Your job contains 1 sequence.
>013752
MIVLSLAFKGRCVKPIVLAVSLFICRWVFVFLQFLGDHLSVECFEQEFINTGALRFEFEE
EDEEGPQFTTTPSLEDKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVSPFM
PEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQ
PNSDSVINITHPPQQQIRAKQSQFSKSPPITREKRKRKRTKPIKNKEEVESQRMTHIAVE
RNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRMGTT
SAATLEGCDSATSTTTTTTTTDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVI
HNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKIEEDCKLGSA
EEIAAAVHQIFSYINGS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013752
(437 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 487 3.3e-53 2
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 260 3.1e-45 2
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 250 1.1e-42 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 435 5.9e-41 1
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 419 2.9e-39 1
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 405 8.9e-38 1
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 392 2.1e-36 1
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 381 3.1e-35 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 220 8.5e-35 2
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 358 8.5e-33 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 336 1.8e-30 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 222 5.8e-28 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 214 6.1e-28 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 279 2.0e-24 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 277 3.3e-24 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 183 6.2e-23 2
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 161 6.4e-21 2
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 186 2.9e-20 2
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 181 3.0e-19 2
UNIPROTKB|Q6Z7U5 - symbol:P0471A11.43 "Putative uncharact... 189 2.7e-14 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 91 4.0e-06 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 94 5.5e-06 3
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 133 1.4e-05 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 97 5.2e-05 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 108 9.6e-05 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 100 0.00017 3
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 101 0.00022 2
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 104 0.00089 2
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 487 (176.5 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 107/209 (51%), Positives = 133/209 (63%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
EVE+QRMTHIAVERNRRRQMN+HLN+LRSLMPP+++QRGDQASI+GGAIDF+K
Sbjct: 109 EVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQ 168
Query: 288 XXXXXKRMRMGTTSAATLEGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIGNCEEKMKAE 347
KR + GT C S+ S++ S+S +
Sbjct: 169 SLEAEKR-KDGTDETPKTASCSSSSSLACTN--------SSISSVSTTSENGFTARFGGG 219
Query: 348 SKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSF 407
D E+E VI NHV+LK+ C R Q+LKAIV++E+L+L LHL I+SS V YSF
Sbjct: 220 ---DTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSF 276
Query: 408 NLKIEEDCKLGSAEEIAAAVHQIFSYING 436
NLK+E+ CKLGSA+EIA AVHQIF ING
Sbjct: 277 NLKMEDGCKLGSADEIATAVHQIFEQING 305
Score = 81 (33.6 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 67 QFTTTPSLEDKMPFLQMLQSVGTPSVFPFKEPN--FQTLLRLQHLK 110
Q + T ++E+K+PFLQMLQ + P F EPN Q+LL++Q L+
Sbjct: 16 QISDT-TMEEKIPFLQMLQCIEHP--FTTTEPNQFLQSLLQIQTLE 58
Score = 76 (31.8 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 97 EPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQALEFESCVTQETLDLHSPVKLETKDLQ 156
E L LQ ++ P+ P QIQ LE +SC+T ET P + + + +
Sbjct: 23 EEKIPFLQMLQCIEHPFTTTEPNQFLQSLLQIQTLESKSCLTLETNIKRDPGQTDDPE-K 81
Query: 157 NPHSVTSCIEGLSSESNQEHIQVQPNSDSVIN--ITHPPQQQIRAKQ 201
+P + + + + ++ + N D V N +TH ++ R +Q
Sbjct: 82 DPRTENGAVT-VKEKRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQ 127
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 260 (96.6 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 59/107 (55%), Positives = 76/107 (71%)
Query: 326 LSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALE 385
L N+ S ++ N EE+ SKL +IE VI +HVNLKI C R+ GQLL++I+ LE
Sbjct: 270 LRNI-SSNKLRASNKEEQ---SSKL---KIEATVIESHVNLKIQCTRKQGQLLRSIILLE 322
Query: 386 DLRLTFLHLNITS-SETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIF 431
LR T LHLNITS + T+V YSFNLK+E++C LGSA+EI AA+ QIF
Sbjct: 323 KLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEITAAIRQIF 369
Score = 256 (95.2 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 78/217 (35%), Positives = 112/217 (51%)
Query: 73 SLEDKMPFL--QMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPWELVS---P-FMPEME-E 125
++ED F + Q + TPS+ ++ L LQ + P +S P F+ + +
Sbjct: 41 TVEDHQSFALEEEEQQLSTPSLL--QDTTIPFLQMLQQSEDPSPFLSFKDPSFLALLSLQ 98
Query: 126 TQIQALEFESCVTQETLDLHSPVKLETKDL-QNPHSVTSCIEGLSSE-SNQEHIQVQPNS 183
T + E E+ + E + HSP+ ET NP +EG++ SNQE + P
Sbjct: 99 TLEKPWELENYLPHEVPEFHSPIHSETNHYYHNPS-----LEGVNEAISNQE-LPFNPLE 152
Query: 184 DSVINITHPPQQQIRAKQSQFSKSPXXXXXXXXXXXXXXXXXXXEVESQRMTHIAVERNR 243
++ + R K+ + + E+ESQRMTHIAVERNR
Sbjct: 153 NA----------RSRRKRKNNNLASLMTREKRKRRRTKPTKNIEEIESQRMTHIAVERNR 202
Query: 244 RRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
RRQMN HLN+LRS++P +Y+QRGDQASI+GGAIDFVK
Sbjct: 203 RRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVK 239
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 250 (93.1 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 49/79 (62%), Positives = 64/79 (81%)
Query: 354 EIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNIT-SSETTVHYSFNLKIE 412
+IE VI NHV+LK+ C ++ GQLLK I++LE L+LT LHLNIT SS ++V YSFNLK+E
Sbjct: 275 KIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKME 334
Query: 413 EDCKLGSAEEIAAAVHQIF 431
++C L SA+EI AAVH+IF
Sbjct: 335 DECDLESADEITAAVHRIF 353
Score = 245 (91.3 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 78/250 (31%), Positives = 122/250 (48%)
Query: 72 PSLEDKMPFLQMLQSVGTPSV--FPFKEPNFQTL------LRLQHLKKP---WELVSP-F 119
P D+ P ++ L+ G F FKE ++L L++ + P + + P F
Sbjct: 10 PCFFDRKPDVRSLEVQGFAEAQSFAFKEKEEESLQDTVPFLQMLQSEDPSSFFSIKEPNF 69
Query: 120 MPEME-ETQIQALEFESCVTQETLDLHSPVKLET-KDLQNPHSVTSCIEGLSSESNQE-- 175
+ + +T + E E ++ E HSPV+ ET + ++ + S E S++N
Sbjct: 70 LTLLSLQTLKEPWELERYLSLEDSQFHSPVQSETNRFMEGANQAVSSQEIPFSQANMTLP 129
Query: 176 ---HIQVQPNSDSVINITHP-PQQQIRAKQSQFSKSPXXXXXXXXXXXXXXXXXXXEVES 231
+ +S I H PQ+ R K+ + P E+E+
Sbjct: 130 SSTSSPLSAHSRRKRKINHLLPQEMTREKRKRRKTKPSKNNE--------------EIEN 175
Query: 232 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXXXXXX 291
QR+ HIAVERNRRRQMN+H+N+LR+L+PP+Y+QRGDQASI+GGAI++VK
Sbjct: 176 QRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES 235
Query: 292 XKRMRMGTTS 301
KR + + S
Sbjct: 236 QKRTQQQSNS 245
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 127/372 (34%), Positives = 188/372 (50%)
Query: 75 EDKMPFLQMLQSVGTPSVF---PFKEPNFQTLLRLQHLKKPWELVSPFMPEMEETQIQAL 131
+ K Q Q +PS F PF + NF +++ L + +ET I +
Sbjct: 37 QQKQSMPQQQQHQLSPSGFGATPFDKMNFSDVMQFADFGSKLALNQTRNQDDQETGIDPV 96
Query: 132 EF-ESCVTQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVI-NI 189
F + V + ++ H+ +T+ L H + EG N ++ ++ D N
Sbjct: 97 YFLKFPVLNDKIEDHN----QTQHLMPSHQTSQ--EGGECGGNIGNVFLEEKEDQDDDND 150
Query: 190 THPPQQQIRA--KQSQFSKSPXXXXXXXXXXXXXXXXXXXEVESQRMTHIAVERNRRRQM 247
+ Q + ++ + +K+ EVESQRMTHIAVERNRR+QM
Sbjct: 151 NNSVQLRFIGGEEEDRENKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQM 210
Query: 248 NDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXXXXXXXKRMR-MGTTSA-ATL 305
N+HL LRSLMP +YVQRGDQASIIGGAI+FV+ KR R +G T T
Sbjct: 211 NEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTT 270
Query: 306 EGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIGNCEEKMKAESKLDGAEIEVIVIHNHVN 365
S+ I++ +++ E G + AE+K A++EV ++
Sbjct: 271 TTTSSSSPITTVANQAQPLIITG--NVTELEGGGGLREETAENKSCLADVEVKLLGFDAM 328
Query: 366 LKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKIEEDCKLGSAEEIAA 425
+KI RRPGQL+K I ALEDL L+ LH NIT+ E TV YSFN+KI + + +AE+IA+
Sbjct: 329 IKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITSETRF-TAEDIAS 387
Query: 426 AVHQIFSYINGS 437
++ QIFS+I+ +
Sbjct: 388 SIQQIFSFIHAN 399
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 94/215 (43%), Positives = 123/215 (57%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
EVESQRMTHIAVERNRR+QMN++L LRSLMPP+Y QRGDQASI+GGAI+FVK
Sbjct: 128 EVESQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINFVKELEQLLQ 187
Query: 288 XXXXXKRMRMGTTSAATLEGCDSAXXXXXXXXXXDKA--------ILSNVYSMSRPEIGN 339
K R A A A +++ ++ G
Sbjct: 188 SLEARKSSRQCAAHDAAAAAAPFASFFTFPQYSMSAAAAAAPVAPVVNELHGRDDGGAGT 247
Query: 340 CEEKMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSS 399
E + A++EV ++ +H NL++ RRP QLL+ +VAL+ RLT LHLN+TS+
Sbjct: 248 AEAEASGSKPSAVADVEVTMVESHANLRVLSRRRPRQLLRLVVALQGHRLTVLHLNMTSA 307
Query: 400 ETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIFSYI 434
V YSF+LK+E+DC+L S +EIA A HQI I
Sbjct: 308 GHMVLYSFSLKVEDDCQLTSVDEIATAAHQIIEKI 342
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 99/215 (46%), Positives = 124/215 (57%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
E+E QRMTHIAVERNRRRQMN++L LRSLMP +Y QRGDQASI+GGAI++VK
Sbjct: 105 EIECQRMTHIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQ 164
Query: 288 XXXXXKRM--RMGTTSAA---TLEGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIGNCEE 342
K + R G AA G S A S S S + +
Sbjct: 165 SLEVQKSLKNRSGAMDAAGDSPFAGFFSFPQYSTSPRTGCSAAASAGSSGSASSVVMDDT 224
Query: 343 KMKAESKLDGA---EIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSS 399
AES A +IEV ++ H +LK+ RRP QLLK +V L+ LR+ LHLN+T+
Sbjct: 225 AGSAESGRQSAAIADIEVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTV 284
Query: 400 ETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIFSYI 434
+ V YSF+LK+E+D KLGS E+IA AVHQI I
Sbjct: 285 DAMVLYSFSLKVEDDSKLGSVEDIATAVHQILGSI 319
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 94/217 (43%), Positives = 123/217 (56%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
EVESQRMTHIAVERNRR+QMN++L LRSLMP +YVQRGDQASIIGGAI++VK
Sbjct: 134 EVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQ 193
Query: 288 XXXXXKRMRMGTTSAA---------TLEGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIG 338
+ R T AA T + A N +++ G
Sbjct: 194 SLEAHRHARRARTDAAAALPFAGFFTFPQYSMSAVPTTTTTTVAAAATENGNAVAGAGAG 253
Query: 339 NCEEKMKAESKLDG-AEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNIT 397
+ + + SK A+IEV ++ +H NLK+ RRP QLL+ + L+ RL LHLN+
Sbjct: 254 DDADADVSGSKPSSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVA 313
Query: 398 SSETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIFSYI 434
S+ YS +LK+EEDC+L S ++IAAAVH I I
Sbjct: 314 SAGHMALYSLSLKVEEDCQLTSVDDIAAAVHGIVETI 350
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 88/207 (42%), Positives = 123/207 (59%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
E+E+QRMTHIAVERNRR+QMN++L LRSLMPP Y QRGDQASI+GGAI+++K
Sbjct: 119 EIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQ 178
Query: 288 XXXXXKRMRMGTTSAATLEGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIGNCEEKMKAE 347
+ T A G D S+ ++ P+ N A
Sbjct: 179 SMEPPVKTATEDTGA----GHDQTKTTSASSSGP----FSDFFAF--PQYSNRPTSAAAA 228
Query: 348 SKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSF 407
+ AEIEV ++ +H +LKI +RP QLLK + +++ LRLT LHLN+T+ + +V YS
Sbjct: 229 EGM--AEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSI 286
Query: 408 NLKIEEDCKLGSAEEIAAAVHQIFSYI 434
++K+EE +L + E+IAAAV+QI I
Sbjct: 287 SVKVEEGSQLNTVEDIAAAVNQILRRI 313
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 220 (82.5 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
E E+QRMTHIAVERNRRRQMN++L LRSLMP YVQRGDQASI+GGAI+FVK
Sbjct: 84 ETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVK 136
Score = 216 (81.1 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 39/92 (42%), Positives = 65/92 (70%)
Query: 344 MKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTV 403
+++E + A+IEV ++ H ++++ PRRPGQLLK I L+ LRLT LHLN+T+ ++ V
Sbjct: 250 LQSEHRSGLADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLV 309
Query: 404 HYSFNLKIEEDCKLGSAEEIAAAVHQIFSYIN 435
Y+ ++K+EE C L + ++IAAAVH + ++
Sbjct: 310 LYTLSVKVEEGCSLTTVDDIAAAVHHVLCIVD 341
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 84/202 (41%), Positives = 116/202 (57%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
E+E+QRMTHIAVERNRR+QMN++L LRSLMP +Y QRGDQASI+GGAI++VK
Sbjct: 109 EIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHIL- 167
Query: 288 XXXXXKRMRMGTTSAATLEGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIGNCEEKMKAE 347
+ M T +G D D S P+ E
Sbjct: 168 -----QSMEPKRTRTHDPKG-DKTSTSSLVGPFTD--------FFSFPQYSTKSSSDVPE 213
Query: 348 SKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSF 407
S AEIEV V +H N+KI ++P QLLK I +L+ LRLT LHLN+T+ ++ YS
Sbjct: 214 SSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSI 273
Query: 408 NLKIEEDCKLGSAEEIAAAVHQ 429
++++EE +L + ++IA A++Q
Sbjct: 274 SVRVEEGSQLNTVDDIATALNQ 295
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 80/218 (36%), Positives = 109/218 (50%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
E E+QRMTHIAVERNRRRQMN HL+ LRSLMP + +GDQASI+GGAIDF+K
Sbjct: 82 EAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLL 141
Query: 288 XXXXXKRMRMGTTSAATLEGCDSAXXXXXXXXXXDKAILSNVYSMSRPEIGNCEEKMKAE 347
K + T + LS + S +
Sbjct: 142 SLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNGSTSS 201
Query: 348 SKLDGAEIEVIVIHNHVNLKIHCPRR-----------PGQLLKAIVALEDLRLTFLHLNI 396
K ++EV +I H N++I RR P QL K + +L+ L L+ LHL++
Sbjct: 202 VKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILHLSV 261
Query: 397 TSSETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIFSYI 434
T+ + YS + K+EE C+L S ++IA AVH + S I
Sbjct: 262 TTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSII 299
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 222 (83.2 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
+ ESQRMTHIAVERNRRRQMN++L LRSLMP +YV RGDQASI+GGAIDFVK
Sbjct: 89 DAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVK 141
Score = 147 (56.8 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 346 AESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHY 405
AE++ A+IEV ++ H ++++ RRPGQLLK + L+ LRLT LHLN+T+ + Y
Sbjct: 228 AENRAGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALY 287
Query: 406 SFNLK 410
S ++K
Sbjct: 288 SISVK 292
Score = 65 (27.9 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 379 KAIVALEDLRLTFLHLNITSSETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIFSYIN 435
KAI +L L + FL TTV +EE C + + ++IAAAVH + I+
Sbjct: 298 KAIASLGPLGVFFLCALYLWYSTTV-------VEEGCGMATVDDIAAAVHHVLCIID 347
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 214 (80.4 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 44/84 (52%), Positives = 55/84 (65%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXX 287
E E+QRMTHIAVERNRRR MNDHL +LRSL+P Y+ RGDQA+++GGAID+VK
Sbjct: 111 EAENQRMTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLV 170
Query: 288 X--XXXXKRMRMGTTSAATLEGCD 309
+R +G +AA D
Sbjct: 171 ALQAAAAERSGVGVVAAAATAASD 194
Score = 122 (48.0 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 352 GAEIEVIV-IHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITS-SETTVHYSFNL 409
G ++E + HV +++ R G+L++A+ A+EDLRLT LHL +TS V Y FNL
Sbjct: 213 GVDVEATAAVGGHVRVRVAGRRWTGRLVRAVAAMEDLRLTVLHLAVTSVGHDAVVYCFNL 272
Query: 410 KIE 412
K++
Sbjct: 273 KVK 275
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 77/202 (38%), Positives = 103/202 (50%)
Query: 234 MTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXXXXXXXK 293
M+HIAVERNRRRQMN+HL +LRSL P Y++RGDQASIIGG I+F+K K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 294 RMR-MGTTSAATLEGCDSAXXXXXXXXXXDKAILSNVYSMSR-PEIGNCEEKMKA--ESK 349
R + + S + + NV + S E+G C A E+K
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 350 LDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNL 409
+ G+ + + V+ + GQL+K I LE L LHLNI+S E TV Y F +
Sbjct: 121 ISGSNVVLRVVSRRI---------VGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVV 171
Query: 410 KIEEDCKLGSAEEIAAAVHQIF 431
KI +C L S EE+ V + F
Sbjct: 172 KIGLECHL-SLEELTLEVQKSF 192
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 86/216 (39%), Positives = 111/216 (51%)
Query: 234 MTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXXXXXXXK 293
M+HIAVERNRRRQMNDHL LRSL P Y++RGDQASIIGGAIDF+K K
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 294 RMRMGTT----SAATLE----GCDSAXXXXXXXXXX---DKAILSNVYSMSR--PEIGNC 340
+ R S A++ G S A S+ S S P+ N
Sbjct: 61 KRRQQPQAHLISPASISASGGGSPSPTPSPRSLITSCSPTAAAGSSAGSSSSISPKDENK 120
Query: 341 EE-KMKAE----SKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLN 395
++ ++ AE A++E + +V L+ R P ++ I LE L L LHLN
Sbjct: 121 QQLQLVAELAACCNSPMADVEARISGANVLLRTLSRRAPP--VRIIALLESLHLEVLHLN 178
Query: 396 ITSSETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIF 431
IT+ + TV YSF LKI DC L S +++A VHQ F
Sbjct: 179 ITTMDDTVLYSFVLKIGLDCHL-SVDDLAMEVHQSF 213
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 183 (69.5 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 232 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFV 279
Q+M+H+ VERNRR+QMN+HL LRSLMP YV+RGDQASIIGG ++++
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYI 147
Score = 147 (56.8 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 41/106 (38%), Positives = 60/106 (56%)
Query: 331 SMSRPEIGNCEE-----KMKAESKLDGAEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALE 385
S S P + + E ++ A SK A++EV +V LK + PGQ++K I ALE
Sbjct: 259 SSSSPSVSSNHESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALE 318
Query: 386 DLRLTFLHLNITSSETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIF 431
DL L L +NI + + T+ SF +KI +C+L SAEE+A + Q F
Sbjct: 319 DLALEILQVNINTVDETMLNSFTIKIGIECQL-SAEELAQQIQQTF 363
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 161 (61.7 bits), Expect = 6.4e-21, Sum P(2) = 6.4e-21
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 230 ESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
E+QRM HIAVERNRR+QMN L+ L+S+MP +Y Q DQASII G I ++K
Sbjct: 98 ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLK 148
Score = 148 (57.2 bits), Expect = 6.4e-21, Sum P(2) = 6.4e-21
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 353 AEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKIE 412
A++EV ++ H N+K+ +P L K I L L+ LHLN+T+S+ ++F++K+E
Sbjct: 210 ADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVE 269
Query: 413 EDCKLG-SAEEIAAAVHQI 430
DC+L S E+A VH++
Sbjct: 270 ADCQLTPSGNEVANTVHEV 288
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 186 (70.5 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 233 RMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
+M+HI VERNRR+QMN+HL LRSLMP YV+RGDQASIIGG +D++K
Sbjct: 131 KMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIK 178
Score = 121 (47.7 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 366 LKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKIEEDCKLGSAEEIAA 425
LK R PGQ LK I ALE L L LH++I + + SF +KI +C+L SAEE+
Sbjct: 350 LKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKIGIECEL-SAEELVQ 408
Query: 426 AVHQIF 431
+ Q F
Sbjct: 409 EIQQTF 414
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 181 (68.8 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 152 TKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINITHPPQQQIRAKQSQFSKSPXXX 211
T L +P + +CI G+ N + + +P + + T+ +++
Sbjct: 53 TTTLGSPIAAAACISGVVGGQNHQQLP-EPAAAKTVPATNNKRREEEVADRDGDGDDDDG 111
Query: 212 XXXXXXXXXXXXXXXXEVESQ---RMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQ 268
+V + + HIAVERNRR+QMN++L LRSLMP YV+RGDQ
Sbjct: 112 SPQKRRKCCSPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQ 171
Query: 269 ASIIGGAIDFVK 280
ASIIGG +D++K
Sbjct: 172 ASIIGGVVDYIK 183
Score = 116 (45.9 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 366 LKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKIEEDCKLGSAEEIAA 425
LK R PGQ +K I ALE L LH I++ + T SF +KI +C+L SAEE+
Sbjct: 331 LKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVNSFTVKIGIECEL-SAEELVQ 389
Query: 426 AVHQIFS 432
+ Q F+
Sbjct: 390 VIQQTFT 396
>UNIPROTKB|Q6Z7U5 [details] [associations]
symbol:P0471A11.43 "Putative uncharacterized protein
P0471A11.43" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634 EMBL:AP004814
Gramene:Q6Z7U5 Uniprot:Q6Z7U5
Length = 83
Score = 189 (71.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 37/76 (48%), Positives = 57/76 (75%)
Query: 362 NHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSS-ETTVHYSFNLKIEEDCKLGSA 420
+H N+++ PRRP QLL+ +VAL+ L LT LHLN+T++ + YSF+LK+E++C+L S
Sbjct: 4 SHANVRVLAPRRPRQLLRMVVALQCLGLTVLHLNVTTTADHLALYSFSLKMEDECRLSSV 63
Query: 421 EEIAAAVHQIFSYING 436
+EIA AV+Q+ + I G
Sbjct: 64 DEIAGAVNQMVTKIAG 79
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 91 (37.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 339 NCEEKMKAESKLDGA-EIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNIT 397
+C+E G EIE V V +KIHC R G L+ A+ +E + LT ++ N+
Sbjct: 262 SCDENFDGGEATAGLPEIEARVSERTVLVKIHCENRKGALITALSEVETIGLTIMNTNVL 321
Query: 398 S-SETTVHYSFNLKIEEDCKLGSAEEIAAAVHQIF 431
+ +++ + E+ L S ++I ++Q F
Sbjct: 322 PFTSSSLDITIMATAGENFSL-SVKDIVKKLNQAF 355
Score = 88 (36.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 35/154 (22%), Positives = 61/154 (39%)
Query: 133 FESCVTQE--TLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQPNSDSVINIT 190
++SC+T++ D SP L H+ + +S Q P
Sbjct: 80 WDSCITEQGSPADSSSPTILSF----GGHADAAAAAAFASAGQA---QSAPYYGGASAAA 132
Query: 191 HPPQQQIRAKQSQFSKS-PXXXXXXXXXXXXXX---XXXXXEVESQRMTHIAVERNRRRQ 246
P+Q++ A + FS++ P SQ HI ER RR +
Sbjct: 133 LKPKQELDAAAAPFSQARPVKRSYDAMVAADVAKAPAAAASRPASQNQEHILAERKRREK 192
Query: 247 MNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
++ L ++P +++ D+AS++G AI +VK
Sbjct: 193 LSQRFIALSKIVPG--LKKMDKASVLGDAIKYVK 224
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 94 (38.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 234 MTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFV 279
++H+ ER RR ++N+ TLRS++P +V + D+ SI+G I +V
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYV 405
Score = 86 (35.3 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 354 EIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRL--TFLHLNITSSETTVHYSFNLKI 411
E+EV +I N V L++ C R G LL + L +L + T +H ++ + + ++
Sbjct: 437 EVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVNDHD----FEAEIRA 492
Query: 412 EEDCKLGSAEEIAAAVHQI 430
+ K S E+ A+HQ+
Sbjct: 493 KVRGKKASIAEVKRAIHQV 511
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 138 TQETLDLHSPVKLETKDLQNPHSVTSCIEGLSSESNQEHIQVQ--PNSDSVI 187
T TL + P L + + + S E+ +EH QV+ P+S V+
Sbjct: 287 TVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTAPSSQWVL 338
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/198 (24%), Positives = 92/198 (46%)
Query: 236 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVKXXXXXXXXXXXXKRM 295
++ ER RR+++ND L LRSL+P + + D+ASI+G AI++VK
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPR--ITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 296 RMGTTSAATL-EGCDSAXXXXXXXXXXDKAILSNVYSMSRP-EIGNCEEK-MKAESKLDG 352
T + +G S + SNV S+ + ++ N +K + E ++D
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 353 AEIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKIE 412
A+++ +K+ C +PG + + AL+ L L + N T + V F ++ +
Sbjct: 433 AQLD----GREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVE-K 487
Query: 413 EDCKLGSAEEIAAAVHQI 430
D ++ AE + ++ +I
Sbjct: 488 NDNEMVQAEHVRNSLLEI 505
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 97 (39.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 236 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
++ ER RR+++ND L LRS++P + + D+ASI+G AI+++K
Sbjct: 337 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIEYLK 379
Score = 75 (31.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 364 VNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKI--EEDCKLGSA- 420
VN+ + C RRPG LL A+ A+E L L ++ + + F L I E CK G
Sbjct: 451 VNIHMFCARRPGLLLSAMRAVEGLGL-----DVQQAVISCFNGFTLDIFKAEQCKDGPGL 505
Query: 421 --EEIAAAVHQ 429
EEI A + Q
Sbjct: 506 LPEEIKAVLMQ 516
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 108 (43.1 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 228 EVESQRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
++E Q ++ ER RR+++ND L+ LRS++P + + D+ SI+G AID++K
Sbjct: 144 KLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPK--ITKMDRTSILGDAIDYMK 194
Score = 54 (24.1 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 354 EIEVIVIHNHVNLKIHCPRRPGQLLKAIVALEDLRL 389
E++ ++ H++ I CP +PG ++ + LE L L
Sbjct: 233 EVDQREVNTHID--ICCPTKPGLVVSTVSTLETLGL 266
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 236 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
++ ER RR+++ND L+ LRS++P + + D+ SI+G ID+VK
Sbjct: 183 NLMAERRRRKRLNDRLSMLRSIVPK--ISKMDRTSILGDTIDYVK 225
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 363 HVNLKIHCPRRPGQLLKAIVALEDLRL 389
+ ++I CP PG LL + ALE L L
Sbjct: 279 NTRIEICCPANPGVLLSTVSALEVLGL 305
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 16/68 (23%), Positives = 26/68 (38%)
Query: 76 DKMPFLQMLQSVGTPSVFPFKEPNFQTLLRLQHLKKPW--ELVSPFMPEMEETQIQALEF 133
D PF ++ P P +E NF L + + + +LV +TQ+ L
Sbjct: 62 DASPFQELASMAAPPPQHPHEEFNFDCLSEVCNPYRSCGAQLVPSEAASQTQTQLTPLRD 121
Query: 134 ESCVTQET 141
+ET
Sbjct: 122 AMVAEEET 129
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 101 (40.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 236 HIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFVK 280
++ ER RR+++ND L LRS++P + + D+ASI+G AID++K
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLK 350
Score = 64 (27.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 353 AEIEVIVIHNH-VNLKIHCPRRPGQLLKAIVALEDLRL 389
A +EV + VN+ + C RRPG LL + AL++L L
Sbjct: 409 ARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGL 446
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 104 (41.7 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 232 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYVQRGDQASIIGGAIDFV 279
Q+ ++ ER RR+++N HL LRSL+P + + D+ASI+G AID++
Sbjct: 282 QQCKNLEAERKRRKKLNGHLYKLRSLVPN--ITKMDRASILGDAIDYI 327
Score = 56 (24.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 13/61 (21%), Positives = 34/61 (55%)
Query: 354 EIEVIVIH-NHVNLKIHCPRRPGQLLKAIVALEDLRLTFLHLNITSSETTVHYSFNLKIE 412
++EV + N + +++ +PG ++ + A+ L L +++N+T+ +T V F + +
Sbjct: 417 QLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMVR 476
Query: 413 E 413
+
Sbjct: 477 D 477
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 437 387 0.00093 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 609 (65 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.93u 0.11s 30.04t Elapsed: 00:00:01
Total cpu time: 29.93u 0.11s 30.04t Elapsed: 00:00:01
Start: Tue May 21 05:40:50 2013 End: Tue May 21 05:40:51 2013