BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013750
(437 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/326 (66%), Positives = 256/326 (78%)
Query: 83 FVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVK 142
F DV E D + GQLKR+S RELQ+A+DNFS KN+LG+GGFGKVY+G LADGT VAVK
Sbjct: 9 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK 68
Query: 143 RLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE 202
RL + GG+ FQ EVEMIS+AVHRNLLRL GFC TPTERLLVYP+M N SVA LRE
Sbjct: 69 RLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 128
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
+P LDW R+R+ALG+ARGL YLH+HC+PKIIHRDVKAAN+LLDE+FEAVVGDFGL
Sbjct: 129 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRX 322
AKL+D + +V VRGT+GHIAPEYLSTGKSSE+TDVFGYG+MLLEL+TGQRA D +R
Sbjct: 189 AKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
Query: 323 XXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS 382
+EK+L+A+VD +L NY +EVE +IQVALLCTQ+SP +RP MS
Sbjct: 249 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
Query: 383 EVVRMLEGEGLAERWEEWQHVEVTRR 408
EVVRMLEG+GLAERWEEWQ E+ R+
Sbjct: 309 EVVRMLEGDGLAERWEEWQKEEMFRQ 334
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/326 (65%), Positives = 254/326 (77%)
Query: 83 FVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVK 142
F DV E D + GQLKR+S RELQ+A+DNF KN+LG+GGFGKVY+G LADG VAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 143 RLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE 202
RL + + GG+ FQ EVEMIS+AVHRNLLRL GFC TPTERLLVYP+M N SVA LRE
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
+P LDW R+R+ALG+ARGL YLH+HC+PKIIHRDVKAAN+LLDE+FEAVVGDFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRX 322
AKL+D + +V VRG +GHIAPEYLSTGKSSE+TDVFGYG+MLLEL+TGQRA D +R
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 323 XXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS 382
+EK+L+A+VD +L NY +EVE +IQVALLCTQ+SP +RP MS
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 383 EVVRMLEGEGLAERWEEWQHVEVTRR 408
EVVRMLEG+GLAERWEEWQ E+ R+
Sbjct: 301 EVVRMLEGDGLAERWEEWQKEEMFRQ 326
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 162/285 (56%), Gaps = 7/285 (2%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV 165
+L+ AT+NF K ++G G FGKVY+GVL DG KVA+KR T ES G F+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP-ESSQGIEEFETEIETLSF 91
Query: 166 AVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARG 225
H +L+ LIGFC E +L+Y +M+N ++ L + W R + +GAARG
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL-VDVRKTNVTTQVRGTMGHI 284
L YLH IIHRDVK+ N+LLDE+F + DFG++K ++ +T++ V+GT+G+I
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
PEY G+ +E++DV+ +G++L E++ + AI + +L+
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI--VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
IVD NL + + A+ C S EDRP+M +V+ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 162/285 (56%), Gaps = 7/285 (2%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV 165
+L+ AT+NF K ++G G FGKVY+GVL DG KVA+KR T ES G F+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP-ESSQGIEEFETEIETLSF 91
Query: 166 AVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARG 225
H +L+ LIGFC E +L+Y +M+N ++ L + W R + +GAARG
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL-VDVRKTNVTTQVRGTMGHI 284
L YLH IIHRDVK+ N+LLDE+F + DFG++K ++ +T++ V+GT+G+I
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
PEY G+ +E++DV+ +G++L E++ + AI + +L+
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI--VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
IVD NL + + A+ C S EDRP+M +V+ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 167/298 (56%), Gaps = 20/298 (6%)
Query: 102 YSWRELQLATDNFSEK------NVLGQGGFGKVYRGVLADGTKVAVKRLT---DFESPGG 152
+S+ EL+ T+NF E+ N +G+GGFG VY+G + + T VAVK+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 153 DAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDW 212
F +E+++++ H NL+ L+GF + + LVY +M N S+ RL + G P L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 132
Query: 213 VTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD-VRKT 271
R ++A GAA G+ +LHE+ + IHRD+K+AN+LLDE F A + DFGLA+ + +T
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 272 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXX 331
+ +++ GT ++APE L G+ + ++D++ +G++LLE++TG A+D R
Sbjct: 190 VMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 332 XXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+ +D+ +N + + VE M VA C RP + +V ++L+
Sbjct: 249 EIEDEEKTIEDY---IDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 166/298 (55%), Gaps = 20/298 (6%)
Query: 102 YSWRELQLATDNFSEK------NVLGQGGFGKVYRGVLADGTKVAVKRLT---DFESPGG 152
+S+ EL+ T+NF E+ N +G+GGFG VY+G + + T VAVK+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 153 DAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDW 212
F +E+++++ H NL+ L+GF + + LVY +M N S+ RL + G P L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 132
Query: 213 VTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD-VRKT 271
R ++A GAA G+ +LHE+ + IHRD+K+AN+LLDE F A + DFGLA+ + +T
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 272 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXX 331
+ ++ GT ++APE L G+ + ++D++ +G++LLE++TG A+D R
Sbjct: 190 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 332 XXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+ +D+ +N + + VE M VA C RP + +V ++L+
Sbjct: 249 EIEDEEKTIEDY---IDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 164/298 (55%), Gaps = 20/298 (6%)
Query: 102 YSWRELQLATDNFSEK------NVLGQGGFGKVYRGVLADGTKVAVKRLT---DFESPGG 152
+S+ EL+ T+NF E+ N +G+GGFG VY+G + + T VAVK+L D +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 153 DAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDW 212
F +E+++++ H NL+ L+GF + + LVY +M N S+ RL + G P L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 126
Query: 213 VTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
R ++A GAA G+ +LHE+ + IHRD+K+AN+LLDE F A + DFGLA+ +
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 273 V-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXX 331
V ++ GT ++APE L G+ + ++D++ +G++LLE++TG A+D R
Sbjct: 184 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 242
Query: 332 XXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+ +D+ +N + + VE M VA C RP + +V ++L+
Sbjct: 243 EIEDEEKTIEDY---IDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 20/298 (6%)
Query: 102 YSWRELQLATDNFSEK------NVLGQGGFGKVYRGVLADGTKVAVKRLT---DFESPGG 152
+S+ EL+ T+NF E+ N G+GGFG VY+G + + T VAVK+L D +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 153 DAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDW 212
F +E+++ + H NL+ L+GF + + LVY + N S+ RL + G P L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPLSW 123
Query: 213 VTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
R ++A GAA G+ +LHE+ + IHRD+K+AN+LLDE F A + DFGLA+ +
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 273 V-TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXX 331
V +++ GT + APE L G+ + ++D++ +G++LLE++TG A+D R
Sbjct: 181 VXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 239
Query: 332 XXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+ +D+ N + + VE VA C RP + +V ++L+
Sbjct: 240 EIEDEEKTIEDY---IDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT--DFESPGGDAAFQREVEMISVAVHRN 170
N EK +G G FG V+R G+ VAVK L DF + + F REV ++ H N
Sbjct: 40 NIKEK--IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPN 95
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++ +G T P +V ++ S+ YRL LD R +A A+G+ YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 231 EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS 290
NP I+HRD+K+ N+L+D+ + V DFGL++L + GT +APE L
Sbjct: 155 NR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 291 TGKSSERTDVFGYGIMLLELVTGQRA 316
S+E++DV+ +G++L EL T Q+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT--DFESPGGDAAFQREVEMISVAVHRN 170
N EK +G G FG V+R G+ VAVK L DF + + F REV ++ H N
Sbjct: 40 NIKEK--IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPN 95
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++ +G T P +V ++ S+ YRL LD R +A A+G+ YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 231 EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS 290
NP I+HR++K+ N+L+D+ + V DFGL++L + GT +APE L
Sbjct: 155 NR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 291 TGKSSERTDVFGYGIMLLELVTGQRA 316
S+E++DV+ +G++L EL T Q+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG VY+G V + +T +P AF+ EV ++ H N+L +G+ T
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
P + +V + + S+ + L I E + + +A A+G++YLH IIH
Sbjct: 75 AP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVD-VRKTNVTTQVRGTMGHIAPEYL---STGKSS 295
RD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 296 ERTDVFGYGIMLLELVTGQ 314
++DV+ +GI+L EL+TGQ
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG VY+G V + +T +P AF+ EV ++ H N+L +G+ T
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
P + +V + + S+ + L I E + + +A A+G++YLH IIH
Sbjct: 77 KP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 129
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYL---STGKSS 295
RD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 296 ERTDVFGYGIMLLELVTGQ 314
++DV+ +GI+L EL+TGQ
Sbjct: 190 FQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG VY+G V + +T +P AF+ EV ++ H N+L +G+ T
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
P + +V + + S+ + L I E + + +A A+G++YLH IIH
Sbjct: 75 KP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVD-VRKTNVTTQVRGTMGHIAPEYL---STGKSS 295
RD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 296 ERTDVFGYGIMLLELVTGQ 314
++DV+ +GI+L EL+TGQ
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L I E + + +A A+G++YLH II
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVD-VRKTNVTTQVRGTMGHIAPEYL---STGKS 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L I E + + +A A+G++YLH II
Sbjct: 101 TKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYL---STGKS 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 214 SFQSDVYAFGIVLYELMTGQ 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG VY+G V + +T +P AF+ EV ++ H N+L +G+ T
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
P + +V + + S+ + L I E + + +A A+G++YLH IIH
Sbjct: 80 KP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVD-VRKTNVTTQVRGTMGHIAPEYL---STGKSS 295
RD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 296 ERTDVFGYGIMLLELVTGQ 314
++DV+ +GI+L EL+TGQ
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L I E + + +A A+G++YLH II
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYL---STGKS 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L E + +A ARG++YLH II
Sbjct: 78 TKP-QLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGKS--- 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 191 SFQSDVYAFGIVLYELMTGQ 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 39/294 (13%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAA------FQREVE 161
LA + + +G+GGFG V++G ++ D + VA+K L +S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
++S H N+++L G P +V F+ + +RL + P+ W + R+ L
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRL--LDKAHPI-KWSVKLRLMLD 130
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVL---LDEDFE--AVVGDFGLAKLVDVRKTNVTTQ 276
A G+EY+ NP I+HRD+++ N+ LDE+ A V DFGL++ + + +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 277 VRGTMGHIAPEYLSTGKSS--ERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXX 334
+ G +APE + + S E+ D + + ++L ++TG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---------------E 230
Query: 335 XXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 388
+ K ++ I + L + V LC P+ RP S +V+ L
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG VY+G V + +T +P AF+ EV ++ H N+L +G+ T
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
P + +V + + S+ + L I E + + +A A+G++YLH IIH
Sbjct: 75 KP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 240 RDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGTMGHIAPEYL---STGKSS 295
RD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 296 ERTDVFGYGIMLLELVTGQ 314
++DV+ +GI+L EL+TGQ
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L I E + + +A A+G++YLH II
Sbjct: 94 TKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGTMGHIAPEYL---STGKS 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 207 SFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L I E + + +A A+G++YLH II
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGTMGHIAPEYL---STGKS 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L E + +A ARG++YLH II
Sbjct: 90 TAP-QLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS--- 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G G FG VY+G VAVK L +P AF+ EV ++ H N+L +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T P + +V + + S+ + L E + +A ARG++YLH II
Sbjct: 90 TKP-QLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS--- 294
HRD+K+ N+ L ED +GDFGLA + ++ Q+ G++ +APE + S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 295 SERTDVFGYGIMLLELVTGQ 314
S ++DV+ +GI+L EL+TGQ
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 80 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 194 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 232
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 193 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 231
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 88 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 141
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 202 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 240
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 193 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 231
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 81 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 134
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 195 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 233
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 199 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 237
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 199 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 237
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 87 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 140
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 201 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 239
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 193 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 231
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 84 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 137
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 198 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 236
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 237 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 146
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 89 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 142
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 203 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 241
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 242 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAA------FQREVE 161
LA + + +G+GGFG V++G ++ D + VA+K L +S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
++S H N+++L G P +V F+ + +RL + P+ W + R+ L
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRL--LDKAHPI-KWSVKLRLMLD 130
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVL---LDEDFE--AVVGDFGLAKLVDVRKTNVTTQ 276
A G+EY+ NP I+HRD+++ N+ LDE+ A V DFG ++ + + +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 277 VRGTMGHIAPEYLSTGKSS--ERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXX 334
+ G +APE + + S E+ D + + ++L ++TG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---------------E 230
Query: 335 XXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 388
+ K ++ I + L + V LC P+ RP S +V+ L
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAA------FQREVE 161
LA + + +G+GGFG V++G ++ D + VA+K L +S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
++S H N+++L G P +V F+ + +RL + P+ W + R+ L
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRL--LDKAHPI-KWSVKLRLMLD 130
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVL---LDEDFE--AVVGDFGLAKLVDVRKTNVTTQ 276
A G+EY+ NP I+HRD+++ N+ LDE+ A V DF L++ + + +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 277 VRGTMGHIAPEYLSTGKSS--ERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXX 334
+ G +APE + + S E+ D + + ++L ++TG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---------------E 230
Query: 335 XXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 388
+ K ++ I + L + V LC P+ RP S +V+ L
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 146
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 142
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 144
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 145
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 147
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 147
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 74 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 188 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 226
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 227 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 139
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 72
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 130
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 131 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 187
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 222
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 223 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 191
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 226
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 67
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E ++ V +A + +
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAM 125
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 182
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 221
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 222 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 165
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 129
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 221
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 166
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
YL + K +HRD+ A N +LDE F V DFGLA+ + D +V T + + +
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 129
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 221
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 222 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 39/276 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG V+ G + KVA+K + E + F E E++ H L++L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 180 TPTERLLVYPFMQNLSVAYRLRE---IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
LV+ FM++ ++ LR + E +L + L G+ YL E C
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC--- 126
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
+IHRD+ A N L+ E+ V DFG+ + V + +T + + +PE S + S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 297 RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYN 356
++DV+ +G+++ E V + I + E R ++ V +++ +
Sbjct: 187 KSDVWSFGVLMWE-VFSEGKIPY--------------------ENRSNSEVVEDISTGFR 225
Query: 357 IQE----VETMIQVALLCTQASPEDRPAMSEVVRML 388
+ + + Q+ C + PEDRPA S ++R L
Sbjct: 226 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 226
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 68
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E ++ V +A + +
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAM 126
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 183
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 222
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 223 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 79
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E ++ V +A + +
Sbjct: 80 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAM 137
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 138 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 194
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 233
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 234 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 75
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 133
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 134 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 225
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 226 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 39/276 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG V+ G + KVA+K + E + F E E++ H L++L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 180 TPTERLLVYPFMQNLSVAYRLRE---IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
LV+ FM++ ++ LR + E +L + L G+ YL E C
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC--- 121
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
+IHRD+ A N L+ E+ V DFG+ + V + +T + + +PE S + S
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 297 RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYN 356
++DV+ +G+++ E V + I + E R ++ V +++ +
Sbjct: 182 KSDVWSFGVLMWE-VFSEGKIPY--------------------ENRSNSEVVEDISTGFR 220
Query: 357 IQE----VETMIQVALLCTQASPEDRPAMSEVVRML 388
+ + + Q+ C + PEDRPA S ++R L
Sbjct: 221 LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 226
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG V+ G + KVA+K + E + F E E++ H L++L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
LV+ FM++ ++ LR + + T + L G+ YL E C +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD+ A N L+ E+ V DFG+ + V + +T + + +PE S + S ++D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +G+++ E V + I + E R ++ V +++ + + +
Sbjct: 187 VWSFGVLMWE-VFSEGKIPY--------------------ENRSNSEVVEDISTGFRLYK 225
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRML 388
+ Q+ C + PEDRPA S ++R L
Sbjct: 226 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 68
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E ++ V +A + +
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAM 126
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 222
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 223 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG V+ G + KVA+K + E + F E E++ H L++L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK--EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
LV+ FM++ ++ LR + + T + L G+ YL E C +IH
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD+ A N L+ E+ V DFG+ + V + +T + + +PE S + S ++D
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +G+++ E V + I + E R ++ V +++ + + +
Sbjct: 207 VWSFGVLMWE-VFSEGKIPY--------------------ENRSNSEVVEDISTGFRLYK 245
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRML 388
+ Q+ C + PEDRPA S ++R L
Sbjct: 246 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 131
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 223
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 224 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 226
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G FG+VY GV + VAVK L E F +E ++
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 64
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E + V +A + +
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAM 122
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 179
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ--------------------- 218
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 219 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 66
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E + V +A + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAM 124
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 220
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 221 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 66
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E + V +A + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAM 124
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 220
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 221 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 148
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNV--TTQVRGTMGHI 284
+L + K +HRD+ A N +LDE F V DFGLA+ ++D +V T + + +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 66
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E + V +A + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAM 124
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 220
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 221 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 66
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E + V +A + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAM 124
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------- 220
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 221 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E + V +A + +EYL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEK 134
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 226
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 227 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMISVAVHRNLLRLIGF 177
LG G FG+V+ G + TKVAVK L PG + AF E ++ H L+RL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL----KPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
T ++ +M S+ L+ + G+ +L K + A A G+ Y+
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP----KLIDFSAQIAEGMAYIERK--- 129
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IHRD++AANVL+ E + DFGLA++++ + + + APE ++ G +
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 296 ERTDVFGYGIMLLELVT 312
++DV+ +GI+L E+VT
Sbjct: 190 IKSDVWSFGILLYEIVT 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 75 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
R+++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 189 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 227
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 228 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 33/231 (14%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAA-----FQREVE 161
L++ + + ++G GGFGKVYR G +VAVK P D + ++E +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAAR--HDPDEDISQTIENVRQEAK 58
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIK-PGEPVLDWVTRKRVAL 220
+ ++ H N++ L G C LV F + + L + P + +++W A+
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AV 112
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA--------VVGDFGLAKLVDVRKTN 272
ARG+ YLH+ IIHRD+K++N+L+ + E + DFGLA R+ +
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWH 167
Query: 273 VTTQVR--GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ---RAID 318
TT++ G +APE + S+ +DV+ YG++L EL+TG+ R ID
Sbjct: 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 148
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQVRGTMGHI 284
+L + K +HRD+ A N +LDE F V DFGLA+ + + + T + + +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 145
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQVRGTMGHI 284
+L + K +HRD+ A N +LDE F V DFGLA+ + + + T + + +
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 33/302 (10%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 147
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQVRGTMGHI 284
+L + K +HRD+ A N +LDE F V DFGLA+ + + + T + + +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
A E L T K + ++DV+ +G++L EL+T R + R
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT--------RGAPPYPDVNTFDITVYLLQGR-- 254
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVE 404
R L Y + + +V L C E RP+ SE+V + E + HV
Sbjct: 255 ----RLLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 307
Query: 405 VT 406
T
Sbjct: 308 AT 309
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 16/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 152
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQVRGTMGHI 284
+L + K +HRD+ A N +LDE F V DFGLA+ + + + T + + +
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
A E L T K + ++DV+ +G++L EL+T
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT ++ FM ++ LRE E + V +A + +EYL +
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEK 127
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 128 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
K S ++DV+ +G++L E+ T ID S+ V
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-------------------------V 219
Query: 348 DRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 220 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 119 VLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
V+G+G FG VY G D + A+K L+ AF RE ++ H N+L L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 175 IGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
IG P E L ++ P+M + + +R + V D ++ L ARG+EYL E
Sbjct: 88 IGI-MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS---FGLQVARGMEYLAEQ 143
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ---VRGTMGHIAPEYL 289
K +HRD+ A N +LDE F V DFGLA+ + R+ Q R + A E L
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 290 STGKSSERTDVFGYGIMLLELVT 312
T + + ++DV+ +G++L EL+T
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMISVAVHRNLLRLIGF 177
LG G FG+V+ G + TKVAVK L PG + AF E ++ H L+RL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL----KPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
T ++ FM S+ L+ + G+ +L K + A A G+ Y+
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP----KLIDFSAQIAEGMAYIERK--- 128
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IHRD++AANVL+ E + DFGLA++++ + + + APE ++ G +
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 296 ERTDVFGYGIMLLELVT 312
+++V+ +GI+L E+VT
Sbjct: 189 IKSNVWSFGILLYEIVT 205
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 33/302 (10%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 147
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQVRGTMGHI 284
+L + K +HRD+ A N +LDE F V DFGLA+ + + + T + + +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
A E L T K + ++DV+ +G++L EL+T R + R
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT--------RGAPPYPDVNTFDITVYLLQGR-- 254
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVE 404
R L Y + + +V L C E RP+ SE+V + E + HV
Sbjct: 255 ----RLLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 307
Query: 405 VT 406
T
Sbjct: 308 AT 309
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 39/276 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG V+ G + KVA+K + E + F E E++ H L++L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 180 TPTERLLVYPFMQNLSVAYRLRE---IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
LV FM++ ++ LR + E +L + L G+ YL E C
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC--- 124
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
+IHRD+ A N L+ E+ V DFG+ + V + +T + + +PE S + S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 297 RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYN 356
++DV+ +G+++ E V + I + E R ++ V +++ +
Sbjct: 185 KSDVWSFGVLMWE-VFSEGKIPY--------------------ENRSNSEVVEDISTGFR 223
Query: 357 IQE----VETMIQVALLCTQASPEDRPAMSEVVRML 388
+ + + Q+ C + PEDRPA S ++R L
Sbjct: 224 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 33/302 (10%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL--ADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVH 168
+F+E V+G+G FG VY G L DG K+ AVK L G + F E ++ H
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 169 RNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N+L L+G C + L+V P+M++ + +R V D + L A+G++
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMK 206
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQVRGTMGHI 284
+L + K +HRD+ A N +LDE F V DFGLA+ + + + T + + +
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
A E L T K + ++DV+ +G++L EL+T R + R
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMT--------RGAPPYPDVNTFDITVYLLQGR-- 313
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVE 404
R L Y + + +V L C E RP+ SE+V + E + HV
Sbjct: 314 ----RLLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 366
Query: 405 VT 406
T
Sbjct: 367 AT 368
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 119 VLGQGGFGKVYRGV-LADG----TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
VLG G FG VY+G+ + +G VA+K L + P + F E +++ H +L+R
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 174 LIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
L+G C +PT +L+ + P L + ++ + +L+W + A+G+ YL E
Sbjct: 82 LLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYL 289
+++HRD+ A NVL+ + DFGLA+L+ D ++ N + + +A E +
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG-KMPIKWMALECI 191
Query: 290 STGKSSERTDVFGYGIMLLELVT 312
K + ++DV+ YG+ + EL+T
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ + + K+ LG G +G+VY GV + VAVK L E F +E ++
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEI 64
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H NL++L+G CT ++ FM ++ LRE E + V +A + +
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAM 122
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
EYL + IHRD+ A N L+ E+ V DFGL++L+ + + AP
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAP 179
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
E L+ K S ++DV+ +G++L E+ T ID S+
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ--------------------- 218
Query: 343 LDAIVDRNLNKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
V L K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 219 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 33/274 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G G+V+ G TKVAVK L + AF E ++ H+ L+RL T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK--QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
++ +M+N S+ L+ P L +A A G+ ++ E IH
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD++AAN+L+ + + DFGLA+L++ + + + APE ++ G + ++D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 300 VFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQE 359
V+ +GI+L E+VT R I + + V +NL + Y +
Sbjct: 193 VWSFGILLTEIVTHGR-IPYPGMT--------------------NPEVIQNLERGYRMVR 231
Query: 360 ----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
E + Q+ LC + PEDRP + +LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 118 NVLGQGGFGKVYRGV-LADG----TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
VLG G FG VY+G+ + +G VA+K L + P + F E +++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 173 RLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
RL+G C +PT +L+ + P L + ++ + +L+W + A+G+ YL
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 157
Query: 231 EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEY 288
E +++HRD+ A NVL+ + DFGLA+L+ D ++ N + + +A E
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG-KMPIKWMALEC 213
Query: 289 LSTGKSSERTDVFGYGIMLLELVT 312
+ K + ++DV+ YG+ + EL+T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 16/196 (8%)
Query: 120 LGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G FG+V+ G L AD T VAVK + P A F +E ++ H N++RLIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T++ +Y M+ + L ++ L T ++ AA G+EYL C I
Sbjct: 182 ---TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI-----APEYLSTGK 293
HRD+ A N L+ E + DFG+++ + + G + + APE L+ G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 294 SSERTDVFGYGIMLLE 309
S +DV+ +GI+L E
Sbjct: 292 YSSESDVWSFGILLWE 307
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 115 SEKNVLGQGGFGKVYRGVL--ADGTK---VAVKRLTDFESPGGDAAFQREVEMISVAVHR 169
+ + V+G G FG+VY+G+L + G K VA+K L + F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGE-PVLDWVTRKRVALGAARGLEY 228
N++RL G + +++ +M+N ++ LRE K GE VL V R G A G++Y
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAP 286
L N +HRD+ A N+L++ + V DFGL++++ D T T+ + + AP
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
E +S K + +DV+ +GI++ E++T G+R
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 39/276 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG V+ G + KVA+K + E + F E E++ H L++L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 180 TPTERLLVYPFMQNLSVAYRLRE---IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
LV+ FM++ ++ LR + E +L + L G+ YL E
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEE---AS 123
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
+IHRD+ A N L+ E+ V DFG+ + V + +T + + +PE S + S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 297 RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYN 356
++DV+ +G+++ E V + I + E R ++ V +++ +
Sbjct: 184 KSDVWSFGVLMWE-VFSEGKIPY--------------------ENRSNSEVVEDISTGFR 222
Query: 357 IQE----VETMIQVALLCTQASPEDRPAMSEVVRML 388
+ + + Q+ C + PEDRPA S ++R L
Sbjct: 223 LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 41/282 (14%)
Query: 117 KNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLI 175
K+ LG G +G+VY GV + VAVK L E F +E ++ H NL++L+
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK--- 334
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IHR++ A N L+ E+ V DFGL++L+ + + APE L+ K S
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 296 ERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNL 351
++DV+ +G++L E+ T ID S+ V L
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------VYELL 429
Query: 352 NKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 430 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 16/196 (8%)
Query: 120 LGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G FG+V+ G L AD T VAVK + P A F +E ++ H N++RLIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
T++ +Y M+ + L ++ L T ++ AA G+EYL C I
Sbjct: 182 ---TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI-----APEYLSTGK 293
HRD+ A N L+ E + DFG+++ + + G + + APE L+ G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 294 SSERTDVFGYGIMLLE 309
S +DV+ +GI+L E
Sbjct: 292 YSSESDVWSFGILLWE 307
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 22/285 (7%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D++ + V+G G V A KVA+KR+ + +E++ +S H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEP---VLDWVTRKRVALGAARGL 226
++ E LV + SV ++ I GE VLD T + GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVRKTNVTTQVRGTMG 282
EYLH++ IHRDVKA N+LL ED + DFG++ + D+ + V GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 283 HIAPEYLSTGKSSE-RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREK 341
+APE + + + + D++ +GI +EL TG A + + E
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 342 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 386
+ D+ + K Y + MI LC Q PE RP +E++R
Sbjct: 250 ---GVQDKEMLKKYG-KSFRKMIS---LCLQKDPEKRPTAAELLR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 22/285 (7%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D++ + V+G G V A KVA+KR+ + +E++ +S H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEP---VLDWVTRKRVALGAARGL 226
++ E LV + SV ++ I GE VLD T + GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVRKTNVTTQVRGTMG 282
EYLH++ IHRDVKA N+LL ED + DFG++ + D+ + V GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 283 HIAPEYLSTGKSSE-RTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREK 341
+APE + + + + D++ +GI +EL TG A + + E
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQNDPPSLE- 243
Query: 342 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 386
+ D+ + K Y + MI LC Q PE RP +E++R
Sbjct: 244 --TGVQDKEMLKKYG-KSFRKMIS---LCLQKDPEKRPTAAELLR 282
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 41/282 (14%)
Query: 117 KNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLI 175
K+ LG G +G+VY GV + VAVK L E F +E ++ H NL++L+
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
G CT ++ FM ++ LRE E ++ V +A + +EYL +
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK--- 376
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IHR++ A N L+ E+ V DFGL++L+ + + APE L+ K S
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 296 ERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNL 351
++DV+ +G++L E+ T ID S+ V L
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------VYELL 471
Query: 352 NKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 472 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 117 KNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLI 175
K+ LG G +G+VY GV + VAVK L E F +E ++ H NL++L+
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
G CT ++ FM ++ LRE E + V +A + +EYL +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK--- 337
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IHR++ A N L+ E+ V DFGL++L+ + + APE L+ K S
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 296 ERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNL 351
++DV+ +G++L E+ T ID S+ V L
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------VYELL 432
Query: 352 NKNYNIQE----VETMIQVALLCTQASPEDRPAMSEVVRMLE 389
K+Y ++ E + ++ C Q +P DRP+ +E+ + E
Sbjct: 433 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G G FG VY+G V + ++ D +P AF+ EV ++ H N+L +G+ T
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
+ L + S Y+ ++ E +A A+G++YLH IIH
Sbjct: 103 K--DNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIH 155
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYL---STGKSS 295
RD+K+ N+ L E +GDFGLA + + Q G++ +APE + S
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 296 ERTDVFGYGIMLLELVTGQ 314
++DV+ YGI+L EL+TG+
Sbjct: 216 FQSDVYSYGIVLYELMTGE 234
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 129/296 (43%), Gaps = 41/296 (13%)
Query: 97 GQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF 156
G L ++E+++ + V+G+G FG V + VA+K++ ES AF
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKW-RAKDVAIKQI---ESESERKAF 49
Query: 157 QREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK 216
E+ +S H N+++L G C P LV + + S+ L +P L + T
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEP----LPYYTAA 103
Query: 217 RV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTN 272
L ++G+ YLH +IHRD+K N+LL + + DFG A + TN
Sbjct: 104 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN 163
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXX 332
+G+ +APE SE+ DVF +GI+L E++T ++ D
Sbjct: 164 N----KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD------EIGGPAFR 213
Query: 333 XXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 388
R I +NL K +E+++ C P RP+M E+V+++
Sbjct: 214 IMWAVHNGTRPPLI--KNLPK-----PIESLMT---RCWSKDPSQRPSMEEIVKIM 259
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 26/236 (11%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDF 147
+F Y E ++A + + LGQG FG VY GV A G T+VA+K + +
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEA 60
Query: 148 ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP-- 205
S F E ++ +++RL+G + L++ M + LR ++P
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 206 -GEPVLDWVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
PVL + ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 262 LAKLVDVRKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + D+ +T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 178 MTR--DIXETDXXR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 125/299 (41%), Gaps = 51/299 (17%)
Query: 120 LGQGGFGKVYR----GVLA--DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
+G+G FG+V++ G+L T VAVK L + S A FQRE +++ + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 174 LIGFCTTPTERLLVYPFM--------------------QNLSVAYRLREIKPGEPVLDWV 213
L+G C L++ +M + ++ R R PG P L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 214 TRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRK 270
+ +A A G+ YL E K +HRD+ N L+ E+ + DFGL++ + D K
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXX 330
+ + + + PE + + + +DV+ YG++L E+ FS
Sbjct: 232 ADGNDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEI--------FSYGLQPYYGMA 281
Query: 331 XXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
R+ + A + + YN+ LC P DRP+ + R+L+
Sbjct: 282 HEEVIYYVRDGNILACPENCPLELYNLMR---------LCWSKLPADRPSFCSIHRILQ 331
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------ 125
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------ 126
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+ + K+ LG G +G+VY GV + VAVK L E F +E ++ H NL
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
++L+G CT +V +M ++ LRE E + V +A + +EYL +
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE--VTAVVLLYMATQISSAMEYLEK 148
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 149 K---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 205
Query: 292 GKSSERTDVFGYGIMLLELVT----GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIV 347
S ++DV+ +G++L E+ T ID S+ V
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------------------V 240
Query: 348 DRNLNKNYNIQEVE----TMIQVALLCTQASPEDRPAMSEVVRMLE 389
L K Y +++ E + ++ C + SP DRP+ +E + E
Sbjct: 241 YDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 45/316 (14%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDF 147
+F Y E ++A + + LGQG FG VY GV A G T+VA+K + +
Sbjct: 2 SFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEA 60
Query: 148 ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP-- 205
S F E ++ +++RL+G + L++ M + LR ++P
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 206 -GEPVLDWVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
PVL + ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 262 LAKLVDVRKTNVTTQVRGTMG-----HIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 316
+ + D+ +T+ +G G ++PE L G + +DV+ +G++L E+ T
Sbjct: 178 MTR--DIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---- 229
Query: 317 IDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRN-LNKNYNIQEVETMIQVALLCTQASP 375
E+ L +++ L+K N ++ + ++ +C Q +P
Sbjct: 230 ------------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNP 275
Query: 376 EDRPAMSEVVRMLEGE 391
+ RP+ E++ ++ E
Sbjct: 276 KMRPSFLEIISSIKEE 291
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 125
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 28/273 (10%)
Query: 117 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIG 176
+ V+G+G FG V + VA+K++ ES AF E+ +S H N+++L G
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQI---ESESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
C P LV + + S+ L +P P L ++G+ YLH
Sbjct: 69 ACLNPV--CLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 237 IIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+IHRD+K N+LL + + DFG A + TN +G+ +APE S
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN----KGSAAWMAPEVFEGSNYS 181
Query: 296 ERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNY 355
E+ DVF +GI+L E++T ++ D R I +NL K
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFD------EIGGPAFRIMWAVHNGTRPPLI--KNLPK-- 231
Query: 356 NIQEVETMIQVALLCTQASPEDRPAMSEVVRML 388
+E+++ C P RP+M E+V+++
Sbjct: 232 ---PIESLMT---RCWSKDPSQRPSMEEIVKIM 258
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 135
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 136 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 45/305 (14%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFESPGGDAAFQR 158
E ++A + + LGQG FG VY GV A G T+VA+K + + S F
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 159 EVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP---GEPVLDWVTR 215
E ++ +++RL+G + L++ M + LR ++P PVL +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 216 KRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+ + D+ +T+
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETD 177
Query: 273 VTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXX 327
+G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 178 XXR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 220
Query: 328 XXXXXXXXXXXREKRLDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 386
E+ L +++ L+K N ++ ++++ +C Q +P+ RP+ E++
Sbjct: 221 -LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFLEIIS 277
Query: 387 MLEGE 391
++ E
Sbjct: 278 SIKEE 282
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 119
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 120 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 128
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 127
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 125
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 126
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 125
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 128
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 128
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 129
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 127
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 128
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 132
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 131
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 132 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 26/235 (11%)
Query: 96 FGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFE 148
F Y E ++A + + LGQG FG VY GV A G T+VA+K + +
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAA 67
Query: 149 SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPG-- 206
S F E ++ +++RL+G + L++ M + LR ++P
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 127
Query: 207 -EPVLDWVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
PVL + ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 263 AKLVDVRKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
+ D+ +T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 185 TR--DIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 142/315 (45%), Gaps = 45/315 (14%)
Query: 96 FGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFE 148
F Y E ++A + + LGQG FG VY GV A G T+VA+K + +
Sbjct: 31 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAA 89
Query: 149 SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP--- 205
S F E ++ +++RL+G + L++ M + LR ++P
Sbjct: 90 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 149
Query: 206 GEPVLDWVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
PVL + ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+
Sbjct: 150 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 206
Query: 263 AKLVDVRKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
+ D+ +T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 207 TR--DIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----- 257
Query: 318 DFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPE 376
E+ L +++ L+K N ++ + ++ +C Q +P+
Sbjct: 258 -----------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPK 304
Query: 377 DRPAMSEVVRMLEGE 391
RP+ E++ ++ E
Sbjct: 305 MRPSFLEIISSIKEE 319
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 150
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 151 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 141/309 (45%), Gaps = 45/309 (14%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFESPGGDA 154
Y E ++A + + LGQG FG VY GV A G T+VA+K + + S
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 155 AFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPG---EPVLD 211
F E ++ +++RL+G + L++ M + LR ++P PVL
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 212 WVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 268
+ ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+ + D+
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DI 178
Query: 269 RKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXX 323
+T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 179 YETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 225
Query: 324 XXXXXXXXXXXXXXXREKRLDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMS 382
E+ L +++ L+K N ++ + ++ +C Q +P+ RP+
Sbjct: 226 -----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFL 278
Query: 383 EVVRMLEGE 391
E++ ++ E
Sbjct: 279 EIISSIKEE 287
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 26/235 (11%)
Query: 96 FGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFE 148
F Y E ++A + + LGQG FG VY GV A G T+VA+K + +
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAA 67
Query: 149 SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP--- 205
S F E ++ +++RL+G + L++ M + LR ++P
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 127
Query: 206 GEPVLDWVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
PVL + ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 263 AKLVDVRKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
+ D+ +T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 185 TR--DIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 26/229 (11%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFESPGGDA 154
Y E ++A + + LGQG FG VY GV A G T+VA+K + + S
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 155 AFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP---GEPVLD 211
F E ++ +++RL+G + L++ M + LR ++P PVL
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 212 WVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 268
+ ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+ + D+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DI 181
Query: 269 RKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
+T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 182 YETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 26/229 (11%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFESPGGDA 154
Y E ++A + + LGQG FG VY GV A G T+VA+K + + S
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 155 AFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP---GEPVLD 211
F E ++ +++RL+G + L++ M + LR ++P PVL
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 212 WVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 268
+ ++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+ + D+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DI 181
Query: 269 RKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
+T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 182 YETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 26/225 (11%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFESPGGDAAFQR 158
E ++A + + LGQG FG VY GV A G T+VA+K + + S F
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 159 EVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP---GEPVLDWVTR 215
E ++ +++RL+G + L++ M + LR ++P PVL +
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 216 KRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+ + D+ +T+
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD 183
Query: 273 VTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
+G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 184 YYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 122
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 123 IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 45/305 (14%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFESPGGDAAFQR 158
E ++A + + LGQG FG VY GV A G T+VA+K + + S F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 159 EVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP---GEPVLDWVTR 215
E ++ +++RL+G + L++ M + LR ++P PVL +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 216 KRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
++ A A G+ YL+ + K +HRD+ A N ++ EDF +GDFG+ + D+ +T+
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETD 179
Query: 273 VTTQVRGTMG-----HIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXX 327
+G G ++PE L G + +DV+ +G++L E+ T
Sbjct: 180 YYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 222
Query: 328 XXXXXXXXXXXREKRLDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 386
E+ L +++ L+K N ++ + ++ +C Q +P+ RP+ E++
Sbjct: 223 -LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LFELMRMCWQYNPKMRPSFLEIIS 279
Query: 387 MLEGE 391
++ E
Sbjct: 280 SIKEE 284
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 80
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLRE-------IKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + RE P
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPS 140
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 141/309 (45%), Gaps = 45/309 (14%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADG-------TKVAVKRLTDFESPGGDA 154
Y E ++A + + LGQG FG VY GV A G T+VA+K + + S
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 155 AFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP---GEPVLD 211
F E ++ +++RL+G + L++ M + LR ++P PVL
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 212 WVTRKRVALGA---ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 268
+ ++ A A G+ YL+ + K +HRD+ A N + EDF +GDFG+ + D+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR--DI 175
Query: 269 RKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXX 323
+T+ +G G + +PE L G + +DV+ +G++L E+ T
Sbjct: 176 YETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 222
Query: 324 XXXXXXXXXXXXXXXREKRLDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMS 382
E+ L +++ L+K N ++ ++++ +C Q +P+ RP+
Sbjct: 223 -----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFL 275
Query: 383 EVVRMLEGE 391
E++ ++ E
Sbjct: 276 EIISSIKEE 284
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y M+ +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVMEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH 168
++ F + LG G + VY+G+ G VA+K + G + RE+ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPV-LDWVTRKRVALGAARGLE 227
N++RL T + LV+ FM N Y P L+ K +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ HE+ KI+HRD+K N+L+++ + +GDFGLA+ + +++V T+ + AP+
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPD 178
Query: 288 YLSTGKS-SERTDVFGYGIMLLELVTGQ 314
L ++ S D++ G +L E++TG+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VL G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 125
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 80
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLR-------EIKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPS 140
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 198 RDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+ L + SP + E ++
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 159
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VL G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 132
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VL G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 132
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFGLAKL+ + + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HRD+ A N ++ DF +GDFG+ + D+ +T+ +G G +
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR--KGGKGLLPVR 194
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 238
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P+ RP E+V +L+ +
Sbjct: 239 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 129
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFG AKL+ + + +
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 127
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFG AKL+ + + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 127
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFG AKL+ + + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HRD+ A N ++ DF +GDFG+ + D+ +T+ +G G +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR--KGGKGLLPVR 197
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 241
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P+ RP E+V +L+ +
Sbjct: 242 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 125
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFG AKL+ + + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 127
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFG AKL+ + + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y ++ +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 72
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLR-------EIKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 73 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 132
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 133 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 190 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKV----AVKRLTDFESPGGDAAFQREVEMI 163
L F + VLG G FG VY+G+ + +G KV A+K L + SP + E ++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 164 SVAVHRNLLRLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + ++ RL+G C T T +L+ + PF L ++ + +L+W +
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------ 132
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGT 280
A+G+ YL + +++HRD+ A NVL+ + DFG AKL+ + + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+ +A E + + ++DV+ YG+ + EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 69
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLR-------EIKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 70 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 129
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 130 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 187 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 73
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLR-------EIKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 74 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 133
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 134 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 191 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HRD+ A N ++ DF +GDFG+ + D+ +T+ +G G +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR--KGGKGLLPVR 197
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 241
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P RP E+V +L+ +
Sbjct: 242 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 80
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLR-------EIKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 140
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 65
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLRE-------IKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 66 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 125
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y ++ +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVIEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HRD+ A N ++ DF +GDFG+ + D+ +T+ +G G +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR--KGGKGLLPVR 197
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 241
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P+ RP E+V +L+ +
Sbjct: 242 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 80
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLRE-------IKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 140
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +Y + +S L +K GE + V + A A G+ Y+ E N
Sbjct: 75 VSEEP----IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYV-ERMN- 127
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 128 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 187 IKSDVWSFGILLTELTTKGR 206
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 73 VSEEP----IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 125
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 126 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 185 IKSDVWSFGILLTELTTKGR 204
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +Y + +S L +K GE + V + A A G+ Y+ E N
Sbjct: 248 VSEEP----IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYV-ERMN- 300
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 301 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 360 IKSDVWSFGILLTELTTKGR 379
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G +G VY+ + G VA+KR+ D E G + RE+ ++ H N++ LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
+ LV+ FM+ + L E K G L K RG+ + H+H +I+
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTG---LQDSQIKIYLYQLLRGVAHCHQH---RIL 141
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL-STGKSSER 297
HRD+K N+L++ D + DFGLA+ + + T +V T+ + AP+ L + K S
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 298 TDVFGYGIMLLELVTGQ 314
D++ G + E++TG+
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G +G VY+ + G VA+KR+ D E G + RE+ ++ H N++ LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
+ LV+ FM+ + L E K G L K RG+ + H+H +I+
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTG---LQDSQIKIYLYQLLRGVAHCHQH---RIL 141
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL-STGKSSER 297
HRD+K N+L++ D + DFGLA+ + + T +V T+ + AP+ L + K S
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 298 TDVFGYGIMLLELVTGQ 314
D++ G + E++TG+
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 118 NVLGQGGFGKVYRGV-LADG----TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
VLG G FG VY+G+ + DG VA+K L + SP + E +++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA---------- 222
RL+G C T T +L+ ++ P +LD V R LG+
Sbjct: 83 RLLGICLTSTVQLVT--------------QLMPYGCLLDHVRENRGRLGSQDLLNWCMQI 128
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ-VRGTM 281
A+G+ YL + +++HRD+ A NVL+ + DFGLA+L+D+ +T + +
Sbjct: 129 AKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPI 185
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 318
+A E + + + ++DV+ YG+ + EL+T G + D
Sbjct: 186 KWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LG G FG+V+ G TKVA+K L PG +F E +++ H L++L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL----KPGTMSPESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEP-VLDWVTRKRVALGAARGLEYLHEHCNPK 236
+ +Y + ++ L +K GE L +A A G+ Y+ E N
Sbjct: 73 VSEEP----IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMN-- 125
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
IHRD+++AN+L+ + DFGLA+L++ + + + APE G+ +
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 297 RTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L ELVT R
Sbjct: 186 KSDVWSFGILLTELVTKGR 204
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +Y + +S L +K GE + V + A A G+ Y+ E N
Sbjct: 248 VSEEP----IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYV-ERMN- 300
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 301 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 360 IKSDVWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 71 VSEEP----IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 124 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 183 IKSDVWSFGILLTELTTKGR 202
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HRD+ A N ++ DF +GDFG+ + D+ +T+ +G G +
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR--KGGKGLLPVR 196
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 240
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P+ RP E+V +L+ +
Sbjct: 241 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVCEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADG-----------TKVAVKRLTDFESPGGDAAF 156
+L D LG+G FG+V VLA+ TKVAVK L + +
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL 121
Query: 157 QREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLR-------EIKPG 206
E+EM+ + H+N++ L+G CT P ++ Y NL + R P
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ ++ K + A ARG+EYL + K IHRD+ A NVL+ ED + DFGLA
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 264 KLV-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + + TT R + +APE L + ++DV+ +G++L E+ T
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +V +M S+ L+ GE + V + A A G+ Y+ E N
Sbjct: 72 VSE-EPIXIVTEYMSKGSLLDFLK----GETGKYLRLPQLVDMAAQIASGMAYV-ERMN- 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 125 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 184 IKSDVWSFGILLTELTTKGR 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVTEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 57/230 (24%)
Query: 117 KNVLGQGGFGKVYRG-VLADGTKV--AVKRLTDFESPGGDAAFQREVEMIS-VAVHRNLL 172
++V+G+G FG+V + + DG ++ A+KR+ ++ S F E+E++ + H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV-------------- 218
L+G C ++ Y E P +LD++ + RV
Sbjct: 80 NLLGAC-------------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 126
Query: 219 -----------ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 267
A ARG++YL + + IHRD+ A N+L+ E++ A + DFGL++ +
Sbjct: 127 STLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE 183
Query: 268 VRKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
V V+ TMG + A E L+ + +DV+ YG++L E+V+
Sbjct: 184 V-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 33/258 (12%)
Query: 84 VDVAGEVDRRIAFGQLKRYSWR-ELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT- 137
V V G D + + Y + + + +N VLG G FGKV G+ G
Sbjct: 16 VQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVS 75
Query: 138 -KVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQN 193
+VAVK L + A E++M++ + H N++ L+G CT P + Y +
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 194 LSVAYRLREIKPGEPVLDWVTRKRV-----------------ALGAARGLEYLH-EHCNP 235
L R + K E +++ +KR+ A A+G+E+L + C
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC-- 193
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNVTTQVRGTMGHIAPEYLSTGKS 294
+HRD+ A NVL+ + DFGLA+ ++ V R + +APE L G
Sbjct: 194 --VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY 251
Query: 295 SERTDVFGYGIMLLELVT 312
+ ++DV+ YGI+L E+ +
Sbjct: 252 TIKSDVWSYGILLWEIFS 269
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEXSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 57/230 (24%)
Query: 117 KNVLGQGGFGKVYRG-VLADGTKV--AVKRLTDFESPGGDAAFQREVEMI-SVAVHRNLL 172
++V+G+G FG+V + + DG ++ A+KR+ ++ S F E+E++ + H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV-------------- 218
L+G C ++ Y E P +LD++ + RV
Sbjct: 90 NLLGAC-------------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136
Query: 219 -----------ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 267
A ARG++YL + + IHRD+ A N+L+ E++ A + DFGL++ +
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE 193
Query: 268 VRKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
V V+ TMG + A E L+ + +DV+ YG++L E+V+
Sbjct: 194 V-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +V +M S+ L+ GE + V + A A G+ Y+ E N
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLK----GETGKYLRLPQLVDMSAQIASGMAYV-ERMN- 131
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 132 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 191 IKSDVWSFGILLTELTTKGR 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HRD+ A N ++ DF +GDFG+ + D+ +T +G G +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYR--KGGKGLLPVR 197
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 241
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P+ RP E+V +L+ +
Sbjct: 242 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +V +M S+ L+ GE + V + A A G+ Y+ E N
Sbjct: 79 VSE-EPIYIVTEYMNKGSLLDFLK----GETGKYLRLPQLVDMSAQIASGMAYV-ERMN- 131
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 132 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 191 IKSDVWSFGILLTELTTKGR 210
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGLA+++ D T + +
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +Y + +S L +K GE + V + A A G+ Y+ E N
Sbjct: 248 VSEEP----IYIVGEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYV-ERMN- 300
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 301 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 360 IKSDVWSFGILLTELTTKGR 379
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 33/211 (15%)
Query: 118 NVLGQGGFGKVYRGV-LADGTKVAVKRLTD-FESPGGDAAFQREVE-MISVAV--HRNLL 172
VLG G FG V++GV + +G + + E G +FQ + M+++ H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA---------- 222
RL+G C + +L+ + P +LD V + R ALG
Sbjct: 79 RLLGLCPGSSLQLVT--------------QYLPLGSLLDHVRQHRGALGPQLLLNWGVQI 124
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTM 281
A+G+ YL EH ++HR++ A NVLL + V DFG+A L+ K + ++ + +
Sbjct: 125 AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+A E + GK + ++DV+ YG+ + EL+T
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 82 VSEEP----IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD+ AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 135 -YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 128
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 129 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 45/280 (16%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMISVAVHRNLLRLIGF 177
LG G FG+V+ TKVAVK + PG + AF E ++ H L++L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM----KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 178 CTTPTERLLVYPFMQNLSVAYRLRE----IKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
T ++ FM S+ L+ +P ++D+ + A G+ ++ +
Sbjct: 79 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQR- 130
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK 293
IHRD++AAN+L+ + DFGLA++++ + + + APE ++ G
Sbjct: 131 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 294 SSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNK 353
+ ++DV+ +GI+L+E+VT R I + + V R L +
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGR-IPYPGMS--------------------NPEVIRALER 227
Query: 354 NYNIQEVET----MIQVALLCTQASPEDRPAMSEVVRMLE 389
Y + E + + + C + PE+RP + +L+
Sbjct: 228 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 33/211 (15%)
Query: 118 NVLGQGGFGKVYRGV-LADGTKVAVKRLTD-FESPGGDAAFQREVE-MISVAV--HRNLL 172
VLG G FG V++GV + +G + + E G +FQ + M+++ H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA---------- 222
RL+G C + +L+ + P +LD V + R ALG
Sbjct: 97 RLLGLCPGSSLQLVT--------------QYLPLGSLLDHVRQHRGALGPQLLLNWGVQI 142
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTM 281
A+G+ YL EH ++HR++ A NVLL + V DFG+A L+ K + ++ + +
Sbjct: 143 AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+A E + GK + ++DV+ YG+ + EL+T
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 145
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 146 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 89 EVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTD-- 146
E D+ F Q K + L ++FS ++G+GGFG+VY AD K+ + D
Sbjct: 167 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 147 -FESPGGDAAFQREVEMISVAVHRNLLRLIGFC---TTPTERLLVYPFMQNLSVAYRLRE 202
+ G+ E M+S+ + ++ TP + + M + Y L +
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ 285
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
V + A GLE++H N +++RD+K AN+LLDE + D GL
Sbjct: 286 ----HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 338
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT-DVFGYGIMLLELVTGQ 314
A +K + + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 339 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 89 EVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTD-- 146
E D+ F Q K + L ++FS ++G+GGFG+VY AD K+ + D
Sbjct: 167 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 147 -FESPGGDAAFQREVEMISVAVHRNLLRLIGFC---TTPTERLLVYPFMQNLSVAYRLRE 202
+ G+ E M+S+ + ++ TP + + M + Y L +
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ 285
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
V + A GLE++H N +++RD+K AN+LLDE + D GL
Sbjct: 286 ----HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 338
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT-DVFGYGIMLLELVTGQ 314
A +K + + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 339 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 89 EVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTD-- 146
E D+ F Q K + L ++FS ++G+GGFG+VY AD K+ + D
Sbjct: 166 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 224
Query: 147 -FESPGGDAAFQREVEMISVAVHRNLLRLIGFC---TTPTERLLVYPFMQNLSVAYRLRE 202
+ G+ E M+S+ + ++ TP + + M + Y L +
Sbjct: 225 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ 284
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
V + A GLE++H N +++RD+K AN+LLDE + D GL
Sbjct: 285 ----HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 337
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT-DVFGYGIMLLELVTGQ 314
A +K + + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 338 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 387
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 158 SGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 89 EVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTD-- 146
E D+ F Q K + L ++FS ++G+GGFG+VY AD K+ + D
Sbjct: 167 ESDKFTRFCQWKNVELN-IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 147 -FESPGGDAAFQREVEMISVAVHRNLLRLIGFC---TTPTERLLVYPFMQNLSVAYRLRE 202
+ G+ E M+S+ + ++ TP + + M + Y L +
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ 285
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
V + A GLE++H N +++RD+K AN+LLDE + D GL
Sbjct: 286 ----HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 338
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT-DVFGYGIMLLELVTGQ 314
A +K + + GT G++APE L G + + + D F G ML +L+ G
Sbjct: 339 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HR++ A N ++ DF +GDFG+ + D+ +T+ +G G +
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR--KGGKGLLPVR 197
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 241
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P RP E+V +L+ +
Sbjct: 242 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 120 LGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LGQG FG VY G D T+VAVK + + S F E ++ +++R
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP------GEPVLDWVTRKRVALGAARGLE 227
L+G + L+V M + + LR ++P G P ++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
YL+ K +HR++ A N ++ DF +GDFG+ + D+ +T+ +G G +
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR--KGGKGLLPVR 198
Query: 285 --APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE L G + +D++ +G++L E+ + E+
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 242
Query: 343 LDAIVDRN-LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 391
L ++D L++ N E T + +C Q +P RP E+V +L+ +
Sbjct: 243 LKFVMDGGYLDQPDNCPERVT--DLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--ARGLEYLHEHCNP 235
+ +Y + +S L +K GE + V + A A G+ Y+ E N
Sbjct: 331 VSEEP----IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYV-ERMN- 383
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGLA+L++ + + + APE G+ +
Sbjct: 384 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 443 IKSDVWSFGILLTELTTKGR 462
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 119 VLGQGGFGKVYRGVL-ADGTK---VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
V+G G FG+V RG L A G K VA+K L + F E ++ H N++RL
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G T +++ FM+N ++ LR V+ V R G A G+ YL E
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM-- 137
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI-----APEYL 289
+HRD+ A N+L++ + V DFGL++ ++ ++ T+ G I APE +
Sbjct: 138 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTETSSLGGKIPIRWTAPEAI 195
Query: 290 STGKSSERTDVFGYGIMLLELVT-GQR 315
+ K + +D + YGI++ E+++ G+R
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 120 LGQGGFGKVYRG-VLADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+GQG FG+V++ G KVA+K+ L + E G RE++++ + H N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 178 CTT---PTERL-----LVYPF--------MQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
C T P R LV+ F + N+ V + L EIK RV
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 133
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG-- 279
GL Y+H + KI+HRD+KAANVL+ D + DFGLA+ + K + +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 280 -TMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVT 312
T+ + PE L + D++G G ++ E+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 120 LGQGGFGKVYRGVL-ADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+GQG FG+V++ G KVA+K+ L + E G RE++++ + H N++ LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 178 CTT---PTERL-----LVYPF--------MQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
C T P R LV+ F + N+ V + L EIK RV
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 132
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG-- 279
GL Y+H + KI+HRD+KAANVL+ D + DFGLA+ + K + +
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 280 -TMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVT 312
T+ + PE L + D++G G ++ E+ T
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARR-PPGMEYSYDINRV 149
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 119 VLGQGGFGKVYRGVLADGTKVAV-KRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
VLG+G FG+ + + +V V K L F+ F +EV+++ H N+L+ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDE-ETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
+ +++ ++ ++ + P W R A A G+ YLH I
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLHSM---NI 129
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT-------------TQVRGTMGHI 284
IHRD+ + N L+ E+ VV DFGLA+L+ KT V G +
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELV 311
APE ++ E+ DVF +GI+L E++
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 155
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 156 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 120 LGQGGFGKVYRG-VLADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+GQG FG+V++ G KVA+K+ L + E G RE++++ + H N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 178 CTT---PTERL-----LVYPF--------MQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
C T P R LV+ F + N+ V + L EIK RV
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 133
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG-- 279
GL Y+H + KI+HRD+KAANVL+ D + DFGLA+ + K + +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 280 -TMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVT 312
T+ + PE L + D++G G ++ E+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 120 LGQGGFGKVYRGVL-ADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+GQG FG+V++ G KVA+K+ L + E G RE++++ + H N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 178 CTT---PTERL-----LVYPF--------MQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
C T P R LV+ F + N+ V + L EIK RV
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 133
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG-- 279
GL Y+H + KI+HRD+KAANVL+ D + DFGLA+ + K + +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 280 -TMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVT 312
T+ + PE L + D++G G ++ E+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 136
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 141
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 119 VLGQGGFGKVYRGVL-ADGTK---VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
V+G G FG+V RG L A G K VA+K L + F E ++ H N++RL
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G T +++ FM+N ++ LR V+ V R G A G+ YL E
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM-- 135
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT-TQVRGTMGHI---APEYLS 290
+HRD+ A N+L++ + V DFGL++ ++ ++ T T G I APE ++
Sbjct: 136 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 291 TGKSSERTDVFGYGIMLLELVT-GQR 315
K + +D + YGI++ E+++ G+R
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 45/280 (16%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMISVAVHRNLLRLIGF 177
LG G FG+V+ TKVAVK + PG + AF E ++ H L++L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM----KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 178 CTTPTERLLVYPFMQNLSVAYRLRE----IKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
T ++ FM S+ L+ +P ++D+ + A G+ ++ +
Sbjct: 252 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQR- 303
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK 293
IHRD++AAN+L+ + DFGLA++++ + + + APE ++ G
Sbjct: 304 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 294 SSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNK 353
+ ++DV+ +GI+L+E+VT R I + + V R L +
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGR-IPYPGMS--------------------NPEVIRALER 400
Query: 354 NYNIQEVET----MIQVALLCTQASPEDRPAMSEVVRMLE 389
Y + E + + + C + PE+RP + +L+
Sbjct: 401 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPG--GDAAFQREVEMISVAVHRNLLRLIGF 177
LGQG FG+V+ G T+VA+K L PG AF +E +++ H L++L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGE--PVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ +Y + +S L +K GE L +A A G+ Y+ E N
Sbjct: 249 VSEEP----IYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 301
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
+HRD++AAN+L+ E+ V DFGL +L++ + + + APE G+ +
Sbjct: 302 -YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 296 ERTDVFGYGIMLLELVTGQR 315
++DV+ +GI+L EL T R
Sbjct: 361 IKSDVWSFGILLTELTTKGR 380
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 57/230 (24%)
Query: 117 KNVLGQGGFGKVYRG-VLADGTKV--AVKRLTDFESPGGDAAFQREVEMIS-VAVHRNLL 172
++V+G+G FG+V + + DG ++ A+KR+ ++ S F E+E++ + H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV-------------- 218
L+G C ++ Y E P +LD++ + RV
Sbjct: 87 NLLGAC-------------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 133
Query: 219 -----------ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 267
A ARG++YL + + IHR++ A N+L+ E++ A + DFGL++ +
Sbjct: 134 STLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQE 190
Query: 268 VRKTNVTTQVRGTMGHI-----APEYLSTGKSSERTDVFGYGIMLLELVT 312
V V+ TMG + A E L+ + +DV+ YG++L E+V+
Sbjct: 191 V-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 138
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V +M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL +++ D T + +
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 117 KNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+ V+G G FG+V G L K VA+K L + F E ++ H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
L G T T +++ FM+N S+ LR+ V+ V R G A G++YL +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLADM 154
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMG--HIAPEY 288
+HRD+ A N+L++ + V DFGL++ + D T+ + G + APE
Sbjct: 155 ---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 289 LSTGKSSERTDVFGYGIMLLELVT-GQRA 316
+ K + +DV+ YGI++ E+++ G+R
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 120 LGQGGFGKV---YRGVLADGT--KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FGKV DGT VAVK L + P + +QRE+E++ H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--------ARGL 226
G C E+ SV + + G + D++ R V L G+
Sbjct: 77 KGCCEDQGEK----------SVQLVMEYVPLGS-LRDYLPRHCVGLAQLLLFAQQICEGM 125
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
YLH IHR + A NVLLD D +GDFGLAK V + G +
Sbjct: 126 AYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
APE L K +DV+ +G+ L EL+T
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 212
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 212
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 227
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 227
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYR----GVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
+ D + LG+G FG+V G+ D K VAVK L D + + E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 160 VEMIS-VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPG---------- 206
+EM+ + H+N++ L+G CT P ++ Y NL R R PG
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR-PPGMEYSYDINRV 195
Query: 207 -EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E + + ARG+EYL K IHRD+ A NVL+ E+ + DFGLA+
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD 252
Query: 266 V-DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ ++ TT R + +APE L + ++DV+ +G+++ E+ T
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 229
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 120 LGQGGFGKV---YRGVLADGT--KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FGKV DGT VAVK L + P + +QRE+E++ H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--------ARGL 226
G C E+ SV + + G + D++ R V L G+
Sbjct: 76 KGCCEDQGEK----------SVQLVMEYVPLGS-LRDYLPRHCVGLAQLLLFAQQICEGM 124
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
YLH IHR + A NVLLD D +GDFGLAK V + G +
Sbjct: 125 AYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
APE L K +DV+ +G+ L EL+T
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 204
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 32/221 (14%)
Query: 119 VLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA--VHRNLLRLI 175
+ +G FG V++ ++ D V + L D +S +Q E E+ S H NLL+ I
Sbjct: 22 IKARGRFGCVWKAQLMNDFVAVKIFPLQDKQS------WQSEREIFSTPGMKHENLLQFI 75
Query: 176 GF----CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
E L+ F S+ L+ ++ W VA +RGL YLHE
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHE 130
Query: 232 HC--------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMG 282
P I HRD K+ NVLL D AV+ DFGLA + K T + GT
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR 190
Query: 283 HIAPEYLSTGKSSE-----RTDVFGYGIMLLELVTGQRAID 318
++APE L + + R D++ G++L ELV+ +A D
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 239
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 213
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 227
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 213
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 219
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + + M +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ--DIYRASYYRKGGCAMLPVKWM 213
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V M+N S+ LR+ V+ V R G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 128
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 129 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
N K LG+G FGKV+ D VAVK L D S F RE E+++
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-ASDNARKDFHREAELLTNL 72
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP-------GEPVLDWVTRK--R 217
H ++++ G C ++V+ +M++ + LR P G P + +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
+A A G+ YL + +HRD+ N L+ E+ +GDFG+++ DV T+
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVG 187
Query: 278 RGTMGHI---APEYLSTGKSSERTDVFGYGIMLLELVT 312
TM I PE + K + +DV+ G++L E+ T
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 32/215 (14%)
Query: 119 VLGQGGFGKVYRGVLA--DGT--KVAVKRLTDFESPGGDAAFQREVE-MISVAV------ 167
+LG+G FG V G L DGT KVAVK + D + QRE+E +S A
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK------LDNSSQREIEEFLSEAACMKDFS 94
Query: 168 HRNLLRLIGFCTTPTER-----LLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVAL 220
H N++RL+G C + + +++ PFM+ +L ++ G + T + +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQV 277
A G+EYL N +HRD+ A N +L +D V DFGL+K + D + ++
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM 211
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ IA E L+ + ++DV+ +G+ + E+ T
Sbjct: 212 --PVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + M +
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRAGYYRKGGCAMLPVKWM 230
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLL 172
F++ +G+G FG+V++G+ KV ++ D E + Q+E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
+ G T+ ++ M+ L L ++PG LD + +GL+YLH
Sbjct: 69 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 123
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG 292
K IHRD+KAANVLL E E + DFG+A + + T V GT +APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 179
Query: 293 KSSERTDVFGYGIMLLELVTGQ 314
+ D++ GI +EL G+
Sbjct: 180 AYDSKADIWSLGITAIELARGE 201
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 120 LGQGGFGKVY----RGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG+G FGKV+ +L + K VAVK L + S FQRE E++++ H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVR 84
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVL---DWVTRKRVALG--------A 222
G CT L+V+ +M++ + LR P +L + V + LG
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
A G+ YL +HRD+ N L+ + +GDFG+++ D+ T+ TM
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 199
Query: 283 HI---APEYLSTGKSSERTDVFGYGIMLLELVT 312
I PE + K + +DV+ +G++L E+ T
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 120 LGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG+VY G ++ +VAVK L + S + F E +IS H+N++R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP-VLDWVTRKRVALGAARGLEYLH 230
IG R ++ M + LRE +P +P L + VA A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 231 EHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKLVDVRKTNVTTQVRGTMGHI--- 284
E+ IHRD+ A N LL A +GDFG+A+ D+ + + M +
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRAGYYRKGGCAMLPVKWM 253
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
PE G + +TD + +G++L E+ +
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 120 LGQGGFGKVY----RGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG+G FGKV+ +L + K VAVK L + S FQRE E++++ H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVR 78
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVL---DWVTRKRVALG--------A 222
G CT L+V+ +M++ + LR P +L + V + LG
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
A G+ YL +HRD+ N L+ + +GDFG+++ D+ T+ TM
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 193
Query: 283 HI---APEYLSTGKSSERTDVFGYGIMLLELVT 312
I PE + K + +DV+ +G++L E+ T
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLL 172
F++ +G+G FG+V++G+ KV ++ D E + Q+E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
+ G T+ ++ M+ L L ++PG LD + +GL+YLH
Sbjct: 69 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 123
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVR-----GTMGHIAP 286
K IHRD+KAANVLL E E + DFG+A +L D TQ++ GT +AP
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD-------TQIKRNXFVGTPFWMAP 173
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQ 314
E + + D++ GI +EL G+
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 119 VLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA--VHRNLLRLI 175
V +G FG V++ +L + V + + D +S +Q E E+ S+ H N+L+ I
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQS------WQNEYEVYSLPGMKHENILQFI 84
Query: 176 GF----CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
G + + L+ F + S++ L+ V+ W +A ARGL YLHE
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHE 139
Query: 232 HC-------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGH 283
P I HRD+K+ NVLL + A + DFGLA + K+ T + GT +
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 284 IAPEYLSTGKSSE-----RTDVFGYGIMLLELVTGQRAID 318
+APE L + + R D++ G++L EL + A D
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 94 IAFGQLKRYSWRELQ-LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGG 152
+ F + ++ W E Q + D F + VLG+GGFG+V+ + K+ + + +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 153 DAAFQREV--EMISVAVHRNLLRLIGFC-TTPTERLLVYPFMQNLSVAYRLREI---KPG 206
+Q + + I VH + + + T T+ LV M + Y + + PG
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 207 --EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 264
EP + T + V+ GLE+LH+ II+RD+K NVLLD+D + D GLA
Sbjct: 286 FQEPRAIFYTAQIVS-----GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 265 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+ +T T GT G +APE L + D F G+ L E++ +
Sbjct: 338 ELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLL 172
F++ +G+G FG+V++G+ KV ++ D E + Q+E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
+ G T+ ++ M+ L L ++PG LD + +GL+YLH
Sbjct: 84 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 138
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVR-----GTMGHIAP 286
K IHRD+KAANVLL E E + DFG+A +L D TQ++ GT +AP
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD-------TQIKRNXFVGTPFWMAP 188
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQ 314
E + + D++ GI +EL G+
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q ++F LG+G FG VY + +LA KV K T E G + +REV
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILA--LKVLFK--TQLEKAGVEHQLRREV 63
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSRFDEQRTAT 116
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL + E + DFG + V + TT +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTT-L 170
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT+ ++ PE + E+ D++ G++ E + G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 158 SGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 94 IAFGQLKRYSWRELQ-LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGG 152
+ F + ++ W E Q + D F + VLG+GGFG+V+ + K+ + + +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 153 DAAFQREV--EMISVAVHRNLLRLIGFC-TTPTERLLVYPFMQNLSVAYRLREI---KPG 206
+Q + + I VH + + + T T+ LV M + Y + + PG
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 207 --EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 264
EP + T + V+ GLE+LH+ II+RD+K NVLLD+D + D GLA
Sbjct: 286 FQEPRAIFYTAQIVS-----GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 265 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+ +T T GT G +APE L + D F G+ L E++ +
Sbjct: 338 ELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 119 VLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNLLRLIG 176
++G+G FG+VY G +VA+ RL D E D AF+REV H N++ +G
Sbjct: 40 LIGKGRFGQVYHGRWHG--EVAI-RLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
C +P ++ + ++ +R+ K VLD +++A +G+ YLH
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---G 150
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV----RKTNVTTQVRGTMGHIAPEYLSTG 292
I+H+D+K+ NV D + V+ DFGL + V R+ + G + H+APE +
Sbjct: 151 ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209
Query: 293 KS---------SERTDVFGYGIMLLEL 310
S+ +DVF G + EL
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 94 IAFGQLKRYSWRELQ-LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGG 152
+ F + ++ W E Q + D F + VLG+GGFG+V+ + K+ + + +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 153 DAAFQREV--EMISVAVHRNLLRLIGFC-TTPTERLLVYPFMQNLSVAYRLREI---KPG 206
+Q + + I VH + + + T T+ LV M + Y + + PG
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 207 --EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 264
EP + T + V+ GLE+LH+ II+RD+K NVLLD+D + D GLA
Sbjct: 286 FQEPRAIFYTAQIVS-----GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 265 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+ +T T GT G +APE L + D F G+ L E++ +
Sbjct: 338 ELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 120 LGQGGFGKV---YRGVLAD--GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D G VAVK+L P FQRE++++ A+H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH-SGPDQQRDFQREIQILK-ALHSDFIV- 74
Query: 175 IGFCTTPTERLLVY-PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
R + Y P Q+L + + E P + D++ R R L A+R L Y + C
Sbjct: 75 -------KYRGVSYGPGRQSLRL---VMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 234 -------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
+ + +HRD+ A N+L++ + + DFGLAKL+ + K + G +
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
APE LS S ++DV+ +G++L EL T R L
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELL 244
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
R EV +++ LC SP+DRP+ S + L+
Sbjct: 245 EEGQRLPAPPACPAEVHELMK---LCWAPSPQDRPSFSALGPQLD 286
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 18/228 (7%)
Query: 96 FGQLKRYSWRELQ-LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA 154
F + ++ W E Q + D F + VLG+GGFG+V+ + K+ + + +
Sbjct: 168 FLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK 227
Query: 155 AFQREV--EMISVAVHRNLLRLIGFC-TTPTERLLVYPFMQNLSVAYRLREI---KPG-- 206
+Q + + I VH + + + T T+ LV M + Y + + PG
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 207 EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 266
EP + T + V+ GLE+LH+ II+RD+K NVLLD+D + D GLA +
Sbjct: 288 EPRAIFYTAQIVS-----GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 267 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+T T GT G +APE L + D F G+ L E++ +
Sbjct: 340 KAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMI 163
+L N S V+G G FG+V G L +K VA+K L + F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H N++RL G T ++V M+N S+ LR+ V+ V R G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTM 281
G++YL + +HRD+ A N+L++ + V DFGL++++ D T + +
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
+PE ++ K + +DV+ YGI+L E+++ G+R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLL 172
F++ +G+G FG+V++G+ KV ++ D E + Q+E+ ++S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
+ G T+ ++ M+ L L ++PG LD + +GL+YLH
Sbjct: 89 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 143
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGTMGHIAPEYLST 291
K IHRD+KAANVLL E E + DFG+A +L D + T GT +APE +
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 198
Query: 292 GKSSERTDVFGYGIMLLELVTGQ 314
+ D++ GI +EL G+
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 120 LGQGGFGKVY----RGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR 173
LG+G FGKV+ +L + K VAVK L + S FQRE E++++ H++++R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVR 107
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVL---DWVTRKRVALG--------A 222
G CT L+V+ +M++ + LR P +L + V + LG
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
A G+ YL +HRD+ N L+ + +GDFG+++ D+ T+ TM
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 222
Query: 283 HI---APEYLSTGKSSERTDVFGYGIMLLELVT 312
I PE + K + +DV+ +G++L E+ T
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 130/310 (41%), Gaps = 46/310 (14%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-----EIKPG 206
E++ +I + H N++ L+G CT P L+V + NLS R + KP
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 207 EPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
+ D++T + + + A+G+E+L + K IHRD+ A N+LL E + DFGLA
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 264 KLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRX 322
+ + V R + +APE + + ++DV+ +G++L E+ FS
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--------FSLG 247
Query: 323 XXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQASPEDR 378
++D R L + ++ + M Q L C P R
Sbjct: 248 ASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 295
Query: 379 PAMSEVVRML 388
P SE+V L
Sbjct: 296 PTFSELVEHL 305
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 35/287 (12%)
Query: 120 LGQGGFGKV---YRGVLAD--GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL-- 172
LG+G FG V L D G VAVK+L P FQRE++++ A+H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIVK 72
Query: 173 -RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
R + + E LV ++ P + D++ R R L A+R L Y +
Sbjct: 73 YRGVSYGPGRPELRLVMEYL-------------PSGCLRDFLQRHRARLDASRLLLYSSQ 119
Query: 232 HC-------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMG 282
C + + +HRD+ A N+L++ + + DFGLAKL+ + K + G +
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKR 342
APE LS S ++DV+ +G++L EL T R
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLE 239
Query: 343 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
L R EV +++ LC SP+DRP+ S + L+
Sbjct: 240 LLEEGQRLPAPPACPAEVHELMK---LCWAPSPQDRPSFSALGPQLD 283
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV 165
E L DN ++G+G +G VY+G L D VAVK S F E + V
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVF----SFANRQNFINEKNIYRV 61
Query: 166 AV--HRNLLRLIGFCTTPT-----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV 218
+ H N+ R I T E LLV + N S+ L DWV+ R+
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRL 116
Query: 219 ALGAARGLEYLH------EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVR-- 269
A RGL YLH +H P I HRD+ + NVL+ D V+ DFGL+ +L R
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 270 ----KTNVTTQVRGTMGHIAPEYLSTG-------KSSERTDVFGYGIMLLEL 310
+ N GT+ ++APE L + ++ D++ G++ E+
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 62
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 115
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 169
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 64
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 117
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 171
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 119 VLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G FG V G G KVAVK + + + AF E +++ H NL++L+G
Sbjct: 28 TIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 179 TTPTERL-LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
L +V +M S+ LR G VL + +L +EYL +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A NVL+ ED A V DFGL K + V+ T APE L K S +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 194
Query: 298 TDVFGYGIMLLELVTGQR 315
+DV+ +GI+L E+ + R
Sbjct: 195 SDVWSFGILLWEIYSFGR 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLL 172
F++ + +G+G FG+VY+G+ +V ++ D E + Q+E+ ++S +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
R G T+ ++ M+ L L +KPG L+ + +GL+YLH
Sbjct: 81 RYFGSYLKSTKLWII---MEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLHSE 135
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVR-----GTMGHIAP 286
+ IHRD+KAANVLL E + + DFG+A +L D TQ++ GT +AP
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD-------TQIKRNXFVGTPFWMAP 185
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQ 314
E + + D++ GI +EL G+
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 64
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T L+ + V L+++ D
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYIT 120
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGT 280
A L Y H + ++IHRD+K N+LL E + DFG + V + TT + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGT 174
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 120 LGQGGFGKV---YRGVLAD--GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D G VAVK+L P FQRE++++ A+H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH-SGPDQQRDFQREIQILK-ALHSDFIV- 87
Query: 175 IGFCTTPTERLLVY-PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
R + Y P Q+L + + E P + D++ R R L A+R L Y + C
Sbjct: 88 -------KYRGVSYGPGRQSLRL---VMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 234 -------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
+ + +HRD+ A N+L++ + + DFGLAKL+ + K + G +
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
APE LS S ++DV+ +G++L EL T R L
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
R EV +++ LC SP+DRP+ S + L+
Sbjct: 258 EEGQRLPAPPACPAEVHELMK---LCWAPSPQDRPSFSALGPQLD 299
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILA--LKVLFK--AQLEKAGVEHQLRREV 56
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 57 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 109
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 110 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 163
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 62
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 115
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 169
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 58
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 59 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 111
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 112 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 165
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 59
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 112
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQ 276
A L Y H + ++IHRD+K N+LL E + DFG + R+T++
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-- 167
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 59
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQ----KLSKFDEQRTAT 112
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + ++ T++
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTEL 166
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 119 VLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G FG V G G KVAVK + + + AF E +++ H NL++L+G
Sbjct: 13 TIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 179 TTPTERL-LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
L +V +M S+ LR G VL + +L +EYL +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A NVL+ ED A V DFGL K + V+ T APE L K S +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 179
Query: 298 TDVFGYGIMLLELVTGQR 315
+DV+ +GI+L E+ + R
Sbjct: 180 SDVWSFGILLWEIYSFGR 197
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 48/312 (15%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L + K IHRD+ A N+LL E + DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 262 LAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
LA+ + V R + +APE + + ++DV+ +G++L E+ FS
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--------FS 236
Query: 321 RXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQASPE 376
++D R L + ++ + M Q L C P
Sbjct: 237 LGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 377 DRPAMSEVVRML 388
RP SE+V L
Sbjct: 285 QRPTFSELVEHL 296
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 64
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 117
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 171
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 59
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 112
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQ 276
A L Y H + ++IHRD+K N+LL E + DFG + R+T++
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-- 167
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 168 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 48/312 (15%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L + K IHRD+ A N+LL E + DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 262 LAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
LA+ + V R + +APE + + ++DV+ +G++L E+ FS
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--------FS 236
Query: 321 RXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQASPE 376
++D R L + ++ + M Q L C P
Sbjct: 237 LGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 377 DRPAMSEVVRML 388
RP SE+V L
Sbjct: 285 QRPTFSELVEHL 296
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 60
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 113
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQ 276
A L Y H + ++IHRD+K N+LL E + DFG + R+T ++
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-- 168
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 169 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRL--TDFESPGGDAAFQREVEMIS 164
Q A ++F LG+G FG VY + A+K L E G + +REVE+ S
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL---G 221
H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 81 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITE 133
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
A L Y H + ++IHRD+K N+LL E + DFG + V + TT + GT+
Sbjct: 134 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTL 187
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
++ PE + E+ D++ G++ E + G+ +
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 130/312 (41%), Gaps = 48/312 (15%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L K IHRD+ A N+LL E + DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 193
Query: 262 LAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
LA+ + V R + +APE + + ++DV+ +G++L E+ FS
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--------FS 245
Query: 321 RXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQASPE 376
++D R L + ++ + M Q L C P
Sbjct: 246 LGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 377 DRPAMSEVVRML 388
RP SE+V L
Sbjct: 294 QRPTFSELVEHL 305
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 63
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 116
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 170
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 59
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQ----KLSKFDEQRTAT 112
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + V + TT +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-L 166
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 50/279 (17%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNLLR--LI 175
LG+GGF K + AD +V ++ P QRE + +++HR+L ++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIV----PKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ + + E+ +L+ R++ + AR G
Sbjct: 81 GF----------HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
+YLH + ++IHRD+K N+ L+ED E +GDFGLA V+ T + GT +IAP
Sbjct: 131 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAP 186
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAI 346
E LS S DV+ G ++ L+ G+ + S R K+ +
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----------CLKETYLRIKKNEYS 235
Query: 347 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 385
+ +++N ++IQ L Q P RP ++E++
Sbjct: 236 IPKHIN-----PVAASLIQKML---QTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 50/279 (17%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNLLR--LI 175
LG+GGF K + AD +V ++ P QRE + +++HR+L ++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIV----PKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ + + E+ +L+ R++ + AR G
Sbjct: 81 GF----------HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
+YLH + ++IHRD+K N+ L+ED E +GDFGLA V+ T + GT +IAP
Sbjct: 131 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAP 186
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAI 346
E LS S DV+ G ++ L+ G+ + S R K+ +
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----------CLKETYLRIKKNEYS 235
Query: 347 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 385
+ +++N ++IQ L Q P RP ++E++
Sbjct: 236 IPKHIN-----PVAASLIQKML---QTDPTARPTINELL 266
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 64
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 117
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQ 276
A L Y H + ++IHRD+K N+LL E + DFG + R+T++
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-- 172
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 173 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 60
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 113
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQ 276
A L Y H + ++IHRD+K N+LL E + DFG + R+T++
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC-- 168
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 169 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNLLR--LI 175
LG+GGF K + AD +V ++ P QRE + +++HR+L ++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIV----PKSLLLKPHQREKMSMEISIHRSLAHQHVV 84
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ + + E+ +L+ R++ + AR G
Sbjct: 85 GF----------HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 134
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
+YLH + ++IHRD+K N+ L+ED E +GDFGLA V+ T + GT +IAP
Sbjct: 135 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAP 190
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
E LS S DV+ G ++ L+ G+ + S
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRL--TDFESPGGDAAFQREVEMIS 164
Q A ++F LG+G FG VY + A+K L E G + +REVE+ S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL---G 221
H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 90 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITE 142
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
A L Y H + ++IHRD+K N+LL E + DFG + V + TT + GT+
Sbjct: 143 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTL 196
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
++ PE + E+ D++ G++ E + G+ +
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 120 LGQGGFGKV---YRGVLAD--GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D G VAVK+L P FQRE++++ A+H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH-SGPDQQRDFQREIQILK-ALHSDFIV- 75
Query: 175 IGFCTTPTERLLVY-PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
R + Y P Q+L + + E P + D++ R R L A+R L Y + C
Sbjct: 76 -------KYRGVSYGPGRQSLRL---VMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 234 -------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
+ + +HRD+ A N+L++ + + DFGLAKL+ + K + G +
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
APE LS S ++DV+ +G++L EL T R L
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELL 245
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
R EV +++ LC SP+DRP+ S + L+
Sbjct: 246 EEGQRLPAPPACPAEVHELMK---LCWAPSPQDRPSFSALGPQLD 287
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 76 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 131
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 119 VLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G FG V G G KVAVK + + + AF E +++ H NL++L+G
Sbjct: 200 TIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 179 TTPTERL-LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
L +V +M S+ LR G VL + +L +EYL +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A NVL+ ED A V DFGL K + V+ T APE L K S +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 366
Query: 298 TDVFGYGIMLLELVTGQR 315
+DV+ +GI+L E+ + R
Sbjct: 367 SDVWSFGILLWEIYSFGR 384
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 75 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 130
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 80 KGVCYSAGRRNLKL-IMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 77 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 132
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 83 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 138
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 27/271 (9%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VAVK + + S D FQ M+ ++ H L++ G C+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLS-HPKLVKFYGVCS 73
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 239
+V ++ N + LR G L+ + G+ +L H + IH
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 240 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTD 299
RD+ A N L+D D V DFG+ + V + + + + APE K S ++D
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 300 VFGYGIMLLELVT-GQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQ 358
V+ +GI++ E+ + G+ D E L L + +
Sbjct: 188 VWAFGILMWEVFSLGKMPYDL----------------YTNSEVVLKVSQGHRLYRPHLAS 231
Query: 359 EVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+T+ Q+ C PE RP +++ +E
Sbjct: 232 --DTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 81 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 136
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 80 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 84 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 139
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 82 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 137
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 56/316 (17%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L K IHRD+ A N+LL E + DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 193
Query: 262 LAKLV-----DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 316
LA+ + VRK + R + +APE + + ++DV+ +G++L E+
Sbjct: 194 LARDIYKDPDXVRKGD----ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI------ 243
Query: 317 IDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQ 372
FS ++D R L + ++ + M Q L C
Sbjct: 244 --FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
Query: 373 ASPEDRPAMSEVVRML 388
P RP SE+V L
Sbjct: 290 GEPSQRPTFSELVEHL 305
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 77 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 132
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 59
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 112
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + ++ T +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXL 166
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 95 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 150
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 34/216 (15%)
Query: 117 KNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAF--QREVEMISVAVHRNLLR 173
+ LG+G FGKV KVA+K ++ D +RE+ + + H ++++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-RKRVALGAAR-------- 224
L TTPT+ ++V + G + D++ +KR+ R
Sbjct: 74 LYDVITTPTDIVMVIEYA--------------GGELFDYIVEKKRMTEDEGRRFFQQIIC 119
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
+EY H H KI+HRD+K N+LLD++ + DFGL+ + + N G+ +
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNI--MTDGNFLKTSCGSPNYA 174
Query: 285 APEYLSTGK--SSERTDVFGYGIMLLELVTGQRAID 318
APE ++ GK + DV+ GI+L ++ G+ D
Sbjct: 175 APEVIN-GKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 117 KNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+ V+G G FG+V G L K VA+K L + F E ++ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
L G T T +++ FM+N S+ LR+ V+ V R G A G++YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLADM 128
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMG--HIAPEY 288
+HR + A N+L++ + V DFGL++ + D T+ + G + APE
Sbjct: 129 ---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 289 LSTGKSSERTDVFGYGIMLLELVT-GQRA 316
+ K + +DV+ YGI++ E+++ G+R
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q ++F LG+G FG VY + +LA KV K T E G + +REV
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILA--LKVLFK--TQLEKAGVEHQLRREV 63
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSRFDEQRTAT 116
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL + E + DFG + + +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC-- 171
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT+ ++ PE + E+ D++ G++ E + G
Sbjct: 172 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 120 LGQGGFGKVYRGVLADGT----KVAVKRLTDFESPGGDAA----FQREVEMISVAVHRNL 171
LG GG VY LA+ T KVA+K + F P F+REV S H+N+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAI--FIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ +I LV +++ +++ + P L T G+++ H+
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHD 129
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
+I+HRD+K N+L+D + + DFG+AK + T V GT+ + +PE
Sbjct: 130 M---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 292 GKSSERTDVFGYGIMLLELVTGQ 314
+ E TD++ GI+L E++ G+
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGE 209
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 52/314 (16%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L + K IHRD+ A N+LL E + DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 262 LAKLVDVRKTNVTTQ---VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
LA+ D+ K + R + +APE + + ++DV+ +G++L E+
Sbjct: 185 LAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI-------- 234
Query: 319 FSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQAS 374
FS ++D R L + ++ + M Q L C
Sbjct: 235 FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 282
Query: 375 PEDRPAMSEVVRML 388
P RP SE+V L
Sbjct: 283 PSQRPTFSELVEHL 296
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L K IHRD+ A N+LL E + DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 184
Query: 262 LAKLVDVRKTNVTTQ---VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
LA+ D+ K + R + +APE + + ++DV+ +G++L E+
Sbjct: 185 LAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI-------- 234
Query: 319 FSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQAS 374
FS ++D R L + ++ + M Q L C
Sbjct: 235 FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 282
Query: 375 PEDRPAMSEVVRML 388
P RP SE+V L
Sbjct: 283 PSQRPTFSELVEHL 296
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKVYR---GVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 108 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 163
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 120 LGQGGFGKVY---RGVLADGT--KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FGKV DGT VAVK L P + +++E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--------ARGL 226
G C E+ L + E P + D++ R + L G+
Sbjct: 82 KGCCEDQGEKSLQL-----------VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGM 130
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
YLH IHR++ A NVLLD D +GDFGLAK V + G +
Sbjct: 131 AYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
APE L K +DV+ +G+ L EL+T
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 120 LGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FGKV G +VAVK L A ++E+E++ H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 175 IGFCTTPTER--LLVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVALGAARGLEYLHE 231
G CT L+ F+ + S L+E P + ++ + + A+ +G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGS----LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV--RGTMGHIAPEYL 289
+ +HRD+ A NVL++ + + +GDFGL K ++ K T + + APE L
Sbjct: 133 R---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 290 STGKSSERTDVFGYGIMLLELVT 312
K +DV+ +G+ L EL+T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 95 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 150
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L K IHRD+ A N+LL E + DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 193
Query: 262 LAKLVDVRKTNVTTQ---VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
LA+ D+ K + R + +APE + + ++DV+ +G++L E+
Sbjct: 194 LAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI-------- 243
Query: 319 FSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQAS 374
FS ++D R L + ++ + M Q L C
Sbjct: 244 FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 291
Query: 375 PEDRPAMSEVVRML 388
P RP SE+V L
Sbjct: 292 PSQRPTFSELVEHL 305
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 54/281 (19%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNLLR--LI 175
LG+GGF K + AD +V ++ P QRE + +++HR+L ++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIV----PKSLLLKPHQREKMSMEISIHRSLAHQHVV 78
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ + + E+ +L+ R++ + AR G
Sbjct: 79 GF----------HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 128
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHI 284
+YLH + ++IHRD+K N+ L+ED E +GDFGLA V D + V GT +I
Sbjct: 129 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYI 182
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLD 344
APE LS S DV+ G ++ L+ G+ + S R K+ +
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----------CLKETYLRIKKNE 231
Query: 345 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 385
+ +++N ++IQ L Q P RP ++E++
Sbjct: 232 YSIPKHIN-----PVAASLIQKML---QTDPTARPTINELL 264
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRL--TDFESPGGDAAFQREVEMIS 164
Q A ++F LG+G FG VY + + A+K L E G + +REVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL---G 221
H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 64 HLRHPNILRLYGYFHDSTR---VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 116
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
A L Y H + K+IHRD+K N+LL E + DFG + ++ + GT+
Sbjct: 117 LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHA---PSSRRAALCGTL 170
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
++ PE + E+ D++ G++ E + G+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 120 LGQGGFGKV--YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+GGF V G L DG A+KR+ E + A QRE +M + H N+LRL+ +
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEA-QREADMHRLFNHPNILRLVAY 94
Query: 178 CT----TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
C E L+ PF + ++ + +K L + LG RGLE +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL----VDVRKTNVTTQ----VRGTMGHIA 285
HRD+K N+LL ++ + V+ D G V+ + +T Q R T+ + A
Sbjct: 153 -KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 286 PEYLSTGKSS---ERTDVFGYGIMLLELVTGQRAIDF 319
PE S ERTDV+ G +L ++ G+ D
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 120 LGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FGKV G +VAVK L A ++E+E++ H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 175 IGFCTTPTER--LLVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVALGAARGLEYLHE 231
G CT L+ F+ + S L+E P + ++ + + A+ +G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGS----LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV--RGTMGHIAPEYL 289
+ +HRD+ A NVL++ + + +GDFGL K ++ K T + + APE L
Sbjct: 145 R---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 290 STGKSSERTDVFGYGIMLLELVT 312
K +DV+ +G+ L EL+T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 52/314 (16%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR-------EIK 204
E++ +I + H N++ L+G CT P L+V + NLS R + ++
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L K IHRD+ A N+LL E + DFG
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 230
Query: 262 LAKLVDVRKTNVTTQ---VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
LA+ D+ K + R + +APE + + ++DV+ +G++L E+
Sbjct: 231 LAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI-------- 280
Query: 319 FSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQAS 374
FS ++D R L + ++ + M Q L C
Sbjct: 281 FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 328
Query: 375 PEDRPAMSEVVRML 388
P RP SE+V L
Sbjct: 329 PSQRPTFSELVEHL 342
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 120 LGQGGFGKVY---RGVLADGT--KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FGKV DGT VAVK L P + +++E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--------ARGL 226
G C E+ L + E P + D++ R + L G+
Sbjct: 82 KGCCEDQGEKSLQL-----------VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGM 130
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
YLH IHR++ A NVLLD D +GDFGLAK V + G +
Sbjct: 131 AYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
APE L K +DV+ +G+ L EL+T
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL-----ADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ +N LG G FGKV D KVAVK L A E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 162 MIS-VAVHRNLLRLIGFCTTPTERLLVYPF------MQNLSVAYRLREIKPGEPVLDWVT 214
++S + H N++ L+G CT L++ + + L R+ E P + +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 215 RKRVALG----AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVR 269
R L A+G+ +L + IHRDV A NVLL A +GDFGLA+ +++
Sbjct: 162 STRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
V R + +APE + + ++DV+ YGI+L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 33/245 (13%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFE 148
AF L+ W + N LG+G FGKV + A T VAVK L +
Sbjct: 9 AFKILEDPKW---EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 149 SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE---IKP 205
SP E ++ H ++++L G C+ LL+ + + S+ LRE + P
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 206 G---------EPVLDWVTRKRVALG--------AARGLEYLHEHCNPKIIHRDVKAANVL 248
G LD + + +G ++G++YL E K++HRD+ A N+L
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNIL 182
Query: 249 LDEDFEAVVGDFGLAKLVDVRKTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 307
+ E + + DFGL++ V + V +Q R + +A E L + ++DV+ +G++L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 308 LELVT 312
E+VT
Sbjct: 243 WEIVT 247
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ +D + + +G+EYL
Sbjct: 80 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ D V + APE L+
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 117 KNVLGQGGFGKVYRG------VLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
K LG+G FGKV+ D VAVK L D + FQRE E+++ H +
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLTNLQHEH 78
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVL-DWVTRK-----------RV 218
+++ G C ++V+ +M++ + LR P +L D R+ +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 219 ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR 278
A A G+ YL + +HRD+ N L+ + +GDFG+++ DV T+
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGG 193
Query: 279 GTMGHI---APEYLSTGKSSERTDVFGYGIMLLELVT 312
TM I PE + K + +DV+ +G++L E+ T
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNL--LRLI 175
LG+GGF K Y D +V ++ P Q+E +A+H++L ++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVV----PKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 89
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ Y + EI +L+ R++ V AR G+
Sbjct: 90 GF----------HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 139
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV---RKTNVTTQVRGTMGH 283
+YLH N ++IHRD+K N+ L++D + +GDFGLA ++ RK ++ GT +
Sbjct: 140 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC----GTPNY 192
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
IAPE L S D++ G +L L+ G+ + S
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 120 LGQGGFGKVYRG----VLADGTKVAVKRLTD--FESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG V RG VAVK L P F REV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
L G TP ++ V S+ RLR+ + G +L T R A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLG--TLSRYAVQVAEGMGYLE--- 132
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV--RGTMGHIAPEYLST 291
+ + IHRD+ A N+LL +GDFGL + + + Q + APE L T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 292 GKSSERTDVFGYGIMLLELVT 312
S +D + +G+ L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 119 VLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G FG V G G KVAVK + + + AF E +++ H NL++L+G
Sbjct: 19 TIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 179 TTPTERL-LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
L +V +M S+ LR G VL + +L +EYL +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A NVL+ ED A V DFGL K + V+ T APE L S +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTK 185
Query: 298 TDVFGYGIMLLELVTGQR 315
+DV+ +GI+L E+ + R
Sbjct: 186 SDVWSFGILLWEIYSFGR 203
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 120 LGQGGFGKVYRG----VLADGTKVAVKRLTD--FESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG V RG VAVK L P F REV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
L G TP ++ V S+ RLR+ + G +L T R A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLG--TLSRYAVQVAEGMGYLE--- 128
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV--RGTMGHIAPEYLST 291
+ + IHRD+ A N+LL +GDFGL + + + Q + APE L T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 292 GKSSERTDVFGYGIMLLELVT 312
S +D + +G+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 40/221 (18%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLT--DFESPGGDAAFQREVEMIS 164
+D + + VLG+G FG+V +L G + AVK ++ + + REV+++
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA-LGA 222
H N+++L Y F ++ Y + E+ G + D ++RKR + + A
Sbjct: 88 QLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 134
Query: 223 AR-------GLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKLVDVRKTN 272
AR G+ Y+H++ KI+HRD+K N+LL+ +D + DFGL+ + K
Sbjct: 135 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-K 190
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ ++ GT +IAPE L G E+ DV+ G++L L++G
Sbjct: 191 MKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 120 LGQGGFGKVYRG----VLADGTKVAVKRLTD--FESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG V RG VAVK L P F REV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
L G TP ++ V S+ RLR+ + G +L T R A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLG--TLSRYAVQVAEGMGYLE--- 132
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV--RGTMGHIAPEYLST 291
+ + IHRD+ A N+LL +GDFGL + + + Q + APE L T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 292 GKSSERTDVFGYGIMLLELVT 312
S +D + +G+ L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 120 LGQGGFGKVYRG----VLADGTKVAVKRLTD--FESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG V RG VAVK L P F REV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
L G TP ++ V S+ RLR+ + G +L T R A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLG--TLSRYAVQVAEGMGYLE--- 128
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV--RGTMGHIAPEYLST 291
+ + IHRD+ A N+LL +GDFGL + + + Q + APE L T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 292 GKSSERTDVFGYGIMLLELVT 312
S +D + +G+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 120 LGQGGFGKVYRG----VLADGTKVAVKRLTD--FESPGGDAAFQREVEMISVAVHRNLLR 173
LG G FG V RG VAVK L P F REV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
L G TP ++ V S+ RLR+ + G +L T R A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLG--TLSRYAVQVAEGMGYLE--- 128
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV--RGTMGHIAPEYLST 291
+ + IHRD+ A N+LL +GDFGL + + + Q + APE L T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 292 GKSSERTDVFGYGIMLLELVT 312
S +D + +G+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 61
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 114
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + +FG + V + TT +
Sbjct: 115 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-L 168
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNLLR--LI 175
LG+GGF K + AD +V ++ P QRE + +++HR+L ++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIV----PKSLLLKPHQREKMSMEISIHRSLAHQHVV 102
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ + + E+ +L+ R++ + AR G
Sbjct: 103 GF----------HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 152
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHI 284
+YLH + ++IHRD+K N+ L+ED E +GDFGLA V D + V GT +I
Sbjct: 153 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYI 206
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
APE LS S DV+ G ++ L+ G+ + S
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 48/310 (15%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D + LG+G FG+V G+ T VAVK L + + A
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR--EIKPGEPV 209
E++ +I + H N++ L+G CT P L+V + NLS R + E P + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 210 L-DWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
D++T + + + A+G+E+L + K IHRD+ A N+LL E + DFGLA+
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR- 192
Query: 266 VDVRKTNVTTQ---VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRX 322
D+ K + R + +APE + + ++DV+ +G++L E+ FS
Sbjct: 193 -DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--------FSLG 243
Query: 323 XXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQASPEDR 378
++D R L + ++ + M Q L C P R
Sbjct: 244 ASPYPGV------------KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 291
Query: 379 PAMSEVVRML 388
P SE+V L
Sbjct: 292 PTFSELVEHL 301
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 77 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 132
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHIAPEYLSTG 292
+ IHRD+ N+L++ + +GDFGL K++ K + G + APE L+
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 33/245 (13%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFE 148
AF L+ W + N LG+G FGKV + A T VAVK L +
Sbjct: 9 AFKILEDPKW---EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 149 SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE---IKP 205
SP E ++ H ++++L G C+ LL+ + + S+ LRE + P
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 206 G---------EPVLDWVTRKRVALG--------AARGLEYLHEHCNPKIIHRDVKAANVL 248
G LD + + +G ++G++YL E K++HRD+ A N+L
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNIL 182
Query: 249 LDEDFEAVVGDFGLAKLVDVRKTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 307
+ E + + DFGL++ V + V +Q R + +A E L + ++DV+ +G++L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 308 LELVT 312
E+VT
Sbjct: 243 WEIVT 247
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 62
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 115
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + +FG + V + TT +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-L 169
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 47/311 (15%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D + LG+G FG+V G+ T VAVK L + + A
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLREIK------P 205
E++ +I + H N++ L+G CT P L+V + NLS R + + P
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 206 GEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
+ D++T + + + A+G+E+L K IHRD+ A N+LL E + DFGL
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 263 AKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSR 321
A+ + V R + +APE + + ++DV+ +G++L E+ FS
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--------FSL 246
Query: 322 XXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQASPED 377
++D R L + ++ + M Q L C P
Sbjct: 247 GASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 294
Query: 378 RPAMSEVVRML 388
RP SE+V L
Sbjct: 295 RPTFSELVEHL 305
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 60
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 113
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + + +
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC-- 168
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 169 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNLLR--LI 175
LG+GGF K + AD +V ++ P QRE + +++HR+L ++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIV----PKSLLLKPHQREKMSMEISIHRSLAHQHVV 104
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ + + E+ +L+ R++ + AR G
Sbjct: 105 GF----------HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 154
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHI 284
+YLH + ++IHRD+K N+ L+ED E +GDFGLA V D + V GT +I
Sbjct: 155 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYI 208
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
APE LS S DV+ G ++ L+ G+ + S
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 107 LQLATDNFSEKNV-----LGQGGFGKVYRG----VLADGTKVAVKRLTD--FESPGGDAA 155
LQ T EK++ LG G FG V RG VAVK L P
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 156 FQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
F REV + HRNL+RL G TP ++ V S+ RLR+ + G +L T
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLG--TL 123
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT 275
R A+ A G+ YL + + IHRD+ A N+LL +GDFGL + + +
Sbjct: 124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 276 QV--RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
Q + APE L T S +D + +G+ L E+ T
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL-----ADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ +N LG G FGKV D KVAVK L A E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 162 MIS-VAVHRNLLRLIGFCTTPTERLLVYPF------MQNLSVAYRLREIKPGEPVLDWVT 214
++S + H N++ L+G CT L++ + + L R+ E P + +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 215 RKRVALG----AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVR 269
R L A+G+ +L + IHRDV A NVLL A +GDFGLA+ +++
Sbjct: 162 STRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
V R + +APE + + ++DV+ YGI+L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 107 LQLATDNFSEKNV-----LGQGGFGKVYRG----VLADGTKVAVKRLTD--FESPGGDAA 155
LQ T EK++ LG G FG V RG VAVK L P
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 156 FQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
F REV + HRNL+RL G TP ++ V S+ RLR+ + G +L T
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ-GHFLLG--TL 123
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT 275
R A+ A G+ YL + + IHRD+ A N+LL +GDFGL + + +
Sbjct: 124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 276 QV--RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
Q + APE L T S +D + +G+ L E+ T
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 64
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T L+ + V L+++ D
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYIT 120
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGT 280
A L Y H + ++IHRD+K N+LL E + DFG + ++ + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLXGT 174
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNL--LRLI 175
LG+GGF K Y D +V ++ P Q+E +A+H++L ++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVV----PKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ Y + EI +L+ R++ V AR G+
Sbjct: 106 GF----------HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV---RKTNVTTQVRGTMGH 283
+YLH N ++IHRD+K N+ L++D + +GDFGLA ++ RK ++ GT +
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC----GTPNY 208
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
IAPE L S D++ G +L L+ G+ + S
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G +G VY+ G A+K++ + E G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 179 TTPTERLLVYPFM-QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
T +LV+ + Q+L +L ++ G L+ VT K L G+ Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLK---KLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL-STGKSSE 296
+HRD+K N+L++ + E + DFGLA+ + T +V T+ + AP+ L + K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 297 RTDVFGYGIMLLELVTG 313
D++ G + E+V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G +G VY+ G A+K++ + E G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 179 TTPTERLLVYPFM-QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
T +LV+ + Q+L +L ++ G L+ VT K L G+ Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLK---KLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL-STGKSSE 296
+HRD+K N+L++ + E + DFGLA+ + T +V T+ + AP+ L + K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 297 RTDVFGYGIMLLELVTG 313
D++ G + E+V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 46/224 (20%)
Query: 111 TDNFSEKNVLGQGGFGKVY---------RGVLADGTKVAVKRLTDFESPGGDAAFQREVE 161
+D + + VLG+G FG+V + +K VK+ TD ES REV+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES------LLREVQ 78
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA- 219
++ H N+++L Y F ++ Y + E+ G + D ++RKR +
Sbjct: 79 LLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
Query: 220 LGAAR-------GLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKLVDVR 269
+ AAR G+ Y+H++ KI+HRD+K N+LL+ +D + DFGL+ +
Sbjct: 126 VDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
K + ++ GT +IAPE L G E+ DV+ G++L L++G
Sbjct: 183 K-KMKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNL--LRLI 175
LG+GGF K Y D +V ++ P Q+E +A+H++L ++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVV----PKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ Y + EI +L+ R++ V AR G+
Sbjct: 106 GF----------HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
+YLH N ++IHRD+K N+ L++D + +GDFGLA ++ T + GT +IAP
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
E L S D++ G +L L+ G+ + S
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 62
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 115
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + + + +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD---DL 169
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 48/310 (15%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D + LG+G FG+V G+ T VAVK L + + A
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLR--EIKPGEPV 209
E++ +I + H N++ L+G CT P L+V + NLS R + E P + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 210 L-DWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
D++T + + + A+G+E+L + K IHRD+ A N+LL E + DFGLA+
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR- 192
Query: 266 VDVRKTNVTTQ---VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRX 322
D+ K + R + +APE + + ++DV+ +G++L E+ +
Sbjct: 193 -DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------- 241
Query: 323 XXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQASPEDR 378
++D R L + ++ + M Q L C P R
Sbjct: 242 ----------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 291
Query: 379 PAMSEVVRML 388
P SE+V L
Sbjct: 292 PTFSELVEHL 301
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 120 LGQGGFGKVY---RGVLADGT--KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FGKV DGT VAVK L P + +++E++++ H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA--------ARGL 226
G C L + E P + D++ R + L G+
Sbjct: 99 KGCCEDAGAASLQL-----------VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGM 147
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
YLH IHRD+ A NVLLD D +GDFGLAK V + G +
Sbjct: 148 AYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT 312
APE L K +DV+ +G+ L EL+T
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 37/234 (15%)
Query: 96 FGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPG 151
G ++ W++ + D + ++VLG G F +V +LA+ + VA+K + G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEG 58
Query: 152 GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD 211
+ + + E+ ++ H N++ L + +Y MQ +S G + D
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGH---LYLIMQLVS----------GGELFD 105
Query: 212 WVTRK---------RVALGAARGLEYLHEHCNPKIIHRDVKAANVL---LDEDFEAVVGD 259
+ K R+ ++YLH + I+HRD+K N+L LDED + ++ D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 260 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
FGL+K+ D +V + GT G++APE L+ S+ D + G++ L+ G
Sbjct: 163 FGLSKMED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 59
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 112
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + ++ +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAAL 166
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 62
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 115
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + ++ +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXL 169
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 61
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 114
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + ++ +
Sbjct: 115 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXL 168
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 37/234 (15%)
Query: 96 FGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPG 151
G ++ W++ + D + ++VLG G F +V +LA+ + VA+K + G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEG 58
Query: 152 GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD 211
+ + + E+ ++ H N++ L + +Y MQ +S G + D
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGH---LYLIMQLVS----------GGELFD 105
Query: 212 WVTRK---------RVALGAARGLEYLHEHCNPKIIHRDVKAANVL---LDEDFEAVVGD 259
+ K R+ ++YLH + I+HRD+K N+L LDED + ++ D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 260 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
FGL+K+ D +V + GT G++APE L+ S+ D + G++ L+ G
Sbjct: 163 FGLSKMED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 37/234 (15%)
Query: 96 FGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPG 151
G ++ W++ + D + ++VLG G F +V +LA+ + VA+K + G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEG 58
Query: 152 GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD 211
+ + + E+ ++ H N++ L + +Y MQ +S G + D
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGH---LYLIMQLVS----------GGELFD 105
Query: 212 WVTRK---------RVALGAARGLEYLHEHCNPKIIHRDVKAANVL---LDEDFEAVVGD 259
+ K R+ ++YLH + I+HRD+K N+L LDED + ++ D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 260 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
FGL+K+ D +V + GT G++APE L+ S+ D + G++ L+ G
Sbjct: 163 FGLSKMED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 85
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQ----KLSKFDEQRTAT 138
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQ 276
A L Y H + ++IHRD+K N+LL E + DFG + R+ ++
Sbjct: 139 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-- 193
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 194 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 34/228 (14%)
Query: 105 RELQLATDNFSEKNV-LGQGGFGKVYRGVLADGTK---VAVKRLTDFESPGGDAAFQREV 160
++L L DN ++ LG G FG V +GV K VA+K L RE
Sbjct: 2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
+++ + ++RLIG C L++ E+ G P+ ++ KR +
Sbjct: 62 QIMHQLDNPYIVRLIGVCQAEALMLVM--------------EMAGGGPLHKFLVGKREEI 107
Query: 221 GAAR----------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+ G++YL E +HRD+ A NVLL A + DFGL+K +
Sbjct: 108 PVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164
Query: 271 TNVTTQVRG--TMGHIAPEYLSTGKSSERTDVFGYGIMLLE-LVTGQR 315
+ T + G + APE ++ K S R+DV+ YG+ + E L GQ+
Sbjct: 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+G+G +G VY+ G A+K++ + E G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 179 TTPTERLLVYPFM-QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
T +LV+ + Q+L +L ++ G L+ VT K L G+ Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLK---KLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL-STGKSSE 296
+HRD+K N+L++ + E + DFGLA+ + T ++ T+ + AP+ L + K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 297 RTDVFGYGIMLLELVTG 313
D++ G + E+V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 52/293 (17%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+F E ++G GGFG+V++ DG +KR+ + +REV+ ++ H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV-----KYNNEKAEREVKALAKLDHVNI 66
Query: 172 LRL----IGFCTTP-----------TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK 216
+ GF P T+ L + + + E + GE LD V
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLAL 125
Query: 217 RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQ 276
+ +G++Y+H + K+I+RD+K +N+ L + + +GDFGL + ++ +
Sbjct: 126 ELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXR 180
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV-TGQRAIDFSRXXXXXXXXXXXXXX 335
+GT+ +++PE +S+ + D++ G++L EL+ A + S+
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR-------- 232
Query: 336 XXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRML 388
D I+ +K + +T++Q L PEDRP SE++R L
Sbjct: 233 --------DGIISDIFDK-----KEKTLLQKLL---SKKPEDRPNTSEILRTL 269
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 59
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 112
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + ++ +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXL 166
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 46/224 (20%)
Query: 111 TDNFSEKNVLGQGGFGKVY---------RGVLADGTKVAVKRLTDFESPGGDAAFQREVE 161
+D + + VLG+G FG+V + +K VK+ TD ES REV+
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES------LLREVQ 101
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA- 219
++ H N+++L Y F ++ Y + E+ G + D ++RKR +
Sbjct: 102 LLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 148
Query: 220 LGAAR-------GLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKLVDVR 269
+ AAR G+ Y+H++ KI+HRD+K N+LL+ +D + DFGL+ +
Sbjct: 149 VDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
K + ++ GT +IAPE L G E+ DV+ G++L L++G
Sbjct: 206 K-KMKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFESPGGDAAFQREVE--M 162
+++L ++F +LG+G FGKV+ + A+K L D VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 163 ISVAVHRNLLRLIGFCTTPTER--LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
+S+A L + FCT T+ V ++ + Y ++ D A
Sbjct: 72 LSLAWEHPFLTHM-FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAA 126
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK---LVDVRKTNVTTQV 277
GL++LH + I++RD+K N+LLD+D + DFG+ K L D + T +
Sbjct: 127 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK----TNEF 179
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
GT +IAPE L K + D + +G++L E++ GQ
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 24/237 (10%)
Query: 84 VDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEK-NVLGQGGFGKVYRGVLADGTKVAVK 142
VD+ E + F +K+Y L ++F E LG G FGKVY+ + + +A
Sbjct: 11 VDLGTE---NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 143 RLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE 202
++ D +S + E+++++ H N+++L+ ++ F +V + E
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
+ E L + V L YLH++ KIIHRD+KA N+L D + + DFG+
Sbjct: 128 L---ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 263 AKLVDVRKTNVTTQVR----GTMGHIAPEYLSTGKSSER-----TDVFGYGIMLLEL 310
+ K T Q R GT +APE + S +R DV+ GI L+E+
Sbjct: 182 SA-----KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-------RGVLADGTKVAVKRLTDFESPGGDAAFQREV 160
Q A ++F LG+G FG VY + +LA KV K E G + +REV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFK--AQLEKAGVEHQLRREV 62
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
E+ S H N+LRL G+ T VY ++ + RE++ L +R A
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQK----LSKFDEQRTAT 115
Query: 221 ---GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A L Y H + ++IHRD+K N+LL E + DFG + ++ +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAAL 169
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
GT+ ++ PE + E+ D++ G++ E + G+ +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 120 LGQGGFGKV---YRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
LG+G FG V L D T VAVK+L + F+RE+E++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G C + R L M+ L ++ + +D + + +G+EYL
Sbjct: 78 KGVCYSAGRRNLKL-IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 133
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHIAPEYLSTG 292
+ IHR++ N+L++ + +GDFGL K++ K + G + APE L+
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 293 KSSERTDVFGYGIMLLELVT 312
K S +DV+ +G++L EL T
Sbjct: 194 KFSVASDVWSFGVVLYELFT 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 46/224 (20%)
Query: 111 TDNFSEKNVLGQGGFGKVY---------RGVLADGTKVAVKRLTDFESPGGDAAFQREVE 161
+D + + VLG+G FG+V + +K VK+ TD ES REV+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES------LLREVQ 102
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA- 219
++ H N+++L Y F ++ Y + E+ G + D ++RKR +
Sbjct: 103 LLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 149
Query: 220 LGAAR-------GLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKLVDVR 269
+ AAR G+ Y+H++ KI+HRD+K N+LL+ +D + DFGL+ +
Sbjct: 150 VDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
K + ++ GT +IAPE L G E+ DV+ G++L L++G
Sbjct: 207 K-KMKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 37/217 (17%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD--AAFQREVEMISVAVHRNL--LRLI 175
LG+GGF K Y D +V ++ P Q+E +A+H++L ++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVV----PKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR-VALGAAR--------GL 226
GF + F ++ Y + EI +L+ R++ V AR G+
Sbjct: 106 GF----------HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV 155
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV---RKTNVTTQVRGTMGH 283
+YLH N ++IHRD+K N+ L++D + +GDFGLA ++ RK + GT +
Sbjct: 156 QYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC----GTPNY 208
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 320
IAPE L S D++ G +L L+ G+ + S
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 33/245 (13%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFE 148
AF L+ W + N LG+G FGKV + A T VAVK L +
Sbjct: 9 AFKILEDPKW---EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 149 SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE---IKP 205
SP E ++ H ++++L G C+ LL+ + + S+ LRE + P
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 206 G---------EPVLDWVTRKRVALG--------AARGLEYLHEHCNPKIIHRDVKAANVL 248
G LD + + +G ++G++YL E ++HRD+ A N+L
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNIL 182
Query: 249 LDEDFEAVVGDFGLAKLVDVRKTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 307
+ E + + DFGL++ V + V +Q R + +A E L + ++DV+ +G++L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 308 LELVT 312
E+VT
Sbjct: 243 WEIVT 247
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 113 NFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHR 169
N+ + +G+G F KV R VL G +VAVK + + +P REV ++ + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAAR 224
N+++L F TE+ L Y + E G V D++ +++ A R
Sbjct: 75 NIVKL--FEVIETEKTL-----------YLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 121
Query: 225 GLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGH 283
+ ++C+ K I+HRD+KA N+LLD D + DFG + V N G+ +
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV--GNKLDTFCGSPPY 179
Query: 284 IAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
APE K DV+ G++L LV+G D
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLSFC 119
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 104 WRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQRE 159
W++ + D + ++VLG G F +V +LA+ + VA+K + G + + + E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 160 VEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK--- 216
+ ++ H N++ L + L+ MQ +S G + D + K
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLI---MQLVS----------GGELFDRIVEKGFY 113
Query: 217 ------RVALGAARGLEYLHEHCNPKIIHRDVKAANVL---LDEDFEAVVGDFGLAKLVD 267
R+ ++YLH + I+HRD+K N+L LDED + ++ DFGL+K+ D
Sbjct: 114 TERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED 170
Query: 268 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+V + GT G++APE L+ S+ D + G++ L+ G
Sbjct: 171 --PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVAL 220
M+S+ H ++R+ G + ++ +++ + LR+ + PV K A
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV-----AKFYAA 113
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGT 280
LEYLH II+RD+K N+LLD++ + DFG AK V +VT + GT
Sbjct: 114 EVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGT 166
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+IAPE +ST ++ D + +GI++ E++ G
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 84 VDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEK-NVLGQGGFGKVYRGVLADGTKVAVK 142
VD+ E + F +K+Y L ++F E LG G FGKVY+ + + +A
Sbjct: 11 VDLGTE---NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 143 RLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE 202
++ D +S + E+++++ H N+++L+ ++ F +V + E
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
+ E L + V L YLH++ KIIHRD+KA N+L D + + DFG+
Sbjct: 128 L---ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER-----TDVFGYGIMLLEL 310
+ + R GT +APE + S +R DV+ GI L+E+
Sbjct: 182 SA-KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 131/314 (41%), Gaps = 52/314 (16%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV---YPFMQNLSVAYRLREIK------- 204
E++ +I + H N++ L+G CT P L+V + NLS R + +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 205 PGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
P + D++T + + + A+G+E+L K IHRD+ A N+LL E + DFG
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 195
Query: 262 LAKLVDVRKTNVTTQ---VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
LA+ D+ K + R + +APE + + ++DV+ +G++L E+
Sbjct: 196 LAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI-------- 245
Query: 319 FSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE----TMIQVALLCTQAS 374
FS ++D R L + ++ + M Q L C
Sbjct: 246 FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 293
Query: 375 PEDRPAMSEVVRML 388
P RP SE+V L
Sbjct: 294 PSQRPTFSELVEHL 307
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 65/306 (21%)
Query: 113 NFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+F E ++G GGFG+V++ DG ++R+ + +REV+ ++ H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV-----KYNNEKAEREVKALAKLDHVNI 67
Query: 172 LRLIGFC--------TTPTERLLVYPF-MQNLSVAYRLR--------EIKPGEPVLDWVT 214
+ G C T + L + +N + R + E + W+
Sbjct: 68 VHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 215 RKR-------VAL----GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
++R +AL +G++Y+H + K+IHRD+K +N+ L + + +GDFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGL- 182
Query: 264 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV-TGQRAIDFSRX 322
+ ++ T+ +GT+ +++PE +S+ + D++ G++L EL+ A + S+
Sbjct: 183 -VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF 241
Query: 323 XXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS 382
D I+ +K + +T++Q L PEDRP S
Sbjct: 242 FTDLR----------------DGIISDIFDK-----KEKTLLQKLL---SKKPEDRPNTS 277
Query: 383 EVVRML 388
E++R L
Sbjct: 278 EILRTL 283
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 33/281 (11%)
Query: 117 KNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+ V+G G FG+V G L K VA+K L + F E ++ H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
L G T +++ +M+N S+ LR+ V+ V R G G++YL +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 135
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLS 290
+HRD+ A N+L++ + V DFG+++++ D T + + APE ++
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 291 TGKSSERTDVFGYGIMLLELVT-GQRAI-DFSRXXXXXXXXXXXXXXXXXREKRLDAIVD 348
K + +DV+ YGI++ E+++ G+R D S RL +D
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---------RLPPPMD 243
Query: 349 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+ + Q+ L C Q DRP ++V ML+
Sbjct: 244 CPI----------ALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 33/281 (11%)
Query: 117 KNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+ V+G G FG+V G L K VA+K L + F E ++ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
L G T +++ +M+N S+ LR+ V+ V R G G++YL +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 129
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLS 290
+HRD+ A N+L++ + V DFG+++++ D T + + APE ++
Sbjct: 130 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 291 TGKSSERTDVFGYGIMLLELVT-GQRAI-DFSRXXXXXXXXXXXXXXXXXREKRLDAIVD 348
K + +DV+ YGI++ E+++ G+R D S RL +D
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---------RLPPPMD 237
Query: 349 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+ + Q+ L C Q DRP ++V ML+
Sbjct: 238 CPI----------ALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 119
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 118
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 119
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 118
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 84 VDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEK-NVLGQGGFGKVYRGVLADGTKVAVK 142
VD+ E + F +K+Y L ++F E LG G FGKVY+ + + +A
Sbjct: 11 VDLGTE---NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 143 RLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE 202
++ D +S + E+++++ H N+++L+ ++ F +V + E
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 203 IKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 262
+ E L + V L YLH++ KIIHRD+KA N+L D + + DFG+
Sbjct: 128 L---ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 263 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER-----TDVFGYGIMLLEL 310
+ + R GT +APE + S +R DV+ GI L+E+
Sbjct: 182 SA-KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 120 LGQGGFGKVY--RGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMI---SVAVHRNLLR 173
+G+G +GKV+ R + G VA+KR+ G + REV ++ H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 174 LIGFCTTP-----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 228
L CT T+ LV+ + Y + +PG P T K + RGL++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT---ETIKDMMFQLLRGLDF 135
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEY 288
LH H +++HRD+K N+L+ + + DFGLA++ + T V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 289 LSTGKSSERTDVFGYGIMLLEL 310
L + D++ G + E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEM 212
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 119
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 120 LGQGGFGKVY--RGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMI---SVAVHRNLLR 173
+G+G +GKV+ R + G VA+KR+ G + REV ++ H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 174 LIGFCTTP-----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 228
L CT T+ LV+ + Y + +PG P T K + RGL++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT---ETIKDMMFQLLRGLDF 135
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEY 288
LH H +++HRD+K N+L+ + + DFGLA++ + T V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEV 190
Query: 289 LSTGKSSERTDVFGYGIMLLEL 310
L + D++ G + E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEM 212
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 126
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 120 LGQGGFGKVY--RGVLADGTKVAVKRL-TDFESPGGDAAFQREVEMI---SVAVHRNLLR 173
+G+G +GKV+ R + G VA+KR+ G + REV ++ H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 174 LIGFCTTP-----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 228
L CT T+ LV+ + Y + +PG P T K + RGL++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT---ETIKDMMFQLLRGLDF 135
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEY 288
LH H +++HRD+K N+L+ + + DFGLA++ + T V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 289 LSTGKSSERTDVFGYGIMLLEL 310
L + D++ G + E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEM 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 123
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 179
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 33/281 (11%)
Query: 117 KNVLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+ V+G G FG+V G L K VA+K L + F E ++ H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
L G T +++ +M+N S+ LR+ V+ V R G G++YL +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM 150
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLS 290
+HRD+ A N+L++ + V DFG+++++ D T + + APE ++
Sbjct: 151 ---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 291 TGKSSERTDVFGYGIMLLELVT-GQRAI-DFSRXXXXXXXXXXXXXXXXXREKRLDAIVD 348
K + +DV+ YGI++ E+++ G+R D S RL +D
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---------RLPPPMD 258
Query: 349 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLE 389
+ + Q+ L C Q DRP ++V ML+
Sbjct: 259 CPI----------ALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 118 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAA--FQREVEMISVAVHRNLLRL 174
+ LG G FGKV G G KVAVK L + D +RE++ + + H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+TP++ +V M+ +S I K G LD +R+ G++Y H H
Sbjct: 82 YQVISTPSDIFMV---MEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHM 136
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK 293
++HRD+K NVLLD A + DFGL+ ++ G+ + APE +S G+
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPNYAAPEVIS-GR 190
Query: 294 --SSERTDVFGYGIMLLELVTGQRAID 318
+ D++ G++L L+ G D
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFESPGGDAAFQREVE--M 162
+++L ++F +LG+G FGKV+ + A+K L D VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 163 ISVAVHRNLLRLIGFCTTPTER--LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
+S+A L + FCT T+ V ++ + Y ++ D A
Sbjct: 71 LSLAWEHPFLTHM-FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAA 125
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK--LVDVRKTNVTTQVR 278
GL++LH + I++RD+K N+LLD+D + DFG+ K ++ KTN
Sbjct: 126 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC--- 179
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
GT +IAPE L K + D + +G++L E++ GQ
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 126
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 109 LATDNFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRL--TDFESPGGDAAFQREVEMIS 164
L N+ +G+G F KV R +L G +VAVK + T S F REV ++
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMK 61
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVA 219
V H N+++L F TE+ L Y + E G V D++ +++ A
Sbjct: 62 VLNHPNIVKL--FEVIETEKTL-----------YLVMEYASGGEVFDYLVAHGWMKEKEA 108
Query: 220 LGAARGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR 278
R + ++C+ K I+HRD+KA N+LLD D + DFG + + N
Sbjct: 109 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFC 166
Query: 279 GTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
G+ + APE K DV+ G++L LV+G D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 119 VLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
V+G G FG+V G L K VA+K L + F E ++ H N++ L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G T ++V FM+N ++ LR+ V+ V R G A G+ YL +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLADM-- 164
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG--HIAPEYLSTG 292
+HRD+ A N+L++ + V DFGL+++++ V T G + APE +
Sbjct: 165 -GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 293 KSSERTDVFGYGIMLLELVT-GQR 315
K + +DV+ YGI++ E+++ G+R
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGER 247
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 55/280 (19%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMISVAVHRNLLRLIGF 177
LG G FG+V+ TKVAVK + PG + AF E ++ H L++L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM----KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 178 CTTPTERLLVYPFMQNLSVAYRLRE----IKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
T ++ FM S+ L+ +P ++D+ + A G+ ++ +
Sbjct: 246 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQR- 297
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK 293
IHRD++AAN+L+ + DFGLA++ + + APE ++ G
Sbjct: 298 --NYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGS 345
Query: 294 SSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNK 353
+ ++DV+ +GI+L+E+VT R I + + V R L +
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGR-IPYPGMS--------------------NPEVIRALER 384
Query: 354 NYNIQEVET----MIQVALLCTQASPEDRPAMSEVVRMLE 389
Y + E + + + C + PE+RP + +L+
Sbjct: 385 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 120 LGQGGFGKVYRGVLA-DGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V + G KVA+K+L+ F+S RE+ ++ H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD- 90
Query: 178 CTTPTERL-------LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
TP L LV PFMQ + ++ +K E + ++ + + +GL+Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQ--TDLQKIMGLKFSEEKIQYLVYQML-----KGLKYIH 143
Query: 231 EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YL 289
+ ++HRD+K N+ ++ED E + DFGLA+ D T T + APE L
Sbjct: 144 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEVIL 196
Query: 290 STGKSSERTDVFGYGIMLLELVTGQ 314
S ++ D++ G ++ E++TG+
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 33/209 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAA-FQREVEMISVAVHRNLLRLIG 176
+LG+G FG+V + + AVK + + D + REVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA-LGAAR-------GLE 227
+ +++ S Y + E+ G + D + RKR + AAR G+
Sbjct: 87 -----------FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 228 YLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
Y+H+H I+HRD+K N+LL ++D + + DFGL+ + T + ++ GT +I
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYI 190
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTG 313
APE L G E+ DV+ G++L L++G
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL-----ADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ +N LG G FGKV D KVAVK L A E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 162 MIS-VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPG----------EPVL 210
++S + H N++ L+G CT L++ + + LR +P P
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 211 DWVTRKRVALGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVD 267
+R + + A+G+ +L + IHRDV A NVLL A +GDFGLA+ +++
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 268 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
V R + +APE + + ++DV+ YGI+L E+ +
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 117/275 (42%), Gaps = 22/275 (8%)
Query: 113 NFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHR 169
NF + +G+G F +VYR L DG VA+K++ F+ A +E++++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++ E +V ++ ++ K + ++ T + + LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H +++HRD+K ANV + +GD GL + KT + GT +++PE +
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERI 208
Query: 290 STGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDR 349
+ ++D++ G +L E+ Q + K+++
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC------------KKIEQCDYP 256
Query: 350 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEV 384
L ++ +E+ ++ +C PE RP ++ V
Sbjct: 257 PLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 33/209 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAA-FQREVEMISVAVHRNLLRLIG 176
+LG+G FG+V + + AVK + + D + REVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA-LGAAR-------GLE 227
+ +++ S Y + E+ G + D + RKR + AAR G+
Sbjct: 87 -----------FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 228 YLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
Y+H+H I+HRD+K N+LL ++D + + DFGL+ + T + ++ GT +I
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYI 190
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTG 313
APE L G E+ DV+ G++L L++G
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 33/209 (15%)
Query: 119 VLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAA-FQREVEMISVAVHRNLLRLIG 176
+LG+G FG+V + + AVK + + D + REVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA-LGAAR-------GLE 227
+ +++ S Y + E+ G + D + RKR + AAR G+
Sbjct: 87 -----------FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 228 YLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
Y+H+H I+HRD+K N+LL ++D + + DFGL+ + T + ++ GT +I
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYI 190
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTG 313
APE L G E+ DV+ G++L L++G
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 113 NFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRL--TDFESPGGDAAFQREVEMISVAVH 168
N+ +G+G F KV R +L G +VAVK + T S F REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAA 223
N+++L F TE+ L Y + E G V D++ +++ A
Sbjct: 73 PNIVKL--FEVIETEKTL-----------YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 224 RGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
R + ++C+ K I+HRD+KA N+LLD D + DFG + + N G+
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPP 177
Query: 283 HIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
+ APE K DV+ G++L LV+G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 19/229 (8%)
Query: 94 IAFGQLKRYSWRELQLATDN-FSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPG 151
I F + ++ W E Q T N F + VLG+GGFG+V V A G A K+L
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 152 --GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEP 208
G+A E +++ R ++ L T LV M + + + + + G P
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 209 VLDWVTRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
R AA GLE LH +I++RD+K N+LLD+ + D GLA
Sbjct: 285 ------EARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA-- 333
Query: 266 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
V V + GT+G++APE + + + D + G +L E++ GQ
Sbjct: 334 VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 113 NFSEKNVLGQGGFGKVY--RGVLADGTKVAVKRL--TDFESPGGDAAFQREVEMISVAVH 168
N+ +G+G F KV R +L G +VAVK + T S F REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAA 223
N+++L F TE+ L Y + E G V D++ +++ A
Sbjct: 73 PNIVKL--FEVIETEKTL-----------YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 224 RGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
R + ++C+ K I+HRD+KA N+LLD D + DFG + + N G+
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPP 177
Query: 283 HIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
+ APE K DV+ G++L LV+G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 46/224 (20%)
Query: 111 TDNFSEKNVLGQGGFGKVY---------RGVLADGTKVAVKRLTDFESPGGDAAFQREVE 161
+D + + VLG+G FG+V + +K VK+ TD ES REV+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES------LLREVQ 78
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD-WVTRKRVA- 219
++ H N+ +L Y F ++ Y + E+ G + D ++RKR +
Sbjct: 79 LLKQLDHPNIXKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
Query: 220 LGAAR-------GLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKLVDVR 269
+ AAR G+ Y H++ KI+HRD+K N+LL+ +D + DFGL+ +
Sbjct: 126 VDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
K GT +IAPE L G E+ DV+ G++L L++G
Sbjct: 183 KK--XKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 119 VLGQGGFGKVYRGVLADGTK----VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
V+G G FG+V G L K VA+K L + F E ++ H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCN 234
G T ++V +M+N S+ L++ V+ V R G + G++YL +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMKYLSDM-- 143
Query: 235 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLSTG 292
+HRD+ A N+L++ + V DFGL++++ D T + + APE ++
Sbjct: 144 -GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 293 KSSERTDVFGYGIMLLELVT-GQRA 316
K + +DV+ YGI++ E+V+ G+R
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 28/210 (13%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G +G+V+RG G VAVK S + ++ RE E+ + + H N+L I
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF----SSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 178 CTTP---TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH---- 230
T + +L + + Y ++ LD V+ R+ L A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 231 -EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL--VDVRKTNVTTQVR-GTMGHIAP 286
P I HRD+K+ N+L+ ++ + + D GLA + + +V R GT ++AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 287 EYLSTG------KSSERTDVFGYGIMLLEL 310
E L S +R D++ +G++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 119 VLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNLLRLIG- 176
++G G +G+VY+G ++A ++ D + + ++E+ M+ + HRN+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 177 -FCTTPT----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
P + LV F SV ++ K +W+ + RGL +LH+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQ 147
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST 291
H K+IHRD+K NVLL E+ E + DFG++ +D R GT +APE ++
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD-RTVGRRNTFIGTPYWMAPEVIAC 203
Query: 292 GKSSE-----RTDVFGYGIMLLELVTG 313
++ + ++D++ GI +E+ G
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 19/229 (8%)
Query: 94 IAFGQLKRYSWRELQLATDN-FSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPG 151
I F + ++ W E Q T N F + VLG+GGFG+V V A G A K+L
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 152 --GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEP 208
G+A E +++ R ++ L T LV M + + + + + G P
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 209 VLDWVTRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
R AA GLE LH +I++RD+K N+LLD+ + D GLA
Sbjct: 285 ------EARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA-- 333
Query: 266 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
V V + GT+G++APE + + + D + G +L E++ GQ
Sbjct: 334 VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 28/217 (12%)
Query: 113 NFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRL--TDFESPGGDAAFQREVEMISVAVH 168
N+ +G+G F KV R +L G +VAV+ + T S F REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAA 223
N+++L F TE+ L Y + E G V D++ +++ A
Sbjct: 73 PNIVKL--FEVIETEKTL-----------YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 224 RGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
R + ++C+ K I+HRD+KA N+LLD D + DFG + + N + G+
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDEFCGSPP 177
Query: 283 HIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
+ APE K DV+ G++L LV+G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G +G+V+RG G VAVK S + ++ RE E+ + + H N+L I
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF----SSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 178 CTTP---TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH---- 230
T + +L + + Y ++ LD V+ R+ L A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 231 -EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN---VTTQVR-GTMGHIA 285
P I HRD+K+ N+L+ ++ + + D GLA ++ + TN V R GT ++A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 286 PEYLSTG------KSSERTDVFGYGIMLLEL 310
PE L S +R D++ +G++L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 25/226 (11%)
Query: 97 GQLKRYSWRELQLATDN---FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGD 153
G LK EL D FS+ +G G FG VY ++V + + +
Sbjct: 36 GSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN 95
Query: 154 AAFQ---REVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEP 208
+Q +EV + H N ++ G LV + L A L E+ KP
Sbjct: 96 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC--LGSASDLLEVHKKP--- 150
Query: 209 VLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 268
L V V GA +GL YLH H +IHRDVKA N+LL E +GDFG A ++
Sbjct: 151 -LQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206
Query: 269 RKTNVTTQVRGTMGHIAPEY---LSTGKSSERTDVFGYGIMLLELV 311
V GT +APE + G+ + DV+ GI +EL
Sbjct: 207 ANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 113/222 (50%), Gaps = 28/222 (12%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAAFQREVEMIS 164
E D ++ VLG+G +G VY G L++ ++A+K + + +S E+ +
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHK 74
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNL---SVAYRLRE----IKPGEPVLDWVTRKR 217
H+N+++ +G + +E + FM+ + S++ LR +K E + + T++
Sbjct: 75 HLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 131
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV--VGDFGLAK-LVDVRKTNVT 274
+ GL+YLH++ +I+HRD+K NVL++ + V + DFG +K L + T
Sbjct: 132 L-----EGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP--CT 180
Query: 275 TQVRGTMGHIAPEYLSTGKS--SERTDVFGYGIMLLELVTGQ 314
GT+ ++APE + G + D++ G ++E+ TG+
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAA--FQREVEMISVAVHR 169
N+ LG+G FGKV G KVA+K + D +RE+ + + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++++L + E ++V + N Y ++ K E +R +EY
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 129
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H KI+HRD+K N+LLDE + DFGL+ + + N G+ + APE +
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVI 184
Query: 290 STGK--SSERTDVFGYGIMLLELVTGQRAID 318
S GK + DV+ G++L ++ + D
Sbjct: 185 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 121
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 177
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL-----ADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ +N LG G FGKV D KVAVK L A E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 162 MIS-VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLR-------EIKPGEPVLDWV 213
++S + H N++ L+G CT L++ + + LR + + G P L+
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELR 160
Query: 214 TRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTN 272
+ A+G+ +L + IHRDV A NVLL A +GDFGLA+ +++
Sbjct: 161 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
V R + +APE + + ++DV+ YGI+L E+ +
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAA--FQREVEMISVAVHR 169
N+ LG+G FGKV G KVA+K + D +RE+ + + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++++L + E ++V + N Y ++ K E +R +EY
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 119
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H KI+HRD+K N+LLDE + DFGL+ + + N G+ + APE +
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVI 174
Query: 290 STGK--SSERTDVFGYGIMLLELVTGQRAID 318
S GK + DV+ G++L ++ + D
Sbjct: 175 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAA--FQREVEMISVAVHR 169
N+ LG+G FGKV G KVA+K + D +RE+ + + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++++L + E ++V + N Y ++ K E +R +EY
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 128
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H KI+HRD+K N+LLDE + DFGL+ + + N G+ + APE +
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVI 183
Query: 290 STGK--SSERTDVFGYGIMLLELVTGQRAID 318
S GK + DV+ G++L ++ + D
Sbjct: 184 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL-----ADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ +N LG G FGKV D KVAVK L A E++
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 162 MIS-VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLR-------EIKPGEPVLDWV 213
++S + H N++ L+G CT L++ + + LR + + G P L+
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELR 152
Query: 214 TRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTN 272
+ A+G+ +L + IHRDV A NVLL A +GDFGLA+ +++
Sbjct: 153 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
V R + +APE + + ++DV+ YGI+L E+ +
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 118
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 113/222 (50%), Gaps = 28/222 (12%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAAFQREVEMIS 164
E D ++ VLG+G +G VY G L++ ++A+K + + +S E+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHK 60
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNL---SVAYRLRE----IKPGEPVLDWVTRKR 217
H+N+++ +G + +E + FM+ + S++ LR +K E + + T++
Sbjct: 61 HLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 117
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV--VGDFGLAK-LVDVRKTNVT 274
+ GL+YLH++ +I+HRD+K NVL++ + V + DFG +K L + T
Sbjct: 118 L-----EGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP--CT 166
Query: 275 TQVRGTMGHIAPEYLSTGKS--SERTDVFGYGIMLLELVTGQ 314
GT+ ++APE + G + D++ G ++E+ TG+
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 113 NFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRL--TDFESPGGDAAFQREVEMISVAVH 168
N+ +G+G F KV R +L G +VAVK + T S F REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAA 223
N+++L F TE+ L Y + E G V D++ +++ A
Sbjct: 73 PNIVKL--FEVIETEKTL-----------YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 224 RGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
R + ++C+ K I+HRD+KA N+LLD D + DFG + + N G
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDAFCGAPP 177
Query: 283 HIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
+ APE K DV+ G++L LV+G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQ---REVEMISVAVHRN 170
FS+ +G G FG VY ++V + + + +Q +EV + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI--KPGEPVLDWVTRKRVALGAARGLEY 228
++ G LV + L A L E+ KP L V V GA +GL Y
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--LGSASDLLEVHKKP----LQEVEIAAVTHGALQGLAY 130
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEY 288
LH H +IHRDVKA N+LL E +GDFG A ++ V GT +APE
Sbjct: 131 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEV 182
Query: 289 ---LSTGKSSERTDVFGYGIMLLELV 311
+ G+ + DV+ GI +EL
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 118
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 120
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE L
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G +G+V+RG G VAVK + + + ++ RE E+ + + H N+L I
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIAS 99
Query: 178 CTTP---TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH---- 230
T + +L + + Y ++ LD V+ R+ L A GL +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 231 -EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL--VDVRKTNVTTQVR-GTMGHIAP 286
P I HRD+K+ N+L+ ++ + + D GLA + + +V R GT ++AP
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 287 EYLSTG------KSSERTDVFGYGIMLLEL 310
E L S +R D++ +G++L E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 113 NFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAA--FQREVEMISVAVHR 169
N+ LG+G FGKV G KVA+K + D +RE+ + + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++++L + E ++V + N Y ++ K E +R +EY
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 123
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H KI+HRD+K N+LLDE + DFGL+ + + N G+ + APE +
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVI 178
Query: 290 STGK--SSERTDVFGYGIMLLELVTGQRAID 318
S GK + DV+ G++L ++ + D
Sbjct: 179 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+ ++ D E+ G + RE+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 119
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+ ++ D E+ G + RE+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ F+ + G P+ K +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 118
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 118 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAA--FQREVEMISVAVHRNLLRL 174
+ LG G FGKV G G KVAVK L + D +RE++ + + H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK-RVALGAARGL------- 226
+TPT+ +V ++ G + D++ + RV AR L
Sbjct: 77 YQVISTPTDFFMVMEYVS-------------GGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 227 -EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIA 285
+Y H H ++HRD+K NVLLD A + DFGL+ ++ + T+ G+ + A
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC--GSPNYAA 178
Query: 286 PEYLSTGK--SSERTDVFGYGIMLLELVTGQRAID 318
PE +S G+ + D++ G++L L+ G D
Sbjct: 179 PEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 34/229 (14%)
Query: 105 RELQLATDNFSEKNV-LGQGGFGKVYRGVLADGTK---VAVKRLTDFESPGGDAAFQREV 160
++L L DN ++ LG G FG V +GV K VA+K L RE
Sbjct: 328 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 387
Query: 161 EMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL 220
+++ + ++RLIG C E L++ + E+ G P+ ++ KR +
Sbjct: 388 QIMHQLDNPYIVRLIGVCQA--EALML------------VMEMAGGGPLHKFLVGKREEI 433
Query: 221 GAAR----------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+ G++YL E +HR++ A NVLL A + DFGL+K +
Sbjct: 434 PVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
Query: 271 TNVTTQVRG--TMGHIAPEYLSTGKSSERTDVFGYGIMLLE-LVTGQRA 316
+ T + G + APE ++ K S R+DV+ YG+ + E L GQ+
Sbjct: 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 113 NFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRL--TDFESPGGDAAFQREVEMISVAVH 168
N+ +G+G F KV R +L G +VAV+ + T S F REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAA 223
N+++L F TE+ L Y + E G V D++ +++ A
Sbjct: 73 PNIVKL--FEVIETEKTL-----------YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 224 RGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
R + ++C+ K I+HRD+KA N+LLD D + DFG + + N G+
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPP 177
Query: 283 HIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
+ APE K DV+ G++L LV+G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 118 NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAA--FQREVEMISVAVHRNLLRL 174
+ LG G FGKV G G KVAVK L + D +RE++ + + H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 175 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK-RVALGAARGL------- 226
+TPT+ +V ++ G + D++ + RV AR L
Sbjct: 77 YQVISTPTDFFMVMEYVS-------------GGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 227 -EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIA 285
+Y H H ++HRD+K NVLLD A + DFGL+ ++ G+ + A
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPNYAA 178
Query: 286 PEYLSTGK--SSERTDVFGYGIMLLELVTGQRAID 318
PE +S G+ + D++ G++L L+ G D
Sbjct: 179 PEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 114 FSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR 169
F K LG G F +V VLA+ G AVK + G +++ + E+ ++ H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N++ L +P LV + + R+ E K D T R L A + YL
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDASTLIRQVLDA---VYYL 136
Query: 230 HEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAP 286
H I+HRD+K N+L DE+ + ++ DFGL+K+ K +V + GT G++AP
Sbjct: 137 HRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTACGTPGYVAP 191
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTG 313
E L+ S+ D + G++ L+ G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 120 LGQGGFGKVYRGVLA-DGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V V G KVA+K+L F+S RE+ ++ H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD- 91
Query: 178 CTTPTERL-------LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
TP E L LV PFM + ++ K GE + ++ + + +GL Y+H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQML-----KGLRYIH 145
Query: 231 EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YL 289
IIHRD+K N+ ++ED E + DFGLA+ D T + APE L
Sbjct: 146 AAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVIL 198
Query: 290 STGKSSERTDVFGYGIMLLELVTGQ 314
+ + ++ D++ G ++ E++TG+
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 113 NFSEKNVLGQGGFGKVY--RGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHR 169
N+ +G+G F KV R +L G +VA+K + + +P REV ++ + H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAAR 224
N+++L F TE+ L Y + E G V D++ +++ A R
Sbjct: 72 NIVKL--FEVIETEKTL-----------YLIMEYASGGEVFDYLVAHGRMKEKEARSKFR 118
Query: 225 GLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGH 283
+ ++C+ K I+HRD+KA N+LLD D + DFG + V T G+ +
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPY 176
Query: 284 IAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
APE K DV+ G++L LV+G D
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 120 LGQGGFGKVYRGVLA-DGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V + G KVA+K+L+ F+S RE+ ++ H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD- 108
Query: 178 CTTPTERL-------LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
TP L LV PFMQ + ++ ++ E + ++ + + +GL+Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQ--TDLQKIMGMEFSEEKIQYLVYQML-----KGLKYIH 161
Query: 231 EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YL 289
+ ++HRD+K N+ ++ED E + DFGLA+ D T T + APE L
Sbjct: 162 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEVIL 214
Query: 290 STGKSSERTDVFGYGIMLLELVTGQ 314
S ++ D++ G ++ E++TG+
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VA+K + E + F E +++ H L++L G CT
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL--GAARGLEYLHEHCNPKI 237
++ +M N + LRE++ + T++ + + +EYL + +
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE---SKQF 125
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A N L+++ V DFGL++ V + + + + PE L K S +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 298 TDVFGYGIMLLELVT 312
+D++ +G+++ E+ +
Sbjct: 186 SDIWAFGVLMWEIYS 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAVHR 169
+NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
N+++L+ T + LV+ + + G P+ K +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLAFC 118
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H H +++HRD+K N+L++ + + DFGLA+ V T +V T+ + APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 290 STGK-SSERTDVFGYGIMLLELVT 312
K S D++ G + E+VT
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VA+K + E + F E +++ H L++L G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL--GAARGLEYLHEHCNPKI 237
++ +M N + LRE++ + T++ + + +EYL + +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A N L+++ V DFGL++ V + + + + PE L K S +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 298 TDVFGYGIMLLELVT 312
+D++ +G+++ E+ +
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ F+ + G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 12/211 (5%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTD--FESPGGDAAFQREVEMISVAVH 168
++F N+LG+G F VYR + G +VA+K + G Q EV++ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRE-IKPGEPVLDWVTRKRVALGAARGLE 227
++L L + LV N + L+ +KP + G+
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP----FSENEARHFMHQIITGML 126
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
YLH H I+HRD+ +N+LL + + DFGLA + + T + GT +I+PE
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPE 182
Query: 288 YLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ +DV+ G M L+ G+ D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VA+K + E + F E +++ H L++L G CT
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL--GAARGLEYLHEHCNPKI 237
++ +M N + LRE++ + T++ + + +EYL + +
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE---SKQF 121
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A N L+++ V DFGL++ V + + + + PE L K S +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 298 TDVFGYGIMLLELVT 312
+D++ +G+++ E+ +
Sbjct: 182 SDIWAFGVLMWEIYS 196
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VA+K + E + F E +++ H L++L G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL--GAARGLEYLHEHCNPKI 237
++ +M N + LRE++ + T++ + + +EYL + +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI---APEYLSTGKS 294
+HRD+ A N L+++ V DFGL++ V + T RG+ + PE L K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 295 SERTDVFGYGIMLLELVT 312
S ++D++ +G+++ E+ +
Sbjct: 184 SSKSDIWAFGVLMWEIYS 201
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 117 KNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL---- 171
K LG GGFG V R + D G +VA+K+ SP + E++++ H N+
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 172 -----LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
L+ + P LL + + + L + + + + R ++ + L
Sbjct: 79 EVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 134
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVG---DFGLAKLVDVRKTNVTTQVRGTMGH 283
YLHE+ +IIHRD+K N++L + ++ D G AK +D + + T+ GT+ +
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQY 189
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 316
+APE L K + D + +G + E +TG R
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 117 KNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL---- 171
K LG GGFG V R + D G +VA+K+ SP + E++++ H N+
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 172 -----LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
L+ + P LL + + + L + + + + R ++ + L
Sbjct: 80 EVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 135
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVG---DFGLAKLVDVRKTNVTTQVRGTMGH 283
YLHE+ +IIHRD+K N++L + ++ D G AK +D + + T+ GT+ +
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQY 190
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 316
+APE L K + D + +G + E +TG R
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VA+K + E + F E +++ H L++L G CT
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL--GAARGLEYLHEHCNPKI 237
++ +M N + LRE++ + T++ + + +EYL + +
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE---SKQF 132
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A N L+++ V DFGL++ V + + + + PE L K S +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 298 TDVFGYGIMLLELVT 312
+D++ +G+++ E+ +
Sbjct: 193 SDIWAFGVLMWEIYS 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+GQG G VY + +A G +VA++++ + P + E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
E +V ++ S+ + E E + V R+ + LE+LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRE-----CLQALEFLHSN---QVI 138
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT 298
HRD+K+ N+LL D + DFG + ++ +T V GT +APE ++ +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 299 DVFGYGIMLLELVTGQ 314
D++ GIM +E++ G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 113 NFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHR 169
N+ +G+G F KV R +L G +VA+K + + +P REV ++ + H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAAR 224
N+++L F TE+ L Y + E G V D++ +++ A R
Sbjct: 75 NIVKL--FEVIETEKTL-----------YLIMEYASGGEVFDYLVAHGRMKEKEARSKFR 121
Query: 225 GLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGH 283
+ ++C+ K I+HRD+KA N+LLD D + DFG + V G +
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDAFCGAPPY 179
Query: 284 IAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
APE K DV+ G++L LV+G D
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISV 165
L+ A+D F E VLGQG FG+V + A D A+K++ E + EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLAS 58
Query: 166 AVHRNLLRLIGFCTTPTERLLVYPF--MQNLSVAYRLREIKPGEPVLDWVTRK------- 216
H+ ++R + R V P ++ S + E + D + +
Sbjct: 59 LNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD 116
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVR 269
R+ L Y+H IIHRD+K N+ +DE +GDFGLAK V D+
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 270 K----------TNVTTQVRGTMGHIAPEYLS-TGKSSERTDVFGYGIMLLELV 311
K N+T+ + GT ++A E L TG +E+ D++ GI+ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 32/212 (15%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G +G+V+RG L G VAVK + + + ++ RE E+ + + H N+L I
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRD----EQSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 178 CTTP----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--- 230
T T+ L+ + ++ S+ Y + + EP L R+A+ AA GL +LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSL-YDFLQRQTLEPHL----ALRLAVSAACGLAHLHVEI 125
Query: 231 --EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL----VDVRKTNVTTQVRGTMGHI 284
P I HRD K+ NVL+ + + + D GLA + D +V GT ++
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYM 184
Query: 285 APEYLSTG------KSSERTDVFGYGIMLLEL 310
APE L +S + TD++ +G++L E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 128/315 (40%), Gaps = 25/315 (7%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAF-QREVEMISVAV 167
+ + + ++G+G +G V + D G VA+K+ + + RE++++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H NL+ L+ C LV+ F+ + ++ L G LD+ ++ G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNG---LDYQVVQKYLFQIINGIG 138
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H IIHRD+K N+L+ + + DFG A+ + +V T + APE
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPE 194
Query: 288 YL-STGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREK----- 341
L K + DV+ G ++ E+ G+ R +
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254
Query: 342 -------RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR--MLEGEG 392
RL I +R + + E +I +A C P+ RP +E++ + +G
Sbjct: 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG 314
Query: 393 LAERWEEWQHVEVTR 407
AER+ + ++V +
Sbjct: 315 FAERFSQELQLKVQK 329
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 21/216 (9%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLA--DGT--KVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
F+ +LG+G FG V L DG+ KVAVK L D + F RE +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 168 HRNLLRLIGFCTTPTER------LLVYPFMQNLSVAYRLREIKPGE-PV-LDWVTRKRVA 219
H ++ +L+G + +++ PFM++ + L + GE P L T R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 220 LGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV---DVRKTNVTTQ 276
+ A G+EYL IHRD+ A N +L ED V DFGL++ + D + ++
Sbjct: 144 VDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ + +A E L+ + +DV+ +G+ + E++T
Sbjct: 201 L--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 113 NFSEKNVLGQGGFGKV--YRGVLADGTKVAVKRL--TDFESPGGDAAFQREVEMISVAVH 168
N+ +G+G F KV R +L G +VAVK + T S F REV + V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNH 72
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT-----RKRVALGAA 223
N+++L F TE+ L Y + E G V D++ +++ A
Sbjct: 73 PNIVKL--FEVIETEKTL-----------YLVXEYASGGEVFDYLVAHGRXKEKEARAKF 119
Query: 224 RGLEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
R + ++C+ K I+HRD+KA N+LLD D + DFG + + N G
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDAFCGAPP 177
Query: 283 HIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAID 318
+ APE K DV+ G++L LV+G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VA+K + E + F E +++ H L++L G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL--GAARGLEYLHEHCNPKI 237
++ +M N + LRE++ + T++ + + +EYL + +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A N L+++ V DFGL++ V + + + + PE L K S +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 298 TDVFGYGIMLLELVT 312
+D++ +G+++ E+ +
Sbjct: 202 SDIWAFGVLMWEIYS 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V G VA+K + E + F E +++ H L++L G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVAL--GAARGLEYLHEHCNPKI 237
++ +M N + LRE++ + T++ + + +EYL + +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
+HRD+ A N L+++ V DFGL++ V + + + + PE L K S +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 298 TDVFGYGIMLLELVT 312
+D++ +G+++ E+ +
Sbjct: 202 SDIWAFGVLMWEIYS 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
++L D+F + + LG G G V++ V ++L E I A
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 167 VHRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK------- 216
+ ++R ++ C +P F + ++ + + G LD V +K
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQ 104
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTN 272
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----S 158
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
+ GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
++L D+F + + LG G G V++ V ++L E I A
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 167 VHRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK------- 216
+ ++R ++ C +P F + ++ + + G LD V +K
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQ 104
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTN 272
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----S 158
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
+ GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 119 VLGQ-GGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
++G+ G FGKVY+ + + +A ++ D +S + E+++++ H N+++L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
++ F +V + E+ E L + V L YLH++ KI
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KI 129
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR----GTMGHIAPEYLSTGK 293
IHRD+KA N+L D + + DFG V + T Q R GT +APE +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFG----VSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 294 SSER-----TDVFGYGIMLLEL 310
S +R DV+ GI L+E+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
++L D+F + + LG G G V++ V ++L E I A
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 167 VHRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK------- 216
+ ++R ++ C +P F + ++ + + G LD V +K
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQ 104
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTN 272
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----S 158
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
+ GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISV 165
L+ A+D F E VLGQG FG+V + A D A+K++ E + EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLAS 58
Query: 166 AVHRNLLRLIGFCTTPTERLLVYPF--MQNLSVAYRLREIKPGEPVLDWVTRK------- 216
H+ ++R + R V P ++ S + E + D + +
Sbjct: 59 LNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVR 269
R+ L Y+H IIHRD+K N+ +DE +GDFGLAK V D+
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 270 K----------TNVTTQVRGTMGHIAPEYLS-TGKSSERTDVFGYGIMLLELV 311
K N+T+ + GT ++A E L TG +E+ D++ GI+ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
++L D+F + + LG G G V++ V ++L E I A
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 167 VHRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK------- 216
+ ++R ++ C +P F + ++ + + G LD V +K
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQ 104
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTN 272
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----S 158
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
+ GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
++L D+F + + LG G G V++ V ++L E I A
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPA 46
Query: 167 VHRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK------- 216
+ ++R ++ C +P F + ++ + + G LD V +K
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQ 104
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTN 272
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----S 158
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
+ GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLL 172
F++ +G+G FG+V++G+ +V ++ D E + Q+E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
+ G ++ ++ ++ S LR E + + ++ + +GL+YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL-----KGLDYLHSE 139
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG 292
K IHRD+KAANVLL E + + DFG+A + + T V GT +APE +
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQS 195
Query: 293 KSSERTDVFGYGIMLLELVTGQ 314
+ D++ GI +EL G+
Sbjct: 196 AYDSKADIWSLGITAIELAKGE 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 30/232 (12%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL-----ADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ +N LG G FGKV D KVAVK L A E++
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 162 MIS-VAVHRNLLRLIGFCTTPTERLLV---------YPFMQNLSVAYRLREIKPGEPV-- 209
++S + H N++ L+G CT L++ F++ + A + PG+
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 210 LDWVTRKRVAL--------GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG 261
LD + + L A+G+ +L + IHRDV A NVLL A +GDFG
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 262 LAK-LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
LA+ +++ V R + +APE + + ++DV+ YGI+L E+ +
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 36/224 (16%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
+L D+F + + LG G G V++ V ++L E I A+
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPAI 66
Query: 168 HRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK-------- 216
++R ++ C +P F + ++ + + G LD V +K
Sbjct: 67 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQI 124
Query: 217 --RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNV 273
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D ++
Sbjct: 125 LGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SM 178
Query: 274 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 179 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-----RGVLADGTKVAVKRLTDFESPGGDAAFQREVEM 162
+ D+F LG+G FG VY + KV K + E G + +RE+E+
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEHQLRREIEI 68
Query: 163 ISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEPVLDWVTRKRVALG 221
S H N+LR+ + +R +Y ++ +E+ K G D
Sbjct: 69 QSHLRHPNILRMYNYFH---DRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEE 123
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGT 280
A L Y HE K+IHRD+K N+L+ E + DFG + +R+ + GT
Sbjct: 124 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GT 176
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ ++ PE + E+ D++ G++ E + G D
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-----RGVLADGTKVAVKRLTDFESPGGDAAFQREVEM 162
+ D+F LG+G FG VY + KV K + E G + +RE+E+
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEHQLRREIEI 67
Query: 163 ISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEPVLDWVTRKRVALG 221
S H N+LR+ + +R +Y ++ +E+ K G D
Sbjct: 68 QSHLRHPNILRMYNYFH---DRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEE 122
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGT 280
A L Y HE K+IHRD+K N+L+ E + DFG + +R+ + GT
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GT 175
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ ++ PE + E+ D++ G++ E + G D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 36/224 (16%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
+L D+F + + LG G G V++ V ++L E I A+
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPAI 74
Query: 168 HRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK-------- 216
++R ++ C +P F + ++ + + G LD V +K
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQI 132
Query: 217 --RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNV 273
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D ++
Sbjct: 133 LGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SM 186
Query: 274 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVY-----RGVLADGTKVAVKRLTDFESPGGDAAFQREVEM 162
+ D+F LG+G FG VY + KV K + E G + +RE+E+
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEHQLRREIEI 67
Query: 163 ISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREI-KPGEPVLDWVTRKRVALG 221
S H N+LR+ + +R +Y ++ +E+ K G D
Sbjct: 68 QSHLRHPNILRMYNYFH---DRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEE 122
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGT 280
A L Y HE K+IHRD+K N+L+ E + DFG + +R+ + GT
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GT 175
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ ++ PE + E+ D++ G++ E + G D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 120 LGQGGFGKVYRGV--LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G + VY+G L D VA+K + G REV ++ H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
T LV+ ++ Y + +++ K RGL Y H K+
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQY----LDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKSSE 296
+HRD+K N+L++E E + DFGLA+ + +V T+ + P+ L + S
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYST 180
Query: 297 RTDVFGYGIMLLELVTGQ 314
+ D++G G + E+ TG+
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 112 DNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVH 168
++F +LG+G F V LA + A+K L RE +++S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 169 RNLLRLIGFCTTPTERLLV-YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
++L FC E+L + +N + +R+I D + LE
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALE 151
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGHIAP 286
YLH IIHRD+K N+LL+ED + DFG AK++ K GT +++P
Sbjct: 152 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTG 313
E L+ + + +D++ G ++ +LV G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 26/168 (15%)
Query: 158 REVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
+E+ ++ H N+++L+ P E L Y + E+ PV++ T K
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHL-----------YMVFELVNQGPVMEVPTLKP 133
Query: 218 VALGAAR--------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 269
++ AR G+EYLH KIIHRD+K +N+L+ ED + DFG++
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGK---SSERTDVFGYGIMLLELVTGQ 314
++ V GT +APE LS + S + DV+ G+ L V GQ
Sbjct: 191 DALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+GQG G VY + +A G +VA++++ + P + E+ ++ + N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
E +V ++ S+ + E E + V R+ + LE+LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRE-----CLQALEFLHSN---QVI 139
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT 298
HR++K+ N+LL D + DFG + ++ +T V GT +APE ++ +
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 299 DVFGYGIMLLELVTGQ 314
D++ GIM +E++ G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTK-VAVKRLT----DFESPGGDAAFQREVEMISVAVH 168
+ + + LG+G F VY+ + + VA+K++ G + RE++++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQ-NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N++ L+ + LV+ FM+ +L V IK VL K L +GLE
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETDLEVI-----IKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
YLH+H I+HRD+K N+LLDE+ + DFGLAK QV T + APE
Sbjct: 127 YLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPE 182
Query: 288 YLSTGKS-SERTDVFGYGIMLLELV 311
L + D++ G +L EL+
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 142
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 143 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ +S+ +D++ G ++ +LV G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+GQG G VY + +A G +VA++++ + P + E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
E +V ++ S+ + E E + V R+ + LE+LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRE-----CLQALEFLHSN---QVI 138
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT 298
HRD+K+ N+LL D + DFG + ++ + V GT +APE ++ +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 299 DVFGYGIMLLELVTGQ 314
D++ GIM +E++ G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 36/224 (16%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
+L D+F + + LG G G V++ V ++L E I A+
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPAI 109
Query: 168 HRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK-------- 216
++R ++ C +P F + ++ + + G LD V +K
Sbjct: 110 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQI 167
Query: 217 --RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNV 273
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D ++
Sbjct: 168 LGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SM 221
Query: 274 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
GT +++PE L S ++D++ G+ L+E+ G+ I
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
++++ V+G G FG VY+ L D G VA+K++ G A RE++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 172 LRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAAR 224
+RL F + E+ LV ++ + YR+ R + L + K R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGH 283
L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ + +
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYY 188
Query: 284 IAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
APE + + DV+ G +L EL+ GQ
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+GQG G VY + +A G +VA++++ + P + E+ ++ + N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
E +V ++ S+ + E E + V R+ + LE+LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRE-----CLQALEFLHSN---QVI 139
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT 298
HRD+K+ N+LL D + DFG + ++ + V GT +APE ++ +
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 299 DVFGYGIMLLELVTGQ 314
D++ GIM +E++ G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ +NF + +G+G +G VY+ G VA+K++ D E+ G + RE+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H N+++L+ T + LV+ + + G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
+ H H +++HRD+K N+L++ + + DFGLA+ V +V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 288 YLSTGK-SSERTDVFGYGIMLLELVT 312
L K S D++ G + E+VT
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC 178
+GQG G VY + +A G +VA++++ + P + E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 179 TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKII 238
E +V ++ S+ + E E + V R+ + LE+LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRE-----CLQALEFLHSN---QVI 138
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT 298
HRD+K+ N+LL D + DFG + ++ + V GT +APE ++ +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 299 DVFGYGIMLLELVTGQ 314
D++ GIM +E++ G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 111 TDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFE-SPGGDAAFQREVEMISVAV 167
+D + +LG GG +V+ L D VAVK L D P F+RE + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HRNLLRL--IGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H ++ + G TP L +V ++ ++ LR+I E + V A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADAC 126
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV--TTQVRGTM 281
+ L + H++ IIHRDVK AN+L+ V DFG+A+ + +V T V GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+++PE R+DV+ G +L E++TG+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 217 RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTT 275
++ L + L +L E N KIIHRD+K +N+LLD + DFG++ +LVD + T
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD---SIAKT 183
Query: 276 QVRGTMGHIAPEYLSTGKSSE----RTDVFGYGIMLLELVTGQ 314
+ G ++APE + S + R+DV+ GI L EL TG+
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 142
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 143 H---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 36/221 (16%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
+L D+F + + LG G G V++ V ++L E I A+
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPAI 50
Query: 168 HRNLLR---LIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRK-------- 216
++R ++ C +P F + ++ + + G LD V +K
Sbjct: 51 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQI 108
Query: 217 --RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNV 273
+V++ +GL YL E KI+HRDVK +N+L++ E + DFG++ +L+D +
Sbjct: 109 LGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EM 162
Query: 274 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+ GT +++PE L S ++D++ G+ L+E+ G+
Sbjct: 163 ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 91/215 (42%), Gaps = 12/215 (5%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRLT-DFESPGGDA-AFQREVEMIS 164
+L DNF VLG+G FGKV V G AVK L D D E ++S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 165 VAVHRNLLRLIGFC-TTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
+A + L + C TP V F+ + + +++ + D + A
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEII 134
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGH 283
L +LH+ II+RD+K NVLLD + + DFG+ K + T GT +
Sbjct: 135 SALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDY 190
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
IAPE L D + G++L E++ G +
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 113 NFSEKNVLGQGGFGK-VYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRN 170
+F K+VLG G G VYRG+ D VAVKR+ P + REV+++ + H N
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRIL----PECFSFADREVQLLRESDEHPN 79
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-LG-------- 221
++R FC TE+ + ++ A L+E +V +K A LG
Sbjct: 80 VIRY--FC---TEKDRQFQYIAIELCAATLQE---------YVEQKDFAHLGLEPITLLQ 125
Query: 222 -AARGLEYLHEHCNPKIIHRDVKAANVLLDE-----DFEAVVGDFGLAKLVDVRKTNVT- 274
GL +LH + I+HRD+K N+L+ +A++ DFGL K + V + + +
Sbjct: 126 QTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 275 -TQVRGTMGHIAPEYLSTGKSSERT---DVFGYGIMLLELVT 312
+ V GT G IAPE LS T D+F G + +++
Sbjct: 183 RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 140
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 140
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
++++ V+G G FG VY+ L D G VA+K++ G A RE++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 172 LRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAAR 224
+RL F + E+ LV ++ YR+ R + L + K R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGH 283
L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ + +
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYY 188
Query: 284 IAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
APE + + DV+ G +L EL+ GQ
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 142
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 143 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
++++ V+G G FG VY+ L D G VA+K++ G A RE++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 172 LRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAAR 224
+RL F + E+ LV ++ YR+ R + L + K R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGH 283
L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ + +
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYY 188
Query: 284 IAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
APE + + DV+ G +L EL+ GQ
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 117 KNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+ ++G G G+V G L VA+K L + F E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
RL G T ++V +M+N S+ LR ++ V R G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--- 167
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLS 290
+ +HRD+ A NVL+D + V DFGL++++ D TT + + APE ++
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 291 TGKSSERTDVFGYGIMLLE-LVTGQR 315
S +DV+ +G+++ E L G+R
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 111 TDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFE-SPGGDAAFQREVEMISVAV 167
+D + +LG GG +V+ L D VAVK L D P F+RE + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HRNLLRL--IGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H ++ + G TP L +V ++ ++ LR+I E + V A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADAC 126
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV--TTQVRGTM 281
+ L + H++ IIHRDVK AN+++ V DFG+A+ + +V T V GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+++PE R+DV+ G +L E++TG+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 148
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 149 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 140
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L ++P + + D++T +R AL +
Sbjct: 75 VIRLLDWFERPDSFVLI------------LERMEPVQDLFDFIT-ERGALQEELARSFFW 121
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 178
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 140
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 160
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 161 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 111 TDNFSEKNVLGQGGFGKVYRG-VLADGTKVAVKRL-TDFE-SPGGDAAFQREVEMISVAV 167
+D + +LG GG +V+ L D VAVK L D P F+RE + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HRNLLRL--IGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H ++ + G TP L +V ++ ++ LR+I E + V A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADAC 126
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV--TTQVRGTM 281
+ L + H++ IIHRDVK AN+++ V DFG+A+ + +V T V GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+++PE R+DV+ G +L E++TG+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G +G+V+ G G KVAVK E +A++ RE E+ + H N+L I
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAA 99
Query: 178 ----CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T+ L+ + +N S+ L+ LD + ++A + GL +LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 234 -----NPKIIHRDVKAANVLLDEDFEAVVGDFGLAK--LVDVRKTNVTTQVR-GTMGHIA 285
P I HRD+K+ N+L+ ++ + D GLA + D + ++ R GT ++
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 286 PEYLSTG------KSSERTDVFGYGIMLLEL 310
PE L +S D++ +G++L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 117/245 (47%), Gaps = 44/245 (17%)
Query: 97 GQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDA- 154
G++ R+ R+ +L LG+G +G V++ + G VAVK++ D DA
Sbjct: 1 GRVDRHVLRKYELVKK-------LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQ 53
Query: 155 -AFQREVEMISVAVHRNLLRLIGFCTTPTER--LLVYPFMQ-NLSVAYRLREIKPGEPVL 210
F+ + + ++ H N++ L+ +R LV+ +M+ +L R ++P
Sbjct: 54 RTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEP----- 108
Query: 211 DWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVR 269
V ++ V + ++YLH + ++HRD+K +N+LL+ + V DFGL++ V++R
Sbjct: 109 --VHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163
Query: 270 K-TN------------------VTTQVRGTMGHIAPE-YLSTGKSSERTDVFGYGIMLLE 309
+ TN + T T + APE L + K ++ D++ G +L E
Sbjct: 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGE 223
Query: 310 LVTGQ 314
++ G+
Sbjct: 224 ILCGK 228
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 38/242 (15%)
Query: 97 GQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL---ADGTK---VAVKRLTDFESP 150
Q K+ +E+ L+ F E+ LG+ FGKVY+G L A G + VA+K L D
Sbjct: 13 NQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG 70
Query: 151 GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRL---------- 200
F+ E + + H N++ L+G T +++ + + + L
Sbjct: 71 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 201 -----REIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 255
R +K D+V + A G+EYL H ++H+D+ NVL+ +
Sbjct: 131 STDDDRTVKSALEPPDFV---HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184
Query: 256 VVGDFGLAKLV---DVRKT--NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEL 310
+ D GL + V D K N +R +APE + GK S +D++ YG++L E+
Sbjct: 185 KISDLGLFREVYAADYYKLLGNSLLPIRW----MAPEAIMYGKFSIDSDIWSYGVVLWEV 240
Query: 311 VT 312
+
Sbjct: 241 FS 242
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ +Q+L + +K D + RGL+Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYI 140
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQ----REVEMI 163
+AT + +G G +G VY+ G VA+K + P G+ REV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALL 57
Query: 164 ---SVAVHRNLLRLIGFCTTP-TER----LLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
H N++RL+ C T T+R LV+ + Y + PG P T
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA---ETI 114
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT 275
K + RGL++LH +C I+HRD+K N+L+ + DFGLA++ +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPV 171
Query: 276 QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEL 310
V T+ + APE L + D++ G + E+
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 117 KNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+ ++G G G+V G L VA+K L + F E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
RL G T ++V +M+N S+ LR ++ V R G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYL--- 167
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRKTNVTTQVRGTMGHIAPEYLS 290
+ +HRD+ A NVL+D + V DFGL++++ D TT + + APE ++
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 291 TGKSSERTDVFGYGIMLLE-LVTGQR 315
S +DV+ +G+++ E L G+R
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISV 165
L+ A+D F E VLGQG FG+V + A D A+K++ E + EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVXLLAS 58
Query: 166 AVHRNLLRLIGFCTTPTERLLVYPF--MQNLSVAYRLREIKPGEPVLDWVTRK------- 216
H+ ++R + R V P ++ S + E + D + +
Sbjct: 59 LNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 217 ---RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV----DVR 269
R+ L Y+H IIHR++K N+ +DE +GDFGLAK V D+
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 270 K----------TNVTTQVRGTMGHIAPEYLS-TGKSSERTDVFGYGIMLLELV 311
K N+T+ + GT ++A E L TG +E+ D + GI+ E +
Sbjct: 174 KLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 121 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+F LG+GGFG V+ D A+KR+ REV+ ++ H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 172 LRLIG--FCTTPTERLL-----VYPFMQ-NLSVAYRLREIKPGEPVLDWVTRK---RVAL 220
+R TE+L VY ++Q L L++ G ++ R + L
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT------ 274
A +E+LH ++HRD+K +N+ D VGDFGL +D + T
Sbjct: 126 QIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 275 -----TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
T GT +++PE + S + D+F G++L EL+
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 40/217 (18%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G FG+V+RG G +VAVK + E + ++ RE E+ + H N+L I
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 178 CT----TPTERLLVYPFMQNLSV-AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-- 230
T T+ LV + ++ S+ Y R E ++ ++AL A GL +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHME 125
Query: 231 ---EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-------GT 280
P I HRD+K+ N+L+ ++ + D GLA VR + T + GT
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGT 181
Query: 281 MGHIAPEYLSTG------KSSERTDVFGYGIMLLELV 311
++APE L +S +R D++ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 40/217 (18%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G FG+V+RG G +VAVK + E + ++ RE E+ + H N+L I
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 178 CT----TPTERLLVYPFMQNLSV-AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-- 230
T T+ LV + ++ S+ Y R E ++ ++AL A GL +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHME 120
Query: 231 ---EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-------GT 280
P I HRD+K+ N+L+ ++ + D GLA VR + T + GT
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGT 176
Query: 281 MGHIAPEYLSTG------KSSERTDVFGYGIMLLELV 311
++APE L +S +R D++ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 145
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVA 166
+L D+F + LG G G V + + ++L E P RE++++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIK--PGEPVLDWVTRKRVALGAAR 224
++ G + E + M S+ L+E K P E +V++ R
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE------ILGKVSIAVLR 125
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGTMGH 283
GL YL E +I+HRDVK +N+L++ E + DFG++ +L+D ++ GT +
Sbjct: 126 GLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 179
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 317
+APE L S ++D++ G+ L+EL G+ I
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 40/217 (18%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G FG+V+RG G +VAVK + E + ++ RE E+ + H N+L I
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 178 CT----TPTERLLVYPFMQNLSV-AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-- 230
T T+ LV + ++ S+ Y R E ++ ++AL A GL +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHME 119
Query: 231 ---EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-------GT 280
P I HRD+K+ N+L+ ++ + D GLA VR + T + GT
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGT 175
Query: 281 MGHIAPEYLSTG------KSSERTDVFGYGIMLLELV 311
++APE L +S +R D++ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 40/217 (18%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G FG+V+RG G +VAVK + E + ++ RE E+ + H N+L I
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 178 CT----TPTERLLVYPFMQNLSV-AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-- 230
T T+ LV + ++ S+ Y R E ++ ++AL A GL +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHME 122
Query: 231 ---EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-------GT 280
P I HRD+K+ N+L+ ++ + D GLA VR + T + GT
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGT 178
Query: 281 MGHIAPEYLSTG------KSSERTDVFGYGIMLLELV 311
++APE L +S +R D++ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 119 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 122 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 145 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQ----REVEMI 163
+AT + +G G +G VY+ G VA+K + P G+ REV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALL 57
Query: 164 ---SVAVHRNLLRLIGFCTTP-TER----LLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
H N++RL+ C T T+R LV+ + Y + PG P T
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA---ETI 114
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT 275
K + RGL++LH +C I+HRD+K N+L+ + DFGLA++ +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV 171
Query: 276 QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEL 310
V T+ + APE L + D++ G + E+
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR 169
+ +F K++LG+G +G V G VA+K++ F+ P RE++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV---------AL 220
N++ + + +N + Y ++E+ + L V ++
Sbjct: 70 NIITIFNIQRPDS--------FENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIY 119
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD---VRKTNVTTQV 277
R ++ LH +IHRD+K +N+L++ + + V DFGLA+++D + T Q
Sbjct: 120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 278 RGTMGHI------APE-YLSTGKSSERTDVFGYGIMLLEL 310
G ++ APE L++ K S DV+ G +L EL
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 126 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 141 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 71 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 117
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 174
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 71 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 117
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 174
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 139
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 142 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 145 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 74 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 120
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 177
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 139
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 40/217 (18%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G FG+V+RG G +VAVK + E + ++ RE E+ + H N+L I
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 178 CT----TPTERLLVYPFMQNLSV-AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-- 230
T T+ LV + ++ S+ Y R E ++ ++AL A GL +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHME 145
Query: 231 ---EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-------GT 280
P I HRD+K+ N+L+ ++ + D GLA VR + T + GT
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGT 201
Query: 281 MGHIAPEYLSTG------KSSERTDVFGYGIMLLELV 311
++APE L +S +R D++ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 146
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 147 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 147
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 148 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 138
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 139 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 145
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 145
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 71 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 117
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 174
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGH 283
LEYLH IIHRD+K N+LL+ED + DFG AK++ K GT +
Sbjct: 144 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++PE L+ + + +D++ G ++ +LV G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY--FLYQILRGLKYIH- 145
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQ----REVEMI 163
+AT + +G G +G VY+ G VA+K + P G+ REV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALL 57
Query: 164 ---SVAVHRNLLRLIGFCTTP-TER----LLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
H N++RL+ C T T+R LV+ + Y + PG P T
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA---ETI 114
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT 275
K + RGL++LH +C I+HRD+K N+L+ + DFGLA++ +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LD 169
Query: 276 QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEL 310
V T+ + APE L + D++ G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 76 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 122
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 179
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 114 FSEKNVLGQGGFGKV---YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
++ + +G+G +G V Y V + +VA+K+++ FE RE++++ H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 171 LLRLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
++ + PT E++ + +L A + +K D + RGL+Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY--FLYQILRGLKYI 160
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPE 287
H + ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE
Sbjct: 161 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 288 YLSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 40/217 (18%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--HRNLLRLIGF 177
+G+G FG+V+RG G +VAVK + E + ++ RE E+ + H N+L I
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 178 CT----TPTERLLVYPFMQNLSV-AYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-- 230
T T+ LV + ++ S+ Y R E ++ ++AL A GL +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI------KLALSTASGLAHLHME 158
Query: 231 ---EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-------GT 280
P I HRD+K+ N+L+ ++ + D GLA VR + T + GT
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGT 214
Query: 281 MGHIAPEYLSTG------KSSERTDVFGYGIMLLELV 311
++APE L +S +R D++ G++ E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 75 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 121
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 178
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR 169
+ +F K++LG+G +G V G VA+K++ F+ P RE++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV---------AL 220
N++ + + +N + Y ++E+ + L V ++
Sbjct: 70 NIITIFNIQRPDS--------FENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIY 119
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT------ 274
R ++ LH +IHRD+K +N+L++ + + V DFGLA+++D + +
Sbjct: 120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 275 ---TQVRGTMGHIAPE-YLSTGKSSERTDVFGYGIMLLEL 310
T+ T + APE L++ K S DV+ G +L EL
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 76 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 122
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 179
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR 169
+ +F K++LG+G +G V G VA+K++ F+ P RE++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV---------AL 220
N++ + + +N + Y ++E+ + L V ++
Sbjct: 70 NIITIFNIQRPDS--------FENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIY 119
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD---VRKTNVTTQV 277
R ++ LH +IHRD+K +N+L++ + + V DFGLA+++D + T Q
Sbjct: 120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 278 RGTMGHI------APE-YLSTGKSSERTDVFGYGIMLLEL 310
G + + APE L++ K S DV+ G +L EL
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 76 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 122
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 179
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 74
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 187
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 75
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 188
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 74
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 187
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 98 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 144
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 201
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FGKVY+ + +A ++ + +S + E+E+++ H +++L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPG--EPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
+ ++ F +V + E+ G EP + V R+ + L +LH + +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH---SKRI 138
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR----GTMGHIAPEYL--ST 291
IHRD+KA NVL+ + + + DFG++ K T Q R GT +APE + T
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSA-----KNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 292 GKSSE---RTDVFGYGIMLLEL 310
K + + D++ GI L+E+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEM 215
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFS-----LDLASLIL 115
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG 172
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FGKVY+ + +A ++ + +S + E+E+++ H +++L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPG--EPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
+ ++ F +V + E+ G EP + V R+ + L +LH + +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH---SKRI 130
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR----GTMGHIAPEYL--ST 291
IHRD+KA NVL+ + + + DFG++ K T Q R GT +APE + T
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSA-----KNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 292 GKSSE---RTDVFGYGIMLLEL 310
K + + D++ GI L+E+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 118 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 164
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 221
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 74
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 187
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 90 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 136
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 193
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 90 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 136
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 193
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 103 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 149
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 206
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVL---ADGTK---VAVKRLTDFESPGGDAAFQR 158
+E+ L+ F E+ LG+ FGKVY+G L A G + VA+K L D F+
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 159 EVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRL---------------REI 203
E + + H N++ L+G T +++ + + + L R +
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 204 KPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 263
K D+V + A G+EYL H ++H+D+ NVL+ + + D GL
Sbjct: 122 KSALEPPDFV---HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 264 KLV---DVRKT--NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
+ V D K N +R +APE + GK S +D++ YG++L E+ +
Sbjct: 176 REVYAADYYKLLGNSLLPIRW----MAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD--GTK--VAVKRLTDFESPGGDAAFQREVE--MISVA 166
+F+ VLG+G FGKV +LAD GT+ A+K L D VE ++++
Sbjct: 20 DFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 167 VHRNLLRLIGFCTTPTERL-LVYPFMQNLSVAYRLREI-KPGEPVLDWVTRKRVALGAAR 224
L + C +RL V ++ + Y ++++ K EP + A +
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY-----AAEISI 131
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGH 283
GL +LH+ II+RD+K NV+LD + + DFG+ K + VTT + GT +
Sbjct: 132 GLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDY 186
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
IAPE ++ + D + YG++L E++ GQ D
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 78
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 191
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 103 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 149
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 206
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 104 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 150
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 207
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 86
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 199
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 74
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 187
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 91 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 137
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 194
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 104 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 150
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 207
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 118 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 164
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 221
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 104 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 150
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 207
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 86
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 199
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 93
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 206
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 91 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 137
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 194
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 104 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 150
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 207
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 103 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 149
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 206
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 103 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 149
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 206
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+++++ FE RE++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 145
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T T+ T + APE +
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 82
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 195
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 91 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 137
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 194
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 110 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 156
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 213
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V + G K+AVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA--------LGAARGLEYL 229
T T ++ + Y + + G + + V +++ RGL+Y+
Sbjct: 119 FTPATS-------LEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 170
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H + IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 171 H---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIM 223
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
T D++ G ++ EL+TG+
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 87
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 200
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 113 NFSEKNVLGQGGFGKVY--RGVL--ADGTKVAVKRLTDFESPGGDAAFQR-EVEMISVAV 167
+F VLGQG FGKV+ R V G A+K L D + E ++++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
H +++L T + L+ F++ + RL + E + K A GL+
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALGLD 144
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNVTTQVRGTMGHIAP 286
+LH + II+RD+K N+LLDE+ + DFGL+K +D K + GT+ ++AP
Sbjct: 145 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAP 199
Query: 287 EYLSTGKSSERTDVFGYGIMLLELVTGQ 314
E ++ S D + YG+++ E++TG
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTGS 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 209 VLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 268
+LDW + +AL +++H+ KI+HRD+K+ N+ L +D +GDFG+A++++
Sbjct: 127 ILDWFVQICLAL------KHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN- 176
Query: 269 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ GT +++PE + ++D++ G +L EL T + A +
Sbjct: 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTK----VAVKRL--TDFESPGGDAAFQREVE 161
D+F LG+G FG VY LA K VA+K L + E G + +RE+E
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ + H N+LRL + +R +Y ++ +E++ D +
Sbjct: 76 IQAHLHHPNILRLYNYFY---DRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTATIMEE 131
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTTQVRGT 280
A L Y H K+IHRD+K N+LL E + DFG + +R+ + GT
Sbjct: 132 LADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GT 184
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
+ ++ PE + +E+ D++ G++ EL+ G +
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRN 170
+LG GGFG VY G+ ++D VA+K R++D+ E P G V + V+
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
++RL+ + P +L+ L +P + + D++T +R AL +
Sbjct: 123 VIRLLDWFERPDSFVLI------------LERPEPVQDLFDFIT-ERGALQEELARSFFW 169
Query: 231 E------HC-NPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ HC N ++HRD+K N+L+D + E + DFG L+ K V T GT
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRV 226
Query: 283 HIAPEYLSTGKSSERT-DVFGYGIMLLELVTG 313
+ PE++ + R+ V+ GI+L ++V G
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 108
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 221
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + ++ H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 79
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 192
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 108
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 221
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 102
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 215
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLIL 115
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 119 VLGQGGFGKVY--RGVLADGTKVAVKRLTDFESPGG-DAAFQREVEMISVAVHRNLLRLI 175
VLG G F +V+ + L G A+K + +SP D++ + E+ ++ H N++ L
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
+ T LV + + R+ E V V ++YLHE+
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN--- 125
Query: 236 KIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG 292
I+HRD+K N+L +E+ + ++ DFGL+K+ + + + GT G++APE L+
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 293 KSSERTDVFGYGIMLLELVTG 313
S+ D + G++ L+ G
Sbjct: 183 PYSKAVDCWSIGVITYILLCG 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNAMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 145
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T + T + APE +
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV---LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
+D + +LG GG +V+ L V V R P F+RE + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 168 HRNLLRL--IGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H ++ + G TP L +V ++ ++ LR+I E + V A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADAC 143
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV--TTQVRGTM 281
+ L + H++ IIHRDVK AN+++ V DFG+A+ + +V T V GT
Sbjct: 144 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+++PE R+DV+ G +L E++TG+
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++ + +G+G +G V + +VA+K+++ FE RE++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 173 RLIGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ PT E++ +Q+L + +K D + RGL+Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--FLYQILRGLKYIH- 146
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV--RKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K +N+LL+ + + DFGLA++ D T + T + APE +
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 290 STGKSSERT-DVFGYGIMLLELVTGQ 314
K ++ D++ G +L E+++ +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 12 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 72 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 122
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 112
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 225
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 153
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 266
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRN 170
++++ V+G G FG VY+ L D G VA+K++ D F+ RE++++ H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 110
Query: 171 LLRLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAA 223
++RL F + E+ LV ++ YR+ R + L + K
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMG 282
R L Y+H I HRD+K N+LLD D + + DFG AK + + NV+ +
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 223
Query: 283 HIAPEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
+ APE + + DV+ G +L EL+ GQ
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV---LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
+D + +LG GG +V+ L V V R P F+RE + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HRNLLRL--IGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H ++ + G TP L +V ++ ++ LR+I E + V A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADAC 126
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV--TTQVRGTM 281
+ L + H++ IIHRDVK AN+++ V DFG+A+ + +V T V GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+++PE R+DV+ G +L E++TG+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLIL 115
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLIL 117
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 118 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 174
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV---LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
+D + +LG GG +V+ L V V R P F+RE + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 168 HRNLLRL--IGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
H ++ + G TP L +V ++ ++ LR+I E + V A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVT----LRDIVHTEGPMTPKRAIEVIADAC 126
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV--TTQVRGTM 281
+ L + H++ IIHRDVK AN+++ V DFG+A+ + +V T V GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+++PE R+DV+ G +L E++TG+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 71 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 119
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 120 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 176
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 75 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 123
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 124 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKW 180
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 91 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 139
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 140 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 196
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 197 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 91 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 139
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 140 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 196
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 197 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLIL 118
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 119 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 75 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 123
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 124 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 180
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 69 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 117
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 118 MKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 174
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 175 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 207
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 149
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 205
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 81 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 129
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 130 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 186
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVK--RLTDFESPGGDAAFQ--REVEM 162
+AT + +G G +G VY+ G VA+K R+ + GG REV +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 163 I---SVAVHRNLLRLIGFCTTP-TER----LLVYPFMQNLSVAYRLREIKPGEPVLDWVT 214
+ H N++RL+ C T T+R LV+ + Y + PG P T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA---ET 121
Query: 215 RKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
K + RGL++LH +C I+HRD+K N+L+ + DFGLA++ +
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--L 176
Query: 275 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEL 310
T V T+ + APE L + D++ G + E+
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLIL 120
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 121 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 217 RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVDVRKTNVTT 275
++ + + L YL E +IHRDVK +N+LLDE + + DFG++ +LVD + + +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 276 QVRGTMGHIAPEYLSTGKSSE-----RTDVFGYGIMLLELVTGQ 314
G ++APE + ++ R DV+ GI L+EL TGQ
Sbjct: 186 ---GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFS-----LDLASLIL 495
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 496 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGVLAD--GTK--VAVKRLTDFESPGGDAAFQREVEMIS 164
+A ++ +LG+G FG+VY GV + G K VAVK + F E ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 165 VAVHRNLLRLIGFCTT-PTERLL-VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA 222
H ++++LIG PT ++ +YP+ + + + L K VL V +L
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNKNSLKVLTLVL---YSLQI 118
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ + YL E N +HRD+ N+L+ +GDFGL++ ++ + R +
Sbjct: 119 CKAMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
++PE ++ + + +DV+ + + + E+++
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 112/283 (39%), Gaps = 75/283 (26%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + A + LG+G FGKV + G+ T VAVK L + + A
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 156 FQREVEMIS-VAVHRNLLRLIGFCTTPTERLLV------YPFMQN--------------- 193
E+++++ + H N++ L+G CT L+V Y + N
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDA 136
Query: 194 -LSVAYRLREIKPG-----EPVLDWVTRKR------------------------------ 217
L + + +++PG +P LD VT
Sbjct: 137 ALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPI 196
Query: 218 -------VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+ ARG+E+L K IHRD+ A N+LL E+ + DFGLA+ +
Sbjct: 197 TMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNP 253
Query: 271 TNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
V R + +APE + S ++DV+ YG++L E+ +
Sbjct: 254 DYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD---WVTRKRV---ALGAARG 225
+R+IG C + L++ + E+ P L V K + + G
Sbjct: 89 VRMIGICEAESWMLVM-----------EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 137
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGH 283
++YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 138 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 194
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELVT-GQR 315
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 195 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 150
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 206
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 114 FSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
+++ +G+G +G V T+VA+K+++ FE RE++++ H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 173 RLIGFCTTPTERLL--VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH 230
+ T + VY +Q+L + +K + D + RGL+Y+H
Sbjct: 105 GIRDILRASTLEAMRDVY-IVQDLMETDLYKLLKSQQLSNDHICY--FLYQILRGLKYIH 161
Query: 231 EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR--KTNVTTQVRGTMGHIAPEY 288
+ ++HRD+K +N+L++ + + DFGLA++ D T T+ T + APE
Sbjct: 162 ---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 289 LSTGKSSERT-DVFGYGIMLLELVTGQ 314
+ K ++ D++ G +L E+++ +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
L+YL N +IIHRD+K N+LLDE + DF +A ++ R+T +TT + GT ++
Sbjct: 127 ALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT-MAGTKPYM 181
Query: 285 APEYLSTGKS---SERTDVFGYGIMLLELVTGQRA 316
APE S+ K S D + G+ EL+ G+R
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 178 CTTPTERLL----VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
TP L VY + +L A +K + D V + + RGL+Y+H
Sbjct: 85 VFTPARSLEEFNDVY-LVTHLMGADLNNIVKCAKLTDDHV--QFLIYQILRGLKYIH--- 138
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTG 292
+ IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWM 194
Query: 293 KSSERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLIL 143
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ + +GDFGL++ ++ ++
Sbjct: 144 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 200
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 119 VLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL 174
+G+G FG V++G+ VA+K + S F +E + H ++++L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 175 IGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
IG T P ++ + L ++R+ LD + A + L YL
Sbjct: 74 IGVITENPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLESK- 127
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK 293
+ +HRD+ A NVL+ + +GDFGL++ ++ ++ + + +APE ++ +
Sbjct: 128 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 294 SSERTDVFGYGIMLLELV 311
+ +DV+ +G+ + E++
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFS-----LDLASLIL 115
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + +HRD+ A NVL+ +GDFGL++ ++ ++
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 155
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 211
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 150
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 206
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 151
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 207
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 156
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 212
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 156
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 212
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 149
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 205
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G +G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 74 RR---EGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 124
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 150
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 206
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 149
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 205
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 98
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 154
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 210
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 211 NQTVDIWSVGCIMAELLTGR 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 156
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 212
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 155
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 211
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGVLAD--GTK--VAVKRLTDFESPGGDAAFQREVEMIS 164
+A ++ +LG+G FG+VY GV + G K VAVK + F E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 165 VAVHRNLLRLIGFCTT-PTERLL-VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA 222
H ++++LIG PT ++ +YP+ + + + L K VL V +L
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNKNSLKVLTLVL---YSLQI 122
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ + YL E N +HRD+ N+L+ +GDFGL++ ++ + R +
Sbjct: 123 CKAMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
++PE ++ + + +DV+ + + + E+++
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 120 LGQGGFGKVYRGVLADGT-KVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G+G F VY+G+ + T +VA L D + + F+ E E + H N++R
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 178 ---------CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 228
C L ++ +++ +IK VL R+ + +GL++
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK----VLRSWCRQIL-----KGLQF 144
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
LH P IIHRD+K N+ + +V +GD GLA L ++ + V GT APE
Sbjct: 145 LHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPE 200
Query: 288 YLSTGKSSERTDVFGYGIMLLELVTGQ 314
K E DV+ +G LE T +
Sbjct: 201 XYEE-KYDESVDVYAFGXCXLEXATSE 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 141
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 197
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGVLAD--GTK--VAVKRLTDFESPGGDAAFQREVEMIS 164
+A ++ +LG+G FG+VY GV + G K VAVK + F E ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 165 VAVHRNLLRLIGFCTT-PTERLL-VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA 222
H ++++LIG PT ++ +YP+ + + + L K VL V +L
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNKNSLKVLTLVL---YSLQI 134
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ + YL E N +HRD+ N+L+ +GDFGL++ ++ + R +
Sbjct: 135 CKAMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
++PE ++ + + +DV+ + + + E+++
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 146
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 202
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 146
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 202
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 141
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 197
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFE--SPGGDAAFQREVE 161
R LQ+ +++ V+G+G FG+V KV A+K L+ FE A F E +
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+++ A +++L FC ++ L Y + E PG +++ ++ V
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYL-----------YMVMEYMPGGDLVNLMSNYDVPEK 174
Query: 222 AAR--------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNV 273
A+ L+ +H +IHRDVK N+LLD+ + DFG +D
Sbjct: 175 WAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH 231
Query: 274 TTQVRGTMGHIAPEYLST----GKSSERTDVFGYGIMLLELVTGQ 314
GT +I+PE L + G D + G+ L E++ G
Sbjct: 232 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 276
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 149
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 205
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 87
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 143
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 199
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 200 NQTVDIWSVGCIMAELLTGR 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 150
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 206
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 140
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 196
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 146
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 202
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 146
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 202
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 163
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 219
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 29/224 (12%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFES-PGGDAAFQREVEM 162
R+L++ +++ V+G+G FG+V KV A+K L+ FE D+AF E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 163 ISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA 222
I + F +P L Y F Q+ Y + E PG +++ ++ V
Sbjct: 122 I-----------MAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW 169
Query: 223 AR--------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
AR L+ +H IHRDVK N+LLD+ + DFG ++
Sbjct: 170 ARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 275 TQVRGTMGHIAPEYLST----GKSSERTDVFGYGIMLLELVTGQ 314
GT +I+PE L + G D + G+ L E++ G
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 29/224 (12%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFES-PGGDAAFQREVEM 162
R+L++ +++ V+G+G FG+V KV A+K L+ FE D+AF E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 163 ISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA 222
I + F +P L Y F Q+ Y + E PG +++ ++ V
Sbjct: 127 I-----------MAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW 174
Query: 223 AR--------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
AR L+ +H IHRDVK N+LLD+ + DFG ++
Sbjct: 175 ARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 275 TQVRGTMGHIAPEYLST----GKSSERTDVFGYGIMLLELVTGQ 314
GT +I+PE L + G D + G+ L E++ G
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 164
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 220
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 29/224 (12%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFES-PGGDAAFQREVEM 162
R+L++ +++ V+G+G FG+V KV A+K L+ FE D+AF E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 163 ISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGA 222
I + F +P L Y F Q+ Y + E PG +++ ++ V
Sbjct: 127 I-----------MAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW 174
Query: 223 AR--------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
AR L+ +H IHRDVK N+LLD+ + DFG ++
Sbjct: 175 ARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 275 TQVRGTMGHIAPEYLST----GKSSERTDVFGYGIMLLELVTGQ 314
GT +I+PE L + G D + G+ L E++ G
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 140
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 196
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 163
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 219
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 167
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 223
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 86
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 142
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE +
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 198
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 199 NQTVDIWSVGCIMAELLTGR 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 164
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T T + APE L+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 220
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 26/210 (12%)
Query: 119 VLGQGGFGKVYRG-------VLADGTKVAVKRLTDFESPGGDAA--------FQREVEMI 163
L QG F K+ L K +++ DF D F+ E+++I
Sbjct: 38 TLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSV----AYRLREIKPGEPVLDWVTRKRVA 219
+ + L G T E ++Y +M+N S+ Y K + K +
Sbjct: 98 TDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII 157
Query: 220 LGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG 279
Y+H N I HRDVK +N+L+D++ + DFG ++ + +K + RG
Sbjct: 158 KSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS---RG 212
Query: 280 TMGHIAPEYLSTGKSSE--RTDVFGYGIML 307
T + PE+ S S + D++ GI L
Sbjct: 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 14/214 (6%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVK--RLTDFESPGGDAA--FQREVEMI 163
L D + V+G+G F V R + + G + AVK + F S G + +RE +
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
+ H +++ L+ ++ +V+ FM + + + + V
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVR-G 279
L Y H++ IIHRDVK NVLL + +GDFG+A + + ++ + R G
Sbjct: 141 EALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVG 195
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T +APE + + DV+G G++L L++G
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 206 GEPVLDWVTRKR--------VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVV 257
G + D VT R V L R L YLH N +IHRD+K+ ++LL D +
Sbjct: 126 GGALTDIVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKL 182
Query: 258 GDFG----LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
DFG ++K V RK V GT +APE +S D++ GIM++E++ G
Sbjct: 183 SDFGFCAQVSKEVPKRKXLV-----GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 314 Q 314
+
Sbjct: 238 E 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKEIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFGLAK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 25/203 (12%)
Query: 120 LGQGGFGKVYRGVLAD-GTKVAVKRL---TDFESPGGDAAFQREVEMISVAVHRNLLRLI 175
LG+G +G VY+ + + G VA+K++ +D + +E+ ++ ++++
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE------IIKEISIMQQCDSPHVVKYY 90
Query: 176 GFCTTPTERLLVYPFMQNLSVA--YRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
G T+ +V + SV+ RLR E + + + + +GLEYLH
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL-----KGLEYLHFM- 144
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLA-KLVD-VRKTNVTTQVRGTMGHIAPEYLST 291
+ IHRD+KA N+LL+ + A + DFG+A +L D + K N V GT +APE +
Sbjct: 145 --RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX---VIGTPFWMAPEVIQE 199
Query: 292 GKSSERTDVFGYGIMLLELVTGQ 314
+ D++ GI +E+ G+
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGK 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKEIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFGLAK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 103 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQR 158
S R+ ++ + +G+G FG V++G+ VA+K + S F +
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 159 EVEMISVAVHRNLLRLIGFCT-TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E + H ++++LIG T P ++ + L ++R+ LD +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFS-----LDLASLIL 495
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV 277
A + L YL + + +HRD+ A NVL+ +GDFGL++ ++ ++
Sbjct: 496 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + +APE ++ + + +DV+ +G+ + E++
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
++HRD+K ANV LD +GDFGLA++++ T+ GT +++PE ++ +E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKTFVGTPYYMSPEQMNRMSYNE 195
Query: 297 RTDVFGYGIMLLELVTGQRAID-FSRXXXXXXXXXXXXXXXXXR-EKRLDAIVDRNLN-K 353
++D++ G +L EL FS+ R L+ I+ R LN K
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255
Query: 354 NYNIQEVETMIQVALL 369
+Y+ VE +++ L+
Sbjct: 256 DYHRPSVEEILENPLI 271
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 120 LGQGGFGKVYRGVLAD-GTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V A KVAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR---------VALGAARGLEY 228
T T +++ S Y + + + L+ + + + + RGL+Y
Sbjct: 96 FTPATS-------IEDFSEVYLVTTLMGAD--LNNIVKSQALSDEHVQFLVYQLLRGLKY 146
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE- 287
+H + IIHRD+K +NV ++ED E + DFGLA+ D T T + APE
Sbjct: 147 IH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----ATRWYRAPEI 199
Query: 288 YLSTGKSSERTDVFGYGIMLLELVTGQ 314
L+ ++ D++ G ++ EL+ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
++HRD+K ANV LD +GDFGLA++++ T+ GT +++PE ++ +E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKAFVGTPYYMSPEQMNRMSYNE 195
Query: 297 RTDVFGYGIMLLELVTGQRAID-FSRXXXXXXXXXXXXXXXXXR-EKRLDAIVDRNLN-K 353
++D++ G +L EL FS+ R L+ I+ R LN K
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255
Query: 354 NYNIQEVETMIQVALL 369
+Y+ VE +++ L+
Sbjct: 256 DYHRPSVEEILENPLI 271
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
LG+G G+V V VAVK + + ++E+ + + H N+++ G
Sbjct: 13 TLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
E + Y F++ S I+P G P D +R G+ YLH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLH---GI 123
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV-RKTNVTTQVRGTMGHIAPEYLSTGK- 293
I HRD+K N+LLDE + DFGLA + + + ++ GT+ ++APE L +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 SSERTDVFGYGIMLLELVTGQRAID 318
+E DV+ GI+L ++ G+ D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 120 LGQGGFGKVYRGVLAD-GTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V A KVAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR---------KRVALGAARGLEY 228
T T +++ S Y + + + L+ + + + + RGL+Y
Sbjct: 88 FTPATS-------IEDFSEVYLVTTLMGAD--LNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE- 287
+H + IIHRD+K +NV ++ED E + DFGLA+ D T T + APE
Sbjct: 139 IH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV----ATRWYRAPEI 191
Query: 288 YLSTGKSSERTDVFGYGIMLLELVTGQ 314
L+ ++ D++ G ++ EL+ G+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + D+GLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGL + D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV 167
++ +NF VLG G +GKV+ G +L + Q+
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTG--KLYAMKVLKKATIVQKAKTTEHTRT 107
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR--- 224
R +L I +P L Y F + L I GE R+R +
Sbjct: 108 ERQVLEHI--RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV 165
Query: 225 -----GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG 279
LE+LH+ II+RD+K N+LLD + V+ DFGL+K +T G
Sbjct: 166 GEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG 222
Query: 280 TMGHIAPEYLSTGKS--SERTDVFGYGIMLLELVTG 313
T+ ++AP+ + G S + D + G+++ EL+TG
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 44/225 (19%)
Query: 114 FSEKNVLGQGGFGKVYRGVL-ADGTKVAVK-------RLTDFESPGGDAAFQREVEMI-S 164
+ K+V+G+G V R V A G + AVK RL+ + A +RE ++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 165 VAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR 224
VA H +++ LI + + LV+ M+ GE + D++T K VAL
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRK------------GE-LFDYLTEK-VALSEKE 201
Query: 225 ----------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
+ +LH + I+HRD+K N+LLD++ + + DFG + +
Sbjct: 202 TRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKL 256
Query: 275 TQVRGTMGHIAPEYLSTGKSS------ERTDVFGYGIMLLELVTG 313
++ GT G++APE L + D++ G++L L+ G
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L Y F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L Y F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L Y F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F +G G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + DFGLA+ D T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 120 LGQGGFGKVYRGVLADGTK-VAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRL---- 174
LG GG G V+ V D K VA+K++ P RE+++I H N++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIV-LTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 175 ----------IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR 224
+G T +V +M+ L + P+L+ R R
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMET-----DLANVLEQGPLLEEHAR-LFMYQLLR 131
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLD-EDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TM 281
GL+Y+H + ++HRD+K AN+ ++ ED +GDFGLA+++D ++ G T
Sbjct: 132 GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 282 GHIAPE-YLSTGKSSERTDVFGYGIMLLELVTGQ 314
+ +P LS ++ D++ G + E++TG+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F +G G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 151
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ + T T + APE L+
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHY 207
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 120 LGQGGFGKVYRGVLAD-GTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V A KVAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR---------KRVALGAARGLEY 228
T T +++ S Y + + + L+ + + + + RGL+Y
Sbjct: 96 FTPATS-------IEDFSEVYLVTTLMGAD--LNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE- 287
+H + IIHRD+K +NV ++ED E + DFGLA+ D T T + APE
Sbjct: 147 IH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----ATRWYRAPEI 199
Query: 288 YLSTGKSSERTDVFGYGIMLLELVTGQ 314
L+ ++ D++ G ++ EL+ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 151
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ + T T + APE L+
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHY 207
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 151
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ + T T + APE L+
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHY 207
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 140
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T + APE L+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWMHY 196
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVH 168
+DN+ K LG+G F V R V G + A K + + D +RE + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA----- 223
N++RL + LV+ + GE D V R+ + A
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTG------------GELFEDIVAREFYSEADASHCIQ 111
Query: 224 ---RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVRKTNVTTQV 277
+ Y H + I+HR++K N+LL + + DFGLA ++V +
Sbjct: 112 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGF 166
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT G+++PE L S+ D++ G++L L+ G
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 76
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 135
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 136 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTP 188
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 35/209 (16%)
Query: 120 LGQGGFGKVY---RGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIG 176
LG G +G+V V + + R T S ++ EV ++ + H N+++L
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLDHPNIMKL-- 101
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR--KRVALGAA-------RGLE 227
Y F ++ Y + E G + D + K + AA G+
Sbjct: 102 -----------YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVT 150
Query: 228 YLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
YLH+H I+HRD+K N+LL ++D + DFGL+ + + +K + GT +I
Sbjct: 151 YLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--MKERLGTAYYI 205
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTG 313
APE L K E+ DV+ G++L L+ G
Sbjct: 206 APEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVH 168
+DN+ K LG+G F V R V G + A K + + D +RE + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA----- 223
N++RL + LV+ + GE D V R+ + A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTG------------GELFEDIVAREFYSEADASHCIQ 112
Query: 224 ---RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVRKTNVTTQV 277
+ Y H + I+HR++K N+LL + + DFGLA ++V +
Sbjct: 113 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGF 167
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT G+++PE L S+ D++ G++L L+ G
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 172 LRLIGFCTTPTERLLVY-----PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
+R+IG C + L++ P + L +++ + +++ V + + G+
Sbjct: 433 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQ------VSMGM 482
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
+YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 483 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT-GQRA 316
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 116 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREV----EMISVAVHRNL 171
E LG G FG V +G V + ++ D A + E+ ++ + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 172 LRLIGFCTTPTERLLVY-----PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
+R+IG C + L++ P + L +++ + +++ V + + G+
Sbjct: 434 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQ------VSMGM 483
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRG--TMGHI 284
+YL E +HRD+ A NVLL A + DFGL+K + + Q G +
Sbjct: 484 KYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVT-GQRA 316
APE ++ K S ++DV+ +G+++ E + GQ+
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 167
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T + APE L+
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV----ATRWYRAPEIMLNWMHY 223
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R AR
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F +G G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVH 168
+DN+ K LG+G F V R V G + A K + + D +RE + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA----- 223
N++RL + LV+ + GE D V R+ + A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTG------------GELFEDIVAREFYSEADASHCIQ 112
Query: 224 ---RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVRKTNVTTQV 277
+ Y H + I+HR++K N+LL + + DFGLA ++V +
Sbjct: 113 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGF 167
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT G+++PE L S+ D++ G++L L+ G
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
++HRD+K ANV LD +GDFGLA++++ + + GT +++PE ++ +E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDEDFAKEFVGTPYYMSPEQMNRMSYNE 195
Query: 297 RTDVFGYGIMLLELVTGQRAID-FSRXXXXXXXXXXXXXXXXXR-EKRLDAIVDRNLN-K 353
++D++ G +L EL FS+ R L+ I+ R LN K
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255
Query: 354 NYNIQEVETMIQVALL 369
+Y+ VE +++ L+
Sbjct: 256 DYHRPSVEEILENPLI 271
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 99/268 (36%), Gaps = 73/268 (27%)
Query: 113 NFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
+F +G+GGFG V+ D A+KR+ REV+ ++ H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 172 LRLI-GFCTTPTER-----------------LLVYPF-----------MQNLSVAYRLRE 202
+R + TP E+ L P M S + +
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 203 IKPGEPVL---------------DWVTRK------------RVALGAARGLEYLHEHCNP 235
++P P + DW+ R+ + + A +E+LH
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK--- 183
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTT------------QVRGTMGH 283
++HRD+K +N+ D VGDFGL +D + T QV GT +
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV-GTKLY 242
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELV 311
++PE + S + D+F G++L EL+
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 164
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DFGLA+ D T + APE L+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV----ATRWYRAPEIMLNWMHY 220
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
L YLHE II+RD+K NVLLD + + D+G+ K +R + T+ GT +I
Sbjct: 133 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 188
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
APE L D + G+++ E++ G+ D
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
L YLHE II+RD+K NVLLD + + D+G+ K +R + T+ GT +I
Sbjct: 165 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYI 220
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
APE L D + G+++ E++ G+ D
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
L YLHE II+RD+K NVLLD + + D+G+ K +R + T+ GT +I
Sbjct: 122 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 177
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
APE L D + G+++ E++ G+ D
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 53/221 (23%)
Query: 118 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
VLGQG FGKV+ VK+++ G DA R++ + V + + L++
Sbjct: 30 KVLGQGSFGKVF----------LVKKIS-----GSDA---RQLYAMKV-LKKATLKVRDR 70
Query: 178 CTTPTERLLV----YPFMQNLSVAYR--------LREIKPGEPVLDWVTR--KRVALGA- 222
T ER ++ +PF+ L A++ L ++ G D TR K V
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG----DLFTRLSKEVMFTEE 126
Query: 223 ---------ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTN 272
A L++LH + II+RD+K N+LLDE+ + DFGL+K +D K
Sbjct: 127 DVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT+ ++APE ++ ++ D + +G+++ E++TG
Sbjct: 184 YS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR---------KRVALG 221
R++ P L + F N S Y + E PG + + R + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
L YLHE II+RD+K NVLLD + + D+G+ K +R + T+ GT +I
Sbjct: 118 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 173
Query: 285 APEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 318
APE L D + G+++ E++ G+ D
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR---------KRVALG 221
R++ P L + F N S Y + E PG + + R + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 53/221 (23%)
Query: 118 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
VLGQG FGKV+ VK+++ G DA R++ + V + + L++
Sbjct: 30 KVLGQGSFGKVF----------LVKKIS-----GSDA---RQLYAMKV-LKKATLKVRDR 70
Query: 178 CTTPTER-LLV---YPFMQNLSVAYR--------LREIKPGEPVLDWVTR--KRVALGA- 222
T ER +LV +PF+ L A++ L ++ G D TR K V
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG----DLFTRLSKEVMFTEE 126
Query: 223 ---------ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTN 272
A L++LH + II+RD+K N+LLDE+ + DFGL+K +D K
Sbjct: 127 DVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT+ ++APE ++ ++ D + +G+++ E++TG
Sbjct: 184 YS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR---------KRVALG 221
R++ P L + F N S Y + E PG + + R + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 202
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 53/221 (23%)
Query: 118 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
VLGQG FGKV+ VK+++ G DA R++ + V + + L++
Sbjct: 31 KVLGQGSFGKVF----------LVKKIS-----GSDA---RQLYAMKV-LKKATLKVRDR 71
Query: 178 CTTPTER-LLV---YPFMQNLSVAYR--------LREIKPGEPVLDWVTR--KRVALGA- 222
T ER +LV +PF+ L A++ L ++ G D TR K V
Sbjct: 72 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG----DLFTRLSKEVMFTEE 127
Query: 223 ---------ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTN 272
A L++LH + II+RD+K N+LLDE+ + DFGL+K +D K
Sbjct: 128 DVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 184
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT+ ++APE ++ ++ D + +G+++ E++TG
Sbjct: 185 YS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 38/224 (16%)
Query: 107 LQLATDNFSEKNVLGQGGFGKVYRGVLAD---GTKVAVK--RLTDFESPGGDAAFQREVE 161
Q +D + LG G +G+V + D G + A+K + + + A EV
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVA 73
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT--RKRVA 219
++ H N+++L Y F ++ Y + E+ G + D + +K
Sbjct: 74 VLKQLDHPNIMKL-------------YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE 120
Query: 220 LGAA-------RGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFGLAKLVDVR 269
+ AA G YLH+H I+HRD+K N+LL+ D + DFGL+ +V
Sbjct: 121 VDAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV- 176
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT +IAPE L K E+ DV+ G++L L+ G
Sbjct: 177 -GGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 36/219 (16%)
Query: 111 TDNFSEKNVLGQGGFGKVY--RGVLADGTKVAVK--RLTDFESPGGDAAFQREVEMISVA 166
+D + LG G +G+V + L G + A+K + + + A EV ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVT--RKRVALGAA- 223
H N+++L Y F ++ Y + E+ G + D + +K + AA
Sbjct: 62 DHPNIMKL-------------YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV 108
Query: 224 ------RGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFGLAKLVDVRKTNVT 274
G YLH+H I+HRD+K N+LL+ D + DFGL+ +V
Sbjct: 109 IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV--GGKM 163
Query: 275 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT +IAPE L K E+ DV+ G++L L+ G
Sbjct: 164 KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAA-FQREVEMISVAVHRNLLRLIG 176
+G GGF KV + G VA+K + D + G D + E+E + H+++ +L
Sbjct: 17 TIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQL-- 73
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV-TRKRVALGAAR--------GLE 227
Y ++ + + + E PG + D++ ++ R++ R +
Sbjct: 74 -----------YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE 287
Y+H HRD+K N+L DE + + DFGL K G++ + APE
Sbjct: 123 YVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE 179
Query: 288 YLSTGKS--SERTDVFGYGIMLLELVTGQRAID 318
L GKS DV+ GI+L L+ G D
Sbjct: 180 -LIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 83
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 142
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 195
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+ ++ED E + FGLA+ D T T + APE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 296 ERT-DVFGYGIMLLELVTGQ 314
+T D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + DF LA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
LG G FG V+R V +V V + + P + E+ +++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 180 TPTERLLVYPFMQN-------LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH 232
E +L+ F+ + Y++ E + V++++ + A GL+++HEH
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAE----VINYMRQ------ACEGLKHMHEH 168
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVG--DFGLA-KLVDVRKTNVTTQVRGTMGHIAPEYL 289
I+H D+K N++ + + V DFGLA KL VTT T APE +
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIV 222
Query: 290 STGKSSERTDVFGYGIMLLELVTG 313
TD++ G++ L++G
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVH 168
+DN+ K LG+G F V R V G + A K + + D +RE + H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA----- 223
N++RL + LV+ + GE D V R+ + A
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTG------------GELFEDIVAREFYSEADASHCIQ 135
Query: 224 ---RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVRKTNVTTQV 277
+ Y H + I+HR++K N+LL + + DFGLA ++V +
Sbjct: 136 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGF 190
Query: 278 RGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT G+++PE L S+ D++ G++L L+ G
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + D GLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 39/226 (17%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQ---------REVEM 162
+N+ K +LG+G V R + K ++ D G +A + +EV++
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 163 I-SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ V+ H N+++L T T LV+ M K GE + D++T K V L
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLM------------KKGE-LFDYLTEK-VTLS 109
Query: 222 AARG-------LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
LE + I+HRD+K N+LLD+D + DFG + +D +
Sbjct: 110 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--L 167
Query: 275 TQVRGTMGHIAPEYLSTGKSS------ERTDVFGYGIMLLELVTGQ 314
+V GT ++APE + + + D++ G+++ L+ G
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 213
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ + F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKIL------------KKEVIVA 191
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V L R++ P L Y F + + + + GE + ++R+RV
Sbjct: 192 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE-LFFHLSRERVFSE 250
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA L+YLH N +++RD+K N++LD+D + DFGL K ++
Sbjct: 251 DRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGA 307
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 308 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 111
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R++ P L + F N S Y + E PG + + R R + AR
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 223
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 120 LGQGGFGKVYRGVLADGTK-VAVKRL-TDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G+G +G V++ + + VA+KR+ D + G ++ RE+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 178 CTTPTERLLVYPFM-QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
+ + LV+ F Q+L + + G+ LD K +GL + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYF---DSCNGD--LDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK-SS 295
++HRD+K N+L++ + E + DFGLA+ + + +V T+ + P+ L K S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 296 ERTDVFGYGIMLLELVTGQRAI 317
D++ G + EL R +
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ + F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKIL------------KKEVIVA 188
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V L R++ P L Y F + + + + GE + ++R+RV
Sbjct: 189 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE-LFFHLSRERVFSE 247
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA L+YLH N +++RD+K N++LD+D + DFGL K ++
Sbjct: 248 DRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGA 304
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + D GLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 112 DNFSEKNVLGQGGFGKV-YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
DNF + +G+G G V V + G VAVK++ D EV ++ H N
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR--------VALGA 222
++ + E +V F++ G + D VT R V L
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLE-------------GGALTDIVTHTRMNEEQIAAVCLAV 125
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG----LAKLVDVRKTNVTTQVR 278
+ L LH +IHRD+K+ ++LL D + DFG ++K V RK V
Sbjct: 126 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----- 177
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT +APE +S D++ GIM++E+V G+
Sbjct: 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 112 DNFSEKNVLGQGGFGKV-YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
DNF + +G+G G V V + G VAVK++ D EV ++ H N
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR--------VALGA 222
++ + E +V F++ G + D VT R V L
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLE-------------GGALTDIVTHTRMNEEQIAAVCLAV 134
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG----LAKLVDVRKTNVTTQVR 278
+ L LH +IHRD+K+ ++LL D + DFG ++K V RK V
Sbjct: 135 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----- 186
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT +APE +S D++ GIM++E+V G+
Sbjct: 187 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 119 VLGQGGFGKV-----YRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNL 171
LG G FGKV Y + +D VAVK L A E++++S + H N+
Sbjct: 48 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 172 LRLIGFCTT--PTERLLVY-------PFMQNLSVAYRLREIKPG-----EPVLDWVTRKR 217
+ L+G CT PT + Y F++ ++ + P E LD
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 218 VALGAARGLEYL-HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN---V 273
+ A+G+ +L ++C IHRD+ A N+LL + DFGLA+ D++ + V
Sbjct: 168 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYVV 221
Query: 274 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
R + +APE + + +DV+ YGI L EL +
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 119 VLGQGGFGKV-----YRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNL 171
LG G FGKV Y + +D VAVK L A E++++S + H N+
Sbjct: 46 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 172 LRLIGFCTT--PTERLLVY-------PFMQNLSVAYRLREIKPG-----EPVLDWVTRKR 217
+ L+G CT PT + Y F++ ++ + P E LD
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 218 VALGAARGLEYL-HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN---V 273
+ A+G+ +L ++C IHRD+ A N+LL + DFGLA+ D++ + V
Sbjct: 166 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYVV 219
Query: 274 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
R + +APE + + +DV+ YGI L EL +
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 83
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR---------KRVALG 221
R++ P L + F N S Y + E PG + + R + A
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 142
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTP 195
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ + F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKIL------------KKEVIVA 49
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V L R++ P L Y F + + + + GE + ++R+RV
Sbjct: 50 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE-LFFHLSRERVFSE 108
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA L+YLH N +++RD+K N++LD+D + DFGL K ++
Sbjct: 109 DRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGA 165
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 166 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ + F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKIL------------KKEVIVA 50
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V L R++ P L Y F + + + + GE + ++R+RV
Sbjct: 51 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE-LFFHLSRERVFSE 109
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA L+YLH N +++RD+K N++LD+D + DFGL K ++
Sbjct: 110 DRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGA 166
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 167 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 31/230 (13%)
Query: 108 QLATDNFSEKNVLGQGGFGKV-----YRGVLADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ + S LG G FGKV Y + +D VAVK L A E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 162 MIS-VAVHRNLLRLIGFCTT--PTERLLVY-------PFMQNLSVAYRLREIKPG----- 206
++S + H N++ L+G CT PT + Y F++ ++ + P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 207 EPVLDWVTRKRVALGAARGLEYL-HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 265
E LD + A+G+ +L ++C IHRD+ A N+LL + DFGLA+
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR- 216
Query: 266 VDVRKTN---VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
D++ + V R + +APE + + +DV+ YGI L EL +
Sbjct: 217 -DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ + F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKIL------------KKEVIVA 48
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V L R++ P L Y F + + + + GE + ++R+RV
Sbjct: 49 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE-LFFHLSRERVFSE 107
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA L+YLH N +++RD+K N++LD+D + DFGL K ++
Sbjct: 108 DRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGA 164
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 165 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 39/226 (17%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQ---------REVEM 162
+N+ K +LG+G V R + K ++ D G +A + +EV++
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 163 I-SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ V+ H N+++L T T LV+ M K GE + D++T K V L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLM------------KKGE-LFDYLTEK-VTLS 122
Query: 222 AARG-------LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
LE + I+HRD+K N+LLD+D + DFG + +D +
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--L 180
Query: 275 TQVRGTMGHIAPEYLSTGKSS------ERTDVFGYGIMLLELVTGQ 314
+V GT ++APE + + + D++ G+++ L+ G
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 112 DNFSEKNVLGQGGFGKV-YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
DNF + +G+G G V V + G VAVK++ D EV ++ H N
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR--------VALGA 222
++ + E +V F++ G + D VT R V L
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLE-------------GGALTDIVTHTRMNEEQIAAVCLAV 129
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG----LAKLVDVRKTNVTTQVR 278
+ L LH +IHRD+K+ ++LL D + DFG ++K V RK V
Sbjct: 130 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----- 181
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT +APE +S D++ GIM++E+V G+
Sbjct: 182 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 112 DNFSEKNVLGQGGFGKV-YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
DNF + +G+G G V V + G VAVK++ D EV ++ H N
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR--------VALGA 222
++ + E +V F++ G + D VT R V L
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLE-------------GGALTDIVTHTRMNEEQIAAVCLAV 136
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG----LAKLVDVRKTNVTTQVR 278
+ L LH +IHRD+K+ ++LL D + DFG ++K V RK V
Sbjct: 137 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----- 188
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT +APE +S D++ GIM++E+V G+
Sbjct: 189 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G G +G V G +VAVK+L+ F+S RE+ ++ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 178 CTTPTERLLVYP--FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNP 235
TP L + ++ + L I + + D + + RGL+Y+H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---SA 144
Query: 236 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPE-YLSTGKS 294
IIHRD+K +N+ ++ED E + D GLA+ D T T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 200
Query: 295 SERTDVFGYGIMLLELVTGQ 314
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 119 VLGQGGFGKV-----YRGVLADGT-KVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNL 171
LG G FGKV Y + +D VAVK L A E++++S + H N+
Sbjct: 30 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 172 LRLIGFCTT--PTERLLVY-------PFMQNLSVAYRLREIKPG-----EPVLDWVTRKR 217
+ L+G CT PT + Y F++ ++ + P E LD
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 218 VALGAARGLEYL-HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN---V 273
+ A+G+ +L ++C IHRD+ A N+LL + DFGLA+ D++ + V
Sbjct: 150 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR--DIKNDSNYVV 203
Query: 274 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
R + +APE + + +DV+ YGI L EL +
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR-KRVALGAAR----- 224
R+ P L + F N S Y + E PG + + R R + AR
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDN-SNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 225 ---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTP 203
Query: 282 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 108 QLATDNFSEKNVLGQGGFGKV-----YRGVLADGT-KVAVKRLTDFESPGGDAAFQREVE 161
+ + S LG G FGKV Y + +D VAVK L A E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 162 MIS-VAVHRNLLRLIGFCTT--PTERLLVY-------PFMQNLSVAYRLREIKPG----- 206
++S + H N++ L+G CT PT + Y F++ ++ + P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 207 EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 266
E LD + A+G+ +L + IHRD+ A N+LL + DFGLA+ +
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHI 218
Query: 267 DVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
V R + +APE + + +DV+ YGI L EL +
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 120 LGQGGFGKVYRGVLAD-GTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G+G +G V++ D G VA+K+ + E P RE+ M+ H NL+ L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 237
LV+ + + +V + L + G P K + + + + H+H
Sbjct: 71 FRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEH---LVKSITWQTLQAVNFCHKH---NC 123
Query: 238 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL-STGKSSE 296
IHRDVK N+L+ + + DFG A+L+ +V T + +PE L +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYGP 182
Query: 297 RTDVFGYGIMLLELVTG 313
DV+ G + EL++G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 65/305 (21%)
Query: 117 KNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLI 175
+ VL +GGF VY + G + A+KRL E A Q M ++ H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 176 GFCTTPT-----------ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR 224
FC+ + E LL+ + V + L++++ P L T ++ R
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEF-LKKMESRGP-LSCDTVLKIFYQTCR 147
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD---------VRKTNVTT 275
++++H P IIHRD+K N+LL + DFG A + R+ V
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 276 QV--RGTMGHIAPEYL---STGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXX 330
++ T + PE + S E+ D++ G +L L Q +
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE------------ 254
Query: 331 XXXXXXXXREKRLDAIVDRNLNKNYNIQEVETMIQV------ALLCTQASPEDRPAMSEV 384
D R +N Y+I +T V A+L Q +PE+R +++EV
Sbjct: 255 -------------DGAKLRIVNGKYSIPPHDTQYTVFHSLIRAML--QVNPEERLSIAEV 299
Query: 385 VRMLE 389
V L+
Sbjct: 300 VHQLQ 304
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQ---------REVEM 162
+N+ K +LG+G V R + K ++ D G +A + +EV++
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 163 I-SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALG 221
+ V+ H N+++L T T LV+ M K GE + D++T K V L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLM------------KKGE-LFDYLTEK-VTLS 122
Query: 222 AARG-------LEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVT 274
LE + I+HRD+K N+LLD+D + DFG + +D +
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--L 180
Query: 275 TQVRGTMGHIAPEYLSTGKSS------ERTDVFGYGIMLLELVTGQ 314
V GT ++APE + + + D++ G+++ L+ G
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLVD---VRKTNVTTQ- 276
A GLEYLH +I+H DVKA NVLL D A + DFG A + + K+ +T
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT H+APE + + DV+ M+L ++ G
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 112 DNFSEKNVLGQGGFGKV-YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
DNF + +G+G G V V + G VAVK++ D EV ++ H N
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR--------VALGA 222
++ + E +V F++ G + D VT R V L
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLE-------------GGALTDIVTHTRMNEEQIAAVCLAV 179
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG----LAKLVDVRKTNVTTQVR 278
+ L LH +IHRD+K+ ++LL D + DFG ++K V RK V
Sbjct: 180 LQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----- 231
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT +APE +S D++ GIM++E+V G+
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 112 DNFSEKNVLGQGGFGKV-YRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
DNF + +G+G G V V + G VAVK++ D EV ++ H N
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR--------VALGA 222
++ + E +V F++ G + D VT R V L
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLE-------------GGALTDIVTHTRMNEEQIAAVCLAV 256
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG----LAKLVDVRKTNVTTQVR 278
+ L LH +IHRD+K+ ++LL D + DFG ++K V RK V
Sbjct: 257 LQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----- 308
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT +APE +S D++ GIM++E+V G+
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ ++F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKIL------------RKEVIIA 50
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V + R++ P L Y F + + + + GE + ++R+RV
Sbjct: 51 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-LFFHLSRERVFTE 109
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA LEYLH +++RD+K N++LD+D + DFGL K +
Sbjct: 110 ERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGA 165
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 166 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
II+RD+K NV+LD + + DFG+ K ++ T GT +IAPE ++ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 297 RTDVFGYGIMLLELVTGQRAID 318
D + +G++L E++ GQ +
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFE 543
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-AVVGDFGLAKLVD---VRKTNVTTQ- 276
A GLEYLH +I+H DVKA NVLL D A + DFG A + + K+ +T
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT H+APE + + D++ M+L ++ G
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-AVVGDFGLAKLVD---VRKTNVTTQ- 276
A GLEYLH +I+H DVKA NVLL D A + DFG A + + K+ +T
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT H+APE + + D++ M+L ++ G
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-AVVGDFGLAKLVD---VRKTNVTTQ- 276
A GLEYLH +I+H DVKA NVLL D A + DFG A + + K+ +T
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT H+APE + + D++ M+L ++ G
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQ-REVEMISVAVHRNLL 172
++ V+G G FG V++ L + +VA+K++ D F+ RE++++ + H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRIVKHPNVV 95
Query: 173 RLIGFCTTPTERL------LVYPFMQNLSVAYRL-REIKPGEPVLDWVTRKRVALGAARG 225
L F + ++ LV ++ YR R + + + K R
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
L Y+H I HRD+K N+LLD + + DFG AK++ + NV+ + +
Sbjct: 154 LAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYR 208
Query: 285 APEYL-STGKSSERTDVFGYGIMLLELVTGQ 314
APE + + D++ G ++ EL+ GQ
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ ++F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKIL------------RKEVIIA 45
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V + R++ P L Y F + + + + GE + ++R+RV
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-LFFHLSRERVFTE 104
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA LEYLH +++RD+K N++LD+D + DFGL K +
Sbjct: 105 ERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGA 160
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE 296
II+RD+K NV+LD + + DFG+ K ++ T GT +IAPE ++ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 297 RTDVFGYGIMLLELVTGQRAID 318
D + +G++L E++ GQ +
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 111 TDNFSEKNVLGQGGFGKVYR----GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
+D F ++ LG+G VYR G +K+ D + E+ ++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD------KKIVRTEIGVLLRL 105
Query: 167 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGL 226
H N+++L TPTE LV + + R+ E + + + A + L
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE-------KGYYSERDAADAVKQIL 158
Query: 227 E---YLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKLVDVRKTNVTTQVRGT 280
E YLHE+ I+HRD+K N+L D + DFGL+K+V+ + T V GT
Sbjct: 159 EAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGT 213
Query: 281 MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
G+ APE L D++ GI+ L+ G
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 77
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+DE V DFG AK V R T + GT
Sbjct: 138 VLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPE 190
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R A AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 121 GQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
QG + VL G VAVK+L+ F++ RE+ ++ H+N++ L+
Sbjct: 34 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN-VF 90
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR---GLEYLHEHCNPK 236
TP + L + Q++ + L + + + + +R++ + G+++LH +
Sbjct: 91 TPQKTLEEF---QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAG 144
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+++ D + DFGLA+ TN + T T + APE +
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 296 ERTDVFGYGIMLLELVTG 313
E D++ G ++ ELV G
Sbjct: 202 ENVDIWSVGCIMGELVKG 219
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 118 NVLGQGGFGKVYRGVLADGTKV-----AVKRLTDFESPGGDAAFQREVEMISVAVHRNLL 172
++LG+G +GKV + VL T +K+ P G+A ++E++++ H+N++
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 173 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR-------- 224
+L+ E+ +Y M+ ++E+ LD V KR + A
Sbjct: 70 QLVDVLYN-EEKQKMYMVMEYCVCG--MQEM------LDSVPEKRFPVCQAHGYFCQLID 120
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHI 284
GLEYLH I+H+D+K N+LL + G+A+ + + T +
Sbjct: 121 GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 285 APEYLSTGK---SSERTDVFGYGIMLLELVTG 313
P ++ G S + D++ G+ L + TG
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ ++F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKIL------------RKEVIIA 45
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V + R++ P L Y F + + + + GE + ++R+RV
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-LFFHLSRERVFTE 104
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA LEYLH +++RD+K N++LD+D + DFGL K +
Sbjct: 105 ERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGA 160
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLADGTK-VAVKRLTD-FESPGGDAAFQREVEMISVAVHR 169
DN+ K+++G+G +G VY + K VA+K++ FE RE+ +++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVA-YRLREIKPGEPVLDWVTRKRVALGAARGLEY 228
++RL P + L L +A L+++ L K + G ++
Sbjct: 88 YIIRLHDL-IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+HE IIHRD+K AN LL++D + DFGLA+ ++ K
Sbjct: 147 IHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ ++F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKIL------------RKEVIIA 45
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V + R++ P L Y F + + + + GE + ++R+RV
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-LFFHLSRERVFTE 104
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA LEYLH +++RD+K N++LD+D + DFGL K +
Sbjct: 105 ERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGA 160
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 222 AARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLAKLV--DVRKTNVTT--Q 276
A GLEYLH +I+H DVKA NVLL D A + DFG A + D ++ T
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ GT H+APE + + DV+ M+L ++ G
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ ++F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKIL------------RKEVIIA 45
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V + R++ P L Y F + + + + GE + ++R+RV
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-LFFHLSRERVFTE 104
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA LEYLH +++RD+K N++LD+D + DFGL K +
Sbjct: 105 ERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGA 160
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ ++F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKIL------------RKEVIIA 45
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V + R++ P L Y F + + + + GE + ++R+RV
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-LFFHLSRERVFTE 104
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA LEYLH +++RD+K N++LD+D + DFGL K +
Sbjct: 105 ERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGA 160
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 120 LGQGGFGKVYRGVLADGTK-VAVKRL-TDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 177
+G+G +G V++ + + VA+KR+ D + G ++ RE+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 178 CTTPTERLLVYPFM-QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
+ + LV+ F Q+L + + G+ LD K +GL + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYF---DSCNGD--LDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK-SS 295
++HRD+K N+L++ + E + +FGLA+ + + +V T+ + P+ L K S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 296 ERTDVFGYGIMLLELVTGQRAI 317
D++ G + EL R +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFG----LAKLVDVRKTNVTTQVRG 279
+ L YLH +IHRD+K+ ++LL D + DFG ++K V RK V G
Sbjct: 152 QALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-----G 203
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
T +APE +S + D++ GIM++E+V G+
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 108 QLATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
++ ++F +LG+G FGKV +L A G A+K L ++EV +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKIL------------RKEVIIA 48
Query: 164 SVAVHRNLL--RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-- 219
V + R++ P L Y F + + + + GE + ++R+RV
Sbjct: 49 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE-LFFHLSRERVFTE 107
Query: 220 -----LGA--ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 272
GA LEYLH +++RD+K N++LD+D + DFGL K +
Sbjct: 108 ERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGA 163
Query: 273 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
GT ++APE L D +G G+++ E++ G+
Sbjct: 164 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 223 ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
A L YLH I++RD+K N+LLD V+ DFGL K ++ + T+ GT
Sbjct: 149 ASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPE 204
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE L D + G +L E++ G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVH 168
TD++ LG+G F V R V T+ ++ + + S +RE + + H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA----- 223
N++RL + LV+ + GE D V R+ + A
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTG------------GELFEDIVAREYYSEADASHCIH 137
Query: 224 ---RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVR-KTNVTTQ 276
+ ++H+H I+HRD+K N+LL + + DFGLA ++V+ +
Sbjct: 138 QILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFG 192
Query: 277 VRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT G+++PE L + D++ G++L L+ G
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRGVLADGTK-VAVKRLTD-FESPGGDAAFQREVEMISVAV 167
DN+ K+++G+G +G VY + K VA+K++ FE RE+ +++
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVA-YRLREIKPGEPVLDWVTRKRVALGAARGL 226
++RL P + L L +A L+++ L K + G
Sbjct: 84 SDYIIRLYDLII-PDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE 142
Query: 227 EYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK-TNVTTQV 277
++HE IIHRD+K AN LL++D V DFGLA+ ++ K TN+ +
Sbjct: 143 NFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 91
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Query: 110 ATDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRL-TDFESPGGDAAFQREVEMISVAV 167
+ D + LG+G +G+VY+ + VA+KR+ + E G REV ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 168 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
HRN++ L L++ + +N L++ P + K G+
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN-----DLKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 228 YLHEHCNPKIIHRDVKAANVLL-----DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
+ H + +HRD+K N+LL E +GDFGLA+ + T ++ T+
Sbjct: 147 FCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLW 202
Query: 283 HIAPEYLSTGKS-SERTDVFGYGIMLLELV 311
+ PE L + S D++ + E++
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ V H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLN-VFTPQKSLEEF---QDVYIVMELMDANLSQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G+++ E++ G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 120 LGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
LGQG F K+++GV + T+V +K L D +F M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL-DKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ G C E +LV F++ S+ L++ K +L W + VA A + +L E
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHFLEE 131
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGH----IAPE 287
+ +IH +V A N+LL + + G+ KL D ++T + + + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-PGISITVLPKDILQERIPWVPPE 187
Query: 288 YLSTGKS-SERTDVFGYGIMLLELVTG 313
+ K+ + TD + +G L E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 217 RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNVTT 275
++A+ + LE+LH + +IHRDVK +NVL++ + + DFG++ LVD +
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 276 QVRGTMG--HIAPEYLSTGKSSERTDVFGYGIMLLEL 310
+ M I PE G S ++D++ GI ++EL
Sbjct: 215 GCKPYMAPERINPELNQKGYSV-KSDIWSLGITMIEL 250
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 120 LGQGGFGKVYRGV-----LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLR 173
LG+G F + V A K+ KR+ +A Q+E+ + + H N+++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRM--------EANTQKEITALKLCEGHPNIVK 70
Query: 174 LIGFCTTPTERLLVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVALGAARGLEYLHEH 232
L LV + + R+++ K E ++ RK V+ + ++H+
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHD- 124
Query: 233 CNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
++HRD+K N+L +++ E + DFG A+L + T T+ + APE L
Sbjct: 125 --VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELL 181
Query: 290 STGKSSERTDVFGYGIMLLELVTGQ 314
+ E D++ G++L +++GQ
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 16/116 (13%)
Query: 210 LDWVTRKRVALGAAR----GLEYLHEHCNPKIIHRDVKAANVLL--DEDFEAVVGDFGLA 263
LD+V R+++ R L YLH N I HRD+K N L ++ FE + DFGL+
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Query: 264 ----KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS--ERTDVFGYGIMLLELVTG 313
KL + +TT+ GT +APE L+T S + D + G++L L+ G
Sbjct: 218 KEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVK--RLTDFESPGGDAA--FQREVEMI 163
L D + V+G+G F V R + + G + AVK + F S G + +RE +
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
+ H +++ L+ ++ +V+ FM + + + + V
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVR-G 279
L Y H++ IIHRDVK VLL + +G FG+A + + ++ + R G
Sbjct: 141 EALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVG 195
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T +APE + + DV+G G++L L++G
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 120 LGQGGFGKV---YRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLI 175
+G G G V Y +L VA+K+L+ F++ RE+ ++ V H+N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 176 GFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR---GLEYLHEH 232
TP + L + Q++ + L + + + + +R++ + G+++LH
Sbjct: 90 N-VFTPQKSLEEF---QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH-- 143
Query: 233 CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG 292
+ IIHRD+K +N+++ D + DFGLA+ + + T T + APE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 293 KSSERTDVFGYGIMLLELVTG 313
E D++ G+++ E++ G
Sbjct: 201 GYKENVDIWSVGVIMGEMIKG 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 48/231 (20%)
Query: 115 SEKNVLGQGGFGKVYRGVLADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAV-HRNLL 172
SEK +LG G G V G VAVKR L DF D A E+++++ + H N++
Sbjct: 19 SEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALM-EIKLLTESDDHPNVI 72
Query: 173 RLIGFCTTPTERLLVYPF-MQNLSVAYRLREIKPGEPVLDWVTRKRVALGA-------AR 224
R +C+ T+R L + NL+ L+++ + V D + + A
Sbjct: 73 RY--YCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLD-------------EDFEAVVGDFGLAKLVDVRKT 271
G+ +LH + KIIHRD+K N+L+ E+ ++ DFGL K +D ++
Sbjct: 127 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 272 NVTTQVR---GTMGHIAPEYLSTGKS-------SERTDVFGYGIMLLELVT 312
+ T + GT G APE L + + D+F G + +++
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 217 RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNVTT 275
++A+ + LE+LH + +IHRDVK +NVL++ + + DFG++ LVD ++
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 276 QVRGTMG--HIAPEYLSTGKSSERTDVFGYGIMLLEL 310
+ M I PE G S ++D++ GI ++EL
Sbjct: 171 GCKPYMAPERINPELNQKGYSV-KSDIWSLGITMIEL 206
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 85
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R AR
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 146 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 198
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK---LVDVRKTNVTTQVRGT 280
RGL+Y+H + ++IHRD+K +N+L++E+ E +GDFG+A+ T+ T
Sbjct: 170 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 281 MGHIAPE-YLSTGKSSERTDVFGYGIMLLELVT 312
+ APE LS + ++ D++ G + E++
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 121 GQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
QG + VL G VAVK+L+ F++ RE+ ++ H+N++ L+
Sbjct: 36 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV-F 92
Query: 180 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR---GLEYLHEHCNPK 236
TP + L + Q++ + L + + + + +R++ + G+++LH +
Sbjct: 93 TPQKTLEEF---QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 237 IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSS 295
IIHRD+K +N+++ D + DFGLA+ TN + T T + APE + +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 296 ERTDVFGYGIMLLELVTG 313
D++ G ++ ELV G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 239 HRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERT 298
HRDVK N+L+ D A + DFG+A K GT+ + APE S ++ R
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 299 DVFGYGIMLLELVTGQ 314
D++ +L E +TG
Sbjct: 217 DIYALTCVLYECLTGS 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 109 LATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVK--RLTDFESPGGDAA--FQREVEMI 163
L D + V+G+G F V R + + G + AVK + F S G + +RE +
Sbjct: 23 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 82
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
+ H +++ L+ ++ +V+ FM + + + + V
Sbjct: 83 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVR-G 279
L Y H++ IIHRDVK VLL + +G FG+A + + ++ + R G
Sbjct: 143 EALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVG 197
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T +APE + + DV+G G++L L++G
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+++D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 119/288 (41%), Gaps = 48/288 (16%)
Query: 120 LGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
LGQG F K+++GV + T+V +K L ++ F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMSKLSHKHL 74
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE 231
+ G C E +LV F++ S+ L++ K +L W + VA A + +L E
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFLEE 131
Query: 232 HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGH----IAPE 287
+ +IH +V A N+LL + + G+ KL D ++T + + + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-PGISITVLPKDILQERIPWVPPE 187
Query: 288 YLSTGKS-SERTDVFGYGIMLLELVTGQ----RAIDFSRXXXXXXXXXXXXXXXXXREKR 342
+ K+ + TD + +G L E+ +G A+D R +
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--------------------K 227
Query: 343 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 390
L DR+ E+ +I C P+ RP+ ++R L
Sbjct: 228 LQFYEDRHQLPAPKAAELANLINN---CMDYEPDHRPSFRAIIRDLNS 272
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 111
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK R T + GT
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPE 224
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK---LVDVRKTNVTTQVRGT 280
RGL+Y+H + ++IHRD+K +N+L++E+ E +GDFG+A+ T+ T
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 281 MGHIAPE-YLSTGKSSERTDVFGYGIMLLELVT 312
+ APE LS + ++ D++ G + E++
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 111
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R AR
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 224
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ E+ G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++APE + + ++ D + G+++ ++ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVH 168
TD + +G+G F V R V L G + A K + + D +RE + + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-LGAARGLE 227
N++RL + LV+ + GE D V R+ + A+ ++
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTG------------GELFEDIVAREYYSEADASHCIQ 110
Query: 228 YLHE---HCNPK-IIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVR-KTNVTTQVRG 279
+ E HC+ ++HRD+K N+LL + + DFGLA ++V+ G
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAG 168
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T G+++PE L + D++ G++L L+ G
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ V H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLN-VFTPQKSLEEF---QDVYIVMELMDANLSQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ V H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLN-VFTPQKSLEEF---QDVYIVMELMDANLSQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+APE + + ++ D + G+++ E+ G
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 112 DNFSEKNVLGQGGFGKVYRGV-LADGTKVAVK-RLTDFESPGGDAAFQREVEMISVAVHR 169
D++ LG G FG V+R A G A K +T ES ++E++ +SV H
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHP 108
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
L+ L E +++Y FM G + + V + + +EY+
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMS-------------GGELFEKVADEHNKMSEDEAVEYM 155
Query: 230 --------HEHCNPKIIHRDVKAANVLL--DEDFEAVVGDFGLAKLVDVRKT-NVTTQVR 278
H H N +H D+K N++ E + DFGL +D +++ VTT
Sbjct: 156 RQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 211
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT APE TD++ G++ L++G
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 37/266 (13%)
Query: 119 VLGQGGFGKVYRGVLADGTKVA-------VKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
VLG+GG+GKV++ G +K+ + A + E ++ H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRL-RE-IKPGEPVLDWVTRKRVALGAARGLEYL 229
+ LI T + L+ ++ + +L RE I + ++ +ALG +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HL 137
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H+ II+RD+K N++L+ + DFGL K + VT GT+ ++APE L
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 290 STGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDR 349
+ D + G ++ +++TG A F+ R+K +D I+
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG--APPFT---------------GENRKKTIDKILKC 236
Query: 350 NLN-KNYNIQEVETMIQVALLCTQAS 374
LN Y QE +++ L AS
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNAAS 262
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 37/266 (13%)
Query: 119 VLGQGGFGKVYRGVLADGTKVA-------VKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
VLG+GG+GKV++ G +K+ + A + E ++ H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRL-RE-IKPGEPVLDWVTRKRVALGAARGLEYL 229
+ LI T + L+ ++ + +L RE I + ++ +ALG +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HL 137
Query: 230 HEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
H+ II+RD+K N++L+ + DFGL K + VT GT+ ++APE L
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 290 STGKSSERTDVFGYGIMLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDR 349
+ D + G ++ +++TG A F+ R+K +D I+
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG--APPFT---------------GENRKKTIDKILKC 236
Query: 350 NLN-KNYNIQEVETMIQVALLCTQAS 374
LN Y QE +++ L AS
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNAAS 262
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG------GDAAF--- 156
EL ++ + + G +G V GV ++G VA+KR+ + S G D+
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 157 -QREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
RE+ +++ H N+L L E P M L + L + + D
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHD---- 126
Query: 216 KRVALGAAR----------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK- 264
+R+ + GL LHE ++HRD+ N+LL ++ + + DF LA+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 265 -LVDVRKTNVTTQ 276
D KT+ T
Sbjct: 184 DTADANKTHYVTH 196
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMI-SVAVHRNLLRLIG 176
+LG+G + KV V L +G + AVK + F REVE + ++N+L LI
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF-REVETLYQCQGNKNILELIE 78
Query: 177 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK 236
F T LV+ +Q S+ +++ K + RV A L++LH
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRDVAAALDFLH---TKG 131
Query: 237 IIHRDVKAANVLLD--EDFEAV-VGDFGLAKLVDVRK--TNVTTQ----VRGTMGHIAPE 287
I HRD+K N+L + E V + DF L + + T +TT G+ ++APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 288 YLS--TGKSS---ERTDVFGYGIMLLELVTG 313
+ T +++ +R D++ G++L +++G
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 106 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG------GDAAF--- 156
EL ++ + + G +G V GV ++G VA+KR+ + S G D+
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 157 -QREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
RE+ +++ H N+L L E P M L + L + + D
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHD---- 126
Query: 216 KRVALGAAR----------GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK- 264
+R+ + GL LHE ++HRD+ N+LL ++ + + DF LA+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 265 -LVDVRKTNVTTQ 276
D KT+ T
Sbjct: 184 DTADANKTHYVTH 196
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 112 DNFSEKNVLGQGGFGKVYRGV-LADGTKVAVK-RLTDFESPGGDAAFQREVEMISVAVHR 169
D++ LG G FG V+R A G A K +T ES ++E++ +SV H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHP 214
Query: 170 NLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYL 229
L+ L E +++Y FM G + + V + + +EY+
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMS-------------GGELFEKVADEHNKMSEDEAVEYM 261
Query: 230 --------HEHCNPKIIHRDVKAANVLL--DEDFEAVVGDFGLAKLVDVRKT-NVTTQVR 278
H H N +H D+K N++ E + DFGL +D +++ VTT
Sbjct: 262 RQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 317
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT APE TD++ G++ L++G
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEF---QDVYIVMELMDANLSQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 158 REVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
E+ ++ H N+++L LV F + L E D
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYE----GGELFEQIINRHKFDECDAAN 150
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGDFGLAKLVDVRKTNVT 274
+ G+ YLH+H I+HRD+K N+LL+ + DFGL+ K
Sbjct: 151 IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSF--FSKDYKL 205
Query: 275 TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT +IAPE L K +E+ DV+ G+++ L+ G
Sbjct: 206 RDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 190 FMQNLSVAYRLREIKPGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAAN 246
F++ S++ E P + D++T + + + A+G+E+L + K IHRD+ A N
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 221
Query: 247 VLLDEDFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGI 305
+LL E + DFGLA+ + V R + +APE + + ++DV+ +G+
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 281
Query: 306 MLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE---- 361
+L E+ FS ++D R L + ++ +
Sbjct: 282 LLWEI--------FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTP 321
Query: 362 TMIQVALLCTQASPEDRPAMSEVVRML 388
M Q L C P RP SE+V L
Sbjct: 322 EMYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV 187
E++ +I + H N++ L+G CT P L+V
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 102
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 190 FMQNLSVAYRLREIKPGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAAN 246
F++ S++ E P + D++T + + + A+G+E+L K IHRD+ A N
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 223
Query: 247 VLLDEDFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGI 305
+LL E + DFGLA+ + V R + +APE + + ++DV+ +G+
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
Query: 306 MLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE---- 361
+L E+ FS ++D R L + ++ +
Sbjct: 284 LLWEI--------FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTP 323
Query: 362 TMIQVALLCTQASPEDRPAMSEVVRML 388
M Q L C P RP SE+V L
Sbjct: 324 EMYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV 187
E++ +I + H N++ L+G CT P L+V
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 112 DNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F LG G FG+V + G A+K L Q+ V++ + N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----------QKVVKLKQIEHTLN 90
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR------ 224
R++ P L + F N ++ + + GE R + AR
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG 282
EYLH + +I+RD+K N+L+D+ V DFG AK V R T + GT
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 283 HIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
++AP + + ++ D + G+++ E+ G
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 190 FMQNLSVAYRLREIKPGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAAN 246
F++ S++ E P + D++T + + + A+G+E+L K IHRD+ A N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 228
Query: 247 VLLDEDFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGI 305
+LL E + DFGLA+ + V R + +APE + + ++DV+ +G+
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 288
Query: 306 MLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE---- 361
+L E+ FS ++D R L + ++ +
Sbjct: 289 LLWEI--------FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTP 328
Query: 362 TMIQVALLCTQASPEDRPAMSEVVRML 388
M Q L C P RP SE+V L
Sbjct: 329 EMYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV 187
E++ +I + H N++ L+G CT P L+V
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 44/227 (19%)
Query: 115 SEKNVLGQGGFGKVYRGVLADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAV-HRNLL 172
SEK +LG G G V G VAVKR L DF D A E+++++ + H N++
Sbjct: 37 SEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALM-EIKLLTESDDHPNVI 90
Query: 173 RLIGFCTTPTERLLVYPF-MQNLSVAYRLREIKPGEPVLDWVTRKRVALGA-------AR 224
R +C+ T+R L + NL+ L+++ + V D + + A
Sbjct: 91 RY--YCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLD-------------EDFEAVVGDFGLAKLVDVRKT 271
G+ +LH KIIHRD+K N+L+ E+ ++ DFGL K +D +
Sbjct: 145 GVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 272 NVTTQVR---GTMGHIAPEYL--STGKSSERT-DVFGYGIMLLELVT 312
+ GT G APE L ST + R+ D+F G + +++
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 190 FMQNLSVAYRLREIKPGEPVLDWVTRKRV---ALGAARGLEYLHEHCNPKIIHRDVKAAN 246
F++ S++ E P + D++T + + + A+G+E+L K IHRD+ A N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 230
Query: 247 VLLDEDFEAVVGDFGLAKLVDVRKTNVTT-QVRGTMGHIAPEYLSTGKSSERTDVFGYGI 305
+LL E + DFGLA+ + V R + +APE + + ++DV+ +G+
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 290
Query: 306 MLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXXREKRLDAIVDRNLNKNYNIQEVE---- 361
+L E+ FS ++D R L + ++ +
Sbjct: 291 LLWEI--------FSLGASPYPGV------------KIDEEFCRRLKEGTRMRAPDYTTP 330
Query: 362 TMIQVALLCTQASPEDRPAMSEVVRML 388
M Q L C P RP SE+V L
Sbjct: 331 EMYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 102 YSWRELQLATDNFSEKNVLGQGGFGKVYR----GVLADGT--KVAVKRLTDFESPGGDAA 155
Y + + D LG+G FG+V G+ T VAVK L + + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 156 FQREVE-MISVAVHRNLLRLIGFCTTPTERLLV 187
E++ +I + H N++ L+G CT P L+V
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 44/227 (19%)
Query: 115 SEKNVLGQGGFGKVYRGVLADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAV-HRNLL 172
SEK +LG G G V G VAVKR L DF D A E+++++ + H N++
Sbjct: 37 SEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALM-EIKLLTESDDHPNVI 90
Query: 173 RLIGFCTTPTERLLVYPF-MQNLSVAYRLREIKPGEPVLDWVTRKRVALGA-------AR 224
R +C+ T+R L + NL+ L+++ + V D + + A
Sbjct: 91 RY--YCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLD-------------EDFEAVVGDFGLAKLVDVRKT 271
G+ +LH + KIIHRD+K N+L+ E+ ++ DFGL K +D +
Sbjct: 145 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 272 NVTTQVR---GTMGHIAPEYL--STGKSSERT-DVFGYGIMLLELVT 312
+ GT G APE L ST + R+ D+F G + +++
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
++YLHE+ IIHRD+K NVLL +ED + DFG +K++ +T++ + GT
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 319
Query: 282 GHIAPEYL---STGKSSERTDVFGYGIMLLELVTG 313
++APE L T + D + G++L ++G
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFE--SPGGDAAFQREVE 161
+E+QL ++F V+G+G FG+V + + ++ A+K L +E A F+ E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN---LSVAYRLREIKPGEPVLDWVTRKRV 218
++ + + L LV + L++ + + P + ++ +
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 219 ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR 278
A+ + L Y +HRD+K NVLLD + + DFG ++ T ++
Sbjct: 187 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 279 GTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQ 314
GT +I+PE L GK D + G+ + E++ G+
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
++YLHE+ IIHRD+K NVLL +ED + DFG +K++ +T++ + GT
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 305
Query: 282 GHIAPEYL---STGKSSERTDVFGYGIMLLELVTG 313
++APE L T + D + G++L ++G
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
++YLHE+ IIHRD+K NVLL +ED + DFG +K++ +T++ + GT
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 179
Query: 282 GHIAPEYL---STGKSSERTDVFGYGIMLLELVTG 313
++APE L T + D + G++L ++G
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
++YLHE+ IIHRD+K NVLL +ED + DFG +K++ +T++ + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 282 GHIAPEYL---STGKSSERTDVFGYGIMLLELVTG 313
++APE L T + D + G++L ++G
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
++YLHE+ IIHRD+K NVLL +ED + DFG +K++ +T++ + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 282 GHIAPEYL---STGKSSERTDVFGYGIMLLELVTG 313
++APE L T + D + G++L ++G
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEF---QDVYIVMELMDANLSQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
++YLHE+ IIHRD+K NVLL +ED + DFG +K++ +T++ + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 282 GHIAPEYL---STGKSSERTDVFGYGIMLLELVTG 313
++APE L T + D + G++L ++G
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFE--SPGGDAAFQREVE 161
+E+QL ++F V+G+G FG+V + + ++ A+K L +E A F+ E +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN---LSVAYRLREIKPGEPVLDWVTRKRV 218
++ + + L LV + L++ + + P + ++ +
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 219 ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR 278
A+ + L Y +HRD+K NVLLD + + DFG ++ T ++
Sbjct: 203 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 279 GTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQ 314
GT +I+PE L GK D + G+ + E++ G+
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM 281
++YLHE+ IIHRD+K NVLL +ED + DFG +K++ +T++ + GT
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 186
Query: 282 GHIAPEYL---STGKSSERTDVFGYGIMLLELVTG 313
++APE L T + D + G++L ++G
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 20 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 68
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 124
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 125 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 179
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 21 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 69
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 125
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 126 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 182
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
V V T + APE + E D++ G ++ E++ G
Sbjct: 183 MMVPFVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 32/220 (14%)
Query: 113 NFSEKNVLGQGGFGKVYRGVLADGTKVAVK--RLTDFESPGGDAAFQREVEMISVAVHRN 170
NF K L + G++++G G + VK ++ D+ + F E + + H N
Sbjct: 13 NFLTK--LNENHSGELWKGRW-QGNDIVVKVLKVRDWST-RKSRDFNEECPRLRIFSHPN 68
Query: 171 LLRLIGFCTTP--TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 228
+L ++G C +P L+ +M S+ L E V+D + AL ARG+ +
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAF 126
Query: 229 LHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTM---GHIA 285
LH P I + + +V++DED A + + DV+ + Q G M +A
Sbjct: 127 LHT-LEPLIPRHALNSRSVMIDEDMTARIS------MADVK---FSFQSPGRMYAPAWVA 176
Query: 286 PEYLSTGKSSERT-----DVFGYGIMLLELVTGQRAIDFS 320
PE L K E T D++ + ++L ELVT R + F+
Sbjct: 177 PEALQ--KKPEDTNRRSADMWSFAVLLWELVT--REVPFA 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 120 LGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVHRNLLRLIGF 177
LG+G F V R V + G + A K + + D +RE + + H N++RL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 178 CTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-LGAARGLEYLHE---HC 233
+ L++ + GE D V R+ + A+ ++ + E HC
Sbjct: 90 ISEEGHHYLIFDLVTG------------GELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 234 NPK-IIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL 289
+ ++HRD+K N+LL + + DFGLA V+ + GT G+++PE L
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVL 196
Query: 290 STGKSSERTDVFGYGIMLLELVTG 313
+ D++ G++L L+ G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 12 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 60
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCT---TPTERLLVYPFMQNLSVAYRLREIKPGEPVL 210
RE+ ++ H+N++ L+ T T E VY M+ + L ++ E L
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA--NLXQVIQME--L 116
Query: 211 DWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
D + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 117 DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-- 171
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCT---TPTERLLVYPFMQNLSVAYRLREIKPGEPVL 210
RE+ ++ H+N++ L+ T T E VY M+ + L ++ E L
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA--NLXQVIQME--L 123
Query: 211 DWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
D + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 37/222 (16%)
Query: 119 VLGQGGFGKVYRGV-LADGTKVAVK-----RLTDFESPGGDAAFQREVEMI----SVAVH 168
+LG+GGFG V+ G L D +VA+K R+ + EV ++ + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 228
++RL+ + T +LV L P + + D++T K LG +
Sbjct: 98 PGVIRLLDWFETQEGFMLV------------LERPLPAQDLFDYITEKG-PLGEGPSRCF 144
Query: 229 LHE------HCNPK-IIHRDVKAANVLLD-EDFEAVVGDFGLAKLVDVRKTNVTTQVRGT 280
+ HC+ + ++HRD+K N+L+D A + DFG L+ T GT
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGT 201
Query: 281 MGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSR 321
+ PE++S + + V+ GI+L ++V G I F R
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD--IPFER 241
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQR--------EVEM 162
+ +S + LG G FG V+ V + K V + E D + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 163 ISVAVHRNLLRLIG-FCTTPTERLLVYPFMQNLSV-AYRLREIKPGEPVLDWVTRKRVAL 220
+S H N+++++ F +L++ L + A+ R + EP+ ++ R+ V+
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS- 141
Query: 221 GAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGT 280
A G L + IIHRD+K N+++ EDF + DFG A ++ K T GT
Sbjct: 142 --AVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGT 192
Query: 281 MGHIAPEYL-STGKSSERTDVFGYGIMLLELV 311
+ + APE L +++ G+ L LV
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+ + T T + APE + E D++ G ++ E++ G
Sbjct: 179 SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVH 168
TD + LG+G F V R + + G + A K + + D +RE + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-LGAARGLE 227
N++RL + LV+ + GE D V R+ + A+ ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTG------------GELFEDIVAREYYSEADASHCIQ 110
Query: 228 YLHE---HCNPK-IIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVR-KTNVTTQVRG 279
+ E HC+ I+HRD+K N+LL + + DFGLA ++V+ G
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAG 168
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T G+++PE L + D++ G++L L+ G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 13 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 61
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 117
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 118 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 172
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 20 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 68
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 124
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 125 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 179
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 20 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 68
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 124
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 125 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 179
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 13 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 61
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 117
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 118 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 172
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCT---TPTERLLVYPFMQNLSVAYRLREIKPGEPVL 210
RE+ ++ H+N++ L+ T T E VY M+ + L ++ E L
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA--NLXQVIQME--L 123
Query: 211 DWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
D + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 12 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 60
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 116
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 117 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 171
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 18 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 66
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 122
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 123 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 177
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 178 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLN-VFTPQKTLEEF---QDVYLVMELMDANLXQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLN-VFTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-- 178
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKV-AVKRLTDFE--SPGGDAAFQREVE 161
++++L ++F V+G+G FG+V L + KV A+K L +E A F+ E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN---LSVAYRLREIKPGEPVLDWVTRKRV 218
++ + + L LV + L++ + + P E ++ +
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 219 ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR 278
A+ + L Y +HRD+K N+L+D + + DFG + T ++
Sbjct: 187 AIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 279 GTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQ 314
GT +I+PE L G+ D + G+ + E++ G+
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 48/231 (20%)
Query: 115 SEKNVLGQGGFGKVYRGVLADGTKVAVKR-LTDFESPGGDAAFQREVEMISVAV-HRNLL 172
SEK +LG G G V G VAVKR L DF D A E+++++ + H N++
Sbjct: 19 SEK-ILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALM-EIKLLTESDDHPNVI 72
Query: 173 RLIGFCTTPTERLLVYPF-MQNLSVAYRLREIKPGEPVLDWVTRKRVALGA-------AR 224
R +C+ T+R L + NL+ L+++ + V D + + A
Sbjct: 73 RY--YCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLD-------------EDFEAVVGDFGLAKLVDVRKT 271
G+ +LH + KIIHRD+K N+L+ E+ ++ DFGL K +D +
Sbjct: 127 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 272 NVTTQVR---GTMGHIAPEYLSTGKS-------SERTDVFGYGIMLLELVT 312
+ GT G APE L + + D+F G + +++
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 57 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 105
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 161
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 162 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 216
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 86/208 (41%), Gaps = 25/208 (12%)
Query: 113 NFSEKNVLGQGGFGKVYR-GVLADGTKVAVKR-LTDFESPGGDAAFQREV-EMISVAVHR 169
+F + LG G +G+V++ DG AVKR ++ F P A EV V H
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 170 NLLRL------IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
+RL G TE L P +Q A+ P V ++ +AL
Sbjct: 118 CCVRLEQAWEEGGILYLQTE--LCGPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALA-- 171
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGH 283
+LH ++H DVK AN+ L +GDFGL LV++ G +
Sbjct: 172 ----HLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRY 222
Query: 284 IAPEYLSTGKSSERTDVFGYGIMLLELV 311
+APE L G DVF G+ +LE+
Sbjct: 223 MAPELLQ-GSYGTAADVFSLGLTILEVA 249
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGD-AAFQREVEMISVAVH 168
TD + LG+G F V R + + G + A K + + D +RE + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVA-LGAARGLE 227
N++RL + LV+ + GE D V R+ + A+ ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTG------------GELFEDIVAREYYSEADASHCIQ 110
Query: 228 YLHE---HCNPK-IIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVR-KTNVTTQVRG 279
+ E HC+ I+HRD+K N+LL + + DFGLA ++V+ G
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAG 168
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T G+++PE L + D++ G++L L+ G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 217 RVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK-LVDVRKTNVTT 275
++A+ + LE+LH + +IHRDVK +NVL++ + DFG++ LVD ++
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 276 QVRGTMGHIAPE----YLSTGKSSERTDVFGYGIMLLEL 310
G + APE L+ S ++D++ GI +EL
Sbjct: 198 ---GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y VL VA+K+L+ F++
Sbjct: 57 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHA 105
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEF---QDVYLVMELMDANLCQVIQMEL 161
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 162 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 216
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 13 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 61
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 62 KRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 117
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 118 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 172
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
+ + T T + APE + E D++ G ++ E+V +
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 24 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 72
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 73 KRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 128
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 129 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-- 183
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELV 311
+ + T T + APE + E D++ G ++ E+V
Sbjct: 184 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 198 YRLREIKPGEPVLDWVTRKR---------VALGAARGLEYLHEHCNPKIIHRDVKAANVL 248
Y + E+ G +LD + R++ V + +EYLH ++HRD+K +N+L
Sbjct: 92 YVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNIL 148
Query: 249 -LDE--DFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYG 304
+DE + E++ + DFG AK + + T T +APE L D++ G
Sbjct: 149 YVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLG 207
Query: 305 IMLLELVTG 313
++L ++TG
Sbjct: 208 VLLYTMLTG 216
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
++ +N +G+G +G+V + + GT++ A K++ + D F++E+E++ H N+
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNI 85
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV--ALGAAR----- 224
+RL Y ++ + Y + E+ G + + V KRV AAR
Sbjct: 86 IRL-------------YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 132
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRG 279
+ Y H+ + HRD+K N L D + DFGLA K + T+V G
Sbjct: 133 LSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-G 187
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T +++P+ L G D + G+M+ L+ G
Sbjct: 188 TPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 114 FSEKNVLGQGGFGKVYRGVLADGTKV--AVKRLTDFESPGGDAAFQREVEMISVAVHRNL 171
++ +N +G+G +G+V + + GT++ A K++ + D F++E+E++ H N+
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNI 68
Query: 172 LRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRV--ALGAAR----- 224
+RL Y ++ + Y + E+ G + + V KRV AAR
Sbjct: 69 IRL-------------YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115
Query: 225 --GLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLVDVRKTNVTTQVRG 279
+ Y H+ + HRD+K N L D + DFGLA K + T+V G
Sbjct: 116 LSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-G 170
Query: 280 TMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
T +++P+ L G D + G+M+ L+ G
Sbjct: 171 TPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 17/129 (13%)
Query: 198 YRLREIKPGEPVLDWVTRKR---------VALGAARGLEYLHEHCNPKIIHRDVKAANVL 248
Y + E+ G +LD + R++ V + +EYLH ++HRD+K +N+L
Sbjct: 92 YVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNIL 148
Query: 249 -LDE--DFEAV-VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYG 304
+DE + E++ + DFG AK + + T T +APE L D++ G
Sbjct: 149 YVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLG 207
Query: 305 IMLLELVTG 313
++L +TG
Sbjct: 208 VLLYTXLTG 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
V T + APE + E D++ G ++ E+V +
Sbjct: 181 MMEPEVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 198 YRLREIKPGEPVLDWVTRKR---------VALGAARGLEYLHEHCNPKIIHRDVKAANVL 248
Y + E+ G +LD + R++ V + +EYLH ++HRD+K +N+L
Sbjct: 97 YLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNIL 153
Query: 249 -LDEDFEAV---VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYG 304
+DE + DFG AK + + T T +APE L E D++ G
Sbjct: 154 YVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLG 212
Query: 305 IMLLELVTG 313
I+L ++ G
Sbjct: 213 ILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 198 YRLREIKPGEPVLDWVTRKR---------VALGAARGLEYLHEHCNPKIIHRDVKAANVL 248
Y + E+ G +LD + R++ V + +EYLH ++HRD+K +N+L
Sbjct: 97 YLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNIL 153
Query: 249 -LDEDFEAV---VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYG 304
+DE + DFG AK + + T T +APE L E D++ G
Sbjct: 154 YVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLG 212
Query: 305 IMLLELVTG 313
I+L ++ G
Sbjct: 213 ILLYTMLAG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMG-- 282
G+ YLH++ I+H D+K N+LL + +GD + RK ++R MG
Sbjct: 143 GVYYLHQN---NIVHLDLKPQNILLSSIYP--LGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 283 -HIAPEYLSTGKSSERTDVFGYGIMLLELVT 312
++APE L+ + TD++ GI+ L+T
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT-DFESPGGD 153
F LKRY N QG Y +L VA+K+L+ F++
Sbjct: 19 TFTVLKRYQ---------NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 67
Query: 154 AAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWV 213
RE+ ++ H+N++ L+ TP + L + Q++ + L + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEF---QDVYIVMELMDANLCQVIQMEL 123
Query: 214 TRKRVALGAAR---GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
+R++ + G+++LH + IIHRD+K +N+++ D + DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
V T + APE + E D++ G ++ E+V +
Sbjct: 181 MMEPEVV--TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 267
G++Y+H + I+HRD+K AN L+++D V DFGLA+ VD
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 32/197 (16%)
Query: 133 LADGTKVAVK-----RLTDF-ESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERL 185
++D VA+K R++D+ E P G V + V+ ++RL+ + P +
Sbjct: 73 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 132
Query: 186 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE------HC-NPKII 238
L+ L +P + + D++T +R AL + + HC N ++
Sbjct: 133 LI------------LERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGVL 179
Query: 239 HRDVKAANVLLDED-FEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSER 297
HRD+K N+L+D + E + DFG L+ K V T GT + PE++ + R
Sbjct: 180 HRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 298 T-DVFGYGIMLLELVTG 313
+ V+ GI+L ++V G
Sbjct: 237 SAAVWSLGILLYDMVCG 253
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 108 QLATDNF---SEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMI 163
Q A ++F S+ +LG G FG+V++ A G K+A K + + E+ ++
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAK-IIKTRGMKDKEEVKNEISVM 140
Query: 164 SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 223
+ H NL++L + + +LV ++ + R+ + LD + +
Sbjct: 141 NQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QIC 197
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVL-LDEDFEAV-VGDFGLAKLVDVR---KTNVTTQVR 278
G+ ++H+ I+H D+K N+L ++ D + + + DFGLA+ R K N
Sbjct: 198 EGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF----- 249
Query: 279 GTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
GT +APE ++ S TD++ G++ L++G
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 112 DNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQ-REVEM---ISVA 166
D F + + GQG FG V G + G VA+K++ D F+ RE+++ ++V
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ------DPRFRNRELQIMQDLAVL 76
Query: 167 VHRNLLRLIGFCTTPTER-----------LLVYPFMQNLSVAYRLREIKPGEPVLDWVTR 215
H N+++L + T ER V + Y R++ P P+L V
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAP-PPILIKV-- 133
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVDVRKTNVT 274
R + LH + + HRD+K NVL++E D + DFG AK + + NV
Sbjct: 134 --FLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 275 TQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQ 314
+ + APE + + + D++ G + E++ G+
Sbjct: 191 YIC--SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 110 ATDNFS---------EKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGG-DAAFQR 158
+TD+FS +++VLG+G +V + L + AVK + + PG + R
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFR 59
Query: 159 EVEMI-SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
EVEM+ HRN+L LI F LV+ M+ S+ + + + + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR----HFNELEASV 115
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVR----- 269
V A L++LH N I HRD+K N+L + + + DFGL + +
Sbjct: 116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 270 -KTNVTTQVRGTMGHIAPEYLSTGKS-----SERTDVFGYGIMLLELVTG 313
T G+ ++APE + +R D++ G++L L++G
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 95 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH- 146
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + T+V + GT+ ++ PE +
Sbjct: 147 --GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 46/224 (20%)
Query: 112 DNFSEKNVLGQGGFGKVYR-GVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN 170
D F K LG G FG V+ + G + +K + S + E+E++ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 171 LLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARG----- 225
+++ ++ ++ Y + E G +L+ R+ ARG
Sbjct: 82 IIK-------------IFEVFEDYHNMYIVMETCEGGELLE-----RIVSAQARGKALSE 123
Query: 226 -------------LEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVR 269
L Y H ++H+D+K N+L + + DFGLA+L +
Sbjct: 124 GYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL--FK 178
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG 313
+T GT ++APE + + D++ G+++ L+TG
Sbjct: 179 SDEHSTNAAGTALYMAPEVFKRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 16 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 75 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH- 126
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + T+V + GT+ ++ PE +
Sbjct: 127 --GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 118 NVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIG 176
++LGQG V+RG G A+K + RE E++ H+N+++L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 177 F--CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEH 232
TT ++L+ F S+ L E G P +++ R +G G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLREN 131
Query: 233 CNPKIIHRDVKAANVL--LDEDFEAV--VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEY 288
I+HR++K N++ + ED ++V + DFG A+ ++ + V+ + GT ++ P+
Sbjct: 132 ---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDM 186
Query: 289 LSTG--------KSSERTDVFGYGIMLLELVTG 313
K D++ G+ TG
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 20 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 79 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH- 130
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + T+V + GT+ ++ PE +
Sbjct: 131 --GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 26/175 (14%)
Query: 156 FQREVEMISVAVHRNLLRLIGFCTTPT---ERLLVY--PFMQNLSVAYRLREIKPGEPVL 210
F E + + H N+L ++G C +P L+ + P+ +V + V+
Sbjct: 54 FNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF-----VV 108
Query: 211 DWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 270
D + AL ARG +LH P I + + +V +DED A + DV+
Sbjct: 109 DQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXTARIS------XADVKF 161
Query: 271 TNVTTQVRGTMGHIAPEYLSTGKSSERT-----DVFGYGIMLLELVTGQRAIDFS 320
+ + +APE L K E T D + + ++L ELVT R + F+
Sbjct: 162 SFQSPGRXYAPAWVAPEALQ--KKPEDTNRRSADXWSFAVLLWELVT--REVPFA 212
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 17 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 76 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH- 127
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + T+V + GT+ ++ PE +
Sbjct: 128 --GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 118 NVLGQGGFGKVYRG-VLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIG 176
++LGQG V+RG G A+K + RE E++ H+N+++L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 177 F--CTTPTERLLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEH 232
TT ++L+ F S+ L E G P +++ R +G G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLREN 131
Query: 233 CNPKIIHRDVKAANVL--LDEDFEAV--VGDFGLAK 264
I+HR++K N++ + ED ++V + DFG A+
Sbjct: 132 ---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 123 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH- 174
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + T+V + GT+ ++ PE +
Sbjct: 175 --GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 47/238 (19%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGV----LADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 166
++ F ++ +G+G F VY + K+A+K L P AA E++ ++VA
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA---ELQCLTVA 76
Query: 167 VHRNLLRLIGFCTTPTERLLV-YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARG 225
++ + + +C + +++ P++++ S L L + + L +
Sbjct: 77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKA 129
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLDEDFEA-VVGDFGLAKLVDVRKTNVTTQVR------ 278
L+ +H+ I+HRDVK +N L + + + DFGLA+ K + V+
Sbjct: 130 LKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQE 186
Query: 279 ---------------------GTMGHIAPEYLS-TGKSSERTDVFGYGIMLLELVTGQ 314
GT G APE L+ + D++ G++ L L++G+
Sbjct: 187 RCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 123 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG 175
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + T+V + GT+ ++ PE +
Sbjct: 176 ---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-----EDFEAV-VGDFGLAKLVDVR 269
K+++ GL+Y+H C IIH D+K NVL++ E+ + + D G A D
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
TN + Q R + +PE L D++ ++ EL+TG
Sbjct: 192 YTN-SIQTR---EYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 216 KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-----EDFEAV-VGDFGLAKLVDVR 269
K+++ GL+Y+H C IIH D+K NVL++ E+ + + D G A D
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 270 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 314
TN + Q R + +PE L D++ ++ EL+TG
Sbjct: 192 YTN-SIQTR---EYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 110 ATDNFS---------EKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGG-DAAFQR 158
+TD+FS +++VLG+G +V + L + AVK + + PG + R
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFR 59
Query: 159 EVEMI-SVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKR 217
EVEM+ HRN+L LI F LV+ M+ S+ + + + + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR----HFNELEASV 115
Query: 218 VALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV---VGDFGLAKLVDVR----- 269
V A L++LH N I HRD+K N+L + + + DF L + +
Sbjct: 116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 270 -KTNVTTQVRGTMGHIAPEYLSTGKS-----SERTDVFGYGIMLLELVTG 313
T G+ ++APE + +R D++ G++L L++G
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 179
+G+G +G VY+ DG L E G + RE+ ++ H N++ L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 180 TPTER--LLVYPFMQN---LSVAYRLREIKPGEPV-LDWVTRKRVALGAARGLEYLHEHC 233
+ +R L++ + ++ + + +PV L K + G+ YLH +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 234 NPKIIHRDVKAANVLL----DEDFEAVVGDFGLAKLVD--VRKTNVTTQVRGTMGHIAPE 287
++HRD+K AN+L+ E + D G A+L + ++ V T + APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 288 YLSTGKS-SERTDVFGYGIMLLELVTGQ 314
L + ++ D++ G + EL+T +
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 95 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQH- 146
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + V + GT+ ++ PE +
Sbjct: 147 --GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 120 LGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDA--AFQREVEMIS-VAVHRN-LLRLI 175
+G GG KV++ VL + ++ + + E +++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 176 GFCTTPTERLLVYPFMQ--NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC 233
+ T +Y M+ N+ + L++ K +P W RK + +H+H
Sbjct: 123 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP---W-ERKSYWKNMLEAVHTIHQHG 175
Query: 234 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR-GTMGHIAPEYLSTG 292
I+H D+K AN L+ + ++ DFG+A + T+V + G + ++ PE +
Sbjct: 176 ---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 293 KSSERT-----------DVFGYGIMLLELVTGQ 314
SS DV+ G +L + G+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 112 DNFSEKNVLGQGGFGKVYRGV-LADGTKVAVKRLTDFESPGGDAAFQREVEMI-SVAVHR 169
D++ LG+G + +V+ + + + KV VK L P +RE++++ ++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKNKIKREIKILENLRGGP 92
Query: 170 NLLRLIGFCTTPTERL--LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE 227
N++ L P R LV+ + N + + + D+ R + + L+
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFK------QLYQTLTDYDIRFYM-YEILKALD 145
Query: 228 YLHEHCNPKIIHRDVKAANVLLDEDFEAV-VGDFGLAKLVDV-RKTNVTTQVRGTMGHIA 285
Y H I+HRDVK NV++D + + + D+GLA+ ++ NV R G
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 199
Query: 286 PEYLSTGKSSERT-DVFGYGIMLLELV 311
PE L + + + D++ G ML ++
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 33/216 (15%)
Query: 111 TDNFSEKNVLGQGGFGKVYRGVLADGTK--VAVKRLTDFESPGGDAAFQREVEMISVAVH 168
+D + +G G FG V R + TK VAVK + D QRE+ H
Sbjct: 19 SDRYDFVKDIGSGNFG-VARLMRDKLTKELVAVKYIE--RGAAIDENVQREIINHRSLRH 75
Query: 169 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAAR---- 224
N++R TPT ++ + + R+ R + AR
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERI------------CNAGRFSEDEARFFFQ 123
Query: 225 ----GLEYLHEHCNPKIIHRDVKAANVLLDEDFEA--VVGDFGLAKLVDVRKTNVTTQVR 278
G+ Y H +I HRD+K N LLD + DFG +K + +T
Sbjct: 124 QLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-- 178
Query: 279 GTMGHIAPEYLSTGKSSER-TDVFGYGIMLLELVTG 313
GT +IAPE L + + DV+ G+ L ++ G
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEA--VVGDFGLAKLVDVRKTNVTTQVRGTMG 282
G+ Y H ++ HRD+K N LLD + DFG +K V + + V GT
Sbjct: 127 GVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK-ASVLHSQPKSAV-GTPA 181
Query: 283 HIAPEYLSTGKSSER-TDVFGYGIMLLELVTG 313
+IAPE L + + DV+ G+ L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 13/55 (23%)
Query: 206 GEPVLDWVTR-----------KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL 249
G +L W+ + K++ +GL+YLH C +IIH D+K N+LL
Sbjct: 128 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 13/55 (23%)
Query: 206 GEPVLDWVTR-----------KRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL 249
G +L W+ + K++ +GL+YLH C +IIH D+K N+LL
Sbjct: 112 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 164
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 22/223 (9%)
Query: 105 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLT---DFESPGGDAAFQREVE 161
+E++L D+F V+G+G F +V + +V ++ D G + F+ E +
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 162 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQN---LSVAYRLREIKPGEPVLDWVTRKRV 218
++ R + +L LV + L++ + E P E ++ +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 219 ALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVR 278
A+ + L Y +HRD+K N+LLD + DFG + T +
Sbjct: 174 AIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 279 GTMGHIAPEYLST-------GKSSERTDVFGYGIMLLELVTGQ 314
GT +++PE L G D + G+ E+ GQ
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEA--VVGDFGLAKLVDVRKTNVTTQVRGTMG 282
G+ Y H ++ HRD+K N LLD + DFG +K + +T GT
Sbjct: 127 GVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPA 181
Query: 283 HIAPEYLSTGKSSER-TDVFGYGIMLLELVTG 313
+IAPE L + + DV+ G+ L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 225 GLEYLHEHCNPKIIHRDVKAANVLLDEDFEA--VVGDFGLAKLVDVRKTNVTTQVRGTMG 282
G+ Y H ++ HRD+K N LLD + DFG +K + +T GT
Sbjct: 126 GVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPA 180
Query: 283 HIAPEYLSTGKSSER-TDVFGYGIMLLELVTG 313
+IAPE L + + DV+ G+ L ++ G
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Query: 224 RGLEYLHEHCNPKIIHRDVKAANVLL 249
+GL+YLH C KIIH D+K N+L+
Sbjct: 151 QGLDYLHSKC--KIIHTDIKPENILM 174
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 14/158 (8%)
Query: 95 AFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGD 153
A G RY T F E +G G FG V++ V DG A+KR + D
Sbjct: 2 AMGMKSRY--------TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD 53
Query: 154 AAFQ-REVEMISV-AVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLD 211
REV +V H +++R L+ + S+A + E
Sbjct: 54 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK 113
Query: 212 WVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL 249
K + L RGL Y+H + ++H D+K +N+ +
Sbjct: 114 EAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLD--EDFEAVVGDFGLA 263
LEY+HEH + +H D+KA+N+LL+ + + D+GLA
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLD--EDFEAVVGDFGLA 263
LEY+HEH + +H D+KA+N+LL+ + + D+GLA
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 226 LEYLHEHCNPKIIHRDVKAANVLLD--EDFEAVVGDFGLA 263
LEY+HEH + +H D+KA+N+LL+ + + D+GLA
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,724,180
Number of Sequences: 62578
Number of extensions: 441704
Number of successful extensions: 3581
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 1137
Number of HSP's gapped (non-prelim): 1235
length of query: 437
length of database: 14,973,337
effective HSP length: 102
effective length of query: 335
effective length of database: 8,590,381
effective search space: 2877777635
effective search space used: 2877777635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)