Your job contains 1 sequence.
>013758
MALHLFKPKHRSLTNPSLIHLFSTSQNDNNDNNNNYSNSSLNSYFSDVKASLRKQTPPNQ
TTSSSSSSSRGPPSKVASLEEIRRNLAEFRQRSTVPPPIESNSTESQSQSQTQSQSQSQH
ISFQELYKRNTVNETLASKPSGKPSFEAIRESLRQMRARSNNDNNNNNRGNGVKNSDPLS
LKNFTNTLRMKPADDNAHRVIGGSQELPALVFGKEKKEEEKAVELERMKTDFVKMYSFEE
LGDKLKKLRPEGLEGGFSLRELNERLMRLRVMEMNESNSKIGAGTISALRSSLARIQIEK
EEKARVQRINILEGFGGTPEYLLHPPKEHLVEKYFHPDNMSSAEKMKIELAKVREEFKMS
ESDCGSARVQIAQLTTKIKHLSSALHKKDKHSRKGLQAMVQRRKRLLKYLRRTDWDSYCF
VLSKLGLRDNPDYKSLA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013758
(437 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198918 - symbol:AT1G80620 species:3702 "Arabi... 599 4.7e-70 2
TAIR|locus:2036229 - symbol:AT1G15810 species:3702 "Arabi... 573 3.0e-64 3
TIGR_CMR|CHY_1760 - symbol:CHY_1760 "ribosomal protein S1... 136 1.2e-08 1
UNIPROTKB|P0ADZ4 - symbol:rpsO species:83333 "Escherichia... 135 1.6e-08 1
TIGR_CMR|CBU_0851 - symbol:CBU_0851 "ribosomal protein S1... 132 3.4e-08 1
TIGR_CMR|CPS_2206 - symbol:CPS_2206 "ribosomal protein S1... 130 5.6e-08 1
TIGR_CMR|BA_3945 - symbol:BA_3945 "ribosomal protein S15"... 127 1.2e-07 1
UNIPROTKB|Q9KU77 - symbol:rpsO "30S ribosomal protein S15... 122 4.3e-07 1
TIGR_CMR|SO_1207 - symbol:SO_1207 "ribosomal protein S15"... 122 4.3e-07 1
TIGR_CMR|VC_0646 - symbol:VC_0646 "ribosomal protein S15"... 122 4.3e-07 1
TIGR_CMR|GSU_1592 - symbol:GSU_1592 "ribosomal protein S1... 121 5.5e-07 1
TIGR_CMR|APH_0768 - symbol:APH_0768 "ribosomal protein S1... 118 1.2e-06 1
TIGR_CMR|SPO_3840 - symbol:SPO_3840 "ribosomal protein S1... 114 3.2e-06 1
UNIPROTKB|P66429 - symbol:rpsO "30S ribosomal protein S15... 109 1.1e-05 1
TIGR_CMR|CJE_0964 - symbol:CJE_0964 "ribosomal protein S1... 109 1.1e-05 1
SGD|S000002745 - symbol:MRPS28 "Mitochondrial ribosomal p... 127 1.4e-05 1
TIGR_CMR|ECH_0727 - symbol:ECH_0727 "ribosomal protein S1... 108 1.4e-05 1
TIGR_CMR|DET_0969 - symbol:DET_0969 "ribosomal protein S1... 105 3.1e-05 1
>TAIR|locus:2198918 [details] [associations]
symbol:AT1G80620 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC018849 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 TIGRFAMs:TIGR00952 eggNOG:COG0184 HSSP:P80378
HOGENOM:HOG000070921 ProtClustDB:CLSN2687818 IPI:IPI00535133
PIR:D96838 RefSeq:NP_849914.1 UniGene:At.44637
ProteinModelPortal:Q9M8M9 SMR:Q9M8M9 PaxDb:Q9M8M9 PRIDE:Q9M8M9
EnsemblPlants:AT1G80620.1 GeneID:844401 KEGG:ath:AT1G80620
TAIR:At1g80620 InParanoid:Q9M8M9 OMA:ATTESKW PhylomeDB:Q9M8M9
Genevestigator:Q9M8M9 Uniprot:Q9M8M9
Length = 414
Score = 599 (215.9 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 149/318 (46%), Positives = 180/318 (56%)
Query: 124 QELYKRNTVNETLASKP-SGKPSFEAIRESLRQMRAXXXXXXXXXXXXXXXXXXXPLSLK 182
Q+L+K+N ++++ ++ G P I+ +LRQMR +L
Sbjct: 112 QDLFKQNVLSKSGGTRRIEGVP-LTNIKANLRQMRPQQATTESKWA-----------NLS 159
Query: 183 NFTNTLRMKPADDNAHRVIGGSQE-LPALVFGXXXXXXXXAVELERMKTDFVKMYSFEEL 241
N ++ D+ VIGG+ E LP V G V E MK++F+K Y EL
Sbjct: 160 GIQNIMKTNINDNIRSNVIGGAAEGLPHSVVGKELEEED--VTEEEMKSEFIKSYDPIEL 217
Query: 242 GDKLKKLRPEGL--EGGFSXXXXXXXXXXXXXXXXXX--SNSKIGAGTISALRSSLARIQ 297
G+KL+ RPEG EG FS S + ++ LRS +
Sbjct: 218 GEKLRLYRPEGKKEEGWFSLQELNQRLVKLRAMEEEQFQKTSIVHPSFVNNLRSEFHKFT 277
Query: 298 IEKEEKAR-VQRINILEGFGGTPEYLLHPPKEHLVEKYFHPDNMSSAEKMKIELAKVREE 356
K +K+ Q NI GTP+Y+L PPK+ LVE YFHPDNMSSAEKMKIELAKVREE
Sbjct: 278 --KAQKSDPFQNTNIWGVLSGTPKYMLEPPKDQLVETYFHPDNMSSAEKMKIELAKVREE 335
Query: 357 FKMSESDCGSARVQIAQLTTKIKHLSSALHKKDKHSRKGLQAMVQXXXXXXXXXXXTDWD 416
FKMSESDCGSARVQ+AQLTTKIKHLSS LHKKDKHSRKGL AMVQ TDWD
Sbjct: 336 FKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGLIAMVQRRKKLLKYMRRTDWD 395
Query: 417 SYCFVLSKLGLRDNPDYK 434
SYC LSKLGLRDNPDYK
Sbjct: 396 SYCLSLSKLGLRDNPDYK 413
Score = 129 (50.5 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 35/109 (32%), Positives = 46/109 (42%)
Query: 1 MALHLFKPKHRSLTNPSLIHLFXXXXXXXXXX-----------XXXXXXXXXXXXXXXVK 49
MALHL +PK R +NPSLIHLF ++
Sbjct: 1 MALHLARPKQRLHSNPSLIHLFSTSSSSSSSSPQDGNESNEQPSQSSSDYKISSYFSGIR 60
Query: 50 ASLRKQTPPNQTTXXXXXXXRGPPSKVASLEEIRRNLAEFRQRSTVPPP 98
+SL KQT P + ++ ++IRRNL EFR R+T PPP
Sbjct: 61 SSL-KQTQSQDGKRQFVRFDAKPQNSLSGNQDIRRNLNEFRSRATAPPP 108
>TAIR|locus:2036229 [details] [associations]
symbol:AT1G15810 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=ISS] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0009086
"methionine biosynthetic process" evidence=RCA] InterPro:IPR000589
InterPro:IPR005290 Pfam:PF00312 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC034256 Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
TIGRFAMs:TIGR00952 HSSP:P80378 UniGene:At.15569 UniGene:At.72611
UniGene:At.74824 UniGene:At.74983 EMBL:AF361614 EMBL:AY133600
IPI:IPI00532276 PIR:E86292 RefSeq:NP_563982.1
ProteinModelPortal:Q9LMQ3 SMR:Q9LMQ3 IntAct:Q9LMQ3 STRING:Q9LMQ3
PaxDb:Q9LMQ3 PRIDE:Q9LMQ3 EnsemblPlants:AT1G15810.1 GeneID:838150
KEGG:ath:AT1G15810 TAIR:At1g15810 eggNOG:NOG313275
HOGENOM:HOG000070921 InParanoid:Q9LMQ3 OMA:YNEEELG PhylomeDB:Q9LMQ3
ProtClustDB:CLSN2687818 Genevestigator:Q9LMQ3 Uniprot:Q9LMQ3
Length = 419
Score = 573 (206.8 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 121/213 (56%), Positives = 140/213 (65%)
Query: 224 ELERMKTDFVKMYSFEELGDKLKKLRPEG--LEGGFSXXXXXXXXXXXXXXXXXXSNSKI 281
E E T+F+ Y+ EELG+KL+ LRPEG EG FS + +
Sbjct: 208 ETEEAMTEFLMFYNEEELGEKLRTLRPEGEKKEGWFSLEELNQRLVKLRQVEEKEAQYR- 266
Query: 282 GAGTISALRSSLARIQIEKEEKARVQRINILEGFGGTPEYLLHPPKEHLVEKYFHPDNMS 341
+ LR+ ++ + E E + Q + I+ GG PEY L PPKE LV+ YFHPDNMS
Sbjct: 267 -TKNFAQLRNVISSFKNENSEASSQQNVAIMGHLGGIPEYKLLPPKEDLVDTYFHPDNMS 325
Query: 342 SAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSALHKKDKHSRKGLQAMVQ 401
SAEKMKIEL+KVREEFKMSESDCGSARVQ+AQLTTKIKHLSS+LHKKDKHSRKGL MVQ
Sbjct: 326 SAEKMKIELSKVREEFKMSESDCGSARVQVAQLTTKIKHLSSSLHKKDKHSRKGLLGMVQ 385
Query: 402 XXXXXXXXXXXTDWDSYCFVLSKLGLRDNPDYK 434
TDWDSYC VLSKL LRDNPDYK
Sbjct: 386 KRKKLLKYLRRTDWDSYCLVLSKLSLRDNPDYK 418
Score = 66 (28.3 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 11/19 (57%), Positives = 17/19 (89%)
Query: 80 EEIRRNLAEFRQRSTVPPP 98
+ + +NLA+F++RSTVPPP
Sbjct: 95 QNLGKNLAKFQRRSTVPPP 113
Score = 46 (21.3 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 1 MALHLFKPKHRSLTNPSLIHLF 22
MALHL + R +N SLI F
Sbjct: 1 MALHLARRHQRLPSNTSLIRFF 22
>TIGR_CMR|CHY_1760 [details] [associations]
symbol:CHY_1760 "ribosomal protein S15" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312
PROSITE:PS00362 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956
eggNOG:COG0184 ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10
RefSeq:YP_360580.1 ProteinModelPortal:Q3ABA4 SMR:Q3ABA4
STRING:Q3ABA4 GeneID:3726879 KEGG:chy:CHY_1760 PATRIC:21276633
OMA:INRLNEH BioCyc:CHYD246194:GJCN-1759-MONOMER Uniprot:Q3ABA4
Length = 89
Score = 136 (52.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/91 (37%), Positives = 50/91 (54%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
M+ ++ K+E+ ++++ E D GS VQIA LT +I L+ L HKKD HSR+GL
Sbjct: 1 MALTQEQKMEIIS---KYQLHEKDTGSPEVQIAILTERINQLTEHLKVHKKDFHSRRGLL 57
Query: 398 AMVQXXXXXXXXXXXTDWDSYCFVLSKLGLR 428
MV D++ Y ++ KLGLR
Sbjct: 58 KMVGQRRSLLNYLKRKDFERYRAIVEKLGLR 88
>UNIPROTKB|P0ADZ4 [details] [associations]
symbol:rpsO species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0019843 "rRNA
binding" evidence=IEA;IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0006378 EMBL:U18997
GO:GO:0003735 GO:GO:0019843 PDB:3J00 PDBsum:3J00 PDB:3FIH PDB:3IZV
PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627
EMBL:X13775 EMBL:J02638 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 EMBL:X00761 EMBL:M14425 PDB:3SFS PDB:3UOQ
PDBsum:3SFS PDBsum:3UOQ PDB:1EG0 PDBsum:1EG0 HAMAP:MF_01343_B
TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956 PDB:4GAS PDB:4GD1
PDBsum:4GAS PDBsum:4GD1 PDB:1P6G PDB:1P87 PDB:2AVY PDB:2AW7
PDB:2GY9 PDB:2GYB PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD
PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0
PDB:2WWL PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A PDB:3E1C
PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1P6G PDBsum:1P87 PDBsum:2AVY PDBsum:2AW7
PDBsum:2GY9 PDBsum:2GYB PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2WWL
PDBsum:2Z4K PDBsum:2Z4M PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A
PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S
PDBsum:3I1Z PDBsum:3I21 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ
PDBsum:3OAR PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP
PDBsum:3OFX PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I
PDBsum:4ADV PDBsum:4GAQ PDBsum:4GD2 eggNOG:COG0184
ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10 OMA:LKMVSRR EMBL:X01073
PIR:B26118 RefSeq:NP_417634.1 RefSeq:YP_491352.1 PDB:2VAZ
PDBsum:2VAZ ProteinModelPortal:P0ADZ4 SMR:P0ADZ4 DIP:DIP-47909N
IntAct:P0ADZ4 MINT:MINT-1299353 PaxDb:P0ADZ4 PRIDE:P0ADZ4
EnsemblBacteria:EBESCT00000001882 EnsemblBacteria:EBESCT00000001883
EnsemblBacteria:EBESCT00000001885 EnsemblBacteria:EBESCT00000002007
EnsemblBacteria:EBESCT00000016345 GeneID:12933439 GeneID:947686
KEGG:ecj:Y75_p3087 KEGG:eco:b3165 PATRIC:32121748 EchoBASE:EB0907
EcoGene:EG10914 BioCyc:EcoCyc:EG10914-MONOMER
BioCyc:ECOL316407:JW3134-MONOMER EvolutionaryTrace:P0ADZ4
Genevestigator:P0ADZ4 Uniprot:P0ADZ4
Length = 89
Score = 135 (52.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 33/80 (41%), Positives = 41/80 (51%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQXXXXXXX 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV
Sbjct: 9 AKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 XXXXTDWDSYCFVLSKLGLR 428
D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTQLIERLGLR 88
>TIGR_CMR|CBU_0851 [details] [associations]
symbol:CBU_0851 "ribosomal protein S15" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000589 InterPro:IPR005290
Pfam:PF00312 PROSITE:PS00362 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956
eggNOG:COG0184 ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10
OMA:LKMVSRR RefSeq:NP_819871.1 ProteinModelPortal:Q83D88 SMR:Q83D88
PRIDE:Q83D88 GeneID:1208744 KEGG:cbu:CBU_0851 PATRIC:17930399
BioCyc:CBUR227377:GJ7S-846-MONOMER Uniprot:Q83D88
Length = 89
Score = 132 (51.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 349 ELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXX 406
E AK+ +E+++ + D GS VQ+A LT KI L+ + HK D HSR+GL MV
Sbjct: 7 ETAKIVKEYQLGKDDTGSPEVQVAILTAKIIKLTDHMKAHKHDHHSRRGLLRMVSQRRKL 66
Query: 407 XXXXXXTDWDSYCFVLSKLGLR 428
D Y ++ +LGLR
Sbjct: 67 LNFLKRNDLQRYLKLIERLGLR 88
>TIGR_CMR|CPS_2206 [details] [associations]
symbol:CPS_2206 "ribosomal protein S15" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 HAMAP:MF_01343_B TIGRFAMs:TIGR00952
HOGENOM:HOG000040097 KO:K02956 eggNOG:COG0184 ProtClustDB:PRK05626
PANTHER:PTHR23321:SF10 OMA:LKMVSRR RefSeq:YP_268931.1
ProteinModelPortal:Q482T6 SMR:Q482T6 STRING:Q482T6 PRIDE:Q482T6
GeneID:3519898 KEGG:cps:CPS_2206 PATRIC:21467527
BioCyc:CPSY167879:GI48-2276-MONOMER Uniprot:Q482T6
Length = 89
Score = 130 (50.8 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 33/82 (40%), Positives = 41/82 (50%)
Query: 349 ELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXX 406
E A + E+ SE D GS VQ+A LTT+I HL H D HSR+GL MV
Sbjct: 7 EKAAIVAEYAQSEGDTGSPEVQVALLTTQINHLQGHFKAHIHDHHSRRGLLRMVAQRRKL 66
Query: 407 XXXXXXTDWDSYCFVLSKLGLR 428
+ D Y ++ KLGLR
Sbjct: 67 LDYLKGKNVDRYGALIGKLGLR 88
>TIGR_CMR|BA_3945 [details] [associations]
symbol:BA_3945 "ribosomal protein S15" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HAMAP:MF_01343_B
TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956 eggNOG:COG0184
ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10 RefSeq:NP_846189.1
RefSeq:YP_020584.1 RefSeq:YP_029910.1 ProteinModelPortal:Q81WM7
SMR:Q81WM7 DNASU:1086841 EnsemblBacteria:EBBACT00000010824
EnsemblBacteria:EBBACT00000015276 EnsemblBacteria:EBBACT00000020741
GeneID:1086841 GeneID:2814412 GeneID:2852223 KEGG:ban:BA_3945
KEGG:bar:GBAA_3945 KEGG:bat:BAS3659 OMA:LKMVSRR
BioCyc:BANT260799:GJAJ-3717-MONOMER
BioCyc:BANT261594:GJ7F-3833-MONOMER Uniprot:Q81WM7
Length = 89
Score = 127 (49.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/75 (42%), Positives = 42/75 (56%)
Query: 356 EFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXXXXXXXXT 413
+F+ E+D GS VQIA LT +I L+ L HKKD HSR+GL MV +
Sbjct: 14 QFRTHETDTGSPEVQIAVLTEQINTLNEHLRTHKKDHHSRRGLLKMVGKRRNLLTYLRNS 73
Query: 414 DWDSYCFVLSKLGLR 428
D Y +++KLGLR
Sbjct: 74 DITRYRELITKLGLR 88
>UNIPROTKB|Q9KU77 [details] [associations]
symbol:rpsO "30S ribosomal protein S15" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000589 InterPro:IPR005290
Pfam:PF00312 PROSITE:PS00362 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 KO:K02956 eggNOG:COG0184
ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10 OMA:LKMVSRR PIR:D82298
RefSeq:NP_230295.1 ProteinModelPortal:Q9KU77 SMR:Q9KU77
PRIDE:Q9KU77 DNASU:2615436 GeneID:2615436 KEGG:vch:VC0646
PATRIC:20080405 Uniprot:Q9KU77
Length = 89
Score = 122 (48.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 31/80 (38%), Positives = 38/80 (47%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXXXX 408
A + E+ E+D GS VQIA LT I HL HK D HSR+GL MV
Sbjct: 9 AAIVAEYARCENDTGSPEVQIALLTASINHLQGHFQAHKGDHHSRRGLLRMVSSRRKLLD 68
Query: 409 XXXXTDWDSYCFVLSKLGLR 428
D Y ++ +LGLR
Sbjct: 69 YLKGKDLSRYQDLIKRLGLR 88
>TIGR_CMR|SO_1207 [details] [associations]
symbol:SO_1207 "ribosomal protein S15" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 HAMAP:MF_01343_B TIGRFAMs:TIGR00952
HOGENOM:HOG000040097 KO:K02956 eggNOG:COG0184 ProtClustDB:PRK05626
PANTHER:PTHR23321:SF10 OMA:LKMVSRR RefSeq:NP_716831.1
ProteinModelPortal:Q8EHL3 SMR:Q8EHL3 GeneID:1169035
KEGG:son:SO_1207 PATRIC:23522072 Uniprot:Q8EHL3
Length = 89
Score = 122 (48.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 31/80 (38%), Positives = 39/80 (48%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXXXX 408
AK+ EF +D GS VQ+A LT +I HL H D HSR+GL MV
Sbjct: 9 AKILAEFGRGANDTGSTEVQVALLTAQINHLQDHFKEHIHDHHSRRGLLRMVSARRKLLA 68
Query: 409 XXXXTDWDSYCFVLSKLGLR 428
T+ Y ++ KLGLR
Sbjct: 69 YLKRTEAVRYNELIQKLGLR 88
>TIGR_CMR|VC_0646 [details] [associations]
symbol:VC_0646 "ribosomal protein S15" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 HAMAP:MF_01343_B TIGRFAMs:TIGR00952 KO:K02956
eggNOG:COG0184 ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10
OMA:LKMVSRR PIR:D82298 RefSeq:NP_230295.1 ProteinModelPortal:Q9KU77
SMR:Q9KU77 PRIDE:Q9KU77 DNASU:2615436 GeneID:2615436
KEGG:vch:VC0646 PATRIC:20080405 Uniprot:Q9KU77
Length = 89
Score = 122 (48.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 31/80 (38%), Positives = 38/80 (47%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXXXX 408
A + E+ E+D GS VQIA LT I HL HK D HSR+GL MV
Sbjct: 9 AAIVAEYARCENDTGSPEVQIALLTASINHLQGHFQAHKGDHHSRRGLLRMVSSRRKLLD 68
Query: 409 XXXXTDWDSYCFVLSKLGLR 428
D Y ++ +LGLR
Sbjct: 69 YLKGKDLSRYQDLIKRLGLR 88
>TIGR_CMR|GSU_1592 [details] [associations]
symbol:GSU_1592 "ribosomal protein S15" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000589
InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0019843 Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956
eggNOG:COG0184 ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10
OMA:INRLNEH RefSeq:NP_952643.1 ProteinModelPortal:Q74CT0 SMR:Q74CT0
PRIDE:Q74CT0 GeneID:2685309 KEGG:gsu:GSU1592 PATRIC:22026029
BioCyc:GSUL243231:GH27-1633-MONOMER Uniprot:Q74CT0
Length = 88
Score = 121 (47.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 358 KMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQXXXXXXXXXXXTDW 415
K+ +SD GS VQIA LT +I +L+ +HKKD HSR+GL +V D
Sbjct: 15 KLHDSDTGSPEVQIALLTERIIYLTEHFKVHKKDHHSRRGLLKIVGQRRRLLDYLKKKDV 74
Query: 416 DSYCFVLSKLGLR 428
+ Y ++ KLG+R
Sbjct: 75 ERYRSIIEKLGIR 87
>TIGR_CMR|APH_0768 [details] [associations]
symbol:APH_0768 "ribosomal protein S15" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0019843 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HAMAP:MF_01343_B
TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956 eggNOG:COG0184
RefSeq:YP_505347.1 ProteinModelPortal:Q2GJV4 STRING:Q2GJV4
GeneID:3930179 KEGG:aph:APH_0768 PATRIC:20950228 OMA:LFMKNSK
ProtClustDB:PRK05626 BioCyc:APHA212042:GHPM-784-MONOMER
PANTHER:PTHR23321:SF10 Uniprot:Q2GJV4
Length = 93
Score = 118 (46.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/93 (36%), Positives = 48/93 (51%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
MS K EL E+++ E D GSA VQ A L+ +I++L+ L HKKD H R+GL
Sbjct: 1 MSITPSKKSELIS---EYRIKEGDTGSAYVQCAILSERIRNLTEHLRIHKKDYHCRRGLM 57
Query: 398 AMV-QXXXXXXXXXXXTDWDSYCFVLSKLGLRD 429
+V + D Y ++ KLG+RD
Sbjct: 58 VLVCKRRKRLQYIKNKYGSDLYLDLVKKLGIRD 90
>TIGR_CMR|SPO_3840 [details] [associations]
symbol:SPO_3840 "ribosomal protein S15" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR000589
InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956
eggNOG:COG0184 ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10
OMA:INRLNEH RefSeq:YP_169028.1 ProteinModelPortal:Q5LLT1 SMR:Q5LLT1
PRIDE:Q5LLT1 GeneID:3196119 KEGG:sil:SPO3840 PATRIC:23381183
Uniprot:Q5LLT1
Length = 89
Score = 114 (45.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 349 ELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXX 406
E A+V +E+ + D GS VQ+A L+++I L+ HKKD H R+GL +V
Sbjct: 7 EKARVMKEYGTKDGDTGSPEVQVAILSSRIATLTEHFKTHKKDNHGRRGLLKLVAQRRKL 66
Query: 407 XXXXXXTDWDSYCFVLSKLGLR 428
D Y ++ +LGLR
Sbjct: 67 LDYLKAKDEARYQSLIERLGLR 88
>UNIPROTKB|P66429 [details] [associations]
symbol:rpsO "30S ribosomal protein S15" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312
PROSITE:PS00362 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956
eggNOG:COG0184 ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10
OMA:INRLNEH PIR:H70883 RefSeq:NP_217301.1 RefSeq:NP_337360.1
RefSeq:YP_006516231.1 ProteinModelPortal:P66429 SMR:P66429
PRIDE:P66429 EnsemblBacteria:EBMYCT00000000117
EnsemblBacteria:EBMYCT00000072434 GeneID:13317570 GeneID:888455
GeneID:925427 KEGG:mtc:MT2855 KEGG:mtu:Rv2785c KEGG:mtv:RVBD_2785c
PATRIC:18128032 TubercuList:Rv2785c Uniprot:P66429
Length = 89
Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 352 KVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXXXXX 409
++ + + E+D GS QIA LT +I L+ L HK D HSR+GL +V
Sbjct: 10 EILRSYGLHETDTGSPEAQIALLTKRIADLTEHLKVHKHDHHSRRGLLLLVGRRRRLIKY 69
Query: 410 XXXTDWDSYCFVLSKLGLR 428
D + Y ++ +LGLR
Sbjct: 70 ISQIDVERYRSLIERLGLR 88
>TIGR_CMR|CJE_0964 [details] [associations]
symbol:CJE_0964 "ribosomal protein S15" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312
PROSITE:PS00362 GO:GO:0006412 GO:GO:0005840 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:1.10.287.10 InterPro:IPR009068 SUPFAM:SSF47060
HAMAP:MF_01343_B TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956
eggNOG:COG0184 ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10
OMA:LKMVSRR RefSeq:YP_178962.1 ProteinModelPortal:Q5HUS3 SMR:Q5HUS3
STRING:Q5HUS3 GeneID:3231475 KEGG:cjr:CJE0964 PATRIC:20043707
BioCyc:CJEJ195099:GJC0-982-MONOMER Uniprot:Q5HUS3
Length = 90
Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
+ SA+K +I +AK F D GS VQ+A LT +I L+ L +KKD SR GL
Sbjct: 3 LDSAKKAEI-VAK----FAKKPGDTGSTEVQVALLTARIAELTEHLKIYKKDFSSRLGLL 57
Query: 398 AMVQXXXXXXXXXXXTDWDSYCFVLSKLGLRD 429
+V D++SY ++++L LRD
Sbjct: 58 KLVGQRKRLLSYLKRKDYNSYSKLITELNLRD 89
>SGD|S000002745 [details] [associations]
symbol:MRPS28 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IPI] [GO:0032543 "mitochondrial translation"
evidence=IC] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=IPI] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000589 InterPro:IPR005290
Pfam:PF00312 PROSITE:PS00362 SGD:S000002745 EMBL:BK006938
GO:GO:0003723 GO:GO:0003735 GO:GO:0032543 GO:GO:0019843
GO:GO:0005763 EMBL:U51032 KO:K08139 RefSeq:NP_010629.3
GeneID:851943 KEGG:sce:YDR342C Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HAMAP:MF_01343_B
TIGRFAMs:TIGR00952 eggNOG:COG0184 GeneTree:ENSGT00390000001737
OrthoDB:EOG4CRQ89 EMBL:X55977 EMBL:M38016 EMBL:AY557743 PIR:S12797
RefSeq:NP_010624.3 ProteinModelPortal:P21771 SMR:P21771
DIP:DIP-3889N IntAct:P21771 MINT:MINT-495602 STRING:P21771
PaxDb:P21771 EnsemblFungi:YDR337W GeneID:851937 KEGG:sce:YDR337W
CYGD:YDR337w HOGENOM:HOG000248865 OMA:DRRYMQD NextBio:970010
Genevestigator:P21771 GermOnline:YDR337W Uniprot:P21771
Length = 286
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 293 LARIQIEKEEKARVQRINILEGFGGTPEYLLHPPKEHLVE--KYFHPDNMSSAEKMKIEL 350
LA I+ K E+A + +N E G L +E ++ + +N +A KM +EL
Sbjct: 102 LAAIESAKRERAELSGLNT-EVVGIEDIEKLEDRREAILRILSMRNSEN-KNAIKMAVEL 159
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXXXXXX 408
A R+EF+ D GS+ VQ A +T +I+++++ + H+KD + + L+ +VQ
Sbjct: 160 A--RKEFERFPGDTGSSEVQAACMTVRIQNMANHIKEHRKDFANTRNLRILVQQRQAILR 217
Query: 409 XXXXTDWDSYCFVLSKLGLRD 429
+ + Y + + KLGL D
Sbjct: 218 YLKRDNPEKYYWTIQKLGLND 238
>TIGR_CMR|ECH_0727 [details] [associations]
symbol:ECH_0727 "ribosomal protein S15" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:1.10.287.10 InterPro:IPR009068
SUPFAM:SSF47060 HAMAP:MF_01343_B TIGRFAMs:TIGR00952
HOGENOM:HOG000040097 KO:K02956 eggNOG:COG0184 ProtClustDB:PRK05626
PANTHER:PTHR23321:SF10 OMA:LKMVSRR RefSeq:YP_507530.1
ProteinModelPortal:Q2GGA3 STRING:Q2GGA3 GeneID:3927051
KEGG:ech:ECH_0727 PATRIC:20576898
BioCyc:ECHA205920:GJNR-730-MONOMER Uniprot:Q2GGA3
Length = 93
Score = 108 (43.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
MS + K EL E+ + + D GS+ VQ A L+ +I++L+ L HKKD H R+GL
Sbjct: 1 MSITRERKSELIS---EYCLKKDDTGSSFVQCAILSERIRNLTEHLKVHKKDFHCRRGLM 57
Query: 398 AMVQXXXXXXXXXXXTDWDS-YCFVLSKLGLRD 429
+V DS Y ++ +LG+RD
Sbjct: 58 VLVCRRRNVLQYVRKKYGDSEYLALIKRLGIRD 90
>TIGR_CMR|DET_0969 [details] [associations]
symbol:DET_0969 "ribosomal protein S15" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000589 InterPro:IPR005290 Pfam:PF00312 PROSITE:PS00362
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0019843 Gene3D:1.10.287.10
InterPro:IPR009068 SUPFAM:SSF47060 HAMAP:MF_01343_B
TIGRFAMs:TIGR00952 HOGENOM:HOG000040097 KO:K02956 eggNOG:COG0184
ProtClustDB:PRK05626 PANTHER:PTHR23321:SF10 OMA:LKMVSRR
RefSeq:YP_181692.1 ProteinModelPortal:Q3Z7V7 STRING:Q3Z7V7
GeneID:3229687 KEGG:det:DET0969 PATRIC:21608987
BioCyc:DETH243164:GJNF-970-MONOMER Uniprot:Q3Z7V7
Length = 87
Score = 105 (42.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 347 KIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQXXX 404
K E + + EFK SE+D GS VQ+A LT +I L++ + +K D H+++ L +V
Sbjct: 3 KQEKSLIINEFKKSENDTGSTEVQVALLTARIHQLTTHMIANKHDFHTKRSLLTLVGRRR 62
Query: 405 XXXXXXXXTDWDSYCFVLSKLGLR 428
+ Y +++ LGLR
Sbjct: 63 RLLSYMRNNNGAGYQELIANLGLR 86
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 437 329 0.00089 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 606 (64 KB)
Total size of DFA: 196 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.31u 0.09s 24.40t Elapsed: 00:00:01
Total cpu time: 24.31u 0.09s 24.40t Elapsed: 00:00:01
Start: Tue May 21 06:01:42 2013 End: Tue May 21 06:01:43 2013