Query 013755
Match_columns 437
No_of_seqs 543 out of 3682
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:30:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 3.5E-57 1.2E-61 458.1 41.0 355 43-436 28-386 (457)
2 3jxv_A 70 kDa peptidyl-prolyl 100.0 1E-45 3.4E-50 360.2 16.3 263 37-302 2-355 (356)
3 1q1c_A FK506-binding protein 4 100.0 3.4E-41 1.2E-45 315.7 28.8 227 43-308 48-280 (280)
4 2if4_A ATFKBP42; FKBP-like, al 100.0 2.2E-35 7.5E-40 286.8 24.0 246 162-436 48-299 (338)
5 1p5q_A FKBP52, FK506-binding p 100.0 1.2E-33 4.1E-38 274.3 32.4 244 156-435 18-264 (336)
6 2if4_A ATFKBP42; FKBP-like, al 100.0 1E-30 3.6E-35 253.8 11.6 288 33-436 36-334 (338)
7 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 1.1E-27 3.7E-32 242.0 12.2 248 157-435 23-351 (457)
8 1p5q_A FKBP52, FK506-binding p 99.9 3.1E-25 1E-29 215.0 16.7 267 42-430 21-294 (336)
9 1r9h_A FKB-6, FK506 binding pr 99.9 8.5E-25 2.9E-29 182.4 12.2 121 44-167 12-135 (135)
10 1yat_A FK506 binding protein; 99.9 2E-24 7E-29 174.8 13.3 109 42-153 2-112 (113)
11 3kz7_A FK506-binding protein 3 99.9 2.6E-24 8.8E-29 175.9 13.5 108 44-153 2-118 (119)
12 3o5e_A Peptidyl-prolyl CIS-tra 99.9 1E-24 3.5E-29 183.8 11.0 115 38-154 26-142 (144)
13 2y78_A Peptidyl-prolyl CIS-tra 99.9 3.6E-24 1.2E-28 177.7 13.9 110 41-153 23-133 (133)
14 3o5q_A Peptidyl-prolyl CIS-tra 99.9 2E-24 7E-29 178.5 12.1 111 42-154 15-126 (128)
15 3jxv_A 70 kDa peptidyl-prolyl 99.9 1.7E-23 6E-28 203.4 20.2 161 44-210 125-294 (356)
16 2f4e_A ATFKBP42; FKBP-like, al 99.9 8.6E-24 2.9E-28 184.5 14.8 122 33-157 36-162 (180)
17 4dip_A Peptidyl-prolyl CIS-tra 99.9 8E-24 2.7E-28 174.5 13.2 112 41-155 7-123 (125)
18 2lkn_A AH receptor-interacting 99.9 1.3E-24 4.6E-29 184.8 8.5 87 42-131 6-96 (165)
19 2lgo_A FKBP; infectious diseas 99.9 8.9E-24 3E-28 174.8 12.3 109 42-153 18-130 (130)
20 2ppn_A FK506-binding protein 1 99.9 1.1E-23 3.8E-28 168.8 11.8 105 47-153 1-106 (107)
21 1jvw_A Macrophage infectivity 99.9 8.7E-24 3E-28 181.6 11.0 112 39-155 30-143 (167)
22 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.4E-23 4.8E-28 186.8 12.3 108 39-154 110-218 (219)
23 2vn1_A 70 kDa peptidylprolyl i 99.9 4E-23 1.4E-27 171.2 13.8 114 40-155 9-127 (129)
24 3b7x_A FK506-binding protein 6 99.9 6.4E-24 2.2E-28 176.8 8.9 110 42-154 22-133 (134)
25 3uf8_A Ubiquitin-like protein 99.9 4.9E-23 1.7E-27 184.0 13.9 113 38-153 96-209 (209)
26 1fd9_A Protein (macrophage inf 99.9 3.8E-23 1.3E-27 184.3 13.0 111 39-154 99-210 (213)
27 1u79_A FKBP-type peptidyl-prol 99.9 1.3E-23 4.4E-28 174.0 9.2 111 40-153 6-128 (129)
28 2jwx_A FKBP38NTD, FK506-bindin 99.9 1.2E-22 4E-27 172.5 15.0 109 42-157 38-151 (157)
29 1q6h_A FKBP-type peptidyl-prol 99.9 7.3E-23 2.5E-27 183.7 13.9 110 39-153 114-223 (224)
30 2awg_A 38 kDa FK-506 binding p 99.9 2.6E-22 9E-27 163.5 12.9 108 41-154 7-117 (118)
31 2d9f_A FK506-binding protein 8 99.9 4.7E-22 1.6E-26 165.7 10.5 110 41-157 11-125 (135)
32 3o5e_A Peptidyl-prolyl CIS-tra 99.8 2.3E-20 7.8E-25 157.2 14.8 116 156-302 26-143 (144)
33 2pbc_A FK506-binding protein 2 99.8 6.7E-21 2.3E-25 151.1 10.2 94 60-155 4-98 (102)
34 2f4e_A ATFKBP42; FKBP-like, al 99.8 8E-20 2.7E-24 159.4 14.7 127 162-318 48-179 (180)
35 3o5q_A Peptidyl-prolyl CIS-tra 99.8 7.1E-20 2.4E-24 151.2 13.5 115 157-302 11-127 (128)
36 3kz7_A FK506-binding protein 3 99.8 2.9E-19 9.9E-24 145.8 15.1 110 162-301 3-119 (119)
37 4gco_A Protein STI-1; structur 99.8 2E-19 6.8E-24 148.4 12.9 107 315-436 10-116 (126)
38 1r9h_A FKB-6, FK506 binding pr 99.8 2.8E-19 9.7E-24 148.8 13.6 117 156-303 5-123 (135)
39 2vn1_A 70 kDa peptidylprolyl i 99.8 9.4E-19 3.2E-23 144.8 15.6 117 156-302 9-127 (129)
40 2lkn_A AH receptor-interacting 99.8 1.7E-19 5.8E-24 153.4 11.2 117 161-305 8-161 (165)
41 1yat_A FK506 binding protein; 99.8 1.3E-18 4.4E-23 140.6 14.8 109 162-301 5-113 (113)
42 2ppn_A FK506-binding protein 1 99.8 8.9E-19 3E-23 140.1 12.7 107 164-301 1-107 (107)
43 4dt4_A FKBP-type 16 kDa peptid 99.8 2E-19 6.9E-24 153.7 9.4 125 61-201 24-157 (169)
44 3b7x_A FK506-binding protein 6 99.8 5.5E-19 1.9E-23 146.9 10.8 115 156-301 19-133 (134)
45 2hr2_A Hypothetical protein; a 99.8 1.4E-18 4.8E-23 147.3 12.7 124 310-436 3-137 (159)
46 2kr7_A FKBP-type peptidyl-prol 99.8 2.1E-18 7.3E-23 145.8 13.4 124 60-201 5-138 (151)
47 3uf8_A Ubiquitin-like protein 99.8 1.9E-17 6.3E-22 147.8 20.0 198 55-300 9-209 (209)
48 2awg_A 38 kDa FK-506 binding p 99.8 3.9E-18 1.3E-22 138.7 14.2 112 155-301 5-117 (118)
49 1jvw_A Macrophage infectivity 99.8 3.6E-18 1.2E-22 146.6 14.2 120 161-315 35-154 (167)
50 2lgo_A FKBP; infectious diseas 99.8 4.3E-18 1.5E-22 140.5 14.2 104 166-300 27-130 (130)
51 2y78_A Peptidyl-prolyl CIS-tra 99.8 6.2E-18 2.1E-22 140.1 14.4 108 161-300 26-133 (133)
52 3rkv_A Putative peptidylprolyl 99.8 3.8E-18 1.3E-22 146.6 13.3 125 311-435 4-131 (162)
53 2jwx_A FKBP38NTD, FK506-bindin 99.8 5.9E-18 2E-22 143.5 14.2 114 156-304 36-151 (157)
54 3pr9_A FKBP-type peptidyl-prol 99.8 5.3E-19 1.8E-23 149.7 5.9 122 61-201 1-142 (157)
55 2d9f_A FK506-binding protein 8 99.8 4.1E-18 1.4E-22 141.8 11.2 120 156-310 10-131 (135)
56 4dip_A Peptidyl-prolyl CIS-tra 99.8 1.9E-17 6.5E-22 136.1 14.6 113 159-303 8-124 (125)
57 2kfw_A FKBP-type peptidyl-prol 99.7 9.5E-19 3.2E-23 153.4 7.0 130 61-201 2-133 (196)
58 1ix5_A FKBP; ppiase, isomerase 99.7 4.8E-19 1.6E-23 149.8 4.3 123 61-201 1-143 (151)
59 2k8i_A SLYD, peptidyl-prolyl C 99.7 1.2E-17 4E-22 143.7 12.0 123 61-201 2-133 (171)
60 2fbn_A 70 kDa peptidylprolyl i 99.7 1.5E-16 5.2E-21 141.2 18.2 145 291-435 11-156 (198)
61 1q1c_A FK506-binding protein 4 99.7 7.9E-17 2.7E-21 150.5 15.7 117 156-303 42-160 (280)
62 3prb_A FKBP-type peptidyl-prol 99.7 4.4E-18 1.5E-22 152.5 6.3 122 61-201 1-142 (231)
63 3oe2_A Peptidyl-prolyl CIS-tra 99.7 6.6E-17 2.3E-21 143.8 13.8 104 161-301 115-218 (219)
64 1fd9_A Protein (macrophage inf 99.7 9.8E-17 3.3E-21 142.9 12.6 108 161-302 104-211 (213)
65 1u79_A FKBP-type peptidyl-prol 99.7 8.7E-17 3E-21 132.8 11.3 111 161-300 10-128 (129)
66 2pbc_A FK506-binding protein 2 99.7 1.5E-16 5.3E-21 125.8 12.1 85 215-303 15-99 (102)
67 4gcn_A Protein STI-1; structur 99.7 1.3E-16 4.6E-21 131.5 12.2 105 314-433 4-115 (127)
68 3gyz_A Chaperone protein IPGC; 99.7 1.9E-16 6.5E-21 134.8 12.8 106 315-435 33-138 (151)
69 1q6h_A FKBP-type peptidyl-prol 99.7 3.5E-16 1.2E-20 140.3 13.7 105 161-300 119-223 (224)
70 3cgm_A SLYD, peptidyl-prolyl C 99.7 1.1E-16 3.8E-21 135.9 8.8 118 62-201 3-129 (158)
71 1hxv_A Trigger factor; FKBP fo 99.7 1.5E-16 5.3E-21 127.5 8.7 86 57-153 26-112 (113)
72 3upv_A Heat shock protein STI1 99.7 7.2E-16 2.5E-20 126.2 12.4 104 317-435 3-112 (126)
73 3sz7_A HSC70 cochaperone (SGT) 99.6 2.1E-15 7E-20 129.6 13.8 107 315-436 8-114 (164)
74 2vgx_A Chaperone SYCD; alterna 99.6 3.3E-15 1.1E-19 126.6 13.3 106 316-436 19-124 (148)
75 4ga2_A E3 SUMO-protein ligase 99.6 2.5E-15 8.4E-20 127.6 10.8 106 316-436 29-135 (150)
76 2xcb_A PCRH, regulatory protei 99.6 5.6E-15 1.9E-19 123.9 12.5 107 315-436 15-121 (142)
77 1ihg_A Cyclophilin 40; ppiase 99.6 1.1E-14 3.9E-19 142.4 15.0 126 310-435 215-341 (370)
78 1hxi_A PEX5, peroxisome target 99.6 7.8E-15 2.7E-19 119.8 11.6 102 320-436 19-120 (121)
79 3q49_B STIP1 homology and U bo 99.5 5.2E-14 1.8E-18 116.3 12.0 103 317-434 8-110 (137)
80 3urz_A Uncharacterized protein 99.5 4.6E-14 1.6E-18 126.4 11.3 119 318-436 4-123 (208)
81 1elw_A TPR1-domain of HOP; HOP 99.5 2.4E-13 8.1E-18 108.3 13.1 104 317-435 3-106 (118)
82 4ga2_A E3 SUMO-protein ligase 99.5 1.4E-14 4.8E-19 122.9 5.7 98 324-436 3-100 (150)
83 1a17_A Serine/threonine protei 99.5 4.3E-13 1.5E-17 114.1 14.9 110 311-435 6-115 (166)
84 4gyw_A UDP-N-acetylglucosamine 99.5 1.4E-13 4.9E-18 145.5 12.7 120 316-435 7-145 (723)
85 2dba_A Smooth muscle cell asso 99.5 3.7E-13 1.3E-17 112.2 12.6 107 317-435 27-133 (148)
86 2lni_A Stress-induced-phosphop 99.5 2.9E-13 1E-17 110.5 11.7 105 316-435 14-118 (133)
87 2vyi_A SGTA protein; chaperone 99.5 8.9E-13 3.1E-17 106.9 14.6 110 311-435 5-114 (131)
88 2xev_A YBGF; tetratricopeptide 99.5 5.5E-13 1.9E-17 108.8 13.3 104 320-435 4-110 (129)
89 2c2l_A CHIP, carboxy terminus 99.5 2E-13 6.8E-18 128.3 11.5 103 318-435 4-106 (281)
90 1zu2_A Mitochondrial import re 99.5 1.1E-13 3.7E-18 117.0 8.4 91 330-435 14-125 (158)
91 3vtx_A MAMA; tetratricopeptide 99.4 6.6E-13 2.3E-17 115.6 11.8 69 367-435 107-175 (184)
92 4i17_A Hypothetical protein; T 99.4 1.1E-12 3.6E-17 118.6 13.4 103 318-435 7-110 (228)
93 4gyw_A UDP-N-acetylglucosamine 99.4 4.3E-13 1.5E-17 141.8 12.4 68 367-434 111-178 (723)
94 3k9i_A BH0479 protein; putativ 99.4 1.4E-13 4.7E-18 111.2 6.5 91 330-435 2-95 (117)
95 2kck_A TPR repeat; tetratricop 99.4 7.2E-13 2.5E-17 104.5 10.3 101 320-435 8-111 (112)
96 2pl2_A Hypothetical conserved 99.4 1.2E-12 4E-17 118.0 12.6 103 318-435 5-118 (217)
97 1elr_A TPR2A-domain of HOP; HO 99.4 1.9E-12 6.4E-17 105.1 12.1 103 316-433 2-111 (131)
98 2h6f_A Protein farnesyltransfe 99.4 1.2E-12 4.1E-17 128.5 10.4 103 318-435 131-234 (382)
99 3urz_A Uncharacterized protein 99.4 3.7E-12 1.3E-16 113.9 12.6 97 323-434 59-190 (208)
100 2h6f_A Protein farnesyltransfe 99.4 2.2E-12 7.4E-17 126.6 11.9 105 316-435 95-200 (382)
101 1na0_A Designed protein CTPR3; 99.4 1.1E-11 3.8E-16 99.4 14.2 103 318-435 9-111 (125)
102 2e2e_A Formate-dependent nitri 99.4 7.1E-12 2.4E-16 108.5 13.8 104 318-436 44-150 (177)
103 1wao_1 Serine/threonine protei 99.4 1E-12 3.4E-17 133.0 8.7 106 316-436 4-109 (477)
104 2pl2_A Hypothetical conserved 99.3 5.9E-12 2E-16 113.3 12.5 117 318-435 39-185 (217)
105 3vtx_A MAMA; tetratricopeptide 99.3 9.2E-12 3.2E-16 108.3 13.0 118 318-435 5-141 (184)
106 1hh8_A P67PHOX, NCF-2, neutrop 99.3 8.4E-12 2.9E-16 111.0 12.9 102 318-434 37-154 (213)
107 4dt4_A FKBP-type 16 kDa peptid 99.3 2.6E-12 8.9E-17 109.6 8.9 62 215-277 34-95 (169)
108 2l6j_A TPR repeat-containing p 99.3 1.1E-12 3.8E-17 103.8 4.9 95 317-426 3-103 (111)
109 4i17_A Hypothetical protein; T 99.3 7.5E-12 2.6E-16 112.9 11.0 112 317-436 75-215 (228)
110 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.4E-11 4.9E-16 109.5 12.6 102 316-435 4-105 (213)
111 3pr9_A FKBP-type peptidyl-prol 99.3 1.1E-11 3.9E-16 104.7 10.9 64 214-279 10-86 (157)
112 1xnf_A Lipoprotein NLPI; TPR, 99.3 3.6E-11 1.2E-15 110.8 14.2 106 315-435 40-145 (275)
113 3prb_A FKBP-type peptidyl-prol 99.3 1.4E-11 4.8E-16 110.3 10.7 62 214-277 10-84 (231)
114 3qky_A Outer membrane assembly 99.3 2.5E-11 8.6E-16 112.0 12.5 108 317-436 14-132 (261)
115 2yhc_A BAMD, UPF0169 lipoprote 99.3 2E-11 6.9E-16 110.3 11.6 107 318-436 4-131 (225)
116 3uq3_A Heat shock protein STI1 99.2 5.1E-11 1.7E-15 108.5 13.1 105 316-435 137-247 (258)
117 3qky_A Outer membrane assembly 99.2 6.2E-11 2.1E-15 109.4 12.9 106 318-435 52-182 (261)
118 3gyz_A Chaperone protein IPGC; 99.2 3.5E-12 1.2E-16 108.2 4.0 70 367-436 36-105 (151)
119 2gw1_A Mitochondrial precursor 99.2 7.6E-11 2.6E-15 118.8 14.6 106 314-435 2-107 (514)
120 2fo7_A Synthetic consensus TPR 99.2 1.3E-10 4.3E-15 94.2 13.2 101 319-434 36-136 (136)
121 1w26_A Trigger factor, TF; cha 99.2 1.9E-11 6.6E-16 121.0 9.8 89 60-157 156-244 (432)
122 3fp2_A TPR repeat-containing p 99.2 4E-11 1.4E-15 121.8 11.5 113 307-435 14-126 (537)
123 2kat_A Uncharacterized protein 99.2 3.1E-11 1E-15 96.7 8.2 85 336-435 3-87 (115)
124 2fo7_A Synthetic consensus TPR 99.2 1.6E-10 5.3E-15 93.6 12.5 102 319-435 2-103 (136)
125 1hxv_A Trigger factor; FKBP fo 99.2 3.5E-11 1.2E-15 96.2 8.2 74 214-300 38-112 (113)
126 2k8i_A SLYD, peptidyl-prolyl C 99.2 2.2E-10 7.6E-15 98.2 13.6 62 214-277 11-72 (171)
127 1qqe_A Vesicular transport pro 99.2 1.3E-10 4.3E-15 109.6 13.4 112 316-436 75-193 (292)
128 2vsy_A XCC0866; transferase, g 99.2 5.8E-11 2E-15 122.5 11.9 103 318-435 23-125 (568)
129 3as5_A MAMA; tetratricopeptide 99.2 1.4E-10 4.9E-15 99.6 12.3 102 319-435 77-178 (186)
130 3ieg_A DNAJ homolog subfamily 99.2 2.5E-10 8.5E-15 109.0 15.0 108 318-436 234-341 (359)
131 2pzi_A Probable serine/threoni 99.2 1.2E-11 4E-16 130.7 6.2 101 318-434 433-533 (681)
132 4gco_A Protein STI-1; structur 99.2 1E-10 3.4E-15 95.8 10.3 70 366-435 12-81 (126)
133 4gcn_A Protein STI-1; structur 99.2 6.1E-11 2.1E-15 97.2 8.9 70 366-435 7-76 (127)
134 1qqe_A Vesicular transport pro 99.2 9.9E-11 3.4E-15 110.3 11.6 110 317-435 116-233 (292)
135 4eqf_A PEX5-related protein; a 99.2 7.1E-11 2.4E-15 114.1 10.7 103 318-435 65-167 (365)
136 4eqf_A PEX5-related protein; a 99.2 9E-11 3.1E-15 113.4 11.3 102 318-434 213-314 (365)
137 3as5_A MAMA; tetratricopeptide 99.2 3.5E-10 1.2E-14 97.1 13.9 103 318-435 42-144 (186)
138 2kc7_A BFR218_protein; tetratr 99.2 3.6E-11 1.2E-15 93.3 6.8 93 321-436 3-96 (99)
139 3uq3_A Heat shock protein STI1 99.2 2.2E-10 7.6E-15 104.2 13.0 102 316-433 3-111 (258)
140 2kr7_A FKBP-type peptidyl-prol 99.2 2.5E-10 8.4E-15 96.2 11.7 63 214-278 15-78 (151)
141 4abn_A Tetratricopeptide repea 99.2 1E-10 3.6E-15 118.1 11.0 102 319-435 171-292 (474)
142 3ieg_A DNAJ homolog subfamily 99.1 3E-10 1E-14 108.4 13.3 101 317-432 2-102 (359)
143 1fch_A Peroxisomal targeting s 99.1 2.2E-10 7.7E-15 110.3 12.5 102 318-434 217-318 (368)
144 3u4t_A TPR repeat-containing p 99.1 1.7E-10 5.7E-15 106.3 11.2 104 320-435 39-142 (272)
145 2kfw_A FKBP-type peptidyl-prol 99.1 1.7E-10 5.8E-15 101.0 10.4 62 214-277 11-72 (196)
146 2q7f_A YRRB protein; TPR, prot 99.1 2.9E-10 9.8E-15 102.6 12.1 100 321-435 128-227 (243)
147 4abn_A Tetratricopeptide repea 99.1 1.4E-10 4.7E-15 117.2 10.7 102 318-435 102-213 (474)
148 2q7f_A YRRB protein; TPR, prot 99.1 6.3E-10 2.2E-14 100.4 14.0 67 368-434 126-192 (243)
149 1fch_A Peroxisomal targeting s 99.1 3.1E-10 1E-14 109.3 12.6 103 318-435 64-166 (368)
150 2r5s_A Uncharacterized protein 99.1 3.4E-10 1.2E-14 98.0 11.5 101 320-435 8-142 (176)
151 2pzi_A Probable serine/threoni 99.1 9.8E-11 3.3E-15 123.7 9.6 101 319-435 468-568 (681)
152 3hym_B Cell division cycle pro 99.1 3.9E-10 1.3E-14 106.5 12.6 112 318-435 193-304 (330)
153 2vgx_A Chaperone SYCD; alterna 99.1 5.8E-11 2E-15 100.2 6.0 83 339-436 8-90 (148)
154 3u4t_A TPR repeat-containing p 99.1 4.1E-10 1.4E-14 103.7 12.3 103 318-435 74-176 (272)
155 3qou_A Protein YBBN; thioredox 99.1 4.3E-10 1.5E-14 105.7 12.3 102 318-434 117-252 (287)
156 1na3_A Designed protein CTPR2; 99.1 7.2E-10 2.4E-14 84.0 11.4 84 317-415 8-91 (91)
157 2y4t_A DNAJ homolog subfamily 99.1 6.4E-10 2.2E-14 110.3 14.2 106 319-435 258-363 (450)
158 2vq2_A PILW, putative fimbrial 99.1 1E-09 3.5E-14 97.4 14.0 67 368-434 77-146 (225)
159 2y4t_A DNAJ homolog subfamily 99.1 5.2E-10 1.8E-14 110.9 13.2 106 315-435 23-128 (450)
160 3ma5_A Tetratricopeptide repea 99.1 1.4E-10 4.6E-15 90.8 7.1 69 367-435 7-75 (100)
161 3mkr_A Coatomer subunit epsilo 99.1 5E-10 1.7E-14 105.5 12.4 118 318-435 130-269 (291)
162 2yhc_A BAMD, UPF0169 lipoprote 99.1 6.1E-10 2.1E-14 100.5 12.0 106 318-435 41-181 (225)
163 3u3w_A Transcriptional activat 99.1 7.4E-10 2.5E-14 104.1 13.1 108 316-431 153-267 (293)
164 3cv0_A Peroxisome targeting si 99.1 1.2E-09 4E-14 103.0 13.8 105 317-436 20-124 (327)
165 2vsy_A XCC0866; transferase, g 99.1 1.1E-09 3.7E-14 113.0 14.3 103 318-435 57-162 (568)
166 1w3b_A UDP-N-acetylglucosamine 99.1 6.2E-10 2.1E-14 108.5 11.8 118 318-435 67-203 (388)
167 1ix5_A FKBP; ppiase, isomerase 99.1 1E-10 3.5E-15 98.5 5.3 64 215-279 11-87 (151)
168 3mkr_A Coatomer subunit epsilo 99.1 7.6E-10 2.6E-14 104.3 11.9 114 318-436 101-235 (291)
169 2ho1_A Type 4 fimbrial biogene 99.1 1.1E-09 3.6E-14 99.8 12.6 68 367-434 141-208 (252)
170 2e2e_A Formate-dependent nitri 99.1 1.1E-10 3.9E-15 100.8 5.6 98 323-435 15-115 (177)
171 3ro3_A PINS homolog, G-protein 99.1 1.2E-09 4.1E-14 91.4 11.7 108 315-431 6-119 (164)
172 2l6j_A TPR repeat-containing p 99.1 6.6E-10 2.3E-14 87.5 9.5 68 367-434 4-71 (111)
173 1w3b_A UDP-N-acetylglucosamine 99.1 9.9E-10 3.4E-14 107.0 12.8 67 368-434 238-304 (388)
174 1t11_A Trigger factor, TF; hel 99.1 9.6E-11 3.3E-15 114.5 5.4 91 60-159 159-249 (392)
175 2ho1_A Type 4 fimbrial biogene 99.1 1.7E-09 5.9E-14 98.4 13.5 103 318-435 141-243 (252)
176 2vq2_A PILW, putative fimbrial 99.1 1.6E-09 5.3E-14 96.3 12.9 102 321-435 79-182 (225)
177 2ifu_A Gamma-SNAP; membrane fu 99.0 9.2E-10 3.1E-14 104.4 11.9 109 316-435 114-228 (307)
178 3q15_A PSP28, response regulat 99.0 1.7E-09 5.8E-14 105.4 13.8 110 316-434 180-294 (378)
179 1xnf_A Lipoprotein NLPI; TPR, 99.0 2.7E-09 9.1E-14 98.1 14.4 69 318-401 77-145 (275)
180 3cv0_A Peroxisome targeting si 99.0 1.6E-09 5.4E-14 102.1 13.1 102 318-434 172-273 (327)
181 1a17_A Serine/threonine protei 99.0 2.3E-09 7.9E-14 90.6 12.7 99 318-431 47-147 (166)
182 3ro3_A PINS homolog, G-protein 99.0 2.5E-09 8.6E-14 89.4 12.5 110 316-434 47-162 (164)
183 2xcb_A PCRH, regulatory protei 99.0 3E-10 1E-14 94.7 6.5 70 367-436 18-87 (142)
184 3ulq_A Response regulator aspa 99.0 1.1E-09 3.6E-14 107.0 11.3 110 314-432 180-295 (383)
185 2ifu_A Gamma-SNAP; membrane fu 99.0 6.5E-10 2.2E-14 105.4 9.5 110 316-435 74-189 (307)
186 3hym_B Cell division cycle pro 99.0 2.2E-09 7.5E-14 101.3 12.9 100 319-433 91-191 (330)
187 3cgm_A SLYD, peptidyl-prolyl C 99.0 1.3E-09 4.3E-14 92.3 9.6 57 214-277 11-67 (158)
188 3upv_A Heat shock protein STI1 99.0 1.8E-09 6.1E-14 87.6 10.1 69 367-435 4-72 (126)
189 1na3_A Designed protein CTPR2; 99.0 2.4E-09 8.1E-14 81.1 10.0 69 367-435 9-77 (91)
190 2qfc_A PLCR protein; TPR, HTH, 99.0 2.5E-09 8.7E-14 100.4 12.3 107 317-431 154-267 (293)
191 4g1t_A Interferon-induced prot 99.0 2.7E-09 9.3E-14 106.6 13.2 113 318-436 51-173 (472)
192 2kc7_A BFR218_protein; tetratr 99.0 2.3E-09 7.8E-14 82.9 9.4 67 370-436 3-70 (99)
193 3fp2_A TPR repeat-containing p 98.9 4E-09 1.4E-13 106.9 12.6 103 318-435 310-412 (537)
194 3u3w_A Transcriptional activat 98.9 3E-09 1E-13 99.9 10.5 108 318-434 115-229 (293)
195 1wao_1 Serine/threonine protei 98.9 6.6E-10 2.3E-14 112.3 6.3 103 318-435 40-155 (477)
196 1hxi_A PEX5, peroxisome target 98.9 4E-09 1.4E-13 85.4 9.6 69 368-436 18-86 (121)
197 3edt_B KLC 2, kinesin light ch 98.9 5.6E-09 1.9E-13 95.9 11.8 108 316-430 41-156 (283)
198 2gw1_A Mitochondrial precursor 98.9 4.2E-09 1.4E-13 105.9 11.6 107 320-435 374-483 (514)
199 2xpi_A Anaphase-promoting comp 98.9 1.1E-08 3.8E-13 105.2 15.0 108 321-436 478-585 (597)
200 2hr2_A Hypothetical protein; a 98.9 3.2E-09 1.1E-13 89.7 8.7 69 367-435 11-98 (159)
201 2qfc_A PLCR protein; TPR, HTH, 98.9 2E-08 7E-13 94.2 15.2 107 317-432 114-227 (293)
202 3gw4_A Uncharacterized protein 98.9 6.3E-09 2.2E-13 91.1 11.0 106 317-431 25-137 (203)
203 3ulq_A Response regulator aspa 98.9 1E-08 3.5E-13 99.9 13.5 109 314-430 139-253 (383)
204 3sz7_A HSC70 cochaperone (SGT) 98.9 5.5E-09 1.9E-13 89.0 10.1 70 366-435 10-79 (164)
205 3edt_B KLC 2, kinesin light ch 98.9 9.8E-09 3.4E-13 94.2 11.8 111 315-432 82-200 (283)
206 2fbn_A 70 kDa peptidylprolyl i 98.9 7E-09 2.4E-13 91.3 10.3 98 317-429 87-185 (198)
207 3nf1_A KLC 1, kinesin light ch 98.9 6.4E-09 2.2E-13 97.2 10.1 111 316-433 151-310 (311)
208 3ro2_A PINS homolog, G-protein 98.9 7E-09 2.4E-13 97.5 10.2 107 317-434 4-116 (338)
209 4a1s_A PINS, partner of inscut 98.9 1.1E-08 3.7E-13 100.2 11.6 106 315-431 45-156 (411)
210 3n71_A Histone lysine methyltr 98.8 2.2E-08 7.6E-13 100.9 13.6 111 313-430 304-422 (490)
211 2vyi_A SGTA protein; chaperone 98.8 1.5E-08 5.1E-13 81.4 9.9 85 318-417 46-130 (131)
212 3sf4_A G-protein-signaling mod 98.8 7.1E-09 2.4E-13 100.8 9.2 106 318-434 9-120 (406)
213 3q49_B STIP1 homology and U bo 98.8 1.9E-08 6.6E-13 82.2 10.0 69 367-435 9-77 (137)
214 2lni_A Stress-induced-phosphop 98.8 1.7E-08 5.8E-13 81.7 9.4 84 318-416 50-133 (133)
215 2kck_A TPR repeat; tetratricop 98.8 2E-08 6.9E-13 78.4 9.5 66 368-433 7-72 (112)
216 3q15_A PSP28, response regulat 98.8 3.2E-08 1.1E-12 96.3 12.4 108 315-430 138-251 (378)
217 3sf4_A G-protein-signaling mod 98.8 2E-08 6.9E-13 97.5 10.9 109 316-433 185-299 (406)
218 3k9i_A BH0479 protein; putativ 98.8 2.3E-08 7.7E-13 80.1 9.2 78 315-407 24-101 (117)
219 3qww_A SET and MYND domain-con 98.8 4.5E-08 1.5E-12 97.2 13.3 108 316-430 296-411 (433)
220 2xpi_A Anaphase-promoting comp 98.8 4E-08 1.4E-12 101.1 13.5 113 318-430 373-504 (597)
221 1pc2_A Mitochondria fission pr 98.8 9.9E-09 3.4E-13 85.6 6.9 89 333-436 13-106 (152)
222 3rkv_A Putative peptidylprolyl 98.8 1.7E-08 5.9E-13 85.7 8.7 91 315-420 60-151 (162)
223 3gw4_A Uncharacterized protein 98.8 8.9E-08 3.1E-12 83.6 13.5 110 315-432 63-178 (203)
224 1ihg_A Cyclophilin 40; ppiase 98.8 3.4E-08 1.2E-12 96.3 11.8 93 316-423 271-363 (370)
225 3nf1_A KLC 1, kinesin light ch 98.8 1.9E-08 6.5E-13 93.9 9.7 111 315-432 108-226 (311)
226 1ouv_A Conserved hypothetical 98.8 8.1E-08 2.8E-12 88.7 13.3 63 367-431 74-144 (273)
227 2r5s_A Uncharacterized protein 98.8 2.2E-08 7.6E-13 86.4 8.8 114 315-429 37-172 (176)
228 4a1s_A PINS, partner of inscut 98.7 2.4E-08 8.2E-13 97.7 9.9 107 317-432 222-334 (411)
229 2v5f_A Prolyl 4-hydroxylase su 98.7 1.2E-07 4.1E-12 74.5 12.1 83 318-408 5-87 (104)
230 4f3v_A ESX-1 secretion system 98.7 4.7E-08 1.6E-12 90.7 11.3 101 320-433 137-240 (282)
231 3ro2_A PINS homolog, G-protein 98.7 4.6E-08 1.6E-12 91.8 11.3 106 320-434 225-336 (338)
232 2ond_A Cleavage stimulation fa 98.7 5.2E-08 1.8E-12 92.1 11.4 101 319-434 51-167 (308)
233 4g1t_A Interferon-induced prot 98.7 3.2E-08 1.1E-12 98.7 10.2 118 318-435 247-406 (472)
234 1elw_A TPR1-domain of HOP; HOP 98.7 7.3E-08 2.5E-12 75.8 10.1 69 367-435 4-72 (118)
235 2ond_A Cleavage stimulation fa 98.7 9.2E-08 3.2E-12 90.4 12.5 112 319-430 100-232 (308)
236 3ma5_A Tetratricopeptide repea 98.7 7.7E-08 2.6E-12 74.8 9.8 84 318-416 7-92 (100)
237 1zu2_A Mitochondrial import re 98.7 2.6E-08 9E-13 83.9 7.2 71 317-402 35-126 (158)
238 2xev_A YBGF; tetratricopeptide 98.7 5.4E-08 1.8E-12 78.6 8.6 68 368-435 3-73 (129)
239 1ouv_A Conserved hypothetical 98.7 2E-07 7E-12 85.9 13.6 63 367-431 110-180 (273)
240 1na0_A Designed protein CTPR3; 98.7 1.6E-07 5.4E-12 74.6 11.0 83 318-415 43-125 (125)
241 3qwp_A SET and MYND domain-con 98.6 1.8E-07 6.3E-12 92.8 12.9 108 316-430 285-400 (429)
242 1dce_A Protein (RAB geranylger 98.6 2.6E-07 8.7E-12 95.1 13.7 109 312-435 22-143 (567)
243 3qou_A Protein YBBN; thioredox 98.6 8.9E-08 3.1E-12 89.7 9.0 114 317-430 150-284 (287)
244 3rjv_A Putative SEL1 repeat pr 98.6 1.5E-07 5.2E-12 83.9 10.0 64 367-430 85-158 (212)
245 3rjv_A Putative SEL1 repeat pr 98.6 1.2E-07 4.1E-12 84.6 9.3 97 316-432 16-120 (212)
246 3bee_A Putative YFRE protein; 98.6 1.8E-07 6.2E-12 71.9 9.0 69 367-435 6-77 (93)
247 3dra_A Protein farnesyltransfe 98.6 3.9E-07 1.3E-11 86.1 13.1 103 318-435 67-180 (306)
248 1dce_A Protein (RAB geranylger 98.6 1.7E-07 5.8E-12 96.5 10.9 103 318-435 63-178 (567)
249 1w26_A Trigger factor, TF; cha 98.6 1.4E-07 4.8E-12 93.3 9.7 77 215-303 167-243 (432)
250 1elr_A TPR2A-domain of HOP; HO 98.6 1.4E-07 4.7E-12 75.7 7.9 68 367-434 4-71 (131)
251 1hz4_A MALT regulatory protein 98.6 3.6E-07 1.2E-11 88.3 12.2 108 317-433 52-167 (373)
252 2kat_A Uncharacterized protein 98.6 3.1E-07 1.1E-11 72.9 9.5 85 318-417 19-105 (115)
253 2dba_A Smooth muscle cell asso 98.5 4E-07 1.4E-11 74.9 10.2 82 317-413 64-145 (148)
254 2c2l_A CHIP, carboxy terminus 98.5 2.2E-07 7.6E-12 86.8 9.0 69 367-435 4-72 (281)
255 3dra_A Protein farnesyltransfe 98.5 6.2E-07 2.1E-11 84.7 11.9 101 320-435 105-220 (306)
256 1klx_A Cysteine rich protein B 98.5 1.2E-06 4E-11 72.5 11.5 89 324-431 31-127 (138)
257 3dss_A Geranylgeranyl transfer 98.5 1.3E-06 4.5E-11 83.1 13.0 103 318-435 108-227 (331)
258 2v5f_A Prolyl 4-hydroxylase su 98.5 5.8E-07 2E-11 70.5 8.7 69 367-435 5-80 (104)
259 3dss_A Geranylgeranyl transfer 98.5 1.1E-06 3.9E-11 83.6 12.0 112 323-434 34-178 (331)
260 3n71_A Histone lysine methyltr 98.4 9.4E-07 3.2E-11 89.0 11.4 109 316-431 349-465 (490)
261 3q7a_A Farnesyltransferase alp 98.4 1.2E-06 4.2E-11 83.8 10.2 99 321-434 91-200 (349)
262 1hz4_A MALT regulatory protein 98.4 4.2E-06 1.5E-10 80.6 14.0 108 318-432 93-205 (373)
263 3q7a_A Farnesyltransferase alp 98.4 2.5E-06 8.5E-11 81.7 11.7 93 328-435 64-159 (349)
264 2ooe_A Cleavage stimulation fa 98.2 4.7E-06 1.6E-10 84.8 11.6 118 318-435 321-459 (530)
265 2ooe_A Cleavage stimulation fa 98.2 4.3E-06 1.5E-10 85.1 10.9 101 318-433 272-388 (530)
266 1t11_A Trigger factor, TF; hel 98.2 8.9E-07 3E-11 86.4 4.5 77 215-303 170-246 (392)
267 2xm6_A Protein corresponding t 98.2 1.2E-05 4.2E-10 80.8 12.7 65 367-433 363-435 (490)
268 3ly7_A Transcriptional activat 98.2 2.9E-05 9.8E-10 74.4 14.5 114 320-434 198-343 (372)
269 1nzn_A CGI-135 protein, fissio 98.2 3E-06 1E-10 68.1 6.3 90 332-436 15-109 (126)
270 3ffl_A Anaphase-promoting comp 98.1 2.1E-05 7.1E-10 66.0 11.3 100 320-426 22-147 (167)
271 1pc2_A Mitochondria fission pr 98.1 1.1E-05 3.9E-10 67.1 9.6 81 318-412 32-116 (152)
272 4f3v_A ESX-1 secretion system 98.1 3.7E-06 1.3E-10 77.9 6.4 96 319-430 103-200 (282)
273 4b4t_Q 26S proteasome regulato 98.1 1.7E-05 5.8E-10 77.9 10.9 121 313-433 50-207 (434)
274 3u64_A Protein TP_0956; tetrat 98.1 1.7E-05 5.9E-10 73.0 10.0 89 333-434 178-273 (301)
275 2xm6_A Protein corresponding t 98.0 4.2E-05 1.4E-09 76.9 13.4 111 318-430 39-180 (490)
276 3e4b_A ALGK; tetratricopeptide 98.0 2.1E-05 7.1E-10 78.5 10.3 31 320-350 178-211 (452)
277 4b4t_Q 26S proteasome regulato 98.0 2.7E-05 9.3E-10 76.3 10.2 65 368-432 96-166 (434)
278 1klx_A Cysteine rich protein B 97.9 3.6E-05 1.2E-09 63.4 8.9 78 332-430 9-90 (138)
279 3gty_X Trigger factor, TF; cha 97.9 1.8E-05 6.1E-10 78.2 8.0 76 61-157 154-229 (433)
280 3bee_A Putative YFRE protein; 97.9 2.9E-05 9.8E-10 59.4 7.5 69 318-401 6-77 (93)
281 1b89_A Protein (clathrin heavy 97.9 2E-05 6.7E-10 77.5 7.5 32 403-434 209-240 (449)
282 1xi4_A Clathrin heavy chain; a 97.8 4.9E-05 1.7E-09 83.7 10.4 92 320-434 1197-1313(1630)
283 3e4b_A ALGK; tetratricopeptide 97.8 4.8E-05 1.7E-09 75.8 9.6 58 368-429 284-350 (452)
284 3mv2_B Coatomer subunit epsilo 97.8 4.9E-05 1.7E-09 71.3 7.7 94 324-435 182-287 (310)
285 1xi4_A Clathrin heavy chain; a 97.7 0.00011 3.6E-09 81.1 10.9 107 322-433 1053-1166(1630)
286 3qwp_A SET and MYND domain-con 97.7 9E-05 3.1E-09 73.3 9.0 94 315-415 326-427 (429)
287 3o48_A Mitochondria fission 1 97.6 0.00011 3.8E-09 59.1 6.6 70 367-436 40-113 (134)
288 1y8m_A FIS1; mitochondria, unk 97.6 0.00016 5.4E-09 58.9 7.4 70 367-436 39-112 (144)
289 3mv2_B Coatomer subunit epsilo 97.5 0.0002 6.9E-09 67.1 8.4 107 322-431 104-241 (310)
290 2ff4_A Probable regulatory pro 97.5 0.0017 5.9E-08 63.2 15.4 115 315-429 112-233 (388)
291 3qww_A SET and MYND domain-con 97.5 0.00026 9E-09 70.0 9.1 80 316-402 338-422 (433)
292 1nzn_A CGI-135 protein, fissio 97.3 0.0011 3.9E-08 53.0 9.3 79 319-411 36-118 (126)
293 3u64_A Protein TP_0956; tetrat 97.3 0.0012 4.1E-08 60.8 10.0 53 382-434 178-237 (301)
294 3o48_A Mitochondria fission 1 97.2 0.0033 1.1E-07 50.5 11.0 80 319-412 41-123 (134)
295 1y8m_A FIS1; mitochondria, unk 97.2 0.0044 1.5E-07 50.4 11.8 79 319-411 40-121 (144)
296 3ffl_A Anaphase-promoting comp 96.9 0.0044 1.5E-07 51.9 9.0 95 316-411 61-165 (167)
297 1b89_A Protein (clathrin heavy 96.7 0.0017 5.9E-08 63.7 5.8 122 311-432 141-274 (449)
298 3ly7_A Transcriptional activat 96.5 0.01 3.5E-07 56.7 9.5 68 322-406 281-348 (372)
299 4gns_B Protein CSD3, chitin bi 96.1 0.04 1.4E-06 57.8 12.0 60 368-427 338-397 (754)
300 4e6h_A MRNA 3'-END-processing 95.8 0.053 1.8E-06 56.6 11.6 99 321-433 437-536 (679)
301 4e6h_A MRNA 3'-END-processing 95.8 0.029 1E-06 58.5 9.5 82 334-430 325-407 (679)
302 3txn_A 26S proteasome regulato 95.7 0.16 5.4E-06 49.1 13.5 98 323-429 104-209 (394)
303 4h7y_A Dual specificity protei 95.4 0.13 4.4E-06 42.3 9.9 92 335-434 36-127 (161)
304 3kae_A CDC27, possible protein 94.9 0.17 5.7E-06 42.3 9.4 89 324-432 39-145 (242)
305 3gty_X Trigger factor, TF; cha 94.7 0.056 1.9E-06 53.1 7.4 59 222-303 170-228 (433)
306 3mkr_B Coatomer subunit alpha; 94.7 0.26 9E-06 45.7 11.3 115 318-433 102-230 (320)
307 4b4t_R RPN7, 26S proteasome re 94.7 0.13 4.4E-06 50.5 9.9 98 321-430 134-237 (429)
308 3mv2_A Coatomer subunit alpha; 94.6 0.18 6.2E-06 46.8 9.8 118 315-433 111-239 (325)
309 1zbp_A Hypothetical protein VP 94.4 0.39 1.3E-05 43.4 11.3 96 325-435 4-134 (273)
310 4b4t_P 26S proteasome regulato 93.7 1.1 3.9E-05 44.0 14.4 106 316-430 135-247 (445)
311 4gns_B Protein CSD3, chitin bi 93.7 0.12 4.1E-06 54.2 7.5 59 320-393 339-397 (754)
312 1zbp_A Hypothetical protein VP 93.1 0.29 9.8E-06 44.3 8.0 60 375-434 5-64 (273)
313 1ya0_A SMG-7 transcript varian 92.9 0.27 9.2E-06 49.1 8.4 66 366-431 151-216 (497)
314 2uy1_A Cleavage stimulation fa 92.7 0.88 3E-05 45.4 12.0 114 320-435 215-354 (493)
315 1ya0_A SMG-7 transcript varian 91.7 0.98 3.3E-05 45.0 10.7 80 319-413 153-232 (497)
316 4g26_A Pentatricopeptide repea 91.4 2.9 9.8E-05 41.7 14.0 95 321-429 108-203 (501)
317 2v6y_A AAA family ATPase, P60 90.6 0.65 2.2E-05 34.0 6.2 39 310-348 2-41 (83)
318 3txn_A 26S proteasome regulato 89.8 2.4 8.3E-05 40.8 11.2 114 317-430 18-168 (394)
319 2uy1_A Cleavage stimulation fa 89.2 2 6.7E-05 42.8 10.6 92 320-427 288-380 (493)
320 2cpt_A SKD1 protein, vacuolar 88.2 1.2 4E-05 34.9 6.4 43 307-349 6-49 (117)
321 2w2u_A Hypothetical P60 katani 86.2 1.3 4.6E-05 32.3 5.3 40 309-348 9-49 (83)
322 3mkq_B Coatomer subunit alpha; 85.3 3.4 0.00011 34.9 8.1 28 318-345 34-61 (177)
323 3lpz_A GET4 (YOR164C homolog); 84.6 7.3 0.00025 36.4 10.8 112 313-424 30-159 (336)
324 4g26_A Pentatricopeptide repea 84.6 5.9 0.0002 39.4 11.1 85 332-430 84-169 (501)
325 3mkq_A Coatomer beta'-subunit; 84.3 2.2 7.6E-05 44.7 8.2 59 368-426 682-761 (814)
326 4b4t_S RPN3, 26S proteasome re 84.0 1.9 6.4E-05 42.9 6.9 68 366-435 230-304 (523)
327 2v6x_A Vacuolar protein sortin 83.9 1.7 5.9E-05 31.7 5.1 40 309-348 4-43 (85)
328 2dl1_A Spartin; SPG20, MIT, st 83.1 6.6 0.00023 30.4 8.1 74 313-386 17-97 (116)
329 1wfd_A Hypothetical protein 15 82.0 5.6 0.00019 29.6 7.4 37 313-349 10-46 (93)
330 2ff4_A Probable regulatory pro 81.8 4.8 0.00016 38.6 8.8 63 318-395 171-233 (388)
331 4fhn_B Nucleoporin NUP120; pro 81.7 2.5 8.4E-05 46.9 7.5 104 322-425 846-962 (1139)
332 4a5x_A MITD1, MIT domain-conta 80.7 4.6 0.00016 29.6 6.3 34 315-348 13-46 (86)
333 3mkq_A Coatomer beta'-subunit; 80.2 6.6 0.00023 41.0 10.0 26 319-344 682-707 (814)
334 4b4t_R RPN7, 26S proteasome re 78.9 3.1 0.0001 40.6 6.4 65 368-432 132-199 (429)
335 3kae_A CDC27, possible protein 78.1 29 0.001 29.0 13.2 115 318-433 62-240 (242)
336 1wy6_A Hypothetical protein ST 78.0 11 0.00038 30.3 8.0 60 370-429 93-153 (172)
337 2crb_A Nuclear receptor bindin 78.0 4.5 0.00015 29.8 5.3 38 313-350 10-47 (97)
338 4h7y_A Dual specificity protei 77.7 6 0.00021 32.4 6.6 72 329-416 71-142 (161)
339 3t5v_B Nuclear mRNA export pro 77.1 3 0.0001 40.9 5.7 103 332-434 140-254 (455)
340 3mkq_B Coatomer subunit alpha; 75.2 7.5 0.00025 32.7 6.8 45 378-427 16-60 (177)
341 2wpv_A GET4, UPF0363 protein Y 73.9 48 0.0017 30.5 12.7 111 315-425 30-158 (312)
342 3spa_A Mtrpol, DNA-directed RN 71.5 41 0.0014 36.5 12.9 99 319-429 128-229 (1134)
343 3ax2_A Mitochondrial import re 70.6 8 0.00027 27.3 5.0 39 312-350 11-49 (73)
344 1qsa_A Protein (soluble lytic 70.1 12 0.00041 38.3 8.3 54 376-429 294-347 (618)
345 2crb_A Nuclear receptor bindin 69.7 7.5 0.00026 28.6 4.7 26 368-393 16-41 (97)
346 2ijq_A Hypothetical protein; s 68.7 37 0.0013 27.9 9.5 72 318-396 32-104 (161)
347 4b4t_P 26S proteasome regulato 67.1 29 0.00098 33.8 10.1 74 315-396 174-247 (445)
348 1om2_A Protein (mitochondrial 65.0 15 0.0005 27.4 5.6 41 310-350 12-52 (95)
349 2vkj_A TM1634; membrane protei 63.9 30 0.001 25.2 6.9 34 315-348 50-83 (106)
350 3htx_A HEN1; HEN1, small RNA m 58.9 12 0.00041 39.6 5.7 66 60-125 559-652 (950)
351 4gq2_M Nucleoporin NUP120; bet 58.2 40 0.0014 36.3 10.1 93 322-414 844-949 (950)
352 3eab_A Spastin; spastin, MIT, 55.2 46 0.0016 24.3 6.8 67 314-380 12-85 (89)
353 2rkl_A Vacuolar protein sortin 55.1 24 0.00081 23.1 4.6 40 310-349 12-51 (53)
354 2cfu_A SDSA1; SDS-hydrolase, l 55.0 19 0.00066 37.0 6.6 52 368-419 450-501 (658)
355 2cwy_A Hypothetical protein TT 53.9 48 0.0016 24.5 6.9 63 322-395 5-67 (94)
356 2vkj_A TM1634; membrane protei 53.8 49 0.0017 24.1 6.5 54 360-413 46-102 (106)
357 2wb7_A PT26-6P; extra chromoso 53.2 45 0.0015 32.6 8.2 24 407-430 493-516 (526)
358 3t5x_A PCI domain-containing p 53.0 32 0.0011 29.5 6.8 36 366-401 13-48 (203)
359 3ax2_A Mitochondrial import re 51.4 20 0.00069 25.2 4.2 26 407-432 23-48 (73)
360 3qnk_A Putative lipoprotein; a 51.2 1.1E+02 0.0039 30.0 11.5 47 383-429 153-210 (517)
361 4gq2_M Nucleoporin NUP120; bet 51.1 19 0.00063 39.0 6.0 48 377-428 820-867 (950)
362 4b4t_S RPN3, 26S proteasome re 50.9 20 0.0007 35.5 5.7 73 318-400 231-303 (523)
363 2yin_A DOCK2, dedicator of cyt 49.2 51 0.0017 31.9 8.3 99 318-416 35-141 (436)
364 2cpt_A SKD1 protein, vacuolar 47.3 88 0.003 24.1 7.8 20 383-402 41-60 (117)
365 4a5x_A MITD1, MIT domain-conta 46.7 79 0.0027 22.8 7.9 25 371-395 20-44 (86)
366 2w2u_A Hypothetical P60 katani 46.3 79 0.0027 22.6 7.0 23 373-395 25-47 (83)
367 2o8p_A 14-3-3 domain containin 45.7 74 0.0025 27.7 7.8 72 318-396 120-197 (227)
368 2rpa_A Katanin P60 ATPase-cont 45.6 15 0.00052 26.2 2.9 27 370-396 15-41 (78)
369 2ijq_A Hypothetical protein; s 45.3 98 0.0034 25.3 8.2 60 371-430 36-104 (161)
370 4fhn_B Nucleoporin NUP120; pro 43.8 25 0.00084 38.8 5.7 50 375-428 820-869 (1139)
371 4aez_C MAD3, mitotic spindle c 43.5 1E+02 0.0036 26.7 8.4 47 385-431 132-180 (223)
372 2v6y_A AAA family ATPase, P60 42.0 92 0.0031 22.2 7.0 14 335-348 9-22 (83)
373 2dl1_A Spartin; SPG20, MIT, st 41.8 19 0.00066 27.7 3.1 25 370-394 25-49 (116)
374 4a1g_A Mitotic checkpoint seri 41.1 1.3E+02 0.0044 24.4 8.2 105 314-431 25-131 (152)
375 3myv_A SUSD superfamily protei 40.8 41 0.0014 32.7 6.2 31 366-396 189-219 (454)
376 3r9m_A BRO1 domain-containing 39.7 83 0.0028 29.7 8.0 30 401-430 253-282 (376)
377 3otn_A SUSD superfamily protei 39.4 1.4E+02 0.005 29.0 10.0 47 383-429 160-225 (482)
378 3myv_A SUSD superfamily protei 38.9 57 0.0019 31.7 6.9 48 383-430 164-219 (454)
379 2wvi_A Mitotic checkpoint seri 38.6 1.6E+02 0.0054 24.2 8.4 46 386-431 79-126 (164)
380 1om2_A Protein (mitochondrial 38.2 32 0.0011 25.5 3.7 25 372-396 25-49 (95)
381 3kez_A Putative sugar binding 38.0 46 0.0016 32.4 6.1 31 366-396 195-225 (461)
382 3lew_A SUSD-like carbohydrate 37.8 68 0.0023 31.5 7.3 31 366-396 202-232 (495)
383 2npm_A 14-3-3 domain containin 37.2 73 0.0025 28.4 6.6 53 335-395 173-226 (260)
384 3i4g_A SUSD-like carbohydrate 37.2 1.5E+02 0.005 29.4 9.7 48 383-430 167-227 (528)
385 2rpa_A Katanin P60 ATPase-cont 37.2 31 0.0011 24.6 3.4 32 318-349 12-43 (78)
386 2ymb_A MITD1, MIT domain-conta 37.1 7.1 0.00024 34.9 0.0 40 311-350 16-55 (257)
387 1wfd_A Hypothetical protein 15 36.6 1.2E+02 0.0042 22.1 8.8 19 383-401 38-56 (93)
388 3kez_A Putative sugar binding 36.4 77 0.0026 30.8 7.4 47 383-429 170-224 (461)
389 3lew_A SUSD-like carbohydrate 34.7 85 0.0029 30.8 7.4 48 383-430 174-232 (495)
390 3mcx_A SUSD superfamily protei 34.3 49 0.0017 32.3 5.6 31 366-396 201-231 (477)
391 3t5x_A PCI domain-containing p 34.1 1.3E+02 0.0046 25.4 7.7 37 315-351 11-47 (203)
392 3hdx_A SUSD homolog, SUSD supe 33.1 89 0.003 30.5 7.3 31 366-396 196-226 (478)
393 2br9_A 14-3-3E, 14-3-3 protein 33.0 67 0.0023 28.2 5.6 53 335-395 147-201 (234)
394 3mcx_A SUSD superfamily protei 32.6 84 0.0029 30.6 7.0 48 383-430 176-231 (477)
395 3spa_A Mtrpol, DNA-directed RN 31.6 1.6E+02 0.0056 32.0 9.2 62 368-429 128-193 (1134)
396 3snx_A SUSD homolog, putative 30.6 86 0.003 30.4 6.6 30 367-396 191-220 (460)
397 3ckc_A SUSD; TPR repeat, carbo 30.5 2.8E+02 0.0095 27.0 10.6 88 336-429 104-231 (527)
398 3t5v_B Nuclear mRNA export pro 30.5 1.9E+02 0.0064 28.1 8.9 83 313-400 171-254 (455)
399 3uzd_A 14-3-3 protein gamma; s 29.7 97 0.0033 27.4 6.1 53 335-395 148-202 (248)
400 1o9d_A 14-3-3-like protein C; 29.1 83 0.0029 28.0 5.6 53 335-395 152-206 (260)
401 3ubw_A 14-3-3E, 14-3-3 protein 28.9 86 0.0029 27.9 5.6 53 335-395 173-227 (261)
402 3iqu_A 14-3-3 protein sigma; s 28.6 1E+02 0.0036 26.9 6.1 54 334-395 149-204 (236)
403 2xze_A STAM-binding protein; h 28.4 1.1E+02 0.0038 24.5 5.8 46 309-354 31-80 (146)
404 2yhe_A SEC-alkyl sulfatase; hy 34.0 13 0.00043 38.5 0.0 53 368-420 462-514 (668)
405 3qnk_A Putative lipoprotein; a 27.7 1.1E+02 0.0039 30.0 7.1 31 366-396 181-211 (517)
406 3iv0_A SUSD homolog; NP_809186 27.0 3.4E+02 0.012 26.2 10.3 46 383-428 166-239 (481)
407 3esl_A Checkpoint serine/threo 25.4 3.1E+02 0.011 23.3 12.2 86 339-431 58-145 (202)
408 3i4g_A SUSD-like carbohydrate 24.4 1.5E+02 0.005 29.4 7.1 31 366-396 197-227 (528)
409 3efz_A 14-3-3 protein; 14-3-3, 24.3 95 0.0033 27.7 5.0 58 334-396 168-226 (268)
410 2oo2_A Hypothetical protein AF 23.7 1.6E+02 0.0054 21.3 5.2 38 311-348 28-65 (86)
411 3lvg_A Clathrin heavy chain 1; 23.0 0.35 1.2E-05 47.7 -11.7 74 322-423 148-221 (624)
412 2g0u_A Type III secretion syst 23.0 1.9E+02 0.0063 21.2 5.4 30 380-409 29-58 (92)
413 2pmr_A Uncharacterized protein 23.0 1.7E+02 0.0059 21.1 5.3 37 311-347 32-68 (87)
414 2zan_A Vacuolar protein sortin 22.8 18 0.00061 35.2 0.0 38 313-350 6-43 (444)
415 3snx_A SUSD homolog, putative 22.2 99 0.0034 30.0 5.3 48 383-430 160-220 (460)
416 3qtm_A Uncharacterized protein 21.7 4.4E+02 0.015 23.6 9.2 103 310-414 14-132 (346)
417 3ph0_C ASCG; type III secretio 21.5 1.8E+02 0.0062 19.2 6.1 51 370-421 9-60 (61)
418 3hdx_A SUSD homolog, SUSD supe 21.5 1.7E+02 0.0057 28.4 6.8 48 383-430 156-226 (478)
419 3r9m_A BRO1 domain-containing 21.4 1.7E+02 0.0057 27.5 6.6 62 335-396 216-282 (376)
420 2p4v_A Transcription elongatio 21.0 1.2E+02 0.0043 24.5 4.8 23 102-126 121-143 (158)
421 3s6n_M SurviVal motor neuron p 20.6 71 0.0024 18.7 2.2 16 416-431 17-32 (37)
422 3pmr_A Amyloid-like protein 1; 20.4 4.1E+02 0.014 22.8 8.4 66 367-433 93-160 (219)
423 2wm9_A Dedicator of cytokinesi 20.4 1.2E+02 0.0041 29.2 5.4 101 318-419 11-139 (428)
No 1
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=3.5e-57 Score=458.08 Aligned_cols=355 Identities=35% Similarity=0.599 Sum_probs=305.2
Q ss_pred ecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEE
Q 013755 43 LGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTF 122 (437)
Q Consensus 43 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~ 122 (437)
.+++||+|+++++|+|..+|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++|+||+++|.+|++|++++|
T Consensus 28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~-- 105 (457)
T 1kt0_A 28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHL-- 105 (457)
T ss_dssp -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEE--
T ss_pred CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEE--
Confidence 488999999999999954599999999999999989999999998888999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCC-CCCCCCcEEEEEEEeceeeeeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeec
Q 013755 123 TLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (437)
Q Consensus 123 ~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~~~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~ 201 (437)
+|||+++||..+.+ .||++++++|+|+|.++.. .++..|+++++++++.|.|+..|..++.|+++|
T Consensus 106 ~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~-~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y------------ 172 (457)
T 1kt0_A 106 LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG-EDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHL------------ 172 (457)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EETTSSSSEEEEEEECCBCSCCCCTTCEEEEEE------------
T ss_pred EEChHHhccccCCCCCCCCCCcEEEEEeeceeec-ccccCCcceEEEEEecCCCCCCCCCCCEEEEEE------------
Confidence 99999999999876 8999999999999999875 467789999999999999999999999888755
Q ss_pred cCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEcCCC---CcchHHHHHhcccccCcEEEEEEcCCCCCCcccc
Q 013755 202 TPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEE---QVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (437)
Q Consensus 202 ~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~---~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~ 278 (437)
+|++ +|++|+++ ++.|.+|++ .++++|+.|+..|++||++.|.++|.++|+..+.
T Consensus 173 ---------------~g~~-~g~~f~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~ 230 (457)
T 1kt0_A 173 ---------------EGRC-GGRMFDCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGK 230 (457)
T ss_dssp ---------------EEEE-TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCB
T ss_pred ---------------EEEe-CCeEEecC------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCC
Confidence 4445 56777765 589999976 4899999999999999999999999999999887
Q ss_pred ccccccCCCCceEEEEEEEeeeecccCCCCCChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHH
Q 013755 279 KRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDE 358 (437)
Q Consensus 279 ~~~~~~ip~~~~l~~~vel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~ 358 (437)
.. ..||+++.+.|.+++..+.+....|++..+.....+..++.+|+.+++.|+|++|+..|++|+.+.|....+.+++
T Consensus 231 ~~--~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~ 308 (457)
T 1kt0_A 231 PK--FGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKE 308 (457)
T ss_dssp GG--GTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHH
T ss_pred cc--cCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHH
Confidence 53 2599999999999999999999999999999999999999999999999999999999999999999887777788
Q ss_pred HHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 359 QKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 359 ~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
......+...+|+|+|.||+++++|++|+.+|++||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|+|.+
T Consensus 309 ~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~ 386 (457)
T 1kt0_A 309 SKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKA 386 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Confidence 888889999999999999999999999999999999999999999999999999999999999999999999999875
No 2
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=1e-45 Score=360.18 Aligned_cols=263 Identities=54% Similarity=0.904 Sum_probs=126.7
Q ss_pred CCCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCc
Q 013755 37 VGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (437)
Q Consensus 37 ~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~ 116 (437)
.+++..++++||+|+++++|+|+..|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++|+||+++|.+|++|+
T Consensus 2 ~~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 2 VGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCC
Confidence 45666789999999999999997889999999999999999999999999888999999999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEeceeeeeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCC
Q 013755 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGD 195 (437)
Q Consensus 117 ~~~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~~~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~ 195 (437)
+++| +|||++|||..+.+ .||++++++|+|+|+++....++..|+.+.++++++|.|+.+|..++.|+++|++++.+
T Consensus 82 ~~~~--~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~d 159 (356)
T 3jxv_A 82 NALF--TIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLED 159 (356)
T ss_dssp --------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT
T ss_pred EEEE--EEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECC
Confidence 9999 99999999999988 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccC------------------------------------------------------CCCeeEEEE---------
Q 013755 196 GTMVAKTP------------------------------------------------------EEGVEFYLK--------- 212 (437)
Q Consensus 196 g~~v~~~~------------------------------------------------------~~~~~~~~~--------- 212 (437)
|+++.++. ...+.|.+.
T Consensus 160 gt~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~d 239 (356)
T 3jxv_A 160 GTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTE 239 (356)
T ss_dssp SCEEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEE
T ss_pred CCEEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccc
Confidence 98765420 001111111
Q ss_pred ---------------------------EEEEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEE
Q 013755 213 ---------------------------DVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIV 265 (437)
Q Consensus 213 ---------------------------~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i 265 (437)
.+||++++.||++|+++.+..+.|+.|.+|.+++|+||+.+|.+|++||++.|
T Consensus 240 v~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v 319 (356)
T 3jxv_A 240 IGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALV 319 (356)
T ss_dssp ESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEE
T ss_pred cccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEE
Confidence 19999999999999987456689999999999999999999999999999999
Q ss_pred EEcCCCCCCccccccccccCCCCceEEEEEEEeeeec
Q 013755 266 TINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (437)
Q Consensus 266 ~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~ 302 (437)
.|||+++||+.+... ...||++++++|+|+|+++.+
T Consensus 320 ~ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 320 TIPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EEChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 999999999887532 136999999999999999875
No 3
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=3.4e-41 Score=315.71 Aligned_cols=227 Identities=37% Similarity=0.628 Sum_probs=202.8
Q ss_pred ecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEE
Q 013755 43 LGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTF 122 (437)
Q Consensus 43 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~ 122 (437)
.+++||+|+++++|+|..+|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 48 ~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v-- 125 (280)
T 1q1c_A 48 KQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHI-- 125 (280)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEE--
T ss_pred CCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEE--
Confidence 378999999999999955599999999999999999999999998778999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCC-CCCCCCcEEEEEEEeceeeeeccC--CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeee
Q 013755 123 TLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMV 199 (437)
Q Consensus 123 ~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~~~~d~~--~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v 199 (437)
+|||+++||..+.+ .||++++++|+|+|.++.. .++. .|+++.++++++|.|+..|..++.|+++|..+
T Consensus 126 ~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~------- 197 (280)
T 1q1c_A 126 TCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGY------- 197 (280)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEE-------
T ss_pred EECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceEEEEEEEE-------
Confidence 99999999998876 8999999999999999875 3555 88999999999999988899999998876554
Q ss_pred eccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEcCCCC---cchHHHHHhcccccCcEEEEEEcCCCCCCcc
Q 013755 200 AKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQ---VIAGLDRVAATMKKEEWAIVTINHEYGFGNV 276 (437)
Q Consensus 200 ~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~---~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~ 276 (437)
+ ||++|+++ |+.|.+|.+. +++||+.+|.+|++||++.|.|||+++||..
T Consensus 198 --------------------~-dG~~fd~~------~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~ 250 (280)
T 1q1c_A 198 --------------------Y-KDKLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSV 250 (280)
T ss_dssp --------------------E-TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTT
T ss_pred --------------------e-CCEEEecC------CeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcC
Confidence 3 56667764 8999999987 5999999999999999999999999999988
Q ss_pred ccccccccCCCCceEEEEEEEeeeecccCCCC
Q 013755 277 EAKRDLATIPSCAKLYYEVEMMDFIKEKVPWE 308 (437)
Q Consensus 277 ~~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~ 308 (437)
+.+. ..||+++++.|+|+|+++.+.++.|+
T Consensus 251 ~~~~--~~IP~~~~l~f~V~L~~i~~~~~~W~ 280 (280)
T 1q1c_A 251 GKEK--FQIPPNAELKYELHLKSFEKAKESWE 280 (280)
T ss_dssp CBGG--GTBCTTCCEEEEEEEEEEECCCC---
T ss_pred CCcc--CccCCCCeEEEEEEEEEEeCCCCCCC
Confidence 7653 14999999999999999999998885
No 4
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=2.2e-35 Score=286.76 Aligned_cols=246 Identities=32% Similarity=0.515 Sum_probs=207.3
Q ss_pred CccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEc
Q 013755 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFIT 241 (437)
Q Consensus 162 dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~l 241 (437)
+.++.++|+++|.|. .|..++.|+|+|.+++.+ +|++||++ |.++.|+.|.+
T Consensus 48 ~~~~~~~~~~~g~g~-~~~~gd~v~v~y~g~~~~--------------------------~g~~fd~~-~~~~~~~~~~l 99 (338)
T 2if4_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKN--------------------------SQHKFEDT-WHEQQPIELVL 99 (338)
T ss_dssp ETTEEEEEEECCBSC-CCCTTCEEEEEEEEEETT--------------------------TCCCCEEH-HHHTCCEEEET
T ss_pred CCCeEEEEEeCCCCC-CCCCCCEEEEEEEEEEcC--------------------------CCcEeecc-cCCCCCeEEEc
Confidence 457899999999996 788889988866554321 36778887 67788999999
Q ss_pred CCC-CcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeeccc---CCCCCChHHHHHH
Q 013755 242 DEE-QVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEK---VPWEMNNQGKIEA 317 (437)
Q Consensus 242 g~~-~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~~---~~~~~~~~~~~~~ 317 (437)
|.+ .+|+||+.+|.+|++||++.|+||+.++||..+... ...||+++++.|.|+|+.+.... ..|.++.++++..
T Consensus 100 g~~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~ 178 (338)
T 2if4_A 100 GKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGA 178 (338)
T ss_dssp TSCCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHH
T ss_pred CCCCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHH
Confidence 998 899999999999999999999999999999988631 13699999999999999988644 4788999999999
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCC--CChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS--FVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~--~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
+..++..|+.+++.|+|++|+..|++|+.+.|.+.. ......+....+...+|+|+|.||+++++|++|+.+|+++|+
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999876431 111222344555667999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
++|++.++|+++|.+|..+|+|++|+.+|+++++++|+|++
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~ 299 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKA 299 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH
Confidence 99999999999999999999999999999999999999875
No 5
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=1.2e-33 Score=274.29 Aligned_cols=244 Identities=35% Similarity=0.586 Sum_probs=222.6
Q ss_pred eeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCC
Q 013755 156 VVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQ 235 (437)
Q Consensus 156 ~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~ 235 (437)
..+++.|+++.++|+++|.|...|..++.|+|+| ++++ +|++||++
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y---------------------------~g~~-~g~~fd~~------ 63 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVAL---------------------------EGYY-KDKLFDQR------ 63 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSCCCCTTCEEEEEE---------------------------EEEE-TTEEEEEE------
T ss_pred ceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEE---------------------------EEEE-CCEEEecC------
Confidence 4567789999999999999988899998888755 4455 67788876
Q ss_pred CeEEEcCCCC---cchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeecccCCCCCChH
Q 013755 236 PLEFITDEEQ---VIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQ 312 (437)
Q Consensus 236 p~~f~lg~~~---~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~~~~~ 312 (437)
|+.|.+|.+. ++++|+.|+..|++||++.|.++|+++||..|... ..||+++.+.|+++|.++.+....|.+..+
T Consensus 64 ~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~ 141 (336)
T 1p5q_A 64 ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNSE 141 (336)
T ss_dssp EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCHH
T ss_pred CeEEEeCCCCccccchHHHHHHhcCCCCCeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCHH
Confidence 8999999886 58999999999999999999999999999988763 248999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHH
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSK 392 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~ 392 (437)
.....+..++..|+.+++.|+|++|+..|++|+.+.|.......++......+...+++|+|.||+++++|++|+.+|++
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999998877777777888888899999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 393 VLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 393 al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|+++|+++++|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999999999999999999999885
No 6
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.97 E-value=1e-30 Score=253.76 Aligned_cols=288 Identities=18% Similarity=0.195 Sum_probs=175.2
Q ss_pred CCccCCCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeEEEeCCc-cccccHHHHhc
Q 013755 33 APLKVGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTG-QVATGLDNGII 110 (437)
Q Consensus 33 ~~~~~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~-~G~~~~st~~~~~p~~~~~g~~-~~~~g~~~~l~ 110 (437)
.+..+.....++++|++|+++++|+| ..|..||.|+|||++++. +|++|++|+..+.|+.|.+|.+ ++|+||+++|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~ 114 (338)
T 2if4_A 36 VPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVA 114 (338)
T ss_dssp CCCCCCSCCEEEETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHH
T ss_pred CCCCCCcCceeCCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHh
Confidence 34455566778899999999999999 799999999999999998 4999999987778999999999 99999999999
Q ss_pred cccCCceEEEEEecCCCCCCCCCCC---CCCCCCCcEEEEEEEeceeeeeccCCCccceEEEEeccccCCCCCCCCeEEE
Q 013755 111 TMKKRECAVFTFTLPSELRFGVEGR---DSLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLV 187 (437)
Q Consensus 111 ~m~~G~~~~~~~~ip~~~ayg~~~~---~~i~~~~~~~f~v~l~~~~~~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v 187 (437)
+|++|++++| +|||.++||..+. +.||++++++|+|+|..+....+... -+.....
T Consensus 115 ~m~~Ge~~~~--~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~-------------~~~~~~~------ 173 (338)
T 2if4_A 115 SMKSGERALV--HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKA-------------RSDMTVE------ 173 (338)
T ss_dssp HCCBTCEEEE--EECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBT-------------TTBCCHH------
T ss_pred cCCCCCeEEE--EECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccc-------------cccCCHH------
Confidence 9999999999 9999999999986 58999999999999888753221000 0000000
Q ss_pred EEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEcCC-CCcchHHHHHhcccccCcEEEEE
Q 013755 188 KYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDE-EQVIAGLDRVAATMKKEEWAIVT 266 (437)
Q Consensus 188 ~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~-~~~~~gl~~~l~~m~~GE~~~i~ 266 (437)
...... ......|..+. ..|+ ...+..++.++....
T Consensus 174 ---------~~~~~a--------------~~~~~~g~~~~------------~~g~~~~A~~~y~~Al~~~p-------- 210 (338)
T 2if4_A 174 ---------ERIGAA--------------DRRKMDGNSLF------------KEEKLEEAMQQYEMAIAYMG-------- 210 (338)
T ss_dssp ---------HHHHHH--------------HHHHHHHHHTC------------SSSCCHHHHHHHHHHHHHSC--------
T ss_pred ---------HHHHHH--------------HHHHHHHHHHH------------hcCCHHHHHHHHHHHHHHhc--------
Confidence 000000 00000011100 0010 012333444433210
Q ss_pred EcCCCCCCccccccccccCCCCceEEEEEEEeeeecccCCCCCC--hHHH--HHHHHHHHHHhhHHHhCCcHHHHHHHHH
Q 013755 267 INHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMN--NQGK--IEAAGRKKEEGNLLFKNGKYERAGKKYN 342 (437)
Q Consensus 267 i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~~~--~~~~--~~~~~~~~~~g~~~~~~g~~~~A~~~y~ 342 (437)
.+. .+... ..+. .-....+.+.|..+++.++|++|+..|+
T Consensus 211 --------------------~~~----------------~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 211 --------------------DDF----------------MFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp --------------------HHH----------------HHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred --------------------cch----------------hhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 000 00000 0011 1122478899999999999999999999
Q ss_pred HHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHhccHHHHH
Q 013755 343 KAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAY-MEIADLILAE 421 (437)
Q Consensus 343 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~-~~lg~~~~A~ 421 (437)
++|.+.|.+ ..+|+++|.+|..+++|++|+.+|+++++++|++..++..++.+. ...+..++|.
T Consensus 255 ~al~~~p~~---------------~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~ 319 (338)
T 2if4_A 255 IVLTEEEKN---------------PKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQK 319 (338)
T ss_dssp HHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------------
T ss_pred HHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998764 377999999999999999999999999999999999999999984 4567788999
Q ss_pred HHHHHHHHhCCCCCC
Q 013755 422 LDIKKAIEADPQNRN 436 (437)
Q Consensus 422 ~~~~~al~l~P~n~~ 436 (437)
..|++++.+.|+++.
T Consensus 320 ~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 320 EMYKGIFKGKDEGGA 334 (338)
T ss_dssp ---------------
T ss_pred HHHHHhhCCCCCCCC
Confidence 999999999998864
No 7
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.95 E-value=1.1e-27 Score=241.99 Aligned_cols=248 Identities=24% Similarity=0.292 Sum_probs=159.6
Q ss_pred eccC--CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCC
Q 013755 157 VDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (437)
Q Consensus 157 ~d~~--~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~ 234 (437)
.+++ .++++.++|+++|.|...|..++.|+|+|..+ +.||++||++ +.++
T Consensus 23 ~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~---------------------------~~~g~~~dss-~~~~ 74 (457)
T 1kt0_A 23 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGK---------------------------LSNGKKFDSS-HDRN 74 (457)
T ss_dssp ----------CEEEC--------CCCBTCEEEEEEEEE---------------------------C-----CBC------
T ss_pred ccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEE---------------------------ECCCCEEecc-CCCC
Confidence 3555 78899999999999987799999988866554 4466778877 7778
Q ss_pred CCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeecccCC--------
Q 013755 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVP-------- 306 (437)
Q Consensus 235 ~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~~~~-------- 306 (437)
.|+.|.+|.+.+++||+.+|.+|++||++.|+|||.++||..+.+. .||++++++|+|+|+++......
T Consensus 75 ~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~---~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~ 151 (457)
T 1kt0_A 75 EPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLP---KIPSNATLFFEIELLDFKGEDLFEDGGIIRR 151 (457)
T ss_dssp -CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEECEETTSSSSEEEE
T ss_pred CCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEChHHhccccCCCC---CCCCCCcEEEEEeeceeecccccCCcceEEE
Confidence 8999999999999999999999999999999999999999988765 69999999999999988653111
Q ss_pred -------CCCChHH---------HH-----HH--HHHHHHHhhHHHhCCcHHHHHHHHHH----HHHhhccCCC------
Q 013755 307 -------WEMNNQG---------KI-----EA--AGRKKEEGNLLFKNGKYERAGKKYNK----AADCVSEDGS------ 353 (437)
Q Consensus 307 -------~~~~~~~---------~~-----~~--~~~~~~~g~~~~~~g~~~~A~~~y~~----al~~~~~~~~------ 353 (437)
+...... .+ .. .......|....-...++.|+..+++ +|.+.|...-
T Consensus 152 i~~~g~~~~~p~~g~~V~v~y~g~~~g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~ 231 (457)
T 1kt0_A 152 TKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKP 231 (457)
T ss_dssp EEECCBCSCCCCTTCEEEEEEEEEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBG
T ss_pred EEecCCCCCCCCCCCEEEEEEEEEeCCeEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCc
Confidence 1000000 00 00 00000001111111244555555444 3333221100
Q ss_pred ----------------------CC-hHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCC----------
Q 013755 354 ----------------------FV-DDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHN---------- 400 (437)
Q Consensus 354 ----------------------~~-~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~---------- 400 (437)
.. -+...........++.++|.+++++++|++|+.+|++|++++|.+
T Consensus 232 ~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~ 311 (457)
T 1kt0_A 232 KFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKA 311 (457)
T ss_dssp GGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHH
T ss_pred ccCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHH
Confidence 00 000112233456789999999999999999999999999999998
Q ss_pred -----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 401 -----VKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 401 -----~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..+|+++|.||+.+++|++|+.+|++||+++|+|.
T Consensus 312 ~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~ 351 (457)
T 1kt0_A 312 SESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANE 351 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH
Confidence 79999999999999999999999999999999875
No 8
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.93 E-value=3.1e-25 Score=215.04 Aligned_cols=267 Identities=21% Similarity=0.277 Sum_probs=197.9
Q ss_pred eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCcc---ccccHHHHhccccCCceE
Q 013755 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQ---VATGLDNGIITMKKRECA 118 (437)
Q Consensus 42 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~---~~~g~~~~l~~m~~G~~~ 118 (437)
.++++||+|+|+++|+|..+|..||.|+|||++++ +|++|++| |+.|.+|.|. ++++|+++|.+|++|+++
T Consensus 21 ~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~ 94 (336)
T 1p5q_A 21 MEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 94 (336)
T ss_dssp -CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred ecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCeE
Confidence 45889999999999999658999999999999999 99999986 7999999887 589999999999999999
Q ss_pred EEEEecCCCCCCCCCCCC--CCCCCCcEEEEEEEeceeeeeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCC
Q 013755 119 VFTFTLPSELRFGVEGRD--SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDG 196 (437)
Q Consensus 119 ~~~~~ip~~~ayg~~~~~--~i~~~~~~~f~v~l~~~~~~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g 196 (437)
.+ .|+|+++||..+.. .||+++.+.|++.|..+........ +.+.. .|...
T Consensus 95 ~l--~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~------~a~~~-----~p~~a-------------- 147 (336)
T 1p5q_A 95 IV--YLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWE------MNSEE-----KLEQS-------------- 147 (336)
T ss_dssp EE--EECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGG------CCHHH-----HHHHH--------------
T ss_pred EE--EECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhc------CCHHH-----HHHHH--------------
Confidence 99 99999999999977 6999999999999888743221110 00000 00000
Q ss_pred eeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEcCC-CCcchHHHHHhcccccCcEEEEEEcCCCCCCc
Q 013755 197 TMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDE-EQVIAGLDRVAATMKKEEWAIVTINHEYGFGN 275 (437)
Q Consensus 197 ~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~-~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~ 275 (437)
.... .-|..+ +..|+ ...+..++.++...
T Consensus 148 ~~~~--------------------~~g~~~------------~~~g~~~~A~~~y~~Al~~~------------------ 177 (336)
T 1p5q_A 148 TIVK--------------------ERGTVY------------FKEGKYKQALLQYKKIVSWL------------------ 177 (336)
T ss_dssp HHHH--------------------HHHHHH------------HHHTCHHHHHHHHHHHHHHT------------------
T ss_pred HHHH--------------------HHHHHH------------HHCCCHHHHHHHHHHHHHHh------------------
Confidence 0000 001100 01111 02233444444321
Q ss_pred cccccccccCCCCceEEEEEEEeeeecccCCCCCChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCC
Q 013755 276 VEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFV 355 (437)
Q Consensus 276 ~~~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~ 355 (437)
|.... +. .+.........+..+.+.|..+++.|+|++|+..|++|+.+.|.+
T Consensus 178 ----------p~~~~---------~~-----~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---- 229 (336)
T 1p5q_A 178 ----------EYESS---------FS-----NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN---- 229 (336)
T ss_dssp ----------TTCCC---------CC-----SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----
T ss_pred ----------hcccc---------CC-----hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----
Confidence 11000 00 000112233446888999999999999999999999999998764
Q ss_pred hHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHH-HHHHHHHHHh
Q 013755 356 DDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILA-ELDIKKAIEA 430 (437)
Q Consensus 356 ~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A-~~~~~~al~l 430 (437)
..+++++|.+|..+|+|++|+.+|+++++++|++..++++++.++..++++++| ...|++++..
T Consensus 230 -----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 230 -----------EKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp -----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 377999999999999999999999999999999999999999999999999999 5567776643
No 9
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.92 E-value=8.5e-25 Score=182.35 Aligned_cols=121 Identities=44% Similarity=0.746 Sum_probs=104.1
Q ss_pred cCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEe
Q 013755 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFT 123 (437)
Q Consensus 44 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ 123 (437)
+++|++|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++| +
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v--~ 89 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEF--T 89 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEE--E
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEE--E
Confidence 78999999999999955799999999999999999999999987668999999999999999999999999999999 9
Q ss_pred cCCCCCCCCCCCC-CCCCCCcEEEEEEEeceeeeeccC--CCccceE
Q 013755 124 LPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLS--KDGGIVK 167 (437)
Q Consensus 124 ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~~~~d~~--~dg~v~k 167 (437)
|||+++||..+.+ .||++++++|+|+|.++... ++. +||+++|
T Consensus 90 ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~-~l~~~~d~~v~k 135 (135)
T 1r9h_A 90 IRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE-DISPDRDGTILR 135 (135)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC--------------
T ss_pred EChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC-CcCcCCCCcccC
Confidence 9999999998875 89999999999999998753 454 7777654
No 10
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.92 E-value=2e-24 Score=174.78 Aligned_cols=109 Identities=40% Similarity=0.635 Sum_probs=102.9
Q ss_pred eecCCCeEEEEEEccCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEE
Q 013755 42 GLGNSGIKKKLLKNGVDWDT-PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (437)
Q Consensus 42 ~~~~~g~~~~~~~~G~g~~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~ 120 (437)
.++++|++|+++++|+| .. |+.||.|+|||++++.||++|++|+..+.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 2 ~~~~~g~~~~~~~~G~g-~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v 80 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDG-ATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARL 80 (113)
T ss_dssp EECGGGCEEEEEECCCS-SCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEE
T ss_pred CCCCCCeEEEEEECCCC-cccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEE
Confidence 36789999999999999 66 99999999999999999999999998778999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCC-CCCCCCcEEEEEEEece
Q 013755 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (437)
Q Consensus 121 ~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~ 153 (437)
.|||+++||..+.+ .||++++++|+|+|.++
T Consensus 81 --~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 81 --TIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred --EECHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999999999865 79999999999999876
No 11
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.91 E-value=2.6e-24 Score=175.92 Aligned_cols=108 Identities=41% Similarity=0.671 Sum_probs=101.5
Q ss_pred cCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCC-------CCCeEEEeCCccccccHHHHhccccCCc
Q 013755 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDR-------YDPLTFKLGTGQVATGLDNGIITMKKRE 116 (437)
Q Consensus 44 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~-------~~p~~~~~g~~~~~~g~~~~l~~m~~G~ 116 (437)
.|+|++|+++++|+|...|+.||.|+|||++++.||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 589999999999999567999999999999999999999999863 4899999999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCC--CCCCCCcEEEEEEEece
Q 013755 117 CAVFTFTLPSELRFGVEGRD--SLPPNSVVQFEVELVSW 153 (437)
Q Consensus 117 ~~~~~~~ip~~~ayg~~~~~--~i~~~~~~~f~v~l~~~ 153 (437)
+++| .|||++|||..+.+ .||++++++|+|+|+++
T Consensus 82 ~~~v--~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARL--EIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEE--EECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEE--EECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999 99999999999876 79999999999999875
No 12
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.91 E-value=1e-24 Score=183.83 Aligned_cols=115 Identities=38% Similarity=0.654 Sum_probs=106.6
Q ss_pred CCce-eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCc
Q 013755 38 GEER-GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (437)
Q Consensus 38 ~~~~-~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~ 116 (437)
++++ ..+++||+|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++|+||+++|.+|++|+
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge 105 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGE 105 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTC
T ss_pred cccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCC
Confidence 3444 347999999999999995589999999999999999999999999888999999999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEecee
Q 013755 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (437)
Q Consensus 117 ~~~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~ 154 (437)
+++| +|||+++||..+.+ .||++++++|+|+|+++.
T Consensus 106 ~~~v--~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 106 ICHL--LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp EEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEE--EEChHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 9999 99999999999876 899999999999999874
No 13
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.91 E-value=3.6e-24 Score=177.69 Aligned_cols=110 Identities=40% Similarity=0.688 Sum_probs=104.3
Q ss_pred eeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEE
Q 013755 41 RGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (437)
Q Consensus 41 ~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~ 120 (437)
..++++|++|+++++|+| ..|+.||.|+|||++++.||++|++|++.+.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 23 ~~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 23 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp CEECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred cEECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 457899999999999999 8999999999999999999999999998778999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCC-CCCCCCcEEEEEEEece
Q 013755 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (437)
Q Consensus 121 ~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~ 153 (437)
.|||+++||..+.+ .||++++++|+|+|+++
T Consensus 102 --~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 --TIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred --EECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 99999999999876 79999999999999764
No 14
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.91 E-value=2e-24 Score=178.51 Aligned_cols=111 Identities=38% Similarity=0.646 Sum_probs=104.7
Q ss_pred eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEE
Q 013755 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFT 121 (437)
Q Consensus 42 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~ 121 (437)
..+++|++|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 15 ~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v- 93 (128)
T 3o5q_A 15 SKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHL- 93 (128)
T ss_dssp SSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEE-
T ss_pred ccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEE-
Confidence 3588999999999999955799999999999999999999999988778999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCCC-CCCCCCcEEEEEEEecee
Q 013755 122 FTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (437)
Q Consensus 122 ~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~ 154 (437)
.|||++|||..+.+ .||++++++|+|+|+++.
T Consensus 94 -~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 94 -LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp -EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred -EEChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 99999999999876 899999999999999874
No 15
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.91 E-value=1.7e-23 Score=203.36 Aligned_cols=161 Identities=35% Similarity=0.580 Sum_probs=148.3
Q ss_pred cCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEe
Q 013755 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFT 123 (437)
Q Consensus 44 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ 123 (437)
.+.++.++++++|.|+.+|..||.|+|||++++.||++|+++ .++.|.+|.+++++||+++|.+|++||++++ +
T Consensus 125 ~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~----~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~--~ 198 (356)
T 3jxv_A 125 KDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKS----EGVEFTVKDGHLCPALAKAVKTMKKGEKVLL--A 198 (356)
T ss_dssp SSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEE----EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEE--E
T ss_pred cCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEecc----CCEEEEeCCCCcchHHHHHHhhCCCCCEEEE--E
Confidence 678999999999999999999999999999999999999997 3699999999999999999999999999999 9
Q ss_pred cCCCCCCCCCCCC------CCCCCCcEEEEEEEeceeeeeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCe
Q 013755 124 LPSELRFGVEGRD------SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGT 197 (437)
Q Consensus 124 ip~~~ayg~~~~~------~i~~~~~~~f~v~l~~~~~~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~ 197 (437)
|||+++||+.+.+ .||+++++.|+|+|.++....++..|+++.++++++|.|+..|..++.|+++|..++.+|+
T Consensus 199 v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~ 278 (356)
T 3jxv_A 199 VKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGT 278 (356)
T ss_dssp ECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSC
T ss_pred EChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCC
Confidence 9999999999876 4999999999999999998889999999999999999999999999999999999999998
Q ss_pred eeeccC---CCCeeEE
Q 013755 198 MVAKTP---EEGVEFY 210 (437)
Q Consensus 198 ~v~~~~---~~~~~~~ 210 (437)
++.++. ..++.|.
T Consensus 279 ~fd~~~~~~~~p~~f~ 294 (356)
T 3jxv_A 279 VFLKKGHDEQEPFEFK 294 (356)
T ss_dssp EEEEESCTTSCCCEEE
T ss_pred EEeeccccCCcCEEEE
Confidence 776542 3445553
No 16
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.91 E-value=8.6e-24 Score=184.51 Aligned_cols=122 Identities=27% Similarity=0.446 Sum_probs=111.1
Q ss_pred CCccCCCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeEEEeCCc-cccccHHHHhc
Q 013755 33 APLKVGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTG-QVATGLDNGII 110 (437)
Q Consensus 33 ~~~~~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~-~G~~~~st~~~~~p~~~~~g~~-~~~~g~~~~l~ 110 (437)
.+.+....+.++++|++|+++++|+| ..|+.||.|+|||++++. +|++|++|+.++.|+.|.+|.+ ++++||+++|.
T Consensus 36 ~p~~~~~~~~~~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~ 114 (180)
T 2f4e_A 36 VPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVA 114 (180)
T ss_dssp SCCCCCSCCEEEETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHT
T ss_pred CCcccCCCcEECCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHh
Confidence 34455566778999999999999999 899999999999999998 6999999998889999999999 99999999999
Q ss_pred cccCCceEEEEEecCCCCCCCCCCC---CCCCCCCcEEEEEEEeceeeee
Q 013755 111 TMKKRECAVFTFTLPSELRFGVEGR---DSLPPNSVVQFEVELVSWITVV 157 (437)
Q Consensus 111 ~m~~G~~~~~~~~ip~~~ayg~~~~---~~i~~~~~~~f~v~l~~~~~~~ 157 (437)
+|++|++++| +|||+++||..+. +.||++++++|+|+|+++....
T Consensus 115 gMk~Ge~~~v--~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~ 162 (180)
T 2f4e_A 115 SMKSGERALV--HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETK 162 (180)
T ss_dssp TCCBTCEEEE--EECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBC
T ss_pred CCCCCCEEEE--EECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCc
Confidence 9999999999 9999999999985 5899999999999999986543
No 17
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.91 E-value=8e-24 Score=174.45 Aligned_cols=112 Identities=29% Similarity=0.496 Sum_probs=104.9
Q ss_pred eeecCCCeEEEEEEccC--CCCCCCCCCEEEEEEEEEEc-CCcEEecccC--CCCCeEEEeCCccccccHHHHhccccCC
Q 013755 41 RGLGNSGIKKKLLKNGV--DWDTPEFGDEVTIHYVGTLL-DGTKFDSTRD--RYDPLTFKLGTGQVATGLDNGIITMKKR 115 (437)
Q Consensus 41 ~~~~~~g~~~~~~~~G~--g~~~~~~gd~V~v~y~~~~~-~G~~~~st~~--~~~p~~~~~g~~~~~~g~~~~l~~m~~G 115 (437)
..++++|++|+++++|+ | ..|+.||.|+|||++++. ||++|++|+. .+.|+.|.+|.+++++||+++|.+|++|
T Consensus 7 ~~~~~~gl~~~~l~~g~~~g-~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 7 ALIPEPEVKIEVLQKPFICH-RKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp GGCCCCCCEEEEEECCSCCS-CCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred eEECCCCeEEEEEEcCCCCC-CcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 34688999999999998 6 899999999999999998 9999999984 4589999999999999999999999999
Q ss_pred ceEEEEEecCCCCCCCCCCCCCCCCCCcEEEEEEEeceee
Q 013755 116 ECAVFTFTLPSELRFGVEGRDSLPPNSVVQFEVELVSWIT 155 (437)
Q Consensus 116 ~~~~~~~~ip~~~ayg~~~~~~i~~~~~~~f~v~l~~~~~ 155 (437)
++++| .|||++|||..+.+.||++++++|+|+|+++..
T Consensus 86 e~~~~--~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 86 EKRKL--IIPPALGYGKEGKGKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp CEEEE--EECGGGTTTTTCBTTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEE--EEChHHhcCCCCCCCCCCCCeEEEEEEEEEEEc
Confidence 99999 999999999999889999999999999999753
No 18
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=184.83 Aligned_cols=87 Identities=24% Similarity=0.334 Sum_probs=82.2
Q ss_pred eecCCCeEEEEEEccCCCCC--CCCCCEEEEEEEEEEc--CCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCce
Q 013755 42 GLGNSGIKKKLLKNGVDWDT--PEFGDEVTIHYVGTLL--DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (437)
Q Consensus 42 ~~~~~g~~~~~~~~G~g~~~--~~~gd~V~v~y~~~~~--~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~ 117 (437)
.++++||+|+++++|+| .. ++.||.|+|||++++. ||++||||++++.|+.|.+|.+++|+||+++|.+|++|++
T Consensus 6 ~~~~~Gv~~~vl~~G~G-~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRG-ELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHHTTSCCCCEEECCSS-CCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCE
T ss_pred cccCCCeEEEEEECCcC-CCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCce
Confidence 46899999999999999 54 4689999999999996 5999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCCC
Q 013755 118 AVFTFTLPSELRFG 131 (437)
Q Consensus 118 ~~~~~~ip~~~ayg 131 (437)
++| +|||++|||
T Consensus 85 ~~~--~ipp~laYG 96 (165)
T 2lkn_A 85 AQF--LCDIKHVVL 96 (165)
T ss_dssp EEE--ECCHHHHSS
T ss_pred EEE--EECHHHhcC
Confidence 999 999999999
No 19
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.90 E-value=8.9e-24 Score=174.75 Aligned_cols=109 Identities=41% Similarity=0.738 Sum_probs=102.4
Q ss_pred eecCCCeEEE--EEEccCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceE
Q 013755 42 GLGNSGIKKK--LLKNGVDWDT-PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (437)
Q Consensus 42 ~~~~~g~~~~--~~~~G~g~~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~ 118 (437)
..+++|++|+ ++++|+| .. |+.||.|+|+|++++.||++|++|+..+.|+.|.+|.+++++||+++|.+|++|+++
T Consensus 18 ~~~~~Gl~~~K~~l~~G~G-~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~ 96 (130)
T 2lgo_A 18 GPGSMSAQLEKKVLTPGDG-VTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKA 96 (130)
T ss_dssp SSSSSSCCCCEEEEECCCS-SCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEE
T ss_pred eeCCCceEEEEEEEeccCC-CccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEE
Confidence 4588999999 9999999 66 999999999999999899999999987789999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEece
Q 013755 119 VFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (437)
Q Consensus 119 ~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~ 153 (437)
+| .|||+++||..+.+ .||++++++|+|+|.++
T Consensus 97 ~v--~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 97 LF--TIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EE--EECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred EE--EECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99 99999999999876 79999999999999764
No 20
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.90 E-value=1.1e-23 Score=168.79 Aligned_cols=105 Identities=33% Similarity=0.668 Sum_probs=98.5
Q ss_pred CeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCC
Q 013755 47 GIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPS 126 (437)
Q Consensus 47 g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~ 126 (437)
||+|+++++|+|...|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+++++||+++|.+|++|++++| .|||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~--~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKL--TISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEE--EECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEE--EECH
Confidence 79999999999933499999999999999999999999987668999999999999999999999999999999 9999
Q ss_pred CCCCCCCCCC-CCCCCCcEEEEEEEece
Q 013755 127 ELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (437)
Q Consensus 127 ~~ayg~~~~~-~i~~~~~~~f~v~l~~~ 153 (437)
+++||..+.+ .||++++++|+|+|.++
T Consensus 79 ~~ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 79 DYAYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred HHccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 9999999875 89999999999999875
No 21
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.90 E-value=8.7e-24 Score=181.56 Aligned_cols=112 Identities=32% Similarity=0.559 Sum_probs=104.7
Q ss_pred CceeecCCCeEEEEEEccCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCce
Q 013755 39 EERGLGNSGIKKKLLKNGVDWDT-PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (437)
Q Consensus 39 ~~~~~~~~g~~~~~~~~G~g~~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~ 117 (437)
..+.++++|++|+++++|+| .. |..||.|+|||++++.||++|++|+.++.|+.|.+| ++|+||+++|.+|++|++
T Consensus 30 ~~~~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~ 106 (167)
T 1jvw_A 30 PDAVKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGDR 106 (167)
T ss_dssp TTEEECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTCE
T ss_pred CCcEECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCCE
Confidence 35678999999999999999 76 999999999999999999999999887789999995 999999999999999999
Q ss_pred EEEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEeceee
Q 013755 118 AVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWIT 155 (437)
Q Consensus 118 ~~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~~ 155 (437)
++| +|||+++||..+.+ .||++++++|+|+|+++..
T Consensus 107 ~~~--~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 107 WRL--FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKD 143 (167)
T ss_dssp EEE--EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG
T ss_pred EEE--EECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc
Confidence 999 99999999999876 8999999999999999864
No 22
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.90 E-value=1.4e-23 Score=186.83 Aligned_cols=108 Identities=28% Similarity=0.449 Sum_probs=102.1
Q ss_pred CceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceE
Q 013755 39 EERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (437)
Q Consensus 39 ~~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~ 118 (437)
..+.++++|++|+++++|+| +.|..||.|+|||++++.||++|++| +.|+.|.+| ++|+||+++|.+|++|+++
T Consensus 110 ~gv~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~ 183 (219)
T 3oe2_A 110 PGVKELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKW 183 (219)
T ss_dssp TTCEECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEE
T ss_pred CCcEECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEE
Confidence 34567999999999999999 89999999999999999999999999 589999998 8999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEecee
Q 013755 119 VFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (437)
Q Consensus 119 ~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~ 154 (437)
+| +|||++|||..+.+ .|||+++++|+|+|+++.
T Consensus 184 ~v--~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 184 RL--VIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EE--EECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99 99999999999988 599999999999999875
No 23
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.90 E-value=4e-23 Score=171.16 Aligned_cols=114 Identities=39% Similarity=0.605 Sum_probs=102.0
Q ss_pred ceeecCCCeEE-EEEEcc-CC-CCCCCCCCEEEEEEEEEE-cCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCC
Q 013755 40 ERGLGNSGIKK-KLLKNG-VD-WDTPEFGDEVTIHYVGTL-LDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKR 115 (437)
Q Consensus 40 ~~~~~~~g~~~-~~~~~G-~g-~~~~~~gd~V~v~y~~~~-~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G 115 (437)
.+.++++|+.| +++++| +| +..|+.||.|+|||++++ .||++|++|+.++.|+.|.+|.+++++||+++|.+|++|
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~G 88 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKN 88 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTT
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCC
Confidence 34567777665 689976 44 389999999999999999 799999999987789999999999999999999999999
Q ss_pred ceEEEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEeceee
Q 013755 116 ECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWIT 155 (437)
Q Consensus 116 ~~~~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~~ 155 (437)
++++| .|||+++||..+.+ .||++++++|+|+|+++..
T Consensus 89 e~~~v--~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 89 EKCLV--RIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp CEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEE--EEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 99999 99999999999876 7999999999999998854
No 24
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.90 E-value=6.4e-24 Score=176.80 Aligned_cols=110 Identities=30% Similarity=0.522 Sum_probs=96.5
Q ss_pred eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEE
Q 013755 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (437)
Q Consensus 42 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~-~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~ 120 (437)
.++++||+|+++++|+| ..++.||.|+|||++++. +|++|++|+..+.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 22 v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v 100 (134)
T 3b7x_A 22 ISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARF 100 (134)
T ss_dssp SSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEE
T ss_pred eeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEE
Confidence 45899999999999999 889999999999999998 6999999998778999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCC-CCCCCCcEEEEEEEecee
Q 013755 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (437)
Q Consensus 121 ~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~ 154 (437)
+|||++|||..+.+ .||++++++|+|+|+++.
T Consensus 101 --~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 101 --LFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred --EECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 99999999999876 799999999999999874
No 25
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.89 E-value=4.9e-23 Score=183.99 Aligned_cols=113 Identities=40% Similarity=0.688 Sum_probs=106.2
Q ss_pred CCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCce
Q 013755 38 GEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (437)
Q Consensus 38 ~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~ 117 (437)
+..+.++++|++|+++++|+| ..|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+++++||+++|.+|++|++
T Consensus 96 g~t~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~ 174 (209)
T 3uf8_A 96 GSTVVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGV 174 (209)
T ss_dssp CCCCEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCE
T ss_pred cccccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCE
Confidence 334567999999999999999 8899999999999999999999999998889999999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEece
Q 013755 118 AVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (437)
Q Consensus 118 ~~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~ 153 (437)
++| .|||++|||..+.+ .||++++++|+|+|+++
T Consensus 175 ~~v--~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 175 RRL--TIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EEE--EECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 999 99999999999987 69999999999999864
No 26
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.89 E-value=3.8e-23 Score=184.31 Aligned_cols=111 Identities=31% Similarity=0.471 Sum_probs=104.5
Q ss_pred CceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceE
Q 013755 39 EERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (437)
Q Consensus 39 ~~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~ 118 (437)
..+.++++|++|+++++|+| +.|..||.|+|||++++.||++|++|+.++.|+.|.+| ++|+||+++|.+|++|+++
T Consensus 99 ~~v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~ 175 (213)
T 1fd9_A 99 PGVVVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTW 175 (213)
T ss_dssp TTEEECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEE
T ss_pred CCcEECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCEE
Confidence 34678999999999999999 99999999999999999999999999987789999995 9999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEecee
Q 013755 119 VFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (437)
Q Consensus 119 ~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~ 154 (437)
+| +|||+++||..+.+ .||++++++|+|+|+++.
T Consensus 176 ~v--~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~ 210 (213)
T 1fd9_A 176 EI--YVPSGLAYGPRSVGGPIGPNETLIFKIHLISVK 210 (213)
T ss_dssp EE--EECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEE
T ss_pred EE--EECchhccCccCCCCCCCCCCeEEEEEEEEEEE
Confidence 99 99999999999875 899999999999999885
No 27
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.89 E-value=1.3e-23 Score=173.97 Aligned_cols=111 Identities=34% Similarity=0.565 Sum_probs=103.7
Q ss_pred ceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhcc------cc
Q 013755 40 ERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIIT------MK 113 (437)
Q Consensus 40 ~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~------m~ 113 (437)
+..++++|++|+++++|+| ..++.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+ |+
T Consensus 6 ~~~~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~ 84 (129)
T 1u79_A 6 EFSVSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPML 84 (129)
T ss_dssp CCEECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCB
T ss_pred ccEECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccC
Confidence 3467999999999999999 8999999999999999989999999987668999999999999999999998 99
Q ss_pred CCceEEEEEecCCCCCCCCCCC------CCCCCCCcEEEEEEEece
Q 013755 114 KRECAVFTFTLPSELRFGVEGR------DSLPPNSVVQFEVELVSW 153 (437)
Q Consensus 114 ~G~~~~~~~~ip~~~ayg~~~~------~~i~~~~~~~f~v~l~~~ 153 (437)
+|++++| .|||+++||..+. +.||++++++|+|+|+++
T Consensus 85 ~Ge~~~v--~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 85 TGGKRTL--RIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TTCEEEE--EECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCCEEEE--EEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999 9999999999885 379999999999999875
No 28
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.89 E-value=1.2e-22 Score=172.53 Aligned_cols=109 Identities=30% Similarity=0.469 Sum_probs=100.9
Q ss_pred eecCCCe-EEEEEEccCCCC--CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceE
Q 013755 42 GLGNSGI-KKKLLKNGVDWD--TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (437)
Q Consensus 42 ~~~~~g~-~~~~~~~G~g~~--~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~ 118 (437)
.++++|+ +|+++++|+| . .|+.||.|+|||++++.||++|+++ .|+.|.+|.+++|+||+++|.+|++|+++
T Consensus 38 ~~~~sG~v~~~vl~~G~G-~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~ 112 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPP-GSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 112 (157)
T ss_dssp ESSSSSSEEEEEEECCST-TSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEE
T ss_pred eECCCCCEEEEEEEccCC-CccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEE
Confidence 4788897 8999999999 5 8999999999999999999999984 78999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCC-CC-CCCCCCcEEEEEEEeceeeee
Q 013755 119 VFTFTLPSELRFGVEG-RD-SLPPNSVVQFEVELVSWITVV 157 (437)
Q Consensus 119 ~~~~~ip~~~ayg~~~-~~-~i~~~~~~~f~v~l~~~~~~~ 157 (437)
+| +|||+++||..+ .+ .||++++++|+|+|+++...+
T Consensus 113 ~v--~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 113 MV--TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EE--EECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred EE--EECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccc
Confidence 99 999999999998 55 799999999999999986543
No 29
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.89 E-value=7.3e-23 Score=183.74 Aligned_cols=110 Identities=33% Similarity=0.636 Sum_probs=103.8
Q ss_pred CceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceE
Q 013755 39 EERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (437)
Q Consensus 39 ~~~~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~ 118 (437)
+.+.++++|++|+++++|+| ..|..||.|+|||++++.||++|++|+.++.|+.|.+| ++|+||+++|.+|++|+++
T Consensus 114 ~~v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~ 190 (224)
T 1q6h_A 114 KGVKTSSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKI 190 (224)
T ss_dssp TTEEECTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEE
T ss_pred CCeEECCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCEE
Confidence 44567899999999999999 89999999999999999999999999988899999995 9999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCcEEEEEEEece
Q 013755 119 VFTFTLPSELRFGVEGRDSLPPNSVVQFEVELVSW 153 (437)
Q Consensus 119 ~~~~~ip~~~ayg~~~~~~i~~~~~~~f~v~l~~~ 153 (437)
+| +|||+++||..+.+.||++++++|+|+|+++
T Consensus 191 ~v--~IP~~laYG~~g~~~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 191 KL--VIPPELAYGKAGVPGIPPNSTLVFDVELLDV 223 (224)
T ss_dssp EE--EECGGGTTTTTCBTTBCTTCCEEEEEEEEEE
T ss_pred EE--EECchhhcCcCCCCCCCCCCEEEEEEEEEEe
Confidence 99 9999999999998789999999999999876
No 30
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.88 E-value=2.6e-22 Score=163.50 Aligned_cols=108 Identities=31% Similarity=0.455 Sum_probs=99.2
Q ss_pred eeecCCC-eEEEEEEccCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceE
Q 013755 41 RGLGNSG-IKKKLLKNGVDW-DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECA 118 (437)
Q Consensus 41 ~~~~~~g-~~~~~~~~G~g~-~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~ 118 (437)
..++++| ++|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|+++
T Consensus 7 ~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 82 (118)
T 2awg_A 7 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 82 (118)
T ss_dssp EESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEE
T ss_pred eEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEE
Confidence 3567777 999999999992 28999999999999999899999984 78999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCC-CCCCCCcEEEEEEEecee
Q 013755 119 VFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (437)
Q Consensus 119 ~~~~~ip~~~ayg~~~~~-~i~~~~~~~f~v~l~~~~ 154 (437)
+| .|||+++||..+.+ .||++++++|+|+|+++.
T Consensus 83 ~~--~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 83 MV--TADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EE--EEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 99 99999999999876 899999999999998874
No 31
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=4.7e-22 Score=165.71 Aligned_cols=110 Identities=30% Similarity=0.447 Sum_probs=100.8
Q ss_pred eeecCCC-eEEEEEEccCCCC--CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCce
Q 013755 41 RGLGNSG-IKKKLLKNGVDWD--TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (437)
Q Consensus 41 ~~~~~~g-~~~~~~~~G~g~~--~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~ 117 (437)
..++++| ++|+++++|+| . .|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++
T Consensus 11 ~~~~~~g~l~~~vl~~G~G-~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~ 85 (135)
T 2d9f_A 11 LDILGNGLLRKKTLVPGPP-GSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGET 85 (135)
T ss_dssp EESSSSSSSEEEEEECCCS-SCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCE
T ss_pred cEECCCCCEEEEEEEcCCC-CCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCE
Confidence 3567777 99999999999 5 8999999999999999999999983 7899999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCC-CC-CCCCCCcEEEEEEEeceeeee
Q 013755 118 AVFTFTLPSELRFGVEG-RD-SLPPNSVVQFEVELVSWITVV 157 (437)
Q Consensus 118 ~~~~~~ip~~~ayg~~~-~~-~i~~~~~~~f~v~l~~~~~~~ 157 (437)
++| .|||+++||..+ .+ .||++++++|+|+|+++....
T Consensus 86 ~~v--~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 86 AMV--TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRP 125 (135)
T ss_dssp EEE--EECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSC
T ss_pred EEE--EEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCC
Confidence 999 999999999998 54 899999999999999986543
No 32
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.84 E-value=2.3e-20 Score=157.18 Aligned_cols=116 Identities=34% Similarity=0.538 Sum_probs=102.4
Q ss_pred eeccC--CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCC
Q 013755 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (437)
Q Consensus 156 ~~d~~--~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~ 233 (437)
..|++ .|++++++++++|.|...|..++.|+|+|.. ++.||++||++ +.+
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g---------------------------~~~dG~~fdss-~~~ 77 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKG---------------------------KLSNGKKFDSS-HDR 77 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEE---------------------------ECTTSCEEEES-GGG
T ss_pred cccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEE---------------------------EECCCCEEEee-ccc
Confidence 45566 7899999999999998889999998886544 44567778877 777
Q ss_pred CCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeec
Q 013755 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (437)
Q Consensus 234 ~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~ 302 (437)
+.|+.|.+|.+.+++||+.+|.+|++||++.|.|||.++||..+.+. .||++++|+|+|+|+++..
T Consensus 78 ~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~~~---~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 78 NEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP---KIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp TSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEEC
T ss_pred CCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCCCC---CcCCCCeEEEEEEEEEecC
Confidence 89999999999999999999999999999999999999999998864 7999999999999999863
No 33
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.84 E-value=6.7e-21 Score=151.10 Aligned_cols=94 Identities=39% Similarity=0.667 Sum_probs=89.2
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCC-CC
Q 013755 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRD-SL 138 (437)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~-~i 138 (437)
+.++.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++| .|||+++||..+.+ .|
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v--~ip~~~ayG~~~~~~~I 81 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKL--VIPSELGYGERGAPPKI 81 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEE--EECGGGTTTTTCBTTTB
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEE--EECHHHCcCCCCCCCCc
Confidence 7899999999999999889999999998778999999999999999999999999999999 99999999999876 79
Q ss_pred CCCCcEEEEEEEeceee
Q 013755 139 PPNSVVQFEVELVSWIT 155 (437)
Q Consensus 139 ~~~~~~~f~v~l~~~~~ 155 (437)
|++++++|+|+|.++..
T Consensus 82 p~~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 82 PGGATLVFEVELLKIER 98 (102)
T ss_dssp CTTCCEEEEEEEEEEGG
T ss_pred CcCCeEEEEEEEEEecc
Confidence 99999999999998864
No 34
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.83 E-value=8e-20 Score=159.36 Aligned_cols=127 Identities=28% Similarity=0.501 Sum_probs=98.3
Q ss_pred CccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEec-CccEEeecCCCCCCCeEEE
Q 013755 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYDGEQPLEFI 240 (437)
Q Consensus 162 dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~-~g~~fd~~~~~~~~p~~f~ 240 (437)
+.++.++++++|.|. .|..++.|+++|..+ +. +|++|+++ |.++.|+.|.
T Consensus 48 ~~gl~~~vl~~G~G~-~~~~Gd~V~v~Y~g~---------------------------l~~dG~~fdss-~~~~~p~~f~ 98 (180)
T 2f4e_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAW---------------------------TKNSQHKFEDT-WHEQQPIELV 98 (180)
T ss_dssp ETTEEEEEEECCBSC-CBCTTCEEEEEEEEE---------------------------ETTTCCEEEET-TTTTCCEEEE
T ss_pred CCceEEEEEeCCCCC-CCCCCCEEEEEEEEE---------------------------ECCCCcEEecc-CccCCCEEEE
Confidence 456899999999996 788888888866554 43 47788888 7788999999
Q ss_pred cCCC-CcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeecccC---CCCCChHHHHH
Q 013755 241 TDEE-QVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKV---PWEMNNQGKIE 316 (437)
Q Consensus 241 lg~~-~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~~~---~~~~~~~~~~~ 316 (437)
+|.+ .+++||+.+|.+|++||++.|.||++++||..+.+. ...||++++|+|+|+|+++....+ .|+|+.++++.
T Consensus 99 lG~g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~ 177 (180)
T 2f4e_A 99 LGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIG 177 (180)
T ss_dssp TTSCCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC-------------
T ss_pred eCCCCchhHHHHHHHhCCCCCCEEEEEECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHh
Confidence 9999 999999999999999999999999999999888631 126999999999999999998887 89999999987
Q ss_pred HH
Q 013755 317 AA 318 (437)
Q Consensus 317 ~~ 318 (437)
.+
T Consensus 178 ~A 179 (180)
T 2f4e_A 178 AA 179 (180)
T ss_dssp --
T ss_pred hc
Confidence 65
No 35
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.83 E-value=7.1e-20 Score=151.17 Aligned_cols=115 Identities=34% Similarity=0.552 Sum_probs=100.9
Q ss_pred eccC--CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCC
Q 013755 157 VDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (437)
Q Consensus 157 ~d~~--~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~ 234 (437)
+|+. .|+++.++++++|.|...|..++.|+++|.. ++.||++||++ +.++
T Consensus 11 ~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g---------------------------~~~dG~~fdss-~~~~ 62 (128)
T 3o5q_A 11 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKG---------------------------KLSNGKKFDSS-HDRN 62 (128)
T ss_dssp EECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEE---------------------------EETTSCEEEEH-HHHT
T ss_pred ceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEE---------------------------EECCCCEEEec-CCCC
Confidence 3444 7899999999999998789999998886554 44567778877 6678
Q ss_pred CCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeec
Q 013755 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (437)
Q Consensus 235 ~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~ 302 (437)
.|+.|.+|.+++++||+.+|.+|++||++.|.|||.++||..+... .||++++|+|+|+|+++..
T Consensus 63 ~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~---~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 63 EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLP---KIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEEC
T ss_pred CCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCC---CcCCCCEEEEEEEEEEecC
Confidence 8999999999999999999999999999999999999999998764 7999999999999999864
No 36
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.82 E-value=2.9e-19 Score=145.83 Aligned_cols=110 Identities=35% Similarity=0.504 Sum_probs=94.3
Q ss_pred CccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCC-------CC
Q 013755 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYD-------GE 234 (437)
Q Consensus 162 dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~-------~~ 234 (437)
+.++.++++++|+|...|..++.|+++|..++ .||++||++ +. .+
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~---------------------------~dG~~fdss-~~~~~~~~~~~ 54 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTL---------------------------PDGTVFDTN-IQTSSKKKKNA 54 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEEC---------------------------TTSCEEEEC-CCCSSSTTTTC
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEE---------------------------CCCCEEEec-cccccccccCC
Confidence 45789999999999888999999998766554 455666666 43 25
Q ss_pred CCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeee
Q 013755 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (437)
Q Consensus 235 ~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~ 301 (437)
.|+.|.+|.+.+++||+.+|.+|++||++.|.||++++||+.+.+. ..||++++|+|+|+|++++
T Consensus 55 ~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 55 KPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp CCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEeC
Confidence 8999999999999999999999999999999999999999988753 2599999999999999874
No 37
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.81 E-value=2e-19 Score=148.45 Aligned_cols=107 Identities=30% Similarity=0.485 Sum_probs=101.5
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
.+.++.++++|+.+|+.|+|++|+..|++|+++.|.+ ..+|+++|.||.++|++++|+.+|+++|
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al 74 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN---------------AILYSNRAACLTKLMEFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHhhHHHhhccHHHHHHHHHHHH
Confidence 3568899999999999999999999999999998875 3779999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+++|+++.+|+++|.+|..+|++++|+.+|+++++++|+|++
T Consensus 75 ~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~ 116 (126)
T 4gco_A 75 RLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEE 116 (126)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHH
Confidence 999999999999999999999999999999999999999864
No 38
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.81 E-value=2.8e-19 Score=148.82 Aligned_cols=117 Identities=36% Similarity=0.559 Sum_probs=101.6
Q ss_pred eeccC--CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCC
Q 013755 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (437)
Q Consensus 156 ~~d~~--~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~ 233 (437)
+.|++ .++++.++++++|.|...|..++.|+++|.. ++.||++||++ +.+
T Consensus 5 ~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g---------------------------~~~dG~~fdss-~~~ 56 (135)
T 1r9h_A 5 KIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVG---------------------------TLENGTKFDSS-RDR 56 (135)
T ss_dssp CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEE---------------------------EETTSCEEEEH-HHH
T ss_pred ceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEE---------------------------EECCCCEEEec-CcC
Confidence 44666 7899999999999998778889988886654 44567778877 555
Q ss_pred CCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeecc
Q 013755 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKE 303 (437)
Q Consensus 234 ~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~ 303 (437)
+.|+.|.+|.+.+++||+.+|.+|++||++.|.|||+++||+.+.+. .||++++++|+|+|+++...
T Consensus 57 ~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~---~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 57 GDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPP---KIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp TSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEEC-
T ss_pred CCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCC---CcCcCCcEEEEEEEEEeecC
Confidence 78999999999999999999999999999999999999999988764 69999999999999999764
No 39
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.80 E-value=9.4e-19 Score=144.76 Aligned_cols=117 Identities=35% Similarity=0.663 Sum_probs=99.7
Q ss_pred eeccCCCccceEEEEecc-cc-CCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCC
Q 013755 156 VVDLSKDGGIVKKILEKG-ER-DASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (437)
Q Consensus 156 ~~d~~~dg~v~k~i~~~G-~g-~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~ 233 (437)
..+++.+|.++++++++| .| ...|..++.|+++|..++. .||++||++ +.+
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~--------------------------~dG~~fd~s-~~~ 61 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLE--------------------------STGKVFDSS-FDR 61 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEET--------------------------TTCCEEEEG-GGT
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEEC--------------------------CCCeEEEec-CCC
Confidence 446678899999999987 55 4678888888886655430 467778887 667
Q ss_pred CCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeec
Q 013755 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (437)
Q Consensus 234 ~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~ 302 (437)
+.|+.|.+|.+.+++||+.+|.+|++||++.|.|||+++||..+.+. .||++++++|+|+|+++.+
T Consensus 62 ~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~---~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 62 NVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGE---SIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TCCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEEC
T ss_pred CccEEEEeCCCCcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCCCCC---CcCCCCeEEEEEEEEEEec
Confidence 78999999999999999999999999999999999999999988764 6999999999999999875
No 40
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.80 E-value=1.7e-19 Score=153.39 Aligned_cols=117 Identities=18% Similarity=0.248 Sum_probs=91.7
Q ss_pred CCccceEEEEeccccCCCC-CCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEec--CccEEeecCCCCCCCe
Q 013755 161 KDGGIVKKILEKGERDASP-GDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE--DGTVFEKKGYDGEQPL 237 (437)
Q Consensus 161 ~dg~v~k~i~~~G~g~~~p-~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~--~g~~fd~~~~~~~~p~ 237 (437)
.+.++.|+|+++|.|..++ ..++.|++|| +|++. ||++|||| ++++.|+
T Consensus 8 ~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY---------------------------~g~l~d~~G~~FDsS-~~rg~P~ 59 (165)
T 2lkn_A 8 REDGIQKRVIQEGRGELPDFQDGTKATFHY---------------------------RTLHSDDEGTVLDDS-RARGKPM 59 (165)
T ss_dssp HTTSCCCCEEECCSSCCCCCCTTCEEEEEC---------------------------EEECSSSSCCEEEES-TTTTCCE
T ss_pred cCCCeEEEEEECCcCCCCCCCCCCEEEEEE---------------------------EEEEeCCCccEEEec-ccCCCCE
Confidence 4567999999999996543 5678877755 55553 48999999 8999999
Q ss_pred EEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc--------ccc----cc----------------------c
Q 013755 238 EFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE--------AKR----DL----------------------A 283 (437)
Q Consensus 238 ~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~--------~~~----~~----------------------~ 283 (437)
+|.+|.+++|+||+.+|.+|++||++.|+|||+++||... ... .. .
T Consensus 60 ~f~lG~g~vI~Gwd~gl~~M~~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~ 139 (165)
T 2lkn_A 60 ELIIGKKFKLPVWETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDA 139 (165)
T ss_dssp EEESSSSCSCSHHHHHHTTCCTTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTH
T ss_pred EEEecCCCccHHHHHHHhcCccCceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeecccccccccccccc
Confidence 9999999999999999999999999999999999999310 000 00 0
Q ss_pred cCCCCceEEEEEEEeeeecccC
Q 013755 284 TIPSCAKLYYEVEMMDFIKEKV 305 (437)
Q Consensus 284 ~ip~~~~l~~~vel~~~~~~~~ 305 (437)
.++++++|+|+|||++++...+
T Consensus 140 li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 140 LQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp HHHSCCCCEEEEEEEEEECTTT
T ss_pred ccCCCCCeEEEEEEEEEcCCcc
Confidence 1233467999999999987654
No 41
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.80 E-value=1.3e-18 Score=140.55 Aligned_cols=109 Identities=26% Similarity=0.383 Sum_probs=94.7
Q ss_pred CccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEc
Q 013755 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFIT 241 (437)
Q Consensus 162 dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~l 241 (437)
+.++.++++++|.|...|..++.|+++|.. ++.||++||++ +.++.|+.|.+
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~---------------------------~~~dG~~~d~s-~~~~~p~~f~l 56 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTG---------------------------TLENGQKFDSS-VDRGSPFQCNI 56 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEE---------------------------EETTSCEEEES-TTTTCCEEEET
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEE---------------------------EECCCCEEEec-CCCCCcEEEEe
Confidence 346899999999997668888988886654 44567778887 67678999999
Q ss_pred CCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeee
Q 013755 242 DEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (437)
Q Consensus 242 g~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~ 301 (437)
|.+.+++||+.+|.+|++||++.|.+|+.++||..+.+. .||++++++|+|+|+++.
T Consensus 57 G~~~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~---~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 57 GVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPG---LIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp TSSSSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEC
T ss_pred CCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCC---CcCCCCeEEEEEEEEEeC
Confidence 999999999999999999999999999999999988764 699999999999999863
No 42
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.79 E-value=8.9e-19 Score=140.12 Aligned_cols=107 Identities=28% Similarity=0.524 Sum_probs=92.6
Q ss_pred cceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEcCC
Q 013755 164 GIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDE 243 (437)
Q Consensus 164 ~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~ 243 (437)
++.++++++|+|...|..++.|+++|..+ +.||++|+++ +.++.|+.|.+|.
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~---------------------------~~dG~~~d~s-~~~~~p~~f~lG~ 52 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGM---------------------------LEDGKKFDSS-RDRNKPFKFMLGK 52 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEE---------------------------ETTSCEEEEH-HHHTSCEEEETTS
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEE---------------------------ECCCCEEEec-CCCCCCEEEEeCC
Confidence 46789999999976688999988866554 4466777777 5556899999999
Q ss_pred CCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeee
Q 013755 244 EQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (437)
Q Consensus 244 ~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~ 301 (437)
+.+++||+.+|.+|++||++.|.+||+++||+.+.+. .||++++++|+|+|++++
T Consensus 53 ~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~---~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 53 QEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPG---IIPPHATLVFDVELLKLE 107 (107)
T ss_dssp CCSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEC
T ss_pred CChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCCCC---CcCCCCeEEEEEEEEEeC
Confidence 9999999999999999999999999999999988764 699999999999999863
No 43
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.79 E-value=2e-19 Score=153.71 Aligned_cols=125 Identities=22% Similarity=0.375 Sum_probs=97.3
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCCCC
Q 013755 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (437)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i~~ 140 (437)
.+++||.|+|||++++.||++|++|+..+.|+.|.+|.+++|+||+++|.+|++|++++| .|||++|||+++..
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v--~Ipp~~AYG~~~~~---- 97 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTF--SLEPDAAFGVPSPD---- 97 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEE--EECGGGTTCCCCGG----
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEE--EEChHHhcCCCChH----
Confidence 689999999999999999999999998778999999999999999999999999999999 99999999998643
Q ss_pred CCcEEEEEEEeceeee--------ecc-CCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeec
Q 013755 141 NSVVQFEVELVSWITV--------VDL-SKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (437)
Q Consensus 141 ~~~~~f~v~l~~~~~~--------~d~-~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~ 201 (437)
++..+....+... ... ..+|..+.-++.+- .++.|++|+||+|++.++.|+
T Consensus 98 ---lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v-------~~~~V~vD~NHPLAGk~L~F~ 157 (169)
T 4dt4_A 98 ---LIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREI-------NGDSITVDFNHPLAGQTVHFD 157 (169)
T ss_dssp ---GEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEE-------ETTEEEEECSCTTTTCCEEEE
T ss_pred ---HEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEE-------cCCEEEEeCCCccCCCEEEEE
Confidence 3444443332211 111 13343332222222 357999999999999998874
No 44
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.78 E-value=5.5e-19 Score=146.87 Aligned_cols=115 Identities=25% Similarity=0.472 Sum_probs=91.4
Q ss_pred eeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCC
Q 013755 156 VVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQ 235 (437)
Q Consensus 156 ~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~ 235 (437)
+.+++.++++.++++++|.|.. +..++.|+++|..++.+ +|++||++ +.++.
T Consensus 19 ~~~v~~~~gl~~~vl~~G~g~~-~~~gd~V~v~Y~g~l~~--------------------------~G~~fdss-~~~~~ 70 (134)
T 3b7x_A 19 MLDISGDRGVLKDVIREGAGDL-VAPDASVLVKYSGYLEH--------------------------MDRPFDSN-YFRKT 70 (134)
T ss_dssp CEESSSSSSEEEEEEECCEEEE-CCTTCEEEEEEEEECTT--------------------------CSSCSEEC------
T ss_pred cceeeCCCCEEEEEEEcCCCCC-CCCCCEEEEEEEEEECC--------------------------CCeEEEec-CCCCC
Confidence 4577889999999999999863 55678888766554431 46677777 66678
Q ss_pred CeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeee
Q 013755 236 PLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (437)
Q Consensus 236 p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~ 301 (437)
|+.|.+|.+.+++||+.+|.+|++||++.|.|||+++||..+.+. .||++++|+|+|+|+++.
T Consensus 71 p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~---~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 71 PRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPP---LIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp --CEEC-CCCCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEC
T ss_pred CEEEEcCCcchhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCC---CcCcCCeEEEEEEEEEEe
Confidence 999999999999999999999999999999999999999988765 699999999999999875
No 45
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=1.4e-18 Score=147.30 Aligned_cols=124 Identities=16% Similarity=0.142 Sum_probs=107.2
Q ss_pred ChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHH
Q 013755 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIEL 389 (437)
Q Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~ 389 (437)
.+-.....+..+++.|+.+|+.|+|++|+..|++||++.|..+... ..........+|+|+|.|+.++|+|++|+.+
T Consensus 3 ~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~ 79 (159)
T 2hr2_A 3 KPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALHS 79 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHHH
Confidence 3444567889999999999999999999999999999999854321 0001122345899999999999999999999
Q ss_pred HHHHHHh-------CCCCHHHH----HHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 390 CSKVLDC-------DCHNVKAL----YRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 390 ~~~al~~-------~p~~~~a~----~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
|++||++ +|++.++| |++|.++..+|++++|+.+|++|++++|+++.
T Consensus 80 ~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~ 137 (159)
T 2hr2_A 80 ADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG 137 (159)
T ss_dssp HHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH
Confidence 9999999 99999999 99999999999999999999999999999875
No 46
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.78 E-value=2.1e-18 Score=145.80 Aligned_cols=124 Identities=22% Similarity=0.344 Sum_probs=97.3
Q ss_pred CCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCC
Q 013755 60 DTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSL 138 (437)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~-~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i 138 (437)
+.++.||.|+|||++++. +|++|++|+.. .|+.|.+|.+++++||+++|.+|++|++++| .|||++|||.++.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v--~ipp~~aYG~~~~--- 78 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEV--VIAPEEAYGVYES--- 78 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEE--EECGGGTTCSSCS---
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEE--EEecHHHcCCCCc---
Confidence 578999999999999998 99999999874 8999999999999999999999999999999 9999999998764
Q ss_pred CCCCcEEEEEEEeceeeeecc---------CCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeec
Q 013755 139 PPNSVVQFEVELVSWITVVDL---------SKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (437)
Q Consensus 139 ~~~~~~~f~v~l~~~~~~~d~---------~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~ 201 (437)
.+++.+....+ ....+ ..+|....-++.+- .++.|++|+||++++.++.|+
T Consensus 79 ----~~v~~v~~~~f-~~~~~~~G~~~~~~~~~G~~~~~~V~~v-------~~~~v~vD~NHPLAG~~L~F~ 138 (151)
T 2kr7_A 79 ----SYLQEVPRDQF-EGIELEKGMSVFGQTEDNQTIQAIIKDF-------SATHVMVDYNHPLAGKTLAFR 138 (151)
T ss_dssp ----CEEEEEEGGGG-TTSCCCTTCEEEEEETTTEEEEEEEEEE-------CSSEEEEEECCTTSCCCEEEE
T ss_pred ----ceEEEEcHHHc-CCCCCccCCEEEEECCCCCEEEEEEEEE-------CCCEEEEECCCcCCCCEEEEE
Confidence 35566655444 11111 12332222222222 458999999999999998885
No 47
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.78 E-value=1.9e-17 Score=147.81 Aligned_cols=198 Identities=20% Similarity=0.223 Sum_probs=127.8
Q ss_pred ccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhc---cccCCceEEEEEecCCCCCCC
Q 013755 55 NGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGII---TMKKRECAVFTFTLPSELRFG 131 (437)
Q Consensus 55 ~G~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~---~m~~G~~~~~~~~ip~~~ayg 131 (437)
.|+-.+.|..++.+.|... . +|.. ..|.+....-+.-+-++.. ++... +.+| .+-...-..
T Consensus 9 ~~~~~~~~~~~~~i~ikv~--~-~~~~----------v~~~i~~~~~l~kl~~~y~~~~g~~~~-~~~f--~fdG~~i~~ 72 (209)
T 3uf8_A 9 SGEVKPEVKPETHINLKVS--D-GSSE----------IFFKIKKTTPLRRLMEAFAKRQGKEMD-SLRF--LYDGIRIQA 72 (209)
T ss_dssp ---------CCSEEEEEEE--C-SSCE----------EEEEEETTSCTHHHHHHHHHHHTCCGG-GCEE--EETTEECCT
T ss_pred CCcccceeCCCCcEEEEEE--c-CCCE----------EEEEEeeCCHHHHHHHHHHHhhCCChh-eEEE--EECCEeccC
Confidence 3443456777777776653 2 3332 3455544443333333332 33333 3344 444333333
Q ss_pred CCCCCCCCCCCcEEEEEEEeceeeeeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEE
Q 013755 132 VEGRDSLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYL 211 (437)
Q Consensus 132 ~~~~~~i~~~~~~~f~v~l~~~~~~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~ 211 (437)
...+..+.....-..++-+....-....+.+.++.++++++|.|. .|..++.|+++|.
T Consensus 73 ~~Tpk~L~~ed~d~I~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G~-~~~~gd~V~v~Y~--------------------- 130 (209)
T 3uf8_A 73 DQTPEDLDMEDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGA-EARAGQTVSVHYT--------------------- 130 (209)
T ss_dssp TCCTTTTTCCTTEEEEEECSCTTCCCCEECTTSCEEEEEECCCSC-BCCTTCEEEEEEE---------------------
T ss_pred CCChHHhhhcccccchhhccccccccccCCCCceEEEEEEcCCCC-cCCCCCEEEEEEE---------------------
Confidence 333332322233333443333322234456778999999999985 4888888887554
Q ss_pred EEEEEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceE
Q 013755 212 KDVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKL 291 (437)
Q Consensus 212 ~~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l 291 (437)
+++.||++||++ +.++.|+.|.+|.+.+++||+.+|.+|++||++.|.|||.++||+.+... .||++++|
T Consensus 131 ------g~l~dG~~fdss-~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~~~---~IP~~s~L 200 (209)
T 3uf8_A 131 ------GWLTDGQKFDSS-KDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAG---VIPPNATL 200 (209)
T ss_dssp ------EEETTSCEEEES-GGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCBTT---TBCTTCCE
T ss_pred ------EEECCCCEEEEc-cccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCCCC---CcCCCCeE
Confidence 455577788887 77789999999999999999999999999999999999999999998765 69999999
Q ss_pred EEEEEEeee
Q 013755 292 YYEVEMMDF 300 (437)
Q Consensus 292 ~~~vel~~~ 300 (437)
+|+|+|+++
T Consensus 201 vF~VeL~~I 209 (209)
T 3uf8_A 201 VFEVELLDV 209 (209)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEC
Confidence 999999874
No 48
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.77 E-value=3.9e-18 Score=138.70 Aligned_cols=112 Identities=29% Similarity=0.363 Sum_probs=96.8
Q ss_pred eeeccCCCccceEEEEeccccC-CCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCC
Q 013755 155 TVVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (437)
Q Consensus 155 ~~~d~~~dg~v~k~i~~~G~g~-~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~ 233 (437)
.+.+++++|.+.++++++|.|. ..|..++.|+++|..++ .||++|+++
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~---------------------------~dG~~~ds~---- 53 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSL---------------------------ENGTRVQEE---- 53 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEEC---------------------------TTSCEEEEE----
T ss_pred cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEE---------------------------CCCCEEECC----
Confidence 3567889999999999999985 47888999888766554 355666653
Q ss_pred CCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeee
Q 013755 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (437)
Q Consensus 234 ~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~ 301 (437)
.|+.|.+|.+.+++||+.+|.+|++||++.|.+|++++||..+.+. .||++++++|+|+|+++.
T Consensus 54 -~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~---~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 54 -PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSP---YIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp -EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEE
T ss_pred -CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCCCC---ccCCCCeEEEEEEEEEec
Confidence 6999999999999999999999999999999999999999988764 699999999999999875
No 49
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.77 E-value=3.6e-18 Score=146.57 Aligned_cols=120 Identities=23% Similarity=0.358 Sum_probs=100.2
Q ss_pred CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEE
Q 013755 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (437)
Q Consensus 161 ~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~ 240 (437)
.+.++.++++++|.|...|..++.|+|+|. +++.||++||++ +.++.|+.|.
T Consensus 35 ~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~---------------------------g~l~dG~~fdss-~~~g~p~~f~ 86 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKRAPAIDDKCEVHYT---------------------------GRLRDGTVFDSS-RERGKPTTFR 86 (167)
T ss_dssp CTTSCEEEEEECCCCSBCCCTTCCEEEEEE---------------------------EECTTSCEEEEH-HHHTSCEEEC
T ss_pred CCCCEEEEEEEcCCCCcCCCCCCEEEEEEE---------------------------EEECCCCEEeec-cccCCCEEEE
Confidence 456789999999999766888888887554 455567788887 6667899999
Q ss_pred cCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeecccCCCCCChHHHH
Q 013755 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKI 315 (437)
Q Consensus 241 lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~~~~~~~~ 315 (437)
+ +.+++||+.+|.+|++||++.|.|||+++||..+.+. .|||+++|+|+|+|+++.+. .|.++.++..
T Consensus 87 l--g~vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~~~---~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~~ 154 (167)
T 1jvw_A 87 P--NEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGG---MIPPYSPLEFDVELISIKDG--GKGRTAEEVD 154 (167)
T ss_dssp G--GGSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCSSS---SSCTTCCEEEEEEEEEEGGG--CCSCBHHHHH
T ss_pred e--CchhHHHHHHHcCCCCCCEEEEEECchhhCCCCCCCC---CcCCCCeEEEEEEEEEEEcC--CCCCCHHHHH
Confidence 9 4899999999999999999999999999999988764 69999999999999999854 4556665543
No 50
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.77 E-value=4.3e-18 Score=140.52 Aligned_cols=104 Identities=31% Similarity=0.458 Sum_probs=90.4
Q ss_pred eEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEEcCCCC
Q 013755 166 VKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQ 245 (437)
Q Consensus 166 ~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~ 245 (437)
.|+++++|.|...|..+|.|+++|..+ +.||++||++ +.++.|+.|.+|.+.
T Consensus 27 ~K~~l~~G~G~~~~~~gd~V~v~Y~g~---------------------------~~dG~~fdss-~~~~~p~~f~lG~g~ 78 (130)
T 2lgo_A 27 EKKVLTPGDGVTKPQAGKKVTVHYDGR---------------------------FPDGKQFDSS-RSRGKPFQFTLGAGE 78 (130)
T ss_dssp CEEEEECCCSSCCCCTTSEEEEEEEEE---------------------------CTTSCEEECT-TTTTCCEEEETTSTT
T ss_pred EEEEEeccCCCccCCCCCEEEEEEEEE---------------------------ECCCCEEEcc-CcCCCCEEEEeCCCC
Confidence 345999999986688999988866554 4466778877 677789999999999
Q ss_pred cchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeee
Q 013755 246 VIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (437)
Q Consensus 246 ~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~ 300 (437)
+++||+.+|.+|++||++.|.|||.++||+.+.+. .||++++++|+|+|+++
T Consensus 79 vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~---~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 79 VIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPP---VIPPKATLVFEVELLAV 130 (130)
T ss_dssp SCHHHHHHHHHSCTTEEEEEEECTTTSTTTTCCST---TSCSSCCEEEEEEEEEC
T ss_pred ccHHHHHHHhCCCCCCEEEEEECcHHHCCCCCCCC---CcCCCCeEEEEEEEEEC
Confidence 99999999999999999999999999999988764 69999999999999874
No 51
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.77 E-value=6.2e-18 Score=140.06 Aligned_cols=108 Identities=31% Similarity=0.443 Sum_probs=94.0
Q ss_pred CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEE
Q 013755 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (437)
Q Consensus 161 ~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~ 240 (437)
.+.++.++++++|.| ..|..+|.|+++|.. ++.||++||++ ++++.|+.|.
T Consensus 26 ~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g---------------------------~~~dG~~fdss-~~~~~p~~f~ 76 (133)
T 2y78_A 26 TESGLKYEDLTEGSG-AEARAGQTVSVHYTG---------------------------WLTDGQKFDSS-KDRNDPFAFV 76 (133)
T ss_dssp CTTSCEEEEEECCSS-CBCCTTSEEEEEEEE---------------------------EETTSCEEEET-TTTTCCEEEE
T ss_pred CCCCEEEEEEEcCCC-CCCCCCCEEEEEEEE---------------------------EECCCCEEecc-CcCCCCEEEE
Confidence 566789999999998 468888888886654 44567788887 7778899999
Q ss_pred cCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeee
Q 013755 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (437)
Q Consensus 241 lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~ 300 (437)
+|.+.+++||+.+|.+|++||++.|.||+.++||..+... .|||+++++|+|+|+++
T Consensus 77 lG~g~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~~~~---~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 77 LGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGG---VIPPNATLVFEVELLDV 133 (133)
T ss_dssp TTSSSSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEC
T ss_pred eCCCChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCCCCC---CCCCCCeEEEEEEEEEC
Confidence 9999999999999999999999999999999999988764 69999999999999874
No 52
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.77 E-value=3.8e-18 Score=146.58 Aligned_cols=125 Identities=26% Similarity=0.326 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccC---CCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHH
Q 013755 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED---GSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAI 387 (437)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~---~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai 387 (437)
.+++++.+..++..|+.+|+.|+|++|+..|.+|+.+.+.. ....++++.........+|+|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 35677899999999999999999999999999999985432 122345566667788899999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 388 ELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 388 ~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+|+++|+++|+++++|+++|.+|..+|+|++|+.+|+++++++|+|+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 999999999999999999999999999999999999999999999885
No 53
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.76 E-value=5.9e-18 Score=143.54 Aligned_cols=114 Identities=29% Similarity=0.357 Sum_probs=96.9
Q ss_pred eeccCCCccceEEEEeccccC-CCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCC
Q 013755 156 VVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (437)
Q Consensus 156 ~~d~~~dg~v~k~i~~~G~g~-~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~ 234 (437)
+.+.+++|.+.++++++|+|. ..|..+|.|+++|.. ++.||++||++
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g---------------------------~l~dG~~fds~----- 83 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQT---------------------------SLENGTRVQEE----- 83 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEE---------------------------ECTTSCEEEEE-----
T ss_pred cceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEE---------------------------EECCCCEeecC-----
Confidence 445678888889999999984 578888888876654 44466677764
Q ss_pred CCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc-cccccccCCCCceEEEEEEEeeeeccc
Q 013755 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE-AKRDLATIPSCAKLYYEVEMMDFIKEK 304 (437)
Q Consensus 235 ~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~-~~~~~~~ip~~~~l~~~vel~~~~~~~ 304 (437)
.|+.|.+|.+.+++||+.+|.+|++||++.|.||++++||..+ ... .||++++|+|+|+|+++....
T Consensus 84 ~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~---~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 84 PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP---YIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEEEEETTTTSSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCSSS---CCCTTCCEEEEEEEEEEEECS
T ss_pred CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEECchhcCCcccccCC---CcCCCCeEEEEEEEEEEEccc
Confidence 6999999999999999999999999999999999999999988 543 699999999999999997654
No 54
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.75 E-value=5.3e-19 Score=149.69 Aligned_cols=122 Identities=30% Similarity=0.419 Sum_probs=91.9
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCC-------------CCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCC
Q 013755 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDR-------------YDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSE 127 (437)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~G~~~~st~~~-------------~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~ 127 (437)
.+++||.|+|||++++ ||++|+||+.. +.|+.|.+|.+++|+||+++|.+|++|++++| .|||+
T Consensus 1 ~i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v--~Ipp~ 77 (157)
T 3pr9_A 1 MVEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREV--VLPPE 77 (157)
T ss_dssp CCCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEE--EECGG
T ss_pred CCCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEE--EECcH
Confidence 3689999999999999 99999999862 37999999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCCCCCCcEEEEEEEeceeeeeccC-CCccc------eEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeee
Q 013755 128 LRFGVEGRDSLPPNSVVQFEVELVSWITVVDLS-KDGGI------VKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVA 200 (437)
Q Consensus 128 ~ayg~~~~~~i~~~~~~~f~v~l~~~~~~~d~~-~dg~v------~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~ 200 (437)
+|||+++.. ++..+....+... ++. ..|.. .-+|+.- .++.|++|+||++++.++.|
T Consensus 78 ~aYG~~~~~-------~V~~v~~~~f~~~-~~~~~~G~~~~~~~~~~~V~~v--------~~~~V~vD~NHPLAG~~L~F 141 (157)
T 3pr9_A 78 KAFGKRDPS-------KIKLIPLSEFTKR-GIKPIKGLTITIDGIPGKIVSI--------NSGRVLVDFNHELAGKEVKY 141 (157)
T ss_dssp GTTCCCCGG-------GEEEEEHHHHHHT-TCCCCTTCEEEETTEEEEEEEE--------ETTEEEEECSCTTTTCCEEE
T ss_pred HhcCCCChH-------hEEEcCHHHCCcc-cCCcCCCcEEEecCCCeEEEEE--------cCCEEEEECCCccCCCeEEE
Confidence 999998754 3333332222110 000 01111 1122211 35799999999999999888
Q ss_pred c
Q 013755 201 K 201 (437)
Q Consensus 201 ~ 201 (437)
+
T Consensus 142 ~ 142 (157)
T 3pr9_A 142 R 142 (157)
T ss_dssp E
T ss_pred E
Confidence 5
No 55
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=4.1e-18 Score=141.77 Aligned_cols=120 Identities=28% Similarity=0.305 Sum_probs=101.2
Q ss_pred eeccCCCccceEEEEeccccC-CCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCC
Q 013755 156 VVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (437)
Q Consensus 156 ~~d~~~dg~v~k~i~~~G~g~-~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~ 234 (437)
+.+++++|.+.++++++|.|. ..|..++.|+++|..+ +.||++|++.
T Consensus 10 ~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~---------------------------~~dG~~fds~----- 57 (135)
T 2d9f_A 10 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTS---------------------------LENGTRVQEE----- 57 (135)
T ss_dssp CEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEE---------------------------ESSSCEEEEE-----
T ss_pred CcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEE---------------------------ECCCCEEecC-----
Confidence 567788999999999999984 5788889888866554 4456666653
Q ss_pred CCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc-cccccccCCCCceEEEEEEEeeeecccCCCCCC
Q 013755 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE-AKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMN 310 (437)
Q Consensus 235 ~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~-~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~~~ 310 (437)
.|+.|.+|.+.+++||+.+|.+|++||++.|.+|++++||..+ ... .||++++++|+|+|+++....+...++
T Consensus 58 ~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~---~Ip~~~~l~f~vel~~v~~~~~~e~~s 131 (135)
T 2d9f_A 58 PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP---YIPPHAALCLEVTLKTAVDRPDLEMSG 131 (135)
T ss_dssp EEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCSSS---CCCTTCCEEEEEEEEEEESSCSSSSCC
T ss_pred CCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcCCC---ccCCCCeEEEEEEEEEeecCCchhhcC
Confidence 6999999999999999999999999999999999999999887 443 699999999999999998866554444
No 56
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.75 E-value=1.9e-17 Score=136.12 Aligned_cols=113 Identities=22% Similarity=0.327 Sum_probs=95.6
Q ss_pred cCCCccceEEEEecccc-CCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEec-CccEEeecCCC--CC
Q 013755 159 LSKDGGIVKKILEKGER-DASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYD--GE 234 (437)
Q Consensus 159 ~~~dg~v~k~i~~~G~g-~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~-~g~~fd~~~~~--~~ 234 (437)
...+.++.++++++|.+ ...|..++.|+++|.. ++. ||++||++ +. .+
T Consensus 8 ~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g---------------------------~~~~dG~~fdss-~~~~~~ 59 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEG---------------------------YLEKDGSLFHST-HKHNNG 59 (125)
T ss_dssp GCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEE---------------------------EETTTCCEEEEH-HHHTTT
T ss_pred EECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEE---------------------------EECCCCcEEEEc-ccCCCC
Confidence 44667889999999983 3578888888876555 444 66777776 53 46
Q ss_pred CCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeecc
Q 013755 235 QPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKE 303 (437)
Q Consensus 235 ~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~ 303 (437)
.|+.|.+|.+.+++||+.+|.+|++||++.|.||++++||+.+.. .||++++|+|+|+|+++.+.
T Consensus 60 ~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~----~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 60 QPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKG----KIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp CCEEEETTSCSSCHHHHHHSTTCCTTCEEEEEECGGGTTTTTCBT----TBCTTCCEEEEEEEEEEECC
T ss_pred cCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEEChHHhcCCCCCC----CCCCCCeEEEEEEEEEEEcC
Confidence 899999999999999999999999999999999999999998855 59999999999999998754
No 57
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.75 E-value=9.5e-19 Score=153.38 Aligned_cols=130 Identities=16% Similarity=0.173 Sum_probs=94.1
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCCCC
Q 013755 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (437)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i~~ 140 (437)
++++||+|+|+|++++.||++|+||+.. .|+.|.+|.+++||||+++|.+|++|++++| .|||++|||+++..
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v--~Ippe~aYGe~~~~---- 74 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDV--AVGANDAYGQYDEN---- 74 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEE--ECSTTTTSSCCCTT----
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEE--EeCcHHhcCCCChh----
Confidence 3789999999999998899999999875 8999999999999999999999999999999 99999999998754
Q ss_pred CCcEEEEEEEeceeeeeccCCCccceEEEEecc--ccCCCCCCCCeEEEEEEEEcCCCeeeec
Q 013755 141 NSVVQFEVELVSWITVVDLSKDGGIVKKILEKG--ERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (437)
Q Consensus 141 ~~~~~f~v~l~~~~~~~d~~~dg~v~k~i~~~G--~g~~~p~~~~~V~v~~~~~~~~g~~v~~ 201 (437)
+++.|....+..... ...|..+......| .+...-...+.|++|+||+|++.++.|+
T Consensus 75 ---lV~~vp~~~f~~~~~-~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~ 133 (196)
T 2kfw_A 75 ---LVQRVPKDVFMGVDE-LQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFN 133 (196)
T ss_dssp ---TCEEECGGGCCCSSC-CCTTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEE
T ss_pred ---hEEEEEHHHCCCccC-cccCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEE
Confidence 233333322211000 11111111100000 0011223568999999999999998874
No 58
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.74 E-value=4.8e-19 Score=149.80 Aligned_cols=123 Identities=22% Similarity=0.426 Sum_probs=93.1
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccC-------------CCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCC
Q 013755 61 TPEFGDEVTIHYVGTLLDGTKFDSTRD-------------RYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSE 127 (437)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~G~~~~st~~-------------~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~ 127 (437)
.++.||.|+|||++++.||++|+||+. ...|+.|.+|.+++++||+++|.+|++|++++| .|||+
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v--~ipp~ 78 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTV--KIPAE 78 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEE--EECTT
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEE--EECcH
Confidence 478999999999999889999999973 337999999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCCCCCCcEEEEEEEeceee-------eeccCCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeee
Q 013755 128 LRFGVEGRDSLPPNSVVQFEVELVSWIT-------VVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVA 200 (437)
Q Consensus 128 ~ayg~~~~~~i~~~~~~~f~v~l~~~~~-------~~d~~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~ 200 (437)
+|||+++... ++.+.+..+.. ...+.-.+ ..-+|+.- .++.|++|+||++++.++.|
T Consensus 79 ~aYG~~~~~~-------v~~v~~~~f~~~~~~~~~G~~~~~~~-~~~~V~~v--------~~~~v~vD~NHPLAG~~L~F 142 (151)
T 1ix5_A 79 KAYGNRNEML-------IQKIPRDAFKEADFEPEEGMVILAEG-IPATITEV--------TDNEVTLDFNHELAGKDLVF 142 (151)
T ss_dssp TSSCSCCSTT-------BCCEETHHHHTSTTCCCTTEEEESSS-CEEEEEEE--------ETTEEEEECCCSSTTCCEEE
T ss_pred HHCCCCCccE-------EEEEEHHHcCccCCcccccCEEEECC-eEEEEEEE--------cCCEEEEeCCCCCCCCeEEE
Confidence 9999987553 33333333311 00000111 11122222 35799999999999999888
Q ss_pred c
Q 013755 201 K 201 (437)
Q Consensus 201 ~ 201 (437)
+
T Consensus 143 ~ 143 (151)
T 1ix5_A 143 T 143 (151)
T ss_dssp E
T ss_pred E
Confidence 5
No 59
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.74 E-value=1.2e-17 Score=143.66 Aligned_cols=123 Identities=18% Similarity=0.221 Sum_probs=94.5
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCCCC
Q 013755 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (437)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i~~ 140 (437)
+++.||.|+|+|++++.+|++|+||+.. .|+.|.+|.++++|||+++|.+|++|++++| .|||++|||+++..
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v--~ippe~aYG~~~~~---- 74 (171)
T 2k8i_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDV--AVGANDAYGQYDEN---- 74 (171)
T ss_dssp CCCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEE--EEETTTSSCCCCTT----
T ss_pred cCCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEE--EECcHHhcCCCChh----
Confidence 3789999999999998899999999875 8999999999999999999999999999999 99999999998644
Q ss_pred CCcEEEEEEEeceeeeecc---------CCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeec
Q 013755 141 NSVVQFEVELVSWITVVDL---------SKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (437)
Q Consensus 141 ~~~~~f~v~l~~~~~~~d~---------~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~ 201 (437)
+++.+....+.....+ ..+|.+.-+|+.- ..+.|++|+||+|++.++.|+
T Consensus 75 ---~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v--------~~~~V~vD~NHPLAGk~L~F~ 133 (171)
T 2k8i_A 75 ---LVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAV--------EDDHVVVDGNHMLAGQNLKFN 133 (171)
T ss_dssp ---SEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEE--------CSSEEEEESCCSSCCCEEEEE
T ss_pred ---hEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEE--------cCCEEEEeCCCCCCCCeEEEE
Confidence 3444443333211001 1223211122222 358999999999999998885
No 60
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.73 E-value=1.5e-16 Score=141.20 Aligned_cols=145 Identities=33% Similarity=0.364 Sum_probs=121.4
Q ss_pred EEEEEEEeeeecccCCCCCChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChH-HHHHHHhhhHHH
Q 013755 291 LYYEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDD-EQKLVKSLRVSC 369 (437)
Q Consensus 291 l~~~vel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~~~~~~ 369 (437)
......+..+++..+.|+++.+++...+..++..|+.++..|+|++|+..|++++.+.|..+..... .......+...+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISC 90 (198)
T ss_dssp -----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 3445567788899999999999999999999999999999999999999999999998876544322 222334455688
Q ss_pred hhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 370 WLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 370 ~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++++|.||+++++|++|+.+|+++++++|++..+++++|.+|..+|++++|+.+|+++++++|++.
T Consensus 91 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 91 NLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 999999999999999999999999999999999999999999999999999999999999999875
No 61
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.72 E-value=7.9e-17 Score=150.54 Aligned_cols=117 Identities=35% Similarity=0.499 Sum_probs=102.4
Q ss_pred eeccC--CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCC
Q 013755 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (437)
Q Consensus 156 ~~d~~--~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~ 233 (437)
+.+++ .++++.++++++|.|...|..++.|+++|.. ++.||++||++ +.+
T Consensus 42 ~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g---------------------------~~~dG~~fdss-~~~ 93 (280)
T 1q1c_A 42 GVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTG---------------------------WLLDGTKFDSS-LDR 93 (280)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEE---------------------------EETTSCEEEES-TTS
T ss_pred ccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEE---------------------------EECCCCEEEec-ccC
Confidence 34566 7899999999999998779999998886654 44567788887 677
Q ss_pred CCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeecc
Q 013755 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKE 303 (437)
Q Consensus 234 ~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~~ 303 (437)
+.|+.|.+|.+.+++||+.+|.+|++||++.|.|||+++||..+.+. .||++++++|+|+|+.+...
T Consensus 94 ~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~~~---~Ip~~~~lvf~Vel~~i~~~ 160 (280)
T 1q1c_A 94 KDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP---KIPPNATLVFEVELFEFKGE 160 (280)
T ss_dssp SSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEECE
T ss_pred CCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEECcHHhCCCcCccC---CCCCCCcEEEEEEeeeeccc
Confidence 78999999999999999999999999999999999999999988764 69999999999999998753
No 62
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.72 E-value=4.4e-18 Score=152.49 Aligned_cols=122 Identities=30% Similarity=0.419 Sum_probs=91.5
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCC-------------CCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCC
Q 013755 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDR-------------YDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSE 127 (437)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~G~~~~st~~~-------------~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~ 127 (437)
.++.||.|+|||++++ ||++|+||+.. +.|+.|.+|.+++|+||+++|.+|++|++++| .|||+
T Consensus 1 ~i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v--~Ippe 77 (231)
T 3prb_A 1 MVEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREV--VLPPE 77 (231)
T ss_dssp CCCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEE--EECGG
T ss_pred CCCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEE--EeCcH
Confidence 3689999999999999 99999999852 47999999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCCCCCCcEEEEEEEeceeeeeccC-CCccc------eEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeee
Q 013755 128 LRFGVEGRDSLPPNSVVQFEVELVSWITVVDLS-KDGGI------VKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVA 200 (437)
Q Consensus 128 ~ayg~~~~~~i~~~~~~~f~v~l~~~~~~~d~~-~dg~v------~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~ 200 (437)
+|||+++.. ++..+....+.. .++. ..|.. .-+|+.- .++.|++|+||+|+|.++.|
T Consensus 78 ~AYGe~~~~-------lv~~vp~~~f~~-~~~~~~vG~~~~~~~~~g~V~~v--------~~~~V~vD~NHPLAGk~L~F 141 (231)
T 3prb_A 78 KAFGKRDPS-------KIKLIPLSEFTK-RGIKPIKGLTITIDGIPGKIVSI--------NSGRVLVDFNHELAGKEVKY 141 (231)
T ss_dssp GTTCCCCGG-------GEEEEETHHHHT-TTCCCCTTCEEEETTEEEEEEEE--------ETTEEEEECSCTTTTCCEEE
T ss_pred HhcCCCChH-------HEEecCHHHCCc-ccCCCCCCcEEEecCCCEEEEEE--------cCCEEEEeCCCccCCCEEEE
Confidence 999998754 333333222211 0000 00110 1122221 35799999999999999887
Q ss_pred c
Q 013755 201 K 201 (437)
Q Consensus 201 ~ 201 (437)
+
T Consensus 142 ~ 142 (231)
T 3prb_A 142 R 142 (231)
T ss_dssp E
T ss_pred E
Confidence 4
No 63
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.72 E-value=6.6e-17 Score=143.85 Aligned_cols=104 Identities=27% Similarity=0.417 Sum_probs=90.9
Q ss_pred CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEE
Q 013755 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (437)
Q Consensus 161 ~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~ 240 (437)
.+.++.++++++|+|. .|..++.|+|+| ++++.||++||++ +.|++|.
T Consensus 115 ~~sGl~y~vl~~G~G~-~p~~gd~V~V~Y---------------------------~g~l~dG~vfDss----~~P~~f~ 162 (219)
T 3oe2_A 115 LADGILMTELTPGTGP-KPDANGRVEVRY---------------------------VGRLPDGKIFDQS----TQPQWFR 162 (219)
T ss_dssp CGGGCEEEEEECCCSC-CCCTTSEEEEEE---------------------------EEECTTSCEEEEC----SSCEEEE
T ss_pred CCCCeEEEEEecCCCc-cCCCCCEEEEEE---------------------------EEEECCCCEeecc----CCcEEEE
Confidence 4667899999999984 688888888755 5555677788876 6899999
Q ss_pred cCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeee
Q 013755 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (437)
Q Consensus 241 lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~ 301 (437)
+| .+|+||+.+|.+|++|+++.|+|||+++||+.+.+. .|||+++|+|+|+|+++.
T Consensus 163 lG--~vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~~~---~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 163 LD--SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGD---LIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GG--GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEE
T ss_pred ec--chhHHHHHHHhCCCCCCEEEEEECchhcCCCCCCCC---CCCCCCeEEEEEEEEEEe
Confidence 97 899999999999999999999999999999998864 699999999999999985
No 64
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.70 E-value=9.8e-17 Score=142.92 Aligned_cols=108 Identities=25% Similarity=0.409 Sum_probs=93.2
Q ss_pred CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEE
Q 013755 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (437)
Q Consensus 161 ~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~ 240 (437)
.+.++.++++++|+| ..|..++.|+|+| ++++.||++||++ +.++.|++|.
T Consensus 104 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y---------------------------~g~l~dG~vfdss-~~~g~p~~f~ 154 (213)
T 1fd9_A 104 LPSGLQYKVINSGNG-VKPGKSDTVTVEY---------------------------TGRLIDGTVFDST-EKTGKPATFQ 154 (213)
T ss_dssp CTTSCEEEEEECCCS-CCCCTTCEEEEEE---------------------------EEEETTSCEEEEH-HHHCSCEEEE
T ss_pred CCCccEEEEEecCCC-ccCCCCCEEEEEE---------------------------EEEECCCCEEeec-cccCCCEEEE
Confidence 456789999999998 4788888888755 5555677888887 6667899999
Q ss_pred cCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeeec
Q 013755 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (437)
Q Consensus 241 lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~~ 302 (437)
+ +.+++||+.+|.+|++||++.|.||++++||..+.+. .|||+++|+|+|+|+++.+
T Consensus 155 l--g~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~~~---~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 155 V--SQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGG---PIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp G--GGSCHHHHHHHTTCCTTCEEEEEECGGGTTTTCCCSS---SCCTTCCEEEEEEEEEEEC
T ss_pred c--CchhhHHHHHHcCCCCCCEEEEEECchhccCccCCCC---CCCCCCeEEEEEEEEEEEc
Confidence 9 4899999999999999999999999999999988654 6999999999999999874
No 65
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.70 E-value=8.7e-17 Score=132.76 Aligned_cols=111 Identities=23% Similarity=0.296 Sum_probs=91.8
Q ss_pred CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEE
Q 013755 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (437)
Q Consensus 161 ~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~ 240 (437)
.+.++.++++++|.|. .|..++.|+++|..+ +.||++||++ +.++.|+.|.
T Consensus 10 ~~~Gl~~~~l~~G~G~-~~~~gd~V~v~Y~g~---------------------------~~dG~~fdss-~~~~~p~~f~ 60 (129)
T 1u79_A 10 SPSGLAFCDKVVGYGP-EAVKGQLIKAHYVGK---------------------------LENGKVFDSS-YNRGKPLTFR 60 (129)
T ss_dssp CTTSCEEEEEECCSSC-BCCTTCEEEEEEEEE---------------------------CTTSCEEEEH-HHHTSCEEEE
T ss_pred CCCCeEEEEEEcCCCC-CCCCCCEEEEEEEEE---------------------------ECCCCEEEec-CCCCCCEEEE
Confidence 3457899999999984 577888888766554 4466778777 5557899999
Q ss_pred cCCCCcchHHHHHhcc------cccCcEEEEEEcCCCCCCcccccc--ccccCCCCceEEEEEEEeee
Q 013755 241 TDEEQVIAGLDRVAAT------MKKEEWAIVTINHEYGFGNVEAKR--DLATIPSCAKLYYEVEMMDF 300 (437)
Q Consensus 241 lg~~~~~~gl~~~l~~------m~~GE~~~i~i~~~~~yg~~~~~~--~~~~ip~~~~l~~~vel~~~ 300 (437)
+|.+.+++||+.+|.+ |++||++.|.|||.++||+.+... .-..||++++++|+|+|+++
T Consensus 61 lG~~~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 61 IGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TTSSSSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred eCCCCccHHHHHHhcccccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999999999988 999999999999999999887631 00259999999999999875
No 66
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.5e-16 Score=125.81 Aligned_cols=85 Identities=34% Similarity=0.514 Sum_probs=75.2
Q ss_pred EEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEE
Q 013755 215 SYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYE 294 (437)
Q Consensus 215 ~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~ 294 (437)
||++++.||++|+++ +.++.|+.|.+|.+.+++||+.+|.+|++||++.|.+|++++||..+... .||++++++|+
T Consensus 15 ~y~~~~~dG~~~d~s-~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~---~Ip~~~~l~f~ 90 (102)
T 2pbc_A 15 HYTGKLEDGTEFDSS-LPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPP---KIPGGATLVFE 90 (102)
T ss_dssp EEEEECTTSCEEEES-TTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEE
T ss_pred EEEEEECCCCEEEeC-CCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCC---CcCcCCeEEEE
Confidence 445555577788887 77778999999999999999999999999999999999999999988754 69999999999
Q ss_pred EEEeeeecc
Q 013755 295 VEMMDFIKE 303 (437)
Q Consensus 295 vel~~~~~~ 303 (437)
|+|+++...
T Consensus 91 v~l~~v~~~ 99 (102)
T 2pbc_A 91 VELLKIERR 99 (102)
T ss_dssp EEEEEEGGG
T ss_pred EEEEEeccc
Confidence 999999764
No 67
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.69 E-value=1.3e-16 Score=131.49 Aligned_cols=105 Identities=24% Similarity=0.386 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
..+.+..+++.|+.+|+.|+|++|+..|++|+++.|.+ ..+|+|+|.||+++|+|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~---------------~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN---------------ITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 45678889999999999999999999999999998875 377999999999999999999999999
Q ss_pred HHhCCCC-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 394 LDCDCHN-------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 394 l~~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
|+++|++ .++|+++|.++..++++++|+.+|+++|.+.|+
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 9998876 368999999999999999999999999999885
No 68
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.69 E-value=1.9e-16 Score=134.77 Aligned_cols=106 Identities=10% Similarity=0.078 Sum_probs=100.0
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..++..|..+++.|+|++|+..|++++.+.|.+. .+|+++|.||..+|+|++|+.+|++++
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~---------------~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNV---------------DYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 45577899999999999999999999999999998764 679999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+++|+++.+|+++|.||..+|++++|+..|++++++.|+++
T Consensus 98 ~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 98 ALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred hhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999999753
No 69
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.68 E-value=3.5e-16 Score=140.33 Aligned_cols=105 Identities=30% Similarity=0.552 Sum_probs=91.0
Q ss_pred CCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeeccCCCCeeEEEEEEEEEEEecCccEEeecCCCCCCCeEEE
Q 013755 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (437)
Q Consensus 161 ~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~~~~~~~~~~~~~v~y~~~~~~g~~fd~~~~~~~~p~~f~ 240 (437)
.+.++.++++++|.|. .|..+|.|+++| ++++.||++||++ +.++.|+.|.
T Consensus 119 ~~sGl~y~vl~~G~G~-~p~~gD~V~V~Y---------------------------~g~l~dG~vfdss-~~~g~p~~f~ 169 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKGE-APKDSDTVVVNY---------------------------KGTLIDGKEFDNS-YTRGEPLSFR 169 (224)
T ss_dssp CTTSCEEEEEECCSSC-CCCTTCEEEEEE---------------------------EEEETTSCEEEEG-GGGTSCEEEE
T ss_pred CCCceEEEEEecccCc-cccCCCEEEEEE---------------------------EEEeCCCCEEeec-cccCCCEEEE
Confidence 3567889999999985 778888888755 5555677888888 7778899999
Q ss_pred cCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeee
Q 013755 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (437)
Q Consensus 241 lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~ 300 (437)
+ +.+++||+.+|.+|++||++.|.||++++||..+.+ .||++++++|+|+|+++
T Consensus 170 l--g~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~~----~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 170 L--DGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVP----GIPPNSTLVFDVELLDV 223 (224)
T ss_dssp G--GGSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBT----TBCTTCCEEEEEEEEEE
T ss_pred c--CCcchhHHHHHcCCCCCCEEEEEECchhhcCcCCCC----CCCCCCEEEEEEEEEEe
Confidence 9 489999999999999999999999999999988865 39999999999999986
No 70
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.67 E-value=1.1e-16 Score=135.86 Aligned_cols=118 Identities=18% Similarity=0.238 Sum_probs=91.9
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCCCCC
Q 013755 62 PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPPN 141 (437)
Q Consensus 62 ~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i~~~ 141 (437)
++.||.|+|||+++ .||++|+||+ +.|.+|.++++|||+++|.+|++|++++| .|||++|||+++
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v--~ipp~~aYG~~~------- 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQA--HVPAEKAYGPHD------- 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEE--EECGGGTTCCCC-------
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEE--EECcHHHcCCCC-------
Confidence 68999999999999 8999999987 89999999999999999999999999999 999999999875
Q ss_pred CcEEEEEEEeceeeeecc---------CCCccceEEEEeccccCCCCCCCCeEEEEEEEEcCCCeeeec
Q 013755 142 SVVQFEVELVSWITVVDL---------SKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (437)
Q Consensus 142 ~~~~f~v~l~~~~~~~d~---------~~dg~v~k~i~~~G~g~~~p~~~~~V~v~~~~~~~~g~~v~~ 201 (437)
..+++.+.+..+.....+ ..+|..+.-++.+- .++.|++|+||++++.++.|+
T Consensus 68 ~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v-------~~~~v~vD~NHPLAGk~L~F~ 129 (158)
T 3cgm_A 68 PEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAV-------EGEEVTVDFNHPLAGKDLDFQ 129 (158)
T ss_dssp GGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEE-------ETTEEEEECSCTTTTCCEEEE
T ss_pred cceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEE-------CCCEEEEeCCccccCCEEEEE
Confidence 345666665554311111 12233222222222 357999999999999998875
No 71
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.66 E-value=1.5e-16 Score=127.50 Aligned_cols=86 Identities=24% Similarity=0.399 Sum_probs=74.6
Q ss_pred CCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecC-CCCCCCCCCC
Q 013755 57 VDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLP-SELRFGVEGR 135 (437)
Q Consensus 57 ~g~~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip-~~~ayg~~~~ 135 (437)
++ +.++.||.|+|+|++++ ||++|++|+ +.|+.|.+|.+++||||+++|.+|++|++++| .|| |+. ||..+
T Consensus 26 ~~-~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v--~i~fP~~-Yg~~~- 97 (113)
T 1hxv_A 26 SD-KKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTL--ALTFPSD-YHVKE- 97 (113)
T ss_dssp ----CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEE--CCCCCTT-SSSSG-
T ss_pred CC-CCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEE--EEeCchh-hCcCC-
Confidence 35 68999999999999999 999999996 48999999999999999999999999999999 885 443 88765
Q ss_pred CCCCCCCcEEEEEEEece
Q 013755 136 DSLPPNSVVQFEVELVSW 153 (437)
Q Consensus 136 ~~i~~~~~~~f~v~l~~~ 153 (437)
.++++++|+|+|.++
T Consensus 98 ---~~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 98 ---LQSKPVTFEVVLKAI 112 (113)
T ss_dssp ---GGSCCCEEEEEECCB
T ss_pred ---CCCCEEEEEEEEEEE
Confidence 267899999999876
No 72
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=7.2e-16 Score=126.18 Aligned_cols=104 Identities=27% Similarity=0.348 Sum_probs=98.4
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..++..|..+++.|+|++|+..|++++...|.+ ..+++++|.||.++|+|++|+.+|++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 57789999999999999999999999999998875 377999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC------CCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD------PQNR 435 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~------P~n~ 435 (437)
+|+++.+++++|.++..+|++++|+.+|+++++++ |+++
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~ 112 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHH
Confidence 99999999999999999999999999999999999 7664
No 73
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.64 E-value=2.1e-15 Score=129.63 Aligned_cols=107 Identities=23% Similarity=0.180 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..++..|..++..|+|++|+..|++++.+.|.+ ..+++++|.||+++|+|++|+.+|++++
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al 72 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN---------------PIYLSNRAAAYSASGQHEKAAEDAELAT 72 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3568889999999999999999999999999998865 3779999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.+
T Consensus 73 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 73 VVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 999999999999999999999999999999999999999875
No 74
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.63 E-value=3.3e-15 Score=126.56 Aligned_cols=106 Identities=18% Similarity=0.151 Sum_probs=99.9
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
.....+...|..++..|+|++|+..|++++...|.+. .+++++|.||..+|+|++|+.+|++++.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDS---------------RFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4577889999999999999999999999999988753 6789999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
++|+++.+++++|.+|..+|++++|+..|+++++++|++++
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 124 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPE 124 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGG
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCc
Confidence 99999999999999999999999999999999999998764
No 75
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.61 E-value=2.5e-15 Score=127.59 Aligned_cols=106 Identities=9% Similarity=-0.006 Sum_probs=97.4
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
+....++..|..|++.|+|++|+..|++++++.|.+. .+|+++|.||.++|++++|+.+|+++++
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP---------------KAHRFLGLLYELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 4456678899999999999999999999999988763 7799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHH-HHHHHHhCCCCCC
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELD-IKKAIEADPQNRN 436 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~-~~~al~l~P~n~~ 436 (437)
++|+++.+++++|.+|..+|++++|... +++|++++|+|+.
T Consensus 94 ~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~ 135 (150)
T 4ga2_A 94 LNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPA 135 (150)
T ss_dssp HCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHH
T ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHH
Confidence 9999999999999999999999887765 6999999999864
No 76
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.61 E-value=5.6e-15 Score=123.89 Aligned_cols=107 Identities=19% Similarity=0.170 Sum_probs=100.0
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
......+...|..++..|+|++|+..|++++...|.+. .+|+++|.||.++|+|++|+.+|++++
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al 79 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA---------------RYFLGLGACRQSLGLYEQALQSYSYGA 79 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34567888999999999999999999999999988753 679999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
.++|+++.+++++|.+|..+|++++|+..|+++++++|++++
T Consensus 80 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 121 (142)
T 2xcb_A 80 LMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPA 121 (142)
T ss_dssp HHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGG
T ss_pred hcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcc
Confidence 999999999999999999999999999999999999998764
No 77
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.59 E-value=1.1e-14 Score=142.39 Aligned_cols=126 Identities=35% Similarity=0.519 Sum_probs=110.4
Q ss_pred ChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCC-CCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHH
Q 013755 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIE 388 (437)
Q Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~ 388 (437)
+.++....+..++..|+.+++.|+|++|+..|++|+++.+... ....++..........+|+|+|.||+++++|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 4778889999999999999999999999999999999765421 011222333455667899999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 389 LCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 389 ~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|++||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|+++
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999999875
No 78
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.59 E-value=7.8e-15 Score=119.75 Aligned_cols=102 Identities=14% Similarity=0.068 Sum_probs=90.6
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~ 399 (437)
.+...|..+++.|++++|+..|++++...|.+. .+++++|.++..+|++++|+..|+++++++|+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPERE---------------EAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 357889999999999999999999999988753 77999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 400 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
++.+++.+|.+|..+|++++|+..|+++++++|++.+
T Consensus 84 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 84 DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999999999999998864
No 79
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.53 E-value=5.2e-14 Score=116.30 Aligned_cols=103 Identities=27% Similarity=0.369 Sum_probs=97.2
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++...|.+ ..+++++|.|+..+++|++|+.++++++++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---------------AVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 36778999999999999999999999999998764 367999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
+|+++.+++++|.+|..+|++++|+..|+++++++|++
T Consensus 73 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 73 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 99999999999999999999999999999999999873
No 80
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.52 E-value=4.6e-14 Score=126.43 Aligned_cols=119 Identities=12% Similarity=0.015 Sum_probs=96.5
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChH-HHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDD-EQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..+..+|..++..|+|++|+..|++++...|.+....-. ...........+++++|.+|.++|++++|+..|++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999998764310000 000000111222334999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+|+++.+++++|.+|..+|++++|+..|+++++++|++.+
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999999999863
No 81
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.50 E-value=2.4e-13 Score=108.30 Aligned_cols=104 Identities=23% Similarity=0.213 Sum_probs=98.0
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++...|.+ ..+++++|.++..++++++|+..++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999998764 367999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|++..+++++|.++..+|++++|+..|+++++++|++.
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 999999999999999999999999999999999999875
No 82
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.50 E-value=1.4e-14 Score=122.86 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=88.3
Q ss_pred HhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHH
Q 013755 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKA 403 (437)
Q Consensus 324 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a 403 (437)
.|..+..+|++++|+..|++++...|..+ ..++++|.+|+++|+|++|+.+|+++++++|+++.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~---------------~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKS---------------IKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHH---------------TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 57788889999999999999999877643 558899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 404 LYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 404 ~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
|+++|.+|..+|++++|+..|+++++++|++++
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 100 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQKD 100 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999999999999999999864
No 83
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.50 E-value=4.3e-13 Score=114.08 Aligned_cols=110 Identities=24% Similarity=0.362 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHH
Q 013755 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELC 390 (437)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~ 390 (437)
.......+..+...|..++..|+|++|+..|++++...|.+ ..+++++|.++..+++|++|+.++
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35667889999999999999999999999999999997764 367999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 391 SKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 391 ~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+++++++|.++.+++++|.++..+|++++|+..|+++++++|++.
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999999874
No 84
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.48 E-value=1.4e-13 Score=145.54 Aligned_cols=120 Identities=17% Similarity=0.154 Sum_probs=72.7
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC------------ChHH-------HHHHHhhhHHHhhhHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------------VDDE-------QKLVKSLRVSCWLNSAAC 376 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~------------~~~~-------~~~~~~~~~~~~~nla~~ 376 (437)
..+..+.+.|+.+.+.|+|++|+..|++||++.|+.... ..++ ..++......+|+|+|.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 346667777777777777777777777777776653210 0000 001111123456666666
Q ss_pred HHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 377 ~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|.++|++++|+.+|++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|++.
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 66666666666666666666666666666666666666666666666666666666654
No 85
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.7e-13 Score=112.18 Aligned_cols=107 Identities=36% Similarity=0.510 Sum_probs=98.6
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++...|.. .....+++++|.+|..+++|++|+.+|++++++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP------------QDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc------------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 46778999999999999999999999999987642 123578999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|++..+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNK 133 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 999999999999999999999999999999999999875
No 86
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.47 E-value=2.9e-13 Score=110.50 Aligned_cols=105 Identities=29% Similarity=0.389 Sum_probs=98.3
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
.....+...|..++..|+|++|+..|++++...|.+ ..+++++|.++..++++++|+.+++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------AKLYSNRAACYTKLLEFQLALKDCEECIQ 78 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 347788999999999999999999999999987654 36799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++|++..+++++|.++..+|++++|+..|+++++++|++.
T Consensus 79 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred hCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCch
Confidence 9999999999999999999999999999999999999875
No 87
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.47 E-value=8.9e-13 Score=106.86 Aligned_cols=110 Identities=31% Similarity=0.354 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHH
Q 013755 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELC 390 (437)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~ 390 (437)
.......+..+...|..++..|+|++|+..|++++...|.. ..++.++|.++..++++++|+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 69 (131)
T 2vyi_A 5 SEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------AVYFCNRAAAYSKLGNYAGAVQDC 69 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhhchHHHHHHH
Confidence 34456778899999999999999999999999999987754 367899999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 391 SKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 391 ~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++++..+|+++.+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 114 (131)
T 2vyi_A 70 ERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNE 114 (131)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccch
Confidence 999999999999999999999999999999999999999999874
No 88
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.47 E-value=5.5e-13 Score=108.82 Aligned_cols=104 Identities=11% Similarity=0.047 Sum_probs=95.8
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~ 399 (437)
.+...|..++..|+|++|+..|++++...|.+.. ...+++++|.+++++|+|++|+..|++++..+|+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~------------~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~ 71 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY------------TPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT 71 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC
Confidence 4678899999999999999999999999886531 2367899999999999999999999999999999
Q ss_pred C---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 400 N---VKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 400 ~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+ +.+++++|.+|..+|++++|+..|+++++..|+++
T Consensus 72 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~ 110 (129)
T 2xev_A 72 HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSD 110 (129)
T ss_dssp STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCh
Confidence 9 89999999999999999999999999999999875
No 89
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.47 E-value=2e-13 Score=128.35 Aligned_cols=103 Identities=28% Similarity=0.381 Sum_probs=97.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..++..|+.+++.|+|++|+..|++|+...|.+ ..+++++|.+|.++|+|++|+.+|+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---------------AVYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 5678999999999999999999999999998865 3779999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|++..+++++|.+|..+|++++|+..|+++++++|+++
T Consensus 69 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 99999999999999999999999999999999999875
No 90
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.46 E-value=1.1e-13 Score=117.01 Aligned_cols=91 Identities=20% Similarity=0.230 Sum_probs=83.7
Q ss_pred hCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCH----------HHHHHHHHHHHHhCCC
Q 013755 330 KNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDY----------QGAIELCSKVLDCDCH 399 (437)
Q Consensus 330 ~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~----------~~Ai~~~~~al~~~p~ 399 (437)
+.++|++|+..|++++.+.|.+. .+|+|+|.++..++++ ++|+..|++||+++|+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~a---------------ea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDA---------------DNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhHHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC
Confidence 44679999999999999998864 7799999999999876 4999999999999999
Q ss_pred CHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHhCCCCC
Q 013755 400 NVKALYRRAQAYMEIA-----------DLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 400 ~~~a~~~~g~~~~~lg-----------~~~~A~~~~~~al~l~P~n~ 435 (437)
+..+|+++|.+|..+| +|++|+.+|++|++++|+|.
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999885 89999999999999999874
No 91
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.43 E-value=6.6e-13 Score=115.63 Aligned_cols=69 Identities=17% Similarity=0.093 Sum_probs=66.0
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..++.++|.+|.++|+|++|+.+|+++++++|+++.+++++|.+|..+|++++|+.+|++|++++|+++
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 467899999999999999999999999999999999999999999999999999999999999999763
No 92
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.43 E-value=1.1e-12 Score=118.57 Aligned_cols=103 Identities=20% Similarity=0.280 Sum_probs=96.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhc-cCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVS-EDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++..|..++..|+|++|+..|++++...| .+ ..+++++|.|+..+|+|++|+.+|++++++
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 71 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD---------------SVTAYNCGVCADNIKKYKEAADYFDIAIKK 71 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC---------------cHHHHHHHHHHHHhhcHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999987 33 266888999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|++..+++++|.+|..+|++++|+..|+++++++|+++
T Consensus 72 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 72 NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 999999999999999999999999999999999999875
No 93
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.43 E-value=4.3e-13 Score=141.84 Aligned_cols=68 Identities=15% Similarity=0.036 Sum_probs=65.0
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
..+|+|+|.+|.++|++++|+.+|++||+++|+++.+++++|.+|..+++|++|++.|++++++.|++
T Consensus 111 ~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 111 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 57899999999999999999999999999999999999999999999999999999999999987753
No 94
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.43 E-value=1.4e-13 Score=111.24 Aligned_cols=91 Identities=14% Similarity=0.081 Sum_probs=80.9
Q ss_pred hCCcHHHHHHHHHHHHHh---hccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHH
Q 013755 330 KNGKYERAGKKYNKAADC---VSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYR 406 (437)
Q Consensus 330 ~~g~~~~A~~~y~~al~~---~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~ 406 (437)
..|+|++|+..|++++.. .|. ...+++++|.+|..+|+|++|+.+++++++++|+++.++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~---------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 66 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD---------------LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVF 66 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH---------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHH
Confidence 368999999999999998 443 24779999999999999999999999999999999999999
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 407 RAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 407 ~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|.++..+|++++|+..|++++.+.|+++
T Consensus 67 l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 95 (117)
T 3k9i_A 67 YAMVLYNLGRYEQGVELLLKIIAETSDDE 95 (117)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Confidence 99999999999999999999999999875
No 95
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.42 E-value=7.2e-13 Score=104.52 Aligned_cols=101 Identities=21% Similarity=0.274 Sum_probs=94.2
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~ 399 (437)
.+...|..++..|+|++|+..|++++...|.. ..+++++|.++..++++++|+.+++++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE---------------SKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 45678999999999999999999999997764 367899999999999999999999999999999
Q ss_pred --CHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhCCCCC
Q 013755 400 --NVKALYRRAQAYMEI-ADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 400 --~~~a~~~~g~~~~~l-g~~~~A~~~~~~al~l~P~n~ 435 (437)
+..+++.+|.++..+ |++++|++.|++++...|++.
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 73 EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999999999999 999999999999999999875
No 96
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.42 E-value=1.2e-12 Score=117.98 Aligned_cols=103 Identities=19% Similarity=0.161 Sum_probs=97.6
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..+++.|++++|+..|++++...|.+. .+++++|.++.++|++++|+..++++++++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~~~ 69 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQDP---------------EALYWLARTQLKLGLVNPALENGKTLVART 69 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45678899999999999999999999999988753 779999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEI-----------ADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~l-----------g~~~~A~~~~~~al~l~P~n~ 435 (437)
|+++.+++.+|.++..+ |++++|+..|+++++++|++.
T Consensus 70 P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 70 PRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 99999999999999999 999999999999999999875
No 97
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.41 E-value=1.9e-12 Score=105.06 Aligned_cols=103 Identities=26% Similarity=0.340 Sum_probs=95.5
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
+.+..+...|..++..|+|++|+..|++++...|.. ..+++++|.+|..+++|++|+.++++++.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 356788999999999999999999999999997654 36789999999999999999999999999
Q ss_pred hCCCC-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 396 CDCHN-------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 396 ~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
++|.+ ..+++++|.+|..+|++++|+..|++++++.|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 99877 899999999999999999999999999999884
No 98
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=1.2e-12 Score=128.46 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=72.3
Q ss_pred HHHHHHHhhHHHhCCc-HHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 318 AGRKKEEGNLLFKNGK-YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~-~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
...+..+|..+...|+ |++|+..|++|+.+.|.+ ..+|+++|.++..+|++++|+.+|+++|++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~---------------~~a~~~~g~~~~~~g~~~eAl~~~~kal~l 195 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN---------------YQVWHHRRVLVEWLRDPSQELEFIADILNQ 195 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 3455566666666665 666666666666666554 356777777777777777777777777777
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|++..+|+++|.++..+|++++|+.+|+++++++|+|.
T Consensus 196 dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~ 234 (382)
T 2h6f_A 196 DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234 (382)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Confidence 777777777777777777777777777777777777664
No 99
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.37 E-value=3.7e-12 Score=113.86 Aligned_cols=97 Identities=19% Similarity=0.161 Sum_probs=87.6
Q ss_pred HHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHH
Q 013755 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK 402 (437)
Q Consensus 323 ~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~ 402 (437)
..|..+++.|+|++|+..|++++++.|.+. .+++++|.+|..+|++++|+.+|+++++++|+++.
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPNNV---------------DCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 399999999999999999999999988753 77999999999999999999999999999999998
Q ss_pred HHHHHHHHHHH-----------------------------------hccHHHHHHHHHHHHHhCCCC
Q 013755 403 ALYRRAQAYME-----------------------------------IADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 403 a~~~~g~~~~~-----------------------------------lg~~~~A~~~~~~al~l~P~n 434 (437)
+++++|.+|.. +|+|++|+.+|++|++++|++
T Consensus 124 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 124 ANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 88888777643 346889999999999999974
No 100
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=2.2e-12 Score=126.60 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=99.4
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccC-HHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD-YQGAIELCSKVL 394 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~-~~~Ai~~~~~al 394 (437)
.....+...|..+.+.|+|++|+..|+++|.+.|.+ ..+|+++|.++..+|+ +++|+.+|+++|
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~---------------~~a~~~~g~~l~~~g~d~~eAl~~~~~al 159 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAAN---------------YTVWHFRRVLLKSLQKDLHEEMNYITAII 159 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC---------------HHHHHHHHHHHHHcccCHHHHHHHHHHHH
Confidence 457778899999999999999999999999999875 3789999999999997 999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+++|++..+|+++|.++..+|++++|+.+|++|++++|+|.
T Consensus 160 ~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 160 EEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCH
Confidence 99999999999999999999999999999999999999985
No 101
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.37 E-value=1.1e-11 Score=99.39 Aligned_cols=103 Identities=33% Similarity=0.442 Sum_probs=96.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|++++|+..|++++...|.. ..+++++|.++..++++++|+..+++++..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 5678889999999999999999999999987653 3678999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|.+..+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 111 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 99999999999999999999999999999999999875
No 102
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.37 E-value=7.1e-12 Score=108.47 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=97.5
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHH-HHhccCH--HHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAAC-CLKLKDY--QGAIELCSKVL 394 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~~~~~~--~~Ai~~~~~al 394 (437)
...+...|..++..|+|++|+..|++++.+.|.+. .+++++|.+ +...+++ ++|+..+++++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~l~~~~~~~~~~~A~~~~~~al 108 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA---------------ELYAALATVLYYQASQHMTAQTRAMIDKAL 108 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH---------------HHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH---------------HHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 46788999999999999999999999999988653 678999999 8899999 99999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+++|++..+++.+|.+|..+|++++|+..|+++++++|++.+
T Consensus 109 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 109 ALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCcc
Confidence 999999999999999999999999999999999999999864
No 103
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.35 E-value=1e-12 Score=133.01 Aligned_cols=106 Identities=24% Similarity=0.352 Sum_probs=99.2
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
+.+..+...|+.+++.|+|++|+..|++|++..|.. ..+++++|.+|.++++|++|+.+|++|++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456677889999999999999999999999998764 47799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
++|+++.+++++|.+|..+|++++|++.|++|++++|++.+
T Consensus 69 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~ 109 (477)
T 1wao_1 69 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKD 109 (477)
T ss_dssp SCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTT
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999999999999999999999999999864
No 104
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.35 E-value=5.9e-12 Score=113.35 Aligned_cols=117 Identities=14% Similarity=-0.017 Sum_probs=73.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCC---------h-----------HHH----------HHHHhhhH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFV---------D-----------DEQ----------KLVKSLRV 367 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~---------~-----------~~~----------~~~~~~~~ 367 (437)
+..+...|..+++.|++++|+..|++++++.|.+.... . .+. ..+.....
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 56778899999999999999999999999988753110 0 000 00111123
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+++++|.++..+|++++|+..|+++++++ +++.+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 185 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDL 185 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 345556666666666666666666666666 5566666666666666666666666666666666553
No 105
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.34 E-value=9.2e-12 Score=108.28 Aligned_cols=118 Identities=13% Similarity=0.168 Sum_probs=92.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC------------ChHH-------HHHHHhhhHHHhhhHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------------VDDE-------QKLVKSLRVSCWLNSAACCL 378 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~------------~~~~-------~~~~~~~~~~~~~nla~~~~ 378 (437)
+..+.+.|+.+++.|+|++|+..|++++++.|.+... ..++ ..........++.++|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 5678889999999999999999999999998765321 0000 01112222456777888888
Q ss_pred hccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 379 KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 379 ~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..++++.|+..+.+++.++|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~ 141 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI 141 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhh
Confidence 888888888888888888888889999999999999999999999999999999875
No 106
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.34 E-value=8.4e-12 Score=111.05 Aligned_cols=102 Identities=15% Similarity=0.081 Sum_probs=85.9
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|++++...|.. ..+++++|.+|..+|++++|+.+|++++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL---------------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 4567788888888888888888888888887653 3668888999999999999999999999888
Q ss_pred CCCH----------------HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 398 CHNV----------------KALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 398 p~~~----------------~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
|.+. .+++++|.+|..+|++++|+..|+++++++|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 102 RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 7766 888899999999999999999999999888865
No 107
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.34 E-value=2.6e-12 Score=109.64 Aligned_cols=62 Identities=19% Similarity=0.357 Sum_probs=55.6
Q ss_pred EEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc
Q 013755 215 SYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (437)
Q Consensus 215 ~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~ 277 (437)
+|++++.||++||++ +..+.|+.|.+|.+.+++||+.+|.+|++||+..|.|||+++||+.+
T Consensus 34 ~Y~g~l~dG~vfDss-~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 34 HFTLKLDDGTTAEST-RNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp EEEEEETTSCEEEEH-HHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred EEEEEECCCCEEEec-CCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 566666778888888 66678999999999999999999999999999999999999999754
No 108
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.1e-12 Score=103.80 Aligned_cols=95 Identities=25% Similarity=0.418 Sum_probs=87.4
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++...|.+ ..+++++|.||.++|+|++|+.+|++++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN---------------PVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46778999999999999999999999999998765 367999999999999999999999999999
Q ss_pred CCCC------HHHHHHHHHHHHHhccHHHHHHHHHH
Q 013755 397 DCHN------VKALYRRAQAYMEIADLILAELDIKK 426 (437)
Q Consensus 397 ~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~ 426 (437)
+|++ ..+++++|.++..+|+++.|+..+++
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 9999 99999999999999999988877664
No 109
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.31 E-value=7.5e-12 Score=112.92 Aligned_cols=112 Identities=12% Similarity=0.069 Sum_probs=98.6
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
....+...|..++..|+|++|+..|++++...|.+. ........+++++|.++..+|++++|+.+|++++++
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 75 LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA--------TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH--------HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 456678889999999999999999999999887643 223344578999999999999999999999999999
Q ss_pred CCC--CHHHHHHHHHHHHHhccH---------------------------HHHHHHHHHHHHhCCCCCC
Q 013755 397 DCH--NVKALYRRAQAYMEIADL---------------------------ILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 397 ~p~--~~~a~~~~g~~~~~lg~~---------------------------~~A~~~~~~al~l~P~n~~ 436 (437)
+|+ ++.+++++|.+|..+|+. ++|+.+|+++++++|++++
T Consensus 147 ~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 215 (228)
T 4i17_A 147 TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTE 215 (228)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH
Confidence 999 999999999999999998 9999999999999999863
No 110
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.31 E-value=1.4e-11 Score=109.55 Aligned_cols=102 Identities=21% Similarity=0.197 Sum_probs=93.8
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..++..|..++..|+|++|+..|++++. + . ..+++++|.+|..+|+|++|+.+|+++++
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~--~-~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 65 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQD--P-H---------------SRICFNIGCMYTILKNMTEAEKAFTRSIN 65 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS--C-C---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC--C-C---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566788999999999999999999999851 1 1 36799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++|+++.+++++|.+|..+|++++|+..|++++++.|++.
T Consensus 66 ~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 66 RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred hCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999999999999999999999875
No 111
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.31 E-value=1.1e-11 Score=104.68 Aligned_cols=64 Identities=28% Similarity=0.438 Sum_probs=54.5
Q ss_pred EEEEEEecCccEEeecCCC-------------CCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccc
Q 013755 214 VSYIARLEDGTVFEKKGYD-------------GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAK 279 (437)
Q Consensus 214 v~y~~~~~~g~~fd~~~~~-------------~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~ 279 (437)
++|++++ ||++||++ +. .+.|+.|.+|.+++++||+.+|.+|++||+..|.|||+++||..+..
T Consensus 10 v~Y~g~l-dG~vfDss-~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aYG~~~~~ 86 (157)
T 3pr9_A 10 ISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDPS 86 (157)
T ss_dssp EEEEEEE-TTEEEEES-CHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTTCCCCGG
T ss_pred EEEEEEE-CCEEEEec-cccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhcCCCChH
Confidence 4666777 77777776 43 24799999999999999999999999999999999999999986543
No 112
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.28 E-value=3.6e-11 Score=110.82 Aligned_cols=106 Identities=20% Similarity=0.099 Sum_probs=99.1
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..++..|+|++|+..|++++...|.. ..+++++|.+|..+|++++|+.++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al 104 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM---------------PEVFNYLGIYLTQAGNFDAAYEAFDSVL 104 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3457788999999999999999999999999998764 3679999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+++|.+..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 105 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 105 ELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999999999999999999874
No 113
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.28 E-value=1.4e-11 Score=110.31 Aligned_cols=62 Identities=29% Similarity=0.449 Sum_probs=53.4
Q ss_pred EEEEEEecCccEEeecCCC-------------CCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc
Q 013755 214 VSYIARLEDGTVFEKKGYD-------------GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (437)
Q Consensus 214 v~y~~~~~~g~~fd~~~~~-------------~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~ 277 (437)
+||++++ ||++||++ +. .+.|+.|.+|.+++++||+.+|.+|++||+..|.|||++|||..+
T Consensus 10 v~Y~g~l-dG~vfDss-~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AYGe~~ 84 (231)
T 3prb_A 10 ISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRD 84 (231)
T ss_dssp EEEEEEE-TTEEEEES-CHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTTCCCC
T ss_pred EEEEEEE-CCEEEEec-cchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 4666666 77777776 43 247999999999999999999999999999999999999999865
No 114
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.27 E-value=2.5e-11 Score=111.98 Aligned_cols=108 Identities=18% Similarity=0.160 Sum_probs=98.3
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..++..|..+++.|+|++|+..|++++...|.++. ...+++++|.||+++|+|++|+..|++++++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW------------AADAQFYLARAYYQNKEYLLAASEYERFIQI 81 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc------------hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3678899999999999999999999999999887532 3578999999999999999999999999999
Q ss_pred CCCC---HHHHHHHHHHHHH--------hccHHHHHHHHHHHHHhCCCCCC
Q 013755 397 DCHN---VKALYRRAQAYME--------IADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 397 ~p~~---~~a~~~~g~~~~~--------lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+|++ ..+++++|.++.. +|++++|+..|++++++.|+++.
T Consensus 82 ~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 132 (261)
T 3qky_A 82 YQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL 132 (261)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTT
T ss_pred CCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchh
Confidence 8855 6889999999999 99999999999999999998863
No 115
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.27 E-value=2e-11 Score=110.33 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=96.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..++..|..++..|+|++|+..|++++...|..+. ...+++++|.+|+++|+|++|+..|+++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY------------SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 456888999999999999999999999999886542 24679999999999999999999999999999
Q ss_pred CCCHH---HHHHHHHHHHH------------------hccHHHHHHHHHHHHHhCCCCCC
Q 013755 398 CHNVK---ALYRRAQAYME------------------IADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 398 p~~~~---a~~~~g~~~~~------------------lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
|++.. +++++|.++.. +|++++|+..|+++++..|+++.
T Consensus 72 P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~ 131 (225)
T 2yhc_A 72 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQY 131 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTT
T ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChh
Confidence 99875 89999999986 57999999999999999999863
No 116
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.25 E-value=5.1e-11 Score=108.46 Aligned_cols=105 Identities=28% Similarity=0.356 Sum_probs=97.2
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
.....+...|..++..|+|++|+..|++++...|.+ ..+++++|.++.++|++++|+.+++++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345677889999999999999999999999998764 36799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC------CCCC
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD------PQNR 435 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~------P~n~ 435 (437)
++|+++.+++.+|.+|..+|++++|+..|+++++++ |++.
T Consensus 202 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~ 247 (258)
T 3uq3_A 202 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 247 (258)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred hCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchH
Confidence 999999999999999999999999999999999999 7664
No 117
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.23 E-value=6.2e-11 Score=109.35 Aligned_cols=106 Identities=19% Similarity=0.166 Sum_probs=96.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHh--------ccCHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK--------LKDYQGAIEL 389 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~--------~~~~~~Ai~~ 389 (437)
...+...|..+++.|+|++|+..|++++...|.++. ...+++++|.|++. +|++++|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR------------VPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT------------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch------------hHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 667889999999999999999999999999886543 24779999999999 9999999999
Q ss_pred HHHHHHhCCCCHHHH-----------------HHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 390 CSKVLDCDCHNVKAL-----------------YRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 390 ~~~al~~~p~~~~a~-----------------~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|+++++.+|++..+. +.+|.+|..+|+|++|+..|+++++..|+++
T Consensus 120 ~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 120 FQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 999999999986555 9999999999999999999999999999864
No 118
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.23 E-value=3.5e-12 Score=108.21 Aligned_cols=70 Identities=13% Similarity=-0.066 Sum_probs=67.5
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
..+++++|.+++++|+|++|+..|++++.++|+++.+|+++|.+|..+|+|++|+..|++|++++|++++
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT 105 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH
Confidence 4679999999999999999999999999999999999999999999999999999999999999999874
No 119
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.23 E-value=7.6e-11 Score=118.79 Aligned_cols=106 Identities=28% Similarity=0.336 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
+.+.+..++..|+.+++.|+|++|+..|++++...|+ ..+++++|.||.++|++++|+..|+++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED----------------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc----------------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 4577899999999999999999999999999999763 367999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 394 LDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 394 l~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++++|++..+++.+|.+|..+|++++|+..|++++.++|.+.
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999999999999999999998653
No 120
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.23 E-value=1.3e-10 Score=94.17 Aligned_cols=101 Identities=31% Similarity=0.419 Sum_probs=87.2
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p 398 (437)
..+...|..++..|++++|+..|++++...|.. ..+++++|.++..+|++++|+..+++++...|
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 345667788888888888888888888876543 35688899999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 399 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.+..+++.+|.++..+|++++|+..|++++.++|++
T Consensus 101 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 101 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999998864
No 121
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.23 E-value=1.9e-11 Score=121.04 Aligned_cols=89 Identities=21% Similarity=0.382 Sum_probs=80.2
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCCC
Q 013755 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLP 139 (437)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i~ 139 (437)
..++.||.|+|||+++. ||+.|++++ +.|+.|.+|.|+++|||+++|.||++|++++| .||+..+||..+.
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v--~v~~~~~yg~~~l---- 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTI--DVTFPEEYHAENL---- 226 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEE--EEECCTTCSCTTT----
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEE--EECCchhhCCCCC----
Confidence 67999999999999995 999999987 48999999999999999999999999999999 9999999997653
Q ss_pred CCCcEEEEEEEeceeeee
Q 013755 140 PNSVVQFEVELVSWITVV 157 (437)
Q Consensus 140 ~~~~~~f~v~l~~~~~~~ 157 (437)
++.+++|+|+|.++....
T Consensus 227 ag~~~~F~V~v~~v~~~~ 244 (432)
T 1w26_A 227 KGKAAKFAINLKKVEERE 244 (432)
T ss_dssp SSCEEEEEEECCEECCEE
T ss_pred CCceEEEEEEEEEEeccC
Confidence 678999999999986543
No 122
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.22 E-value=4e-11 Score=121.82 Aligned_cols=113 Identities=23% Similarity=0.308 Sum_probs=99.7
Q ss_pred CCCChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHH
Q 013755 307 WEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGA 386 (437)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A 386 (437)
..++..++...+..+...|+.+++.|+|++|+..|++++...|.+ ..+++++|.||.++|++++|
T Consensus 14 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A 78 (537)
T 3fp2_A 14 KGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNE---------------PVFYSNISACYISTGDLEKV 78 (537)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCC---------------cHHHHHHHHHHHHcCCHHHH
Confidence 446778888999999999999999999999999999999998765 37799999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 387 IELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 387 i~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+..|+++++++|+++.+++.+|.++..+|++++|+..|+ ++.++|++.
T Consensus 79 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~ 126 (537)
T 3fp2_A 79 IEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFD 126 (537)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC------
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCC
Confidence 999999999999999999999999999999999999996 888888754
No 123
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.21 E-value=3.1e-11 Score=96.71 Aligned_cols=85 Identities=9% Similarity=0.008 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Q 013755 336 RAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIA 415 (437)
Q Consensus 336 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg 415 (437)
.|+..|++++...|.+. .+++++|.+|..+|++++|+.+|+++++++|++..+++.+|.+|..+|
T Consensus 3 ~a~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLAQGTDNM---------------LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHTTTCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 58899999999887653 679999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCCC
Q 013755 416 DLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 416 ~~~~A~~~~~~al~l~P~n~ 435 (437)
++++|+..|+++++++|++.
T Consensus 68 ~~~~A~~~~~~al~~~~~~~ 87 (115)
T 2kat_A 68 DRAGARQAWESGLAAAQSRG 87 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhccccc
Confidence 99999999999999988543
No 124
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.20 E-value=1.6e-10 Score=93.61 Aligned_cols=102 Identities=30% Similarity=0.413 Sum_probs=93.6
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p 398 (437)
..+...|..++..|++++|+..|++++...|.. ..+++++|.++...+++++|+..+++++..+|
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 66 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 66 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC
Confidence 356788999999999999999999999986653 35688999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 399 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+..+++.+|.++..+|++++|+..|++++.+.|++.
T Consensus 67 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 103 (136)
T 2fo7_A 67 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 103 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999999999998763
No 125
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.20 E-value=3.5e-11 Score=96.17 Aligned_cols=74 Identities=14% Similarity=0.221 Sum_probs=60.6
Q ss_pred EEEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEc-CCCCCCccccccccccCCCCceEE
Q 013755 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTIN-HEYGFGNVEAKRDLATIPSCAKLY 292 (437)
Q Consensus 214 v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~-~~~~yg~~~~~~~~~~ip~~~~l~ 292 (437)
++|++++ ||++||++ + +.|+.|.+|.+++++||+.+|.+|++||+..|.|+ |.. ||..+. ++++++
T Consensus 38 v~Y~g~~-dG~~fdss-~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~--------~g~~l~ 104 (113)
T 1hxv_A 38 IDFTGIV-DNKKLASA-S--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL--------QSKPVT 104 (113)
T ss_dssp EEEEEEE-TTEECSTT-C--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG--------GSCCCE
T ss_pred EEEEEEE-CCEEcccC-C--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC--------CCCEEE
Confidence 3566666 77788876 3 68999999999999999999999999999999995 333 876442 467899
Q ss_pred EEEEEeee
Q 013755 293 YEVEMMDF 300 (437)
Q Consensus 293 ~~vel~~~ 300 (437)
|+|+|+++
T Consensus 105 F~V~l~~V 112 (113)
T 1hxv_A 105 FEVVLKAI 112 (113)
T ss_dssp EEEEECCB
T ss_pred EEEEEEEE
Confidence 99999876
No 126
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.20 E-value=2.2e-10 Score=98.25 Aligned_cols=62 Identities=19% Similarity=0.412 Sum_probs=54.6
Q ss_pred EEEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc
Q 013755 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (437)
Q Consensus 214 v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~ 277 (437)
++|++++.+|++|+++ +. ..|+.|.+|.+.+++||+.+|.+|++||+..|.|||..+||..+
T Consensus 11 v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 11 LAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp EEEEEEETTSCEEEEC-CS-SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred EEEEEEECCCCEEeec-cC-CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 4666776688889887 44 47999999999999999999999999999999999999999763
No 127
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.20 E-value=1.3e-10 Score=109.57 Aligned_cols=112 Identities=18% Similarity=0.087 Sum_probs=96.8
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhc-cCHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL-KDYQGAIELCSKVL 394 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-~~~~~Ai~~~~~al 394 (437)
..+..+.+.|..+...|+|++|+..|++|+.+.+..... .....++.++|.+|..+ |++++|+.+|++|+
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al 145 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF---------RRGANFKFELGEILENDLHDYAKAIDCYELAG 145 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 346788899999999999999999999999988754321 22356789999999996 99999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 395 DCDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 395 ~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
++.|.+ ..++.++|.+|..+|+|++|+..|++++++.|++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 146 EWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 998754 578999999999999999999999999999998753
No 128
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.20 E-value=5.8e-11 Score=122.55 Aligned_cols=103 Identities=8% Similarity=-0.082 Sum_probs=75.0
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|+|++|+..|++++++.|.+ ..+++++|.+|..+|++++|+.+|+++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 87 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGH---------------PEAVARLGRVRWTQQRHAEAAVLLQQASDAA 87 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 4567778888888888888888888888876654 2456677777777777777777777777777
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|++..+++++|.+|..+|++++|++.|+++++++|++.
T Consensus 88 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 125 (568)
T 2vsy_A 88 PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEP 125 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 77777777777777777777777777777777776653
No 129
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.19 E-value=1.4e-10 Score=99.59 Aligned_cols=102 Identities=19% Similarity=0.069 Sum_probs=78.8
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p 398 (437)
..+...|..++..|++++|+..|++++...|.. ..++.++|.++..+|++++|+.+++++++.+|
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN---------------FNVRFRLGVALDNLGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh---------------HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc
Confidence 344556666666666666666666666665432 35678888888888888888888888888888
Q ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 399 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+..+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 142 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 142 NEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 8888888888888888888888888888888888765
No 130
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.19 E-value=2.5e-10 Score=108.96 Aligned_cols=108 Identities=26% Similarity=0.306 Sum_probs=97.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
.......|..+++.|++++|+..|++++...|.+. .....++.++|.++.++|++++|+..|+++++++
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 302 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKTEPSVA-----------EYTVRSKERICHCFSKDEKPVEAIRICSEVLQME 302 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch-----------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 34456679999999999999999999999987643 2344668899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
|+++.+++.+|.++..+|++++|+..|+++++++|++..
T Consensus 303 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~ 341 (359)
T 3ieg_A 303 PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQ 341 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChH
Confidence 999999999999999999999999999999999998853
No 131
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.19 E-value=1.2e-11 Score=130.73 Aligned_cols=101 Identities=16% Similarity=0.011 Sum_probs=60.4
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|+++++..|.+. .+++++|.+|.++|+|++|+.+|++|++++
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAERVGWRW---------------RLVWYRAVAELLTGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56677778888888888888888888887776643 345555555555555555555555555555
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
|+++.+++++|.+|..+|+|++ +.+|++|++++|++
T Consensus 498 P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~ 533 (681)
T 2pzi_A 498 PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGV 533 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTC
T ss_pred CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCch
Confidence 5555555555555555555555 55555555555544
No 132
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.18 E-value=1e-10 Score=95.84 Aligned_cols=70 Identities=19% Similarity=0.116 Sum_probs=67.2
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+..+.++|.+|+++|+|++|+.+|+++|+++|.++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh
Confidence 3567899999999999999999999999999999999999999999999999999999999999999875
No 133
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.18 E-value=6.1e-11 Score=97.22 Aligned_cols=70 Identities=20% Similarity=0.201 Sum_probs=66.5
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+.++.|+|.+++++|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 3567889999999999999999999999999999999999999999999999999999999999998765
No 134
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.18 E-value=9.9e-11 Score=110.29 Aligned_cols=110 Identities=21% Similarity=0.287 Sum_probs=92.0
Q ss_pred HHHHHHHHhhHHHhC-CcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 317 AAGRKKEEGNLLFKN-GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~-g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
.+..+...|..+... |+|++|+..|++|+.+.|..... .....++.++|.+|.++|+|++|+.+|+++++
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~---------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV---------ALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 356788899999997 99999999999999998754321 12246789999999999999999999999999
Q ss_pred hCCCCHH-------HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 396 CDCHNVK-------ALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 396 ~~p~~~~-------a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+.|++.. +++++|.++..+|++++|+..|+++++++|+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 187 SSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp TTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 9987643 689999999999999999999999999999864
No 135
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.18 E-value=7.1e-11 Score=114.12 Aligned_cols=103 Identities=21% Similarity=0.140 Sum_probs=95.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..+++.|+|++|+..|++++...|.+ ..+++++|.+|.++|++++|+..|+++++++
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 129 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD---------------AEAWQFLGITQAENENEQAAIVALQRCLELQ 129 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 3457788999999999999999999999998764 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 130 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 130 PNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHH
T ss_pred CCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccch
Confidence 99999999999999999999999999999999998754
No 136
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.18 E-value=9e-11 Score=113.39 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=94.3
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|++++...|.+ ..+++++|.+|.++|++++|+.+|+++++++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED---------------YSLWNRLGATLANGDRSEEAVEAYTRALEIQ 277 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 4567788999999999999999999999997764 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
|+++.+++++|.+|..+|++++|+..|+++++++|++
T Consensus 278 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 278 PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999875
No 137
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.17 E-value=3.5e-10 Score=97.11 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=93.6
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|++++|+..|++++...|.. ..++.++|.++..++++++|+..+++++..+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN---------------VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 4567788999999999999999999999987653 3678899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|.+..+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 107 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 144 (186)
T 3as5_A 107 PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEG 144 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccch
Confidence 99999999999999999999999999999999998764
No 138
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.17 E-value=3.6e-11 Score=93.34 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=83.7
Q ss_pred HHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHH-HhhhHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 013755 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVS-CWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 321 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~ 399 (437)
....|..++..|+|++|+..|++++...|.+. . +++++|.+|..+|++++|+.+|+++++++|+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK---------------DEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTH---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 35789999999999999999999999987653 5 7999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 400 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+..++++ +.+.+|+..|++++.++|++..
T Consensus 68 ~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 68 SPALQAR--------KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp STHHHHH--------HHHHHHHHHHCCTTHHHHCCSS
T ss_pred cHHHHHH--------HHHHHHHHHHHHHhccCccccc
Confidence 9998865 7889999999999999998764
No 139
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.17 E-value=2.2e-10 Score=104.16 Aligned_cols=102 Identities=25% Similarity=0.332 Sum_probs=94.6
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..++..|+|++|+..|++++... .+ ..+++++|.+|..+|++++|+.+++++++
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KD---------------ITYLNNRAAAEYEKGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CC---------------THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-cc---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 467889999999999999999999999999987 33 36799999999999999999999999999
Q ss_pred hCCCC-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 396 CDCHN-------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 396 ~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
++|++ +.+++.+|.++..+|++++|+..|++++.++|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 67 QGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 99877 799999999999999999999999999998764
No 140
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.16 E-value=2.5e-10 Score=96.21 Aligned_cols=63 Identities=32% Similarity=0.590 Sum_probs=54.6
Q ss_pred EEEEEEec-CccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCcccc
Q 013755 214 VSYIARLE-DGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (437)
Q Consensus 214 v~y~~~~~-~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~ 278 (437)
+||++++. +|++||++ +. ..|+.|.+|.+.+++||+.+|.+|++|++..|.+||..+||..+.
T Consensus 15 v~Y~g~~~~dG~~fdss-~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 15 IEYEVREQGSSIVLDSN-IS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp EEEEEEESSCSCEEEES-TT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred EEEEEEECCCCCEEEeC-CC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 35666665 78888887 44 479999999999999999999999999999999999999997653
No 141
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.15 E-value=1e-10 Score=118.07 Aligned_cols=102 Identities=18% Similarity=0.053 Sum_probs=96.0
Q ss_pred HHHHHHhhHHHhC---------CcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhc--------c
Q 013755 319 GRKKEEGNLLFKN---------GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL--------K 381 (437)
Q Consensus 319 ~~~~~~g~~~~~~---------g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--------~ 381 (437)
..+...|..++.. |+|++|+..|++|+.+.|.+. .+++++|.+|..+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG---------------RSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHHHHhhccccc
Confidence 5677889999999 999999999999999988753 6799999999999 9
Q ss_pred CHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 382 DYQGAIELCSKVLDCDC---HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 382 ~~~~Ai~~~~~al~~~p---~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++++|+.+|+++++++| +++.+|+++|.+|..+|++++|+..|++|++++|++.
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999 9999999999999999999999999999999999885
No 142
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.15 E-value=3e-10 Score=108.38 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=95.6
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.++.+...|..++..|+|++|+..|++++...|.. ..+++++|.++..+|++++|+..+++++++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 66 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVIAL 66 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 35778999999999999999999999999988764 367999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
+|++..+++.+|.++..+|++++|+..|+++++++|
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 67 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCC
T ss_pred CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999998
No 143
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.15 E-value=2.2e-10 Score=110.30 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=95.2
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|++++...|.. ..+++++|.++..+|++++|+..|+++++++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND---------------YLLWNKLGATLANGNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4567788999999999999999999999997764 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
|++..+++++|.+|..+|++++|+..|+++++++|++
T Consensus 282 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 282 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999877
No 144
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.15 E-value=1.7e-10 Score=106.33 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=74.3
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~ 399 (437)
.+...|..++..|+|++|+..|++++. .+.+... ...++.++|.+|..+|++++|+.+++++++++|.
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~-----------~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~ 106 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKA-----------KSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT 106 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTC-----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhH-----------HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc
Confidence 344556666666666666666666666 3322211 2445778888888888888888888888888888
Q ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 400 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++.+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 107 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 107 RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcH
Confidence 888888888888888888888888888888777653
No 145
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.14 E-value=1.7e-10 Score=100.98 Aligned_cols=62 Identities=19% Similarity=0.412 Sum_probs=54.2
Q ss_pred EEEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc
Q 013755 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (437)
Q Consensus 214 v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~ 277 (437)
++|++++.||++||++ |. ..|+.|.+|.++++|||+.+|.+|++||+..|.|||+.+||+.+
T Consensus 11 v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 11 LAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp EEEEEEETTTEEEEEC-CT-TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred EEEEEEECCCCEEEec-CC-CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 3566666678888887 44 47999999999999999999999999999999999999999764
No 146
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.14 E-value=2.9e-10 Score=102.65 Aligned_cols=100 Identities=18% Similarity=0.141 Sum_probs=69.2
Q ss_pred HHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCC
Q 013755 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHN 400 (437)
Q Consensus 321 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~ 400 (437)
+...|..++..|++++|+..|++++...|.. ..++.++|.++.++|++++|+..++++++.+|++
T Consensus 128 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 192 (243)
T 2q7f_A 128 FYMLGTVLVKLEQPKLALPYLQRAVELNEND---------------TEARFQFGMCLANEGMLDEALSQFAAVTEQDPGH 192 (243)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 3344444455555555555555555444332 3567777888888888888888888888888888
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 401 VKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 401 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 193 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 193 ADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchH
Confidence 88888888888888888888888888888887764
No 147
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.13 E-value=1.4e-10 Score=117.22 Aligned_cols=102 Identities=19% Similarity=0.107 Sum_probs=96.1
Q ss_pred HHHHHHHhhHHHhCCcH-HHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 318 AGRKKEEGNLLFKNGKY-ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..+...|..++..|+| ++|+..|++|+++.|.. ..+++++|.+|.++|++++|+.+|++++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL---------------VEAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 56788899999999999 99999999999998765 367999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHh---------ccHHHHHHHHHHHHHhCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEI---------ADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~l---------g~~~~A~~~~~~al~l~P~n~ 435 (437)
+|+ ..+++++|.+|..+ |++++|+..|++|++++|++.
T Consensus 167 ~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 213 (474)
T 4abn_A 167 CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG 213 (474)
T ss_dssp CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH
Confidence 998 79999999999999 999999999999999999875
No 148
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.13 E-value=6.3e-10 Score=100.37 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=41.2
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.++.++|.++.++|++++|+..++++++.+|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 126 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 192 (243)
T 2q7f_A 126 DLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGH 192 (243)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 3455566666666666666666666666666666666666666666666666666666666665554
No 149
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.13 E-value=3.1e-10 Score=109.35 Aligned_cols=103 Identities=16% Similarity=0.088 Sum_probs=95.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|++++...|.. ..+++++|.+|..+|++++|+.+|+++++++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 128 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH---------------MEAWQYLGTTQAENEQELLAISALRRCLELK 128 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC
Confidence 3456788999999999999999999999987764 3678999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|++..+++.+|.+|..+|++++|+..|++++.++|++.
T Consensus 129 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 129 PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcH
Confidence 99999999999999999999999999999999999875
No 150
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.13 E-value=3.4e-10 Score=97.99 Aligned_cols=101 Identities=15% Similarity=0.154 Sum_probs=73.2
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHH---------------
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQ--------------- 384 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~--------------- 384 (437)
.+...|..++..|++++|+..|++++...|.+. .+++++|.++..+|+++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~ 72 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRG---------------DVKLAKADCLLETKQFELAQELLATIPLEYQD 72 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSH---------------HHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH---------------HHHHHHHHHHHHCCCHHHHHHHHHHhhhccCC
Confidence 456677777888888888888888887777643 23334444444333333
Q ss_pred -------------------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 385 -------------------GAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 385 -------------------~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 73 NSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 345666667777888888999999999999999999999999999988753
No 151
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.12 E-value=9.8e-11 Score=123.65 Aligned_cols=101 Identities=14% Similarity=0.048 Sum_probs=95.5
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p 398 (437)
..+...|..++..|+|++|+..|++|+++.|.+. .+++++|.+|.++|+|++ +.+|++|++++|
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~---------------~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P 531 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLDTFPGEL---------------APKLALAATAELAGNTDE-HKFYQTVWSTND 531 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCS---------------HHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh---------------HHHHHHHHHHHHcCChHH-HHHHHHHHHhCC
Confidence 4667789999999999999999999999998764 679999999999999999 999999999999
Q ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 399 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++..+++++|.+|..+|++++|+++|++|++++|++.
T Consensus 532 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 568 (681)
T 2pzi_A 532 GVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT 568 (681)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH
Confidence 9999999999999999999999999999999999874
No 152
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.12 E-value=3.9e-10 Score=106.47 Aligned_cols=112 Identities=19% Similarity=0.143 Sum_probs=96.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|+|++|+..|++++...+....... ......++.++|.+|.++|++++|+.+++++++++
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 456778899999999999999999999998754221100 00123678999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|++..+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 267 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 304 (330)
T 3hym_B 267 PQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDT 304 (330)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH
T ss_pred ccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCch
Confidence 99999999999999999999999999999999999875
No 153
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.12 E-value=5.8e-11 Score=100.16 Aligned_cols=83 Identities=10% Similarity=-0.002 Sum_probs=75.4
Q ss_pred HHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHH
Q 013755 339 KKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLI 418 (437)
Q Consensus 339 ~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~ 418 (437)
..|++++.+.|.+ ..+++++|.+++..|+|++|+..|++++.++|+++.+++.+|.+|..+|+|+
T Consensus 8 ~~~~~al~~~p~~---------------~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~ 72 (148)
T 2vgx_A 8 GTIAMLNEISSDT---------------LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYD 72 (148)
T ss_dssp CSHHHHTTCCHHH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hhHHHHHcCCHhh---------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHH
Confidence 3477777776653 4678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCC
Q 013755 419 LAELDIKKAIEADPQNRN 436 (437)
Q Consensus 419 ~A~~~~~~al~l~P~n~~ 436 (437)
+|+..|++++.++|+++.
T Consensus 73 ~A~~~~~~al~l~p~~~~ 90 (148)
T 2vgx_A 73 LAIHSYSYGAVMDIXEPR 90 (148)
T ss_dssp HHHHHHHHHHHHSTTCTH
T ss_pred HHHHHHHHHHhcCCCCch
Confidence 999999999999999864
No 154
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.11 E-value=4.1e-10 Score=103.67 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=92.9
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|++++|+..|++++...|... .++.++|.+|..+|++++|+.+++++++++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 138 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL---------------DMYGQIGSYFYNKGNFPLAIQYMEKQIRPT 138 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT---------------HHHHHHHHHHHHTTCHHHHHHHHGGGCCSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHhhcC
Confidence 45578899999999999999999999999987754 679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|.++.+++++|...+..+++++|+..|+++++++|++.
T Consensus 139 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 176 (272)
T 3u4t_A 139 TTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIY 176 (272)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccch
Confidence 99999999999444445699999999999999999874
No 155
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.11 E-value=4.3e-10 Score=105.74 Aligned_cols=102 Identities=13% Similarity=0.032 Sum_probs=87.4
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHH-----------
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGA----------- 386 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A----------- 386 (437)
...+...|..++..|++++|+..|++++...|.+. .+++++|.++..+|++++|
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~---------------~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNG---------------EIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCH---------------HHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcch---------------hHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 45678999999999999999999999999998753 4566667666666666655
Q ss_pred -----------------------HHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 387 -----------------------IELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 387 -----------------------i~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
+..++++++.+|+++.+++++|.+|..+|++++|+..|+++++++|++
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 455666688899999999999999999999999999999999999987
No 156
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.11 E-value=7.2e-10 Score=84.00 Aligned_cols=84 Identities=29% Similarity=0.381 Sum_probs=72.6
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..++|++|+..|++++...|.. ..+++++|.++.+++++++|+.++++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 45677888999999999999999999999887654 356889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhc
Q 013755 397 DCHNVKALYRRAQAYMEIA 415 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg 415 (437)
+|++..+++++|.++..+|
T Consensus 73 ~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CTTCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 9999999999999988764
No 157
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.11 E-value=6.4e-10 Score=110.27 Aligned_cols=106 Identities=26% Similarity=0.309 Sum_probs=96.0
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p 398 (437)
......|..++..|++++|+..|++++...|.+. .....++.++|.++.++|++++|+..|+++++++|
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p 326 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSIA-----------EYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP 326 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcch-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 3445669999999999999999999999887643 22346789999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 399 HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 399 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+++.+++.+|.+|..+|++++|+..|+++++++|+++
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 363 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQ 363 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchH
Confidence 9999999999999999999999999999999999875
No 158
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.10 E-value=1e-09 Score=97.45 Aligned_cols=67 Identities=16% Similarity=0.034 Sum_probs=43.3
Q ss_pred HHhhhHHHHHHhc-cCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 368 SCWLNSAACCLKL-KDYQGAIELCSKVLD--CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 368 ~~~~nla~~~~~~-~~~~~Ai~~~~~al~--~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.++.++|.++..+ |++++|+..++++++ .+|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4556666666666 666666666666666 445556666666666666666666666666666666654
No 159
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.10 E-value=5.2e-10 Score=110.93 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=99.1
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..+++.|+|++|+..|++++...|.+ ..+++++|.+|..+|++++|+..|++++
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al 87 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVI 87 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999987754 4779999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+++|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 88 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 88 QLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred hcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999999999999999999764
No 160
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.10 E-value=1.4e-10 Score=90.79 Aligned_cols=69 Identities=17% Similarity=0.118 Sum_probs=65.5
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..+++++|.+|+++|+|++|+.+|+++++++|+++.+|+++|.+|..+|++++|+..|++++++.|++.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 467999999999999999999999999999999999999999999999999999999999999987654
No 161
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.10 E-value=5e-10 Score=105.53 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=85.0
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC-------------C--hHHHHH------HHhhhHHHhhhHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF-------------V--DDEQKL------VKSLRVSCWLNSAAC 376 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~--~~~~~~------~~~~~~~~~~nla~~ 376 (437)
...+...|..+.+.|++++|+..|++++...|..... . ++.... .......+++++|.+
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~ 209 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAAC 209 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3445556666666666666666666666655432100 0 000000 011124678899999
Q ss_pred HHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHH-HHHHHHHHHHhCCCCC
Q 013755 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLIL-AELDIKKAIEADPQNR 435 (437)
Q Consensus 377 ~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~-A~~~~~~al~l~P~n~ 435 (437)
+.++|+|++|+..++++|+++|+++.+++++|.++..+|++++ |..+++++++++|+++
T Consensus 210 ~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 210 HMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999999999999999999976 5688999999999986
No 162
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.09 E-value=6.1e-10 Score=100.51 Aligned_cols=106 Identities=10% Similarity=0.040 Sum_probs=91.4
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHh------------------
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK------------------ 379 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~------------------ 379 (437)
...+...|..+++.|+|++|+..|+++++..|.+... ..+++++|.++.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~------------~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 108 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI------------DYVMYMRGLTNMALDDSALQGFFGVDRSDRD 108 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH------------HHHHHHHHHHHHHHHC--------------C
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH------------HHHHHHHHHHHHhhhhhhhhhhhccchhhcC
Confidence 4567889999999999999999999999999876521 2467778888775
Q ss_pred ccCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 380 LKDYQGAIELCSKVLDCDCHNVKAL-----------------YRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 380 ~~~~~~Ai~~~~~al~~~p~~~~a~-----------------~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
++++++|+..|+++++.+|++..+. +.+|.+|..+|+|++|+..|+++++..|+++
T Consensus 109 ~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 6799999999999999999987554 6789999999999999999999999999874
No 163
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.09 E-value=7.4e-10 Score=104.13 Aligned_cols=108 Identities=14% Similarity=0.125 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..++..|+|++|+..|++|+......+.. ......+++|+|.+|.++|+|++|+.+++++++
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc--------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 346678999999999999999999999999876543221 234567899999999999999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhC
Q 013755 396 CDCHN------VKALYRRAQAYMEIA-DLILAELDIKKAIEAD 431 (437)
Q Consensus 396 ~~p~~------~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~ 431 (437)
+.+.. ..+|+++|.+|..+| .+++|+.+|++|+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 225 ISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 86544 789999999999999 5799999999999874
No 164
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.07 E-value=1.2e-09 Score=103.04 Aligned_cols=105 Identities=13% Similarity=0.067 Sum_probs=96.9
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
....+...|..++..|+|++|+..|++++...|.. ..++.++|.++..+|++++|+.++++++++
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 84 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPER---------------EEAWRSLGLTQAENEKDGLAIIALNHARML 84 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 34557889999999999999999999999987754 367889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+|++..+++.+|.++..+|++++|+..|+++++++|++..
T Consensus 85 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 124 (327)
T 3cv0_A 85 DPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 124 (327)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTT
T ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHH
Confidence 9999999999999999999999999999999999998754
No 165
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.07 E-value=1.1e-09 Score=112.96 Aligned_cols=103 Identities=9% Similarity=-0.014 Sum_probs=96.9
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|+|++|+..|+++++..|.+ ..+++++|.+|.++|++++|+.+++++++++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEH---------------PGIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 5567889999999999999999999999998765 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEI---ADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~l---g~~~~A~~~~~~al~l~P~n~ 435 (437)
|++..+++++|.++..+ |++++|++.|+++++++|++.
T Consensus 122 p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 162 (568)
T 2vsy_A 122 PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAV 162 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999 999999999999999999874
No 166
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.07 E-value=6.2e-10 Score=108.51 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=83.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC-------------ChHHH------HHHHhhhHHHhhhHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF-------------VDDEQ------KLVKSLRVSCWLNSAACCL 378 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~~~~------~~~~~~~~~~~~nla~~~~ 378 (437)
+..+...|..+++.|++++|+..|++++...|..... .++.. .........++.++|.++.
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 146 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLK 146 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 4567788888888888999998888888887654210 00000 0111112345667777888
Q ss_pred hccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 379 KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 379 ~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+|++++|+..|+++++.+|++..+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 147 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 203 (388)
T 1w3b_A 147 ALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 203 (388)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 888888888888888888888888888888888888888888888888888887764
No 167
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.07 E-value=1e-10 Score=98.54 Aligned_cols=64 Identities=33% Similarity=0.584 Sum_probs=54.1
Q ss_pred EEEEEecCccEEeecCCC-------------CCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccc
Q 013755 215 SYIARLEDGTVFEKKGYD-------------GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAK 279 (437)
Q Consensus 215 ~y~~~~~~g~~fd~~~~~-------------~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~ 279 (437)
||++++.||++||++ +. ...|+.|.+|.+.+++||+.+|.+|++||+..|.+||+.+||..+..
T Consensus 11 ~Y~g~~~dG~~fdss-~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aYG~~~~~ 87 (151)
T 1ix5_A 11 DYIGKLESGDVFDTS-IEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNEM 87 (151)
T ss_dssp CCEECCTTSCCCEES-CHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSSCSCCST
T ss_pred EEEEEECCCCEEEec-chhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHCCCCCcc
Confidence 556666677777777 42 34799999999999999999999999999999999999999976543
No 168
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.06 E-value=7.6e-10 Score=104.30 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=84.4
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCC-------------CChHHHHHHHhhh----HHHhhhHHHHHH--
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS-------------FVDDEQKLVKSLR----VSCWLNSAACCL-- 378 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~-------------~~~~~~~~~~~~~----~~~~~nla~~~~-- 378 (437)
...+...|..+...|++++|+..|++ |.+.. -.++....+.... .....+++.++.
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l 175 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSL 175 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH
Confidence 45688999999999999999999887 21110 0011111111111 112334444433
Q ss_pred --hccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 379 --KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 379 --~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
..|++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+|++
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~ 235 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPE 235 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 3488999999999999999999999999999999999999999999999999999864
No 169
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.06 E-value=1.1e-09 Score=99.77 Aligned_cols=68 Identities=16% Similarity=0.088 Sum_probs=50.6
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
..+++++|.++.++|++++|+.+++++++.+|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 141 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 208 (252)
T 2ho1_A 141 SRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQN 208 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc
Confidence 35567777777777777777777777777777777777777777777777777777777777777655
No 170
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.06 E-value=1.1e-10 Score=100.76 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=85.5
Q ss_pred HHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHH
Q 013755 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK 402 (437)
Q Consensus 323 ~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~ 402 (437)
..+..++..|+|++|+..|++++...|.+ ..+++++|.+|..+|++++|+.+|+++++++|+++.
T Consensus 15 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 79 (177)
T 2e2e_A 15 DPLHQFASQQNPEAQLQALQDKIRANPQN---------------SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAE 79 (177)
T ss_dssp TTTCCCC-----CCCCHHHHHHHHHCCSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHH
T ss_pred hhhhhhhhccCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 44566788999999999999999998765 367999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHHhccH--HHHHHHHHHHHHhCCCCC
Q 013755 403 ALYRRAQA-YMEIADL--ILAELDIKKAIEADPQNR 435 (437)
Q Consensus 403 a~~~~g~~-~~~lg~~--~~A~~~~~~al~l~P~n~ 435 (437)
+++.+|.+ +...|++ ++|+..|+++++++|++.
T Consensus 80 ~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~ 115 (177)
T 2e2e_A 80 LYAALATVLYYQASQHMTAQTRAMIDKALALDSNEI 115 (177)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcH
Confidence 99999999 8899999 999999999999999874
No 171
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.06 E-value=1.2e-09 Score=91.39 Aligned_cols=108 Identities=17% Similarity=0.100 Sum_probs=74.5
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..++..|+|++|+..|++++.+.+.... ......++.++|.+|..+|++++|+.++++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC---------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455677778888888888888888888888887654321 12234566777777777777777777777777
Q ss_pred HhCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 395 DCDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 395 ~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
++.+.. ..+++++|.++..+|++++|+..+++++++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 664432 4567777777777777777777777777653
No 172
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.06 E-value=6.6e-10 Score=87.52 Aligned_cols=68 Identities=10% Similarity=0.107 Sum_probs=65.8
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
..+++++|.+++.+|+|++|+..|+++++++|+++.+++++|.+|..+|++++|+..|+++++++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 46689999999999999999999999999999999999999999999999999999999999999987
No 173
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.06 E-value=9.9e-10 Score=107.03 Aligned_cols=67 Identities=19% Similarity=0.078 Sum_probs=42.9
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.++.++|.+|.++|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc
Confidence 4555666666666666666666666666666666666666666666666666666666666666654
No 174
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.06 E-value=9.6e-11 Score=114.48 Aligned_cols=91 Identities=22% Similarity=0.469 Sum_probs=76.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCCC
Q 013755 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLP 139 (437)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i~ 139 (437)
+.++.||.|+|||+++. ||+.|+++. +.|+.|.+|.|++||||+++|.||++|++++|++.+|. .||..+ .
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~--dy~~~~----l 229 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPE--DYHAEN----L 229 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCT--TCSCTT----T
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCcc--ccccCC----C
Confidence 57999999999999995 999999984 37899999999999999999999999999999444454 466543 2
Q ss_pred CCCcEEEEEEEeceeeeecc
Q 013755 140 PNSVVQFEVELVSWITVVDL 159 (437)
Q Consensus 140 ~~~~~~f~v~l~~~~~~~d~ 159 (437)
++.++.|+|+|.++....-+
T Consensus 230 aGk~~~F~V~v~~i~~~~lp 249 (392)
T 1t11_A 230 KGKAAKFAIKVNKVEARELP 249 (392)
T ss_dssp SSCEEEECCCEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEEcCCCC
Confidence 67899999999998754433
No 175
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.05 E-value=1.7e-09 Score=98.36 Aligned_cols=103 Identities=15% Similarity=0.017 Sum_probs=88.9
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|++++|+..|++++...|.. ..++.++|.++..+|++++|+..++++++.+
T Consensus 141 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 205 (252)
T 2ho1_A 141 SRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ---------------PSVALEMADLLYKEREYVPARQYYDLFAQGG 205 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3455666777777777777777777777765543 3678999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|.+..+++.++.++..+|++++|+..+++++++.|+++
T Consensus 206 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 243 (252)
T 2ho1_A 206 GQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSL 243 (252)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSH
T ss_pred cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999875
No 176
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.05 E-value=1.6e-09 Score=96.27 Aligned_cols=102 Identities=17% Similarity=0.056 Sum_probs=77.6
Q ss_pred HHHHhhHHHhC-CcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 013755 321 KKEEGNLLFKN-GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 321 ~~~~g~~~~~~-g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~ 399 (437)
+...|..++.. |++++|+..|++++. .+..+ ....+++++|.++..+|++++|+..++++++.+|.
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 145 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKALA-DPTYP------------TPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ 145 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHT-STTCS------------CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHc-CcCCc------------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34444555555 555555555555554 11111 12467889999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CCC
Q 013755 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADP-QNR 435 (437)
Q Consensus 400 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P-~n~ 435 (437)
+..+++.+|.++..+|++++|+..|+++++++| ++.
T Consensus 146 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 182 (225)
T 2vq2_A 146 FPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQA 182 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCH
T ss_pred CchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCH
Confidence 999999999999999999999999999999988 653
No 177
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.05 E-value=9.2e-10 Score=104.37 Aligned_cols=109 Identities=14% Similarity=0.076 Sum_probs=90.0
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..+.. |+|++|+.+|++|+.+.+.... ......++.|+|.+|.++|+|++|+.+|+++++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKS 183 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345677788888888 8899999999999888765321 123457899999999999999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 396 CDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 396 ~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+.|.+ ..+++.+|.++..+|++++|+..|++++ ++|+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 184 MYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 87654 3578899999999999999999999999 999764
No 178
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.04 E-value=1.7e-09 Score=105.42 Aligned_cols=110 Identities=14% Similarity=-0.011 Sum_probs=98.0
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..++..|+|++|+..|++|+.+.+.... ......+++|+|.+|..+|++++|+.+++++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 56778889999999999999999999999998764322 124567899999999999999999999999999
Q ss_pred -----hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 396 -----CDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 396 -----~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.+|....+++++|.+|..+|++++|+..+++++++.+..
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred HHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 788889999999999999999999999999999997653
No 179
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.04 E-value=2.7e-09 Score=98.14 Aligned_cols=69 Identities=12% Similarity=-0.001 Sum_probs=61.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|+|++|+..|++++...|... .+++++|.+|.++|++++|+..++++++++
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN---------------YAHLNRGIALYYGGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcccc---------------HHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 45678899999999999999999999999987653 678999999999999999999999999999
Q ss_pred CCCH
Q 013755 398 CHNV 401 (437)
Q Consensus 398 p~~~ 401 (437)
|++.
T Consensus 142 ~~~~ 145 (275)
T 1xnf_A 142 PNDP 145 (275)
T ss_dssp TTCH
T ss_pred CCCh
Confidence 8875
No 180
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.04 E-value=1.6e-09 Score=102.11 Aligned_cols=102 Identities=21% Similarity=0.270 Sum_probs=94.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|++++|+..|++++...|.. ..++.++|.++..+|++++|+..++++++.+
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD---------------AQLWNKLGATLANGNRPQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4567788999999999999999999999997754 3678999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
|++..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 273 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGG 273 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999983
No 181
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.04 E-value=2.3e-09 Score=90.62 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=87.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|+|++|+..|++++...|.. ..+++++|.++..+|++++|+.+++++++++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 111 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVKVK 111 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 4567889999999999999999999999998764 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHH--HHHHhccHHHHHHHHHHHHHhC
Q 013755 398 CHNVKALYRRAQ--AYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 398 p~~~~a~~~~g~--~~~~lg~~~~A~~~~~~al~l~ 431 (437)
|.+..++..++. .+..+|++++|+..+.++..+.
T Consensus 112 p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 112 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 999988855544 4889999999999999987653
No 182
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.03 E-value=2.5e-09 Score=89.35 Aligned_cols=110 Identities=18% Similarity=0.167 Sum_probs=93.5
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..++..|+|++|+..|++++.+.+.... ......+++++|.++..+|++++|+.+++++++
T Consensus 47 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 47 AERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34567888999999999999999999999998865432 123467799999999999999999999999998
Q ss_pred hCCC------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 396 CDCH------NVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 396 ~~p~------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
+.+. ...+++.+|.++..+|++++|+..+++++++....
T Consensus 118 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 118 IAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 162 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 7432 25789999999999999999999999999986654
No 183
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.02 E-value=3e-10 Score=94.67 Aligned_cols=70 Identities=6% Similarity=-0.065 Sum_probs=66.9
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
...++++|.++++.|+|++|+..|++++.++|+++.+|+.+|.+|..+|+|++|+..|++++.++|+++.
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPR 87 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH
Confidence 4668899999999999999999999999999999999999999999999999999999999999999863
No 184
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.02 E-value=1.1e-09 Score=106.97 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
....+..+...|..+...|+|++|+..|++|+.+.+.... ......+++|+|.+|..+|++++|+.+++++
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~a 250 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3455678889999999999999999999999999876432 1334678999999999999999999999999
Q ss_pred HH-----hC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 394 LD-----CD-CHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 394 l~-----~~-p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
++ .+ |....+++++|.+|..+|++++|+..|++++++.+
T Consensus 251 l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 251 IAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99 46 78899999999999999999999999999998854
No 185
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.02 E-value=6.5e-10 Score=105.42 Aligned_cols=110 Identities=13% Similarity=0.050 Sum_probs=92.1
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+.+.|..+...|+|++|+..|++|+.+.+..... .....++.|+|.+|.. |++++|+.+|++|++
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP---------DTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH---------HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 446677788888888899999999999999887543321 2235788999999999 999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 396 CDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 396 ~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+.|.. ..+++++|.+|..+|+|++|+..|++++++.|++.
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 87654 57899999999999999999999999999877553
No 186
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.01 E-value=2.2e-09 Score=101.28 Aligned_cols=100 Identities=16% Similarity=0.083 Sum_probs=52.4
Q ss_pred HHHHHHhhHHHhCC-cHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 319 GRKKEEGNLLFKNG-KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 319 ~~~~~~g~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
..+...|..++..| ++++|+..|++++...|... .++.++|.++..+|++++|+..++++++++
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 155 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYG---------------PAWIAYGHSFAVESEHDQAMAAYFTAAQLM 155 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCT---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHhc
Confidence 34556667777777 77777777777776655432 234444444444444444444444444444
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
|++..+++.+|.+|..+|++++|+..|+++++++|+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 191 (330)
T 3hym_B 156 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPE 191 (330)
T ss_dssp TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC
Confidence 444444444444444444444444444444444443
No 187
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.00 E-value=1.3e-09 Score=92.31 Aligned_cols=57 Identities=18% Similarity=0.381 Sum_probs=51.3
Q ss_pred EEEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccc
Q 013755 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (437)
Q Consensus 214 v~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~ 277 (437)
++|+++ .||++||++ + +.|.+|.+++++||+.+|.+|++||+..|.+||..+||..+
T Consensus 11 v~Y~g~-~dG~~fdss-~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 11 IRYTLQ-VEGEVLDQG-E-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp EEEEEE-ETTEEEEEE-E-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred EEEEEE-ECCEEEEee-E-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 466667 688889988 3 99999999999999999999999999999999999999764
No 188
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.00 E-value=1.8e-09 Score=87.60 Aligned_cols=69 Identities=19% Similarity=0.187 Sum_probs=66.4
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
...+.++|.++++.|+|++|+..|+++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 72 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV 72 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 466899999999999999999999999999999999999999999999999999999999999999875
No 189
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.99 E-value=2.4e-09 Score=81.05 Aligned_cols=69 Identities=35% Similarity=0.458 Sum_probs=66.3
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..+++++|.++..+++|++|+.+|+++++++|++..+++++|.++..+|++++|+..|+++++++|++.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 467899999999999999999999999999999999999999999999999999999999999999875
No 190
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.99 E-value=2.5e-09 Score=100.44 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=90.1
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++|+.+....+.. ......+++|+|.+|.++|+|++|+.++++++++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46788899999999999999999999999775443321 1122368999999999999999999999999988
Q ss_pred CCC------CHHHHHHHHHHHHHhccHHHH-HHHHHHHHHhC
Q 013755 397 DCH------NVKALYRRAQAYMEIADLILA-ELDIKKAIEAD 431 (437)
Q Consensus 397 ~p~------~~~a~~~~g~~~~~lg~~~~A-~~~~~~al~l~ 431 (437)
.+. ...+++++|.+|..+|++++| ..+|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 643 278899999999999999999 78899999764
No 191
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.99 E-value=2.7e-09 Score=106.60 Aligned_cols=113 Identities=16% Similarity=0.093 Sum_probs=89.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|++|+++.+..... ........+|.|+|.+|..+|++++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~ 124 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVC 124 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 4567789999999999999999999999986532110 0001124668899999999999999999999999863
Q ss_pred --------CCCHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHhCCCCCC
Q 013755 398 --------CHNVKALYRRAQAYMEIA--DLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 398 --------p~~~~a~~~~g~~~~~lg--~~~~A~~~~~~al~l~P~n~~ 436 (437)
+..+.++..+|.++..++ +|++|+.+|++|++++|+|++
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~ 173 (472)
T 4g1t_A 125 EKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPE 173 (472)
T ss_dssp HHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHH
T ss_pred HhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHH
Confidence 355788899998887664 799999999999999998864
No 192
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.97 E-value=2.3e-09 Score=82.94 Aligned_cols=67 Identities=21% Similarity=0.256 Sum_probs=64.1
Q ss_pred hhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 370 WLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK-ALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 370 ~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~-a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
.+++|.+++++++|++|+..|+++++.+|+++. +++++|.+|..+|++++|+..|+++++++|++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 70 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPA 70 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH
Confidence 468999999999999999999999999999999 9999999999999999999999999999999863
No 193
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.95 E-value=4e-09 Score=106.88 Aligned_cols=103 Identities=13% Similarity=0.031 Sum_probs=80.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|+|++|+..|++++...|... .++.++|.++..+|++++|+..++++++.+
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 374 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENV---------------YPYIQLACLLYKQGKFTESEAFFNETKLKF 374 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCS---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34566677777777777777777777777766543 557788888888888888888888888888
Q ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
|+++.+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 375 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 375 PTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 88888888888888888888888888888888877654
No 194
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.94 E-value=3e-09 Score=99.95 Aligned_cols=108 Identities=16% Similarity=0.045 Sum_probs=89.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh-
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC- 396 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~- 396 (437)
...+...|..++..++|++|+..|++|+.+....... .....+++++|.+|..+|+|++|+.+|+++++.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4455668999999999999999999999975543322 123467999999999999999999999999953
Q ss_pred ------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 397 ------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 397 ------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.+....+++++|.+|..+|+|++|+.++++|+++.+..
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 22335789999999999999999999999999987544
No 195
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.94 E-value=6.6e-10 Score=112.25 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=89.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..+++.|+|++|+..|++|+++.|.. ..+++++|.+|.++|++++|+.+++++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 5677889999999999999999999999997764 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHH--HHHhccHHHHHHHHH-----------HHHHhCCCCC
Q 013755 398 CHNVKALYRRAQA--YMEIADLILAELDIK-----------KAIEADPQNR 435 (437)
Q Consensus 398 p~~~~a~~~~g~~--~~~lg~~~~A~~~~~-----------~al~l~P~n~ 435 (437)
|++..+++.++.+ +..+|++++|++.++ +++.++|+..
T Consensus 105 p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 105 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS 155 (477)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccc
Confidence 9999999999999 889999999999999 8888887654
No 196
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.93 E-value=4e-09 Score=85.44 Aligned_cols=69 Identities=17% Similarity=0.060 Sum_probs=65.5
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
..++++|.++++.|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++.+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~ 86 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIA 86 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 347889999999999999999999999999999999999999999999999999999999999998753
No 197
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.93 E-value=5.6e-09 Score=95.91 Aligned_cols=108 Identities=19% Similarity=0.094 Sum_probs=92.9
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..++..|+|++|+..|++++.+.......+ ......++.++|.+|..+|++++|+.++++++.
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 113 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 113 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4577888999999999999999999999999863210000 123467899999999999999999999999999
Q ss_pred h--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 396 C--------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 396 ~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+ +|....+++++|.+|..+|++++|+..|++++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 114 IREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 8 5777899999999999999999999999999998
No 198
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.92 E-value=4.2e-09 Score=105.93 Aligned_cols=107 Identities=14% Similarity=0.123 Sum_probs=90.2
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHh---ccCHHHHHHHHHHHHHh
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK---LKDYQGAIELCSKVLDC 396 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~---~~~~~~Ai~~~~~al~~ 396 (437)
.+...|..++..|++++|+..|++++...|...... ....+++++|.++.. +|++++|+..+++++++
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~ 444 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIY---------VGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL 444 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCS---------SCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHH---------HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh
Confidence 455667777777777777777777777776654210 012379999999999 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|++..+++.+|.+|..+|++++|+..|+++++++|+++
T Consensus 445 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 483 (514)
T 2gw1_A 445 DPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTME 483 (514)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHH
T ss_pred CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccH
Confidence 999999999999999999999999999999999999875
No 199
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.92 E-value=1.1e-08 Score=105.21 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=83.9
Q ss_pred HHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCC
Q 013755 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHN 400 (437)
Q Consensus 321 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~ 400 (437)
+...|..+++.|++++|+..|++++...|...... .....++.++|.+|.+.|++++|+..++++++++|++
T Consensus 478 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p--------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~ 549 (597)
T 2xpi_A 478 LNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNE--------KPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTND 549 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCS--------GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccch--------hhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 44455555555555555555555555543211000 0014689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 401 VKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 401 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+.+++.+|.+|..+|++++|+..|+++++++|++++
T Consensus 550 ~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 585 (597)
T 2xpi_A 550 ANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIM 585 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChH
Confidence 999999999999999999999999999999999853
No 200
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.91 E-value=3.2e-09 Score=89.70 Aligned_cols=69 Identities=16% Similarity=0.128 Sum_probs=64.2
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHhccHHHHHHHHHHHHHh----
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH-------NVK-----ALYRRAQAYMEIADLILAELDIKKAIEA---- 430 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-------~~~-----a~~~~g~~~~~lg~~~~A~~~~~~al~l---- 430 (437)
+..+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456889999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ---CCCCC
Q 013755 431 ---DPQNR 435 (437)
Q Consensus 431 ---~P~n~ 435 (437)
+|++.
T Consensus 91 ~e~~pd~~ 98 (159)
T 2hr2_A 91 GELNQDEG 98 (159)
T ss_dssp CCTTSTHH
T ss_pred ccCCCchH
Confidence 99864
No 201
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.91 E-value=2e-08 Score=94.19 Aligned_cols=107 Identities=16% Similarity=0.032 Sum_probs=87.6
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH--
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL-- 394 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al-- 394 (437)
....+...|..+...|+|++|+..|++|+...+..... .....+++++|.+|..+|+|++|+.+|++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~ 184 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34445667888888889999999999998876543221 1135689999999999999999999999999
Q ss_pred -HhCCCCH----HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 395 -DCDCHNV----KALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 395 -~~~p~~~----~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
+..|++. .+++++|.+|..+|+|++|+..|++++++.+
T Consensus 185 ~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 185 LEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5566543 6999999999999999999999999998864
No 202
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.91 E-value=6.3e-09 Score=91.13 Aligned_cols=106 Identities=11% Similarity=0.092 Sum_probs=83.5
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++.+...... ......+++++|.+|..+|++++|+.++++++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999997654321 1234567888888888888888888888888887
Q ss_pred ---CCC----CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 397 ---DCH----NVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 397 ---~p~----~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
.++ ...+++++|.++..+|++++|+..+++++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 332 24668888888888888888888888888764
No 203
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.91 E-value=1e-08 Score=99.92 Aligned_cols=109 Identities=18% Similarity=0.099 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
....+..+...|..++..|++++|+..|++|+.+.+..... ......+++++|.+|..+|+|++|+.+++++
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAISHFQKA 210 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34567888899999999999999999999999988765431 1234678999999999999999999999999
Q ss_pred HHhCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 394 LDCDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 394 l~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+++.+.. ..+++++|.+|..+|++++|+.+|++|+++
T Consensus 211 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 211 YSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9886543 368999999999999999999999999995
No 204
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.91 E-value=5.5e-09 Score=89.00 Aligned_cols=70 Identities=24% Similarity=0.230 Sum_probs=67.0
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
....++++|.++++.++|++|+.+|+++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 79 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYS 79 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 3567899999999999999999999999999999999999999999999999999999999999999874
No 205
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.89 E-value=9.8e-09 Score=94.24 Aligned_cols=111 Identities=17% Similarity=0.070 Sum_probs=94.2
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..++..|+|++|+..|++++.+........ ......++.++|.+|..+|++++|+.++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567788999999999999999999999999853210000 02245789999999999999999999999999
Q ss_pred Hh--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 395 DC--------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 395 ~~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
++ +|....+++.+|.+|..+|++++|+..|++++++.|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 99 777789999999999999999999999999998743
No 206
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.88 E-value=7e-09 Score=91.30 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=82.4
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
....+...|..++..|+|++|+..|++++.+.|.. ..+++++|.+|..+++|++|+.+|++++++
T Consensus 87 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 87 EISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN---------------VKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 35778899999999999999999999999997764 367999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccHHHHH-HHHHHHHH
Q 013755 397 DCHNVKALYRRAQAYMEIADLILAE-LDIKKAIE 429 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~~~~A~-~~~~~al~ 429 (437)
+|++..++..++.++..++++.++. ..|++.+.
T Consensus 152 ~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 152 NPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999888 45555543
No 207
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.87 E-value=6.4e-09 Score=97.18 Aligned_cols=111 Identities=20% Similarity=0.156 Sum_probs=92.8
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..++..|++++|+..|++++.......... ......++.++|.+|..+|++++|+.+++++++
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD-------DPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT-------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4456678899999999999999999999999854321110 022357789999999999999999999999997
Q ss_pred h-------------------------------------------------CCCCHHHHHHHHHHHHHhccHHHHHHHHHH
Q 013755 396 C-------------------------------------------------DCHNVKALYRRAQAYMEIADLILAELDIKK 426 (437)
Q Consensus 396 ~-------------------------------------------------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~ 426 (437)
+ +|.+..+++.+|.+|..+|++++|+..|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 303 (311)
T 3nf1_A 224 RAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEA 303 (311)
T ss_dssp HHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 4 466678899999999999999999999999
Q ss_pred HHHhCCC
Q 013755 427 AIEADPQ 433 (437)
Q Consensus 427 al~l~P~ 433 (437)
++++.|+
T Consensus 304 al~l~~~ 310 (311)
T 3nf1_A 304 AMRSRKQ 310 (311)
T ss_dssp HHHHHC-
T ss_pred HHHHhhc
Confidence 9999875
No 208
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.87 E-value=7e-09 Score=97.50 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=93.8
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++...|.+. .....++.++|.+|..+|++++|+.++++++++
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 72 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccH-----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 356778899999999999999999999999866542 234578999999999999999999999999987
Q ss_pred ------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 397 ------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 397 ------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.|....+++.+|.+|..+|++++|+..|++++++.|..
T Consensus 73 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 73 ARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 45567899999999999999999999999999986644
No 209
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.86 E-value=1.1e-08 Score=100.15 Aligned_cols=106 Identities=13% Similarity=0.079 Sum_probs=95.2
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..++..|+|++|+..|++++...|.+. .....+++++|.+|..+|++++|+.++++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL-----------RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh-----------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46678888999999999999999999999999976542 2345689999999999999999999999999
Q ss_pred Hh------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 395 DC------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 395 ~~------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
++ +|....+++.+|.+|..+|++++|+..|++++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 98 57778999999999999999999999999999874
No 210
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.85 E-value=2.2e-08 Score=100.94 Aligned_cols=111 Identities=14% Similarity=0.036 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHH
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSK 392 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~ 392 (437)
+.++.+....+.+..+..+|+|++|+..|+++|.+.......+ ....+.++.|||.+|..+|+|++|+.+|++
T Consensus 304 ~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~ 376 (490)
T 3n71_A 304 EMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYARR 376 (490)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4556677778888889999999999999999999865422111 123467899999999999999999999999
Q ss_pred HHHh-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 393 VLDC-----DCHN---VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 393 al~~-----~p~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+|++ -|++ ...++++|.+|..+|+|++|+..|++|+++
T Consensus 377 aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 377 MVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9976 3444 577999999999999999999999999975
No 211
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.84 E-value=1.5e-08 Score=81.43 Aligned_cols=85 Identities=15% Similarity=0.038 Sum_probs=78.2
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|++++|+..|.+++...|.+ ..+++++|.++..++++++|+.+++++++++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY---------------SKAYGRMGLALSSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 4567889999999999999999999999987754 3678999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccH
Q 013755 398 CHNVKALYRRAQAYMEIADL 417 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~ 417 (437)
|++..+++.+|.++..+|++
T Consensus 111 p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 111 PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp TTCHHHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHHHhcC
Confidence 99999999999999999875
No 212
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.83 E-value=7.1e-09 Score=100.77 Aligned_cols=106 Identities=16% Similarity=0.122 Sum_probs=93.4
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh-
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC- 396 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~- 396 (437)
+..+...|..++..|+|++|+..|++++...|.+. .....+++++|.+|..+|++++|+.++++++.+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccH-----------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999976542 234578999999999999999999999999987
Q ss_pred -----CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 397 -----DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 397 -----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.|....+++.+|.+|..+|++++|+..|++++++.|..
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 44557899999999999999999999999999987643
No 213
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.81 E-value=1.9e-08 Score=82.24 Aligned_cols=69 Identities=16% Similarity=0.123 Sum_probs=66.5
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
...++++|.+++.+++|++|+..|++++.++|+++.+++++|.++..+|++++|+..|+++++++|++.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 577899999999999999999999999999999999999999999999999999999999999999874
No 214
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.81 E-value=1.7e-08 Score=81.67 Aligned_cols=84 Identities=19% Similarity=0.148 Sum_probs=77.2
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|++++|+..|++++...|.. ..+++++|.++.+++++++|+.+++++++++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF---------------IKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 4667889999999999999999999999997764 3679999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcc
Q 013755 398 CHNVKALYRRAQAYMEIAD 416 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~ 416 (437)
|.+..+++.++.++..+|+
T Consensus 115 p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 115 SSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp GGGTHHHHHHHHHHHHHTC
T ss_pred CCchHHHHHHHHHHHHhcC
Confidence 9999999999999998774
No 215
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.81 E-value=2e-08 Score=78.42 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=64.3
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
.+++++|.++..++++++|+.+++++++++|.+..+++.+|.++..+|++++|+..|+++++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 568999999999999999999999999999999999999999999999999999999999999998
No 216
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.79 E-value=3.2e-08 Score=96.30 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..++..|+++.|+..|++|+.+.+..... ......+++++|.+|..+|+|++|+.++++|+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4567778888888899999999999999998887754432 12346789999999999999999999999999
Q ss_pred HhCCC------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 395 DCDCH------NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 395 ~~~p~------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
++.+. ...+++++|.+|..+|++++|+..|++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 210 ELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKV 251 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 87431 2478999999999999999999999999984
No 217
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.79 E-value=2e-08 Score=97.50 Aligned_cols=109 Identities=16% Similarity=0.092 Sum_probs=79.8
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+...|..++..|+|++|+..|++++.+.+..... .....++.++|.+|..+|++++|+.++++++.
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 255 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK---------AAERRAYSNLGNAYIFLGEFETASEYYKKTLL 255 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 345567888999999999999999999999987764321 12345677777777777777777777777777
Q ss_pred hCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 396 CDCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 396 ~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
+.|.. ..+++.+|.+|..+|++++|+..|++++++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 256 LARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 66554 566777777777777777777777777766443
No 218
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.78 E-value=2.3e-08 Score=80.12 Aligned_cols=78 Identities=14% Similarity=0.126 Sum_probs=69.9
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
......+...|..++..|+|++|+..|+++++..|.+. .+++++|.|+.++|++++|+..+++++
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al 88 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ---------------ALRVFYAMVLYNLGRYEQGVELLLKII 88 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch---------------HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35678889999999999999999999999999988753 679999999999999999999999999
Q ss_pred HhCCCCHHHHHHH
Q 013755 395 DCDCHNVKALYRR 407 (437)
Q Consensus 395 ~~~p~~~~a~~~~ 407 (437)
+.+|+++......
T Consensus 89 ~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 89 AETSDDETIQSYK 101 (117)
T ss_dssp HHHCCCHHHHHTH
T ss_pred HhCCCcHHHHHHH
Confidence 9999998765433
No 219
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.78 E-value=4.5e-08 Score=97.15 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=86.2
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+....+.+......|+|++|+..|+++|.+....-..+ ....+..+.|||.+|..+|+|++|+.+|+++|+
T Consensus 296 ~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~ 368 (433)
T 3qww_A 296 RYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIK 368 (433)
T ss_dssp HHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 3444555555666667899999999999999864422111 123467899999999999999999999999997
Q ss_pred h-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 396 C-----DCHN---VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 396 ~-----~p~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+ -|++ ...|+++|.+|..+|+|++|+..|++|+++
T Consensus 369 i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 369 PYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 6 3444 577999999999999999999999999986
No 220
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.78 E-value=4e-08 Score=101.08 Aligned_cols=113 Identities=13% Similarity=-0.028 Sum_probs=60.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC------------C-hHHHHHHH------hhhHHHhhhHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------------V-DDEQKLVK------SLRVSCWLNSAACCL 378 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~------------~-~~~~~~~~------~~~~~~~~nla~~~~ 378 (437)
...+...|..+++.|++++|+..|++++...|.+... . ++...... .....++++++.+|.
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHM 452 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 4456667888888888888888888888876543210 0 00000000 001233445555555
Q ss_pred hccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 379 KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 379 ~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+.|++++|+..++++++.+|.++.+|+.+|.+|...|++++|+..|++++++
T Consensus 453 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLL 504 (597)
T ss_dssp HHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 5555555555555555555555555555555555555555555555555554
No 221
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.78 E-value=9.9e-09 Score=85.64 Aligned_cols=89 Identities=18% Similarity=0.197 Sum_probs=76.5
Q ss_pred cHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhcc---CHHHHHHHHHHHHHhC-C-CCHHHHHHH
Q 013755 333 KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK---DYQGAIELCSKVLDCD-C-HNVKALYRR 407 (437)
Q Consensus 333 ~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~---~~~~Ai~~~~~al~~~-p-~~~~a~~~~ 407 (437)
....+.+.|.+++...+.+ ..+.+++|.|+.+.+ ++++++..++.+++.+ | ++.+++|++
T Consensus 13 ~l~~~~~~y~~e~~~~~~~---------------~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~L 77 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVS---------------KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYL 77 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCC---------------HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCc---------------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHH
Confidence 3456777788877654422 477899999999988 7779999999999999 7 678999999
Q ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 408 AQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 408 g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
|.+|+++++|++|+++++++|+++|+|..
T Consensus 78 Av~~~kl~~Y~~A~~y~~~lL~ieP~n~Q 106 (152)
T 1pc2_A 78 AVGNYRLKEYEKALKYVRGLLQTEPQNNQ 106 (152)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhcCCCCHH
Confidence 99999999999999999999999999853
No 222
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.77 E-value=1.7e-08 Score=85.68 Aligned_cols=91 Identities=8% Similarity=-0.076 Sum_probs=79.7
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+.+.|..+++.|+|++|+..|++++.+.|.. ..+|+++|.+|..+|+|++|+.+|++++
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~~g~~~~~~g~~~~A~~~~~~al 124 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN---------------EKALFRRAKARIAAWKLDEAEEDLKLLL 124 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc---------------hHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 4456788999999999999999999999999998765 4789999999999999999999999999
Q ss_pred HhCCCCH-HHHHHHHHHHHHhccHHHH
Q 013755 395 DCDCHNV-KALYRRAQAYMEIADLILA 420 (437)
Q Consensus 395 ~~~p~~~-~a~~~~g~~~~~lg~~~~A 420 (437)
+++|++. .+...++.+...++++.++
T Consensus 125 ~l~p~~~~~~~~~l~~~~~~~~~~~~~ 151 (162)
T 3rkv_A 125 RNHPAAASVVAREMKIVTERRAEKKAD 151 (162)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHHHHTTS
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 6677788888777666543
No 223
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.77 E-value=8.9e-08 Score=83.65 Aligned_cols=110 Identities=13% Similarity=0.048 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..++..|+|++|+..|++++.+....... ......+++++|.++..+|++++|+.++++++
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 134 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED--------PLAASANAYEVATVALHFGDLAGARQEYEKSL 134 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc--------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3456778899999999999999999999999996543311 11345779999999999999999999999999
Q ss_pred HhCC--CC----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 395 DCDC--HN----VKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 395 ~~~p--~~----~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
.+.+ .+ ..++..+|.++..+|++++|+..|++++++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 135 VYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 7642 22 35579999999999999999999999998754
No 224
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.77 E-value=3.4e-08 Score=96.26 Aligned_cols=93 Identities=14% Similarity=0.025 Sum_probs=84.9
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+.+.|..+++.++|++|+..|++|+++.|.. ..+++++|.+|..+++|++|+.++++|++
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN---------------TKALYRRAQGWQGLKEYDQALADLKKAQE 335 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 345677889999999999999999999999987754 47799999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHH
Q 013755 396 CDCHNVKALYRRAQAYMEIADLILAELD 423 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~ 423 (437)
++|++..++..++.++..++++++|...
T Consensus 336 l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 336 IAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988754
No 225
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.77 E-value=1.9e-08 Score=93.89 Aligned_cols=111 Identities=18% Similarity=0.104 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+...|..++..|+|++|+..|++++.+........ ......++.++|.++..+|++++|+.++++++
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 108 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD-------HPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34566788899999999999999999999999862210000 02245779999999999999999999999999
Q ss_pred Hh--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 395 DC--------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 395 ~~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
.+ +|....+++.+|.+|..+|++++|+..|++++++.|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 181 EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 98 777788999999999999999999999999998643
No 226
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.75 E-value=8.1e-08 Score=88.67 Aligned_cols=63 Identities=14% Similarity=0.052 Sum_probs=46.1
Q ss_pred HHHhhhHHHHHHh----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Q 013755 367 VSCWLNSAACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEAD 431 (437)
Q Consensus 367 ~~~~~nla~~~~~----~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~ 431 (437)
..+++++|.+|.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .+++++|+.+|+++++++
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 144 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC
Confidence 3566777777777 777777777777777763 67777777777777 777777777777777765
No 227
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.75 E-value=2.2e-08 Score=86.39 Aligned_cols=114 Identities=11% Similarity=0.030 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCCh--------------HHHH------HHHhhhHHHhhhHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD--------------DEQK------LVKSLRVSCWLNSA 374 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--------------~~~~------~~~~~~~~~~~nla 374 (437)
......+...|..++..|++++|+..|++++...| ++.... +... ........+++++|
T Consensus 37 P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la 115 (176)
T 2r5s_A 37 QSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELA 115 (176)
T ss_dssp HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHH
Confidence 44567788999999999999999999999988766 321100 0010 11112357889999
Q ss_pred HHHHhccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 375 ACCLKLKDYQGAIELCSKVLDCDCHN--VKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 375 ~~~~~~~~~~~Ai~~~~~al~~~p~~--~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
.++..+|++++|+..|+++++.+|++ ..+++++|.++..+|++++|+..|+++|.
T Consensus 116 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 116 VQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999999976 66999999999999999999999999985
No 228
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.75 E-value=2.4e-08 Score=97.68 Aligned_cols=107 Identities=13% Similarity=0.110 Sum_probs=72.0
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++.+.+..... .....+++++|.+|..+|++++|+.++++++.+
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 292 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDR---------AAERRANSNLGNSHIFLGQFEDAAEHYKRTLAL 292 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH---------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 34567788999999999999999999999987653321 112345666666666666666666666666666
Q ss_pred CCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 397 DCHN------VKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 397 ~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
.+.. ..+++.+|.+|..+|++++|+..|++++.+.+
T Consensus 293 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 293 AVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 5533 45566666666666666666666666665543
No 229
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.75 E-value=1.2e-07 Score=74.50 Aligned_cols=83 Identities=18% Similarity=0.095 Sum_probs=70.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..+|..++|..|+..|++|++..+..... ......++.++|.||+++|+++.|+.+++++++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~--------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIS--------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC--------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC--------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 4456889999999999999999999999987543211 01245778999999999999999999999999999
Q ss_pred CCCHHHHHHHH
Q 013755 398 CHNVKALYRRA 408 (437)
Q Consensus 398 p~~~~a~~~~g 408 (437)
|++..++.+++
T Consensus 77 P~~~~~~~n~~ 87 (104)
T 2v5f_A 77 PEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHhhHH
Confidence 99999988887
No 230
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.75 E-value=4.7e-08 Score=90.71 Aligned_cols=101 Identities=9% Similarity=-0.049 Sum_probs=87.2
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC--
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD-- 397 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~-- 397 (437)
..+..|..+++.++|++|+..|++++...+. .+...+++++|.++..+|++++|+.+|++++...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~-------------~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK-------------FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH-------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc-------------ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 7788999999999999999999876554210 1124579999999999999999999999999654
Q ss_pred CC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 398 CH-NVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 398 p~-~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
|. .+.+++++|.|+..+|+.++|+..|++++..+|+
T Consensus 204 P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 204 EACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp TTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred ccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 65 6789999999999999999999999999999997
No 231
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.74 E-value=4.6e-08 Score=91.83 Aligned_cols=106 Identities=19% Similarity=0.177 Sum_probs=76.1
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~ 399 (437)
.+...|..++..|++++|+..|++++.+.+.... ......++.++|.++..+|++++|+.++++++.+.+.
T Consensus 225 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 225 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcc---------hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 4555666666666666666666666666544321 1223567888999999999999999999999887553
Q ss_pred C------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 400 N------VKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 400 ~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
. ..+++.+|.+|..+|++++|+..|++++++.+..
T Consensus 296 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 296 LKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 2 4688899999999999999999999999887754
No 232
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.73 E-value=5.2e-08 Score=92.13 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=81.6
Q ss_pred HHHHHHhhHHH-------hCCcH-------HHHHHHHHHHHH-hhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCH
Q 013755 319 GRKKEEGNLLF-------KNGKY-------ERAGKKYNKAAD-CVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDY 383 (437)
Q Consensus 319 ~~~~~~g~~~~-------~~g~~-------~~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~ 383 (437)
..+...|..+. +.|++ ++|+..|++|+. +.|.. ..+|.++|.++.++|++
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~---------------~~~~~~~~~~~~~~~~~ 115 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMKY 115 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTC---------------HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCCH
Confidence 34555555554 35775 999999999999 56654 35688888888888999
Q ss_pred HHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 384 QGAIELCSKVLDCDCHNVK-ALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 384 ~~Ai~~~~~al~~~p~~~~-a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
++|+..|+++++++|.++. +|..+|.++..+|++++|+..|++|++++|.+
T Consensus 116 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 116 EKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC
T ss_pred HHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 9999999999998888876 88888888888888888888888888888765
No 233
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.72 E-value=3.2e-08 Score=98.71 Aligned_cols=118 Identities=9% Similarity=0.009 Sum_probs=84.0
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCCh------------------------H----HH----------
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD------------------------D----EQ---------- 359 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~------------------------~----~~---------- 359 (437)
...+...|..+...|++++|+..|++|++..|....... . ..
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 326 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKA 326 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 445678899999999999999999999998876431100 0 00
Q ss_pred HHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHH---HHHHHHHH-HHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 360 KLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVK---ALYRRAQA-YMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 360 ~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~---a~~~~g~~-~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.........+++++|.+|..+++|++|+.+|+++|+++|++.. .++++|.. +..+|++++|+..|++|++++|++.
T Consensus 327 ~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~ 406 (472)
T 4g1t_A 327 DEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSR 406 (472)
T ss_dssp HHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCH
T ss_pred hhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccH
Confidence 0011112335677888888888888888888888888876643 35666654 4577888888888888888888763
No 234
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.71 E-value=7.3e-08 Score=75.82 Aligned_cols=69 Identities=22% Similarity=0.206 Sum_probs=65.9
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
...++++|.++...++|++|+..+++++..+|.++.+++.+|.++..+|++++|+..++++++++|++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 72 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG 72 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccH
Confidence 466889999999999999999999999999999999999999999999999999999999999999864
No 235
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.71 E-value=9.2e-08 Score=90.39 Aligned_cols=112 Identities=12% Similarity=-0.016 Sum_probs=64.7
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCC-CCh---------HHHHHHHh----------hhHHHhhhHHHHHH
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS-FVD---------DEQKLVKS----------LRVSCWLNSAACCL 378 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~-~~~---------~~~~~~~~----------~~~~~~~nla~~~~ 378 (437)
..+...|..+...|++++|...|++++++.|.+.. .-. ...+.... ....++...+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~ 179 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34556677777777778888888887776654431 000 00000000 00122333333322
Q ss_pred -hccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 379 -KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 379 -~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
.+|++++|+..|+++++.+|+++.++..++..+..+|++++|+..|++++..
T Consensus 180 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 180 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 2567777777777777777777777777777777777777777777777764
No 236
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.71 E-value=7.7e-08 Score=74.81 Aligned_cols=84 Identities=11% Similarity=0.074 Sum_probs=70.2
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|++++++.|... .+|+++|.||.++|++++|+..+++++++.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYV---------------GTYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 56788999999999999999999999999988764 679999999999999999999999999987
Q ss_pred CC--CHHHHHHHHHHHHHhcc
Q 013755 398 CH--NVKALYRRAQAYMEIAD 416 (437)
Q Consensus 398 p~--~~~a~~~~g~~~~~lg~ 416 (437)
|. +..+...+...+...+.
T Consensus 72 ~~~~~~~~~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 72 REEGTQKDLSELQDAKLKAEG 92 (100)
T ss_dssp HHHSCHHHHHHHHHHHHHHHT
T ss_pred hcCCchhHHHHHHHHHHHccc
Confidence 64 44555555555554443
No 237
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.70 E-value=2.6e-08 Score=83.95 Aligned_cols=71 Identities=13% Similarity=0.144 Sum_probs=61.8
Q ss_pred HHHHHHHHhhHHHhCCcH----------HHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhcc-----
Q 013755 317 AAGRKKEEGNLLFKNGKY----------ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK----- 381 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~----------~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~----- 381 (437)
.++.+.+.|..+...+++ ++|+..|++||+++|.. ..+|+|+|.+|..+|
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~---------------~~A~~~LG~ay~~lg~l~P~ 99 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK---------------DEAVWCIGNAYTSFAFLTPD 99 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc---------------HHHHHHHHHHHHHhcccCcc
Confidence 456778888888888775 59999999999999875 478999999999885
Q ss_pred ------CHHHHHHHHHHHHHhCCCCHH
Q 013755 382 ------DYQGAIELCSKVLDCDCHNVK 402 (437)
Q Consensus 382 ------~~~~Ai~~~~~al~~~p~~~~ 402 (437)
+|++|+.+|++||+++|++..
T Consensus 100 ~~~a~g~~~eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 100 ETEAKHNFDLATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred hhhhhccHHHHHHHHHHHHHhCCCCHH
Confidence 899999999999999999853
No 238
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.68 E-value=5.4e-08 Score=78.63 Aligned_cols=68 Identities=25% Similarity=0.298 Sum_probs=64.5
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNV---KALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~---~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+++++|.+++..|+|++|+..++++++.+|++. .+++.+|.++..+|+|++|+..|++++.++|+++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~ 73 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 73 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCc
Confidence 3478999999999999999999999999999998 8999999999999999999999999999999873
No 239
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.68 E-value=2e-07 Score=85.92 Aligned_cols=63 Identities=17% Similarity=0.131 Sum_probs=48.6
Q ss_pred HHHhhhHHHHHHh----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Q 013755 367 VSCWLNSAACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEAD 431 (437)
Q Consensus 367 ~~~~~nla~~~~~----~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~ 431 (437)
..+++++|.+|.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .+++++|+.+|+++++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 180 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK 180 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 3567778888887 788888888888888765 57778888888877 788888888888887764
No 240
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.67 E-value=1.6e-07 Score=74.58 Aligned_cols=83 Identities=29% Similarity=0.381 Sum_probs=74.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|++++|+..|++++...|.. ..+++++|.++..++++++|+..++++++++
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 3456788999999999999999999999987654 3568899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc
Q 013755 398 CHNVKALYRRAQAYMEIA 415 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg 415 (437)
|++..+++.+|.++..+|
T Consensus 108 ~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 108 PNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp TTCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHhcc
Confidence 999999999999988764
No 241
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.65 E-value=1.8e-07 Score=92.75 Aligned_cols=108 Identities=9% Similarity=0.042 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+.........+.++|+|++|+..|+++|......-..+ ....+.++.|+|.+|..+|+|++|+.+|+++|+
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 3445556666778889999999999999998753321110 123567899999999999999999999999997
Q ss_pred h-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 396 C-----DCHN---VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 396 ~-----~p~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+ -|++ ...++++|.+|..+|+|++|+..|++|+++
T Consensus 358 i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 358 PYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 5 2444 467999999999999999999999999975
No 242
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.63 E-value=2.6e-07 Score=95.14 Aligned_cols=109 Identities=10% Similarity=0.052 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHhhHHHhCCcH-HHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccC--------
Q 013755 312 QGKIEAAGRKKEEGNLLFKNGKY-ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD-------- 382 (437)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~-------- 382 (437)
..+++.............+.++| ++|+..|.+++..+|... .+|++++.++.++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~---------------taW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFA---------------TLWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhH---------------HHHHHHHHHHHhcccccchhhhh
Confidence 34444445545555555666666 578999999999988753 678888888888887
Q ss_pred --HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHhCCCCC
Q 013755 383 --YQGAIELCSKVLDCDCHNVKALYRRAQAYMEIA--DLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 383 --~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg--~~~~A~~~~~~al~l~P~n~ 435 (437)
+++|+..++++++.+|++..+|+.|+.++..++ +|++|++.++++++++|.|-
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~ 143 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 143 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc
Confidence 888888888888888888888888888888888 67888888888888888773
No 243
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.61 E-value=8.9e-08 Score=89.72 Aligned_cols=114 Identities=10% Similarity=-0.096 Sum_probs=91.4
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCC-------------CChHHH------HHHHhhhHHHhhhHHHHH
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGS-------------FVDDEQ------KLVKSLRVSCWLNSAACC 377 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~-------------~~~~~~------~~~~~~~~~~~~nla~~~ 377 (437)
....+...|..+...|++++|+..|++++...|.... ...+.. .....-...+++++|.+|
T Consensus 150 ~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 150 NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 4667888999999999999999999888776653110 000011 111222357899999999
Q ss_pred HhccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 378 LKLKDYQGAIELCSKVLDCDCHN--VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 378 ~~~~~~~~Ai~~~~~al~~~p~~--~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
..+|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|+..|++++..
T Consensus 230 ~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999 899999999999999999999999999863
No 244
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.61 E-value=1.5e-07 Score=83.94 Aligned_cols=64 Identities=19% Similarity=0.007 Sum_probs=43.9
Q ss_pred HHHhhhHHHHHHh----ccCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHh
Q 013755 367 VSCWLNSAACCLK----LKDYQGAIELCSKVLDCDC--HNVKALYRRAQAYME----IADLILAELDIKKAIEA 430 (437)
Q Consensus 367 ~~~~~nla~~~~~----~~~~~~Ai~~~~~al~~~p--~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l 430 (437)
..++++||.+|.. .+++.+|+.+++++++..| .++.+++++|.+|.. .+++++|+.+|++|+++
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 3456677777766 6677777777777777665 346777777777776 66677777777777766
No 245
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.61 E-value=1.2e-07 Score=84.56 Aligned_cols=97 Identities=18% Similarity=0.124 Sum_probs=86.8
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhcc----CHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK----DYQGAIELCS 391 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~----~~~~Ai~~~~ 391 (437)
..+..+...|..++..+++++|+..|++|++.. + ..++++||.+|.. + ++++|+.+|+
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g--~---------------~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG--D---------------GDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC--C---------------HHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 346778899999999999999999999998753 1 3679999999998 7 9999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCC
Q 013755 392 KVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEADP 432 (437)
Q Consensus 392 ~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P 432 (437)
++++ +.++.+++++|.+|.. .+++++|+.+|++|++..|
T Consensus 78 ~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 78 KAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp HHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred HHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 9965 5799999999999998 8999999999999998877
No 246
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.60 E-value=1.8e-07 Score=71.89 Aligned_cols=69 Identities=14% Similarity=-0.035 Sum_probs=63.0
Q ss_pred HHHhhhHHHHHHhccC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKD---YQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~---~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..++..+|.+++..++ ..+|...++++|+++|+++.+++.+|.+++..|+|++|+..++++++.+|.++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 3668888998876655 79999999999999999999999999999999999999999999999999854
No 247
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.60 E-value=3.9e-07 Score=86.10 Aligned_cols=103 Identities=13% Similarity=-0.089 Sum_probs=92.2
Q ss_pred HHHHHHHhhHHHhCC--cHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHH----Hhc---cCHHHHHH
Q 013755 318 AGRKKEEGNLLFKNG--KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACC----LKL---KDYQGAIE 388 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~----~~~---~~~~~Ai~ 388 (437)
...+..++..+...+ ++++|+..+.++|..+|.+. .+|+.++.++ ..+ +++++++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y---------------~aW~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNY---------------QIWNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCC---------------HHHHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccH---------------HHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence 445677888888888 99999999999999988765 6788888888 666 78999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhccHH--HHHHHHHHHHHhCCCCC
Q 013755 389 LCSKVLDCDCHNVKALYRRAQAYMEIADLI--LAELDIKKAIEADPQNR 435 (437)
Q Consensus 389 ~~~~al~~~p~~~~a~~~~g~~~~~lg~~~--~A~~~~~~al~l~P~n~ 435 (437)
.|+++|+.+|+|..+|+.|+.++..++.++ ++++.++++++++|.|-
T Consensus 132 ~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999 99999999999999873
No 248
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.58 E-value=1.7e-07 Score=96.46 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=94.1
Q ss_pred HHHHHHHhhHHHhCCc----------HHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhcc--CHHH
Q 013755 318 AGRKKEEGNLLFKNGK----------YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK--DYQG 385 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~----------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~--~~~~ 385 (437)
...+..++..+...++ |++|+..|.+++...|... .+|++++.++.+++ +|++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y---------------~aW~hR~w~l~~l~~~~~~~ 127 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSY---------------GTWHHRCWLLSRLPEPNWAR 127 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcccccHHH
Confidence 4566777777777777 9999999999999988764 78999999999999 7899
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhCCCCC
Q 013755 386 AIELCSKVLDCDCHNVKALYRRAQAYMEIA-DLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 386 Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~P~n~ 435 (437)
|+.+|++++++||.|..||+.|+.++..++ .+++|+++++++++++|+|.
T Consensus 128 el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 128 ELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 999999999999999999999999999999 99999999999999999884
No 249
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.58 E-value=1.4e-07 Score=93.32 Aligned_cols=77 Identities=10% Similarity=0.177 Sum_probs=64.6
Q ss_pred EEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEE
Q 013755 215 SYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYE 294 (437)
Q Consensus 215 ~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~ 294 (437)
+|+|+. ||+.|+++ + +.|+.|.+|.+.++|||+.+|.+|++|++..|.+++..+||..+ .+|.++.|.
T Consensus 167 ~y~g~~-dG~~fd~~-~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~--------lag~~~~F~ 234 (432)
T 1w26_A 167 DFTGSV-DGEEFEGG-K--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAEN--------LKGKAAKFA 234 (432)
T ss_dssp CEEEES-SSCBCSSC-C--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTT--------TSSCEEEEE
T ss_pred EEEEee-CCeEccCC-C--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCC--------CCCceEEEE
Confidence 445553 67777776 3 68999999999999999999999999999999999999998643 256799999
Q ss_pred EEEeeeecc
Q 013755 295 VEMMDFIKE 303 (437)
Q Consensus 295 vel~~~~~~ 303 (437)
|+|+.+...
T Consensus 235 V~v~~v~~~ 243 (432)
T 1w26_A 235 INLKKVEER 243 (432)
T ss_dssp EECCEECCE
T ss_pred EEEEEEecc
Confidence 999998753
No 250
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.57 E-value=1.4e-07 Score=75.72 Aligned_cols=68 Identities=24% Similarity=0.193 Sum_probs=64.8
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
...++++|.++...++|++|+..+++++..+|.++.+++.+|.+|..+|++++|+..|++++.+.|++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 46688999999999999999999999999999999999999999999999999999999999998865
No 251
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.57 E-value=3.6e-07 Score=88.26 Aligned_cols=108 Identities=16% Similarity=0.057 Sum_probs=66.9
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+..+...|..++..|+|++|+..|++++.+.+..... .....+++++|.++..+|++++|+.++++++++
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW---------HYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH---------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44566777778888888888888888888776653321 112344556666666666666666666666654
Q ss_pred C--------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 397 D--------CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 397 ~--------p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
. |....++.++|.++..+|++++|+..+++++.+.|.
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 123 INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 3 223345556666666666666666666666665553
No 252
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.55 E-value=3.1e-07 Score=72.87 Aligned_cols=85 Identities=12% Similarity=0.013 Sum_probs=70.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
...+...|..++..|+|++|+..|++++...|.. ..+++++|.+|..+|++++|+..++++++++
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY---------------SVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 4578899999999999999999999999998764 3678999999999999999999999999998
Q ss_pred CC--CHHHHHHHHHHHHHhccH
Q 013755 398 CH--NVKALYRRAQAYMEIADL 417 (437)
Q Consensus 398 p~--~~~a~~~~g~~~~~lg~~ 417 (437)
|. +..++..+...+..+++.
T Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 84 QSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhccc
Confidence 74 455555555555555443
No 253
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=4e-07 Score=74.93 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=73.7
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
....+...|..++..++|++|+..|++++...|.+ ..+++++|.+|..++++++|+.++++++++
T Consensus 64 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 64 QAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD---------------VKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 36778899999999999999999999999997764 367899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 013755 397 DCHNVKALYRRAQAYME 413 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~ 413 (437)
+|++..++..++.+...
T Consensus 129 ~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 129 EPKNKVFQEALRNISGP 145 (148)
T ss_dssp CSSCHHHHHHHHHHHCS
T ss_pred CCCcHHHHHHHHHHHhh
Confidence 99999999888877543
No 254
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.52 E-value=2.2e-07 Score=86.76 Aligned_cols=69 Identities=16% Similarity=0.123 Sum_probs=66.1
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
...+.++|.++++.|+|++|+..|+++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 72 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 72 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH
Confidence 456889999999999999999999999999999999999999999999999999999999999999874
No 255
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.51 E-value=6.2e-07 Score=84.68 Aligned_cols=101 Identities=15% Similarity=0.015 Sum_probs=90.4
Q ss_pred HHHHHhhHH----HhC---CcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHH--HHHHHH
Q 013755 320 RKKEEGNLL----FKN---GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQ--GAIELC 390 (437)
Q Consensus 320 ~~~~~g~~~----~~~---g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~--~Ai~~~ 390 (437)
.+..++..+ ... +++++++..+.+++...|.+. .+|++++.+..+++.++ +++.++
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny---------------~aW~~R~~vl~~l~~~~~~~EL~~~ 169 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH---------------HVWSYRKWLVDTFDLHNDAKELSFV 169 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhcccChHHHHHHH
Confidence 344455555 444 789999999999999988764 78999999999999999 999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHhCCCCC
Q 013755 391 SKVLDCDCHNVKALYRRAQAYMEIAD------LILAELDIKKAIEADPQNR 435 (437)
Q Consensus 391 ~~al~~~p~~~~a~~~~g~~~~~lg~------~~~A~~~~~~al~l~P~n~ 435 (437)
+++++.+|.|..||..|+.++..++. ++++++++++++.++|+|.
T Consensus 170 ~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 170 DKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999998 9999999999999999985
No 256
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.48 E-value=1.2e-06 Score=72.52 Aligned_cols=89 Identities=12% Similarity=-0.059 Sum_probs=80.7
Q ss_pred HhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHh----ccCHHHHHHHHHHHHHhCCC
Q 013755 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK----LKDYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 324 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----~~~~~~Ai~~~~~al~~~p~ 399 (437)
.|..++..+.+++|+..|++|.+... ..++++||.+|.. .+++.+|+.+|++|.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~-----------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNS-----------------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTC-----------------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 77778888889999999999998631 4779999999999 89999999999999987 6
Q ss_pred CHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Q 013755 400 NVKALYRRAQAYME----IADLILAELDIKKAIEAD 431 (437)
Q Consensus 400 ~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~ 431 (437)
++.+++++|.+|.. .+++++|+.+|++|.++.
T Consensus 92 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 92 DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 89999999999999 999999999999999874
No 257
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.47 E-value=1.3e-06 Score=83.14 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=87.9
Q ss_pred HHHHHHHhhHHHhCC--cHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccC-HHHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNG--KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD-YQGAIELCSKVL 394 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~-~~~Ai~~~~~al 394 (437)
...+..++..+...+ .|++++..+.+++..+|.+. .+|++++.+...++. +++++.++++++
T Consensus 108 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy---------------~AW~~R~~vl~~l~~~~~eel~~~~~~I 172 (331)
T 3dss_A 108 YGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF---------------HCWDYRRFVAAQAAVAPAEELAFTDSLI 172 (331)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 345556677777777 48999999999999887653 779999999999988 689999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHh--------------ccHHHHHHHHHHHHHhCCCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEI--------------ADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~l--------------g~~~~A~~~~~~al~l~P~n~ 435 (437)
+.+|.|..||..++.++..+ +.++++++++++++.++|+|.
T Consensus 173 ~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 173 TRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999888 568999999999999999885
No 258
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.47 E-value=5.8e-07 Score=70.50 Aligned_cols=69 Identities=22% Similarity=0.132 Sum_probs=62.5
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCD-------CHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~-------p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
..-++.+|..++++++|..|+..+++|++.. +..+..+.++|.||.++|++++|+..++++++++|+++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 3447899999999999999999999999863 34578899999999999999999999999999999985
No 259
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.45 E-value=1.1e-06 Score=83.59 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=64.9
Q ss_pred HHhhHHHhCCcHH-HHHHHHHHHHHhhccCCCC---------------Ch--------HHHH------HHHhhhHHHhhh
Q 013755 323 EEGNLLFKNGKYE-RAGKKYNKAADCVSEDGSF---------------VD--------DEQK------LVKSLRVSCWLN 372 (437)
Q Consensus 323 ~~g~~~~~~g~~~-~A~~~y~~al~~~~~~~~~---------------~~--------~~~~------~~~~~~~~~~~n 372 (437)
..-....+.|.|. +|+..+.++|.++|..... .. ++.. ....-...+|+.
T Consensus 34 ~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~h 113 (331)
T 3dss_A 34 QAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHH 113 (331)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3334445677776 7999999999998875311 00 0000 011111234555
Q ss_pred HHHHHHhcc--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHhCCCC
Q 013755 373 SAACCLKLK--DYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIAD-LILAELDIKKAIEADPQN 434 (437)
Q Consensus 373 la~~~~~~~--~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~-~~~A~~~~~~al~l~P~n 434 (437)
++.++.+++ .|++++.+|+++++++|.|..||+.++.++..++. ++++++++.++++.+|+|
T Consensus 114 R~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N 178 (331)
T 3dss_A 114 RCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 178 (331)
T ss_dssp HHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC
Confidence 555555555 36666666666666666666666666666666665 466666666666666655
No 260
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.43 E-value=9.4e-07 Score=89.04 Aligned_cols=109 Identities=13% Similarity=-0.039 Sum_probs=89.5
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+.+.|..|...|+|++|+.+|+++|.+.......+ ....+..++|||.+|..+|+|++|+..|++||+
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4567788899999999999999999999999764321110 123467899999999999999999999999997
Q ss_pred h-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 396 C-----DCHN---VKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 396 ~-----~p~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
+ -|++ .+.+-.++.++.+++.|++|...|+++.+-.
T Consensus 422 i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 422 ILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 3555 4667889999999999999999999987643
No 261
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.38 E-value=1.2e-06 Score=83.77 Aligned_cols=99 Identities=16% Similarity=-0.002 Sum_probs=59.3
Q ss_pred HHHHhhHHHhCC-cHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhc-c-CHHHHHHHHHHHHHhC
Q 013755 321 KKEEGNLLFKNG-KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL-K-DYQGAIELCSKVLDCD 397 (437)
Q Consensus 321 ~~~~g~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-~-~~~~Ai~~~~~al~~~ 397 (437)
+..++..+...+ .+++++..+.++|..+|.+. .+|+.++.++.++ + ++++++.+|+++|+++
T Consensus 91 Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny---------------~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~d 155 (349)
T 3q7a_A 91 WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSY---------------QVWHHRLLLLDRISPQDPVSEIEYIHGSLLPD 155 (349)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCH---------------HHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Confidence 344455555555 36666666666665555432 4566666666655 5 5666666666666666
Q ss_pred CCCHHHHHHHHHHHHHhccHH--------HHHHHHHHHHHhCCCC
Q 013755 398 CHNVKALYRRAQAYMEIADLI--------LAELDIKKAIEADPQN 434 (437)
Q Consensus 398 p~~~~a~~~~g~~~~~lg~~~--------~A~~~~~~al~l~P~n 434 (437)
|+|..||+.|+.++..++.++ ++++.++++++++|.|
T Consensus 156 pkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 156 PKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 666666666666666666655 6666666666666655
No 262
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.36 E-value=4.2e-06 Score=80.64 Aligned_cols=108 Identities=13% Similarity=0.001 Sum_probs=90.0
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...|..++..|+|++|+..|++++...+...... ......++.++|.++..+|++++|+.++++++.+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ-------LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT-------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc-------CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 44467789999999999999999999999876432210 01234678899999999999999999999999987
Q ss_pred CC-----CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 398 CH-----NVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 398 p~-----~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
+. ...+++.+|.++..+|++++|+..+++++.+.+
T Consensus 166 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 166 SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp TTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred hccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 75 356899999999999999999999999998744
No 263
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.35 E-value=2.5e-06 Score=81.66 Aligned_cols=93 Identities=16% Similarity=0.113 Sum_probs=84.6
Q ss_pred HHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhcc-CHHHHHHHHHHHHHhCCCCHHHHHH
Q 013755 328 LFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK-DYQGAIELCSKVLDCDCHNVKALYR 406 (437)
Q Consensus 328 ~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~-~~~~Ai~~~~~al~~~p~~~~a~~~ 406 (437)
..+.+..++|+..+.++|.++|... .+|+.++.++..++ .+++++..++++|..+|++..+|+.
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~~y---------------taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~h 128 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPAHY---------------TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHH 128 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHhCchhH---------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 4445566889999999999998763 78999999999999 5999999999999999999999999
Q ss_pred HHHHHHHh-c-cHHHHHHHHHHHHHhCCCCC
Q 013755 407 RAQAYMEI-A-DLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 407 ~g~~~~~l-g-~~~~A~~~~~~al~l~P~n~ 435 (437)
|+.++..+ + +++++++.++++++++|.|-
T Consensus 129 R~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy 159 (349)
T 3q7a_A 129 RLLLLDRISPQDPVSEIEYIHGSLLPDPKNY 159 (349)
T ss_dssp HHHHHHHHCCSCCHHHHHHHHHHTSSCTTCH
T ss_pred HHHHHHHhcCCChHHHHHHHHHHHHhCCCCH
Confidence 99999998 8 99999999999999999884
No 264
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.24 E-value=4.7e-06 Score=84.79 Aligned_cols=118 Identities=11% Similarity=-0.001 Sum_probs=81.2
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCC----------hHHHHHHHhhh----------HHHhhhHHHH-
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFV----------DDEQKLVKSLR----------VSCWLNSAAC- 376 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~----------~~~~~~~~~~~----------~~~~~nla~~- 376 (437)
...+...|..+.+.|++++|...|++++...|.+.... ....+...... ..++...+..
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~ 400 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 400 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHH
Confidence 34456667777888899999999999988766432100 00001111111 1122233322
Q ss_pred HHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 377 ~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+..+|++++|+..|+++++.+|+++.++..++..+..+|++++|+..|++|+...|.++
T Consensus 401 ~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~ 459 (530)
T 2ooe_A 401 YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPP 459 (530)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCG
T ss_pred HHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCH
Confidence 44688899999999999999999999999999999999999999999999998877654
No 265
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.22 E-value=4.3e-06 Score=85.06 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=78.8
Q ss_pred HHHHHHHhhHHHh-------CCcHH-------HHHHHHHHHHH-hhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccC
Q 013755 318 AGRKKEEGNLLFK-------NGKYE-------RAGKKYNKAAD-CVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD 382 (437)
Q Consensus 318 ~~~~~~~g~~~~~-------~g~~~-------~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~ 382 (437)
...+...|..+.+ .|+++ +|+..|++|+. +.|.. ..+|+++|..+.++|+
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~---------------~~l~~~~~~~~~~~g~ 336 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMK 336 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSC---------------HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCC
Confidence 3455667777765 78887 99999999997 66653 3668888888888888
Q ss_pred HHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 383 YQGAIELCSKVLDCDCHNV-KALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~~-~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
+++|+..|+++++++|.++ .+|..++.++..+|++++|+..|++|++..|.
T Consensus 337 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 8888888888888888875 57888888877778888888888888776664
No 266
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.18 E-value=8.9e-07 Score=86.36 Aligned_cols=77 Identities=9% Similarity=0.168 Sum_probs=59.9
Q ss_pred EEEEEecCccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEE
Q 013755 215 SYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYE 294 (437)
Q Consensus 215 ~y~~~~~~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~ 294 (437)
+|+|+. ||..|+++ .+.|+.|.+|.+.++|||+.+|.+|++||+..|.++....|+.. -.+|.++.|.
T Consensus 170 ~y~g~~-dG~~fd~~---~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~--------~laGk~~~F~ 237 (392)
T 1t11_A 170 DFVGSI-DGVEFEGG---KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAE--------NLKGKAAKFA 237 (392)
T ss_dssp EEEEES-SSSCCTTC---EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCT--------TTSSCEEEEC
T ss_pred EEEEEE-CCEEccCC---CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccC--------CCCCCeEEEE
Confidence 444442 56666654 35799999999999999999999999999999999644456632 2357899999
Q ss_pred EEEeeeecc
Q 013755 295 VEMMDFIKE 303 (437)
Q Consensus 295 vel~~~~~~ 303 (437)
|+|+.+...
T Consensus 238 V~v~~i~~~ 246 (392)
T 1t11_A 238 IKVNKVEAR 246 (392)
T ss_dssp CCEEEEEEE
T ss_pred EEEEEEEcC
Confidence 999999754
No 267
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.17 E-value=1.2e-05 Score=80.84 Aligned_cols=65 Identities=20% Similarity=0.048 Sum_probs=58.5
Q ss_pred HHHhhhHHHHHHh----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCCC
Q 013755 367 VSCWLNSAACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 367 ~~~~~nla~~~~~----~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~ 433 (437)
..+++++|.+|.. .+++++|+.+|+++++. .++.+++++|.+|.. .+++++|+.+|++|++.+|+
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 4678999999999 89999999999999986 478999999999998 89999999999999998854
No 268
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.17 E-value=2.9e-05 Score=74.37 Aligned_cols=114 Identities=9% Similarity=-0.032 Sum_probs=83.9
Q ss_pred HHHHHhhHHHhC---CcHHHHHHHHHHHHHhhccCCC-----------------CChHHHHHHH------------hhhH
Q 013755 320 RKKEEGNLLFKN---GKYERAGKKYNKAADCVSEDGS-----------------FVDDEQKLVK------------SLRV 367 (437)
Q Consensus 320 ~~~~~g~~~~~~---g~~~~A~~~y~~al~~~~~~~~-----------------~~~~~~~~~~------------~~~~ 367 (437)
.++-+|..++.. ..+.+|+.+|++|+++.|.... ........+. ....
T Consensus 198 dl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a 277 (372)
T 3ly7_A 198 TNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLS 277 (372)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCH
Confidence 344455555543 4568999999999999886321 1111111111 1112
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.++.-+|..+...|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|.+|+.++|..
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 3444566777778999999999999999997 57889999999999999999999999999999975
No 269
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.16 E-value=3e-06 Score=68.08 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=73.4
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHH---HHHHHHHHHHhC-C-CCHHHHHH
Q 013755 332 GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQG---AIELCSKVLDCD-C-HNVKALYR 406 (437)
Q Consensus 332 g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~---Ai~~~~~al~~~-p-~~~~a~~~ 406 (437)
.....+.+.|.+++...+. ...+.+++|.|+.+..+... +|..++..+..+ | ..-..+|.
T Consensus 15 ~~l~~~~~~y~~e~~~~~~---------------s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~ 79 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSV---------------SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFY 79 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCC---------------CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCC---------------cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 3445666778777664331 24678899999999887666 999999988877 5 56789999
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 407 RAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 407 ~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
+|.+++++|+|++|+.+++.+|+++|+|..
T Consensus 80 LAvg~yklg~Y~~A~~~~~~lL~~eP~n~Q 109 (126)
T 1nzn_A 80 LAVGNYRLKEYEKALKYVRGLLQTEPQNNQ 109 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999999999999999864
No 270
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.14 E-value=2.1e-05 Score=65.97 Aligned_cols=100 Identities=10% Similarity=0.058 Sum_probs=81.0
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC-ChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC-
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF-VDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD- 397 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~- 397 (437)
.+++....++..+.|+.|+..+..++.+..+++.. .. .....++..+|.+++..++|.+|...|++||++.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp-------~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k 94 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSP-------PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKK 94 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccH-------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 35677888999999999999999999887655432 21 3346778999999999999999999999998652
Q ss_pred --CCC----------------------HHHHHHHHHHHHHhccHHHHHHHHHH
Q 013755 398 --CHN----------------------VKALYRRAQAYMEIADLILAELDIKK 426 (437)
Q Consensus 398 --p~~----------------------~~a~~~~g~~~~~lg~~~~A~~~~~~ 426 (437)
+++ ....|++|.||.+++++++|+..++.
T Consensus 95 ~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 95 ALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp CC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 111 25789999999999999999998764
No 271
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.14 E-value=1.1e-05 Score=67.09 Aligned_cols=81 Identities=14% Similarity=0.038 Sum_probs=68.3
Q ss_pred HHHHHHHhhHHHhCC---cHHHHHHHHHHHHHhh-ccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNG---KYERAGKKYNKAADCV-SEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g---~~~~A~~~y~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
.+..++.|..+.+.+ ++++++..++..++.. |. ....++++||..|+++++|.+|+++|+++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~--------------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKE--------------EQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH--------------HHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc--------------chHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 466778888899988 7889999999999875 31 13578999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHH
Q 013755 394 LDCDCHNVKALYRRAQAYM 412 (437)
Q Consensus 394 l~~~p~~~~a~~~~g~~~~ 412 (437)
|+++|+|..|...+..+-.
T Consensus 98 L~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 98 LQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp HHHCTTCHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHH
Confidence 9999999988776655443
No 272
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.09 E-value=3.7e-06 Score=77.93 Aligned_cols=96 Identities=15% Similarity=-0.002 Sum_probs=80.2
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p 398 (437)
......+..+...|+|++|...|..++...|. .. +++.+|.++++.++|++|+.++++++...+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~---------------~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d 166 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE---------------HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPD 166 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH---------------HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc---------------hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCC
Confidence 34456788889999999999999988765443 12 689999999999999999999998877642
Q ss_pred CC--HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 399 HN--VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 399 ~~--~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
.. ..+++.+|.++..+|++++|+.+|++++.-
T Consensus 167 ~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g 200 (282)
T 4f3v_A 167 KFLAGAAGVAHGVAAANLALFTEAERRLTEANDS 200 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcC
Confidence 21 358999999999999999999999999853
No 273
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.06 E-value=1.7e-05 Score=77.87 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC------------------ChHHHHH-------------
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------------------VDDEQKL------------- 361 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~------------------~~~~~~~------------- 361 (437)
........+...|..|++.|+|++|+..|.+++...+..... ..+....
T Consensus 50 ~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 129 (434)
T 4b4t_Q 50 RRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREK 129 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSS
T ss_pred HhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhC
Confidence 444556678888999999999999999998888765442210 0111100
Q ss_pred HHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 362 VKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC------DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 362 ~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
...+...++.++|.+|..+|+|.+|+..+++++.. .+....++..++.+|..+|+|++|+..|++++.+.+.
T Consensus 130 ~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 130 RVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp CCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 01134568899999999999999999999999876 2334688999999999999999999999999987653
No 274
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.06 E-value=1.7e-05 Score=73.00 Aligned_cols=89 Identities=11% Similarity=0.041 Sum_probs=77.2
Q ss_pred cHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhc-----cCHHHHHHHHHHHHHhCCCC-HHHHHH
Q 013755 333 KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL-----KDYQGAIELCSKVLDCDCHN-VKALYR 406 (437)
Q Consensus 333 ~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-----~~~~~Ai~~~~~al~~~p~~-~~a~~~ 406 (437)
....|...+++|++++|.. +...+|..+|..|.+. |+.++|..+|++||+++|+. ..+++.
T Consensus 178 ~l~~A~a~lerAleLDP~~-------------~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~ 244 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSY-------------QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHIT 244 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTH-------------HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCc-------------ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHH
Confidence 3567778888888887752 2357899999999996 99999999999999999975 999999
Q ss_pred HHHHHHH-hccHHHHHHHHHHHHHhCCCC
Q 013755 407 RAQAYME-IADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 407 ~g~~~~~-lg~~~~A~~~~~~al~l~P~n 434 (437)
.|..+.. ++++++|.+.+++|+..+|..
T Consensus 245 YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 245 YADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 9999988 599999999999999998874
No 275
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.03 E-value=4.2e-05 Score=76.87 Aligned_cols=111 Identities=16% Similarity=0.055 Sum_probs=56.8
Q ss_pred HHHHHHHhhHHHh----CCcHHHHHHHHHHHHHhhccCC--------------CCChHHH-----HHHHhhhHHHhhhHH
Q 013755 318 AGRKKEEGNLLFK----NGKYERAGKKYNKAADCVSEDG--------------SFVDDEQ-----KLVKSLRVSCWLNSA 374 (437)
Q Consensus 318 ~~~~~~~g~~~~~----~g~~~~A~~~y~~al~~~~~~~--------------~~~~~~~-----~~~~~~~~~~~~nla 374 (437)
+..+...|..++. .+++++|+..|+++++...... .-+.++- .....-...++++||
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg 118 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLG 118 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 4556667777776 6777777777777766411000 0000000 000011123455555
Q ss_pred HHHHh----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHh
Q 013755 375 ACCLK----LKDYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIEA 430 (437)
Q Consensus 375 ~~~~~----~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l 430 (437)
.+|.. .+++++|+.+|+++++. +++.+++++|.+|.. .+++++|+.+|+++++.
T Consensus 119 ~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 119 VMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ 180 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 55555 55555555555555543 345555555555555 55555555555555543
No 276
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.00 E-value=2.1e-05 Score=78.52 Aligned_cols=31 Identities=10% Similarity=-0.075 Sum_probs=26.5
Q ss_pred HHHHHhhHHHhCC---cHHHHHHHHHHHHHhhcc
Q 013755 320 RKKEEGNLLFKNG---KYERAGKKYNKAADCVSE 350 (437)
Q Consensus 320 ~~~~~g~~~~~~g---~~~~A~~~y~~al~~~~~ 350 (437)
.+...|..+...| ++++|+..|++++...+.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~ 211 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV 211 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH
Confidence 5677888899999 999999999999987654
No 277
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.96 E-value=2.7e-05 Score=76.34 Aligned_cols=65 Identities=8% Similarity=-0.105 Sum_probs=55.9
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDC------HNVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p------~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
.++.+++.++...+++++|+..|++++...+ ...+++.++|.+|..+|+|++|+..+++++....
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~ 166 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFK 166 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHH
Confidence 4567788889899999999999999997643 2368899999999999999999999999987643
No 278
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.93 E-value=3.6e-05 Score=63.40 Aligned_cols=78 Identities=17% Similarity=0.005 Sum_probs=69.5
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 013755 332 GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAY 411 (437)
Q Consensus 332 g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~ 411 (437)
+++++|+..|+++.+.... .+. +|.+|.....+++|+.+|+++.+. .++.+++++|.+|
T Consensus 9 ~d~~~A~~~~~~aa~~g~~-----------------~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y 67 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM-----------------FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT-----------------THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCH-----------------hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHH
Confidence 5789999999999987522 223 999999999999999999999997 6899999999999
Q ss_pred HH----hccHHHHHHHHHHHHHh
Q 013755 412 ME----IADLILAELDIKKAIEA 430 (437)
Q Consensus 412 ~~----lg~~~~A~~~~~~al~l 430 (437)
.. .+++++|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCccHHHHHHHHHHHHcC
Confidence 99 89999999999999876
No 279
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.92 E-value=1.8e-05 Score=78.21 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=63.0
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEEeCCccccccHHHHhccccCCceEEEEEecCCCCCCCCCCCCCCCC
Q 013755 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (437)
Q Consensus 61 ~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~G~~~~~~~~ip~~~ayg~~~~~~i~~ 140 (437)
.++.||.|+|+|+++. ||..|+++.. .++.+.+|.+. + |+++|.||++|++++|++++ +
T Consensus 154 ~a~~gD~V~id~~~~~-dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF---------------a 212 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-EEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY---------------E 212 (433)
T ss_dssp CCCTTSEEEEEEEEEC-TTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE---------------T
T ss_pred ccCCCCEEEEEEEEEE-CCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee---------------C
Confidence 5789999999999884 9999998654 67888888887 4 99999999999999994433 3
Q ss_pred CCcEEEEEEEeceeeee
Q 013755 141 NSVVQFEVELVSWITVV 157 (437)
Q Consensus 141 ~~~~~f~v~l~~~~~~~ 157 (437)
+.+..|.|++..+....
T Consensus 213 Gk~a~F~VtV~~Ik~~~ 229 (433)
T 3gty_X 213 GKKYTYKLEVEEVYKRT 229 (433)
T ss_dssp TEEEEEEEEEEEEEEEC
T ss_pred CCeEEEEEEEEEEEEec
Confidence 56789999999986544
No 280
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.92 E-value=2.9e-05 Score=59.40 Aligned_cols=69 Identities=16% Similarity=0.076 Sum_probs=60.1
Q ss_pred HHHHHHHhhHHHhCCc---HHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGK---YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
+..+...|..++..++ .++|..++++||.++|.+. .+++.+|..+++.|+|++|+.++++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~---------------rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNE---------------AALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567778888865555 7999999999999998864 778999999999999999999999999
Q ss_pred HhCCCCH
Q 013755 395 DCDCHNV 401 (437)
Q Consensus 395 ~~~p~~~ 401 (437)
+.+|.++
T Consensus 71 ~~~p~~~ 77 (93)
T 3bee_A 71 DSNDPNL 77 (93)
T ss_dssp TCCCTTC
T ss_pred hhCCCCc
Confidence 9999843
No 281
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.88 E-value=2e-05 Score=77.47 Aligned_cols=32 Identities=9% Similarity=0.001 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 403 ALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 403 a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
-+..+..+|.++|+|++|+..|+++|.+++.+
T Consensus 209 ~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 209 ELEELINYYQDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC
T ss_pred hHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH
Confidence 34455678888999999999999999888654
No 282
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.84 E-value=4.9e-05 Score=83.68 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=77.2
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC-
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC- 398 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p- 398 (437)
.+...|..++..|+|++|+.+|.+|- .|..+|.||.++|+|++|++.+.+|...++
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~aW 1253 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANSTRTW 1253 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 45679999999999999999999962 277899999999999999999998855433
Q ss_pred ------------------------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 399 ------------------------HNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 399 ------------------------~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
.++..+..++..|..+|.|++|+..|+++|.++|.+
T Consensus 1254 kev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1254 KEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhH
Confidence 244556678888999999999999999999999765
No 283
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.83 E-value=4.8e-05 Score=75.84 Aligned_cols=58 Identities=19% Similarity=-0.013 Sum_probs=34.5
Q ss_pred HHhhhHHHHHHhcc-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHH
Q 013755 368 SCWLNSAACCLKLK-----DYQGAIELCSKVLDCDCHNVKALYRRAQAYME----IADLILAELDIKKAIE 429 (437)
Q Consensus 368 ~~~~nla~~~~~~~-----~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~ 429 (437)
.++++||.+|. .| ++.+|+.+|+++. +.++.+++++|.+|.. ..++++|+.+|++|.+
T Consensus 284 ~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 284 RAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp HHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 44556666665 33 6666666666666 5566666666666655 2366666666666654
No 284
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.76 E-value=4.9e-05 Score=71.35 Aligned_cols=94 Identities=12% Similarity=-0.001 Sum_probs=75.8
Q ss_pred HhhHHHhCC--cHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh-----
Q 013755 324 EGNLLFKNG--KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC----- 396 (437)
Q Consensus 324 ~g~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~----- 396 (437)
.|...+..| ++++|...|+++....|... ...+++| |++++|+|++|...++++++.
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~-------------~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~ 245 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWK-------------TQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVE 245 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHH-------------HHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTT
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcc-------------cHHHHHH---HHHHcCCHHHHHHHHHHHHHhccccc
Confidence 443345445 99999999999876655300 1234455 899999999999999988876
Q ss_pred -----CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 397 -----DCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 397 -----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
+|+++.++.++..+...+|+ +|.+.+.++.+++|+++
T Consensus 246 ~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 246 QKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp TCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 58999999999999999998 89999999999999985
No 285
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.74 E-value=0.00011 Score=81.06 Aligned_cols=107 Identities=14% Similarity=0.027 Sum_probs=82.5
Q ss_pred HHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC--ChHHHHHHH-----hhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF--VDDEQKLVK-----SLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 322 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~--~~~~~~~~~-----~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
.+.|..+...|.|++|...|+++-........+ .-..++... -....+|+++|.++..+|+|++|+.+|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 345999999999999999999974322110000 001112211 123578999999999999999999999886
Q ss_pred HhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 395 DCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
+++.+|++.|.++..+|+|++|+++|..|.+.+++
T Consensus 1132 ----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999988754
No 286
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.70 E-value=9e-05 Score=73.34 Aligned_cols=94 Identities=10% Similarity=-0.099 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...+..+.+.|..|...|+|++|+.+|+++|.+........ ....+..++|||.+|..+|+|++|+..+++|+
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 45567788899999999999999999999999754311110 13356789999999999999999999999999
Q ss_pred Hh-----CCCCH---HHHHHHHHHHHHhc
Q 013755 395 DC-----DCHNV---KALYRRAQAYMEIA 415 (437)
Q Consensus 395 ~~-----~p~~~---~a~~~~g~~~~~lg 415 (437)
++ -|+++ .++.+++.++..++
T Consensus 399 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 399 DIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 76 45554 55677777776654
No 287
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.61 E-value=0.00011 Score=59.09 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=59.0
Q ss_pred HHHhhhHHHHHHhccC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 367 VSCWLNSAACCLKLKD---YQGAIELCSKVLDCDCH-NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~---~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
..+.+|.|.|+.+..+ ..++|..++..+..+|. .-..+|.+|.++.++|+|++|+.+.+.+|+++|+|..
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~Q 113 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 113 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHH
Confidence 4667888888887665 45789999999988884 4788999999999999999999999999999999853
No 288
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.60 E-value=0.00016 Score=58.95 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=59.4
Q ss_pred HHHhhhHHHHHHhccC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCC
Q 013755 367 VSCWLNSAACCLKLKD---YQGAIELCSKVLDCDCH-NVKALYRRAQAYMEIADLILAELDIKKAIEADPQNRN 436 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~---~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~ 436 (437)
..+.+|.|.|+.+..+ -.+++..++..+..+|. .-..+|.+|.+++++|+|++|+.+.+.+|+++|+|..
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~Q 112 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 112 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHH
Confidence 4667888888888665 45789999999988884 5688999999999999999999999999999999853
No 289
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.54 E-value=0.0002 Score=67.14 Aligned_cols=107 Identities=7% Similarity=-0.093 Sum_probs=70.6
Q ss_pred HHHhhHHHhCCcHHHHHHHHHHHHHhhc--cCCC-------------CChH---HHHHHHhhh-------HHHhhhHHHH
Q 013755 322 KEEGNLLFKNGKYERAGKKYNKAADCVS--EDGS-------------FVDD---EQKLVKSLR-------VSCWLNSAAC 376 (437)
Q Consensus 322 ~~~g~~~~~~g~~~~A~~~y~~al~~~~--~~~~-------------~~~~---~~~~~~~~~-------~~~~~nla~~ 376 (437)
...|..++..|++++|++.+.+++...+ .... ..+. ..+.++... -.+..+++..
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea 183 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAES 183 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHH
Confidence 4667777777777777777777754332 1100 0011 111112221 2445666655
Q ss_pred --HHhcc--CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 377 --CLKLK--DYQGAIELCSKVLDCDCH--NVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 377 --~~~~~--~~~~Ai~~~~~al~~~p~--~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
.+..| ++.+|+..|+++.+..|+ ....+++ +++.+|+|++|.+.+++++++.
T Consensus 184 ~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~ 241 (310)
T 3mv2_B 184 YIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDY 241 (310)
T ss_dssp HHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHH
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhc
Confidence 55556 999999999999888886 3445555 9999999999999999888874
No 290
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.54 E-value=0.0017 Score=63.18 Aligned_cols=115 Identities=12% Similarity=-0.017 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCC--C-----CChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG--S-----FVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAI 387 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~--~-----~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai 387 (437)
......+...|......++.+.|...|.+|+.+..... . .-..+...+.+....+...++.++...|++.+|+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 34566777778888889999999999999999864321 1 1123446677888888899999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 388 ELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 388 ~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
..+.+++..+|-+..++..+-.+|...|+..+|++.|+++-+
T Consensus 192 ~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988754
No 291
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.50 E-value=0.00026 Score=69.95 Aligned_cols=80 Identities=13% Similarity=-0.010 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
..+..+.+.|..|...|+|++|+.+|+++|.+.......+ ....+..++|||.+|..+|+|++|+..+++||+
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 4566778899999999999999999999999764321110 123467899999999999999999999999997
Q ss_pred h-----CCCCHH
Q 013755 396 C-----DCHNVK 402 (437)
Q Consensus 396 ~-----~p~~~~ 402 (437)
+ -|+++.
T Consensus 411 i~~~~lG~~Hp~ 422 (433)
T 3qww_A 411 IMEVAHGKDHPY 422 (433)
T ss_dssp HHHHHTCTTCHH
T ss_pred HHHHHcCCCChH
Confidence 6 466654
No 292
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.35 E-value=0.0011 Score=53.00 Aligned_cols=79 Identities=13% Similarity=0.014 Sum_probs=58.4
Q ss_pred HHHHHHhhHHHhCCcHHH---HHHHHHHHHHhh-ccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 319 GRKKEEGNLLFKNGKYER---AGKKYNKAADCV-SEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~---A~~~y~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
+..++.|..+.+..+-.. ++..++..++.. | ..+..+++.||..++++|+|.+|+.+|+.+|
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p--------------~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL 101 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK--------------EEQRDYVFYLAVGNYRLKEYEKALKYVRGLL 101 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH--------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc--------------chHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 344555666666655444 777777665542 1 1245789999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHH
Q 013755 395 DCDCHNVKALYRRAQAY 411 (437)
Q Consensus 395 ~~~p~~~~a~~~~g~~~ 411 (437)
+.+|+|..|.-.+..+-
T Consensus 102 ~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 102 QTEPQNNQAKELERLID 118 (126)
T ss_dssp HHCTTCHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHH
Confidence 99999998876655443
No 293
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.29 E-value=0.0012 Score=60.80 Aligned_cols=53 Identities=8% Similarity=-0.023 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHhCCCC
Q 013755 382 DYQGAIELCSKVLDCDCH--NVKALYRRAQAYMEI-----ADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 382 ~~~~Ai~~~~~al~~~p~--~~~a~~~~g~~~~~l-----g~~~~A~~~~~~al~l~P~n 434 (437)
...+|...+++|+++||+ +..+|..+|..|..+ |+.++|.++|++||+++|+.
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 468899999999999999 567999999999996 99999999999999999974
No 294
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.25 E-value=0.0033 Score=50.50 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=60.4
Q ss_pred HHHHHHhhHHHhCCc---HHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 319 GRKKEEGNLLFKNGK---YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
+..++.|..+.+..+ ..+++..+...++..|. .+..+++.||..++++|+|.+|+++++.+|+
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~--------------~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--------------RRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG--------------GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--------------hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 334445555555543 45788888887765432 2468899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHH
Q 013755 396 CDCHNVKALYRRAQAYM 412 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~~ 412 (437)
.+|+|..|.-.+..+--
T Consensus 107 ~eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 107 HERNNKQVGALKSMVED 123 (134)
T ss_dssp TCTTCHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 99999988766655543
No 295
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.24 E-value=0.0044 Score=50.44 Aligned_cols=79 Identities=14% Similarity=0.099 Sum_probs=60.1
Q ss_pred HHHHHHhhHHHhCCc---HHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 319 GRKKEEGNLLFKNGK---YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
+..++.|..+.+..+ -.+++.+++..++..|.. +..+++.||..++++++|.+|.++++.+|+
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~--------------~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--------------RRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST--------------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc--------------hhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 344555666666554 356888888877754321 457899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHH
Q 013755 396 CDCHNVKALYRRAQAY 411 (437)
Q Consensus 396 ~~p~~~~a~~~~g~~~ 411 (437)
.+|+|..|.-.+..+-
T Consensus 106 ~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 106 HERNNKQVGALKSMVE 121 (144)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHH
Confidence 9999988876555443
No 296
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.90 E-value=0.0044 Score=51.87 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=64.5
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChH--------HHHH--HHhhhHHHhhhHHHHHHhccCHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDD--------EQKL--VKSLRVSCWLNSAACCLKLKDYQG 385 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~--------~~~~--~~~~~~~~~~nla~~~~~~~~~~~ 385 (437)
..++.+.-.|+.+|..++|.+|...|++||............ -... ...--..+.+.+|.||.+++++.+
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 456778889999999999999999999999875432111000 0000 000113567889999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHH
Q 013755 386 AIELCSKVLDCDCHNVKALYRRAQAY 411 (437)
Q Consensus 386 Ai~~~~~al~~~p~~~~a~~~~g~~~ 411 (437)
|+...+.+ -..-..++....+|+.|
T Consensus 141 Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 141 AIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 99987553 22235677777777765
No 297
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.69 E-value=0.0017 Score=63.72 Aligned_cols=122 Identities=10% Similarity=0.021 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhc-cC---CCCChHHHHHHHh------hhHHHhhhHHHHHHhc
Q 013755 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS-ED---GSFVDDEQKLVKS------LRVSCWLNSAACCLKL 380 (437)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~-~~---~~~~~~~~~~~~~------~~~~~~~nla~~~~~~ 380 (437)
...-...+..+...|..+++.|+|++|++.|++|..... .. ......++...+. ....-+..+..+|.+.
T Consensus 141 A~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~ 220 (449)
T 1b89_A 141 AKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDR 220 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHC
Confidence 334456667778899999999999999999999932200 00 0000000000000 0001122456789999
Q ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HhccHHHHHHHHHHHHHhCC
Q 013755 381 KDYQGAIELCSKVLDCDCHNVKALYRRAQAYM--EIADLILAELDIKKAIEADP 432 (437)
Q Consensus 381 ~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~--~lg~~~~A~~~~~~al~l~P 432 (437)
|+|++|+..++++|.+++.+..++..+|.+|. +.++..++++.|...+.+.|
T Consensus 221 G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 221 GYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp TCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 99999999999999999999999999999886 45677777777766555444
No 298
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.49 E-value=0.01 Score=56.72 Aligned_cols=68 Identities=10% Similarity=-0.007 Sum_probs=56.7
Q ss_pred HHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCH
Q 013755 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNV 401 (437)
Q Consensus 322 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~ 401 (437)
...|..++..|++++|+..+++|+.++|+ ...|..+|.++...|++++|+..|++|+.++|...
T Consensus 281 ~alal~~l~~gd~d~A~~~l~rAl~Ln~s----------------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 281 QIKAVSALVKGKTDESYQAINTGIDLEMS----------------WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCCC----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 34566677789999999999999999743 24577889999999999999999999999999765
Q ss_pred HHHHH
Q 013755 402 KALYR 406 (437)
Q Consensus 402 ~a~~~ 406 (437)
.|+.
T Consensus 345 -t~~~ 348 (372)
T 3ly7_A 345 -TLYW 348 (372)
T ss_dssp -HHHH
T ss_pred -hHHH
Confidence 4433
No 299
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.04 Score=57.82 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=53.7
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKA 427 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 427 (437)
.++.-.+.-++..++|+-|+...++|....|.....|++++.||..+|+|+.|+-.++.+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 345556776778999999999999999999999999999999999999999999887766
No 300
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.79 E-value=0.053 Score=56.58 Aligned_cols=99 Identities=9% Similarity=-0.023 Sum_probs=72.4
Q ss_pred HHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhcc-CHHHHHHHHHHHHHhCCC
Q 013755 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK-DYQGAIELCSKVLDCDCH 399 (437)
Q Consensus 321 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~-~~~~Ai~~~~~al~~~p~ 399 (437)
+...++...+.+..+.|...|.+|++..+... ..+|...|....+.+ +++.|...|+++|+..|+
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~--------------~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~ 502 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT--------------PDIYLENAYIEYHISKDTKTACKVLELGLKYFAT 502 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC--------------THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC--------------hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC
Confidence 34444555566788999999999988733221 244556666655654 488888888888888888
Q ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Q 013755 400 NVKALYRRAQAYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 400 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
++..+...+......|+.+.|+..|++|+...|+
T Consensus 503 ~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 503 DGEYINKYLDFLIYVNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC
Confidence 8888777777777888888888888888887763
No 301
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.77 E-value=0.029 Score=58.52 Aligned_cols=82 Identities=17% Similarity=0.122 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHH
Q 013755 334 YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAI-ELCSKVLDCDCHNVKALYRRAQAYM 412 (437)
Q Consensus 334 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai-~~~~~al~~~p~~~~a~~~~g~~~~ 412 (437)
.+.....|++||..+|..+ .+|+..|..+...++.++|+ ..+++|+...|.+...++..+....
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~---------------~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee 389 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAP---------------EIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYE 389 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCH---------------HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCH---------------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3456678999999888754 67899999888899999997 9999999999999999999999999
Q ss_pred HhccHHHHHHHHHHHHHh
Q 013755 413 EIADLILAELDIKKAIEA 430 (437)
Q Consensus 413 ~lg~~~~A~~~~~~al~l 430 (437)
..|++++|.+.|++++..
T Consensus 390 ~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 390 LNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 999999999999999975
No 302
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.66 E-value=0.16 Score=49.12 Aligned_cols=98 Identities=14% Similarity=-0.020 Sum_probs=79.5
Q ss_pred HHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC---CC
Q 013755 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD---CH 399 (437)
Q Consensus 323 ~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~---p~ 399 (437)
..|..|+..|+|.+|+..+.+.++......+ ..+...++......|..++++.++...+.+|.... +.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 6889999999999999999999998755321 25567888889999999999999999999987653 12
Q ss_pred CH----HHHHHHHHHHH-HhccHHHHHHHHHHHHH
Q 013755 400 NV----KALYRRAQAYM-EIADLILAELDIKKAIE 429 (437)
Q Consensus 400 ~~----~a~~~~g~~~~-~lg~~~~A~~~~~~al~ 429 (437)
++ .....-|..++ ..++|..|-.+|-.+++
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 22 33556688888 89999999999998874
No 303
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.40 E-value=0.13 Score=42.25 Aligned_cols=92 Identities=11% Similarity=-0.006 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 013755 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEI 414 (437)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~l 414 (437)
++-+..|++|+...|.... ..++--+.+|.+.|.- ..+++.++|.+.|+.++.+....++.|...|+--...
T Consensus 36 ~rlrd~YerAia~~Pp~k~-------~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRq 107 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKY-------GQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQ 107 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGG-------TTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCcccc-------ccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 7788899999998875421 1223344566666644 6679999999999999999878888888888888899
Q ss_pred ccHHHHHHHHHHHHHhCCCC
Q 013755 415 ADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 415 g~~~~A~~~~~~al~l~P~n 434 (437)
|+...|+..+.+|+.+.|..
T Consensus 108 gnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 108 GNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp TCHHHHHHHHHHHHHTTCBC
T ss_pred ccHHHHHHHHHHHhccCCCc
Confidence 99999999999999998854
No 304
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.95 E-value=0.17 Score=42.33 Aligned_cols=89 Identities=18% Similarity=0.106 Sum_probs=65.6
Q ss_pred HhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH--h--C--
Q 013755 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD--C--D-- 397 (437)
Q Consensus 324 ~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~--~--~-- 397 (437)
.+..+|-.|.|.+|+-++.+ .. -+...+--+.||.++++|.+|+...++.|+ . |
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~-------lN-------------T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~ 98 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHK-------LN-------------TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPD 98 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-------CC-------------BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCC
T ss_pred hhhhhhhcchHhHHHHHHHh-------cc-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc
Confidence 45566777777666654432 11 135566788999999999999999999993 2 2
Q ss_pred -----------CCCHH-HHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 398 -----------CHNVK-ALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 398 -----------p~~~~-a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
|.+.. .+..+|..+...|+-++|+.+|......+|
T Consensus 99 ~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 99 VDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp CCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred cccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 33333 355679999999999999999999888765
No 305
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=94.74 E-value=0.056 Score=53.12 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=45.1
Q ss_pred CccEEeecCCCCCCCeEEEcCCCCcchHHHHHhcccccCcEEEEEEcCCCCCCccccccccccCCCCceEEEEEEEeeee
Q 013755 222 DGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (437)
Q Consensus 222 ~g~~fd~~~~~~~~p~~f~lg~~~~~~gl~~~l~~m~~GE~~~i~i~~~~~yg~~~~~~~~~~ip~~~~l~~~vel~~~~ 301 (437)
||..|+++ .+.++.|.+|.+. + |+.+|.+|++||...|.+.. +|.+..|.|.|..+.
T Consensus 170 dG~~~~~~---~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-----------------aGk~a~F~VtV~~Ik 226 (433)
T 3gty_X 170 EEGKKLTS---REYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-----------------EGKKYTYKLEVEEVY 226 (433)
T ss_dssp TTSCEEEE---EEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE-----------------TTEEEEEEEEEEEEE
T ss_pred CCEECcCC---CCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee-----------------CCCeEEEEEEEEEEE
Confidence 55556543 2357778888776 4 99999999999999999842 356789999999997
Q ss_pred cc
Q 013755 302 KE 303 (437)
Q Consensus 302 ~~ 303 (437)
..
T Consensus 227 ~~ 228 (433)
T 3gty_X 227 KR 228 (433)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 306
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=94.74 E-value=0.26 Score=45.68 Aligned_cols=115 Identities=15% Similarity=0.137 Sum_probs=71.4
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhh-hHHHHHHhc--cC-----HHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWL-NSAACCLKL--KD-----YQGAIEL 389 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-nla~~~~~~--~~-----~~~Ai~~ 389 (437)
.......|..++..|+|++|+..|+.+|...+-....+.++..+++++...+.- -+|.- +.+ .+ .+...+.
T Consensus 102 l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~-iEl~Rr~l~~~~~~~~kR~ 180 (320)
T 3mkr_B 102 LIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLS-METERKKLPKETLEQQKRI 180 (320)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccCCchhHHHH
Confidence 334568899999999999999999999999886655555666666666554432 23322 122 11 1222222
Q ss_pred HHHHH-----HhCCCCHHHHHHHHH-HHHHhccHHHHHHHHHHHHHhCCC
Q 013755 390 CSKVL-----DCDCHNVKALYRRAQ-AYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 390 ~~~al-----~~~p~~~~a~~~~g~-~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
++-+- .+.|.+...-.|.|. ..++.++|..|...-++.|++.|+
T Consensus 181 lELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 181 CEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 22221 234444333334443 456788999998888888888774
No 307
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.13 Score=50.50 Aligned_cols=98 Identities=12% Similarity=0.020 Sum_probs=78.4
Q ss_pred HHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC--C
Q 013755 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD--C 398 (437)
Q Consensus 321 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~--p 398 (437)
+...|..+++.|+++.|+..|.++........ .+..+++++..+++..++|..+..++.++..+- .
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~------------~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~ 201 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTG------------AKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKG 201 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC------------SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH------------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcC
Confidence 45789999999999999999999988765432 246778888999999999999999999987652 1
Q ss_pred CCH----HHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 399 HNV----KALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 399 ~~~----~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
.++ +.....|.++...++|.+|-..|..++.-
T Consensus 202 ~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 202 GDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp CCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 222 34455677888899999999999887754
No 308
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=94.56 E-value=0.18 Score=46.79 Aligned_cols=118 Identities=11% Similarity=0.036 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhh-hHHHHHHhccCH----HHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWL-NSAACCLKLKDY----QGAIEL 389 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-nla~~~~~~~~~----~~Ai~~ 389 (437)
+.........|..++..|+|++|+..|+.+|...+-..-.+.++..+++++...+.- -+|.- +.+.+- +...+.
T Consensus 111 l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~-iEl~Rr~l~~~~~kR~ 189 (325)
T 3mv2_A 111 LDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLS-IELERRSLKEGNTVRM 189 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHH-HHHHHHTCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCcccHHHH
Confidence 334444566899999999999999999999999876544444555555555544322 22322 111110 111111
Q ss_pred HHHH-----HHhCCCCHHHHHHHHH-HHHHhccHHHHHHHHHHHHHhCCC
Q 013755 390 CSKV-----LDCDCHNVKALYRRAQ-AYMEIADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 390 ~~~a-----l~~~p~~~~a~~~~g~-~~~~lg~~~~A~~~~~~al~l~P~ 433 (437)
++-| ..+.|.+-..-.|.|. ..++.++|..|...-++.|++.|+
T Consensus 190 lELAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 239 (325)
T 3mv2_A 190 LELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISS 239 (325)
T ss_dssp HHHHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 2211 1223333333333333 346778888888888888888774
No 309
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.37 E-value=0.39 Score=43.45 Aligned_cols=96 Identities=11% Similarity=-0.064 Sum_probs=77.1
Q ss_pred hhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHH-
Q 013755 325 GNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKA- 403 (437)
Q Consensus 325 g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a- 403 (437)
...+++.|+.++|+......++..|.+. .+...+-..+.-.|+|++|.+.++.+.+++|.....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da---------------~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDA---------------SLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCH---------------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 3567899999999999999999988764 445566777778999999999999999999986422
Q ss_pred ----------------------------------HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 404 ----------------------------------LYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 404 ----------------------------------~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
....+......|+.++|.+.-.+|++..|..+
T Consensus 69 ~~yr~lI~aE~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~~ 134 (273)
T 1zbp_A 69 SQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKG 134 (273)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcccC
Confidence 23345556667899999999999999888654
No 310
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.71 E-value=1.1 Score=43.97 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=79.9
Q ss_pred HHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 316 ~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
+++......+..++..|+|.+|.........-.-.. .+ ...+..+++.....|+..++|.+|...++++..
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~--~~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGS--ME-------MSEKIQFILEQMELSILKGDYSQATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS--SC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--cc-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 345556778999999999999999998876532211 11 234567778888899999999999999999742
Q ss_pred ---hCCCCH----HHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 396 ---CDCHNV----KALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 396 ---~~p~~~----~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
-.+.++ ..+...|..+...++|.+|-.+|..++..
T Consensus 206 ~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 206 KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 233333 45677788999999999999999988753
No 311
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.68 E-value=0.12 Score=54.20 Aligned_cols=59 Identities=24% Similarity=0.372 Sum_probs=52.4
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
.+..++..+..+|+|+.|+.+-++|+.+.|... .+|+.||.||.++|+|+.|+-..+.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF---------------~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSF---------------ESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhh---------------HHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 566778889999999999999999999998764 77999999999999999999776654
No 312
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.05 E-value=0.29 Score=44.32 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=55.9
Q ss_pred HHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Q 013755 375 ACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEADPQN 434 (437)
Q Consensus 375 ~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n 434 (437)
..+++.++.++|+..+...++.+|.|++.-..+-+.+.-.|+|+.|...++.+.+++|+.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~ 64 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEY 64 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchh
Confidence 356788999999999999999999999999999999999999999999999999999964
No 313
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.88 E-value=0.27 Score=49.08 Aligned_cols=66 Identities=9% Similarity=-0.035 Sum_probs=59.8
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
...++.+||....-...+..|..+|.+|+.+.|++...|..+|.+....+++-+|+-+|-++|...
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~ 216 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVK 216 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcC
Confidence 345778889988888899999999999999999999999999999999999999999999998643
No 314
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=92.68 E-value=0.88 Score=45.38 Aligned_cols=114 Identities=11% Similarity=-0.037 Sum_probs=77.4
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCCh--------HHH-HHHH----------------hhhHHHhhhHH
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD--------DEQ-KLVK----------------SLRVSCWLNSA 374 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--------~~~-~~~~----------------~~~~~~~~nla 374 (437)
.+...+..+...|+.++|...|++|+.. |....+.- ++. ..+. .....+|...+
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 3455566677889999999999999999 76532100 000 0000 11124566666
Q ss_pred HHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhCCCCC
Q 013755 375 ACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIA-DLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 375 ~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~P~n~ 435 (437)
....+.++.+.|...|.+| ...+.....|...|..-...+ +.+.|...|+++++..|+++
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~ 354 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDST 354 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCH
Confidence 6666788899999999999 433335566666666666666 59999999999999888754
No 315
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.69 E-value=0.98 Score=45.02 Aligned_cols=80 Identities=15% Similarity=0.054 Sum_probs=69.5
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC 398 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p 398 (437)
..+...|+..-....+..|...|.+|+.+.|... ..|+.||.++...+++-+|+-+|.++|....
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G---------------~~~nqLavla~~~~~~l~a~y~y~rsl~~~~ 217 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNG---------------QPYNQLAILASSKGDHLTTIFYYCRSIAVKF 217 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBS---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHSSSB
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCC---------------chHHHHHHHHhcccccHHHHHHHHHHHhcCC
Confidence 4567889999999999999999999999999875 6699999999999999999999999998776
Q ss_pred CCHHHHHHHHHHHHH
Q 013755 399 HNVKALYRRAQAYME 413 (437)
Q Consensus 399 ~~~~a~~~~g~~~~~ 413 (437)
..+.|.-++...+..
T Consensus 218 Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 218 PFPAASTNLQKALSK 232 (497)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHH
Confidence 678777777776654
No 316
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.37 E-value=2.9 Score=41.72 Aligned_cols=95 Identities=9% Similarity=0.010 Sum_probs=75.2
Q ss_pred HHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC-CC
Q 013755 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD-CH 399 (437)
Q Consensus 321 ~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~-p~ 399 (437)
+...-..+.+.|++++|...|++.....- .+ ....|+.+-.+|.+.|++++|.+.+++..+.. .-
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~-~P-------------d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P 173 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGI-QP-------------RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP 173 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTC-CC-------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCC-CC-------------ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC
Confidence 34455678899999999999998776421 11 13567778888999999999999999987653 22
Q ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 400 NVKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 400 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
+...|..+-.+|.+.|++++|.+.|++.-+
T Consensus 174 d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 174 EEPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 577888999999999999999999998754
No 317
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.58 E-value=0.65 Score=33.97 Aligned_cols=39 Identities=26% Similarity=0.119 Sum_probs=34.0
Q ss_pred ChHH-HHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhh
Q 013755 310 NNQG-KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (437)
Q Consensus 310 ~~~~-~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 348 (437)
+... .+..+..+..+|...=+.|+|++|+.+|.+|++.+
T Consensus 2 ~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 41 (83)
T 2v6y_A 2 SAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVL 41 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4444 67788899999999999999999999999999975
No 318
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=89.78 E-value=2.4 Score=40.77 Aligned_cols=114 Identities=16% Similarity=0.070 Sum_probs=79.1
Q ss_pred HHHHHHHHhhHHHhCCcHHHHHHHHHHHHHh-------------------hccCCCCChHH---------HH---HHHhh
Q 013755 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADC-------------------VSEDGSFVDDE---------QK---LVKSL 365 (437)
Q Consensus 317 ~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~-------------------~~~~~~~~~~~---------~~---~~~~~ 365 (437)
.-....+.|..|.+.|++++-..+....... ....+...+.+ |. ...-+
T Consensus 18 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~fl 97 (394)
T 3txn_A 18 KEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFL 97 (394)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778899999999988877766554332 22222221111 11 11222
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCH------NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+..+-.+||..|+..|+|.+|+..+.+.++.-.. ....+....+.|..++++.++.+.|.+|...
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 3344558899999999999999999998874221 1466788899999999999999999999765
No 319
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=89.23 E-value=2 Score=42.82 Aligned_cols=92 Identities=12% Similarity=-0.077 Sum_probs=66.6
Q ss_pred HHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhcc-CHHHHHHHHHHHHHhCC
Q 013755 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK-DYQGAIELCSKVLDCDC 398 (437)
Q Consensus 320 ~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~-~~~~Ai~~~~~al~~~p 398 (437)
.+..-+....+.+..+.|...|.+| . .|.. . ..+|...|..-+..+ +.+.|...|+++++..|
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~---~-----------~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~ 351 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-G-NEGV---G-----------PHVFIYCAFIEYYATGSRATPYNIFSSGLLKHP 351 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-T-TSCC---C-----------HHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-h-CCCC---C-----------hHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCC
Confidence 3444555555677899999999999 3 3321 1 245555666665556 59999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 013755 399 HNVKALYRRAQAYMEIADLILAELDIKKA 427 (437)
Q Consensus 399 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 427 (437)
+++..+...+.-...+|+.+.|...|+++
T Consensus 352 ~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 352 DSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 88877777777777788888888777775
No 320
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=88.24 E-value=1.2 Score=34.91 Aligned_cols=43 Identities=21% Similarity=0.177 Sum_probs=36.3
Q ss_pred CCCChH-HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhc
Q 013755 307 WEMNNQ-GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (437)
Q Consensus 307 ~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~ 349 (437)
.+|+.. ..+..+..+..+|...=..++|++|+.+|..|++++-
T Consensus 6 ~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 6 SGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp CCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 345555 6778889999999999999999999999999999753
No 321
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=86.18 E-value=1.3 Score=32.27 Aligned_cols=40 Identities=25% Similarity=0.155 Sum_probs=34.7
Q ss_pred CCh-HHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhh
Q 013755 309 MNN-QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (437)
Q Consensus 309 ~~~-~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 348 (437)
|++ ...++.+..+..+|...=+.|+|++|+.+|.+|++.+
T Consensus 9 ~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 49 (83)
T 2w2u_A 9 MSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVL 49 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 444 4567889999999999999999999999999999975
No 322
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=85.29 E-value=3.4 Score=34.87 Aligned_cols=28 Identities=11% Similarity=-0.056 Sum_probs=22.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAA 345 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al 345 (437)
...++..|...+..|+++-|..+|+++=
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 4467888888888888888888888763
No 323
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=84.59 E-value=7.3 Score=36.40 Aligned_cols=112 Identities=11% Similarity=0.049 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHH-HHHHHHhhccCCCCChHHHH--------HH-HhhhHHHhhhHHHHHHhccC
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKK-YNKAADCVSEDGSFVDDEQK--------LV-KSLRVSCWLNSAACCLKLKD 382 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~-y~~al~~~~~~~~~~~~~~~--------~~-~~~~~~~~~nla~~~~~~~~ 382 (437)
+..+.-+.++..++.|.++++|++|+.+ |.-|+.++.........+.. +. .+.......++..++.....
T Consensus 30 ~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~ 109 (336)
T 3lpz_A 30 EQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQP 109 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCT
T ss_pred cccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCC
Confidence 4467778888899999999999999997 45555544331100000000 00 00000111222333222221
Q ss_pred H-HHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHhccHHHHHHHH
Q 013755 383 Y-QGAIELCSKVLDC-------DCHNVKALYRRAQAYMEIADLILAELDI 424 (437)
Q Consensus 383 ~-~~Ai~~~~~al~~-------~p~~~~a~~~~g~~~~~lg~~~~A~~~~ 424 (437)
- ..=....++++.+ .-.++..+..+|..|.+.++|.+|..+|
T Consensus 110 ~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 110 GEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 0 0112233333332 2246788888999999999999998887
No 324
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=84.59 E-value=5.9 Score=39.40 Aligned_cols=85 Identities=9% Similarity=-0.017 Sum_probs=66.4
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHH
Q 013755 332 GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD-CHNVKALYRRAQA 410 (437)
Q Consensus 332 g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~-p~~~~a~~~~g~~ 410 (437)
+..++|.+.|.+.....- .+ ....|+.+-.+|.+.|++++|+..+++..+.. .-+...|..+-.+
T Consensus 84 ~~l~~A~~lf~~M~~~G~-~P-------------d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~ 149 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKV-VP-------------NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFG 149 (501)
T ss_dssp HHHHHHHHHHHHHHHTTC-CC-------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCC-CC-------------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHH
Confidence 457788888887665321 11 13568888889999999999999999987652 2367888888899
Q ss_pred HHHhccHHHHHHHHHHHHHh
Q 013755 411 YMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 411 ~~~lg~~~~A~~~~~~al~l 430 (437)
|.+.|++++|.+.|++..+.
T Consensus 150 ~~~~g~~~~A~~l~~~M~~~ 169 (501)
T 4g26_A 150 FCRKGDADKAYEVDAHMVES 169 (501)
T ss_dssp HHHTTCHHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHHHhc
Confidence 99999999999999987753
No 325
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.30 E-value=2.2 Score=44.67 Aligned_cols=59 Identities=24% Similarity=0.236 Sum_probs=38.4
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHH--------HHhCCCCHHHHHHHHH-------------HHHHhccHHHHHHHHHH
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKV--------LDCDCHNVKALYRRAQ-------------AYMEIADLILAELDIKK 426 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~a--------l~~~p~~~~a~~~~g~-------------~~~~lg~~~~A~~~~~~ 426 (437)
..|.++|..+.+.++++.|+.+|.++ |.....+.+.+-.++. +++.+|++++|++.|.+
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 56888999999999999999998875 1122344444433333 45556666666666544
No 326
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.00 E-value=1.9 Score=42.90 Aligned_cols=68 Identities=18% Similarity=0.072 Sum_probs=56.9
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCC
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHN-------VKALYRRAQAYMEIADLILAELDIKKAIEADPQNR 435 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 435 (437)
.+.+++-+=..|+..+.|++|.....++. .|.+ ...+|..|.++.-.++|.+|.++|..|+...|.+.
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 35667777888999999999999999985 3322 46678899999999999999999999999888664
No 327
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=83.87 E-value=1.7 Score=31.74 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=34.1
Q ss_pred CChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhh
Q 013755 309 MNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (437)
Q Consensus 309 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 348 (437)
|+....+..+..+..+|...=..|+|++|+.+|..|++.+
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l 43 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYL 43 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4444567788889999999999999999999999999975
No 328
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.08 E-value=6.6 Score=30.36 Aligned_cols=74 Identities=9% Similarity=-0.001 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhcc-------CCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHH
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE-------DGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQG 385 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~-------~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~ 385 (437)
...+.+..+.+.|...=..|+-+.|+.+|++.+..+.. .+....+.|+..+.+......||..+..+++....
T Consensus 17 ~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~ 96 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEK 96 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566777777777777789999999999988886532 22345688999999999989999988877765544
Q ss_pred H
Q 013755 386 A 386 (437)
Q Consensus 386 A 386 (437)
.
T Consensus 97 ~ 97 (116)
T 2dl1_A 97 G 97 (116)
T ss_dssp H
T ss_pred c
Confidence 3
No 329
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=82.04 E-value=5.6 Score=29.55 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhc
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~ 349 (437)
..+..+..+...|...=+.|+|++|+.+|..|++.+-
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3456788889999999999999999999999999763
No 330
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=81.81 E-value=4.8 Score=38.56 Aligned_cols=63 Identities=6% Similarity=-0.026 Sum_probs=52.4
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
...+...+..+...|++.+|+..+.+++...|.+. .++..+-.+|...|+..+|+..|+++-.
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E---------------~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYRE---------------PLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34556677888999999999999999999987653 4677888899999999999999988643
No 331
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.72 E-value=2.5 Score=46.88 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=73.4
Q ss_pred HHHhhHHHhCCcHHHHHHHHHHHHHhhccCCC-CC-hHHHHHH------HhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGS-FV-DDEQKLV------KSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 322 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~-~~-~~~~~~~------~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
+-+|..++..|++++|..+|++|..-...... .. ......+ .......|+.+...+.+.+.++.+++....|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 66889999999999999999998543322111 11 0111111 1223356777788888899999999999999
Q ss_pred HHhCCCC-H----HHHHHHHHHHHHhccHHHHHHHHH
Q 013755 394 LDCDCHN-V----KALYRRAQAYMEIADLILAELDIK 425 (437)
Q Consensus 394 l~~~p~~-~----~a~~~~g~~~~~lg~~~~A~~~~~ 425 (437)
|+..+.+ . ..|.++=+++..+++|++|-..+.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 9876433 2 257788899999999999976664
No 332
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=80.70 E-value=4.6 Score=29.58 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhh
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 348 (437)
...+..+..+|..+=+.|+|++|+.+|..|++.+
T Consensus 13 ~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~l 46 (86)
T 4a5x_A 13 STAAATVLKRAVELDSESRYPQALVCYQEGIDLL 46 (86)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3567778889999999999999999999999875
No 333
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.22 E-value=6.6 Score=40.98 Aligned_cols=26 Identities=12% Similarity=0.157 Sum_probs=22.9
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHH
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKA 344 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~a 344 (437)
..++..|..+.+.++++.|+++|.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45678899999999999999999986
No 334
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.91 E-value=3.1 Score=40.58 Aligned_cols=65 Identities=12% Similarity=0.139 Sum_probs=56.2
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCH---NVKALYRRAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~---~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
.++..+|..|++.|+++.|++.|.++...... -...++..-.++...++|..+...++++..+-.
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~ 199 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE 199 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Confidence 46789999999999999999999999876432 257888999999999999999999999987643
No 335
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=78.07 E-value=29 Score=29.00 Aligned_cols=115 Identities=11% Similarity=-0.025 Sum_probs=76.7
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhh-ccCCCCChHHHHHH---HhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCV-SEDGSFVDDEQKLV---KSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~-~~~~~~~~~~~~~~---~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
+...+-....+.+.++|.+|+...+..|.-. ..+++.+. +.+.. ....--.++-+|..+.+.|+-++|+.++...
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~-~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDA-RIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCH-HHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccc-ccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhh
Confidence 4455667788999999999999999998422 11221110 00000 0001123556788899999999999999987
Q ss_pred HHhCCCCH------------------------------------------------------------HHHHHHHHHHHH
Q 013755 394 LDCDCHNV------------------------------------------------------------KALYRRAQAYME 413 (437)
Q Consensus 394 l~~~p~~~------------------------------------------------------------~a~~~~g~~~~~ 413 (437)
...+|-.+ -..-+.|.-|+.
T Consensus 141 f~~~~lf~~vEnliyeN~vp~~~d~~~i~~~~~~~i~~~y~~d~~~lHe~~s~~~ikkY~n~iPGiGSY~va~aa~~yf~ 220 (242)
T 3kae_A 141 FGKSFLFSPVENLLLENKVPQKRDKENVRQTGRRGIEEEYVSDSIEFHESLSPSLVKKYMEHVPGIGSYFISNAARRYFN 220 (242)
T ss_dssp HHHCCCHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTHHHHHHHHHHHHHHH
T ss_pred cCCccccchHHHHHhhcCCCcccchHHHHhhhhccchhhhhhhHHHHHHhccHHHHHHHHHhCCCchhHHHHHHHHHHHh
Confidence 76654211 001345677899
Q ss_pred hccHHHHHHHHHHHHHhCCC
Q 013755 414 IADLILAELDIKKAIEADPQ 433 (437)
Q Consensus 414 lg~~~~A~~~~~~al~l~P~ 433 (437)
+|-.++..+.|...-..||.
T Consensus 221 lg~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 221 LGMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp TTCHHHHHHHHHHHHHHSTT
T ss_pred cccchhHHHHHHHHHhcCCC
Confidence 99999999999999999885
No 336
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=78.04 E-value=11 Score=30.34 Aligned_cols=60 Identities=18% Similarity=0.052 Sum_probs=40.1
Q ss_pred hhhHHHHHH-hccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 370 WLNSAACCL-KLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 370 ~~nla~~~~-~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
|.++|.-++ .+|+-++--+.+...+.-++-++..++.+|.||.++|+..+|-+.+++|-+
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 344444322 344444433334343444566799999999999999999999999999875
No 337
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=78.02 E-value=4.5 Score=29.81 Aligned_cols=38 Identities=32% Similarity=0.417 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhcc
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 350 (437)
..+..+..+-.++..+.+.|+|++||.+.++|..++..
T Consensus 10 spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 10 GPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 34556888888999999999999999999999988754
No 338
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=77.69 E-value=6 Score=32.38 Aligned_cols=72 Identities=11% Similarity=0.046 Sum_probs=56.7
Q ss_pred HhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 013755 329 FKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRA 408 (437)
Q Consensus 329 ~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g 408 (437)
...++.++|.+.|+.|+.. ...+ +.+|...|.--.++|+..+|.+.+.+|+.+.|.. +-++..|
T Consensus 71 ~ei~D~d~aR~vy~~a~~~---hKkF------------AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~-~~~le~a 134 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARAN---CKKF------------AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP-LEMLEIA 134 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHH---CTTB------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC-HHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHH---hHHH------------HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc-HHHHHHH
Confidence 3447899999999999986 3222 6788888888889999999999999999999874 4455666
Q ss_pred HHHHHhcc
Q 013755 409 QAYMEIAD 416 (437)
Q Consensus 409 ~~~~~lg~ 416 (437)
..-++.|.
T Consensus 135 ~~nl~~~~ 142 (161)
T 4h7y_A 135 LRNLNLQK 142 (161)
T ss_dssp HHHHHTTC
T ss_pred HHhhhcCC
Confidence 66666554
No 339
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=77.12 E-value=3 Score=40.91 Aligned_cols=103 Identities=5% Similarity=-0.031 Sum_probs=66.1
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCChHHH-HHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC--------CC--C
Q 013755 332 GKYERAGKKYNKAADCVSEDGSFVDDEQ-KLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD--------CH--N 400 (437)
Q Consensus 332 g~~~~A~~~y~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~--------p~--~ 400 (437)
...+.|.+...++....-.+...+.++. ..-+....-+.+++-.+|+++++...|...+...-... |. .
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 4567788888888877544332111000 01122222334566789999999988877664332221 11 1
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh-CCCC
Q 013755 401 VKALYRRAQAYMEIADLILAELDIKKAIEA-DPQN 434 (437)
Q Consensus 401 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l-~P~n 434 (437)
+..+|.+|..++..++|.+|.++|..|+.. .|.+
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 366899999999999999999999999998 6654
No 340
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=75.17 E-value=7.5 Score=32.72 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=33.9
Q ss_pred HhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 013755 378 LKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKA 427 (437)
Q Consensus 378 ~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 427 (437)
+++|+++.|.+.+++. ++..-|-++|...+..|+++-|..+|.++
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 4678888887776654 56777888888888888888888877765
No 341
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=73.92 E-value=48 Score=30.50 Aligned_cols=111 Identities=10% Similarity=-0.036 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHH-HHHHHHhhccCCCCChHHH-----HHH----HhhhHHHhhhHHHHHHhccCH-
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKK-YNKAADCVSEDGSFVDDEQ-----KLV----KSLRVSCWLNSAACCLKLKDY- 383 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~-y~~al~~~~~~~~~~~~~~-----~~~----~~~~~~~~~nla~~~~~~~~~- 383 (437)
.+.-+.++...+.|.++++|++|+.. |.-|+.+..........+. +.. .........++..++.....-
T Consensus 30 YEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~ 109 (312)
T 2wpv_A 30 YEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSE 109 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCC
Confidence 34556677788889999999999998 4455544433110000000 000 000001111222222221110
Q ss_pred HHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHhccHHHHHHHHH
Q 013755 384 QGAIELCSKVLDCD-------CHNVKALYRRAQAYMEIADLILAELDIK 425 (437)
Q Consensus 384 ~~Ai~~~~~al~~~-------p~~~~a~~~~g~~~~~lg~~~~A~~~~~ 425 (437)
..-.+..++++... -.++..+..+|..|.+-+++.+|..+|-
T Consensus 110 ~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 110 PNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp TTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 11134444444431 2467889999999999999999999874
No 342
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=71.53 E-value=41 Score=36.48 Aligned_cols=99 Identities=6% Similarity=-0.104 Sum_probs=74.3
Q ss_pred HHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHh--
Q 013755 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDC-- 396 (437)
Q Consensus 319 ~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~-- 396 (437)
..+...=+.|.+.|+.++|...|.+.-+........ ....|+-+-..|.+.|++++|++.+++..+.
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-----------dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~ 196 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-----------TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGL 196 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-----------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-----------CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC
Confidence 356667778999999999999997754331100000 1466888888999999999999999998764
Q ss_pred CCCCHHHHHHHHHHHHHhcc-HHHHHHHHHHHHH
Q 013755 397 DCHNVKALYRRAQAYMEIAD-LILAELDIKKAIE 429 (437)
Q Consensus 397 ~p~~~~a~~~~g~~~~~lg~-~~~A~~~~~~al~ 429 (437)
.| |.-.|.-+=.++.+.|+ .++|.+.|++...
T Consensus 197 ~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 197 TP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp CC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45 67778778788888887 4788888887664
No 343
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=70.63 E-value=8 Score=27.27 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhcc
Q 013755 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (437)
Q Consensus 312 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 350 (437)
+++..-.......|..+...|++++|+.+|.+|+...+.
T Consensus 11 e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 11 EAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 344455666678999999999999999999999998765
No 344
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=70.12 E-value=12 Score=38.27 Aligned_cols=54 Identities=13% Similarity=0.035 Sum_probs=45.0
Q ss_pred HHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 376 CCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 376 ~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
..++.++|..|...+.+.-.......++.|.+|.++..+|+.++|...|+++..
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 345679999999999775554445688999999999999999999999998874
No 345
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=69.68 E-value=7.5 Score=28.61 Aligned_cols=26 Identities=23% Similarity=0.111 Sum_probs=15.0
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
..+..+|..+++.|+|++||.+..+|
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 34445555566666666666665554
No 346
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=68.69 E-value=37 Score=27.90 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=52.0
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHh-hhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCW-LNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~-~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
...-...|..+|..|+|-+|-+.++.+-...+... ++. .-++.-+. +..|..+.+.|++.-|...+.+++..
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~----~er---~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN----TES---KFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS----HHH---HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCc----hHH---HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 34457788999999999999999999887654321 111 12233344 55667788899999999999999874
No 347
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.05 E-value=29 Score=33.79 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
...++.+..+...++..++|.+|...++++.......... ..++...+...|..+...++|.+|..+|..++
T Consensus 174 ~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~--------~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~ 245 (445)
T 4b4t_P 174 SEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKY--------ESLKLEYYNLLVKISLHKREYLEVAQYLQEIY 245 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCc--------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3446666778888999999999999999986433222211 24566778888999999999999999999887
Q ss_pred Hh
Q 013755 395 DC 396 (437)
Q Consensus 395 ~~ 396 (437)
..
T Consensus 246 ~~ 247 (445)
T 4b4t_P 246 QT 247 (445)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 348
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=64.97 E-value=15 Score=27.39 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=34.7
Q ss_pred ChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhcc
Q 013755 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (437)
Q Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 350 (437)
+.+++..-.......|..++..|+++.|+.+|.+|+...+.
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 34556666777889999999999999999999999998765
No 349
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=63.89 E-value=30 Score=25.19 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhh
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 348 (437)
...+..+...|..+|+.++|.+|..+|+++...-
T Consensus 50 e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 50 EKKARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 3678889999999999999999999999998764
No 350
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=58.87 E-value=12 Score=39.64 Aligned_cols=66 Identities=27% Similarity=0.415 Sum_probs=48.3
Q ss_pred CCCCCCCEEEEEEEEEEc-CCcEE-e--c-------------cc-----------CCCCCeEEEeCCccccccHHHHhcc
Q 013755 60 DTPEFGDEVTIHYVGTLL-DGTKF-D--S-------------TR-----------DRYDPLTFKLGTGQVATGLDNGIIT 111 (437)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~-~G~~~-~--s-------------t~-----------~~~~p~~~~~g~~~~~~g~~~~l~~ 111 (437)
..|..|+.|.|.|+..+. +|.-- + | .| +....+.|.+|.+.+.+-++..|..
T Consensus 559 ~~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~q 638 (950)
T 3htx_A 559 QSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQ 638 (950)
T ss_dssp -CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTT
T ss_pred eccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeee
Confidence 456899999999999886 33211 0 0 00 0124589999999999999999999
Q ss_pred ccCCceEEEEEecC
Q 013755 112 MKKRECAVFTFTLP 125 (437)
Q Consensus 112 m~~G~~~~~~~~ip 125 (437)
|.+|++..|....|
T Consensus 639 ms~gqT~~F~~~~P 652 (950)
T 3htx_A 639 MTVGEYASFKMTPP 652 (950)
T ss_dssp CCTTCEEEEEESSC
T ss_pred ccccceeEEeccCc
Confidence 99999999855566
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=58.16 E-value=40 Score=36.31 Aligned_cols=93 Identities=10% Similarity=0.063 Sum_probs=60.9
Q ss_pred HHHhhHHHhCCcHHHHHHHHHHHHHhhccCC-CCCh-HHHHH------HHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SFVD-DEQKL------VKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 322 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~-~~~~-~~~~~------~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
+-+|..++..|++++|..+|++|-.-..... .... ..... ........|+..+..+.+.+-|+.+++.++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 5689999999999999999999865432211 1111 11111 11223447788888999999999999999999
Q ss_pred HHh-CCCCHH----HHHHHHHHHHHh
Q 013755 394 LDC-DCHNVK----ALYRRAQAYMEI 414 (437)
Q Consensus 394 l~~-~p~~~~----a~~~~g~~~~~l 414 (437)
|+. .+++.. .+.++=+++..+
T Consensus 924 I~~~~~dd~~l~~~l~~r~f~~a~a~ 949 (950)
T 4gq2_M 924 DASKETDDEDLSIAITHETLKTACAA 949 (950)
T ss_dssp HHTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccCCccchHHHHHHHHHHHhhC
Confidence 975 444443 455554444443
No 352
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=55.22 E-value=46 Score=24.29 Aligned_cols=67 Identities=13% Similarity=0.008 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhHHHhC---CcHHHHHHHHHHHHHhhcc----CCCCChHHHHHHHhhhHHHhhhHHHHHHhc
Q 013755 314 KIEAAGRKKEEGNLLFKN---GKYERAGKKYNKAADCVSE----DGSFVDDEQKLVKSLRVSCWLNSAACCLKL 380 (437)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~---g~~~~A~~~y~~al~~~~~----~~~~~~~~~~~~~~~~~~~~~nla~~~~~~ 380 (437)
..+.+-.+.+.|...=.. |+-++|+.+|++.+.-+.. ...-..++|+..+.+...-..||..+..++
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777776666 8888888888888775432 111245778888888877777777765544
No 353
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=55.09 E-value=24 Score=23.07 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhc
Q 013755 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (437)
Q Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~ 349 (437)
+..+.+..++.+-.-|...+.-.+...|++.+++||+++.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 3456788899999999999999999999999999998863
No 354
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=54.98 E-value=19 Score=37.05 Aligned_cols=52 Identities=15% Similarity=0.129 Sum_probs=46.3
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHH
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLIL 419 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~ 419 (437)
......|...+..|+|.-|.+.++.++..+|+|..|...++.+|.++|.-.+
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 4566788888999999999999999999999999999999999999985433
No 355
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=53.90 E-value=48 Score=24.46 Aligned_cols=63 Identities=17% Similarity=0.057 Sum_probs=44.3
Q ss_pred HHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 322 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
...|..+|..|+|-+|-+.++.+-...+. ++ ..-++.-+....|..+.+.|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~------~~---~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATG------EE---RRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCH------HH---HHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCC------ch---HHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 45788899999999999999998876532 11 1122333344556667678887 8899999876
No 356
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=53.82 E-value=49 Score=24.09 Aligned_cols=54 Identities=13% Similarity=0.193 Sum_probs=38.1
Q ss_pred HHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCC--HHHH-HHHHHHHHH
Q 013755 360 KLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHN--VKAL-YRRAQAYME 413 (437)
Q Consensus 360 ~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~--~~a~-~~~g~~~~~ 413 (437)
+-+.+-.+..+..-|.-+++.++|.+|+..++++..+..+- -+.+ |.++.|..+
T Consensus 46 ~ll~e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kk 102 (106)
T 2vkj_A 46 ELLKEKKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKK 102 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 34455556667777888999999999999999998764321 2334 667776544
No 357
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=53.22 E-value=45 Score=32.63 Aligned_cols=24 Identities=33% Similarity=0.207 Sum_probs=11.7
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHh
Q 013755 407 RAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 407 ~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
.|.-....|..++|...-.+|-++
T Consensus 493 ~AA~k~~yG~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 493 NAARKALNGDLEQAKIDAEKAKEY 516 (526)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCccHHHHHHHHHHHHH
Confidence 333344455555555555555443
No 358
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=53.04 E-value=32 Score=29.47 Aligned_cols=36 Identities=17% Similarity=0.066 Sum_probs=31.9
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCH
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNV 401 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~ 401 (437)
.+..++.+|..++..++|.+|..++..|+...|...
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 456788899999999999999999999999988664
No 359
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=51.42 E-value=20 Score=25.17 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=13.2
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHhCC
Q 013755 407 RAQAYMEIADLILAELDIKKAIEADP 432 (437)
Q Consensus 407 ~g~~~~~lg~~~~A~~~~~~al~l~P 432 (437)
+|..+...|++++|..+|-+|+.+.|
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~ 48 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCG 48 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 44455555555555555555555444
No 360
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=51.22 E-value=1.1e+02 Score=30.02 Aligned_cols=47 Identities=9% Similarity=-0.121 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 383 YQGAIELCSKVLDCDCHN-----------VKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~-----------~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
|+..++.++.|+..-|.. .-|+-.+|++|+.+++|++|++..++++.
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777778887765531 35788899999999999999999999985
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=51.05 E-value=19 Score=38.97 Aligned_cols=48 Identities=17% Similarity=0.230 Sum_probs=38.0
Q ss_pred HHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 013755 377 CLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAI 428 (437)
Q Consensus 377 ~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al 428 (437)
+...+.++-| .+.+...|.++-.-|-+|.+|+.+|++++|..+|++|-
T Consensus 820 L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 820 LFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 4445555543 34567788888888999999999999999999999874
No 362
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=50.88 E-value=20 Score=35.53 Aligned_cols=73 Identities=18% Similarity=0.084 Sum_probs=54.6
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhC
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCD 397 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~ 397 (437)
+..+...=..|...+.|++|..+..++. .|... .+. ...+..++.+|.++.-+++|.+|.+++..|+...
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~-~sn-------~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTD-VSS-------SLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTT-SCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCccc-CCH-------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 4444555566888899999999988874 33221 111 2245778889999999999999999999999988
Q ss_pred CCC
Q 013755 398 CHN 400 (437)
Q Consensus 398 p~~ 400 (437)
|.+
T Consensus 301 p~~ 303 (523)
T 4b4t_S 301 PHN 303 (523)
T ss_dssp SCS
T ss_pred Ccc
Confidence 755
No 363
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=49.16 E-value=51 Score=31.94 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=57.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCC------ChHHH--HHHHhhhHHHhhhHHHHHHhccCHHHHHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF------VDDEQ--KLVKSLRVSCWLNSAACCLKLKDYQGAIEL 389 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~------~~~~~--~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~ 389 (437)
..-+...++.+.+.++|.+|.-++.....+..-+... ..... ....+.+-.++...+..+.+-+.|+.|+..
T Consensus 35 i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l 114 (436)
T 2yin_A 35 IRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISL 114 (436)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3445667889999999999998885554443211110 00000 111222333455555566677789999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhcc
Q 013755 390 CSKVLDCDCHNVKALYRRAQAYMEIAD 416 (437)
Q Consensus 390 ~~~al~~~p~~~~a~~~~g~~~~~lg~ 416 (437)
|+.++...-.+..-|-.++.+|..+.+
T Consensus 115 ~k~L~~~yE~~~~Dy~~Ls~~~~~~a~ 141 (436)
T 2yin_A 115 CKELAEQYEMEIFDYELLSQNLIQQAK 141 (436)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999886543333335555666655543
No 364
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.30 E-value=88 Score=24.05 Aligned_cols=20 Identities=25% Similarity=0.406 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHhCCCCHH
Q 013755 383 YQGAIELCSKVLDCDCHNVK 402 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~~~ 402 (437)
|..|+++|.+++...+.+.+
T Consensus 41 Y~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 41 YQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHhccCCHH
Confidence 45556666666666655554
No 365
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=46.68 E-value=79 Score=22.79 Aligned_cols=25 Identities=20% Similarity=0.125 Sum_probs=12.9
Q ss_pred hhHHHHHHhccCHHHHHHHHHHHHH
Q 013755 371 LNSAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 371 ~nla~~~~~~~~~~~Ai~~~~~al~ 395 (437)
...|.-.-..|+|++|+.+|..+++
T Consensus 20 v~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 20 LKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3344444455555555555555554
No 366
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=46.30 E-value=79 Score=22.64 Aligned_cols=23 Identities=22% Similarity=0.133 Sum_probs=11.2
Q ss_pred HHHHHHhccCHHHHHHHHHHHHH
Q 013755 373 SAACCLKLKDYQGAIELCSKVLD 395 (437)
Q Consensus 373 la~~~~~~~~~~~Ai~~~~~al~ 395 (437)
.|.-.-+.|+|++|+.+|.++++
T Consensus 25 ~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 25 NAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHH
Confidence 33333445555555555555443
No 367
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=45.68 E-value=74 Score=27.69 Aligned_cols=72 Identities=14% Similarity=0.056 Sum_probs=49.1
Q ss_pred HHHHHHHhhHH-----HhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHH-hccCHHHHHHHHH
Q 013755 318 AGRKKEEGNLL-----FKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCL-KLKDYQGAIELCS 391 (437)
Q Consensus 318 ~~~~~~~g~~~-----~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~Ai~~~~ 391 (437)
+-.++-.|..| |..|+-+.|...|+.|..+....-. ..+..+.-+.+|.+..|+ -+++.++|+....
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~-------pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk 192 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPD-------KIEQLPLGFIQNLAYILSEKYGEKKQVFNMLN 192 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGG-------GGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCC-------CCChHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 45555666553 4567788999999999987532110 112345566777777665 4899999999999
Q ss_pred HHHHh
Q 013755 392 KVLDC 396 (437)
Q Consensus 392 ~al~~ 396 (437)
+|+..
T Consensus 193 ~Afd~ 197 (227)
T 2o8p_A 193 SLGKI 197 (227)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99763
No 368
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=45.57 E-value=15 Score=26.18 Aligned_cols=27 Identities=26% Similarity=0.217 Sum_probs=23.9
Q ss_pred hhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 370 WLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 370 ~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
...+|.=|..+|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 567888999999999999999999864
No 369
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=45.33 E-value=98 Score=25.34 Aligned_cols=60 Identities=7% Similarity=0.040 Sum_probs=45.7
Q ss_pred hhHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHH--HHhccHHHHHHHHHHHHHh
Q 013755 371 LNSAACCLKLKDYQGAIELCSKVLDCDCHN------VKALYR-RAQAY--MEIADLILAELDIKKAIEA 430 (437)
Q Consensus 371 ~nla~~~~~~~~~~~Ai~~~~~al~~~p~~------~~a~~~-~g~~~--~~lg~~~~A~~~~~~al~l 430 (437)
+..+..++..|+|-+|-+.++.+-...+.. .+++.+ +|.++ ...|+..-|...+.+|+..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 456677778899999999999887776554 355666 55554 5569999999999999873
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=43.75 E-value=25 Score=38.83 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=38.1
Q ss_pred HHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 013755 375 ACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILAELDIKKAI 428 (437)
Q Consensus 375 ~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al 428 (437)
..+.+.+.++.|. ..+...|.++-.-|-+|.+++..|++++|..+|++|-
T Consensus 820 ~~l~~~~~~~~~~----~l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 820 EKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHSCTTHHH----HHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHhhhHHHHH----HHhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 3344555554443 3456678888888999999999999999999999873
No 371
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=43.49 E-value=1e+02 Score=26.69 Aligned_cols=47 Identities=13% Similarity=-0.025 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 385 GAIELCSKVLDCD--CHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 385 ~Ai~~~~~al~~~--p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
.+...|....... -..+..|-..|..+...|+|.+|.+.|+.+++-.
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 5555666555443 3445666677888888899999999999888653
No 372
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=42.00 E-value=92 Score=22.21 Aligned_cols=14 Identities=21% Similarity=-0.069 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHhh
Q 013755 335 ERAGKKYNKAADCV 348 (437)
Q Consensus 335 ~~A~~~y~~al~~~ 348 (437)
++|+.+.++|+..+
T Consensus 9 ~~Ai~lv~~Ave~D 22 (83)
T 2v6y_A 9 DMARKYAILAVKAD 22 (83)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45666666665553
No 373
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.78 E-value=19 Score=27.75 Aligned_cols=25 Identities=12% Similarity=0.108 Sum_probs=12.1
Q ss_pred hhhHHHHHHhccCHHHHHHHHHHHH
Q 013755 370 WLNSAACCLKLKDYQGAIELCSKVL 394 (437)
Q Consensus 370 ~~nla~~~~~~~~~~~Ai~~~~~al 394 (437)
|.|.|+..-..|+-++|+.+|.+.+
T Consensus 25 ~Is~AL~~DE~g~k~~Al~lYk~GI 49 (116)
T 2dl1_A 25 FVNKGLNTDELGQKEEAKNYYKQGI 49 (116)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHhhhhhcCCHHHHHHHHHHHH
Confidence 4445554444555555544444433
No 374
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=41.14 E-value=1.3e+02 Score=24.38 Aligned_cols=105 Identities=8% Similarity=-0.010 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHH
Q 013755 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKV 393 (437)
Q Consensus 314 ~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~a 393 (437)
.+..-..+..--...|-.|.- .=...++++++...++.....+. =|+++-.-|...- ..+...|...
T Consensus 25 PL~~w~~YI~W~e~~~P~g~~-~l~~lLErc~~~f~~~~~YknD~----------RyLklWl~ya~~~--~dp~~if~~L 91 (152)
T 4a1g_A 25 PLGEWERYIQWVEENFPENKE-YLITLLEHLMKEFLDKKKYHNDP----------RFISYCLKFAEYN--SDLHQFFEFL 91 (152)
T ss_dssp HHHHHHHHHHHHHTTCSSCTH-HHHHHHHHHHHHHTTCGGGTTCH----------HHHHHHHHHHTTB--SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCch-hHHHHHHHHHHHhcccccccCCH----------HHHHHHHHHHHhc--CCHHHHHHHH
Confidence 344444444444444444432 23456777777665443221111 1333333333332 3366666666
Q ss_pred HHhCC--CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 394 LDCDC--HNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 394 l~~~p--~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
....- ..+..|-..|..+...|++.+|.+.|+.+++-.
T Consensus 92 ~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 92 YNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp HTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 55433 445666677888889999999999999988753
No 375
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=40.75 E-value=41 Score=32.73 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=25.5
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++.-+|.+|+-+++|++|+.++++++..
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 3456777888899999999999999999863
No 376
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=39.69 E-value=83 Score=29.70 Aligned_cols=30 Identities=10% Similarity=-0.030 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 401 VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 401 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
+.|+|+.|..+...+++-+|+..|+.|.+.
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 356788888888889999999988887653
No 377
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=39.37 E-value=1.4e+02 Score=28.95 Aligned_cols=47 Identities=13% Similarity=-0.060 Sum_probs=37.0
Q ss_pred HH-HHHHHHHHHHHh-CCC--------CHHHHHHHHHHHHHhc---------cHHHHHHHHHHHHH
Q 013755 383 YQ-GAIELCSKVLDC-DCH--------NVKALYRRAQAYMEIA---------DLILAELDIKKAIE 429 (437)
Q Consensus 383 ~~-~Ai~~~~~al~~-~p~--------~~~a~~~~g~~~~~lg---------~~~~A~~~~~~al~ 429 (437)
|+ ..+.+++.|+.. -|. ..-|+-.+|++|+.++ +|++|++..++++.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 55 677788888876 342 1367888999999988 99999999999986
No 378
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=38.86 E-value=57 Score=31.66 Aligned_cols=48 Identities=19% Similarity=0.009 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 383 YQGAIELCSKVLDCDCHN--------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~--------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
|+..+.+++.|+.+-|.. .-|+..+|++|+.+++|++|++..++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 567778888888765532 357888999999999999999999999863
No 379
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=38.56 E-value=1.6e+02 Score=24.16 Aligned_cols=46 Identities=11% Similarity=0.141 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhC--CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Q 013755 386 AIELCSKVLDCD--CHNVKALYRRAQAYMEIADLILAELDIKKAIEAD 431 (437)
Q Consensus 386 Ai~~~~~al~~~--p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 431 (437)
+...|....... -..+..|-..|..+...|+|.+|.+.|+.+++-.
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQK 126 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 445555554433 3345556666777778888888888888877643
No 380
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=38.23 E-value=32 Score=25.53 Aligned_cols=25 Identities=12% Similarity=0.220 Sum_probs=12.4
Q ss_pred hHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 372 NSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 372 nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.+|..+...|+++.|+.++-+||..
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~V 49 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAV 49 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4455555555555555554444443
No 381
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=38.02 E-value=46 Score=32.38 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=25.4
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++.-+|.+|+-+++|++|+.++++++..
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3456777888888899999999999999863
No 382
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=37.80 E-value=68 Score=31.51 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=26.8
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++.-+|.+|+-+++|++|+.++++++..
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3456778899999999999999999999975
No 383
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=37.22 E-value=73 Score=28.39 Aligned_cols=53 Identities=23% Similarity=0.298 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHh-ccCHHHHHHHHHHHHH
Q 013755 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (437)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~Ai~~~~~al~ 395 (437)
+.|...|++|+.+. ..-.. ...++..+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~p-------thPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEP-------THPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57888999999987 32211 124456667777777665 8999999999998875
No 384
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=37.19 E-value=1.5e+02 Score=29.38 Aligned_cols=48 Identities=10% Similarity=-0.063 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHhCCC-------------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 383 YQGAIELCSKVLDCDCH-------------NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~-------------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
|+..++.++.|+..-|. ..-|+-.+|++|+..++|++|.+..++++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 45677778888776562 1257888999999999999999999999863
No 385
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=37.17 E-value=31 Score=24.58 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=26.1
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhc
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~ 349 (437)
.......|..+...|+|+.|+.+|+.++....
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~ 43 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVLDQMN 43 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 44455677788888999999999999998764
No 386
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=37.13 E-value=7.1 Score=34.89 Aligned_cols=40 Identities=18% Similarity=0.151 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhcc
Q 013755 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (437)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 350 (437)
.......|..+..+|..+=+.|+|++|+.+|+.|++++-.
T Consensus 16 ~dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~ 55 (257)
T 2ymb_A 16 QDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 55 (257)
T ss_dssp ----------------------------------------
T ss_pred CChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3445677888889999999999999999999999987643
No 387
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=36.63 E-value=1.2e+02 Score=22.08 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHhCCCCH
Q 013755 383 YQGAIELCSKVLDCDCHNV 401 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~~ 401 (437)
|..|+++|.+++...|+..
T Consensus 38 Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 38 YQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHCCCHH
Confidence 4556666666666666543
No 388
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=36.39 E-value=77 Score=30.78 Aligned_cols=47 Identities=15% Similarity=0.057 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 383 YQGAIELCSKVLDCDCHN--------VKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~--------~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
|+..+.+++.|+.+-|.. .-|+..+|++|+.+++|++|+...++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 567788888888765532 35788899999999999999999999986
No 389
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=34.67 E-value=85 Score=30.83 Aligned_cols=48 Identities=15% Similarity=0.009 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 383 YQGAIELCSKVLDCDCHN-----------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~-----------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
|+..+.+++.|+..-|.. .-|+-.+|++|+.+++|++|+...++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 566777777887765432 357788999999999999999999999864
No 390
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.28 E-value=49 Score=32.32 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=26.1
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++.-+|.+|+-+++|++|+.++++++..
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3456777888999999999999999999874
No 391
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=34.09 E-value=1.3e+02 Score=25.42 Aligned_cols=37 Identities=11% Similarity=0.068 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccC
Q 013755 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED 351 (437)
Q Consensus 315 ~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~ 351 (437)
-+.+.-++-.|..++.+++|.+|...+.+|++..|..
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 3567788999999999999999999999999987643
No 392
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=33.12 E-value=89 Score=30.46 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=26.7
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++.-+|.+|+-+++|++|+.++++++..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4556778899999999999999999999964
No 393
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=33.04 E-value=67 Score=28.17 Aligned_cols=53 Identities=21% Similarity=0.200 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhhcc-CCCCChHHHHHHHhhhHHHhhhHHHHHHh-ccCHHHHHHHHHHHHH
Q 013755 335 ERAGKKYNKAADCVSE-DGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (437)
Q Consensus 335 ~~A~~~y~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~Ai~~~~~al~ 395 (437)
+.|...|++|+.+... .+.. +.++..+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pt--------hPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPT--------HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT--------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCC--------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5788899999987532 1211 24455667777776665 8999999998888875
No 394
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=32.56 E-value=84 Score=30.61 Aligned_cols=48 Identities=15% Similarity=0.112 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 383 YQGAIELCSKVLDCDCHN--------VKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~~--------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
|+..+.+++.|+.+-|.. .-|+-.+|++|+.+++|++|++..++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 667788888888765532 356888999999999999999999999875
No 395
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=31.61 E-value=1.6e+02 Score=31.96 Aligned_cols=62 Identities=10% Similarity=-0.022 Sum_probs=51.3
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDC----DCHNVKALYRRAQAYMEIADLILAELDIKKAIE 429 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 429 (437)
..|+.+-.+|.+.|+.++|...+.+.-+. -.-|...|.-+-..|.+.|++++|++.|++..+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 45777788999999999999999764322 233688999999999999999999999998765
No 396
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=30.58 E-value=86 Score=30.45 Aligned_cols=30 Identities=10% Similarity=-0.147 Sum_probs=26.2
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
..++.-+|.+|+.+++|++|+.++++++..
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 456778899999999999999999999864
No 397
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=30.54 E-value=2.8e+02 Score=27.03 Aligned_cols=88 Identities=17% Similarity=0.035 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccC------------------------HHHHHHHHH
Q 013755 336 RAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD------------------------YQGAIELCS 391 (437)
Q Consensus 336 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~------------------------~~~Ai~~~~ 391 (437)
.+|.....+|+..+.. .+++ . ..++..+++-+|.+|+.+=+ |+..++.++
T Consensus 104 ~~I~~aN~~i~~i~~~--~~~~---~-~~~~gEA~flRA~~Yf~Lv~~fG~VPl~~~~~~~~~~R~s~~evy~~I~~DL~ 177 (527)
T 3ckc_A 104 YDITQYNFFLDQTEGM--TDAE---T-LRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELN 177 (527)
T ss_dssp HHHHHHHHHHHHSTTC--CSHH---H-HHHHHHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhc--cChH---H-HHHHHHHHHHHHHHHHHHHHHhCCCCccCCccccCCCcCCHHHHHHHHHHHHH
Confidence 4566666666655432 2221 1 44555566666666554211 567788888
Q ss_pred HHHHhCCCC----------HHHHHHHHHHHHHh------ccHHHHHHHHHHHHH
Q 013755 392 KVLDCDCHN----------VKALYRRAQAYMEI------ADLILAELDIKKAIE 429 (437)
Q Consensus 392 ~al~~~p~~----------~~a~~~~g~~~~~l------g~~~~A~~~~~~al~ 429 (437)
.|+..-|.. .-|+-.+|++|+.. ++|++|++..++++.
T Consensus 178 ~A~~~Lp~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 178 EIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHGGGSCCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHhCccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 888765521 35677788888865 899999999999985
No 398
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=30.49 E-value=1.9e+02 Score=28.09 Aligned_cols=83 Identities=8% Similarity=-0.051 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHH
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSK 392 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~ 392 (437)
.+....-.....-..||+.++...|...++.. +.....+.++ . -.....+..++.+|..++..++|.+|..++..
T Consensus 171 kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i-~~~~~~p~~~--~--~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~ 245 (455)
T 3t5v_B 171 KQRILLYLVNKLNNIYFRIESPQLCSNIFKNF-QPKSMLAHFN--E--YQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNE 245 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTH-HHHCCCSCGG--G--SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHcCCHHHHHHHHHHh-ccCCCCcChh--h--CCccceEeeeHHHHHHHHHHccHHHHHHHHHH
Confidence 34444444445557799999999998877543 3321111110 0 01233567788999999999999999999999
Q ss_pred HHHh-CCCC
Q 013755 393 VLDC-DCHN 400 (437)
Q Consensus 393 al~~-~p~~ 400 (437)
|+.. .|.+
T Consensus 246 A~~~lcp~~ 254 (455)
T 3t5v_B 246 AFQSLLNLP 254 (455)
T ss_dssp HHHHHHHCC
T ss_pred HHHhcCCcc
Confidence 9998 7755
No 399
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=29.66 E-value=97 Score=27.37 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhhcc-CCCCChHHHHHHHhhhHHHhhhHHHHHHh-ccCHHHHHHHHHHHHH
Q 013755 335 ERAGKKYNKAADCVSE-DGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (437)
Q Consensus 335 ~~A~~~y~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~Ai~~~~~al~ 395 (437)
+.|...|++|..+... .+.. +.++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pt--------hPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPT--------HPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT--------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCC--------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6788899999886532 1111 24456667777776665 8999999998888764
No 400
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=29.12 E-value=83 Score=28.03 Aligned_cols=53 Identities=21% Similarity=0.243 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhhcc-CCCCChHHHHHHHhhhHHHhhhHHHHHHh-ccCHHHHHHHHHHHHH
Q 013755 335 ERAGKKYNKAADCVSE-DGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (437)
Q Consensus 335 ~~A~~~y~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~Ai~~~~~al~ 395 (437)
+.|...|++|+.+... .+.. ..++..+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pt--------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPT--------HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT--------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCC--------CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 5788899999987532 1211 24456667777776665 7999999998888774
No 401
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=28.90 E-value=86 Score=27.92 Aligned_cols=53 Identities=21% Similarity=0.200 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhhcc-CCCCChHHHHHHHhhhHHHhhhHHHHHHh-ccCHHHHHHHHHHHHH
Q 013755 335 ERAGKKYNKAADCVSE-DGSFVDDEQKLVKSLRVSCWLNSAACCLK-LKDYQGAIELCSKVLD 395 (437)
Q Consensus 335 ~~A~~~y~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~Ai~~~~~al~ 395 (437)
+.|...|++|+.+... .+.. ..++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pT--------hPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPT--------HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT--------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCC--------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6678899999886532 1111 24456667777776665 7999999998888764
No 402
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=28.64 E-value=1e+02 Score=26.94 Aligned_cols=54 Identities=20% Similarity=0.221 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhhcc-CCCCChHHHHHHHhhhHHHhhhHHHHHH-hccCHHHHHHHHHHHHH
Q 013755 334 YERAGKKYNKAADCVSE-DGSFVDDEQKLVKSLRVSCWLNSAACCL-KLKDYQGAIELCSKVLD 395 (437)
Q Consensus 334 ~~~A~~~y~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~Ai~~~~~al~ 395 (437)
-+.|...|++|..+... .+.. +.++..+.+|.+..|+ -+++.++|+..+++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pt--------hPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPT--------NPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTT--------CHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCC--------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36788899999886532 1111 2445666777777666 47999999998888764
No 403
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=28.37 E-value=1.1e+02 Score=24.52 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=37.8
Q ss_pred CChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHh----hccCCCC
Q 013755 309 MNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADC----VSEDGSF 354 (437)
Q Consensus 309 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~----~~~~~~~ 354 (437)
.+...-+..+..+...|..|...|+++.|.-.|.+++.+ .|..+++
T Consensus 31 i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~IpkHpdy 80 (146)
T 2xze_A 31 IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDY 80 (146)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGGSTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcccCccc
Confidence 456677888999999999999999999999999997665 4555544
No 404
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=33.99 E-value=13 Score=38.50 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=46.8
Q ss_pred HHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHH
Q 013755 368 SCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLILA 420 (437)
Q Consensus 368 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A 420 (437)
...+..|...+..|+|.-|.+.++.++..+|+|..|...++.+|.++|.-.+.
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 44567788888999999999999999999999999999999999999976554
No 405
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=27.75 E-value=1.1e+02 Score=30.04 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=26.5
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++.-+|.+|+.+++|++|+..+++++..
T Consensus 181 k~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 181 KGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456778899999999999999999999964
No 406
>3iv0_A SUSD homolog; NP_809186.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.00 E-value=3.4e+02 Score=26.25 Aligned_cols=46 Identities=7% Similarity=-0.173 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHh------CCCC-------------HHHHHHHHHHHHHhcc---------HHHHHHHHHHHH
Q 013755 383 YQGAIELCSKVLDC------DCHN-------------VKALYRRAQAYMEIAD---------LILAELDIKKAI 428 (437)
Q Consensus 383 ~~~Ai~~~~~al~~------~p~~-------------~~a~~~~g~~~~~lg~---------~~~A~~~~~~al 428 (437)
|+..+.+++.|+.. -|.. .-|+-.+|++|+.++. |++|++..++++
T Consensus 166 y~~I~~DL~~A~~~~~~~~~Lp~~~~~~~~~~gR~tk~aA~allarvyL~~~~~~~~~~~~~~~~a~~~a~~vi 239 (481)
T 3iv0_A 166 LQNCLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASRGSVIALMMHINLWLVQFDAQNKEQYYRNVVSLGEELE 239 (481)
T ss_dssp HHHHHHHHHHHHHTCTTSCSSCSCCSSTTTTTTSCCHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccccccCCCccccCcccCCccCHHHHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHH
Confidence 67788888889886 4421 1456678888877654 788888888776
No 407
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=25.44 E-value=3.1e+02 Score=23.25 Aligned_cols=86 Identities=5% Similarity=0.051 Sum_probs=54.6
Q ss_pred HHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhcc
Q 013755 339 KKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDC--HNVKALYRRAQAYMEIAD 416 (437)
Q Consensus 339 ~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p--~~~~a~~~~g~~~~~lg~ 416 (437)
..+++++....++.....+.. ...+|+..+.++ ...+...+...|.......= ..+..|-..|..+...|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~R------YLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPR------FLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHH------HHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHH------HHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCC
Confidence 567788776655443221111 123344444332 12336678888877766543 456667777888899999
Q ss_pred HHHHHHHHHHHHHhC
Q 013755 417 LILAELDIKKAIEAD 431 (437)
Q Consensus 417 ~~~A~~~~~~al~l~ 431 (437)
|.+|.+.|+.+++-.
T Consensus 131 ~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 131 FLEAKVLLELGAENN 145 (202)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999998753
No 408
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=24.39 E-value=1.5e+02 Score=29.39 Aligned_cols=31 Identities=10% Similarity=0.280 Sum_probs=26.2
Q ss_pred hHHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 366 RVSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 366 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
+..++.-+|.+|+-+++|++|...+++++..
T Consensus 197 k~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 197 KQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 3456777888898899999999999999964
No 409
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=24.28 E-value=95 Score=27.75 Aligned_cols=58 Identities=16% Similarity=0.109 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHH-hccCHHHHHHHHHHHHHh
Q 013755 334 YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCL-KLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 334 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~Ai~~~~~al~~ 396 (437)
-+.|...|++|+.+....-.. .-...++.-+.+|.+..|+ -+++.++|+..+++|+..
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~-----~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEK-----YPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT-----GGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC-----CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 367888999998765221100 0112455666778877766 489999999999998865
No 410
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=23.70 E-value=1.6e+02 Score=21.32 Aligned_cols=38 Identities=13% Similarity=0.099 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhh
Q 013755 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (437)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~ 348 (437)
..+.++.+..+.+.|..+++.|++..|+.++.=+-..+
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 65 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWL 65 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 46778899999999999999999999998876655443
No 411
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=23.03 E-value=0.35 Score=47.68 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=57.3
Q ss_pred HHHhhHHHhCCcHHHHHHHHHHHHHhhccCCCCChHHHHHHHhhhHHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCH
Q 013755 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNV 401 (437)
Q Consensus 322 ~~~g~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~ 401 (437)
...|..+|..|.|+.|.-+|... +-|..||.|+.++++|+.|++..+|| +++
T Consensus 148 q~VGDrcf~e~lYeAAKilys~i-----------------------sN~akLAstLV~L~~yq~AVdaArKA-----ns~ 199 (624)
T 3lvg_A 148 QQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAVDGARKA-----NST 199 (624)
T ss_dssp HHHHHHHHHSCCSTTSSTTGGGS-----------------------CCCTTTSSSSSSCSGGGSSTTTTTTC-----CSS
T ss_pred HHHHHHHHHccCHHHHHHHHHhC-----------------------ccHHHHHHHHHHHHHHHHHHHHHHhc-----CCh
Confidence 45789999999999998777531 11668999999999999999988775 677
Q ss_pred HHHHHHHHHHHHhccHHHHHHH
Q 013755 402 KALYRRAQAYMEIADLILAELD 423 (437)
Q Consensus 402 ~a~~~~g~~~~~lg~~~~A~~~ 423 (437)
+.|-....++...++|.-|.-+
T Consensus 200 ktWKeV~~ACvd~~EfrLAqic 221 (624)
T 3lvg_A 200 RTWKEVCFACVDGKEFRLAQMC 221 (624)
T ss_dssp CSHHHHTHHHHHSCTTTTTTHH
T ss_pred hHHHHHHHHHhCchHHHHHHHh
Confidence 7777777777777777666544
No 412
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=22.98 E-value=1.9e+02 Score=21.20 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=22.1
Q ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 013755 380 LKDYQGAIELCSKVLDCDCHNVKALYRRAQ 409 (437)
Q Consensus 380 ~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~ 409 (437)
.+....++....++|+.+|+|+.+|-.+-.
T Consensus 29 a~~~~~~l~~Al~~L~~~psNPa~LAe~Qa 58 (92)
T 2g0u_A 29 VKDLNKQLQDAQANLTKNPSDPTALANYQM 58 (92)
T ss_dssp THHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 345677788888889999999987644433
No 413
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=22.96 E-value=1.7e+02 Score=21.14 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHh
Q 013755 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (437)
Q Consensus 311 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~ 347 (437)
..+-++.+..+.+.|..+++.|++..|+.++.=+-..
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~Gw 68 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGL 68 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999887655444
No 414
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=22.79 E-value=18 Score=35.22 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhcc
Q 013755 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (437)
Q Consensus 313 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~ 350 (437)
+.++.+..+..+|..+=+.|+|++|+.+|++|++++-.
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34567788888999999999999999999999997643
No 415
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=22.25 E-value=99 Score=30.02 Aligned_cols=48 Identities=17% Similarity=-0.006 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCC-------------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 383 YQGAIELCSKVLDCDC-------------HNVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p-------------~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
|+..+.+++.|+.+-| +..-|+-.+|++|+.+++|++|+...++++..
T Consensus 160 y~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 160 YQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4556666666665322 12356788999999999999999999999853
No 416
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=21.67 E-value=4.4e+02 Score=23.59 Aligned_cols=103 Identities=17% Similarity=0.080 Sum_probs=64.1
Q ss_pred ChHHHHHHHHHHHHHhhHHHhCCcHHHHHHHHHHHHHhhcc----CCCCChHHH-HHHHhhhHHHhhhHHHH----HHhc
Q 013755 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE----DGSFVDDEQ-KLVKSLRVSCWLNSAAC----CLKL 380 (437)
Q Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~y~~al~~~~~----~~~~~~~~~-~~~~~~~~~~~~nla~~----~~~~ 380 (437)
+.++.+.+.--+++.....+..|+.+..+..++-.+.-... .. ..... .......+.+++.++.. -++.
T Consensus 14 ~~~d~~sql~gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e--~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ 91 (346)
T 3qtm_A 14 TEEDNISQLWGLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTE--DISTLPKDFHAAYSSALLAVSELFEIAQKRL 91 (346)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCS--CGGGSCHHHHHHHHHHHHHHHHTHHHHGGGS
T ss_pred eccchHHHHHhHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccC--CCCCCCHHHHHHHHHHHHhHHHhhHHhhccC
Confidence 45667777888889999999999999999888776653221 11 00000 11122222223222222 2333
Q ss_pred cC-------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 013755 381 KD-------YQGAIELCSKVLDCDCHNVKALYRRAQAYMEI 414 (437)
Q Consensus 381 ~~-------~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~l 414 (437)
++ |+.|++-++-.++..|++....+-++++++..
T Consensus 92 ede~~V~eFFDaALERielGLe~~p~s~~L~la~SKILlqr 132 (346)
T 3qtm_A 92 KETNTEESYIDAAIERAQLGLDAPGNESRLFLALARAYLEK 132 (346)
T ss_dssp CTTCCHHHHHHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHhhhhhCCCChhHHHHHHHHHHHH
Confidence 32 67888888888999999988888777776543
No 417
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=21.54 E-value=1.8e+02 Score=19.16 Aligned_cols=51 Identities=16% Similarity=-0.047 Sum_probs=28.6
Q ss_pred hhhHHHHHHhccCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHhccHHHHH
Q 013755 370 WLNSAACCLKLKDYQGAIELCSKVLDCDCHNV-KALYRRAQAYMEIADLILAE 421 (437)
Q Consensus 370 ~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~-~a~~~~g~~~~~lg~~~~A~ 421 (437)
+-.+|..---...+++|.... .-|+..+... -+-.-+...++..|+|++|+
T Consensus 9 LAe~AL~~TG~HcH~EA~tIA-~~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 9 LAELALAGTGHHCHQEAASIA-DWLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHTTTCHHHHHHHH-HHHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHccchHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 445566666677788875543 4477777654 34556778899999999986
No 418
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.48 E-value=1.7e+02 Score=28.43 Aligned_cols=48 Identities=13% Similarity=-0.148 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHhCCC-----------------------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Q 013755 383 YQGAIELCSKVLDCDCH-----------------------NVKALYRRAQAYMEIADLILAELDIKKAIEA 430 (437)
Q Consensus 383 ~~~Ai~~~~~al~~~p~-----------------------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 430 (437)
|+..+..++.|+..-|. ..-|+-.+|++|+.+++|++|++..++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 45667777777765432 1246788999999999999999999999864
No 419
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=21.40 E-value=1.7e+02 Score=27.55 Aligned_cols=62 Identities=13% Similarity=0.047 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhhccCCCCChHHHHHHHhhh-----HHHhhhHHHHHHhccCHHHHHHHHHHHHHh
Q 013755 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLR-----VSCWLNSAACCLKLKDYQGAIELCSKVLDC 396 (437)
Q Consensus 335 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~-----~~~~~nla~~~~~~~~~~~Ai~~~~~al~~ 396 (437)
.++..+|++|..........-...|...-..+ +.+++..|..+...+++.+|+..++.|.+.
T Consensus 216 ~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 216 YETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 45567888888876542211123443333333 556666677777788999999988887654
No 420
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=21.05 E-value=1.2e+02 Score=24.54 Aligned_cols=23 Identities=13% Similarity=0.302 Sum_probs=19.2
Q ss_pred cccHHHHhccccCCceEEEEEecCC
Q 013755 102 ATGLDNGIITMKKRECAVFTFTLPS 126 (437)
Q Consensus 102 ~~g~~~~l~~m~~G~~~~~~~~ip~ 126 (437)
..-+..||.|.++|+.+.+ ..|.
T Consensus 121 ~SPlg~ALlGk~vGD~v~v--~~P~ 143 (158)
T 2p4v_A 121 DSPMARALLKKEVGDLAVV--NTPA 143 (158)
T ss_dssp TSHHHHHSTTCCTTCEEEE--ECSS
T ss_pred CCHHHHHhcCCCCCCEEEE--EcCC
Confidence 3458899999999999999 7664
No 421
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=20.57 E-value=71 Score=18.74 Aligned_cols=16 Identities=19% Similarity=0.098 Sum_probs=10.7
Q ss_pred cHHHHHHHHHHHHHhC
Q 013755 416 DLILAELDIKKAIEAD 431 (437)
Q Consensus 416 ~~~~A~~~~~~al~l~ 431 (437)
-|++|+..|+.+|+..
T Consensus 17 ayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 17 AYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4677777777777643
No 422
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=20.39 E-value=4.1e+02 Score=22.79 Aligned_cols=66 Identities=12% Similarity=0.144 Sum_probs=42.3
Q ss_pred HHHhhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcc--HHHHHHHHHHHHHhCCC
Q 013755 367 VSCWLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIAD--LILAELDIKKAIEADPQ 433 (437)
Q Consensus 367 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~--~~~A~~~~~~al~l~P~ 433 (437)
...+..+..+.+. .+-..|+.+|..||..+|.++.-.+..-..|...-+ -.-.+..|+.+...||.
T Consensus 93 ~etH~~RV~a~Ln-~rrr~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe 160 (219)
T 3pmr_A 93 VETHATRVIALIN-DQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPE 160 (219)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHH
Confidence 3444444444433 345789999999999998887665555454544332 33367788887777764
No 423
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=20.36 E-value=1.2e+02 Score=29.17 Aligned_cols=101 Identities=12% Similarity=0.088 Sum_probs=55.8
Q ss_pred HHHHHHHhhHHHhCCcHHHHHHHHHHHHHh----------hccCC----CCCh---HH--HHH---------HHhhhHHH
Q 013755 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADC----------VSEDG----SFVD---DE--QKL---------VKSLRVSC 369 (437)
Q Consensus 318 ~~~~~~~g~~~~~~g~~~~A~~~y~~al~~----------~~~~~----~~~~---~~--~~~---------~~~~~~~~ 369 (437)
..-+...++.+.+.++|.+|..++..+..+ .+-+. ...+ ++ ... -...+..+
T Consensus 11 ~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~l 90 (428)
T 2wm9_A 11 KTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMEL 90 (428)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHH
Confidence 455677888999999999999888644331 11000 0000 00 000 01112223
Q ss_pred hhhHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHH
Q 013755 370 WLNSAACCLKLKDYQGAIELCSKVLDCDCHNVKALYRRAQAYMEIADLIL 419 (437)
Q Consensus 370 ~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~ 419 (437)
+...+..+.+-+.|+.|+..|+.++...-.+ .-|-.++.+|..+.++-+
T Consensus 91 l~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~-~dy~~Ls~~~~~~a~~y~ 139 (428)
T 2wm9_A 91 LEQCADGLWKAERYELIADIYKLIIPIYEKR-RDFERLAHLYDTLHRAYS 139 (428)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 4334445556677999999998877653322 345566777766654433
Done!