+DFGL+R G++ +V
Sbjct: 147 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTM 200
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MA E + + +DV+SYGVL+ EIVS
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNG---QEIAVKKL-SVDSRQGLREFTNEVKLLLKI-QHK 142
F D+ +G G FG V + + + A+K++ S+ R+F E+++L K+ H
Sbjct: 19 FQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 76
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSL-DY------------FIFDKTKSSSLDWTTRYR 189
N++ L G C L EY P+ +L D+ F + +S+L
Sbjct: 77 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR 249
VARG+ YL ++ + IHRD+ A NIL+ E KI+DFGL+R G++ +V
Sbjct: 137 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTM 190
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MA E + + +DV+SYGVL+ EIVS
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD---SRQGLREFTNEVKLLLKIQHK 142
F+ L ++G G FG V++G+ Q++ K+ +D + + + E+ +L +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ +G + + ++ EYL S D + LD T I+ + +GL YLH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLH 136
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
E + IHRDIKA+N+LL E K++DFG+A DT + GT +MAPE
Sbjct: 137 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVI 191
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNH 290
K D++S G+ +E+ G H
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPH 219
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD---SRQGLREFTNEVKLLLKIQHK 142
F+ L ++G G FG V++G+ Q++ K+ +D + + + E+ +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ +G + + ++ EYL S D + LD T I+ + +GL YLH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLH 121
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
E + IHRDIKA+N+LL E K++DFG+A DT + GT +MAPE
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVI 176
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNH 290
K D++S G+ +E+ G H
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPH 204
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
++QLG G FG V Y L N G +AVK+L R+F E+++L K H + +
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFI 70
Query: 146 TLFGCCAEGP---EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ + GP E LV EYLP+ L F+ + + LD + + +G+ YL
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG--YMAPE 260
R +HRD+ A NIL++ + + KI+DFGLA+L P D R G + APE
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDXXVVREPGQSPIFWYAPE 184
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVS 285
S ++DV+S+GV++ E+ +
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 94 LGHGGFGPVYRG--LMPNGQEI--AVKKL-SVDSRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG V G +P +EI A+K L S + + R+F +E ++ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G + M++ E++ N SLD F+ + ++ G+A G+ YL A
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 155
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYAL 263
+HRD+ A NIL++ L K+SDFGL+R F +DT T+ S G + APE
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTY-TSALGGKIPIRWTAPEAIQ 213
Query: 264 HGYLSVKTDVFSYGVLVLEIVS 285
+ + +DV+SYG+++ E++S
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMS 235
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 94 LGHGGFGPVYRGLM--PNGQE--IAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+G G FG V RG + P +E +A+K L RQ REF +E ++ + +H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-RREFLSEASIMGQFEHPNIIRL 82
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G M++ E++ N +LD F+ + ++ G+A G+ YL E +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAEMS-- 138
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A NIL++ L K+SDFGL+R E+ + S G + APE
Sbjct: 139 -YVHRDLAARNILVNSNLVCKVSDFGLSRFL--EENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS 285
+ +D +SYG+++ E++S
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKNLV 145
F L +LG+G + VY+GL G +A+K++ +DS +G E+ L+ +++H+N+V
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS---LDWTTRYRIVMGVARGLLYLH 202
L+ + LV+E++ N L ++ +T ++ L+ + +GL + H
Sbjct: 67 RLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-GTHGYMAPEY 261
E +I+HRD+K N+L++++ K+ DFGLAR F VNTF T Y AP+
Sbjct: 126 EN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNTFSSEVVTLWYRAPDV 179
Query: 262 ALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
+ S D++S G ++ E+++G+ G +E+ L+
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
++ ++G G G VY + + GQE+A++++++ + NE+ ++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G E +V EYL SL D + +D + + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
++IHRDIK+ NILL + K++DFG E + +T + GT +MAPE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 192
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
K D++S G++ +E++ G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGE 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
++QLG G FG V Y L N G +AVK+L R+F E+++L K H + +
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFI 86
Query: 146 TLFGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ + GP + LV EYLP+ L F+ + + LD + + +G+ YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP-GEDTHVNTFRISGTHGYMAPEY 261
R +HRD+ A NIL++ + + KI+DFGLA+L P +D +V + APE
Sbjct: 145 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 262 ALHGYLSVKTDVFSYGVLVLEIVS 285
S ++DV+S+GV++ E+ +
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
++QLG G FG V Y L N G +AVK+L R+F E+++L K H + +
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFI 73
Query: 146 TLFGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ + GP + LV EYLP+ L F+ + + LD + + +G+ YL
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP-GEDTHVNTFRISGTHGYMAPEY 261
R +HRD+ A NIL++ + + KI+DFGLA+L P +D +V + APE
Sbjct: 132 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 262 ALHGYLSVKTDVFSYGVLVLEIVS 285
S ++DV+S+GV++ E+ +
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 91 LNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
++QLG G FG V Y L N G +AVK+L R+F E+++L K H + +
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFI 74
Query: 146 TLFGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+ + GP + LV EYLP+ L F+ + + LD + + +G+ YL
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP-GEDTHVNTFRISGTHGYMAPEY 261
R +HRD+ A NIL++ + + KI+DFGLA+L P +D +V + APE
Sbjct: 133 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 262 ALHGYLSVKTDVFSYGVLVLEIVS 285
S ++DV+S+GV++ E+ +
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 33/252 (13%)
Query: 91 LNQLGHGGFGPVYRGL-MPNGQEIAVK---KLSVDS--RQGLREFTNEVKLLLKIQHKNL 144
L LG G FG V++G+ +P G+ I + K+ D RQ + T+ + + + H ++
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG----------V 194
V L G C G LV +YLP SL LD ++R +G +
Sbjct: 96 VRLLGLCP-GSSLQLVTQYLPLGSL------------LDHVRQHRGALGPQLLLNWGVQI 142
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
A+G+ YL E ++HR++ A N+LL +++DFG+A L P +D +
Sbjct: 143 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEK 313
+MA E G + ++DV+SYGV V E+++ G + + G E DLL L Q +
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI 259
Query: 314 ALELVDPSLAKC 325
V + KC
Sbjct: 260 CTIDVYMVMVKC 271
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 33/252 (13%)
Query: 91 LNQLGHGGFGPVYRGL-MPNGQEIAVK---KLSVDS--RQGLREFTNEVKLLLKIQHKNL 144
L LG G FG V++G+ +P G+ I + K+ D RQ + T+ + + + H ++
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG----------V 194
V L G C G LV +YLP SL LD ++R +G +
Sbjct: 78 VRLLGLCP-GSSLQLVTQYLPLGSL------------LDHVRQHRGALGPQLLLNWGVQI 124
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
A+G+ YL E ++HR++ A N+LL +++DFG+A L P +D +
Sbjct: 125 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEK 313
+MA E G + ++DV+SYGV V E+++ G + + G E DLL L Q +
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI 241
Query: 314 ALELVDPSLAKC 325
V + KC
Sbjct: 242 CTIDVYMVMVKC 253
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 94 LGHGGFGPV-YRGLMPNGQE---IAVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G G V Y L GQ +A+K L + + R+F +E ++ + H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G G M+V EY+ N SLD F+ +T ++ GV G+ YL +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG--- 171
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRD+ A N+L+D L K+SDFGL+R+ ED + +G + APE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVL--EDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 266 YLSVKTDVFSYGVLVLEIVS 285
S +DV+S+GV++ E+++
Sbjct: 230 TFSSASDVWSFGVVMWEVLA 249
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 94 LGHGGFGPVYRGLM--PNGQE--IAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+G G FG V RG + P +E +A+K L RQ REF +E ++ + +H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASIMGQFEHPNIIRL 80
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G M++ E++ N +LD F+ + ++ G+A G+ YL E +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAEMS-- 136
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLF---PGEDTHVNTFRISGTHGYMAPEYALH 264
+HRD+ A NIL++ L K+SDFGL+R + T+ ++ + APE
Sbjct: 137 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 265 GYLSVKTDVFSYGVLVLEIVS 285
+ +D +SYG+++ E++S
Sbjct: 196 RKFTSASDAWSYGIVMWEVMS 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNG---QEIAVKKL-SVDSRQGLREFTNEVKLLLKI-QHK 142
F D+ +G G FG V + + + A+K++ S+ R+F E+++L K+ H
Sbjct: 26 FQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSL-DY------------FIFDKTKSSSLDWTTRYR 189
N++ L G C L EY P+ +L D+ F + +S+L
Sbjct: 84 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR 249
VARG+ YL ++ + IHR++ A NIL+ E KI+DFGL+R G++ +V
Sbjct: 144 FAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTM 197
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MA E + + +DV+SYGVL+ EIVS
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K+ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 211
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 22/247 (8%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCC 151
+LG G FG V+ ++AVK + S + F E ++ +QH LV L
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 152 AEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+ P ++ E++ SL D+ D+ L + +A G+ ++ + I
Sbjct: 80 TKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS--AQIAEGMAFIEQR---NYI 133
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALHG 265
HRD++A+NIL+ L KI+DFGLAR+ ED F I T APE G
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWT----APEAINFG 187
Query: 266 YLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAK 324
++K+DV+S+G+L++EIV+ GR + G E L + + + E E + + +
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR 247
Query: 325 C--NRDE 329
C NR E
Sbjct: 248 CWKNRPE 254
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K+ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 34/219 (15%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLF-- 148
L +G G +G VY+G + + + +AVK S +RQ N ++ L ++H N+
Sbjct: 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPL-MEHDNIARFIVG 75
Query: 149 --GCCAEGP-EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
A+G E +LV EY PN SL ++ T DW + R+ V RGL YLH E
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 206 P------ARIIHRDIKASNILLDEQLNPKISDFGLA------RLF-PGEDTHVNTFRISG 252
P I HRD+ + N+L+ ISDFGL+ RL PGE+ + + G
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-G 190
Query: 253 THGYMAPEYALHGYLSVK--------TDVFSYGVLVLEI 283
T YMAPE L G ++++ D+++ G++ EI
Sbjct: 191 TIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 22/247 (8%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCC 151
+LG G FG V+ ++AVK + S + F E ++ +QH LV L
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 152 AEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+ P ++ E++ SL D+ D+ L + +A G+ ++ + I
Sbjct: 253 TKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS--AQIAEGMAFIEQR---NYI 306
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT-----FRISGTHGYMAPEYALHG 265
HRD++A+NIL+ L KI+DFGLAR+ ED F I T APE G
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWT----APEAINFG 360
Query: 266 YLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAK 324
++K+DV+S+G+L++EIV+ GR + G E L + + + E E + + +
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR 420
Query: 325 C--NRDE 329
C NR E
Sbjct: 421 CWKNRPE 427
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 202
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG V G + P +EI A+K L + + R+F +E ++ + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G + M++ EY+ N SLD F+ + ++ G+ G+ YL + +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA-- 152
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRD+ A NIL++ L K+SDFG++R+ ED + G + APE +
Sbjct: 153 -VHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 266 YLSVKTDVFSYGVLVLEIVS 285
+ +DV+SYG+++ E++S
Sbjct: 210 KFTSASDVWSYGIVMWEVMS 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 211
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 227
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 31/220 (14%)
Query: 94 LGHGGFGPVYRGLM------PNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVT 146
LG G FG V + +AVK L + S LR+ +E +L ++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK-------------SSSLDWTTRYRIVMG 193
L+G C++ +L+ EY SL F+ + K SSSLD + MG
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 194 --------VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
+++G+ YL E +++HRD+ A NIL+ E KISDFGL+R ED++V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +MA E + ++DV+S+GVL+ EIV+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 217
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKL-SVDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 237
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
++ ++G G G VY + + GQE+A++++++ + NE+ ++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G E +V EYL SL D + +D + + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGL-ARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
++IHRDIK+ NILL + K++DFG A++ P + + GT +MAPE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPEVVTRK 191
Query: 266 YLSVKTDVFSYGVLVLEIVSGR 287
K D++S G++ +E++ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + + +R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG V G + P +EI A+K L + + R+F +E ++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G + M++ EY+ N SLD F+ + ++ G+ G+ YL + +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQLVGMLRGIGSGMKYLSDMS--- 130
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRD+ A NIL++ L K+SDFG++R+ ED + G + APE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 266 YLSVKTDVFSYGVLVLEIVS 285
+ +DV+SYG+++ E++S
Sbjct: 189 KFTSASDVWSYGIVMWEVMS 208
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 94 LGHGGFGPVYRGLMPN-GQEIAVKKLSV---------DSRQGLREFTNEVKLLLKI-QHK 142
LG G FG V G+E AV K++V D ++ L +E+K++ + QH+
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIMSHLGQHE 102
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------FDKTKSSSLDWTTRYRIVMGVA 195
N+V L G C G +++ EY L F+ DK L+ VA
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 196 RGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG 255
+G+ +L A IHRD+ A N+LL KI DFGLAR + ++
Sbjct: 163 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE +V++DV+SYG+L+ EI S
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 94 LGHGGFGPV-YRGLMPNGQE---IAVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G G V Y L GQ +A+K L + + R+F +E ++ + H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G G M+V EY+ N SLD F+ +T ++ GV G+ YL +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG--- 171
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGE-DTHVNTFRISGTHGYMAPEYALHGYL 267
+HRD+ A N+L+D L K+SDFGL+R+ + D T + APE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 268 SVKTDVFSYGVLVLEIVS 285
S +DV+S+GV++ E+++
Sbjct: 232 SSASDVWSFGVVMWEVLA 249
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG V G + P +EI A+K L + + R+F +E ++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G + M++ EY+ N SLD F+ + ++ G+ G+ YL + +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQLVGMLRGIGSGMKYLSDMS--- 136
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRD+ A NIL++ L K+SDFG++R+ ED + G + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 266 YLSVKTDVFSYGVLVLEIVS 285
+ +DV+SYG+++ E++S
Sbjct: 195 KFTSASDVWSYGIVMWEVMS 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + +R G
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVK 228
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
++ ++G G G VY + + GQE+A++++++ + NE+ ++ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G E +V EYL SL D + +D + + L +LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
++IHR+IK+ NILL + K++DFG E + +T + GT +MAPE
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 193
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
K D++S G++ +E++ G
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGE 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 94 LGHGGFGPVYRGLMPN-GQEIAVKKLSV---------DSRQGLREFTNEVKLLLKI-QHK 142
LG G FG V G+E AV K++V D ++ L +E+K++ + QH+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIMSHLGQHE 110
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------FDKTKSSSLDWTTRYRIVMGVA 195
N+V L G C G +++ EY L F+ DK L+ VA
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 196 RGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG 255
+G+ +L A IHRD+ A N+LL KI DFGLAR + ++
Sbjct: 171 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE +V++DV+SYG+L+ EI S
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+AR + +R G
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVK 251
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
++ ++G G G VY + + GQE+A++++++ + NE+ ++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G E +V EYL SL D + +D + + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
++IHRDIK+ NILL + K++DFG E + + + GT +MAPE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKA 192
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
K D++S G++ +E++ G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
++ ++G G G VY + + GQE+A++++++ + NE+ ++ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G E +V EYL SL D + +D + + L +LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
++IHRDIK+ NILL + K++DFG E + + + GT +MAPE
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKA 193
Query: 267 LSVKTDVFSYGVLVLEIVSGR 287
K D++S G++ +E++ G
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGE 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 17/202 (8%)
Query: 94 LGHGGFGPVYRG--LMPNGQEI--AVKKL-SVDSRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG V G +P +EI A+K L S + + R+F +E ++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G + M++ E++ N SLD F+ + ++ G+A G+ YL A
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 129
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYAL 263
+HR + A NIL++ L K+SDFGL+R F +DT T+ S G + APE
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTY-TSALGGKIPIRWTAPEAIQ 187
Query: 264 HGYLSVKTDVFSYGVLVLEIVS 285
+ + +DV+SYG+++ E++S
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 94 LGHGGFGPVYRGLM------PNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVT 146
LG G FG V + +AVK L + S LR+ +E +L ++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK-------------SSSLDWTTRYRIVMG 193
L+G C++ +L+ EY SL F+ + K SSSLD + MG
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 194 --------VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
+++G+ YL E +++HRD+ A NIL+ E KISDFGL+R ED+ V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +MA E + ++DV+S+GVL+ EIV+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCC 151
+LG G FG V+ ++AVK + S + F E ++ +QH LV L
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 152 AEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+ P ++ E++ SL D+ D+ L + +A G+ ++ + I
Sbjct: 247 TKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS--AQIAEGMAFIEQR---NYI 300
Query: 211 HRDIKASNILLDEQLNPKISDFGLARL---FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
HRD++A+NIL+ L KI+DFGLAR+ FP + + APE G
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAKFPIK--------------WTAPEAINFGSF 346
Query: 268 SVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPSLAKC- 325
++K+DV+S+G+L++EIV+ GR + G E L + + + E E + + +C
Sbjct: 347 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCW 406
Query: 326 -NRDE 329
NR E
Sbjct: 407 KNRPE 411
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 92 NQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLVTLFG 149
Q+G G FG V+ G L + +AVK L+ +F E ++L + H N+V L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C + +V E + + D+ F +T+ + L T ++V A G+ YL +
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG-----THGYMAPEYALH 264
IHRD+ A N L+ E+ KISDFG++R + + SG + APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 265 GYLSVKTDVFSYGVLVLEIVS 285
G S ++DV+S+G+L+ E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 94 LGHGGFGPVYRGL---MPNGQ---EIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVT 146
LGHG FG VY G MPN ++AVK L V S Q +F E ++ K H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGLLYLH 202
G + + ++ E + L F+ + ++ SSL + +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 203 EEAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTH----G 255
E IHRDI A N LL KI DFG+A+ + + +R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----DIYRASYYRKGGCAMLPVK 211
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+M PE + G + KTD +S+GVL+ EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 81 LQVATNFFSDLNQ----LGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNE 132
+Q +T FSD + LG G FG V GQE AVK +S V + E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 133 VKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVM 192
V+LL ++ H N++ L+ + LV E L I + + S +D RI+
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIR 156
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFR 249
V G+ Y+H+ +I+HRD+K N+LL+ + N +I DFGL+ F +
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI- 212
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT Y+APE LHG K DV+S GV++ ++SG
Sbjct: 213 --GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 114/210 (54%), Gaps = 13/210 (6%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLK 138
+++ + F +++LG G G V++ P+G +A K + ++ + +R + E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
+V +G E + E++ SLD + K+ + ++ + V +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYM 257
YL E+ +I+HRD+K SNIL++ + K+ DFG++ +L D+ N+F GT YM
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSF--VGTRSYM 170
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
+PE + SV++D++S G+ ++E+ GR
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 94 LGHGGFGPVYRGLM------PNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKIQHKNLVT 146
LG G FG V + +AVK L + S LR+ +E +L ++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK-------------SSSLDWTTRYRIVMG 193
L+G C++ +L+ EY SL F+ + K SSSLD + MG
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 194 --------VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
+++G+ YL E + ++HRD+ A NIL+ E KISDFGL+R ED+ V
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +MA E + ++DV+S+GVL+ EIV+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 81 LQVATNFFSDLNQ----LGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNE 132
+Q +T FSD + LG G FG V GQE AVK +S V + E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 133 VKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVM 192
V+LL ++ H N++ L+ + LV E L I + + S +D RI+
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIR 157
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFR 249
V G+ Y+H+ +I+HRD+K N+LL+ + N +I DFGL+ F +
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI- 213
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT Y+APE LHG K DV+S GV++ ++SG
Sbjct: 214 --GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 94 LGHGGFGPVYRGLMPN-GQEIAVKKLSV---------DSRQGLREFTNEVKLLLKI-QHK 142
LG G FG V G+E AV K++V D ++ L +E+K++ + QH+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIMSHLGQHE 110
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK-----------SSSLDWTTRYRIV 191
N+V L G C G +++ EY L F+ K++ +S+L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A IHRD+ A N+LL KI DFGLAR + ++
Sbjct: 171 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE +V++DV+SYG+L+ EI S
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 92 NQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCC 151
++G G FG VY+G + + K+ + + + F NEV +L K +H N++ G
Sbjct: 42 TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 152 AEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+ +V ++ SL + +TK I A+G+ YLH + II
Sbjct: 102 TKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLID---IARQTAQGMDYLHAK---NII 154
Query: 211 HRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL---HGYL 267
HRD+K++NI L E L KI DFGLA + + +G+ +MAPE +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 268 SVKTDVFSYGVLVLEIVSG 286
S ++DV+SYG+++ E+++G
Sbjct: 215 SFQSDVYSYGIVLYELMTG 233
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 112/209 (53%), Gaps = 11/209 (5%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLK 138
+++ + F +++LG G G V++ P+G +A K + ++ + +R + E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
+V +G E + E++ SLD + K+ + ++ + V +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
YL E+ +I+HRD+K SNIL++ + K+ DFG++ D+ N+F GT YM+
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGTRSYMS 171
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
PE + SV++D++S G+ ++E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 112/209 (53%), Gaps = 11/209 (5%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLK 138
+++ + F +++LG G G V++ P+G +A K + ++ + +R + E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
+V +G E + E++ SLD + K+ + ++ + V +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
YL E+ +I+HRD+K SNIL++ + K+ DFG++ D+ N+F GT YM+
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF--VGTRSYMS 171
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
PE + SV++D++S G+ ++E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 112/209 (53%), Gaps = 11/209 (5%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLK 138
+++ + F +++LG G G V++ P+G +A K + ++ + +R + E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
+V +G E + E++ SLD + K+ + ++ + V +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
YL E+ +I+HRD+K SNIL++ + K+ DFG++ D+ N+F GT YM+
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF--VGTRSYMS 171
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
PE + SV++D++S G+ ++E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Query: 88 FSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLV 145
F +++LG G G V++ P+G +A K + ++ + +R + E+++L + +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+G E + E++ SLD + K+ + ++ + V +GL YL E+
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+I+HRD+K SNIL++ + K+ DFG++ +L D+ N+F GT YM+PE
Sbjct: 187 --KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSF--VGTRSYMSPERLQG 239
Query: 265 GYLSVKTDVFSYGVLVLEIVSGR 287
+ SV++D++S G+ ++E+ GR
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 81 LQVATNFFSDLNQ----LGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNE 132
+Q +T FSD + LG G FG V GQE AVK +S V + E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 133 VKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVM 192
V+LL ++ H N++ L+ + LV E L I + + S +D RI+
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIR 133
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFR 249
V G+ Y+H+ +I+HRD+K N+LL+ + N +I DFGL+ F +
Sbjct: 134 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI- 189
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT Y+APE LHG K DV+S GV++ ++SG
Sbjct: 190 --GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 108/202 (53%), Gaps = 11/202 (5%)
Query: 88 FSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLV 145
F +++LG G G V++ P+G +A K + ++ + +R + E+++L + +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+G E + E++ SLD + K+ + ++ + V +GL YL E+
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
+I+HRD+K SNIL++ + K+ DFG++ D+ N+F GT YM+PE
Sbjct: 144 --KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF--VGTRSYMSPERLQGT 197
Query: 266 YLSVKTDVFSYGVLVLEIVSGR 287
+ SV++D++S G+ ++E+ GR
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 114/210 (54%), Gaps = 13/210 (6%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLK 138
+++ + F +++LG G G V++ P+G +A K + ++ + +R + E+++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
+V +G E + E++ SLD + K+ + ++ + V +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYM 257
YL E+ +I+HRD+K SNIL++ + K+ DFG++ +L D+ N+F GT YM
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSF--VGTRSYM 170
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
+PE + SV++D++S G+ ++E+ GR
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 94 LGHGGFGPVYRGLMPN-GQEIAVKKLSV---------DSRQGLREFTNEVKLLLKI-QHK 142
LG G FG V G+E AV K++V D ++ L +E+K++ + QH+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIMSHLGQHE 110
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVA--RGLLY 200
N+V L G C G +++ EY L F+ + KS L+ + I A R LL+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 201 LHEE--------APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+ A IHRD+ A N+LL KI DFGLAR + ++
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE +V++DV+SYG+L+ EI S
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 97 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 150
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 266 YEVMLKCWHPKAEM 279
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Query: 88 FSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLV 145
F +++LG G G V++ P+G +A K + ++ + +R + E+++L + +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+G E + E++ SLD + K+ + ++ + V +GL YL E+
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+I+HRD+K SNIL++ + K+ DFG++ +L D+ N+F GT YM+PE
Sbjct: 152 --KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSF--VGTRSYMSPERLQG 204
Query: 265 GYLSVKTDVFSYGVLVLEIVSGR 287
+ SV++D++S G+ ++E+ GR
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 43/275 (15%)
Query: 91 LNQLGHGGFGPVYRGLM--PNGQ--EIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
L +LG G FG V RG P+G+ +AVK L D + + +F EV + + H+N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT--TRYRIVMGVARGLLYL 201
L+ L+G P KM V E P SL D+ + + T R + VA G+ YL
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH-VNTFRISGTHGYMAPE 260
+ R IHRD+ A N+LL + KI DFGL R P D H V + APE
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD- 319
S +D + +GV + E+ + G+E W G + L +D
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT--------YGQE-------PWIGLNGSQILHKIDK 239
Query: 320 -----PSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
P C +D + +Q C +RP
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQ----CWAHKPEDRP 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 108 PNGQEIAVKKLSVDSRQ-GLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPN 166
P +++A+K+++++ Q + E E++ + + H N+V+ + E LV + L
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 167 KSLDYFIFD-----KTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILL 221
S+ I + KS LD +T I+ V GL YLH+ IHRD+KA NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 222 DEQLNPKISDFGL-ARLFPGEDTHVNTFRIS--GTHGYMAPEY--ALHGYLSVKTDVFSY 276
E + +I+DFG+ A L G D N R + GT +MAPE + GY K D++S+
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSF 213
Query: 277 GVLVLEIVSG 286
G+ +E+ +G
Sbjct: 214 GITAIELATG 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 108 PNGQEIAVKKLSVDSRQ-GLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPN 166
P +++A+K+++++ Q + E E++ + + H N+V+ + E LV + L
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 167 KSLDYFIFD-----KTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILL 221
S+ I + KS LD +T I+ V GL YLH+ IHRD+KA NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 222 DEQLNPKISDFGL-ARLFPGEDTHVNTFRIS--GTHGYMAPEY--ALHGYLSVKTDVFSY 276
E + +I+DFG+ A L G D N R + GT +MAPE + GY K D++S+
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSF 208
Query: 277 GVLVLEIVSG 286
G+ +E+ +G
Sbjct: 209 GITAIELATG 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 43/275 (15%)
Query: 91 LNQLGHGGFGPVYRGLM--PNGQ--EIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
L +LG G FG V RG P+G+ +AVK L D + + +F EV + + H+N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT--TRYRIVMGVARGLLYL 201
L+ L+G P KM V E P SL D+ + + T R + VA G+ YL
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH-VNTFRISGTHGYMAPE 260
+ R IHRD+ A N+LL + KI DFGL R P D H V + APE
Sbjct: 138 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD- 319
S +D + +GV + E+ + G+E W G + L +D
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT--------YGQE-------PWIGLNGSQILHKIDK 239
Query: 320 -----PSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
P C +D + +Q C +RP
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQ----CWAHKPEDRP 270
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 92 NQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLVTLFG 149
Q+G G FG V+ G L + +AVK L+ +F E ++L + H N+V L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
C + +V E + + D+ F +T+ + L T ++V A G+ YL +
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+ A N L+ E+ KISDFG++R + + APE +G S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 270 KTDVFSYGVLVLEIVS 285
++DV+S+G+L+ E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 81 LQVATNFFSDLNQ----LGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNE 132
+Q +T FSD + LG G FG V GQE AVK +S V + E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 133 VKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVM 192
V+LL ++ H N++ L+ + LV E L I + + S +D RI+
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIR 139
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFR 249
V G+ Y+H+ +I+HRD+K N+LL+ + N +I DFGL+ F +
Sbjct: 140 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI- 195
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT Y+APE LHG K DV+S GV++ ++SG
Sbjct: 196 --GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 43/275 (15%)
Query: 91 LNQLGHGGFGPVYRGLM--PNGQ--EIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
L +LG G FG V RG P+G+ +AVK L D + + +F EV + + H+N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT--TRYRIVMGVARGLLYL 201
L+ L+G P KM V E P SL D+ + + T R + VA G+ YL
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH-VNTFRISGTHGYMAPE 260
+ R IHRD+ A N+LL + KI DFGL R P D H V + APE
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD- 319
S +D + +GV + E+ + G+E W G + L +D
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT--------YGQEP-------WIGLNGSQILHKIDK 233
Query: 320 -----PSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
P C +D + +Q C +RP
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQ----CWAHKPEDRP 264
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 43/275 (15%)
Query: 91 LNQLGHGGFGPVYRGLM--PNGQ--EIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
L +LG G FG V RG P+G+ +AVK L D + + +F EV + + H+N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT--TRYRIVMGVARGLLYL 201
L+ L+G P KM V E P SL D+ + + T R + VA G+ YL
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH-VNTFRISGTHGYMAPE 260
+ R IHRD+ A N+LL + KI DFGL R P D H V + APE
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD- 319
S +D + +GV + E+ + G+E W G + L +D
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT--------YGQE-------PWIGLNGSQILHKIDK 229
Query: 320 -----PSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
P C +D + +Q C +RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQ----CWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 43/275 (15%)
Query: 91 LNQLGHGGFGPVYRGLM--PNGQ--EIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
L +LG G FG V RG P+G+ +AVK L D + + +F EV + + H+N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT--TRYRIVMGVARGLLYL 201
L+ L+G P KM V E P SL D+ + + T R + VA G+ YL
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH-VNTFRISGTHGYMAPE 260
+ R IHRD+ A N+LL + KI DFGL R P D H V + APE
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD- 319
S +D + +GV + E+ + G+E W G + L +D
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT--------YGQE-------PWIGLNGSQILHKIDK 233
Query: 320 -----PSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
P C +D + +Q C +RP
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQ----CWAHKPEDRP 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 43/275 (15%)
Query: 91 LNQLGHGGFGPVYRGLM--PNGQ--EIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
L +LG G FG V RG P+G+ +AVK L D + + +F EV + + H+N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT--TRYRIVMGVARGLLYL 201
L+ L+G P KM V E P SL D+ + + T R + VA G+ YL
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH-VNTFRISGTHGYMAPE 260
+ R IHRD+ A N+LL + KI DFGL R P D H V + APE
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD- 319
S +D + +GV + E+ + G+E W G + L +D
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT--------YGQE-------PWIGLNGSQILHKIDK 229
Query: 320 -----PSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
P C +D + +Q C +RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQ----CWAHKPEDRP 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 76 FDLRTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVK 134
DL L+ F + +G+G +G VY+G + GQ A+K + V + E E+
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEIN 72
Query: 135 LLLKI-QHKNLVTLFGC-CAEGPEKM-----LVYEYLPNKSLDYFIFDKTKSSSLDWTTR 187
+L K H+N+ T +G + P M LV E+ S+ I + TK ++L
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWI 131
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I + RGL +LH+ ++IHRDIK N+LL E K+ DFG++ NT
Sbjct: 132 AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 188
Query: 248 FRISGTHGYMAPEYAL-----HGYLSVKTDVFSYGVLVLEIVSG 286
F GT +MAPE K+D++S G+ +E+ G
Sbjct: 189 F--IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 116/275 (42%), Gaps = 43/275 (15%)
Query: 91 LNQLGHGGFGPVYRGLM--PNGQ--EIAVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
L +LG G FG V RG P+G+ +AVK L D + + +F EV + + H+N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT--TRYRIVMGVARGLLYL 201
L+ L+G P KM V E P SL D+ + + T R + VA G+ YL
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH-VNTFRISGTHGYMAPE 260
+ R IHRD+ A N+LL + KI DFGL R P D H V + APE
Sbjct: 128 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD- 319
S +D + +GV + E+ + G+E W G + L +D
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT--------YGQE-------PWIGLNGSQILHKIDK 229
Query: 320 -----PSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
P C +D + +Q C +RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQ----CWAHKPEDRP 260
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 204 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 91 LNQLGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+A+K +D Q L++ EV+++ + H N+
Sbjct: 17 LKTIGKGNFAKVKLARHIL-TGREVAIK--IIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF L+ EY + ++ + + +++R ++ + Y H++
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQK 130
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE-YAL 263
RI+HRD+KA N+LLD +N KI+DFG + F ++TF G+ Y APE +
Sbjct: 131 ---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTF--CGSPPYAAPELFQG 184
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 185 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 218
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 117 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 170
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 231 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 285
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 286 YEVMLKCWHPKAEM 299
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 116 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 169
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 230 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 284
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 285 YEVMLKCWHPKAEM 298
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 96 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 149
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 265 YEVMLKCWHPKAEM 278
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 204 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 205 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 90 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 143
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 204 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 258
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 259 YEVMLKCWHPKAEM 272
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 198 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 198 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 205 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 95 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 148
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 209 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 263
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 264 YEVMLKCWHPKAEM 277
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 148
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 149 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 206 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 139
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 140 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 197 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 204 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNL 144
+ ++ ++G G G V + G+++AVKK+ + +Q NEV ++ H N+
Sbjct: 45 EYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNV 104
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V ++ G E +V E+L +L D + ++ + + V R L YLH +
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ 160
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+IHRDIK+ +ILL K+SDFG E + GT +MAPE
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX--LVGTPYWMAPEVISR 215
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
+ D++S G++V+E++ G
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 83 VATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSV-DSRQGLREFT-NEVKLLLKI 139
+AT+ + + ++G G +G VY+ P +G +A+K + V + +GL T EV LL ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 140 Q---HKNLVTLFGCCAEGP-----EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+ H N+V L CA + LV+E++ Y DK L T ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
RGL +LH I+HRD+K NIL+ K++DFGLAR++ + F +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVV 172
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEI 283
T Y APE L + D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 98 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 151
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 267 YEVMLKCWHPKAEM 280
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 98 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 151
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 267 YEVMLKCWHPKAEM 280
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 81 LQVATNFFSDLNQ----LGHGGFGPVYRGLMP-NGQEIAVKKLS---VDSRQGLREFTNE 132
+Q +T FSD + LG G FG V GQE AVK +S V + E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 133 VKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVM 192
V+LL ++ H N+ L+ + LV E L I + + S +D RI+
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIR 133
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFR 249
V G+ Y H+ +I+HRD+K N+LL+ + N +I DFGL+ F +
Sbjct: 134 QVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI- 189
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT Y+APE LHG K DV+S GV++ ++SG
Sbjct: 190 --GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 97 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 150
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 266 YEVMLKCWHPKAEM 279
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ +L A
Sbjct: 103 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 156
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGE-DTHVNTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E D+ N +MA E
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 217 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 271
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 272 YEVMLKCWHPKAEM 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ YL A
Sbjct: 93 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 146
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHV-NTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E V N +MA E
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 207 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 261
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 262 YEVMLKCWHPKAEM 275
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 204 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ +L A
Sbjct: 157 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 210
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGE-DTHVNTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E D+ N +MA E
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 271 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 325
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 326 YEVMLKCWHPKAEM 339
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + NT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ +L A
Sbjct: 96 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 149
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGE-DTHVNTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E D+ N +MA E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 265 YEVMLKCWHPKAEM 278
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 88 FSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLV 145
F +++LG G G V++ P+G +A K + ++ + +R + E+++L + +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+G E + E++ SLD + K+ + ++ + V +GL YL E+
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
+I+HRD+K SNIL++ + K+ DFG++ D N F GT YM+PE
Sbjct: 128 --KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DEMANEF--VGTRSYMSPERLQGT 181
Query: 266 YLSVKTDVFSYGVLVLEIVSGR 287
+ SV++D++S G+ ++E+ GR
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ +L A
Sbjct: 98 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 151
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGE-DTHVNTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E D+ N +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 267 YEVMLKCWHPKAEM 280
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ +L A
Sbjct: 99 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 152
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGE-DTHVNTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E D+ N +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 267
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 268 YEVMLKCWHPKAEM 281
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ +L A
Sbjct: 98 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 151
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGE-DTHVNTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR ++ E D+ N +MA E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 267 YEVMLKCWHPKAEM 280
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K L + + RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS 146
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 204 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++TL G C + ++ EY +L ++ ++ + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 151 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 208 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 239
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 200 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 30/268 (11%)
Query: 76 FDLRTL---QVATNFFSDLNQ---LGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLRE 128
FD R + Q A N F +++ LG G FG V++ G ++A K + + E
Sbjct: 73 FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE 132
Query: 129 FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRY 188
NE+ ++ ++ H NL+ L+ + +LV EY+ L FD+ S + T
Sbjct: 133 VKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL----FDRIIDESYNLTELD 188
Query: 189 RIVM--GVARGLLYLHEEAPARIIHRDIKASNILL--DEQLNPKISDFGLARLF-PGEDT 243
I+ + G+ ++H+ I+H D+K NIL + KI DFGLAR + P E
Sbjct: 189 TILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245
Query: 244 HVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK-ADLL 302
VN GT ++APE + ++S TD++S GV+ ++SG G E ++L
Sbjct: 246 KVNF----GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301
Query: 303 SYTWTL----FQ--GEKALELVDPSLAK 324
+ W L FQ E+A E + L K
Sbjct: 302 ACRWDLEDEEFQDISEEAKEFISKLLIK 329
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y L N +A++K+S Q + T E+K+LL+ +H+N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 204 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 202 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 163 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 220 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 91 LNQLGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQ---GLREFTNEVKLLLKIQHKNLV 145
+++LG GG VY + N + +A+K + + R+ L+ F EV ++ H+N+V
Sbjct: 16 VDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
++ E LV EY+ +L +I L T + G+ + H+
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD-- 129
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
RI+HRDIK NIL+D KI DFG+A+ E + T + GT Y +PE A
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 266 YLSVKTDVFSYGVLVLEIVSGRKNHDGRLG 295
TD++S G+++ E++ G +G
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNGETA 217
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 200 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 26/254 (10%)
Query: 94 LGHGGFGPVYRGLM--PNGQEI--AVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G + +G++I AVK L+ + G + +F E ++ H N+++L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 149 GCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
G C +EG ++V Y+ + L FI ++T + ++ + + VA+G+ +L A
Sbjct: 99 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 152
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMAPEYALH 264
+ +HRD+ A N +LDE+ K++DFGLAR L D+ N +MA E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 265 GYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALE---LVDP- 320
+ K+DV+S+GVL+ E+++ G + T L QG + L+ DP
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 267
Query: 321 --SLAKCNRDEAAM 332
+ KC +A M
Sbjct: 268 YEVMLKCWHPKAEM 281
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 19/214 (8%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+AVK +D Q L++ EV+++ + H N+
Sbjct: 19 LKTIGKGNFAKVKLARHIL-TGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF LV EY + ++ + + ++R ++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK 132
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE-YAL 263
I+HRD+KA N+LLD +N KI+DFG + F + ++TF G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTF--CGSPPYAAPELFQG 186
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 98/223 (43%), Gaps = 37/223 (16%)
Query: 94 LGHGGFGPVYRGLMPN-GQEIAVKKLSV---------DSRQGLREFTNEVKLLLKI-QHK 142
LG G FG V G+E AV K++V D ++ L +E+K++ + QH+
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIMSHLGQHE 95
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFI--------------------FDKTKSSSL 182
N+V L G C G +++ EY L F+ DK L
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
+ VA+G+ +L A IHRD+ A N+LL KI DFGLAR +
Sbjct: 156 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 243 THVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
++ +MAPE +V++DV+SYG+L+ EI S
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 19/214 (8%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+AVK +D Q L++ EV+++ + H N+
Sbjct: 19 LKTIGKGNFAKVKLARHIL-TGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF LV EY + ++ + + ++R ++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK 132
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE-YAL 263
I+HRD+KA N+LLD +N KI+DFG + F + ++TF G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTF--CGSPPYAAPELFQG 186
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 87 FFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSR-QGLREFTNEVKLLLKIQ 140
F + LG G FG V Y N G+++AVK L +S + + E+++L +
Sbjct: 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 81
Query: 141 HKNLVTLFGCCAE--GPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H+N+V G C E G L+ E+LP+ SL ++ +L +Y + + +G+
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV--QICKGM 139
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP--GEDTHVNTFRISGTHGY 256
YL + +HRD+ A N+L++ + KI DFGL + E V R S Y
Sbjct: 140 DYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 196
Query: 257 MAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
APE + + +DV+S+GV + E+++
Sbjct: 197 -APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 13/203 (6%)
Query: 88 FSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLV 145
F +++LG G G V + P+G +A K + ++ + +R + E+++L + +V
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+G E + E++ SLD + ++ + ++ + V RGL YL E+
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+I+HRD+K SNIL++ + K+ DFG++ +L D+ N+F GT YMAPE
Sbjct: 135 --QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSF--VGTRSYMAPERLQG 187
Query: 265 GYLSVKTDVFSYGVLVLEIVSGR 287
+ SV++D++S G+ ++E+ GR
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGR 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 200 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 87 FFSDLNQLGHGGFGPV----YRGLMPN-GQEIAVKKLSVDSR-QGLREFTNEVKLLLKIQ 140
F + LG G FG V Y N G+++AVK L +S + + E+++L +
Sbjct: 10 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 69
Query: 141 HKNLVTLFGCCAE--GPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
H+N+V G C E G L+ E+LP+ SL ++ +L +Y + + +G+
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV--QICKGM 127
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP--GEDTHVNTFRISGTHGY 256
YL + +HRD+ A N+L++ + KI DFGL + E V R S Y
Sbjct: 128 DYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 184
Query: 257 MAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
APE + + +DV+S+GV + E+++
Sbjct: 185 -APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL- 263
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPG 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 200 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL- 263
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 144 LVTLFGCC-AEGPEKML-VYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
++ + A E+M VY D + KT+ S D + + + RGL Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF--LYQILRGLKYI 160
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPE 260
H A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 161 HS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 261 YALH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 218 IMLNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL+ +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 200 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+A+K +D Q L++ EV+++ + H N+
Sbjct: 20 LKTIGKGNFAKVKLARHIL-TGREVAIK--IIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF L+ EY + ++ + + +++R ++ + Y H++
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQK 133
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE-YAL 263
RI+HRD+KA N+LLD +N KI+DFG + F ++ F G Y APE +
Sbjct: 134 ---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAF--CGAPPYAAPELFQG 187
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 146 TLFGCCAE--GPEKMLV--------YEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV---M 192
L G C + GP ++V YL +K ++ + + D+ T ++
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + V
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL +H+N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 202 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 178
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCA 152
LG G +G VY G + N IA+K++ + + E+ L ++HKN+V G +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 153 EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHR 212
E + E +P SL + K + T + GL YLH+ +I+HR
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 146
Query: 213 DIKASNILLDEQLNP-KISDFGLARLFPGEDTHVNTFRISGTHGYMAPEY---ALHGYLS 268
DIK N+L++ KISDFG ++ G + TF +GT YMAPE GY
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGY-G 203
Query: 269 VKTDVFSYGVLVLEIVSGR 287
D++S G ++E+ +G+
Sbjct: 204 KAADIWSLGCTIIEMATGK 222
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 181
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSLDYFI------FDKTKSSSLDWTTRYRIV---MGVA 195
L G C + G M++ E+ +L ++ F K D+ T ++ VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 196 RGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG 255
+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 19/214 (8%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+AV+ +D Q L++ EV+++ + H N+
Sbjct: 19 LKTIGKGNFAKVKLARHIL-TGKEVAVR--IIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF LV EY + ++ + + ++R ++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK 132
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE-YAL 263
I+HRD+KA N+LLD +N KI+DFG + F + ++TF G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTF--CGSPPYAAPELFQG 186
Query: 264 HGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNLV 145
+ L ++G G +G VY+ G+ A+KK+ ++ +G+ T E+ +L +++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 146 TLFGCCAEGPEKMLVYEYLPN---KSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
L+ +LV+E+L K LD L+ T ++ + G+ Y H
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD------VCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+ R++HRD+K N+L++ + KI+DFGLAR F G T I T Y AP+
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDVL 172
Query: 263 L-HGYLSVKTDVFSYGVLVLEIVSG 286
+ S D++S G + E+V+G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKNLV 145
++ L +G G +G V +A+KK+S Q + T E+++LL+ +H+N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+ + + Y+ ++ ++ KS L + + RGL Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS-- 162
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYALH 264
A ++HRD+K SN+L++ + KI DFGLAR+ E H T Y APE L+
Sbjct: 163 -ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 265 --GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
GY + D++S G ++ E++S R G+
Sbjct: 222 SKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 28/230 (12%)
Query: 67 SGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPN-GQEIAVKKL--SVD 121
SG D + NL+F + + +L +G G +G V + + G+ +A+KK S D
Sbjct: 10 SGVDLGTENLYFQ------SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD 63
Query: 122 SRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS 181
+ + E+KLL +++H+NLV L C + LV+E++ + LD + +
Sbjct: 64 DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL---ELFPNG 120
Query: 182 LDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF--P 239
LD+ + + + G+ + H IIHRDIK NIL+ + K+ DFG AR P
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177
Query: 240 GE--DTHVNTFRISGTHGYMAPEYALHGYLSVK-TDVFSYGVLVLEIVSG 286
GE D V T Y APE + K DV++ G LV E+ G
Sbjct: 178 GEVYDDEV------ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCA 152
LG G +G VY G + N IA+K++ + + E+ L ++HKN+V G +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 153 EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHR 212
E + E +P SL + K + T + GL YLH+ +I+HR
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 132
Query: 213 DIKASNILLDEQLNP-KISDFGLARLFPGEDTHVNTFRISGTHGYMAPEY---ALHGYLS 268
DIK N+L++ KISDFG ++ G + TF +GT YMAPE GY
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGY-G 189
Query: 269 VKTDVFSYGVLVLEIVSGR 287
D++S G ++E+ +G+
Sbjct: 190 KAADIWSLGCTIIEMATGK 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSLDYFI------FDKTKSSSLDWTTRYRIV---MGVA 195
L G C + G M++ E+ +L ++ F K D+ T ++ VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 196 RGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG 255
+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+AVK +D Q L++ EV+++ + H N+
Sbjct: 12 LKTIGKGNFAKVKLARHIL-TGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 145 VTLFGCCAEGPEKMLVYEYLPN-KSLDYFI---FDKTKSSSLDWTTRYRIVMGVARGLLY 200
V LF LV EY + DY + + K K + ++R ++ + Y
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR----AKFRQIVSAVQ---Y 121
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
H++ I+HRD+KA N+LLD +N KI+DFG + F + ++TF G+ Y APE
Sbjct: 122 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTF--CGSPPYAAPE 175
Query: 261 -YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ Y + DV+S GV++ +VSG DG+ KE
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+AV+ +D Q L++ EV+++ + H N+
Sbjct: 19 LKTIGKGNFAKVKLARHIL-TGKEVAVR--IIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF LV EY + ++ + + ++R ++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK 132
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPE-YA 262
I+HRD+KA N+LLD +N KI+DFG F E T N G+ Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDEFCGSPPYAAPELFQ 185
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 86 NFFSDLNQLGHGGFGPV-YRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNL 144
++ + ++G G G V + +G+ +AVKK+ + +Q NEV ++ QH+N+
Sbjct: 20 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V ++ G E +V E+L +L D + ++ + + V + L LH +
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+IHRDIK+ +ILL K+SDFG E + GT +MAPE
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 190
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
+ D++S G++V+E+V G
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDG 212
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+AVK +D Q L++ EV+++ + H N+
Sbjct: 19 LKTIGKGNFAKVKLARHIL-TGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF LV EY + ++ + + ++R ++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQK 132
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPE-YA 262
I+HRD+KA N+LLD +N KI+DFG F E T N G Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 86 NFFSDLNQLGHGGFGPV-YRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNL 144
++ + ++G G G V + +G+ +AVKK+ + +Q NEV ++ QH+N+
Sbjct: 24 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V ++ G E +V E+L +L D + ++ + + V + L LH +
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+IHRDIK+ +ILL K+SDFG E + GT +MAPE
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 194
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
+ D++S G++V+E+V G
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAE-GPEKMLVY--------EYL-----PNKSLDYFIFDKTKSSSLDWTTRYR 189
++ L G C + GP ++V EYL P Y I ++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDI-NRVPEEQMTFKDLVS 161
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR 249
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSL-DY----------FIFDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L +Y F F+ + + +++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLSVDSRQGLREFT-NEVKLLLKIQHKN 143
+++L+ +G G +G V Y + N +A+KK+S Q + T E+K+LL +H+N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ + + + Y+ ++ ++ K+ L + + RGL Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
A ++HRD+K SN+LL+ + KI DFGLAR+ + H T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 263 LH--GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
L+ GY + D++S G ++ E++S R G+
Sbjct: 202 LNSKGY-TKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNLV 145
+ L ++G G +G VY+ G+ A+KK+ ++ +G+ T E+ +L +++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 146 TLFGCCAEGPEKMLVYEYLPN---KSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
L+ +LV+E+L K LD L+ T ++ + G+ Y H
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD------VCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+ R++HRD+K N+L++ + KI+DFGLAR F G T + T Y AP+
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVL 172
Query: 263 L-HGYLSVKTDVFSYGVLVLEIVSG 286
+ S D++S G + E+V+G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 86 NFFSDLNQLGHGGFGPV-YRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNL 144
++ + ++G G G V + +G+ +AVKK+ + +Q NEV ++ QH+N+
Sbjct: 29 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V ++ G E +V E+L +L D + ++ + + V + L LH +
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+IHRDIK+ +ILL K+SDFG E + GT +MAPE
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 199
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
+ D++S G++V+E+V G
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDG 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNLV 145
+ L ++G G +G VY+ G+ A+KK+ ++ +G+ T E+ +L +++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 146 TLFGCCAEGPEKMLVYEYLPN---KSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
L+ +LV+E+L K LD L+ T ++ + G+ Y H
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD------VCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+ R++HRD+K N+L++ + KI+DFGLAR F G T + T Y AP+
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVL 172
Query: 263 L-HGYLSVKTDVFSYGVLVLEIVSG 286
+ S D++S G + E+V+G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAE-GPEKMLV--------YEYL-----PNKSLDYFIFDKTKSSSLDWTTRYR 189
++ L G C + GP ++V EYL P Y I ++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDI-NRVPEEQMTFKDLVS 161
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR 249
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 86 NFFSDLNQLGHGGFGPV-YRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNL 144
++ + ++G G G V + +G+ +AVKK+ + +Q NEV ++ QH+N+
Sbjct: 31 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V ++ G E +V E+L +L D + ++ + + V + L LH +
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+IHRDIK+ +ILL K+SDFG E + GT +MAPE
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 201
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
+ D++S G++V+E+V G
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 94 LGHGGFGPVYRGLMPN-GQEIAVKKLSV---------DSRQGLREFTNEVKLLLKI-QHK 142
LG G FG V G+E AV K++V D ++ L +E+K++ + QH+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL---MSELKIMSHLGQHE 110
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTR--YR 189
N+V L G C G +++ EY L F+ ++ + + ++R
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 190 IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR 249
VA+G+ +L A IHRD+ A N+LL KI DFGLAR + ++
Sbjct: 171 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE +V++DV+SYG+L+ EI S
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 83 VATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSV-DSRQGLREFT-NEVKLLLKI 139
+AT+ + + ++G G +G VY+ P +G +A+K + V + +GL T EV LL ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 140 Q---HKNLVTLFGCCAEGP-----EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+ H N+V L CA + LV+E++ Y DK L T ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
RGL +LH I+HRD+K NIL+ K++DFGLAR++ + +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVV 172
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEI 283
T Y APE L + D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 192
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 196
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 199
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 95 GHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEG 154
G FG V++ + N +AVK + +Q + E+ ++H+NL+ G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 155 P----EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP---- 206
E L+ + SL D K + + W + ++RGL YLHE+ P
Sbjct: 82 SNLEVELWLITAFHDKGSLT----DYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 207 ----ARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGE---DTHVNTFRISGTHGYMA 258
I HRD K+ N+LL L ++DFGLA R PG+ DTH GT YMA
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV----GTRRYMA 193
Query: 259 PEYALHGYLS------VKTDVFSYGVLVLEIVSGRKNHDG 292
PE L G ++ ++ D+++ G+++ E+VS K DG
Sbjct: 194 PE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 86 NFFSDLNQLGHGGFGPV-YRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNL 144
++ + ++G G G V + +G+ +AVKK+ + +Q NEV ++ QH+N+
Sbjct: 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V ++ G E +V E+L +L D + ++ + + V + L LH +
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+IHRDIK+ +ILL K+SDFG E + GT +MAPE
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 244
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
+ D++S G++V+E+V G
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 94 LGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNLVTL 147
+G G F V R ++ G+E+AVK +D Q L++ EV+++ + H N+V L
Sbjct: 23 IGKGNFAKVKLARHVL-TGREVAVK--IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
F LV EY + ++ + + ++R ++ + Y H++
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQKY-- 134
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE-YALHGY 266
I+HRD+KA N+LLD +N KI+DFG + F + ++TF G+ Y APE + Y
Sbjct: 135 -IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN-KLDTF--CGSPPYAAPELFQGKKY 190
Query: 267 LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ DV+S GV++ +VSG DG+ KE
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 200
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 94 LGHGGFGPVYR----GLMPNGQ--EIAVKKLSVDSRQGLRE-FTNEVKLLLKI-QHKNLV 145
LG G FG V G+ G ++AVK L + RE +E+K++ ++ H+N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSS---LDWTTRYRI------------ 190
L G C L++EY L ++ K + S +++ + R+
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 191 -----VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
VA+G+ +L ++ +HRD+ A N+L+ KI DFGLAR + +V
Sbjct: 173 DLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE G ++K+DV+SYG+L+ EI S
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E++ ++ L F+ D + + + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 86 NFFSDLNQLGHGGFGPV-YRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNL 144
++ + ++G G G V + +G+ +AVKK+ + +Q NEV ++ QH+N+
Sbjct: 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V ++ G E +V E+L +L D + ++ + + V + L LH +
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 266
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
+IHRDIK+ +ILL K+SDFG E + GT +MAPE
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGTPYWMAPELISR 321
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
+ D++S G++V+E+V G
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 LGHGGFGPVYR----GL---MPNG-QEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V GL PN ++AVK L D + + L + +E++++ I +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-----------FDKTKSSSLDWTTRYRIVM 192
++ L G C + ++ EY +L ++ ++ + + +++ +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 193 G--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D H +
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 248
Query: 251 SGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
T+G +MAPE + ++DV+S+GVL+ EI +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E +I+DFGLAR D + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSLDYFI------FDKTKSSSL--DWTTRYRIV---MG 193
L G C + G M++ E+ +L ++ F K L D+ T ++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + V
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 83 VATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSV-DSRQGLREFT-NEVKLLLKI 139
+AT+ + + ++G G +G VY+ P +G +A+K + V + +GL T EV LL ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 140 Q---HKNLVTLFGCCAEGP-----EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+ H N+V L CA + LV+E++ Y DK L T ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
RGL +LH I+HRD+K NIL+ K++DFGLAR++ + +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVV 172
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEI 283
T Y APE L + D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 94 LGHGGFGPVYRG----LMPNGQEIAVKKLS-VDSRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G FG VY G N + A+K LS + Q + F E L+ + H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYF----IFDKTKSSSLDWTTRYRIVMG--VARGLLYLH 202
G ML E LP+ L Y + +S + T + I G VARG+ YL
Sbjct: 89 GI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHVNTFRISGTHGYMAPEY 261
E+ + +HRD+ A N +LDE K++DFGLAR + E V R +
Sbjct: 142 EQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 262 ALHGY-LSVKTDVFSYGVLVLEIVS 285
+L Y + K+DV+S+GVL+ E+++
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L D+ D + + + + + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVK-----KLSVDSRQGLREFTNEVKLLLKIQH 141
+ + LG G FG V GQ++A+K L+ QG E E+ L ++H
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 72
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
+++ L+ E ++V EY N+ DY + + + R + + Y
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYC 128
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-GTHGYMAPE 260
H +I+HRD+K N+LLDE LN KI+DFGL+ + T N + S G+ Y APE
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE 181
Query: 261 YALHG--YLSVKTDVFSYGVLVLEIVSGRKNHD 291
+ G Y + DV+S GV++ ++ R D
Sbjct: 182 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L D+ D + + + + + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 176
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVK-----KLSVDSRQGLREFTNEVKLLLKIQH 141
+ + LG G FG V GQ++A+K L+ QG E E+ L ++H
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 73
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
+++ L+ E ++V EY N+ DY + + + R + + Y
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYC 129
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-GTHGYMAPE 260
H +I+HRD+K N+LLDE LN KI+DFGL+ + T N + S G+ Y APE
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE 182
Query: 261 YALHG--YLSVKTDVFSYGVLVLEIVSGRKNHD 291
+ G Y + DV+S GV++ ++ R D
Sbjct: 183 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 125 ---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 181
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 210
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 176
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 124 ---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L D+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 123 ---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVK-----KLSVDSRQGLREFTNEVKLLLKIQH 141
+ + LG G FG V GQ++A+K L+ QG E E+ L ++H
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 67
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
+++ L+ E ++V EY N+ DY + + + R + + Y
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYC 123
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-GTHGYMAPE 260
H +I+HRD+K N+LLDE LN KI+DFGL+ + T N + S G+ Y APE
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE 176
Query: 261 YALHG--YLSVKTDVFSYGVLVLEIVSGRKNHD 291
+ G Y + DV+S GV++ ++ R D
Sbjct: 177 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+ K+ +D+ +G+ E+ LL ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+ K+ +D+ +G+ E+ LL ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G T + T Y APE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 110/218 (50%), Gaps = 16/218 (7%)
Query: 73 NLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSR-QGLREFT- 130
NL+F Q + L ++G G +G VY+ G+ +A+K++ +D+ +G+
Sbjct: 13 NLYF-----QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI 67
Query: 131 NEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRI 190
E+ LL ++ H N+V+L LV+E++ K L + D+ K+ D + +
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYL 125
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ RG+ + H+ RI+HRD+K N+L++ K++DFGLAR F G T +
Sbjct: 126 YQ-LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEV 180
Query: 251 SGTHGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIVSGR 287
T Y AP+ + S D++S G + E+++G+
Sbjct: 181 V-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+L ++ L F+ D + + + + + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVY--------RGLMPNGQEIAVKKLSVD-SRQGLREFTNEVKLLLKI-QHKN 143
LG G FG V + +AVK L D + + L + +E++++ I +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------------FDKTKSSSLDWTTRYRI 190
++ L G C + ++ EY +L ++ ++ + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ARG+ YL A + IHRD+ A N+L+ E KI+DFGLAR D + T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + ++DV+S+GVL+ EI +
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 110/218 (50%), Gaps = 16/218 (7%)
Query: 73 NLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSR-QGLREFT- 130
NL+F Q + L ++G G +G VY+ G+ +A+K++ +D+ +G+
Sbjct: 13 NLYF-----QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI 67
Query: 131 NEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRI 190
E+ LL ++ H N+V+L LV+E++ K L + D+ K+ D + +
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYL 125
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ RG+ + H+ RI+HRD+K N+L++ K++DFGLAR F G T +
Sbjct: 126 YQ-LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEV 180
Query: 251 SGTHGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIVSGR 287
T Y AP+ + S D++S G + E+++G+
Sbjct: 181 V-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVK-----KLSVDSRQGLREFTNEVKLLLKIQH 141
+ + LG G FG V GQ++A+K L+ QG E E+ L ++H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 63
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
+++ L+ E ++V EY N+ DY + + + R + + Y
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYC 119
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-GTHGYMAPE 260
H +I+HRD+K N+LLDE LN KI+DFGL+ + T N + S G+ Y APE
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE 172
Query: 261 YALHG--YLSVKTDVFSYGVLVLEIVSGRKNHD 291
+ G Y + DV+S GV++ ++ R D
Sbjct: 173 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIX 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 13/210 (6%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-DKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
V L + LV+E+L S+D F D + + + + + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 125 H---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILL 179
Query: 264 H-GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 13/210 (6%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-DKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
V L + LV+E+L S+D F D + + + + + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 123 H---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILL 177
Query: 264 H-GYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
Y S D++S G + E+V+ R G
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 109 NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKS 168
+G+++AVK + + +Q NEV ++ QH N+V ++ G E ++ E+L +
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 169 LDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPK 228
L D L+ + V + L YLH + +IHRDIK+ +ILL K
Sbjct: 129 LT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVK 181
Query: 229 ISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
+SDFG + + GT +MAPE + + D++S G++V+E+V G
Sbjct: 182 LSDFGFCAQISKDVPKRKX--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVYR----GLMPN--GQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI-QHKNLV 145
LG G FG V GL+ + +AVK L + RE +E+K+L + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 146 TLFGCCAEGPEKMLVYEY--------LPNKSLDYFIFDKTKSSSLDWTTRYRIVMG---- 193
L G C G +++ EY + D FI KT + ++ +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 194 ---VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VA+G+ +L A IHRD+ A NILL KI DFGLAR + +V
Sbjct: 167 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + + ++DV+SYG+ + E+ S
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNLVTLFGC 150
LG G FG V + QE AVK ++ S + T EV+LL K+ H N++ LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+ +V E L I + + S D RI+ V G+ Y+H+ I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMHKH---NIV 143
Query: 211 HRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
HRD+K NILL+ + + KI DFGL+ F ++T + RI GT Y+APE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKD-RI-GTAYYIAPE-VLRGTY 199
Query: 268 SVKTDVFSYGVLVLEIVSG 286
K DV+S GV++ ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 146 TLFGCCAE--GPEKMLV--------YEYLPNKSLDYFIFDKTKSSSL-DWTTRYRIV--- 191
L G C + GP ++V YL +K ++ + + D+ T ++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVYR----GLMPN--GQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI-QHKNLV 145
LG G FG V GL+ + +AVK L + RE +E+K+L + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSL--------DYFIFDKTKSSSLDWTTRYRIVMG---- 193
L G C G +++ EY L D FI KT + ++ +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 194 ---VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VA+G+ +L A IHRD+ A NILL KI DFGLAR + +V
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + + ++DV+SYG+ + E+ S
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI 139
+ + LG G FG V G+ +AVK L D R + E+ +L +
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL 73
Query: 140 QHKNLVTLFGCCAEGPEK--MLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
H++++ GCC + EK LV EY+P SL D S+ + G
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-- 255
+ YLH + IHR++ A N+LLD KI DFGLA+ P E R G
Sbjct: 130 MAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF 185
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ APE +DV+S+GV + E+++
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI 139
+ + LG G FG V G+ +AVK L D R + E+ +L +
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL 73
Query: 140 QHKNLVTLFGCCAEGPEK--MLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
H++++ GCC + EK LV EY+P SL D S+ + G
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEG 129
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-- 255
+ YLH + IHR++ A N+LLD KI DFGLA+ P E R G
Sbjct: 130 MAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF 185
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ APE +DV+S+GV + E+++
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 14/212 (6%)
Query: 93 QLGHGGFGPVYRGL--MPNGQ-EIAVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+LG G FG V +G+ M Q ++A+K L + + E E +++ ++ + +V L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G C + MLV E L F+ K + + + ++ V+ G+ YL E+
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEK---N 130
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH--GYMAPEYALHGY 266
+HRD+ A N+LL + KISDFGL++ +D++ T R +G + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY-TARSAGKWPLKWYAPECINFRK 189
Query: 267 LSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKE 297
S ++DV+SYGV + E +S G+K + G E
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 83 VATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVK 134
+A F D + LG G +G V + +E +AVK K +VD + +++ E+
Sbjct: 1 MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMG 193
+ + H+N+V +G EG + L EY L FD+ + + R
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQ 113
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 254 HGYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 91 LNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQ----GLREFTNEVKLLLKIQHKNL 144
L +G G F V R ++ G+E+AVK +D Q L++ EV++ + H N+
Sbjct: 19 LKTIGKGNFAKVKLARHIL-TGKEVAVK--IIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V LF LV EY + ++ + + ++R ++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YCHQK 132
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPE-YA 262
I+HRD+KA N+LLD N KI+DFG F E T N G Y APE +
Sbjct: 133 F---IVHRDLKAENLLLDADXNIKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
Y + DV+S GV++ +VSG DG+ KE
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVYR----GLMPN--GQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI-QHKNLV 145
LG G FG V GL+ + +AVK L + RE +E+K+L + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 146 TLFGCCAEGPEKMLVYEY--------LPNKSLDYFIFDKTKSSSLDWTTRYRIVMG---- 193
L G C G +++ EY + D FI KT + ++ +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 194 ---VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VA+G+ +L A IHRD+ A NILL KI DFGLAR + +V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + + ++DV+SYG+ + E+ S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVYR----GLMPN--GQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI-QHKNLV 145
LG G FG V GL+ + +AVK L + RE +E+K+L + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 146 TLFGCCAEGPEKMLVYEY--------LPNKSLDYFIFDKTKSSSLDWTTRYRIVMG---- 193
L G C G +++ EY + D FI KT + ++ +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 194 ---VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VA+G+ +L A IHRD+ A NILL KI DFGLAR + +V
Sbjct: 169 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + + ++DV+SYG+ + E+ S
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTN-----EVKLLLKIQH 141
+ L+ LG G F VY+ N Q +A+KK+ + R ++ N E+KLL ++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
N++ L LV++++ L+ I D + + Y ++ +GL YL
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYL 128
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEY 261
H+ I+HRD+K +N+LLDE K++DFGLA+ F G ++ T Y APE
Sbjct: 129 HQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVV-TRWYRAPEL 183
Query: 262 ALHGYL-SVKTDVFSYGVLVLEIV 284
+ V D+++ G ++ E++
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELL 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 94 LGHGGFGPVYR----GLMPN--GQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI-QHKNLV 145
LG G FG V GL+ + +AVK L + RE +E+K+L + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 146 TLFGCCAEGPEKMLVYEY--------LPNKSLDYFIFDKTKSSSLDWTTRYRIVMG---- 193
L G C G +++ EY + D FI KT + ++ +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 194 ---VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
VA+G+ +L A IHRD+ A NILL KI DFGLAR + +V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE + + ++DV+SYG+ + E+ S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNLVTLFGC 150
LG G FG V + QE AVK ++ S + T EV+LL K+ H N++ LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+ +V E L I + + S D RI+ V G+ Y+H+ I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMHKH---NIV 143
Query: 211 HRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
HRD+K NILL+ + + KI DFGL+ F ++T + RI GT Y+APE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKD-RI-GTAYYIAPE-VLRGTY 199
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALEL 317
K DV+S GV++ ++SG GK + D+L T G+ A +L
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVET---GKYAFDL 243
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 86 NFFSDLNQLGHGGFG--------PVYRGLMPNGQEIAVKKLSVDSRQGLRE-FTNEVKLL 136
+ + LG G FG P G G+ +AVK L D+ R + E+ +L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADAGPQHRSGWKQEIDIL 87
Query: 137 LKIQHKNLVTLFGCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGV 194
+ H++++ GCC A LV EY+P SL D S+ +
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQI 143
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G+ YLH + IHRD+ A N+LLD KI DFGLA+ P E R G
Sbjct: 144 CEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEXYRVREDGDS 199
Query: 255 G--YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ APE +DV+S+GV + E+++
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNLVTLFGC 150
LG G FG V + QE AVK ++ S + T EV+LL K+ H N++ LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 151 CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARII 210
+ +V E L I + + S D RI+ V G+ Y+H+ I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMHKH---NIV 143
Query: 211 HRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
HRD+K NILL+ + + KI DFGL+ F ++T + RI GT Y+APE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKD-RI-GTAYYIAPE-VLRGTY 199
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALEL 317
K DV+S GV++ ++SG GK + D+L T G+ A +L
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVET---GKYAFDL 243
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
F + ++G G +G VY+ G+ +A+KK+ +D+ +G+ E+ LL ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E++ ++ L F+ D + + + + + +GL + H
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
R++HRD+K N+L++ + K++DFGLAR F G + T Y APE L
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 265 -GYLSVKTDVFSYGVLVLEIVSGR 287
Y S D++S G + E+V+ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G +G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 90 DLNQ-LGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKLLLKIQHKN 143
DL Q LG G +G V + +E +AVK K +VD + +++ E+ + + H+N
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHEN 64
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLH 202
+V +G EG + L EY L FD+ + + R + G++YLH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE-Y 261
I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT Y+APE
Sbjct: 121 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 262 ALHGYLSVKTDVFSYGVLVLEIVSG 286
+ + DV+S G+++ +++G
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 94 LGHGGFGPVYRG------LMPNGQEIAVKKLSVDSRQGL-REFTNEVKLLLKI-QHKNLV 145
LG G FG V + +AVK L + R +E+K+L+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 146 TLFGCCAE-GPEKMLVYEYLPNKSL--------DYFIFDKTKSSSL--DWTTRYRIV--- 191
L G C + G M++ E+ +L + F+ K L D+ T ++
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQGLR--EFTNEVKLLLKI-QHK 142
F L LG G FG V+ R NG+ A+K L + L+ E TN+ +L+L I H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRH-NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
++ ++G + + ++ +Y+ L + KS V L YLH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+ II+RD+K NILLD+ + KI+DFG A+ P T+ + GT Y+APE
Sbjct: 124 SKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYXLCGTPDYIAPEVV 175
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
+ D +S+G+L+ E+++G
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQ-EIAVKKLS---------VDSRQGLREF-- 129
++ ++F + +LG G +G V NG E A+K + D + + +F
Sbjct: 33 KIGESYFK-VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91
Query: 130 --TNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTR 187
NE+ LL + H N++ LF + LV E+ L I ++ K D
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN- 150
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTH 244
I+ + G+ YLH+ I+HRDIK NILL+ + LN KI DFGL+ F +
Sbjct: 151 --IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 245 VNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
+ GT Y+APE Y + K DV+S GV++ ++ G
Sbjct: 206 RDRL---GTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + K + E E ++ ++ + +V +
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 488
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 544
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 594
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 595 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 626
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + K + E E ++ ++ + +V +
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 489
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 545
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 595
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 596 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 627
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 93 QLGHGGFGPVY--RGLMPNGQEIAVKKLSVDS-RQGLREFT-NEVKLLLKIQ---HKNLV 145
++G G +G V+ R L G+ +A+K++ V + +G+ T EV +L ++ H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 146 TLFGCCA-----EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
LF C + LV+E++ Y DK + T ++ + RGL +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
LH R++HRD+K NIL+ K++DFGLAR++ + + T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPE 189
Query: 261 YALHGYLSVKTDVFSYGVLVLEI 283
L + D++S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 30/229 (13%)
Query: 92 NQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLR------EFTNEVKLLLKIQHKNL 144
+ LG G FG V G G ++AVK L+ RQ +R + E++ L +H ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L+ + + +V EY+ L +I K+ LD R+ + G+ Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFP-GEDTHVNTFRIS-GTHGYMAPEYA 262
++HRD+K N+LLD +N KI+DFGL+ + GE R S G+ Y APE
Sbjct: 136 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-----FLRXSCGSPNYAAPE-V 186
Query: 263 LHG--YLSVKTDVFSYGVLVLEIVSGR----KNHDGRLGKEKADLLSYT 305
+ G Y + D++S GV++ ++ G +H L K+ D + YT
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYT 235
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 59 ESAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRG-LMPNGQEIAVKK 117
ES+++ +G G +S N ++ + F + LG G FG V + G AVK
Sbjct: 4 ESSKEGNGIGVNSSN--------RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV 55
Query: 118 LSVDS--RQGLREFTNEVKLLLKI--QHKNLVTLFGCCAEGPEKML-VYEYLPNKSLDYF 172
L D + E T K +L + H L LF CC + P+++ V E++ L
Sbjct: 56 LKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF-CCFQTPDRLFFVMEFVNGGDL--- 111
Query: 173 IFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDF 232
+F KS D + L++LH++ II+RD+K N+LLD + + K++DF
Sbjct: 112 MFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADF 168
Query: 233 GLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
G+ + G V T GT Y+APE D ++ GVL+ E++ G
Sbjct: 169 GMCK--EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 37/288 (12%)
Query: 93 QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQG-----LREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + + + + E E ++ ++ + +V +
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 124
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 180
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 230
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLPKPG 369
A C R+ L LC V RP +V L L + + G
Sbjct: 231 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 273
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HRD+ A N ++ KI DFG+ R D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETA 184
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +MAPE G + +D++S+GV++ EI S
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 36/239 (15%)
Query: 66 GSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLSVD 121
GS D W +VA + +LG G FG VY +G++ + E V +V+
Sbjct: 1 GSVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 51
Query: 122 SRQGLRE---FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF---- 174
+RE F NE ++ + ++V L G ++G +++ E + L ++
Sbjct: 52 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 111
Query: 175 ---DKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISD 231
+ + + ++ +A G+ YL+ + +HRD+ A N ++ E KI D
Sbjct: 112 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 168
Query: 232 FGLARLFPGEDTHVNTFRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
FG+ R D + + G G +M+PE G + +DV+S+GV++ EI +
Sbjct: 169 FGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 28/271 (10%)
Query: 93 QLGHGGFGPVYRG-LMPNGQEIAVKKLSV----DSRQGLREFTNEVKLLLKIQHKNLVTL 147
++G G F VYR + +G +A+KK+ + D++ + E+ LL ++ H N++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK-ARADCIKEIDLLKQLNHPNVIKY 97
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFI--FDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+ E E +V E L I F K K + T ++ + + L ++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-WKYFVQLCSALEHMHSR- 155
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
R++HRDIK +N+ + K+ D GL R F + T ++ + GT YM+PE
Sbjct: 156 --RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHEN 211
Query: 266 YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALELVD-PSLAK 324
+ K+D++S G L+ E+ + + G +K +L S K +E D P L
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSPFYG----DKMNLYSLC-------KKIEQCDYPPLPS 260
Query: 325 CNRDEAAMCIQLGLLCCQQSVAERPDMNSVH 355
+ E QL +C +RPD+ V+
Sbjct: 261 DHYSEELR--QLVNMCINPDPEKRPDVTYVY 289
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 84 ATNFFSDLNQLGHGGFGPVY--RGLMPNGQEIAVKKLSVDS-RQGLREFT-NEVKLLLKI 139
A + + ++G G +G V+ R L G+ +A+K++ V + +G+ T EV +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 140 Q---HKNLVTLFGCCA-----EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+ H N+V LF C + LV+E++ Y DK + T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMM 126
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
+ RGL +LH R++HRD+K NIL+ K++DFGLAR++ + +
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 252 GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEI 283
T Y APE L + D++S G + E+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HRD+ A N ++ KI DFG+ R D +
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETD 183
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +MAPE G + +D++S+GV++ EI S
Sbjct: 184 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 37/288 (12%)
Query: 93 QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQG-----LREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + + + + E E ++ ++ + +V +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 136
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 192
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 242
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGDSFTLPKPG 369
A C R+ L LC V RP +V L L + + G
Sbjct: 243 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 83 VATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLREF-----TNEVKLL 136
+AT+ + + ++G G +G VY+ P +G +A+K + V + G EV LL
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 137 LKIQ---HKNLVTLFGCCAEGP-----EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRY 188
+++ H N+V L CA + LV+E++ Y DK L T
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL--DKAPPPGLPAETIK 123
Query: 189 RIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF 248
++ RGL +LH I+HRD+K NIL+ K++DFGLAR++ +
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALT 177
Query: 249 RISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEI 283
+ T Y APE L + D++S G + E+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 78 LRTLQVATNFFSDLNQLGHGGFGPVYRGLM-PNGQEIAVKKLSVDSRQ---GLREFTNEV 133
L + ++F D LG GGFG V+ M G+ A KKL+ + G + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
K+L K+ + +V+L + LV + + Y I++ + + R
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 194 -VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+ GL +LH+ II+RD+K N+LLD+ N +ISD GLA T + +G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T G+MAPE L D F+ GV + E+++ R R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 91 LNQLGHGGFGPVY--RGLMPNGQEIAVKKLSVDS-RQGLREFT-NEVKLLLKIQ---HKN 143
+ ++G G +G V+ R L G+ +A+K++ V + +G+ T EV +L ++ H N
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 144 LVTLFGCCA-----EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
+V LF C + LV+E++ Y DK + T ++ + RGL
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH R++HRD+K NIL+ K++DFGLAR++ + + T Y A
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRA 187
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEI 283
PE L + D++S G + E+
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 78 LRTLQVATNFFSDLNQLGHGGFGPVYRGLM-PNGQEIAVKKLSVDSRQ---GLREFTNEV 133
L + ++F D LG GGFG V+ M G+ A KKL+ + G + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
K+L K+ + +V+L + LV + + Y I++ + + R
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 194 -VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+ GL +LH+ II+RD+K N+LLD+ N +ISD GLA T + +G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T G+MAPE L D F+ GV + E+++ R R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 78 LRTLQVATNFFSDLNQLGHGGFGPVYRGLM-PNGQEIAVKKLSVDSRQ---GLREFTNEV 133
L + ++F D LG GGFG V+ M G+ A KKL+ + G + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
K+L K+ + +V+L + LV + + Y I++ + + R
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 194 -VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+ GL +LH+ II+RD+K N+LLD+ N +ISD GLA T + +G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T G+MAPE L D F+ GV + E+++ R R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ C + + Y N L +I K S D T + L YLH +
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 157
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 158 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 217 CKSSDLWALGCIIYQLVAG 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQG-----LREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + + + + E E ++ ++ + +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 130
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 186
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 236
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 237 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 78 LRTLQVATNFFSDLNQLGHGGFGPVYRGLM-PNGQEIAVKKLSVDSRQ---GLREFTNEV 133
L + ++F D LG GGFG V+ M G+ A KKL+ + G + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
K+L K+ + +V+L + LV + + Y I++ + + R
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 194 -VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+ GL +LH+ II+RD+K N+LLD+ N +ISD GLA T + +G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T G+MAPE L D F+ GV + E+++ R R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HRD+ A N ++ KI DFG+ R D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETD 184
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +MAPE G + +D++S+GV++ EI S
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + K + E E ++ ++ + +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 146
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 202
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 252
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 253 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + K + E E ++ ++ + +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 146
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 202
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 252
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 253 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQG-----LREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + + + + E E ++ ++ + +V +
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 126
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 182
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 232
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 233 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 84 ATNFFSD---LNQLGHGGFGPVYRGLMPNGQE-IAVK----KLSVDSRQGLREFTNEVKL 135
A F D + LG G G V + +E +AVK K +VD + +++ E+ +
Sbjct: 1 AVPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICI 57
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGV 194
+ H+N+V +G EG + L EY L FD+ + + R +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQL 113
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH 254
G++YLH I HRDIK N+LLDE+ N KISDFGLA +F + ++ GT
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 255 GYMAPE-YALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+APE + + DV+S G+++ +++G
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + K + E E ++ ++ + +V +
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 144
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ + + THG + APE
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 200
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 250
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 251 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+VA + +LG G FG VY +G++ + E V +V+ +RE F NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPN-------KSLDYFIFDKTKSSSLDWTTR 187
++ + ++V L G ++G +++ E + +SL + + + +
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
++ +A G+ YL+ + +HRD+ A N ++ E KI DFG+ R D +
Sbjct: 131 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETD 182
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +M+PE G + +DV+S+GV++ EI +
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 64 ADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLS 119
AD D W +VA + +LG G FG VY +G++ + E V +
Sbjct: 12 ADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 120 VDSRQGLRE---FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPN-------KSL 169
V+ +RE F NE ++ + ++V L G ++G +++ E + +SL
Sbjct: 63 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 122
Query: 170 DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKI 229
+ + + + ++ +A G+ YL+ + +HRD+ A N ++ E KI
Sbjct: 123 RPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179
Query: 230 SDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
DFG+ R D + + G G +M+PE G + +DV+S+GV++ EI
Sbjct: 180 GDFGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 285 S 285
+
Sbjct: 235 T 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 122/277 (44%), Gaps = 37/277 (13%)
Query: 93 QLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTL 147
+LG G FG V +G + + K + E E ++ ++ + +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
G C E MLV E L+ ++ ++ + +V V+ G+ YL E +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 130
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYA 262
+HRD+ A N+LL Q KISDFGL++ ++ N ++ + THG + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE---NXYK-AQTHGKWPVKWYAPECI 186
Query: 263 LHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELVDPS 321
+ S K+DV+S+GVL+ E S G+K + G G E +L EK + P
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---------EKGERMGCP- 236
Query: 322 LAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLML 358
A C R+ L LC V RP +V L L
Sbjct: 237 -AGCPRE----MYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +G G FG V G G ++AVK + D+ + F E ++ +++H NLV L G
Sbjct: 17 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 73
Query: 151 CAEGPEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
E + +V EY+ SL ++ + +S L + + V + YL
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 210 IHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRD+ A N+L+ E K+SDFGL + +DT + + APE S
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFS 183
Query: 269 VKTDVFSYGVLVLEIVS 285
K+DV+S+G+L+ EI S
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKL--SVDSRQGLREFTNEVKLLLKIQHKNL 144
DL ++G G +G V + + P+GQ +AVK++ +VD ++ + + ++ +
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRY----RIVMGVARGLLY 200
V +G + + E + + S D F K S LD +I + + L +
Sbjct: 84 VQFYGALFREGDCWICMELM-STSFDKFY--KYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
L E +IIHRDIK SNILLD N K+ DFG++ D+ T R +G YMAPE
Sbjct: 141 LKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKT-RDAGCRPYMAPE 195
Query: 261 -----YALHGYLSVKTDVFSYGVLVLEIVSGR 287
+ GY V++DV+S G+ + E+ +GR
Sbjct: 196 RIDPSASRQGY-DVRSDVWSLGITLYELATGR 226
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 18/251 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQ----EIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTL 147
LG G FG V G + ++AVK + +D S++ + EF +E + H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 148 FGCCAEG-----PEKMLVYEYLPNKSL-DYFIFDK--TKSSSLDWTTRYRIVMGVARGLL 199
G C E P+ M++ ++ L Y ++ + T + T + ++ +A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YL +HRD+ A N +L + + ++DFGL++ D + ++A
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKEKADLLSYTWTLFQGEKALELV 318
E + K+DV+++GV + EI + G + G E D L + L Q E L+ +
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDEL 278
Query: 319 DPSLAKCNRDE 329
+ C R +
Sbjct: 279 YEIMYSCWRTD 289
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 14/212 (6%)
Query: 93 QLGHGGFGPVYRGL--MPNGQ-EIAVKKLSVDSRQG-LREFTNEVKLLLKIQHKNLVTLF 148
+LG G FG V +G+ M Q ++A+K L + + E E +++ ++ + +V L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G C + MLV E L F+ K + + + ++ V+ G+ YL E+
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEK---N 456
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH--GYMAPEYALHGY 266
+HR++ A N+LL + KISDFGL++ +D++ T R +G + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY-TARSAGKWPLKWYAPECINFRK 515
Query: 267 LSVKTDVFSYGVLVLEIVS-GRKNHDGRLGKE 297
S ++DV+SYGV + E +S G+K + G E
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 36/241 (14%)
Query: 64 ADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLS 119
AD D W +VA + +LG G FG VY +G++ + E V +
Sbjct: 6 ADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 56
Query: 120 VDSRQGLRE---FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-- 174
V+ +RE F NE ++ + ++V L G ++G +++ E + L ++
Sbjct: 57 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 116
Query: 175 -----DKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKI 229
+ + + ++ +A G+ YL+ + +HRD+ A N ++ E KI
Sbjct: 117 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 173
Query: 230 SDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
DFG+ R D + + G G +M+PE G + +DV+S+GV++ EI
Sbjct: 174 GDFGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
Query: 285 S 285
+
Sbjct: 229 T 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI 139
+ + LG G FG V G+ +AVK L LR + E+++L +
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL 67
Query: 140 QHKNLVTLFGCCAEGPEK--MLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
H+++V GCC + EK LV EY+P SL D + + G
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEG 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-- 255
+ YLH + IHR + A N+LLD KI DFGLA+ P E R G
Sbjct: 124 MAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF 179
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ APE +DV+S+GV + E+++
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMP-----NGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKI 139
+ + LG G FG V G+ +AVK L LR + E+++L +
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL 68
Query: 140 QHKNLVTLFGCCAEGPEK--MLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
H+++V GCC + EK LV EY+P SL D + + G
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEG 124
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG-- 255
+ YLH + IHR + A N+LLD KI DFGLA+ P E R G
Sbjct: 125 MAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF 180
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ APE +DV+S+GV + E+++
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 36/241 (14%)
Query: 64 ADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLS 119
AD D W +VA + +LG G FG VY +G++ + E V +
Sbjct: 5 ADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 55
Query: 120 VDSRQGLRE---FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-- 174
V+ +RE F NE ++ + ++V L G ++G +++ E + L ++
Sbjct: 56 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 115
Query: 175 -----DKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKI 229
+ + + ++ +A G+ YL+ + +HRD+ A N ++ E KI
Sbjct: 116 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 172
Query: 230 SDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
DFG+ R D + + G G +M+PE G + +DV+S+GV++ EI
Sbjct: 173 GDFGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 285 S 285
+
Sbjct: 228 T 228
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K + L
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 176 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 227
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 228 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 274
Query: 362 SFTL 365
+
Sbjct: 275 PLAV 278
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+VA + +LG G FG VY +G++ + E V +V+ +RE F NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-------DKTKSSSLDWTTR 187
++ + ++V L G ++G +++ E + L ++ + + +
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
++ +A G+ YL+ + +HRD+ A N ++ E KI DFG+ R D +
Sbjct: 132 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETD 183
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +M+PE G + +DV+S+GV++ EI +
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 36/241 (14%)
Query: 64 ADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLS 119
AD D W +VA + +LG G FG VY +G++ + E V +
Sbjct: 5 ADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 55
Query: 120 VDSRQGLRE---FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-- 174
V+ +RE F NE ++ + ++V L G ++G +++ E + L ++
Sbjct: 56 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 115
Query: 175 -----DKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKI 229
+ + + ++ +A G+ YL+ + +HRD+ A N ++ E KI
Sbjct: 116 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 172
Query: 230 SDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
DFG+ R D + + G G +M+PE G + +DV+S+GV++ EI
Sbjct: 173 GDFGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 285 S 285
+
Sbjct: 228 T 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 36/241 (14%)
Query: 64 ADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLS 119
AD D W +VA + +LG G FG VY +G++ + E V +
Sbjct: 12 ADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 120 VDSRQGLRE---FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-- 174
V+ +RE F NE ++ + ++V L G ++G +++ E + L ++
Sbjct: 63 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 122
Query: 175 -----DKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKI 229
+ + + ++ +A G+ YL+ + +HRD+ A N ++ E KI
Sbjct: 123 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179
Query: 230 SDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
DFG+ R D + + G G +M+PE G + +DV+S+GV++ EI
Sbjct: 180 GDFGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 285 S 285
+
Sbjct: 235 T 235
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 94 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 142 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 198
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 199 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 250
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 251 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 297
Query: 362 SFTL 365
+
Sbjct: 298 PLAV 301
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 143 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 199
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 200 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 251
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 252 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 298
Query: 362 SFTL 365
+
Sbjct: 299 PLAV 302
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR D
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 172
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
+ F T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 173 DEMAGF--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 227
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 228 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 274
Query: 362 SFTL 365
+
Sbjct: 275 PLAV 278
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 93 QLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLFGC 150
+LG GGFG V R + + G+++A+K+ + RE + E++++ K+ H N+V+
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 151 CAEGPEKM-------LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+G +K+ L EY L ++ L ++ ++ L YLHE
Sbjct: 82 -PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 204 EAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
RIIHRD+K NI+L ++L KI D G A+ D GT Y+APE
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 194
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSG 286
+V D +S+G L E ++G
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 93 QLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLFGC 150
+LG GGFG V R + G+++A+K+ + RE + E++++ K+ H N+V+
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 151 CAEGPEKM-------LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+G +K+ L EY L ++ L ++ ++ L YLHE
Sbjct: 81 -PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 204 EAPARIIHRDIKASNILLD---EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
RIIHRD+K NI+L ++L KI D G A+ D GT Y+APE
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 193
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSG 286
+V D +S+G L E ++G
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 83 VATNFFSDLNQLGHGGFGPVYRGLMPNGQEIA----VKKLSVDSRQGLREFTNEVKLLLK 138
V + F L +G G FG V + +++ + K R +R E++++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
++H LV L+ + + +V + L L Y + ++ T + + L
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL---QQNVHFKEETVKLFICELVMAL 128
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
YL + RIIHRD+K NILLDE + I+DF +A + P E T + T ++GT YMA
Sbjct: 129 DYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT--MAGTKPYMA 182
Query: 259 PEYALH----GYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE GY S D +S GV E++ GR+ + R
Sbjct: 183 PEMFSSRKGAGY-SFAVDWWSLGVTAYELLRGRRPYHIR 220
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +G G FG V G G ++AVK + D+ + F E ++ +++H NLV L G
Sbjct: 26 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 82
Query: 151 CAEGPEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
E + +V EY+ SL ++ + +S L + + V + YL
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 210 IHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRD+ A N+L+ E K+SDFGL + +DT + + APE S
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFS 192
Query: 269 VKTDVFSYGVLVLEIVS 285
K+DV+S+G+L+ EI S
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR D
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
+ F T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 177 DEMAGF--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 231
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 232 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 278
Query: 362 SFTL 365
+
Sbjct: 279 PLAV 282
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 36/241 (14%)
Query: 64 ADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLS 119
AD D W +VA + +LG G FG VY +G++ + E V +
Sbjct: 34 ADVYVPDEW---------EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 84
Query: 120 VDSRQGLRE---FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-- 174
V+ +RE F NE ++ + ++V L G ++G +++ E + L ++
Sbjct: 85 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 144
Query: 175 -----DKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKI 229
+ + + ++ +A G+ YL+ + +HRD+ A N ++ E KI
Sbjct: 145 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 201
Query: 230 SDFGLARLFPGEDTHVNTFRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
DFG+ R D + + G G +M+PE G + +DV+S+GV++ EI
Sbjct: 202 GDFGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
Query: 285 S 285
+
Sbjct: 257 T 257
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 15/169 (8%)
Query: 117 KLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL-----DY 171
K+S+ S+ +F NE++++ I+++ +T G E ++YEY+ N S+ +
Sbjct: 80 KISIKSKYD--DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 172 FIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISD 231
F+ DK + + I+ V Y+H E I HRD+K SNIL+D+ K+SD
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSD 195
Query: 232 FGLARLFPGEDTHVNTFRISGTHGYMAPEYALH--GYLSVKTDVFSYGV 278
FG + D + R GT+ +M PE+ + Y K D++S G+
Sbjct: 196 FGESEYMV--DKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 176 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 227
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 228 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 274
Query: 362 SFTL 365
+
Sbjct: 275 PLAV 278
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 231
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 232 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 278
Query: 362 SFTL 365
+
Sbjct: 279 PLAV 282
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 186 T-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 237
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 238 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 284
Query: 362 SFTL 365
+
Sbjct: 285 PLAV 288
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HRD+ A N ++ KI DFG+ R D
Sbjct: 130 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 186
Query: 248 FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +MAPE G + +D++S+GV++ EI S
Sbjct: 187 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HRD+ A N ++ KI DFG+ R D
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 248 FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +MAPE G + +D++S+GV++ EI S
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HRD+ A N ++ KI DFG+ R D
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 248 FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +MAPE G + +D++S+GV++ EI S
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 109/258 (42%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P +SGT Y+
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT----LSGTLDYL 174
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 235 RDLIS-RLLKHNPSQRPM 251
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HR++ A N ++ KI DFG+ R D +
Sbjct: 134 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR-----DIYETD 185
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +MAPE G + +D++S+GV++ EI S
Sbjct: 186 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR
Sbjct: 143 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----H 194
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 195 TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 251
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 252 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 298
Query: 362 SFTL 365
+
Sbjct: 299 PLAV 302
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRG----LMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+V+ + L +LG G FG VY G ++ E V +V+ LRE F NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD-----KTKSSSLDWTTRYR 189
++ ++V L G ++G ++V E + + L ++ + T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 190 IVMG--VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
I M +A G+ YL+ + + +HR++ A N ++ KI DFG+ R D +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR-----DIYETD 184
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +MAPE G + +D++S+GV++ EI S
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 26/233 (11%)
Query: 67 SGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLS---- 119
SG D + NL+F + + + +LG G F V + G+E A K +
Sbjct: 9 SGVDLGTENLYFQ----SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRL 64
Query: 120 VDSRQGL--REFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKT 177
SR+G+ E EV +L +I+H N++TL + +L+ E + L F+ +K
Sbjct: 65 XSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK- 123
Query: 178 KSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNI-LLDEQL-NPKIS--DFG 233
+S + D T++ + + G+ YLH + RI H D+K NI LLD+ + NP+I DFG
Sbjct: 124 ESLTEDEATQF--LKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 178
Query: 234 LARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
+A + N F GT ++APE + L ++ D++S GV+ ++SG
Sbjct: 179 IAHKIEAGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +G G FG V G G ++AVK + D+ + F E ++ +++H NLV L G
Sbjct: 11 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 67
Query: 151 CAEGPEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
E + +V EY+ SL ++ + +S L + + V + YL
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 210 IHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRD+ A N+L+ E K+SDFGL + +DT + + APE S
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFS 177
Query: 269 VKTDVFSYGVLVLEIVS 285
K+DV+S+G+L+ EI S
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR D
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
+ F T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 177 DEMAGF--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 28/246 (11%)
Query: 54 GRAAGESAEDADGSGADSWNLFFDLRTLQVAT----NFFSDLNQLGHGGFGPVYRGLMPN 109
G+ G D D D W + + ++V +++ L +LG G FG V+R +
Sbjct: 16 GKYDGPKINDYDKFYEDIWKKYVP-QPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKA 74
Query: 110 GQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNK 167
+ V K +++ L ++T NE+ ++ ++ H L+ L + E +L+ E+L
Sbjct: 75 TGRVFVAKF-INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133
Query: 168 SLDYFIFDKTKSSSLDWTTRYRIVMGVAR----GLLYLHEEAPARIIHRDIKASNILLDE 223
L FD+ + D+ V+ R GL ++HE + I+H DIK NI+ +
Sbjct: 134 EL----FDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCET 184
Query: 224 QL--NPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLV 280
+ + KI DFGLA +L P E V T T + APE + TD+++ GVL
Sbjct: 185 KKASSVKIIDFGLATKLNPDEIVKVTT----ATAEFAAPEIVDREPVGFYTDMWAIGVLG 240
Query: 281 LEIVSG 286
++SG
Sbjct: 241 YVLLSG 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGC 150
L +G G FG V G G ++AVK + D+ + F E ++ +++H NLV L G
Sbjct: 198 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 254
Query: 151 CAEGPEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
E + +V EY+ SL ++ + +S L + + V + YL
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 210 IHRDIKASNILLDEQLNPKISDFGLAR-LFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRD+ A N+L+ E K+SDFGL + +DT + + APE S
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFS 364
Query: 269 VKTDVFSYGVLVLEIVS 285
K+DV+S+G+L+ EI S
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 53/304 (17%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L +G G +G V G +AVKKLS S + E++L
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 85 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 132
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 133 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 189
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADL 301
T T Y APE L+ + + D++S G ++ E+++GR G + D
Sbjct: 190 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHIDQ 241
Query: 302 LSYTWTLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERPDMNSVHLMLSGD 361
L L G EL L K + + A I QS+A+ P MN ++ + +
Sbjct: 242 LKLILRLV-GTPGAEL----LKKISSESARNYI--------QSLAQMPKMNFANVFIGAN 288
Query: 362 SFTL 365
+
Sbjct: 289 PLAV 292
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+VA + +LG G FG VY +G++ + E V +V+ +RE F NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-------DKTKSSSLDWTTR 187
++ + ++V L G ++G +++ E + L ++ + + +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
++ +A G+ YL+ + +HRD+ A N + E KI DFG+ R D +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR-----DIYETD 179
Query: 248 FRISGTHG-----YMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ G G +M+PE G + +DV+S+GV++ EI +
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 45/260 (17%)
Query: 56 AAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPV---YRGLMPNGQE 112
AA +A++ A S+++ FD+ + + + +G+G +G V R L GQ+
Sbjct: 31 AASVAAKNLALLKARSFDVTFDV------GDEYEIIETIGNGAYGVVSSARRRL--TGQQ 82
Query: 113 IAVKKL--SVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLD 170
+A+KK+ + D + E+K+L +H N++ + K ++ +P
Sbjct: 83 VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFK 133
Query: 171 --YFIFDKTKS-------SSLDWT---TRYRIVMGVARGLLYLHEEAPARIIHRDIKASN 218
Y + D +S SS T RY + + RGL Y+H A++IHRD+K SN
Sbjct: 134 SVYVVLDLMESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLKYMHS---AQVIHRDLKPSN 189
Query: 219 ILLDEQLNPKISDFGLAR---LFPGEDTHVNTFRISGTHGYMAPE--YALHGYLSVKTDV 273
+L++E KI DFG+AR P E + T ++ T Y APE +LH Y D+
Sbjct: 190 LLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAPELMLSLHEYTQA-IDL 247
Query: 274 FSYGVLVLEIVSGRKNHDGR 293
+S G + E+++ R+ G+
Sbjct: 248 WSVGCIFGEMLARRQLFPGK 267
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 268 SVKTDVFSYGVLVLEIVSG 286
S +D+++ G ++ ++V+G
Sbjct: 212 SKSSDLWALGCIIYQLVAG 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLV 145
+ L++LG G + VY+G +A+K++ ++ +G EV LL ++H N+V
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
TL LV+EYL +K L ++ D ++ + + + RGL Y H +
Sbjct: 64 TLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCHRQ- 119
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
+++HRD+K N+L++E+ K++DFGLAR + T+ + P L G
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 266 Y--LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
S + D++ G + E+ +GR G +E+
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 25/208 (12%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE------FTNEVKLLLKIQHKNLVT 146
LG G FG V Q++A+K +S RQ L++ E+ L ++H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFIS---RQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
L+ + ++V EY + DY + + K + D R+ + + Y H
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRF--FQQIICAIEYCHRH-- 127
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-GTHGYMAPEYALHG 265
+I+HRD+K N+LLD+ LN KI+DFGL+ + T N + S G+ Y APE ++G
Sbjct: 128 -KIVHRDLKPENLLLDDNLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPE-VING 181
Query: 266 --YLSVKTDVFSYGVLVLEIVSGRKNHD 291
Y + DV+S G+++ ++ GR D
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 22/206 (10%)
Query: 93 QLGHGGFGPVYRGLMP-NGQEIAVK-----KLSVDSRQGL--REFTNEVKLLLKIQHKNL 144
+LG G F V + G+E A K +LS SR+G+ E EV +L +I+H N+
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNI 70
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+TL + +L+ E + L F+ +K +S + D T++ + + G+ YLH +
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQF--LKQILDGVHYLHSK 127
Query: 205 APARIIHRDIKASNI-LLDEQL-NPKIS--DFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
RI H D+K NI LLD+ + NP+I DFG+A + N F GT ++APE
Sbjct: 128 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 181
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSG 286
+ L ++ D++S GV+ ++SG
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + L+ +G G +G V + +G +IAVKKLS S + E++L
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P SL+ F + + K L
Sbjct: 104 LKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKL 151
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 152 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 208
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + ++ D++S G ++ E+++GR
Sbjct: 209 TGY-----VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 187 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 22/206 (10%)
Query: 93 QLGHGGFGPVYRGLMP-NGQEIAVK-----KLSVDSRQGL--REFTNEVKLLLKIQHKNL 144
+LG G F V + G+E A K +LS SR+G+ E EV +L +I+H N+
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNI 77
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+TL + +L+ E + L F+ +K +S + D T++ + + G+ YLH +
Sbjct: 78 ITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQF--LKQILDGVHYLHSK 134
Query: 205 APARIIHRDIKASNI-LLDEQL-NPKIS--DFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
RI H D+K NI LLD+ + NP+I DFG+A + N F GT ++APE
Sbjct: 135 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPE 188
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSG 286
+ L ++ D++S GV+ ++SG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 187 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
F ++ +G GGFG V++ +G+ +K++ ++ + RE VK L K+ H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVH 68
Query: 147 LFGCCA---EGPEK-------------MLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRI 190
GC PE + E+ +L+ +I +K + LD +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALEL 127
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ +G+ Y+H + ++I+RD+K SNI L + KI DFGL + R
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX---RS 181
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
GT YM+PE + D+++ G+++ E++
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLDYL 173
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 234 RDLIS-RLLKHNPSQRPM 250
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 184
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 185 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 110/260 (42%), Gaps = 22/260 (8%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPG--EDTHVNTFRISGTHG 255
L Y H + R+IHRDIK N+LL KI+DFG + P DT + GT
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT------LCGTLD 172
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGE 312
Y+ PE K D++S GVL E + G+ + +E +S +T+ F E
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 313 KALELVDPSLAKCNRDEAAM 332
A +L+ L K N + M
Sbjct: 233 GARDLIS-RLLKHNPSQRPM 251
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 187 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSR-QGLREFTNEVKLLLKIQHKNLVTLFGCC 151
+G GGF V + G+ +A+K + ++ L E++ L ++H+++ L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 152 AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYR-IVMGVARGLLYLHEEAPARII 210
+ +V EY P L +I + + S + +R IV VA Y+H + A
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA----YVHSQGYA--- 130
Query: 211 HRDIKASNILLDEQLNPKISDFGL-ARLFPGEDTHVNTFRISGTHGYMAPEYAL-HGYLS 268
HRD+K N+L DE K+ DFGL A+ +D H+ T G+ Y APE YL
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT--CCGSLAYAAPELIQGKSYLG 188
Query: 269 VKTDVFSYGVLVLEIVSG 286
+ DV+S G+L+ ++ G
Sbjct: 189 SEADVWSMGILLYVLMCG 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL----DYFIFDKTKSSSLDWTTRYR-- 189
L ++H+N++ L + P +SL D ++ + L+ + +
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 190 -------IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 182 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+VA + +LG G FG VY +G++ + E V +V+ +RE F NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-------DKTKSSSLDWTTR 187
++ + ++V L G ++G +++ E + L ++ + + +
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
++ +A G+ YL+ + +HRD+ A N ++ E KI DFG+ R D
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 248 FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +M+PE G + +DV+S+GV++ EI +
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 182 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 173
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 234 RDLIS-RLLKHNPSQRPM 250
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYL 176
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 237 RDLIS-RLLKHNPSQRPM 253
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY----RGLMPNGQEIAVKKLSVDSRQGLRE---FTNEVK 134
+VA + +LG G FG VY +G++ + E V +V+ +RE F NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF-------DKTKSSSLDWTTR 187
++ + ++V L G ++G +++ E + L ++ + + +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNT 247
++ +A G+ YL+ + +HRD+ A N ++ E KI DFG+ R D
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 191
Query: 248 FRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ +M+PE G + +DV+S+GV++ EI +
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 135 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 191
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 192 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 182 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 135 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 191
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 192 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 86 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 134 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 190
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 191 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYL 175
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 236 RDLIS-RLLKHNPSQRPM 252
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 135 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 191
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 192 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 94 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 142 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 198
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 199 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 130 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 186
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 187 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYL 173
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 234 RDLIS-RLLKHNPSQRPM 250
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL----DYFIFDKTKSSSLDWTTRYR-- 189
L ++H+N++ L + P +SL D ++ + L+ + +
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 190 -------IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 124
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 177
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 238 RDLIS-RLLKHNPSQRPM 254
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 98 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 146 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 202
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 203 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 184
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 185 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 74 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 121
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 122 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 178
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 179 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGX-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 91 LNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
+ +LG G FG VY+ G A K + S + L ++ E+++L H +V L G
Sbjct: 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL----YLHEEA 205
+ ++ E+ P ++D + + LD + V R +L +LH +
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHSK- 136
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLA----RLFPGEDTHVNTFRISGTHGYMAPEY 261
RIIHRD+KA N+L+ + + +++DFG++ + D+ + GT +MAPE
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEV 188
Query: 262 ALHGYLS-----VKTDVFSYGVLVLEIVSGRKNH 290
+ + K D++S G+ ++E+ H
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 186 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 45/260 (17%)
Query: 56 AAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPV---YRGLMPNGQE 112
AA +A++ A S+++ FD+ + + + +G+G +G V R L GQ+
Sbjct: 30 AASVAAKNLALLKARSFDVTFDV------GDEYEIIETIGNGAYGVVSSARRRL--TGQQ 81
Query: 113 IAVKKL--SVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLD 170
+A+KK+ + D + E+K+L +H N++ + K ++ +P
Sbjct: 82 VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFK 132
Query: 171 --YFIFDKTKS-------SSLDWT---TRYRIVMGVARGLLYLHEEAPARIIHRDIKASN 218
Y + D +S SS T RY + + RGL Y+H A++IHRD+K SN
Sbjct: 133 SVYVVLDLMESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLKYMHS---AQVIHRDLKPSN 188
Query: 219 ILLDEQLNPKISDFGLAR---LFPGEDTHVNTFRISGTHGYMAPE--YALHGYLSVKTDV 273
+L++E KI DFG+AR P E + T ++ T Y APE +LH Y D+
Sbjct: 189 LLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRAPELMLSLHEYTQA-IDL 246
Query: 274 FSYGVLVLEIVSGRKNHDGR 293
+S G + E+++ R+ G+
Sbjct: 247 WSVGCIFGEMLARRQLFPGK 266
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 91 LNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
+ +LG G FG VY+ G A K + S + L ++ E+++L H +V L G
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL----YLHEEA 205
+ ++ E+ P ++D + + LD + V R +L +LH +
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHSK- 128
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLA----RLFPGEDTHVNTFRISGTHGYMAPEY 261
RIIHRD+KA N+L+ + + +++DFG++ + D+ + GT +MAPE
Sbjct: 129 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEV 180
Query: 262 ALHGYLS-----VKTDVFSYGVLVLEIVSGRKNH 290
+ + K D++S G+ ++E+ H
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 214
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 95 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 143 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 199
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 200 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 86 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 134 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 190
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 191 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 147 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 199
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 260 RDLIS-RLLKHNPSQRPM 276
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 184
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 185 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 176
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 237 RDLIS-RLLKHNPSQRPM 253
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 186 T-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTH 254
L Y H + R+IHRDIK N+LL KI+DFG + H + R + GT
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTL 173
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQG 311
Y+ PE K D++S GVL E + G+ + +E +S +T+ F
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 312 EKALELVDPSLAKCNRDEAAM 332
E A +L+ L K N + M
Sbjct: 234 EGARDLIS-RLLKHNPSQRPM 253
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 178
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 239 RDLIS-RLLKHNPSQRPM 255
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 128 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 184
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 185 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 119 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 176 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTH 254
L Y H + R+IHRDIK N+LL KI+DFG + H + R + GT
Sbjct: 147 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTL 196
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQG 311
Y+ PE K D++S GVL E + G+ + +E +S +T+ F
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 256
Query: 312 EKALELVDPSLAKCNRDEAAM 332
E A +L+ L K N + M
Sbjct: 257 EGARDLIS-RLLKHNPSQRPM 276
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL----DYFIFDKTKSSSLDWTTRYR-- 189
L ++H+N++ L + P +SL D ++ + L+ + +
Sbjct: 73 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 120
Query: 190 -------IVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 121 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 177
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 178 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 120 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 176
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 177 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLDYL 173
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 234 RDLIS-RLLKHNPSQRPM 250
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 120 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 176
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 177 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 119
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 120 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 172
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 232
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 233 RDLIS-RLLKHNPSQRPM 249
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTH 254
L Y H + R+IHRDIK N+LL KI+DFG + H + R + GT
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTL 175
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQG 311
Y+ PE K D++S GVL E + G+ + +E +S +T+ F
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 235
Query: 312 EKALELVDPSLAKCNRDEAAM 332
E A +L+ L K N + M
Sbjct: 236 EGARDLIS-RLLKHNPSQRPM 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYL 173
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 234 RDLIS-RLLKHNPSQRPM 250
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 105/246 (42%), Gaps = 18/246 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLLKIQHKNLVTLFG 149
LG G FG VY + I K+ + + G+ + EV++ ++H N++ L+G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ L+ EY P L + K S D + +A L Y H + R+
Sbjct: 93 YFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RV 146
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRDIK N+LL KI+DFG + P + GT Y+ PE
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEGRMHDE 202
Query: 270 KTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKALELVDPSLAKCN 326
K D++S GVL E + G+ + +E +S +T+ F E A +L+ L K N
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS-RLLKHN 261
Query: 327 RDEAAM 332
+ M
Sbjct: 262 PSQRPM 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTH 254
L Y H + R+IHRDIK N+LL KI+DFG + H + R + GT
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTL 171
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQG 311
Y+ PE K D++S GVL E + G+ + +E +S +T+ F
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 231
Query: 312 EKALELVDPSLAKCNRDEAAM 332
E A +L+ L K N + M
Sbjct: 232 EGARDLIS-RLLKHNPSQRPM 251
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 103/244 (42%), Gaps = 17/244 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 178
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 179 PPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 315 LELV 318
+L+
Sbjct: 239 RDLI 242
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLDYL 176
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 237 RDLIS-RLLKHNPSQRPM 253
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTH 254
L Y H + R+IHRDIK N+LL KI+DFG + H + R + GT
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTL 170
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQG 311
Y+ PE K D++S GVL E + G+ + +E +S +T+ F
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 312 EKALELVDPSLAKCNRDEAAM 332
E A +L+ L K N + M
Sbjct: 231 EGARDLIS-RLLKHNPSQRPM 250
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE-IAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLVTLFGCC 151
LG G F V Q+ +A+K ++ ++ +G NE+ +L KI+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 152 AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTR--YRIVMGVARGLLYLHEEAPARI 209
G L+ + + L FD+ +T R R++ V + YLH+ I
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLG---I 137
Query: 210 IHRDIKASNIL---LDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
+HRD+K N+L LDE ISDFGL+++ ED GT GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 267 LSVKTDVFSYGVLVLEIVSG 286
S D +S GV+ ++ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 176
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 237 RDLIS-RLLKHNPSQRPM 253
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQE-IAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLVTLFGCC 151
LG G F V Q+ +A+K ++ ++ +G NE+ +L KI+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 152 AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIH 211
G L+ + + L I +K + D + R++ V + YLH+ I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQVLDAVKYLHDLG---IVH 139
Query: 212 RDIKASNIL---LDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
RD+K N+L LDE ISDFGL+++ ED GT GY+APE S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 269 VKTDVFSYGVLVLEIVSG 286
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQE-IAVKKLSVDSRQGLR-EFTNEVKLLLKIQHKNLVTLFGCC 151
LG G F V Q+ +A+K ++ ++ +G NE+ +L KI+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 152 AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIH 211
G L+ + + L I +K + D + R++ V + YLH+ I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQVLDAVKYLHDLG---IVH 139
Query: 212 RDIKASNIL---LDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
RD+K N+L LDE ISDFGL+++ ED GT GY+APE S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 269 VKTDVFSYGVLVLEIVSG 286
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 24/261 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTH 254
L Y H + R+IHRDIK N+LL KI+DFG + H + R + GT
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTL 170
Query: 255 GYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQG 311
Y+ PE K D++S GVL E + G+ + +E +S +T+ F
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 230
Query: 312 EKALELVDPSLAKCNRDEAAM 332
E A +L+ L K N + M
Sbjct: 231 EGARDLIS-RLLKHNPSQRPM 250
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 107/260 (41%), Gaps = 22/260 (8%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLR------EFTNEVKL 135
Q A F LG G FG VY L Q + L V + L + EV++
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVY--LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEI 58
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVA 195
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 59 QSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELA 115
Query: 196 RGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHG 255
L Y H + R+IHRDIK N+LL KI+DFG + P + GT
Sbjct: 116 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLD 168
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGE 312
Y+ PE K D++S GVL E + G+ + +E +S +T+ F E
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
Query: 313 KALELVDPSLAKCNRDEAAM 332
A +L+ L K N + M
Sbjct: 229 GARDLIS-RLLKHNPSQRPM 247
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 125 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM 181
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 182 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P + + K S D + +A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEV---YKELQKLSKFDEQRTATYITELANA 125
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLXGTLDYL 178
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 239 RDLIS-RLLKHNPSQRPM 255
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + KS L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGL R E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 94 LGHGGFGPVYRGLMPN--GQEI--AVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
LG G FG VY G+ N G++I AVK D +E F +E ++ + H ++V L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E P L +++ + +SL T + + + + YL
Sbjct: 80 GIIEEEP-TWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 133
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRDI NIL+ K+ DFGL+R ED ++ S T +M+PE
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED----YYKASVTRLPIKWMSPESINFR 189
Query: 266 YLSVKTDVFSYGVLVLEIVS 285
+ +DV+ + V + EI+S
Sbjct: 190 RFTTASDVWMFAVCMWEILS 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P + + K S D + +A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEV---YKELQKLSKFDEQRTATYITELANA 125
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL 178
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 239 RDLIS-RLLKHNPSQRPM 255
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE-IAVK---KLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
LG G F V Q+ +A+K K +++ ++G E NE+ +L KI+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAVLHKIKHPNIVALDD 83
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
G L+ + + L I +K + D + R++ V + YLH+ I
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RLIFQVLDAVKYLHDLG---I 137
Query: 210 IHRDIKASNIL---LDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGY 266
+HRD+K N+L LDE ISDFGL+++ ED GT GY+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 267 LSVKTDVFSYGVLVLEIVSG 286
S D +S GV+ ++ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 212 XKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 98 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR
Sbjct: 146 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----H 197
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 198 TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DFGLAR E
Sbjct: 129 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM 185
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 186 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 153
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 213 CKSSDLWALGCIIYQLVAG 231
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQ----EIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
LG G FG VY G+ N + +AVK D +E F +E ++ + H ++V L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E P L +++ + +SL T + + + + YL
Sbjct: 76 GIIEEEP-TWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 129
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRDI NIL+ K+ DFGL+R ED ++ S T +M+PE
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED----YYKASVTRLPIKWMSPESINFR 185
Query: 266 YLSVKTDVFSYGVLVLEIVS 285
+ +DV+ + V + EI+S
Sbjct: 186 RFTTASDVWMFAVCMWEILS 205
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 18/240 (7%)
Query: 55 RAAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDL----NQLGHGGFGPVYRGL-MPN 109
R G + + D D W ++ + +++ + D +LG G FG V+R
Sbjct: 17 RGKGTVSSNYDNYVFDIWKQYYP-QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERAT 75
Query: 110 GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL 169
G A K + E++ + ++H LV L + E +++YE++ L
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
Query: 170 DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP-- 227
+ D+ S D Y + V +GL ++HE +H D+K NI+ + +
Sbjct: 136 FEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNEL 190
Query: 228 KISDFGL-ARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
K+ DFGL A L P + V T GT + APE A + TD++S GVL ++SG
Sbjct: 191 KLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQ----EIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
LG G FG VY G+ N + +AVK D +E F +E ++ + H ++V L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E P L +++ + +SL T + + + + YL
Sbjct: 92 GIIEEEP-TWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 145
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTH---GYMAPEYALHG 265
+HRDI NIL+ K+ DFGL+R ED ++ S T +M+PE
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED----YYKASVTRLPIKWMSPESINFR 201
Query: 266 YLSVKTDVFSYGVLVLEIVS 285
+ +DV+ + V + EI+S
Sbjct: 202 RFTTASDVWMFAVCMWEILS 221
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY N + I K+ + + G+ + EV++
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + ++IHRDIK N+LL KI+DFG + P + GT Y+
Sbjct: 121 LSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYL 173
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + ++ +S +T+ F E A
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA 233
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 234 RDLIS-RLLKHNPSQRPM 250
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 18/240 (7%)
Query: 55 RAAGESAEDADGSGADSWNLFFDLRTLQVATNFFSDL----NQLGHGGFGPVYRGL-MPN 109
R G + + D D W ++ + +++ + D +LG G FG V+R
Sbjct: 123 RGKGTVSSNYDNYVFDIWKQYYP-QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERAT 181
Query: 110 GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL 169
G A K + E++ + ++H LV L + E +++YE++ L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 170 DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP-- 227
+ D+ S D Y + V +GL ++HE +H D+K NI+ + +
Sbjct: 242 FEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNEL 296
Query: 228 KISDFGL-ARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
K+ DFGL A L P + V T GT + APE A + TD++S GVL ++SG
Sbjct: 297 KLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 153
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 213 CKSSDLWALGCIIYQLVAG 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 35/283 (12%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKL--SVDSRQGLREFTNEVKL 135
+ +V + + +LG G +G V + +P+GQ +AVK++ +V+S++ R +
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF---IFDKTKSSSLDWTTRYRIVM 192
+ + VT +G + + E + + SLD F + DK ++ D + I +
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAV 160
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+ + L +LH + +IHRD+K SN+L++ K+ DFG++ D+ T +G
Sbjct: 161 SIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTID-AG 215
Query: 253 THGYMAPEYA-----LHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTW- 306
YMAPE GY SVK+D++S G+ ++E+ R +D +W
Sbjct: 216 CKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-------------SWG 261
Query: 307 TLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
T FQ K + + +PS +A + C +++ ERP
Sbjct: 262 TPFQQLKQV-VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 303
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 212 CKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 155
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 156 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 215 CKSSDLWALGCIIYQLVAG 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 128
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 129 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 188 CKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 127
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 128 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 187 CKSSDLWALGCIIYQLVAG 205
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI D+GLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 134
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 135 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 194 CKSSDLWALGCIIYQLVAG 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 129
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 130 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 189 CKSSDLWALGCIIYQLVAG 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 149
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 209 CKSSDLWALGCIIYQLVAG 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 130
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 131 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 190 CKSSDLWALGCIIYQLVAG 208
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 29/213 (13%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKL-SVDSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
+ Q+G G +G V+ G G+++AVK + + RE E+ + ++H+N++
Sbjct: 42 VKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIA 98
Query: 150 CCAEGP----EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE- 204
+G + L+ +Y N SL +D KS++LD + ++ GL +LH E
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 205 -----APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN---TFRISGTHGY 256
PA I HRD+K+ NIL+ + I+D GLA F + V+ R+ GT Y
Sbjct: 155 FSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 257 MAPEY------ALHGYLSVKTDVFSYGVLVLEI 283
M PE H + D++S+G+++ E+
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 149
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 209 CKSSDLWALGCIIYQLVAG 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
L +G G +G V+RG G+ +AVK S D + RE E+ + ++H+N++
Sbjct: 42 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIA 98
Query: 150 CCA----EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE- 204
+ L+ Y SL +D + ++LD + RIV+ +A GL +LH E
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 205 -----APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV---NTFRISGTHGY 256
PA I HRD+K+ NIL+ + I+D GLA + + N R+ GT Y
Sbjct: 155 FGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 212
Query: 257 MAPEYALHGYLSV-------KTDVFSYGVLVLEI 283
MAPE L + V + D++++G+++ E+
Sbjct: 213 MAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
L +G G +G V+RG G+ +AVK S D + RE E+ + ++H+N++
Sbjct: 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIA 69
Query: 150 CCA----EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE- 204
+ L+ Y SL +D + ++LD + RIV+ +A GL +LH E
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 205 -----APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV---NTFRISGTHGY 256
PA I HRD+K+ NIL+ + I+D GLA + + N R+ GT Y
Sbjct: 126 FGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 183
Query: 257 MAPEYALHGYLSV-------KTDVFSYGVLVLEI 283
MAPE L + V + D++++G+++ E+
Sbjct: 184 MAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 91 LNQLGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
L +G G +G V+RG G+ +AVK S D + RE E+ + ++H+N++
Sbjct: 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIA 69
Query: 150 CCA----EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE- 204
+ L+ Y SL +D + ++LD + RIV+ +A GL +LH E
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 205 -----APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV---NTFRISGTHGY 256
PA I HRD+K+ NIL+ + I+D GLA + + N R+ GT Y
Sbjct: 126 FGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 183
Query: 257 MAPEYALHGYLSV-------KTDVFSYGVLVLEI 283
MAPE L + V + D++++G+++ E+
Sbjct: 184 MAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
F ++ +G GGFG V++ +G+ ++++ ++ + RE VK L K+ H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVH 69
Query: 147 LFGC-----------------CAEGPEK------------MLVYEYLPNKSLDYFIFDKT 177
GC PE + E+ +L+ +I +K
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKR 128
Query: 178 KSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARL 237
+ LD + + +G+ Y+H + ++IHRD+K SNI L + KI DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 238 FPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
+ R GT YM+PE + D+++ G+++ E++
Sbjct: 186 LKNDGKRT---RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 94 LGHGGFGP-VYRGLMPNGQEIAVKKLSVDSRQGLRE-----FTNEVKLLLKIQHKNLVTL 147
LG G F V + +E A+K L + R ++E T E ++ ++ H V L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 148 FGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
+ + + Y N L +I K S D T + L YLH +
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IIHRD+K NILL+E ++ +I+DFG A++ E GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+D+++ G ++ ++V+G
Sbjct: 210 CKSSDLWALGCIIYQLVAG 228
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI++FG + P + GT Y+
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYL 175
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 236 RDLIS-RLLKHNPSQRPM 252
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKK-LSVDSRQGLREFTNEVKLLLKIQHKNL 144
+F+ + +LG G FG VY+ +A K + S + L ++ E+ +L H N+
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLHE 203
V L ++ E+ ++D + + + + ++ ++V L YLH+
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHD 153
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS--GTHGYMAPEY 261
+IIHRD+KA NIL + K++DFG++ ++T R S GT +MAPE
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEV 206
Query: 262 ALHGY-----LSVKTDVFSYGVLVLEIVSGRKNH 290
+ K DV+S G+ ++E+ H
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLL 137
Q A F LG G FG VY + I K+ + + G+ + EV++
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
++H N++ L+G + L+ EY P L + K S D + +A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L Y H + R+IHRDIK N+LL KI++FG + P + GT Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYL 176
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKA 314
PE K D++S GVL E + G+ + +E +S +T+ F E A
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 315 LELVDPSLAKCNRDEAAM 332
+L+ L K N + M
Sbjct: 237 RDLIS-RLLKHNPSQRPM 253
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI DF LAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 129 FTNEVKLLLKIQHKNLVTLFGCCAEGPEKML--VYEYLPNKSLDYFIFDKTKSSS-LDWT 185
+EV LL +++H N+V + + L V EY L I TK LD
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 186 TRYRIVMGVARGLLYLHEEAPA--RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDT 243
R++ + L H + ++HRD+K +N+ LD + N K+ DFGLAR+ + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 244 HVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
TF GT YM+PE + K+D++S G L+ E+ +
Sbjct: 172 FAKTF--VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 80 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 94 LGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQG----LREFTNEVKLLLKIQHKNLVTL 147
LG GG V+ R L + +++AVK L D + LR F E + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLR-DHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV 77
Query: 148 FGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ GP +V EY+ +L + + + ++ + L + H+
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ 134
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV-NTFRISGTHGYMAPEYA 262
IIHRD+K +NIL+ K+ DFG+AR V T + GT Y++PE A
Sbjct: 135 NG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+ ++DV+S G ++ E+++G G
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGLMPN-GQEIAVK---KLSVDSRQGLREFTNEVKL 135
+ + N FS +G GGFG VY + G+ A+K K + +QG NE ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RI 241
Query: 136 LLKIQHKNLVTLFGCCAEG---PEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+L + C + P+K+ + + + L Y + S D R+
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRF-YA 298
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
+ GL ++H +++RD+K +NILLDE + +ISD GLA F + H +
Sbjct: 299 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 351
Query: 252 GTHGYMAPEYALHGY-LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQ 310
GTHGYMAPE G D FS G ++ +++ G K+K ++ T T+
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-- 409
Query: 311 GEKALELVD 319
A+EL D
Sbjct: 410 ---AVELPD 415
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 35/282 (12%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKL--SVDSRQGLREFTNEVKLL 136
+++V + + +LG G +G V + +P+GQ +AVK++ +V+S++ R + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 137 LKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF---IFDKTKSSSLDWTTRYRIVMG 193
+ VT +G + + E + + SLD F + DK ++ D + I +
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVS 117
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+ + L +LH + +IHRD+K SN+L++ K+ DFG++ + V +G
Sbjct: 118 IVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGC 172
Query: 254 HGYMAPEYA-----LHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTW-T 307
YMAPE GY SVK+D++S G+ ++E+ R +D +W T
Sbjct: 173 KPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-------------SWGT 218
Query: 308 LFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
FQ K + + +PS +A + C +++ ERP
Sbjct: 219 PFQQLKQV-VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 259
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPK----ISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ PK I DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGLMPN-GQEIAVK---KLSVDSRQGLREFTNEVKL 135
+ + N FS +G GGFG VY + G+ A+K K + +QG NE ++
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RI 240
Query: 136 LLKIQHKNLVTLFGCCAEG---PEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+L + C + P+K+ + + + L Y + S D R+
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRF-YA 297
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
+ GL ++H +++RD+K +NILLDE + +ISD GLA F + H +
Sbjct: 298 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 350
Query: 252 GTHGYMAPEYALHGY-LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQ 310
GTHGYMAPE G D FS G ++ +++ G K+K ++ T T+
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-- 408
Query: 311 GEKALELVD 319
A+EL D
Sbjct: 409 ---AVELPD 414
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 81 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKK-LSVDSRQGLREFTNEVKLLLKIQHKNL 144
+F+ + +LG G FG VY+ +A K + S + L ++ E+ +L H N+
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLHE 203
V L ++ E+ ++D + + + + ++ ++V L YLH+
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHD 153
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS--GTHGYMAPEY 261
+IIHRD+KA NIL + K++DFG++ ++T R S GT +MAPE
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEV 206
Query: 262 ALHGY-----LSVKTDVFSYGVLVLEIVSGRKNH 290
+ K DV+S G+ ++E+ H
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 83 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 106 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 219 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGLMPN-GQEIAVK---KLSVDSRQGLREFTNEVKL 135
+ + N FS +G GGFG VY + G+ A+K K + +QG NE ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RI 241
Query: 136 LLKIQHKNLVTLFGCCAEG---PEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+L + C + P+K+ + + + L Y + S D R+
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRF-YA 298
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
+ GL ++H +++RD+K +NILLDE + +ISD GLA F + H +
Sbjct: 299 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 351
Query: 252 GTHGYMAPEYALHGY-LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQ 310
GTHGYMAPE G D FS G ++ +++ G K+K ++ T T+
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-- 409
Query: 311 GEKALELVD 319
A+EL D
Sbjct: 410 ---AVELPD 415
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGLMPN-GQEIAVK---KLSVDSRQGLREFTNEVKL 135
+ + N FS +G GGFG VY + G+ A+K K + +QG NE ++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RI 241
Query: 136 LLKIQHKNLVTLFGCCAEG---PEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
+L + C + P+K+ + + + L Y + S D R+
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD--MRF-YA 298
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
+ GL ++H +++RD+K +NILLDE + +ISD GLA F + H +
Sbjct: 299 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---- 351
Query: 252 GTHGYMAPEYALHGY-LSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQ 310
GTHGYMAPE G D FS G ++ +++ G K+K ++ T T+
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-- 409
Query: 311 GEKALELVD 319
A+EL D
Sbjct: 410 ---AVELPD 415
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLLKIQHKNLVTLFG 149
LG G FG VY + I K+ + + G+ + EV++ ++H N++ L+G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ L+ EY P L + K S D + +A L Y H + R+
Sbjct: 80 YFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RV 133
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPG--EDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRDIK N+LL KI+DFG + P DT + GT Y+ PE
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT------LCGTLDYLPPEMIEGRMH 187
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKALELV 318
K D++S GVL E + G + +E +S +T+ F E A +L+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLI 241
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 75 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 88 FSDLNQLGHGGFGPVY---RGLMPNGQEI----AVKKLSVDSRQGLREFTNEVKLLLKIQ 140
F L LG G FG V+ + P+ + +KK ++ R +R E +L +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLL 199
H +V L + L+ ++L L F + + + + +A GL
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALGLD 144
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
+LH II+RD+K NILLDE+ + K++DFGL++ D + GT YMAP
Sbjct: 145 HLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAP 199
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
E S D +SYGVL+ E+++G G+ KE L+
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 94 LGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQG----LREFTNEVKLLLKIQHKNLVTL 147
LG GG V+ R L + +++AVK L D + LR F E + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLR-DHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV 77
Query: 148 FGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ GP +V EY+ +L + + + ++ + L + H+
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ 134
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN-TFRISGTHGYMAPEYA 262
IIHRD+K +NI++ K+ DFG+AR V T + GT Y++PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+ ++DV+S G ++ E+++G G
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 17/232 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLLKIQHKNLVTLFG 149
LG G FG VY + I K+ + + G+ + EV++ ++H N++ L+G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ L+ EY P L + K S D + +A L Y H + R+
Sbjct: 80 YFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RV 133
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRDIK N+LL KI+DFG + P + GT Y+ PE
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEMIEGRMHDE 189
Query: 270 KTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLS---YTWTLFQGEKALELV 318
K D++S GVL E + G + +E +S +T+ F E A +L+
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLI 241
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVK--------KLSVDSRQGLREFT-NEVKLLLKIQ-HK 142
LG G V R + P +E AVK S + Q LRE T EV +L K+ H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
N++ L LV++ + L DY T+ +L +I+ + + L
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICAL 127
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPE 260
H+ I+HRD+K NILLD+ +N K++DFG + +L PGE + GT Y+APE
Sbjct: 128 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYLAPE 180
Query: 261 YAL------HGYLSVKTDVFSYGVLVLEIVSG 286
H + D++S GV++ +++G
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 94 LGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQG----LREFTNEVKLLLKIQHKNLVTL 147
LG GG V+ R L + +++AVK L D + LR F E + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLR-DHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV 77
Query: 148 FGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ GP +V EY+ +L + + + ++ + L + H+
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ 134
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN-TFRISGTHGYMAPEYA 262
IIHRD+K +NI++ K+ DFG+AR V T + GT Y++PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+ ++DV+S G ++ E+++G G
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI D GLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 91 LNQLGHGGFGPVYRGLMPN-GQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNLVTL 147
L +G G +G V Q++AVKKLS S R E++LL ++H+N++ L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 148 FGCCAEGPEKMLVYE-YLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
E YL + + + KS +L +V + RGL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS--- 149
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG- 265
A IIHRD+K SN+ ++E +I DFGLAR E T T Y APE L+
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY-----VATRWYRAPEIMLNWM 204
Query: 266 YLSVKTDVFSYGVLVLEIVSGR 287
+ + D++S G ++ E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 94 LGHGGFGPVYRG-LMPNGQEIAVKKLSVDS--RQGLREFTNEVKLLLKI--QHKNLVTLF 148
LG G FG V+ Q A+K L D E T K +L + +H L +F
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 149 GCCAEGPEKML-VYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
C + E + V EYL L Y I D + + GL +LH +
Sbjct: 85 -CTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQFLHSKG-- 138
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
I++RD+K NILLD+ + KI+DFG+ + D N F GT Y+APE L
Sbjct: 139 -IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF--CGTPDYIAPEILLGQKY 195
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ D +S+GVL+ E++ G+ G+ +E
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI FGLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 16/227 (7%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNG--------QEIAVKKLSVDSRQGLREFTNEV 133
++ F L LG GG+G V++ G ++ K + V + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
+L +++H +V L G + L+ EYL L + ++ D Y +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAEIS 131
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+A G +LH++ II+RD+K NI+L+ Q + K++DFGL + + T +TF GT
Sbjct: 132 MALG--HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF--CGT 184
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKAD 300
YMAPE + + D +S G L+ ++++G G K+ D
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKK-LSVDSRQGLREFTNEVKLLLKIQHKNL 144
+F+ + +LG G FG VY+ +A K + S + L ++ E+ +L H N+
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLHE 203
V L ++ E+ ++D + + + + ++ ++V L YLH+
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHD 153
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLA----RLFPGEDTHVNTFRISGTHGYMAP 259
+IIHRD+KA NIL + K++DFG++ R D + GT +MAP
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAP 204
Query: 260 EYALHGY-----LSVKTDVFSYGVLVLEIVSGRKNH 290
E + K DV+S G+ ++E+ H
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVK--------KLSVDSRQGLREFT-NEVKLLLKIQ-HK 142
LG G V R + P +E AVK S + Q LRE T EV +L K+ H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
N++ L LV++ + L DY T+ +L +I+ + + L
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICAL 140
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPE 260
H+ I+HRD+K NILLD+ +N K++DFG + +L PGE + GT Y+APE
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYLAPE 193
Query: 261 YAL------HGYLSVKTDVFSYGVLVLEIVSG 286
H + D++S GV++ +++G
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 94 LGHGGFGPVYRG-LMPNGQEIAVKKLSVDS--RQGLREFTNEVKLLLKI--QHKNLVTLF 148
LG G FG V+ Q A+K L D E T K +L + +H L +F
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 149 GCCAEGPEKML-VYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPA 207
C + E + V EYL L Y I D + + GL +LH +
Sbjct: 86 -CTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQFLHSKG-- 139
Query: 208 RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
I++RD+K NILLD+ + KI+DFG+ + D N F GT Y+APE L
Sbjct: 140 -IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF--CGTPDYIAPEILLGQKY 196
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ D +S+GVL+ E++ G+ G+ +E
Sbjct: 197 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI D GLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVK--------KLSVDSRQGLREFT-NEVKLLLKIQ-HK 142
LG G V R + P +E AVK S + Q LRE T EV +L K+ H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
N++ L LV++ + L DY T+ +L +I+ + + L
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICAL 140
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPE 260
H+ I+HRD+K NILLD+ +N K++DFG + +L PGE + GT Y+APE
Sbjct: 141 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----SVCGTPSYLAPE 193
Query: 261 YAL------HGYLSVKTDVFSYGVLVLEIVSG 286
H + D++S GV++ +++G
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T + +MAPE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLREFTNEVKLLLK 138
+L+ A++F ++ LG G FG V + + + A+KK+ + + L +EV LL
Sbjct: 1 SLRYASDF-EEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLAS 58
Query: 139 IQHKNLVTLFGCCAE-------------GPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT 185
+ H+ +V + E + EY N++L I + + D
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD-- 116
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--------- 236
+R+ + L Y+H + IIHRD+K NI +DE N KI DFGLA+
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 237 -----LFPGEDTHVNTFRISGTHGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIV 284
PG ++ + GT Y+A E G+ + K D++S G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTS--AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 125
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 126 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 179
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 94 LGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQG----LREFTNEVKLLLKIQHKNLVTL 147
LG GG V+ R L + +++AVK L D + LR F E + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLH-RDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV 77
Query: 148 FGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ GP +V EY+ +L + + + ++ + L + H+
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ 134
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN-TFRISGTHGYMAPEYA 262
IIHRD+K +NI++ K+ DFG+AR V T + GT Y++PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+ ++DV+S G ++ E+++G G
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQE----IAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLVTLF 148
+G G FG V++G+ + + +A+K + +RE F E + + H ++V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPAR 208
G E P ++ E L F+ + + SLD + ++ L YL + R
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
+HRDI A N+L+ K+ DFGL+R + + T+ + +MAPE +
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 269 VKTDVFSYGVLVLEIV-------SGRKNHD--GRL 294
+DV+ +GV + EI+ G KN+D GR+
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 125
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 126 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 179
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 93 QLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQ-GLREFTNEVKLLLKIQHKNLVTLFGC 150
+LG G FG V+ +G E +K ++ D Q + + E+++L + H N++ +F
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 151 CAEGPEKMLVYEYLPN-KSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E + L+ + + + +L ++ + L Y H + +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HV 145
Query: 210 IHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
+H+D+K NIL + +P KI DFGLA LF ++ N +GT YMAPE
Sbjct: 146 VHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKSDEHSTNA---AGTALYMAPE-VFKR 200
Query: 266 YLSVKTDVFSYGVLVLEIVSG 286
++ K D++S GV++ +++G
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTG 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 79 RTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKL 135
+T+ + +L+ +G G +G V G +AVKKLS S + E++L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 136 LLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF-------------IFDKTKSSSL 182
L ++H+N++ L + P +SL+ F + + K L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGED 242
++ + RGL Y+H A IIHRD+K SN+ ++E KI D GLAR E
Sbjct: 123 TDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM 179
Query: 243 THVNTFRISGTHGYMAPEYALHG-YLSVKTDVFSYGVLVLEIVSGR 287
T T Y APE L+ + + D++S G ++ E+++GR
Sbjct: 180 TGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 92 NQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLR------EFTNEVKLLLKIQHKNL 144
+ LG G FG V G G ++AVK L+ RQ +R + E++ L +H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L+ + + +V EY+ L +I K ++ R+ + + Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
++HRD+K N+LLD +N KI+DFGL+ + + ++ G+ Y APE +
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPE-VIS 183
Query: 265 G--YLSVKTDVFSYGVLVLEIVSG 286
G Y + D++S GV++ ++ G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 92 NQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLR------EFTNEVKLLLKIQHKNL 144
+ LG G FG V G G ++AVK L+ RQ +R + E++ L +H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L+ + + +V EY+ L +I K ++ R+ + + Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFP-GEDTHVNTFRISGTHGYMAPEYAL 263
++HRD+K N+LLD +N KI+DFGL+ + GE + G+ Y APE +
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS----CGSPNYAAPE-VI 182
Query: 264 HG--YLSVKTDVFSYGVLVLEIVSG 286
G Y + D++S GV++ ++ G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 91 LNQLGHGGFGPVYRGLMPN-GQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNLVTL 147
L +G G +G V Q++AVKKLS S R E++LL ++H+N++ L
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 148 FGCCAEGPEKMLVYE-YLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
E YL + + + K +L +V + RGL Y+H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS--- 141
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG- 265
A IIHRD+K SN+ ++E +I DFGLAR E T T Y APE L+
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY-----VATRWYRAPEIMLNWM 196
Query: 266 YLSVKTDVFSYGVLVLEIVSGR 287
+ + D++S G ++ E++ G+
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 129 FTNEVKLLLKIQHKNLVTLFGCCAEGPEKML--VYEYLPNKSLDYFIFDKTKSSS-LDWT 185
+EV LL +++H N+V + + L V EY L I TK LD
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 186 TRYRIVMGVARGLLYLHEEAPA--RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDT 243
R++ + L H + ++HRD+K +N+ LD + N K+ DFGLAR+ + +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 244 HVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
F GT YM+PE + K+D++S G L+ E+ +
Sbjct: 172 FAKAF--VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 41/259 (15%)
Query: 56 AAGESAEDADGSGADSWNLFF-------DLRTLQVATNFFSDLNQ---LGHGGFGPVYRG 105
A + DA G + NL+F +L A F+ + +G G V R
Sbjct: 56 AEAKKLNDAQPKGTE--NLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRC 113
Query: 106 L-MPNGQEIAVK-------KLSVDSRQGLREFTN-EVKLLLKIQ-HKNLVTLFGCCAEGP 155
+ G E AVK +LS + + +RE T E +L ++ H +++TL
Sbjct: 114 VHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173
Query: 156 EKMLVYEYLPNKSL-DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDI 214
LV++ + L DY T+ +L I+ + + +LH I+HRD+
Sbjct: 174 FMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDL 226
Query: 215 KASNILLDEQLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEY------ALHGYL 267
K NILLD+ + ++SDFG + L PGE + GT GY+APE H
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEKLR----ELCGTPGYLAPEILKCSMDETHPGY 282
Query: 268 SVKTDVFSYGVLVLEIVSG 286
+ D+++ GV++ +++G
Sbjct: 283 GKEVDLWACGVILFTLLAG 301
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
VARG+ +L + + IHRD+ A NILL E KI DFGLAR +V
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE S K+DV+SYGVL+ EI S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 19/227 (8%)
Query: 65 DGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSR 123
+G + SW + + F LG G F V G+ AVK + +
Sbjct: 6 NGESSSSWK-----KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 60
Query: 124 QGLRE-FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL 182
+G NE+ +L KI+H+N+V L LV + + L I +K +
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK 120
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILL---DEQLNPKISDFGLARLFP 239
D +T R V+ + YLH I+HRD+K N+L DE+ ISDFGL+++
Sbjct: 121 DASTLIRQVLD---AVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM-E 173
Query: 240 GEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
G+ ++T GT GY+APE S D +S GV+ ++ G
Sbjct: 174 GKGDVMST--ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 129 FTNEVKLLLKIQHKNLVTLFGCCAEGPEKML--VYEYLPNKSLDYFIFDKTKSSS-LDWT 185
+EV LL +++H N+V + + L V EY L I TK LD
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 186 TRYRIVMGVARGLLYLHEEAPA--RIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDT 243
R++ + L H + ++HRD+K +N+ LD + N K+ DFGLAR+ ++
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 244 HVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
F GT YM+PE + K+D++S G L+ E+ +
Sbjct: 172 FAKEF--VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNL 144
+ L ++G G FG V++ GQ++A+KK+ +++ + T E+K+L ++H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS----------SLDWTTRYRIVMGV 194
V L C + Y K+ Y +FD + + R++ +
Sbjct: 80 VNLIEIC-----RTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP-GEDTHVNTF--RIS 251
GL Y+H +I+HRD+KA+N+L+ K++DFGLAR F +++ N + R+
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 252 GTHGYMAPEYAL 263
T Y PE L
Sbjct: 192 -TLWYRPPELLL 202
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 23/235 (9%)
Query: 60 SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQE---IAVK 116
+A A G+ + + + D ++FF ++LG G VYR Q+ + V
Sbjct: 27 TASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86
Query: 117 KLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDK 176
K +VD + E+ +LL++ H N++ L E LV E + L I +K
Sbjct: 87 KKTVDKKI----VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK 142
Query: 177 TKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILL-----DEQLNPKISD 231
S D + ++ + YLHE I+HRD+K N+L D L KI+D
Sbjct: 143 GYYSERDAADAVKQIL---EAVAYLHENG---IVHRDLKPENLLYATPAPDAPL--KIAD 194
Query: 232 FGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
FGL+++ + V + GT GY APE + D++S G++ ++ G
Sbjct: 195 FGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ P KI DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 64 ADGSGADSWNLFFDLRTLQ---VATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLS 119
AD + +N F + L+ V N F LG GGFG V + G+ A KKL
Sbjct: 159 ADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLE 218
Query: 120 VDSRQ---GLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDK 176
+ G NE ++L K+ + +V+L LV + L + I+
Sbjct: 219 KKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM 278
Query: 177 TKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR 236
++ + + + GL LH E RI++RD+K NILLD+ + +ISD GLA
Sbjct: 279 GQAGFPEARAVF-YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAV 334
Query: 237 LFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGK 296
P T GT GYMAPE + + D ++ G L+ E+++G+ R K
Sbjct: 335 HVPEGQTIKGRV---GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
Query: 297 EKAD 300
K +
Sbjct: 392 IKRE 395
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 94 LGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQG----LREFTNEVKLLLKIQHKNLVTL 147
LG GG V+ R L + +++AVK L D + LR F E + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLH-RDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV 77
Query: 148 FGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ GP +V EY+ +L + + + ++ + L + H+
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ 134
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN-TFRISGTHGYMAPEYA 262
IIHRD+K +NI++ K+ DFG+AR V T + GT Y++PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+ ++DV+S G ++ E+++G G
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 64 ADGSGADSWNLFFDLRTLQ---VATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLS 119
AD + +N F + L+ V N F LG GGFG V + G+ A KKL
Sbjct: 159 ADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLE 218
Query: 120 VDSRQ---GLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDK 176
+ G NE ++L K+ + +V+L LV + L + I+
Sbjct: 219 KKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM 278
Query: 177 TKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR 236
++ + + + GL LH E RI++RD+K NILLD+ + +ISD GLA
Sbjct: 279 GQAGFPEARAVF-YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAV 334
Query: 237 LFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGK 296
P T GT GYMAPE + + D ++ G L+ E+++G+ R K
Sbjct: 335 HVPEGQTIKGRV---GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
Query: 297 EKAD 300
K +
Sbjct: 392 IKRE 395
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 91 LNQLGHGGFGPVYRGLMPN-GQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNLVTL 147
L +G G +G V Q++AVKKLS S R E++LL ++H+N++ L
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 148 FGCCAEGPEKMLVYE-YLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
E YL + + + K +L +V + RGL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS--- 149
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG- 265
A IIHRD+K SN+ ++E +I DFGLAR E T T Y APE L+
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY-----VATRWYRAPEIMLNWM 204
Query: 266 YLSVKTDVFSYGVLVLEIVSGR 287
+ + D++S G ++ E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGL--REFTNEVKLLL 137
+++ +LG G F V + GL + I K+ + SR+G+ + EV +L
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+IQH N++TL + +L+ E + L F+ +K SL + + G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK---ESLTEEEATEFLKQILNG 126
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPK----ISDFGLARLFPGEDTHVNTFRISGT 253
+ YLH +I H D+K NI+L ++ PK I DFGLA + N F GT
Sbjct: 127 VYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GT 180
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
++APE + L ++ D++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNL 144
+ L ++G G FG V++ GQ++A+KK+ +++ + T E+K+L ++H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS----------SLDWTTRYRIVMGV 194
V L C + Y K Y +FD + + R++ +
Sbjct: 80 VNLIEIC-----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF 238
GL Y+H +I+HRD+KA+N+L+ K++DFGLAR F
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 94 LGHGGFGPVY--RGLMPNGQEIAVKKLSVDSRQG----LREFTNEVKLLLKIQHKNLVTL 147
LG GG V+ R L + +++AVK L D + LR F E + + H +V +
Sbjct: 37 LGFGGMSEVHLARDLRLH-RDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV 94
Query: 148 FGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ GP +V EY+ +L + + + ++ + L + H+
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ 151
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVN-TFRISGTHGYMAPEYA 262
IIHRD+K +NI++ K+ DFG+AR V T + GT Y++PE A
Sbjct: 152 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+ ++DV+S G ++ E+++G G
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-AVKKLSVD---SRQGLREFTNEVKLLLKIQHKN 143
F+ L LG G FG V +E+ A+K L D + E ++L +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 144 LVTLFGCCAEGPEKM-LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
+T C + +++ V EY+ L Y I + ++ GL +LH
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI---QQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMAPE 260
+ II+RD+K N++LD + + KI+DFG+ + + G V T GT Y+APE
Sbjct: 138 KRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG----VTTREFCGTPDYIAPE 190
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
+ D ++YGVL+ E+++G+ DG
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNL 144
+ L ++G G FG V++ GQ++A+KK+ +++ + T E+K+L ++H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS----------SLDWTTRYRIVMGV 194
V L C + Y K Y +FD + + R++ +
Sbjct: 80 VNLIEIC-----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP-GEDTHVNTF--RIS 251
GL Y+H +I+HRD+KA+N+L+ K++DFGLAR F +++ N + R+
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 252 GTHGYMAPEYAL 263
T Y PE L
Sbjct: 192 -TLWYRPPELLL 202
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 88 FSDLNQLGHGGFGPVYRGLM-PNGQEIAVKKL--SVDSRQGLREFTNEVKLLLKIQHKNL 144
+ DL +G G +G V + G ++A+KKL S + E++LL ++H+N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFI-------FDKT------KSSSLDWTTRYRIV 191
+ L + P+++LD F F T K L +V
Sbjct: 87 IGLLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLV 134
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS 251
+ +GL Y+H A IIHRD+K N+ ++E KI DFGLAR D+ + +
Sbjct: 135 YQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV- 187
Query: 252 GTHGYMAPEYALHGYLSVKT-DVFSYGVLVLEIVSGR 287
T Y APE L+ +T D++S G ++ E+++G+
Sbjct: 188 -TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNL 144
+ L ++G G FG V++ GQ++A+KK+ +++ + T E+K+L ++H+N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS----------SLDWTTRYRIVMGV 194
V L C + Y K Y +FD + + R++ +
Sbjct: 79 VNLIEIC-----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 133
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF 238
GL Y+H +I+HRD+KA+N+L+ K++DFGLAR F
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 174
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-------AVKKLSVDSRQGLREFTNEVKLLLKIQ 140
F L LG G FG V+ +G + +KK ++ R +R E +L+++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 85
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H +V L + L+ ++L + D F T+ S T + +A L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFL--RGGDLF----TRLSKEVMFTEEDVKFYLAELALA 139
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
L II+RD+K NILLDE+ + K++DFGL++ D + GT YMAPE
Sbjct: 140 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 197
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
+ D +S+GVL+ E+++G G+ KE ++
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-------AVKKLSVDSRQGLREFTNEVKLLLKIQ 140
F L LG G FG V+ +G + +KK ++ R +R E +L+++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H +V L + L+ ++L + D F T+ S T + +A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFL--RGGDLF----TRLSKEVMFTEEDVKFYLAELALA 138
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
L II+RD+K NILLDE+ + K++DFGL++ D + GT YMAPE
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 196
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
+ D +S+GVL+ E+++G G+ KE ++
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVK----KLSVDSRQGL--REFTNEVK 134
Q +F+ +LG G F V + G E A K + S SR+G+ E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGV 194
+L ++ H N++TL + +L+ E + L F+ K S + T+ + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS---FIKQI 124
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRI 250
G+ YLH +I H D+K NI+L ++ P K+ DFGLA N F
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-- 179
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT ++APE + L ++ D++S GV+ ++SG
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-------AVKKLSVDSRQGLREFTNEVKLLLKIQ 140
F L LG G FG V+ +G + +KK ++ R +R E +L+++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H +V L + L+ ++L + D F T+ S T + +A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFL--RGGDLF----TRLSKEVMFTEEDVKFYLAELALA 138
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
L II+RD+K NILLDE+ + K++DFGL++ D + GT YMAPE
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPE 196
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
+ D +S+GVL+ E+++G G+ KE ++
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 16/227 (7%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGLMPNG--------QEIAVKKLSVDSRQGLREFTNEV 133
++ F L LG GG+G V++ G ++ K + V + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
+L +++H +V L G + L+ EYL L + ++ D Y +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAEIS 131
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
+A G +LH++ II+RD+K NI+L+ Q + K++DFGL + + T + F GT
Sbjct: 132 MALG--HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF--CGT 184
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKAD 300
YMAPE + + D +S G L+ ++++G G K+ D
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 24/233 (10%)
Query: 67 SGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQG 125
SG + L + Q N +L ++G G G V++ G IAVK++ R G
Sbjct: 6 SGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR---RSG 62
Query: 126 LREFTNEVKLLLKIQHKN-----LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS 180
+E + + L + K+ +V FG + + E + + K
Sbjct: 63 NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEK---LKKRMQG 119
Query: 181 SLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLA-RLFP 239
+ ++ + + + L YL E+ +IHRD+K SNILLDE+ K+ DFG++ RL
Sbjct: 120 PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLV- 176
Query: 240 GEDTHVNTFRISGTHGYMAPEY-----ALHGYLSVKTDVFSYGVLVLEIVSGR 287
+D + R +G YMAPE ++ DV+S G+ ++E+ +G+
Sbjct: 177 -DDKAKD--RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 38/234 (16%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLREFTNEVKLLLK 138
+L+ A++F ++ LG G FG V + + + A+KK+ + + L +EV LL
Sbjct: 1 SLRYASDF-EEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLAS 58
Query: 139 IQHKNLVTLFGCCAE-------------GPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWT 185
+ H+ +V + E + EY N +L I + + D
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD-- 116
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--------- 236
+R+ + L Y+H + IIHRD+K NI +DE N KI DFGLA+
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 237 -----LFPGEDTHVNTFRISGTHGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIV 284
PG ++ + GT Y+A E G+ + K D++S G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTS--AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 67 SGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIA-----VKKL 118
SG D + NL+F + + +LG G F V R + + GQE A KKL
Sbjct: 9 SGVDLGTENLYFQ--------SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL 60
Query: 119 SVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK 178
S Q L E ++ ++H N+V L +E L+++ + L I +
Sbjct: 61 SARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY 117
Query: 179 SSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLN---PKISDFGLA 235
S D + + + +L+ H+ ++HRD+K N+LL +L K++DFGLA
Sbjct: 118 YSEADAS---HCIQQILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLA 171
Query: 236 RLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GE F +GT GY++PE D+++ GV++ ++ G
Sbjct: 172 IEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVK----KLSVDSRQGL--REFTNEVK 134
Q +F+ +LG G F V + G E A K + S SR+G+ E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGV 194
+L ++ H N++TL + +L+ E + L F+ K S + T+ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS---FIKQI 124
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRI 250
G+ YLH +I H D+K NI+L ++ P K+ DFGLA N F
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-- 179
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT ++APE + L ++ D++S GV+ ++SG
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 94 LGHGGFGPVYRGLMPNGQ----EIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKNLVTL 147
LG G FG V + ++AVK L D + + EF E + + H ++ L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 148 FGCC----AEG--PEKMLVYEYLPNKSLDYFIFDK---TKSSSLDWTTRYRIVMGVARGL 198
G A+G P M++ ++ + L F+ +L T R ++ +A G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
YL IHRD+ A N +L E + ++DFGL+R D + ++A
Sbjct: 151 EYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSY 304
E +V +DV+++GV + EI++ + G E A++ +Y
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMT--RGQTPYAGIENAEIYNY 251
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 92 NQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G +G V + +G+++A+KKLS S + E+ LL +QH+N++ L
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 149 GCCAEGPEKMLVYEY---LPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
Y++ +P D K +V + +GL Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTD---LQKIMGMEFSEEKIQYLVYQMLKGLKYIHS-- 162
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG 265
A ++HRD+K N+ ++E KI DFGLAR D + + + T Y APE L
Sbjct: 163 -AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV--TRWYRAPEVILSW 216
Query: 266 -YLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
+ + D++S G ++ E+++G+ G+
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLV 145
F + LG GGFG V+ + A+K++ + +R+ RE EVK L K++H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 146 TLFGCCAEG-------PEKMLVYEYLP-----NKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
F E P VY Y+ ++L ++ + + + I +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR-----------LFPGED 242
+A + +LH + ++HRD+K SNI K+ DFGL L P
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 243 THVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
+T ++ GT YM+PE S K D+FS G+++ E++
Sbjct: 184 YARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVK----KLSVDSRQGL--REFTNEVK 134
Q +F+ +LG G F V + G E A K + S SR+G+ E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGV 194
+L ++ H N++TL + +L+ E + L F+ K S + T+ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS---FIKQI 124
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRI 250
G+ YLH +I H D+K NI+L ++ P K+ DFGLA N F
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-- 179
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT ++APE + L ++ D++S GV+ ++SG
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 42/227 (18%)
Query: 91 LNQLGHGGFGPVYRGL-MPNGQEIAVKKL------SVDSRQGLREFTNEVKLLLKIQ-HK 142
+ +LG G +G V++ + G+ +AVKK+ S D+++ RE + +L ++ H+
Sbjct: 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFRE----IMILTELSGHE 69
Query: 143 NLVTLFGCCAEGPEK--MLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
N+V L ++ LV++Y+ + +++ L+ + +V + + + Y
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKY 124
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS--------- 251
LH ++HRD+K SNILL+ + + K++DFGL+R F N +S
Sbjct: 125 LHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 252 ----------GTHGYMAPEYALHGYLSVK-TDVFSYGVLVLEIVSGR 287
T Y APE L K D++S G ++ EI+ G+
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 38/234 (16%)
Query: 80 TLQVATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLREFTNEVKLLLK 138
+L+ A++F ++ LG G FG V + + + A+KK+ + + L +EV LL
Sbjct: 1 SLRYASDF-EEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLAS 58
Query: 139 IQHKNLVTLFGCCAE-----GPEK--------MLVYEYLPNKSLDYFIFDKTKSSSLDWT 185
+ H+ +V + E P + EY N++L I + + D
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD-- 116
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--------- 236
+R+ + L Y+H + IIHR++K NI +DE N KI DFGLA+
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 237 -----LFPGEDTHVNTFRISGTHGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIV 284
PG ++ + GT Y+A E G+ + K D +S G++ E +
Sbjct: 174 KLDSQNLPGSSDNLTS--AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 82 QVATNFFSDL---NQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQ--GLREFTNEVKL 135
++ N SD + LG G +G V P G+ +A+KK+ + LR E+K+
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKI 62
Query: 136 LLKIQHKNLVTLFGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
L +H+N++T+F E ++ + + L L I T+ S D + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYF--I 118
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF--PGEDTHVNTFR 249
R + LH + +IHRD+K SN+L++ + K+ DFGLAR+ D T +
Sbjct: 119 YQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 250 ISG------THGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
SG T Y APE L S DV+S G ++ E+ R GR
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 92 NQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNLVTLF 148
+G G +G V + +G+++A+KKLS S + E+ LL +QH+N++ L
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 149 GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTR--YRIVMGVARGLLYLHEEAP 206
Y++ + + D K L ++ +V + +GL Y+H
Sbjct: 90 DVFTPASSLRNFYDFY--LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS--- 144
Query: 207 ARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHG- 265
A ++HRD+K N+ ++E KI DFGLAR D + + + T Y APE L
Sbjct: 145 AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV--TRWYRAPEVILSWM 199
Query: 266 YLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
+ + D++S G ++ E+++G+ G+
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKTLFKGK 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVK----KLSVDSRQGL--REFTNEVK 134
Q +F+ +LG G F V + G E A K + S SR+G+ E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGV 194
+L ++ H N++TL + +L+ E + L F+ K S + T+ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS---FIKQI 124
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRI 250
G+ YLH +I H D+K NI+L ++ P K+ DFGLA N F
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-- 179
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT ++APE + L ++ D++S GV+ ++SG
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 82 QVATNFFSDL---NQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQ--GLREFTNEVKL 135
++ N SD + LG G +G V P G+ +A+KK+ + LR E+K+
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKI 62
Query: 136 LLKIQHKNLVTLFGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
L +H+N++T+F E ++ + + L L I T+ S D + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYF--I 118
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF--PGEDTHVNTFR 249
R + LH + +IHRD+K SN+L++ + K+ DFGLAR+ D T +
Sbjct: 119 YQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 250 ISG------THGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
SG T Y APE L S DV+S G ++ E+ R GR
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 82 QVATNFFSDL---NQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQ--GLREFTNEVKL 135
++ N SD + LG G +G V P G+ +A+KK+ + LR E+K+
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKI 62
Query: 136 LLKIQHKNLVTLFGC----CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIV 191
L +H+N++T+F E ++ + + L L I T+ S D + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDDHIQYF--I 118
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF--PGEDTHVNTFR 249
R + LH + +IHRD+K SN+L++ + K+ DFGLAR+ D T +
Sbjct: 119 YQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 250 ISG------THGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
SG T Y APE L S DV+S G ++ E+ R GR
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVK----KLSVDSRQGL--REFTNEVK 134
Q +F+ +LG G F V + G E A K + S SR+G+ E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGV 194
+L ++ H N++TL + +L+ E + L F+ K S + T+ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS---FIKQI 124
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRI 250
G+ YLH +I H D+K NI+L ++ P K+ DFGLA N F
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-- 179
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT ++APE + L ++ D++S GV+ ++SG
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVK----KLSVDSRQGL--REFTNEVK 134
Q +F+ +LG G F V + G E A K + S SR+G+ E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 135 LLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGV 194
+L ++ H N++TL + +L+ E + L F+ K S + T+ + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS---FIKQI 124
Query: 195 ARGLLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGLARLFPGEDTHVNTFRI 250
G+ YLH +I H D+K NI+L ++ P K+ DFGLA N F
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-- 179
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT ++APE + L ++ D++S GV+ ++SG
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFGC-- 150
+G G FG V+RG G+E+AVK S + R RE E+ + ++H+N++
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 68
Query: 151 --CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE---- 204
+ LV +Y + SL FD ++ ++ + A GL +LH E
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 205 --APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-----GTHGYM 257
PA I HRD+K+ NIL+ + I+D GLA D+ +T I+ GT YM
Sbjct: 125 QGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYM 180
Query: 258 APEYALHGYLSVK-------TDVFSYGVLVLEI 283
APE L +++K D+++ G++ EI
Sbjct: 181 APE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLVT 146
+++ +G+G FG V++ + E+A+KK+ D R F N E++++ ++H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVD 96
Query: 147 LFGCCAEGPEKM------LVYEYLPNK----SLDYFIFDKTKSSSLDWTTRYRIVMGVAR 196
L +K LV EY+P S Y +T L Y+++ R
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL----R 152
Query: 197 GLLYLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLARLFPGEDTHVNTFRISGTHG 255
L Y+H I HRDIK N+LLD K+ DFG A++ + +V+ +
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI---CSRY 206
Query: 256 YMAPE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLG 295
Y APE + Y + D++S G ++ E++ G+ G G
Sbjct: 207 YRAPELIFGATNY-TTNIDIWSTGCVMAELMQGQPLFPGESG 247
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 26/249 (10%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPN-GQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+ DL LG GG G V+ + + + +A+KK+ + Q ++ E+K++ ++ H N+V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 147 LF--------------GCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVM 192
+F G E +V EY+ + + L+ R +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARL-FMY 127
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRIS 251
+ RGL Y+H A ++HRD+K +N+ ++ E L KI DFGLAR+ +H
Sbjct: 128 QLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 252 -GTHGYMAPEYALHGYLSVKT-DVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLF 309
T Y +P L K D+++ G + E+++G+ G E+ L+ + +
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244
Query: 310 QGEKALELV 318
E EL+
Sbjct: 245 HEEDRQELL 253
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFGC-- 150
+G G FG V+RG G+E+AVK S + R RE E+ + ++H+N++
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 73
Query: 151 --CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE---- 204
+ LV +Y + SL FD ++ ++ + A GL +LH E
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 205 --APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-----GTHGYM 257
PA I HRD+K+ NIL+ + I+D GLA D+ +T I+ GT YM
Sbjct: 130 QGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYM 185
Query: 258 APEYALHGYLSVK-------TDVFSYGVLVLEI 283
APE L +++K D+++ G++ EI
Sbjct: 186 APE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLRE-FTNEVKLLLKIQHKNLVTLFG 149
LG GGF + + +E+ K+ S + RE + E+ + + H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + G YLH R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYL-RQIVLGCQYLHRN---RV 160
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARL--FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRD+K N+ L+E L KI DFGLA + GE V + GT Y+APE
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKGH 216
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
S + DV+S G ++ ++ G+ + KE
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPFETSCLKE 246
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLRE-FTNEVKLLLKIQHKNLVTLFG 149
LG GGF + + +E+ K+ S + RE + E+ + + H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + G YLH R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYL-RQIVLGCQYLHRN---RV 136
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARL--FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRD+K N+ L+E L KI DFGLA + GE V + GT Y+APE
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKGH 192
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
S + DV+S G ++ ++ G+ + KE
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKE 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLRE-FTNEVKLLLKIQHKNLVTLFG 149
LG GGF + + +E+ K+ S + RE + E+ + + H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + G YLH R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYL-RQIVLGCQYLHRN---RV 162
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARL--FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRD+K N+ L+E L KI DFGLA + GE V + GT Y+APE
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKGH 218
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
S + DV+S G ++ ++ G+ + KE
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKE 248
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFGC-- 150
+G G FG V+RG G+E+AVK S + R RE E+ + ++H+N++
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 93
Query: 151 --CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE---- 204
+ LV +Y + SL FD ++ ++ + A GL +LH E
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 149
Query: 205 --APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-----GTHGYM 257
PA I HRD+K+ NIL+ + I+D GLA D+ +T I+ GT YM
Sbjct: 150 QGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYM 205
Query: 258 APEYALHGYLSVK-------TDVFSYGVLVLEI 283
APE L +++K D+++ G++ EI
Sbjct: 206 APE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGT 253
VA+G+ +L A + IHRD+ A NILL E+ KI DFGLAR + +V
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 254 HGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+MAPE ++++DV+S+GVL+ EI S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFGC-- 150
+G G FG V+RG G+E+AVK S + R RE E+ + ++H+N++
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 70
Query: 151 --CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE---- 204
+ LV +Y + SL FD ++ ++ + A GL +LH E
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 205 --APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-----GTHGYM 257
PA I HRD+K+ NIL+ + I+D GLA D+ +T I+ GT YM
Sbjct: 127 QGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYM 182
Query: 258 APEYALHGYLSVK-------TDVFSYGVLVLEI 283
APE L +++K D+++ G++ EI
Sbjct: 183 APE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 93 QLGHGGFGPVYRGLMPNGQ---EIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
+LG G FG V+R M + Q + AVKK+ ++ + E+ + +V L+G
Sbjct: 81 RLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFR-----AEELMACAGLTSPRIVPLYG 133
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVA-RGLLYLHEEAPAR 208
EGP + E L SL + K R +G A GL YLH R
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYYLGQALEGLEYLHSR---R 186
Query: 209 IIHRDIKASNILLD-EQLNPKISDFGLARLFP----GEDTHVNTFRISGTHGYMAPEYAL 263
I+H D+KA N+LL + + + DFG A G+D + I GT +MAPE L
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY-IPGTETHMAPEVVL 245
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
K DV+S ++L +++G
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFGC-- 150
+G G FG V+RG G+E+AVK S + R RE E+ + ++H+N++
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 67
Query: 151 --CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE---- 204
+ LV +Y + SL FD ++ ++ + A GL +LH E
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 205 --APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-----GTHGYM 257
PA I HRD+K+ NIL+ + I+D GLA D+ +T I+ GT YM
Sbjct: 124 QGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYM 179
Query: 258 APEYALHGYLSVK-------TDVFSYGVLVLEI 283
APE L +++K D+++ G++ EI
Sbjct: 180 APE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFGC-- 150
+G G FG V+RG G+E+AVK S + R RE E+ + ++H+N++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 106
Query: 151 --CAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE---- 204
+ LV +Y + SL FD ++ ++ + A GL +LH E
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162
Query: 205 --APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRIS-----GTHGYM 257
PA I HRD+K+ NIL+ + I+D GLA D+ +T I+ GT YM
Sbjct: 163 QGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYM 218
Query: 258 APEYALHGYLSVK-------TDVFSYGVLVLEI 283
APE L +++K D+++ G++ EI
Sbjct: 219 APE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L+E NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+++D+Q K++DFGLA+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSV-DSRQGLREFTNEVKLLLKIQHKNLVTLFGCCA 152
+G G +G V+RGL +G+ +AVK S D + RE E+ + ++H N++
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 153 ----EGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE---- 204
+ L+ Y + SL +D + +L+ R+ + A GL +LH E
Sbjct: 73 TSRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 205 --APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV---NTFRISGTHGYMAP 259
PA I HRD K+ N+L+ L I+D GLA + ++ N R+ GT YMAP
Sbjct: 129 QGKPA-IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAP 186
Query: 260 EY-----ALHGYLSVK-TDVFSYGVLVLEI 283
E + S K TD++++G+++ EI
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 37/291 (12%)
Query: 73 NLFFD--LRTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKL--SVDSRQGLR 127
NL+F +V + + +LG G +G V + +P+GQ AVK++ +V+S++ R
Sbjct: 19 NLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKR 78
Query: 128 EFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYF---IFDKTKSSSLDW 184
+ + VT +G + + E L + SLD F + DK ++ D
Sbjct: 79 LLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDI 137
Query: 185 TTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTH 244
+ I + + + L +LH + +IHRD+K SN+L++ K DFG++ +
Sbjct: 138 LGK--IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD--- 190
Query: 245 VNTFRISGTHGYMA-----PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKA 299
V +G Y A PE GY SVK+D++S G+ +E+ R +D
Sbjct: 191 VAKDIDAGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYD-------- 241
Query: 300 DLLSYTW-TLFQGEKALELVDPSLAKCNRDEAAMCIQLGLLCCQQSVAERP 349
+W T FQ K + + +PS +A + C +++ ERP
Sbjct: 242 -----SWGTPFQQLKQV-VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 286
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFT--NEVKLLLKIQHKNL 144
+ + +LG G +G VY+ + + +A+K++ ++ + T EV LL ++QH+N+
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L L++EY N Y + S + + Y+++ GV + H
Sbjct: 96 IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN----FCHSR 151
Query: 205 APARIIHRDIKASNILL---DEQLNP--KISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
R +HRD+K N+LL D P KI DFGLAR F G T I T Y P
Sbjct: 152 ---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII-TLWYRPP 206
Query: 260 EYALHG-YLSVKTDVFSYGVLVLEIV 284
E L + S D++S + E++
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 85 TNFFSDLNQLGHGGFGPVY--RGLMPNGQEIA--VKKLSVDSRQGLREFTNEVKLLLKIQ 140
+ + + +LG G +G V R + + + ++K SV + + EV +L +
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLD 94
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H N++ L+ + LV E L I + K + +D I+ V G+ Y
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTY 151
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTHVNTFRISGTHGYM 257
LH+ I+HRD+K N+LL+ + KI DFGL+ +F + GT Y+
Sbjct: 152 LHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL---GTAYYI 205
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
APE Y K DV+S GV++ +++G G+ +E
Sbjct: 206 APEVLRKKY-DEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLRE-FTNEVKLLLKIQHKNLVTLFG 149
LG GGF + + +E+ K+ S + RE + E+ + + H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + G YLH R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYL-RQIVLGCQYLHRN---RV 142
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+K N+ L+E L KI DFGLA + T + GT Y+APE S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 270 KTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ DV+S G ++ ++ G+ + KE
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETSCLKE 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 43/255 (16%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAE 153
+G G FG VY G I + + D+ L+ F EV + +H+N+V G C
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 154 GPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRD 213
P ++ ++L + D LD +I + +G+ YLH + I+H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 214 IKASNILLDEQLNPK--ISDFGLARL--FPGEDTHVNTFRI-SGTHGYMAPEYALHGY-- 266
+K+ N+ D N K I+DFGL + + RI +G ++APE
Sbjct: 156 LKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 267 -------LSVKTDVFSYGV-------------------LVLEIVSGRKNHDGR--LGKEK 298
S +DVF+ G ++ ++ +G K + + +GKE
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEI 272
Query: 299 ADLLSYTWTLFQGEK 313
+D+L + W Q E+
Sbjct: 273 SDILLFCWAFEQEER 287
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAE 153
LG G FG V+R + + ++ + K E+ +L +H+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 154 GPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRI--VMGVARGLLYLHEEAPARIIH 211
E ++++E++ LD IF++ +S+ + R + V V L +LH I H
Sbjct: 73 MEELVMIFEFISG--LD--IFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGH 125
Query: 212 RDIKASNILLDEQLNP--KISDFGLAR-LFPGEDTHVNTFRISGTH-GYMAPEYALHGYL 267
DI+ NI+ + + KI +FG AR L PG++ FR+ T Y APE H +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-----FRLLFTAPEYYAPEVHQHDVV 180
Query: 268 SVKTDVFSYGVLVLEIVSG 286
S TD++S G LV ++SG
Sbjct: 181 STATDMWSLGTLVYVLLSG 199
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLRE-FTNEVKLLLKIQHKNLVTLFG 149
LG GGF + + +E+ K+ S + RE + E+ + + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + G YLH R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYL-RQIVLGCQYLHRN---RV 138
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+K N+ L+E L KI DFGLA + T + GT Y+APE S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 270 KTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ DV+S G ++ ++ G+ + KE
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLRE-FTNEVKLLLKIQHKNLVTLFG 149
LG GGF + + +E+ K+ S + RE + E+ + + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + G YLH R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYL-RQIVLGCQYLHRN---RV 138
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSV 269
IHRD+K N+ L+E L KI DFGLA + T + GT Y+APE S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 270 KTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ DV+S G ++ ++ G+ + KE
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + +G G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+P D F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q K++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + +G G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+P D F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q K++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-AVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
+ L ++G G +G V++ EI A+K++ +D +G+ E+ LL +++HKN+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+ YF + + LD + + +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
++HRD+K N+L++ K++DFGLAR F G + + T Y P+
Sbjct: 121 ---NVLHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 265 GYL-SVKTDVFSYGVLVLEIVSGRK 288
L S D++S G + E+ + +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGL-MPNGQEIA-----VKKLSVDSRQGLREFTNEVKLLLK 138
T + +LG G F V R + + GQE A KKLS Q L E ++
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
++H N+V L +E L+++ + L I + S D + + + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV 123
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLN---PKISDFGLARLFPGEDTHVNTFRISGTHG 255
L+ H+ ++HR++K N+LL +L K++DFGLA GE F +GT G
Sbjct: 124 LHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPG 178
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
Y++PE D+++ GV++ ++ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 66 GSGAD--SWNLFFDLRTLQVATNFFSD---LNQLGHGGFGPVYRGLMPNGQE------IA 114
SG D + NL+F + + T F D +LG G F V R + + I
Sbjct: 8 SSGVDLGTENLYF--QXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIIN 65
Query: 115 VKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIF 174
KKLS Q L E ++ ++H N+V L +E LV++ + L I
Sbjct: 66 TKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV 122
Query: 175 DKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLN---PKISD 231
+ S D + + + + ++H+ I+HRD+K N+LL + K++D
Sbjct: 123 AREYYSEADAS---HCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLAD 176
Query: 232 FGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
FGLA GE F +GT GY++PE D+++ GV++ ++ G
Sbjct: 177 FGLAIEVQGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L+E NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+++D+Q +++DFGLA+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 110
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 223
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 224 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 265
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 77 DLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNE 132
D+ T + F LG G FG VY I K+ S ++G+ + E
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 133 VKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVM 192
+++ + H N++ L+ + L+ EY P L + KS + D I+
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL---YKELQKSCTFDEQRTATIME 130
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR--- 249
+A L+Y H + ++IHRDIK N+LL + KI+DFG + H + R
Sbjct: 131 ELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRKT 180
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
+ GT Y+ PE + K D++ GVL E++ G
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 146 TL-FGCCAEGPEKMLVY-----EYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L + + G +K +VY +Y+P +L + + R L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 189
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 190 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 114
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 175 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 227
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 228 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 269
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 110
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 223
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 224 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 265
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 104
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 165 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 217
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 218 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 259
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 95
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 156 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 208
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 209 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 250
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 88
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 201
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 202 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 112
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 173 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 225
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 226 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 267
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 81
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 142 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 194
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 195 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 236
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+P + F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 84
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 145 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 197
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 198 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+P + F + + R+ + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 160
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 212
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+P + F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 88
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 201
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 202 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 243
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 155
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 216 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 268
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 269 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 310
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 189
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 190 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 80
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 141 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 193
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 194 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 235
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 27/185 (14%)
Query: 112 EIAVKKLSVDSRQGLREFTNEVKLLLKI-QHKNLVTLFGCCAEGPEKMLVYEYLP----- 165
E AVK + + R+ T E+++LL+ QH N++TL +G +V E +
Sbjct: 49 EFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL 104
Query: 166 NKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNIL-LDEQ 224
+K L F + ++S++ +T + + + YLH + ++HRD+K SNIL +DE
Sbjct: 105 DKILRQKFFSEREASAVLFT--------ITKTVEYLHAQG---VVHRDLKPSNILYVDES 153
Query: 225 LNP---KISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVL 281
NP +I DFG A+ E+ + T T ++APE D++S GVL+
Sbjct: 154 GNPESIRICDFGFAKQLRAENGLLMT--PCYTANFVAPEVLERQGYDAACDIWSLGVLLY 211
Query: 282 EIVSG 286
+++G
Sbjct: 212 TMLTG 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGL-MPNGQEIA-----VKKLSVDSRQGLREFTNEVKLLLK 138
T+ + +LG G F V R + +P GQE A KKLS Q L E ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
++H N+V L +E LV++ + L I + S D + + + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESV 116
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLN---PKISDFGLARLFPGEDTHVNTFRISGTHG 255
+ H I+HRD+K N+LL + K++DFGLA G+ F +GT G
Sbjct: 117 NHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPG 171
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
Y++PE D+++ GV++ ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 77
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 190
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 191 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 232
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 93 QLGHGGFGPVYRGLMPNGQ---EIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
+LG G FG V+R M + Q + AVKK+ ++ + E+ + +V L+G
Sbjct: 100 RLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFR-----AEELMACAGLTSPRIVPLYG 152
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVA-RGLLYLHEEAPAR 208
EGP + E L SL + K R +G A GL YLH R
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYYLGQALEGLEYLHSR---R 205
Query: 209 IIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHGYMAPEYALH 264
I+H D+KA N+LL + + + DFG A + + I GT +MAPE L
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 265 GYLSVKTDVFSYGVLVLEIVSG 286
K DV+S ++L +++G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 189
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 190 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 89
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 150 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 202
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 203 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + +G G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q K++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGL-MPNGQEIA-----VKKLSVDSRQGLREFTNEVKLLLK 138
T+ + +LG G F V R + +P GQE A KKLS Q L E ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
++H N+V L +E LV++ + L I + S D + + + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESV 116
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQ---LNPKISDFGLARLFPGEDTHVNTFRISGTHG 255
+ H I+HRD+K N+LL + K++DFGLA G+ F +GT G
Sbjct: 117 NHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPG 171
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
Y++PE D+++ GV++ ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ D R F N E++++ K+ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIV 76
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 189
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 190 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 94 LGHGGFGPVYRGLMPN----GQ----EIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
LG G F +++G+ GQ E+ +K L R F ++ K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+G C G E +LV E++ SLD ++ ++ W + + +A + +L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEENT 133
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLF-PGEDTHVNTFRISGTHGYMAPEYALH 264
+IH ++ A NILL + + K + +L PG V I P +
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 265 G--YLSVKTDVFSYGVLVLEIVSG 286
L++ TD +S+G + EI SG
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY P + F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+++D+Q K++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H LV L C V EY+ L +F + L ++ L Y
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMA 258
LHE II+RD+K N+LLD + + K++D+G+ + L PG+ T +TF GT Y+A
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--STF--CGTPNYIA 221
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
PE D ++ GVL+ E+++GR D
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 115/273 (42%), Gaps = 31/273 (11%)
Query: 73 NLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVK---KLSVDSRQGLRE 128
NL+F Q ++ + + +LG G +G V G E A+K K SV +
Sbjct: 13 NLYF-----QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA 67
Query: 129 FTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRY 188
+EV +L ++ H N++ L+ + LV E L I + K S +D
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-- 125
Query: 189 RIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTHV 245
I+ V G YLH+ I+HRD+K N+LL+ + KI DFGL+ F
Sbjct: 126 -IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 181
Query: 246 NTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYT 305
GT Y+APE Y K DV+S GV++ ++ G G+ +E
Sbjct: 182 ERL---GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQE-------- 229
Query: 306 WTLFQGEKALELVDPSLAKCNRDEAAMCIQLGL 338
L + EK DP DEA ++L L
Sbjct: 230 -ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 261
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 112 EIAVKKLSVDSRQGLREFTNEVKLLLKI-QHKNLVTLFGCCAEGPEKMLVYEY-----LP 165
E AVK + + R+ T E+++LL+ QH N++TL +G +V E L
Sbjct: 49 EFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELL 104
Query: 166 NKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNIL-LDEQ 224
+K L F + ++S++ +T + + + YLH + ++HRD+K SNIL +DE
Sbjct: 105 DKILRQKFFSEREASAVLFT--------ITKTVEYLHAQG---VVHRDLKPSNILYVDES 153
Query: 225 LNP---KISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVL 281
NP +I DFG A+ E+ + T T ++APE D++S GVL+
Sbjct: 154 GNPESIRICDFGFAKQLRAENGLLXT--PCYTANFVAPEVLERQGYDAACDIWSLGVLLY 211
Query: 282 EIVSG 286
++G
Sbjct: 212 TXLTG 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHKNL 144
+ L +G G G V G +AVKKLS ++ + E+ LL + HKN+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFDKTKSS-------SLDWTTRYRIVM 192
++L + P K+L+ Y + + ++ LD ++
Sbjct: 86 ISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY 133
Query: 193 GVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISG 252
+ G+ +LH A IIHRD+K SNI++ KI DFGLAR T F ++
Sbjct: 134 QMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TACTNFMMTP 184
Query: 253 ---THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L + D++S G ++ E+V G
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 29/230 (12%)
Query: 67 SGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFG-PVYRGLMPNGQEIAVKKLSVD-- 121
SG D + NL+F + + L ++G G FG + +G++ +K++++
Sbjct: 9 SGVDLGTENLYFQ------SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM 62
Query: 122 SRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKT---- 177
S + E EV +L ++H N+V E +V +Y L I +
Sbjct: 63 SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF 122
Query: 178 -KSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR 236
+ LDW + + L ++H+ +I+HRDIK+ NI L + ++ DFG+AR
Sbjct: 123 QEDQILDWFVQ------ICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR 173
Query: 237 LFPGEDTHVNTFRIS-GTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVS 285
+ ++ V R GT Y++PE + + K+D+++ G ++ E+ +
Sbjct: 174 VL---NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVYR-GLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 145 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEII 196
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 197 LSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMPNGQ---EIAVKKLSVDSRQGLREFTNEVKLLLKIQH 141
++ + +LG G FG V+R M + Q + AVKK+ ++ + E+ +
Sbjct: 71 VHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSS 123
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVA-RGLLY 200
+V L+G EGP + E L SL I K R +G A GL Y
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEY 179
Query: 201 LHEEAPARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHGY 256
LH RI+H D+KA N+LL + + DFG A + + I GT +
Sbjct: 180 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 236
Query: 257 MAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
MAPE + K D++S ++L +++G
Sbjct: 237 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+++D+Q K++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
F + LG G F V+ G+ A+K + NE+ +L KI+H+N+VT
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
L LV + + L I ++ + D + ++ V + YLHE
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHENG- 126
Query: 207 ARIIHRDIKASNIL-LDEQLNPK--ISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
I+HRD+K N+L L + N K I+DFGL+++ E + + GT GY+APE
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMS-TACGTPGYVAPEVLA 180
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
S D +S GV+ ++ G
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCG 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 15/241 (6%)
Query: 55 RAAGE----SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY-RGLMPN 109
+AA E S +D SGA+ + +V N F L LG G FG V
Sbjct: 113 QAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKAT 172
Query: 110 GQEIAVKKLS---VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPN 166
G+ A+K L + ++ + E ++L +H L L V EY
Sbjct: 173 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232
Query: 167 KSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLN 226
L +F + + S D Y + L YLH E +++RD+K N++LD+ +
Sbjct: 233 GEL-FFHLSRERVFSEDRARFYG--AEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGH 287
Query: 227 PKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
KI+DFGL + + + TF GT Y+APE D + GV++ E++ G
Sbjct: 288 IKITDFGLCKEGIKDGATMKTF--CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
Query: 287 R 287
R
Sbjct: 346 R 346
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSR----QGLREFTNEVKLLLKIQHKNLVTLFG 149
LG GGF Y + +E+ K+ S + + E+ + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + +G+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARL--FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRD+K N+ L++ ++ KI DFGLA F GE + GT Y+APE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT----LCGTPNYIAPEVLCKKGH 219
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
S + D++S G ++ ++ G+ + KE
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 94 LGHGGFGPVYRGLMPN----GQ----EIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLV 145
LG G F +++G+ GQ E+ +K L R F ++ K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEA 205
+G C G E +LV E++ SLD ++ ++ W + + +A + +L E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEENT 133
Query: 206 PARIIHRDIKASNILLDEQLNPKISDFGLARLF-PGEDTHVNTFRISGTHGYMAPEYALH 264
+IH ++ A NILL + + K + +L PG V I P +
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 265 G--YLSVKTDVFSYGVLVLEIVSG 286
L++ TD +S+G + EI SG
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-AVKKLSVDSR-QGLREFT-NEVKLLLKIQHKNL 144
+ L ++G G +G V++ EI A+K++ +D +G+ E+ LL +++HKN+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L + LV+E+ YF + + LD + + +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALH 264
++HRD+K N+L++ K+++FGLAR F G + + T Y P+
Sbjct: 121 ---NVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 265 GYL-SVKTDVFSYGVLVLEIVSG 286
L S D++S G + E+ +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANA 198
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 29/152 (19%)
Query: 120 VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD---- 175
+ R + + E+ +L K+ H N+V L + PN+ Y +F+
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDD-----------PNEDHLYMVFELVNQ 122
Query: 176 -------KTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPK 228
K S D Y + +G+ YLH + +IIHRDIK SN+L+ E + K
Sbjct: 123 GPVMEVPTLKPLSEDQARFY--FQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIK 177
Query: 229 ISDFGLARLFPGEDTHVNTFRISGTHGYMAPE 260
I+DFG++ F G D ++ GT +MAPE
Sbjct: 178 IADFGVSNEFKGSDALLSN--TVGTPAFMAPE 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H LV L C V EY+ L +F + L ++ L Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMA 258
LHE II+RD+K N+LLD + + K++D+G+ + L PG+ T GT Y+A
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX----FCGTPNYIA 189
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
PE D ++ GVL+ E+++GR D
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 11/232 (4%)
Query: 60 SAEDADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKL 118
S +D SGA+ + +V N F L LG G FG V G+ A+K L
Sbjct: 125 SGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL 184
Query: 119 S---VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD 175
+ ++ + E ++L +H L L V EY L +F
Sbjct: 185 KKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLS 243
Query: 176 KTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLA 235
+ + S D Y + L YLH E +++RD+K N++LD+ + KI+DFGL
Sbjct: 244 RERVFSEDRARFYG--AEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLC 299
Query: 236 RLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
+ + + TF GT Y+APE D + GV++ E++ GR
Sbjct: 300 KEGIKDGATMKTF--CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSR----QGLREFTNEVKLLLKIQHKNLVTLFG 149
LG GGF Y + +E+ K+ S + + E+ + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + +G+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARL--FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRD+K N+ L++ ++ KI DFGLA F GE + GT Y+APE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX----LCGTPNYIAPEVLCKKGH 219
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
S + D++S G ++ ++ G+ + KE
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H LV L C V EY+ L +F + L ++ L Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMA 258
LHE II+RD+K N+LLD + + K++D+G+ + L PG+ T GT Y+A
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX----FCGTPNYIA 178
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
PE D ++ GVL+ E+++GR D
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H LV L C V EY+ L +F + L ++ L Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMA 258
LHE II+RD+K N+LLD + + K++D+G+ + L PG+ T GT Y+A
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX----FCGTPNYIA 174
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
PE D ++ GVL+ E+++GR D
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 84 ATNFFSD----LNQLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGLREFTNEV 133
A+ FSD +LG G F V R GL + I KKLS Q L E
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EA 79
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG 193
++ K+QH N+V L E LV++ + L I + S D + +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQ 136
Query: 194 VARGLLYLHEEAPARIIHRDIKASNILLDEQLN---PKISDFGLA-RLFPGEDTHVNTFR 249
+ + Y H I+HR++K N+LL + K++DFGLA + E H
Sbjct: 137 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----G 189
Query: 250 ISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
+GT GY++PE S D+++ GV++ ++ G
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKK-LSVDSRQGLREFTNEVKLLLKIQHKNL 144
+F+ + +LG FG VY+ +A K + S + L ++ E+ +L H N+
Sbjct: 12 DFWEIIGELG--DFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLHE 203
V L ++ E+ ++D + + + + ++ ++V L YLH+
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHD 126
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHGYMAPE 260
+IIHRD+KA NIL + K++DFG++ ++T R GT +MAPE
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 261 YAL-----HGYLSVKTDVFSYGVLVLEIVSGRKNH 290
+ K DV+S G+ ++E+ H
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 214
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSR----QGLREFTNEVKLLLKIQHKNLVTLFG 149
LG GGF Y + +E+ K+ S + + E+ + + + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + +G+ YLH R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 147
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARL--FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRD+K N+ L++ ++ KI DFGLA F GE + GT Y+APE
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK----DLCGTPNYIAPEVLCKKGH 203
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
S + D++S G ++ ++ G+ + KE
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKE 233
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQ-HKNLVTLFGCC 151
L GGF VY + +G+E A+K+L + + R EV + K+ H N+V
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 152 AEGPEK-------MLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ G E+ L+ L L F+ L T +I R + ++H +
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLA 235
P IIHRD+K N+LL Q K+ DFG A
Sbjct: 156 KPP-IIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMPNGQ---EIAVKKLSVDSRQGLREFTNEVKLLLKIQH 141
++ + ++G G FG V+R M + Q + AVKK+ ++ + E+ +
Sbjct: 57 VHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSS 109
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVA-RGLLY 200
+V L+G EGP + E L SL I K R +G A GL Y
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEY 165
Query: 201 LHEEAPARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHGY 256
LH RI+H D+KA N+LL + + DFG A + + I GT +
Sbjct: 166 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222
Query: 257 MAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
MAPE + K D++S ++L +++G
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 30/211 (14%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLLKIQHKN 143
F + LG G FG VY + I K+ S ++G+ + E+++ ++H N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSL-----DYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
++ ++ + L+ E+ P L + FD+ +S++ + +A L
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELADAL 127
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHG 255
Y HE ++IHRDIK N+L+ + KI+DFG + H + R + GT
Sbjct: 128 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLD 177
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
Y+ PE K D++ GVL E + G
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKL--SVDSRQGLREFTNEVKLLLKIQHKNL 144
+ + ++G G +G V++ GQ +A+KK S D + E+++L +++H NL
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
V L LV+EY + L D+ + + + I + + + H+
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVK-SITWQTLQAVNFCHKH 121
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL- 263
IHRD+K NIL+ + K+ DFG ARL G + + T Y +PE +
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVG 176
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
DV++ G + E++SG
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSR----QGLREFTNEVKLLLKIQHKNLVTLFG 149
LG GGF Y + +E+ K+ S + + E+ + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 150 CCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARI 209
+ +V E +SL K + + + RY + + +G+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 210 IHRDIKASNILLDEQLNPKISDFGLARL--FPGEDTHVNTFRISGTHGYMAPEYALHGYL 267
IHRD+K N+ L++ ++ KI DFGLA F GE + GT Y+APE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK----DLCGTPNYIAPEVLCKKGH 219
Query: 268 SVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
S + D++S G ++ ++ G+ + KE
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYF--------IFDKTKSS----SLDWTTRYRI 190
N++ L + P KSL+ F + D S LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S GV++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
L L + +V EY P + F + + R+ + YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 160
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+++D+Q K++DFG A+ G T+ + GT Y+APE L
Sbjct: 161 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 212
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYF--------IFDKTKSS----SLDWTTRYRI 190
N++ L + P KSL+ F + D S LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S GV++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGL-MPNGQEIA-----VKKLSVDSRQGLREFTNEVKLLLK 138
T+ + +G G F V R + + G E A KKLS Q L E ++
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
++H N+V L +E LV++ + L I + S D + + + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV 116
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLN---PKISDFGLARLFPGEDTHVNTFRISGTHG 255
L+ H+ ++HRD+K N+LL + K++DFGLA G+ F +GT G
Sbjct: 117 LHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPG 171
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
Y++PE D+++ GV++ ++ G
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMPNGQ---EIAVKKLSVDSRQGLREFTNEVKLLLKIQH 141
++ + ++G G FG V+R M + Q + AVKK+ ++ + E+ +
Sbjct: 73 VHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSS 125
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVA-RGLLY 200
+V L+G EGP + E L SL I K R +G A GL Y
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEY 181
Query: 201 LHEEAPARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHGY 256
LH RI+H D+KA N+LL + + DFG A + + I GT +
Sbjct: 182 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 238
Query: 257 MAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
MAPE + K D++S ++L +++G
Sbjct: 239 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY P + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+++D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-AVKKLSVDS--RQGLREFTNEVKLLLKIQHKN- 143
F+ L LG G FG V E+ AVK L D + E T K +L + K
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 144 -LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
L L C V EY+ L Y I + +A GL +L
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMAPE 260
+ II+RD+K N++LD + + KI+DFG+ + ++ G V T GT Y+APE
Sbjct: 460 SKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYIAPE 512
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+ D +++GVL+ E+++G+ +G
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 21/219 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQ-HKNLVTLFGCC 151
LG G + V + + NG+E AVK + + EV+ L + Q +KN++ L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 152 AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIH 211
+ LV+E L S+ I K + R+V VA L +LH + I H
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 212 RDIKASNILLD--EQLNP-KISDFGLAR--LFPGEDTHVNTFRIS---GTHGYMAPEYA- 262
RD+K NIL + E+++P KI DF L T + T ++ G+ YMAPE
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 263 ----LHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ + D++S GV++ ++SG G G +
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD 233
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 50/245 (20%)
Query: 66 GSGADSWNLFFDLRTLQVATNFFS------DLNQLGHGGFGPVYRGL-MPNGQEIAVKKL 118
GS DS ++QVA + F+ L +G G G V G +AVKKL
Sbjct: 1 GSHMDS-----QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL 55
Query: 119 S--VDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLD-----Y 171
S ++ + E+ LL + HKN+++L + P K+L+ Y
Sbjct: 56 SRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVY 103
Query: 172 FIFDKTKSS-------SLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQ 224
+ + ++ LD ++ + G+ +LH A IIHRD+K SNI++
Sbjct: 104 LVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 160
Query: 225 LNPKISDFGLARLFPGEDTHVNTFRISG---THGYMAPEYALHGYLSVKTDVFSYGVLVL 281
KI DFGLAR T F ++ T Y APE L D++S G ++
Sbjct: 161 CTLKILDFGLAR------TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 214
Query: 282 EIVSG 286
E+V G
Sbjct: 215 ELVKG 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
L L + +V EY P + F + R + YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+++D+Q K++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
L L + +V EY P + F + R + YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+++D+Q K++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 93 QLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+LG G F V R GL + I KKLS Q L E ++ K+QH N+V
Sbjct: 12 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRKLQHPNIVR 68
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
L E LV++ + L I + S D + + + + Y H
Sbjct: 69 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYCHSNG- 124
Query: 207 ARIIHRDIKASNILLDEQLN---PKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEYA 262
I+HR++K N+LL + K++DFGLA + E H +GT GY++PE
Sbjct: 125 --IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVL 178
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
S D+++ GV++ ++ G
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 93 QLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+LG G F V R GL + I KKLS Q L E ++ K+QH N+V
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRKLQHPNIVR 69
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
L E LV++ + L I + S D + + + + Y H
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYCHSNG- 125
Query: 207 ARIIHRDIKASNILLDEQLN---PKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEYA 262
I+HR++K N+LL + K++DFGLA + E H +GT GY++PE
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVL 179
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
S D+++ GV++ ++ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 110/261 (42%), Gaps = 26/261 (9%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVK---KLSVDSRQGLREFTNEVKLLLKIQ 140
++ + + +LG G +G V G E A+K K SV + +EV +L ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H N++ L+ + LV E L I + K S +D I+ V G Y
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTY 119
Query: 201 LHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTHVNTFRISGTHGYM 257
LH+ I+HRD+K N+LL+ + KI DFGL+ F GT Y+
Sbjct: 120 LHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYI 173
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQGEKALEL 317
APE Y K DV+S GV++ ++ G G+ +E L + EK
Sbjct: 174 APEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQE---------ILKRVEKGKFS 223
Query: 318 VDPSLAKCNRDEAAMCIQLGL 338
DP DEA ++L L
Sbjct: 224 FDPPDWTQVSDEAKQLVKLML 244
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 46/232 (19%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLS-------VDSRQGLREFTNEVKLLLKIQHKNLV 145
LG G V+RG G A+K + VD + +REF ++L K+ HKN+V
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREF----EVLKKLNHKNIV 70
Query: 146 TLFGCCAEGP--EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LF E K+L+ E+ P SL + + + + L + ++ V G+ +L E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 204 EAPARIIHRDIKASNILL----DEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
I+HR+IK NI+ D Q K++DFG AR ++ V+ + GT Y+ P
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY---GTEEYLHP 184
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQG 311
D++ VL RK+H + G DL S T +
Sbjct: 185 ------------DMYERAVL-------RKDHQKKYGA-TVDLWSIGVTFYHA 216
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLLKIQHKNLVTLFG 149
LG G FG VY + I K+ S ++G+ + E+++ ++H N++ ++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 150 CCAEGPEKMLVYEYLPNKSL-----DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L+ E+ P L + FD+ +S++ + +A L Y HE
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELADALHYCHER 133
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHGYMAPEY 261
++IHRDIK N+L+ + KI+DFG + H + R + GT Y+ PE
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 183
Query: 262 ALHGYLSVKTDVFSYGVLVLEIVSG 286
K D++ GVL E + G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+P + F + + R+ + YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 152
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 153 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIIL 204
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDS---RQGLR-EFTNEVKLLLKIQHKNLVTLFG 149
LG G FG VY + I K+ S ++G+ + E+++ ++H N++ ++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 150 CCAEGPEKMLVYEYLPNKSL-----DYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L+ E+ P L + FD+ +S++ + +A L Y HE
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELADALHYCHER 134
Query: 205 APARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFR---ISGTHGYMAPEY 261
++IHRDIK N+L+ + KI+DFG + H + R + GT Y+ PE
Sbjct: 135 ---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 184
Query: 262 ALHGYLSVKTDVFSYGVLVLEIVSG 286
K D++ GVL E + G
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 93 QLGHGGFGPVYR------GLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
+LG G F V R GL + I KKLS Q L E ++ K+QH N+V
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRKLQHPNIVR 69
Query: 147 LFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAP 206
L E LV++ + L I + S D + + + + Y H
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYCHSNG- 125
Query: 207 ARIIHRDIKASNILLDEQLN---PKISDFGLA-RLFPGEDTHVNTFRISGTHGYMAPEYA 262
I+HR++K N+LL + K++DFGLA + E H +GT GY++PE
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLSPEVL 179
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
S D+++ GV++ ++ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI-AVKKLSVDS--RQGLREFTNEVKLLLKIQHKN- 143
F+ L LG G FG V E+ AVK L D + E T K +L + K
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 144 -LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
L L C V EY+ L Y I + +A GL +L
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLAR--LFPGEDTHVNTFRISGTHGYMAPE 260
+ II+RD+K N++LD + + KI+DFG+ + ++ G V T GT Y+APE
Sbjct: 139 SKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYIAPE 191
Query: 261 YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
+ D +++GVL+ E+++G+ +G
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ QG + F N E++++ K+ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIV 76
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 189
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 190 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ QG + F N E++++ K+ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIV 76
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY-YR 189
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 190 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 231
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 26/245 (10%)
Query: 60 SAEDADGSGADSWNLFFDLRTL-------QVATNFFSDLNQLGHGGFGPVYRGLMPNGQE 112
SA+ DG G + +LRT +V F L LG G +G V+ +G +
Sbjct: 22 SADGGDG-GEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHD 80
Query: 113 I-------AVKKLSVDSRQGLREFTNEVKLLLK--IQHKNLVTLFGCCAEGPEKMLVYEY 163
+KK ++ + E T + +L+ Q LVTL + L+ +Y
Sbjct: 81 TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDY 140
Query: 164 LPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDE 223
+ L T S + T + + + V +L L II+RDIK NILLD
Sbjct: 141 INGGEL------FTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS 194
Query: 224 QLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYL--SVKTDVFSYGVLVL 281
+ ++DFGL++ F ++T + GT YMAP+ G D +S GVL+
Sbjct: 195 NGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
Query: 282 EIVSG 286
E+++G
Sbjct: 254 ELLTG 258
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 88 FSDLNQLGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN-EVKLLLKIQHKNLV 145
++D +G+G FG VY+ L +G+ +A+KK+ QG + F N E++++ K+ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIV 76
Query: 146 TL---FGCCAEGPEKM---LVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLL 199
L F E +++ LV +Y+P +L + + R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNP-KISDFGLAR-LFPGEDTHVNTFRISGTHGYM 257
Y+H I HRDIK N+LLD K+ DFG A+ L GE N I + Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY-YR 189
Query: 258 APE--YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
APE + Y S DV+S G ++ E++ G+ G G ++
Sbjct: 190 APELIFGATDYTS-SIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKN 143
NF + LN+ H G +++G G +I VK L V S + R+F E L H N
Sbjct: 13 NFLTKLNE-NHSG--ELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 144 LVTLFGCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
++ + G C P L+ ++P SL Y + + + +D + + + +ARG+ +L
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSL-YNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKIS--DFGLARLFPGEDTHVNTFRISGTHGYMAP 259
H P I + + ++++DE + +IS D + PG R+ ++AP
Sbjct: 128 HTLEPL-IPRHALNSRSVMIDEDMTARISMADVKFSFQSPG--------RMYAP-AWVAP 177
Query: 260 EYALHGYLS----VKTDVFSYGVLVLEIVS 285
E AL D++S+ VL+ E+V+
Sbjct: 178 E-ALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEII 203
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 87 FFSDLNQL----GHGGFGPVYRGL-MPNGQEIAVKKLSV---DSRQGL--REFTNEVKLL 136
F D+ +L G G F V R + GQ+ AVK + V S GL + E +
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 137 LKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL-DWTTRYRIVMGVA 195
++H ++V L + +V+E++ L + I + + + + +
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 196 RGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTHVNTFRISG 252
L Y H+ IIHRD+K N+LL + N K+ DFG+A GE V R+ G
Sbjct: 141 EALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL-GESGLVAGGRV-G 195
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T +MAPE DV+ GV++ ++SG
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+P + F + R + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 100/232 (43%), Gaps = 46/232 (19%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLS-------VDSRQGLREFTNEVKLLLKIQHKNLV 145
LG G V+RG G A+K + VD + +REF ++L K+ HKN+V
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREF----EVLKKLNHKNIV 70
Query: 146 TLFGCCAEGP--EKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LF E K+L+ E+ P SL + + + + L + ++ V G+ +L E
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 204 EAPARIIHRDIKASNILL----DEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
I+HR+IK NI+ D Q K++DFG AR ++ V + GT Y+ P
Sbjct: 131 NG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY---GTEEYLHP 184
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLLSYTWTLFQG 311
D++ VL RK+H + G DL S T +
Sbjct: 185 ------------DMYERAVL-------RKDHQKKYGA-TVDLWSIGVTFYHA 216
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 73 NLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEI--AVKKLSVDSRQGLREFT 130
NL+F T +++ N +G G +G V + + G I A KK+ + + F
Sbjct: 13 NLYFQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFK 71
Query: 131 NEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRI 190
E++++ + H N++ L+ + + LV E L + K D RI
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---RI 128
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILL--DEQLNP-KISDFGL-ARLFPGEDTHVN 246
+ V + Y H+ + HRD+K N L D +P K+ DFGL AR PG+
Sbjct: 129 MKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK 185
Query: 247 TFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GT Y++P+ L G + D +S GV++ ++ G
Sbjct: 186 V----GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 84 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 193
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V G A+K L L++ NE ++L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY P + F + R + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+++D+Q K++DFG A+ G T+ + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 211
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V M G A+K L L++ NE ++L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMG-VARGLLYLH 202
LV L + +V EY+ + F + R + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 203 EEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEII 210
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYF--------IFDKTKSS----SLDWTTRYRI 190
N++ L + P KSL+ F + D S LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYF--------IFDKTKSS----SLDWTTRYRI 190
N++ L + P KSL+ F + D S LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 67 SGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVDSR 123
SG D + NL+F V ++ + +G G + R + E AVK +
Sbjct: 9 SGVDLGTENLYFQS---MVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID---- 61
Query: 124 QGLREFTNEVKLLLKI-QHKNLVTLFGCCAEGPEKMLVYEY-----LPNKSLDYFIFDKT 177
+ R+ + E+++LL+ QH N++TL +G LV E L +K L F +
Sbjct: 62 KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER 121
Query: 178 KSSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNIL-LDEQLNP---KISDFG 233
++S ++ + + + YLH + ++HRD+K SNIL +DE NP +I DFG
Sbjct: 122 EASF--------VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFG 170
Query: 234 LARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
A+ E+ + T T ++APE D++S G+L+ +++G
Sbjct: 171 FAKQLRAENGLLMT--PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 23/170 (13%)
Query: 127 REFTNEVKLLLKI-QHKNLVTLFGCCAEGPEKMLVYEY-----LPNKSLDYFIFDKTKSS 180
R+ + E+++LL+ QH N++TL +G LV E L +K L F + ++S
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 181 SLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNIL-LDEQLNP---KISDFGLAR 236
++ + + + YLH + ++HRD+K SNIL +DE NP +I DFG A+
Sbjct: 125 F--------VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 237 LFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
E+ + T T ++APE D++S G+L+ +++G
Sbjct: 174 QLRAENGLLMT--PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 86 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 133
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + F +
Sbjct: 134 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMVPFVV 189
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 190 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 84 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 193
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYF--------IFDKTKSS----SLDWTTRYRI 190
N++ L + P KSL+ F + D S LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 122 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 178 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 231
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 88 FSDLNQL-----GHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQ- 140
F D+ QL G G V + + QE AVK + EV++L + Q
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H+N++ L E LV+E + S+ I + + L+ + +V VA L +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDF 126
Query: 201 LHEEAPARIIHRDIKASNILLDE--QLNP-KISDFGLAR--LFPGEDTHVNTFRI---SG 252
LH + I HRD+K NIL + Q++P KI DFGL G+ + ++T + G
Sbjct: 127 LHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCG 183
Query: 253 THGYMAPEY--ALHGYLSV---KTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ YMAPE A S+ + D++S GV++ ++SG GR G +
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 84 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 193
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYF--------IFDKTKSS----SLDWTTRYRI 190
N++ L + P KSL+ F + D S LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 84 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGI 139
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 193
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 85 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 132
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 133 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV 188
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 189 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 77 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 133 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 186
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 93 QLGHGGFGPVYRGLMPNGQ------EIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVT 146
++G G F VY+GL E+ +KL+ RQ +E E + L +QH N+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVR 89
Query: 147 LFGC---CAEGPEKM-LVYEYLPNKSLDYFI--FDKTKSSSL-DWTTRYRIVMGVARGLL 199
+ +G + + LV E + +L ++ F K L W + + +GL
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQ 143
Query: 200 YLHEEAPARIIHRDIKASNILLDEQL-NPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH P IIHRD+K NI + + KI D GLA L + GT + A
Sbjct: 144 FLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXA 198
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSG 286
PE Y DV+++G LE +
Sbjct: 199 PEXYEEKY-DESVDVYAFGXCXLEXATS 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 99/269 (36%), Gaps = 78/269 (28%)
Query: 88 FSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKLSVDSRQGLRE-FTNEVKLLLKIQHKNLV 145
F + +G GGFG V+ + A+K++ + +R+ RE EVK L K++H +V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 146 TLFGCCAEGPEKMLVYE----YLPNKSLDYFIFDKT------------------------ 177
F E P + E +L ++S D+ + +
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 178 -----------------KSSSLDWTTR------------YRIVMGVARGLLYLHEEAPAR 208
K + DW R I + +A + +LH +
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG--- 184
Query: 209 IIHRDIKASNILLDEQLNPKISDFGLARLF-------------PGEDTHVNTFRISGTHG 255
++HRD+K SNI K+ DFGL P TH GT
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV---GTKL 241
Query: 256 YMAPEYALHGYLSVKTDVFSYGVLVLEIV 284
YM+PE S K D+FS G+++ E++
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 43/219 (19%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR T +F +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMM 182
Query: 251 SG---THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
+ T Y APE L D++S G ++ E++ G
Sbjct: 183 TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 122 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 178 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 231
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 84 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 193
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV 187
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T Y APE L D++S G ++ E++ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 84 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 193
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 78 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 134 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 187
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 78 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 134 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 187
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 85 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 141 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 194
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 85 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 141 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 194
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 77 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 132
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 133 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 186
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFD----KTKSSSLDWTTRYRIVMGVARGL 198
N+++L P+K L E + L + D + LD ++ + G+
Sbjct: 83 NIISLLNVFT--PQKTL--EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 138
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMA 258
+LH A IIHRD+K SNI++ KI DFGLAR G + + + T Y A
Sbjct: 139 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV--TRYYRA 192
Query: 259 PEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
PE L D++S G ++ E+V + GR
Sbjct: 193 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q K++DFG A+ G T+ + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAP 208
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 66 GSGAD--SWNLFFDLRTLQVATNFFS-DLNQLGHGGFGPVYRGLMPN-GQEIAVKKLSVD 121
SG D + NL+F ++++ NF+ +LG G F V + + + GQE A K L
Sbjct: 8 SSGVDLGTENLYF--QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKR 65
Query: 122 SR-QGLR-EFTNEVKLL-LKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK 178
R Q R E +E+ +L L ++ L E +L+ EY + +
Sbjct: 66 RRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPEL- 124
Query: 179 SSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP----KISDFGL 234
+ + R++ + G+ YLH+ I+H D+K NILL + P KI DFG+
Sbjct: 125 AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLS-SIYPLGDIKIVDFGM 180
Query: 235 ARLFPGEDTHVNTFR-ISGTHGYMAPEYALHGYLSVKTDVFSYGVL 279
+R H R I GT Y+APE + ++ TD+++ G++
Sbjct: 181 SRKI----GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+DEQ +++DFG A+ G T+ + GT Y+AP
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 194
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 23/227 (10%)
Query: 88 FSDLNQLGHGGFGP-VYRGLMPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKI-QHKNLV 145
F + LGHG G VYRG+ N +++AVK++ + EV+LL + +H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDN-RDVAVKRILPEC---FSFADREVQLLRESDEHPNVI 81
Query: 146 TLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSS-SLDWTTRYRIVMGVARGLLYLHEE 204
F C + + + L +L ++ K + L+ T ++ GL +LH
Sbjct: 82 RYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT---LLQQTTSGLAHLHS- 136
Query: 205 APARIIHRDIKASNILLDE-----QLNPKISDFGLA-RLFPGEDTHVNTFRISGTHGYMA 258
I+HRD+K NIL+ ++ ISDFGL +L G + + GT G++A
Sbjct: 137 --LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 259 PEYALHGYLSVKT---DVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
PE T D+FS G + ++S + G+ + +A++L
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL 241
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ ++GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLAGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 43/226 (19%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR T +F +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMM 182
Query: 251 SG---THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T Y APE L D++S G ++ E+V + GR
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 37/223 (16%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 89 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 136
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 137 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV 192
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T Y APE L D++S G ++ E+V + GR
Sbjct: 193 --TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V +G A+K L L++ NE ++L +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+ + F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V +G A+K L L++ NE ++L +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+ + F + + R+ + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 180
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 181 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 232
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 37/223 (16%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 78 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 125
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR G + + +
Sbjct: 126 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVV 181
Query: 251 SGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T Y APE L D++S G ++ E+V + GR
Sbjct: 182 --TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 222
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 92 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 148
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 202
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 92 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 148
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 202
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 91 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 147
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 148 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 201
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 91 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 147
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 148 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 201
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 92 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 148
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 202
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 111 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 167
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 168 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 221
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V +G A+K L L++ NE ++L +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+ + F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V +G A+K L L++ NE ++L +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+ + F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V +G A+K L L++ NE ++L +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+ + F + + R+ + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFAEPHARFYAAQ-IVLTFEYLHS 159
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 211
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQ--HKNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 72 IRLLDWF-ERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHNX 129
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 182
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 215
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 124 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 180
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 181 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 234
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 88 FSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLSVDSRQGLREFT---NEVKLLLKIQHKN 143
F + LG G FG V +G A+K L L++ NE ++L +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
LV L + +V EY+ + F + + R+ + YLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 154
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYAL 263
+I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+APE L
Sbjct: 155 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEIIL 206
Query: 264 HGYLSVKTDVFSYGVLVLEIVSG 286
+ D ++ GVL+ E+ +G
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 215
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 119 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 175
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 176 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 229
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 215
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 214
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 214
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 119 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 175
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 176 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 229
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 105 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 215
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLXGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 76 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 132
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 133 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 186
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 77 IRLLDWF-ERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 133
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 134 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 187
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 214
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 208
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 77 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 133
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 134 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 187
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 104 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 214
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 77 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 133
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 134 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 187
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 43/226 (19%)
Query: 88 FSDLNQLGHGGFGPV---YRGLMPNGQEIAVKKLS--VDSRQGLREFTNEVKLLLKIQHK 142
+ +L +G G G V Y ++ + +A+KKLS ++ + E+ L+ + HK
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLD-----YFIFD-------KTKSSSLDWTTRYRI 190
N++ L + P KSL+ Y + + + LD +
Sbjct: 84 NIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 191 VMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRI 250
+ + G+ +LH A IIHRD+K SNI++ KI DFGLAR T +F +
Sbjct: 132 LYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMM 182
Query: 251 SG---THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGR 293
T Y APE L D++S G ++ E+V + GR
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 228
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQ--HKNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 75 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 131
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 132 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 185
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQ--HKNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 128
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 129 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 182
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 66 GSGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS- 122
SG D + NL+F +++ V +S L Q+G GG V++ L Q A+K ++++
Sbjct: 8 SSGVDLGTENLYF--QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 65
Query: 123 -RQGLREFTNEVKLLLKIQHKN--LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
Q L + NE+ L K+Q + ++ L+ +V E N L+ ++ K
Sbjct: 66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKK 121
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP 239
S+D R + + +H+ I+H D+K +N L+ + + K+ DFG+A
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQ 177
Query: 240 GEDTHVNTFRISGTHGYMAPE 260
+ T V GT YM PE
Sbjct: 178 PDTTSVVKDSQVGTVNYMPPE 198
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 78 LRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKL----SVDSRQGLREFTNEV 133
+R LQ+ + + +G G FG V Q++ KL + R F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 134 KLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL-----DYFIFDKTKSSSLDWTTRY 188
++ +V LF + +V EY+P L +Y + +K W Y
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK-------WAKFY 179
Query: 189 RIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTF 248
A +L L +IHRD+K N+LLD+ + K++DFG + E V+
Sbjct: 180 -----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCD 233
Query: 249 RISGTHGYMAPEYAL----HGYLSVKTDVFSYGVLVLEIVSG 286
GT Y++PE GY + D +S GV + E++ G
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-----TWTLCGTPEYLAP 228
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQ--HKNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 128
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 129 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 182
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQ--HKNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 145 VTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
+ L E P+ ++ P D F F T+ +L V + + H
Sbjct: 99 IRLLDW-FERPDSFVLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHN- 155
Query: 205 APARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA- 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 156 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWIR 209
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEI--AVKKLSVDSRQGLREFTNEVKLLLKIQHKN 143
+++ N +G G +G V + + G I A KK+ + + F E++++ + H N
Sbjct: 9 QYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
++ L+ + + LV E L + K D RI+ V + Y H+
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---RIMKDVLSAVAYCHK 124
Query: 204 EAPARIIHRDIKASNILL--DEQLNP-KISDFGL-ARLFPGEDTHVNTFRISGTHGYMAP 259
+ HRD+K N L D +P K+ DFGL AR PG+ GT Y++P
Sbjct: 125 ---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV----GTPYYVSP 177
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
+ L G + D +S GV++ ++ G
Sbjct: 178 Q-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 27/239 (11%)
Query: 73 NLFFDLRTLQVATNFFSDLNQLGHGGFGPV--YRGLMPNGQEIAVKKLSVDSRQGLREFT 130
NL+F + + + + +LG GGF V GL +G A+K++ +Q E
Sbjct: 16 NLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLH-DGHFYALKRILCHEQQDREEAQ 74
Query: 131 NEVKLLLKIQHKNLVTLFGCC----AEGPEKMLVYEYLPNKSLDYFIFD-KTKSSSLDWT 185
E + H N++ L C E L+ + +L I K K + L
Sbjct: 75 READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 134
Query: 186 TRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHV 245
+++G+ RGL +H + A HRD+K +NILL ++ P + D G HV
Sbjct: 135 QILWLLLGICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMN---QACIHV 188
Query: 246 NTFRIS----------GTHGYMAPE---YALHGYLSVKTDVFSYGVLVLEIVSGRKNHD 291
R + T Y APE H + +TDV+S G ++ ++ G +D
Sbjct: 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 94 LGHGGFGPVYRG-LMPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQ----HK 142
LG GGFG V+ G + + ++A+K + + G ++ EV LL K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 143 NLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLH 202
++ L MLV E P + D F + K + +R VA + + H
Sbjct: 99 GVIRLLDWFETQEGFMLVLER-PLPAQDLFDYITEKGPLGEGPSRCFFGQVVA-AIQHCH 156
Query: 203 EEAPARIIHRDIKASNILLDEQLN-PKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEY 261
++HRDIK NIL+D + K+ DFG L D F GT Y PE+
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL--HDEPYTDF--DGTRVYSPPEW 209
Query: 262 -ALHGYLSVKTDVFSYGVLVLEIVSG 286
+ H Y ++ V+S G+L+ ++V G
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 88 FSDLNQL-----GHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQ- 140
F D+ QL G G V + + QE AVK + EV++L + Q
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 141 HKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLY 200
H+N++ L E LV+E + S+ I + + L+ + +V VA L +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDF 126
Query: 201 LHEEAPARIIHRDIKASNILLDE--QLNP-KISDFGLAR--LFPGEDTHVNTFRI---SG 252
LH + I HRD+K NIL + Q++P KI DF L G+ + ++T + G
Sbjct: 127 LHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 253 THGYMAPEY--ALHGYLSV---KTDVFSYGVLVLEIVSGRKNHDGRLGKE 297
+ YMAPE A S+ + D++S GV++ ++SG GR G +
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 46/246 (18%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTN----EVKLLLKIQ-HKNLVTLF 148
LG+G G V G+ +AVK++ +D F + E+KLL + H N++ +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYY 93
Query: 149 GCCAEGPEKML-VYEYLPNKSLDYFIFDKTKS-SSLDWTTRYR---IVMGVARGLLYLHE 203
C+E ++ L + L N +L + K S +L Y ++ +A G+ +LH
Sbjct: 94 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 204 EAPARIIHRDIKASNILLD-------------EQLNPKISDFGLARLFPGEDTHVNTFRI 250
+IIHRD+K NIL+ E L ISDFGL + D+ FR
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRX 205
Query: 251 -----SGTHGYMAPEY---ALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
SGT G+ APE + L+ D+FS G + I+S K+ G +++++
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 303 SYTWTL 308
++L
Sbjct: 266 RGIFSL 271
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 46/246 (18%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTN----EVKLLLKIQ-HKNLVTLF 148
LG+G G V G+ +AVK++ +D F + E+KLL + H N++ +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYY 93
Query: 149 GCCAEGPEKML-VYEYLPNKSLDYFIFDKTKS-SSLDWTTRYR---IVMGVARGLLYLHE 203
C+E ++ L + L N +L + K S +L Y ++ +A G+ +LH
Sbjct: 94 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 204 EAPARIIHRDIKASNILLD-------------EQLNPKISDFGLARLFPGEDTHVNTFRI 250
+IIHRD+K NIL+ E L ISDFGL + D+ FR
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRX 205
Query: 251 -----SGTHGYMAPEY---ALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEKADLL 302
SGT G+ APE + L+ D+FS G + I+S K+ G +++++
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 303 SYTWTL 308
++L
Sbjct: 266 RGIFSL 271
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEI--AVK---KLSVDSRQGLREFTNEVKLLLK-IQH 141
F L +G G FG V +E+ AVK K ++ ++ + +E +LLK ++H
Sbjct: 40 FHFLKVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 142 KNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
LV L + V +Y+ L Y + + + L+ R+ +A L YL
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARF-YAAEIASALGYL 155
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEY 261
H I++RD+K NILLD Q + ++DFGL + ++ +TF GT Y+APE
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF--CGTPEYLAPEV 210
Query: 262 ALHGYLSVKTDVFSYGVLVLEIVSG 286
D + G ++ E++ G
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + + + Y +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYG--AEIVSA 117
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH +++RDIK N++LD+ + KI+DFGL + + + TF GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--CGTPEYL 172
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + + + Y +
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYG--AEIVSA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH +++RDIK N++LD+ + KI+DFGL + + + TF GT Y+
Sbjct: 121 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--CGTPEYL 175
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + S D Y +
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGA--EIVSA 121
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH E +++RD+K N++LD+ + KI+DFGL + + + F GT Y+
Sbjct: 122 LDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF--CGTPEYL 177
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + S D Y +
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGA--EIVSA 122
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH E +++RD+K N++LD+ + KI+DFGL + + + F GT Y+
Sbjct: 123 LDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF--CGTPEYL 178
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 125 GLREFTNEVKLLLKIQHKNLVTLFGCC-AEGPEKM-LVYEYLPNKSLDYFIFDKTKSSSL 182
G E++LL +++HKN++ L E +KM +V EY + + D
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRF 106
Query: 183 DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARL---FP 239
+ + GL YLH + I+H+DIK N+LL KIS G+A F
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 240 GEDTHVNTFRISGTHGYMAPEYA--LHGYLSVKTDVFSYGVLVLEIVSGRKNHDG 292
+DT + G+ + PE A L + K D++S GV + I +G +G
Sbjct: 164 ADDTCRTS---QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTN------EVKLLLKIQH--KNL 144
LG GGFG VY G+ + + +A+K + D E N EV LL K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 145 VTLFGCCAEGPEKMLVYEYL-PNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
+ L +L+ E + P + L FI T+ +L V + + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGALQEELARSFFWQVLEAVRHCHN 132
Query: 204 EAPARIIHRDIKASNILLD-EQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYA 262
++HRDIK NIL+D + K+ DFG L +DT F GT Y PE+
Sbjct: 133 ---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDF--DGTRVYSPPEWI 185
Query: 263 -LHGYLSVKTDVFSYGVLVLEIVSG 286
H Y V+S G+L+ ++V G
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVY-RGLMPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + S D Y +
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGA--EIVSA 120
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH E +++RD+K N++LD+ + KI+DFGL + + + F GT Y+
Sbjct: 121 LDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF--CGTPEYL 176
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + + + Y +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYG--AEIVSA 117
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH +++RDIK N++LD+ + KI+DFGL + + + TF GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF--CGTPEYL 172
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 50/250 (20%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTN----EVKLLLKIQ-HKNLVTLF 148
LG+G G V G+ +AVK++ +D F + E+KLL + H N++ +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYY 75
Query: 149 GCCAEGPEKML-VYEYLPNKSLDYFIFDKTKS-SSLDWTTRYR---IVMGVARGLLYLHE 203
C+E ++ L + L N +L + K S +L Y ++ +A G+ +LH
Sbjct: 76 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 204 EAPARIIHRDIKASNILLD-------------EQLNPKISDFGLARLFPGEDTHVNTFRI 250
+IIHRD+K NIL+ E L ISDFGL + D+ ++FR
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQSSFRT 187
Query: 251 -----SGTHGYMAPE-------YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
SGT G+ APE L+ D+FS G + I+S K+ G +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 299 ADLLSYTWTL 308
++++ ++L
Sbjct: 248 SNIIRGIFSL 257
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+++D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E + + D ++ GVL+ E+ +G
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 54/256 (21%)
Query: 73 NLFFD-LRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQE-IAVKKLS------VDSRQ 124
NL+F ++ + V N+ + +G G +G VY N ++ +A+KK++ +D ++
Sbjct: 13 NLYFQGIKNVHVPDNYIIK-HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR 71
Query: 125 GLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS----- 179
LRE T +L +++ ++ L+ P+ +L ++ L Y + + S
Sbjct: 72 ILREIT----ILNRLKSDYIIRLYDLII--PDDLLKFDEL------YIVLEIADSDLKKL 119
Query: 180 --SSLDWTTRY--RIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLA 235
+ + T + I+ + G ++HE IIHRD+K +N LL++ + K+ DFGLA
Sbjct: 120 FKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA 176
Query: 236 RLFPGE-DTH-VNTFRIS---GTHG---------------YMAPEYALHGYLSVKT-DVF 274
R E DT+ VN + G H Y APE L K+ D++
Sbjct: 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIW 236
Query: 275 SYGVLVLEIVSGRKNH 290
S G + E+++ ++H
Sbjct: 237 STGCIFAELLNMLQSH 252
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 61/262 (23%)
Query: 73 NLFFD---LRTLQVATNFFSDLNQL-GHGGFGPVYRGLMPNG-QEIAVKKLS------VD 121
NL+F ++ ++V N+ ++ L G G +G VY N + +A+KK++ +D
Sbjct: 13 NLYFQGAIIKNVKVPDNY--EIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLID 70
Query: 122 SRQGLREFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS-- 179
++ LRE T +L +++ ++ L PE +L ++ L Y + + S
Sbjct: 71 CKRILREIT----ILNRLKSDYIIRLHDLII--PEDLLKFDEL------YIVLEIADSDL 118
Query: 180 -----SSLDWTTRY--RIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDF 232
+ + T ++ I+ + G ++HE IIHRD+K +N LL++ + KI DF
Sbjct: 119 KKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDF 175
Query: 233 GLARLFPGE-DTHV-------NTFRISGTHG---------------YMAPEYA-LHGYLS 268
GLAR + D H+ G H Y APE L +
Sbjct: 176 GLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYT 235
Query: 269 VKTDVFSYGVLVLEIVSGRKNH 290
D++S G + E+++ K+H
Sbjct: 236 NSIDIWSTGCIFAELLNMMKSH 257
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 66 GSGAD--SWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS- 122
SG D + NL+F +++ V +S L Q+G GG V++ L Q A+K ++++
Sbjct: 8 SSGVDLGTENLYF--QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 65
Query: 123 -RQGLREFTNEVKLLLKIQHKN--LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
Q L + NE+ L K+Q + ++ L+ +V E N L+ ++ K
Sbjct: 66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKK 121
Query: 180 SSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFP 239
S+D R + + +H+ I+H D+K +N L+ + + K+ DFG+A
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQ 177
Query: 240 GEDTHVNTFRISGTHGYMAPE 260
+ V GT YM PE
Sbjct: 178 PDXXXVVKDSQVGTVNYMPPE 198
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 24/231 (10%)
Query: 66 GSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSV---D 121
GS AD LF D+ L +G G F V R + GQ+ AVK + V
Sbjct: 15 GSMADDDVLFEDVYEL---------CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT 65
Query: 122 SRQGL--REFTNEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKS 179
S GL + E + ++H ++V L + +V+E++ L + I + +
Sbjct: 66 SSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA 125
Query: 180 SSL-DWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLA 235
+ + + L Y H+ IIHRD+K +LL + N K+ FG+A
Sbjct: 126 GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
Query: 236 RLFPGEDTHVNTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
GE V R+ GT +MAPE DV+ GV++ ++SG
Sbjct: 183 IQL-GESGLVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
L + D ++ GVL+ E+ +G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 86 NFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVD--SRQGLREFTNEVKLLLKIQHKN 143
NF + LN+ H G +++G G +I VK L V S + R+F E L H N
Sbjct: 13 NFLTKLNE-NHSG--ELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 144 LVTLFGCC--AEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYL 201
++ + G C P L+ + P SL Y + + + +D + + + ARG +L
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWXPYGSL-YNVLHEGTNFVVDQSQAVKFALDXARGXAFL 127
Query: 202 HEEAPARIIHRDIKASNILLDEQLNPKIS--DFGLARLFPGEDTHVNTFRISGTHGYMAP 259
H P I + + ++ +DE +IS D + PG ++AP
Sbjct: 128 HTLEPL-IPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXY---------APAWVAP 177
Query: 260 EYALHGYLS----VKTDVFSYGVLVLEIVS 285
E AL D +S+ VL+ E+V+
Sbjct: 178 E-ALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 94 LGHGGFGPVYRGL-MPNGQEIAVKKLSVDSRQGLREFTNEVKLLLKIQHKNLVTLFGCCA 152
LG G F + + + Q AVK +S ++ +KL H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFH 76
Query: 153 EGPEKMLVYEYLPNKSLDYFIFDKTKSSS-LDWTTRYRIVMGVARGLLYLHEEAPARIIH 211
+ LV E L L F++ K T I+ + + ++H+ ++H
Sbjct: 77 DQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVH 129
Query: 212 RDIKASNILL---DEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAPEYALHGYLS 268
RD+K N+L ++ L KI DFG ARL P ++ + T T Y APE
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFTLHYAAPELLNQNGYD 187
Query: 269 VKTDVFSYGVLVLEIVSGR---KNHDGRL 294
D++S GV++ ++SG+ ++HD L
Sbjct: 188 ESCDLWSLGVILYTMLSGQVPFQSHDRSL 216
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + + + Y +
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYG--AEIVSA 122
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH +++RDIK N++LD+ + KI+DFGL + + + F GT Y+
Sbjct: 123 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEYL 177
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 50/250 (20%)
Query: 94 LGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTN----EVKLLLKIQ-HKNLVTLF 148
LG+G G V G+ +AVK++ +D F + E+KLL + H N++ +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYY 75
Query: 149 GCCAEGPEKML-VYEYLPNKSLDYFIFDKTKS-SSLDWTTRYR---IVMGVARGLLYLHE 203
C+E ++ L + L N +L + K S +L Y ++ +A G+ +LH
Sbjct: 76 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 204 EAPARIIHRDIKASNILLD-------------EQLNPKISDFGLARLFPGEDTHVNTFRI 250
+IIHRD+K NIL+ E L ISDFGL + D+ FR
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRX 187
Query: 251 -----SGTHGYMAPE-------YALHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRLGKEK 298
SGT G+ APE L+ D+FS G + I+S K+ G +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 299 ADLLSYTWTL 308
++++ ++L
Sbjct: 248 SNIIRGIFSL 257
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + + + Y +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYG--AEIVSA 117
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH +++RDIK N++LD+ + KI+DFGL + + + F GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEYL 172
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 200 YLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYMAP 259
YLH +I+RD+K N+L+D+Q +++DFG A+ G T+ + GT +AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEALAP 207
Query: 260 EYALHGYLSVKTDVFSYGVLVLEIVSG 286
E L + D ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + + + Y +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYG--AEIVSA 117
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH +++RDIK N++LD+ + KI+DFGL + + + F GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEYL 172
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKL------SVDSRQGLREFTNEVKLLL 137
T F +L ++G G FG V++ + +G A+K+ SVD + LRE L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL------DYFIFDKTKSSSLDWTTRYRIV 191
QH ++V F AE ++ EY SL +Y I K + L ++
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-----DLL 119
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP 227
+ V RGL Y+H + ++H DIK SNI + P
Sbjct: 120 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKL------SVDSRQGLREFTNEVKLLL 137
T F +L ++G G FG V++ + +G A+K+ SVD + LRE L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 68
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL------DYFIFDKTKSSSLDWTTRYRIV 191
QH ++V F AE ++ EY SL +Y I K + L ++
Sbjct: 69 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-----DLL 121
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP 227
+ V RGL Y+H + ++H DIK SNI + P
Sbjct: 122 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 154
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 82 QVATNFFSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLS---VDSRQGLREFTNEVKLLL 137
+V N F L LG G FG V G+ A+K L + ++ + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARG 197
+H L L V EY L +F + + + + Y +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYG--AEIVSA 117
Query: 198 LLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGYM 257
L YLH +++RDIK N++LD+ + KI+DFGL + + + F GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF--CGTPEYL 172
Query: 258 APEYALHGYLSVKTDVFSYGVLVLEIVSGR 287
APE D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKL------SVDSRQGLREFTNEVKLLL 137
T F +L ++G G FG V++ + +G A+K+ SVD + LRE L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL------DYFIFDKTKSSSLDWTTRYRIV 191
QH ++V F AE ++ EY SL +Y I K + L ++
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-----DLL 119
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP 227
+ V RGL Y+H + ++H DIK SNI + P
Sbjct: 120 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 85 TNFFSDLNQLGHGGFGPVYRGLMP-NGQEIAVKKL------SVDSRQGLREFTNEVKLLL 137
T F +L ++G G FG V++ + +G A+K+ SVD + LRE L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 64
Query: 138 KIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSL------DYFIFDKTKSSSLDWTTRYRIV 191
QH ++V F AE ++ EY SL +Y I K + L ++
Sbjct: 65 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-----DLL 117
Query: 192 MGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP 227
+ V RGL Y+H + ++H DIK SNI + P
Sbjct: 118 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 150
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 87 FFSDLNQL----GHGGFGPVYRGL-MPNGQEIAVKKLSV---DSRQGL--REFTNEVKLL 136
F D+ +L G G F V R + GQ+ AVK + V S GL + E +
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 137 LKIQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSL-DWTTRYRIVMGVA 195
++H ++V L + +V+E++ L + I + + + + +
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 196 RGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTHVNTFRISG 252
L Y H+ IIHRD+K +LL + N K+ FG+A GE V R+ G
Sbjct: 141 EALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGRV-G 195
Query: 253 THGYMAPEYALHGYLSVKTDVFSYGVLVLEIVSG 286
T +MAPE DV+ GV++ ++SG
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
D D + S N + V +S L Q+G GG V++ L Q A+K ++++
Sbjct: 38 DDDDKASSSAN-----ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE 92
Query: 123 --RQGLREFTNEVKLLLKIQHKN--LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK 178
Q L + NE+ L K+Q + ++ L+ +V E N L+ ++ K
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KK 148
Query: 179 SSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF 238
S+D R + + +H+ I+H D+K +N L+ + + K+ DFG+A
Sbjct: 149 KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQM 204
Query: 239 PGEDTHVNTFRISGTHGYMAPE 260
+ T V GT YM PE
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 63 DADGSGADSWNLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS 122
D D + S N + V +S L Q+G GG V++ L Q A+K ++++
Sbjct: 38 DDDDKASSSAN-----ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE 92
Query: 123 --RQGLREFTNEVKLLLKIQHKN--LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTK 178
Q L + NE+ L K+Q + ++ L+ +V E N L+ ++ K
Sbjct: 93 ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KK 148
Query: 179 SSSLDWTTRYRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLF 238
S+D R + + +H+ I+H D+K +N L+ + + K+ DFG+A
Sbjct: 149 KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQM 204
Query: 239 PGEDTHVNTFRISGTHGYMAPE 260
+ T V GT YM PE
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 37/278 (13%)
Query: 94 LGHGGFGPVYRGL--MPNGQEIAVKKL--SVDSRQGLREFTNEVKLLLKIQHKNLVTLFG 149
+ HGG G +Y L NG+ + +K L S D+ + L ++ H ++V +F
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAER-QFLAEVVHPSIVQIFN 146
Query: 150 CCAE-----GPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHEE 204
P +V EY+ +SL ++K L ++ + L YLH
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLK-----RSKGQKLPVAEAIAYLLEILPALSYLHSI 201
Query: 205 APARIIHRDIKASNILL-DEQLNPKISDFGLARLFPGEDTHVNTF-RISGTHGYMAPEYA 262
+++ D+K NI+L +EQL K+ D G + +N+F + GT G+ APE
Sbjct: 202 G---LVYNDLKPENIMLTEEQL--KLIDLGAV-------SRINSFGYLYGTPGFQAPEIV 249
Query: 263 LHGYLSVKTDVFSYGVLVLEIVSGRKNHDGRL--GKEKADLLSYTWTLFQGEKALELVDP 320
G +V TD+++ G + + +GR G + D + T+ + G +DP
Sbjct: 250 RTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSY-GRLLRRAIDP 307
Query: 321 SLAKCNRDEAAMCIQL-GLL---CCQQSVAERPDMNSV 354
+ M QL G+L Q + RP ++++
Sbjct: 308 DPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTI 345
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTH 244
Y++++ V YLHE IIHRD+K N+LL Q KI+DFG +++ GE +
Sbjct: 121 YQMLLAVQ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL 172
Query: 245 VNTFRISGTHGYMAPEYALH----GYLSVKTDVFSYGVLVLEIVSG---------RKNHD 291
+ T + GT Y+APE + GY + D +S GV++ +SG + +
Sbjct: 173 MRT--LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 292 GRLGKEKADLLSYTWTLFQGEKALELV 318
++ K + + W EKAL+LV
Sbjct: 230 DQITSGKYNFIPEVWAEV-SEKALDLV 255
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTH 244
Y++++ V YLHE IIHRD+K N+LL Q KI+DFG +++ GE +
Sbjct: 121 YQMLLAVQ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL 172
Query: 245 VNTFRISGTHGYMAPEYALH----GYLSVKTDVFSYGVLVLEIVSG---------RKNHD 291
+ T + GT Y+APE + GY + D +S GV++ +SG + +
Sbjct: 173 MRT--LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 292 GRLGKEKADLLSYTWTLFQGEKALELV 318
++ K + + W EKAL+LV
Sbjct: 230 DQITSGKYNFIPEVWAEV-SEKALDLV 255
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTH 244
Y++++ V YLHE IIHRD+K N+LL Q KI+DFG +++ GE +
Sbjct: 120 YQMLLAVQ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL 171
Query: 245 VNTFRISGTHGYMAPEYALH----GYLSVKTDVFSYGVLVLEIVSG---------RKNHD 291
+ T + GT Y+APE + GY + D +S GV++ +SG + +
Sbjct: 172 MRT--LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 228
Query: 292 GRLGKEKADLLSYTWTLFQGEKALELV 318
++ K + + W EKAL+LV
Sbjct: 229 DQITSGKYNFIPEVWAEV-SEKALDLV 254
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTH 244
Y++++ V YLHE IIHRD+K N+LL Q KI+DFG +++ GE +
Sbjct: 121 YQMLLAVQ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL 172
Query: 245 VNTFRISGTHGYMAPEYALH----GYLSVKTDVFSYGVLVLEIVSG---------RKNHD 291
+ T + GT Y+APE + GY + D +S GV++ +SG + +
Sbjct: 173 MRT--LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 292 GRLGKEKADLLSYTWTLFQGEKALELV 318
++ K + + W EKAL+LV
Sbjct: 230 DQITSGKYNFIPEVWAEV-SEKALDLV 255
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTH 244
Y++++ V YLHE IIHRD+K N+LL Q KI+DFG +++ GE +
Sbjct: 127 YQMLLAVQ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL 178
Query: 245 VNTFRISGTHGYMAPEYALH----GYLSVKTDVFSYGVLVLEIVSG---------RKNHD 291
+ T + GT Y+APE + GY + D +S GV++ +SG + +
Sbjct: 179 MRT--LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 235
Query: 292 GRLGKEKADLLSYTWTLFQGEKALELV 318
++ K + + W EKAL+LV
Sbjct: 236 DQITSGKYNFIPEVWAEV-SEKALDLV 261
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS--RQGLREFTNEVKLLLK 138
+ V +S L Q+G GG V++ L Q A+K ++++ Q L + NE+ L K
Sbjct: 4 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
Query: 139 IQHKN--LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVAR 196
+Q + ++ L+ +V E N L+ ++ K S+D R +
Sbjct: 64 LQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLE 119
Query: 197 GLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGY 256
+ +H+ I+H D+K +N L+ + + K+ DFG+A + T V GT Y
Sbjct: 120 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 257 MAPE 260
M PE
Sbjct: 176 MPPE 179
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS--RQGLREFTNEVKLLLK 138
+ V +S L Q+G GG V++ L Q A+K ++++ Q L + NE+ L K
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 139 IQHKN--LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVAR 196
+Q + ++ L+ +V E N L+ ++ K S+D R +
Sbjct: 63 LQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLE 118
Query: 197 GLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGY 256
+ +H+ I+H D+K +N L+ + + K+ DFG+A + T V GT Y
Sbjct: 119 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 257 MAPE 260
M PE
Sbjct: 175 MPPE 178
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 88 FSDLNQLGHGGFGPVYRGL-MPNGQEIAVKKLSVD--------SRQGLREFTNEVKLLLK 138
+S ++ LG G FG V+ + +E+ VK + + L + T E+ +L +
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 139 IQHKNLVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGL 198
++H N++ + LV E LD F F + LD I + +
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEK-HGSGLDLFAF-IDRHPRLDEPLASYIFRQLVSAV 143
Query: 199 LYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLA------RLFPGEDTHVNTFRISG 252
YL + IIHRDIK NI++ E K+ DFG A +LF + G
Sbjct: 144 GYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF---------YTFCG 191
Query: 253 THGYMAPEYAL-HGYLSVKTDVFSYGVLVLEIV 284
T Y APE + + Y + +++S GV + +V
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 28/147 (19%)
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTH 244
Y++++ V YLHE IIHRD+K N+LL Q KI+DFG +++ GE +
Sbjct: 260 YQMLLAVQ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL 311
Query: 245 VNTFRISGTHGYMAPEYALH----GYLSVKTDVFSYGVLVLEIVSG---------RKNHD 291
+ T + GT Y+APE + GY + D +S GV++ +SG + +
Sbjct: 312 MRT--LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 368
Query: 292 GRLGKEKADLLSYTWTLFQGEKALELV 318
++ K + + W EKAL+LV
Sbjct: 369 DQITSGKYNFIPEVWAEV-SEKALDLV 394
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 18/106 (16%)
Query: 188 YRIVMGVARGLLYLHEEAPARIIHRDIKASNILLDEQLNP---KISDFGLARLFPGEDTH 244
Y++++ V YLHE IIHRD+K N+LL Q KI+DFG +++ GE +
Sbjct: 246 YQMLLAVQ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL 297
Query: 245 VNTFRISGTHGYMAPEYALH----GYLSVKTDVFSYGVLVLEIVSG 286
+ T + GT Y+APE + GY + D +S GV++ +SG
Sbjct: 298 MRT--LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 340
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 81 LQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDS--RQGLREFTNEVKLLLK 138
+ V +S L Q+G GG V++ L Q A+K ++++ Q L + NE+ L K
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 139 IQHKN--LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVAR 196
+Q + ++ L+ +V E N L+ ++ K S+D R +
Sbjct: 67 LQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLE 122
Query: 197 GLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGEDTHVNTFRISGTHGY 256
+ +H+ I+H D+K +N L+ + + K+ DFG+A + T V GT Y
Sbjct: 123 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 257 MAPE 260
M PE
Sbjct: 179 MPPE 182
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 88 FSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFTN---EVKLLLKI-QHKN 143
F L++LGHG +G V++ + K S+ +G ++ EV K+ QH
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 144 LVTLFGCCAEGPEKMLVYEYLPNKSLDYFIFDKTKSSSLDWTTRYRIVMGVARGLLYLHE 203
V L EG L E L SL + +SL + + L +LH
Sbjct: 119 CVRLEQAWEEGGILYLQTE-LCGPSLQQHC--EAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 204 EAPARIIHRDIKASNILLDEQLNPKISDFG-LARLFPGEDTHVNTFRISGTHGYMAPEYA 262
+ ++H D+K +NI L + K+ DFG L L V G YMAPE
Sbjct: 176 QG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ----EGDPRYMAPEL- 227
Query: 263 LHGYLSVKTDVFSYGVLVLEIV 284
L G DVFS G+ +LE+
Sbjct: 228 LQGSYGTAADVFSLGLTILEVA 249
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 73 NLFFDLRTLQVATNFFSDLNQLGHGGFGPVYRGLMPNGQEIAVKKLSVDSRQGLREFT-- 130
NL+F +L + +G G +G V + Q A++ + + ++ +R+
Sbjct: 13 NLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPK 70
Query: 131 ------NEVKLLLKIQHKNLVTLFGCCAEGPEKMLVYE-----YLPNKSLDYFIFDKTKS 179
EV+L+ K+ H N+ L+ + LV E +L +K L+ FI D T
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK-LNVFIDDSTGK 129
Query: 180 -----------------------------SSLDWTTRYRIVMGVAR----GLLYLHEEAP 206
SLD+ R +++ + R L YLH +
Sbjct: 130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG- 188
Query: 207 ARIIHRDIKASNILL--DEQLNPKISDFGLARLF----PGEDTHVNTFRISGTHGYMAPE 260
I HRDIK N L ++ K+ DFGL++ F GE + T +GT ++APE
Sbjct: 189 --ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT--KAGTPYFVAPE 244
Query: 261 Y--ALHGYLSVKTDVFSYGVLVLEIVSG 286
+ K D +S GVL+ ++ G
Sbjct: 245 VLNTTNESYGPKCDAWSAGVLLHLLLMG 272
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,206,544
Number of Sequences: 62578
Number of extensions: 487391
Number of successful extensions: 3235
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 995
Number of HSP's gapped (non-prelim): 1123
length of query: 437
length of database: 14,973,337
effective HSP length: 102
effective length of query: 335
effective length of database: 8,590,381
effective search space: 2877777635
effective search space used: 2877777635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)