BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013758
(437 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7IFB5|RS15_THEAB 30S ribosomal protein S15 OS=Thermosipho africanus (strain TCF52B)
GN=rpsO PE=3 SV=1
Length = 84
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ +EF++ E D GS VQIA LT +IKHL+ L H KD HSR+GL +V RR+++LKYL
Sbjct: 6 IIKEFQIHEGDTGSTEVQIALLTARIKHLTEHLKKHPKDYHSRRGLMKLVGRRRKILKYL 65
Query: 411 RRTDWDSYCFVLSKLGLR 428
R D +SY V+ KLGLR
Sbjct: 66 RNKDPESYKNVIQKLGLR 83
>sp|A6LJ39|RS15_THEM4 30S ribosomal protein S15 OS=Thermosipho melanesiensis (strain
BI429 / DSM 12029) GN=rpsO PE=3 SV=1
Length = 84
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ +EF++ E D GSA VQ+A LT +IKHL+ L H KD HSR+GL +V RR+++LKYL
Sbjct: 6 IIKEFQIHEGDTGSAEVQVALLTARIKHLTEHLKKHPKDYHSRRGLMKLVGRRRKILKYL 65
Query: 411 RRTDWDSYCFVLSKLGLR 428
R + ++Y V+ KLGLR
Sbjct: 66 RNKNPEAYKEVIQKLGLR 83
>sp|Q7VKX3|RS15_HAEDU 30S ribosomal protein S15 OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=rpsO PE=3 SV=1
Length = 89
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AKIVSEFGRDAKDTGSSEVQIALLTAQINHLQTHFATHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLAKYSETIARLGLR 88
>sp|Q5WT39|RS15_LEGPL 30S ribosomal protein S15 OS=Legionella pneumophila (strain Lens)
GN=rpsO PE=3 SV=1
Length = 91
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
++SAEK A++ E+K + D GS VQ++ +T++IK+L+ +KKD HSR+GLQ
Sbjct: 3 LNSAEK-----AEIINEYKRGDKDTGSPEVQVSLITSRIKYLTDHFKENKKDFHSRRGLQ 57
Query: 398 AMVQRRKRLLKYLRRTDWDSYCFVLSKLGLRD 429
+V +R++LLKYL+R D D Y ++ LGLRD
Sbjct: 58 ELVNKRRKLLKYLKRNDQDRYQTLIQNLGLRD 89
>sp|Q5ZRV7|RS15_LEGPH 30S ribosomal protein S15 OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=rpsO PE=3 SV=1
Length = 91
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
++SAEK A++ E+K + D GS VQ++ +T++IK+L+ +KKD HSR+GLQ
Sbjct: 3 LNSAEK-----AEIINEYKRGDKDTGSPEVQVSLITSRIKYLTDHFKENKKDFHSRRGLQ 57
Query: 398 AMVQRRKRLLKYLRRTDWDSYCFVLSKLGLRD 429
+V +R++LLKYL+R D D Y ++ LGLRD
Sbjct: 58 ELVNKRRKLLKYLKRNDQDRYQTLIQNLGLRD 89
>sp|A5IHU4|RS15_LEGPC 30S ribosomal protein S15 OS=Legionella pneumophila (strain Corby)
GN=rpsO PE=3 SV=1
Length = 91
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
++SAEK A++ E+K + D GS VQ++ +T++IK+L+ +KKD HSR+GLQ
Sbjct: 3 LNSAEK-----AEIINEYKRGDKDTGSPEVQVSLITSRIKYLTDHFKENKKDFHSRRGLQ 57
Query: 398 AMVQRRKRLLKYLRRTDWDSYCFVLSKLGLRD 429
+V +R++LLKYL+R D D Y ++ LGLRD
Sbjct: 58 ELVNKRRKLLKYLKRNDQDRYQTLIQNLGLRD 89
>sp|A6VQB6|RS15_ACTSZ 30S ribosomal protein S15 OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=rpsO PE=3 SV=1
Length = 89
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL S A HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQSHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y ++++LGLR
Sbjct: 69 YLKRTDLAKYSEIIARLGLR 88
>sp|B8F5Z2|RS15_HAEPS 30S ribosomal protein S15 OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=rpsO PE=3 SV=1
Length = 89
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLAKYSETIARLGLR 88
>sp|B0BPU4|RS15_ACTPJ 30S ribosomal protein S15 OS=Actinobacillus pleuropneumoniae
serotype 3 (strain JL03) GN=rpsO PE=3 SV=1
Length = 89
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLAKYSETIARLGLR 88
>sp|B3H1N7|RS15_ACTP7 30S ribosomal protein S15 OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=rpsO PE=3 SV=1
Length = 89
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLAKYSETIARLGLR 88
>sp|A3N113|RS15_ACTP2 30S ribosomal protein S15 OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=rpsO PE=3 SV=1
Length = 89
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLAKYSETIARLGLR 88
>sp|Q9CNX1|RS15_PASMU 30S ribosomal protein S15 OS=Pasteurella multocida (strain Pm70)
GN=rpsO PE=3 SV=1
Length = 89
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL S A HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQSHFATHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RT+ + Y +++LGLR
Sbjct: 69 YLKRTNLELYTSTIARLGLR 88
>sp|B0USL5|RS15_HAES2 30S ribosomal protein S15 OS=Haemophilus somnus (strain 2336)
GN=rpsO PE=3 SV=1
Length = 89
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL + HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFSTHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y ++++LGLR
Sbjct: 69 YLKRTDLAKYSEIIARLGLR 88
>sp|Q0I275|RS15_HAES1 30S ribosomal protein S15 OS=Haemophilus somnus (strain 129Pt)
GN=rpsO PE=3 SV=1
Length = 89
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL + HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFSTHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y ++++LGLR
Sbjct: 69 YLKRTDLAKYSEIIARLGLR 88
>sp|B5XSX7|RS15_KLEP3 30S ribosomal protein S15 OS=Klebsiella pneumoniae (strain 342)
GN=rpsO PE=3 SV=1
Length = 89
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF E+D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRGENDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYAALIERLGLR 88
>sp|Q1AW49|RS15_RUBXD 30S ribosomal protein S15 OS=Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129) GN=rpsO PE=3 SV=1
Length = 88
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 356 EFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYLRRT 413
EF+ E D GS VQ+A LT +I HL+ L HK D HSR+GL MV +R+RLLKYL++
Sbjct: 13 EFRTHEGDTGSPEVQVAILTRRIAHLTEHLREHKHDYHSRRGLLKMVGKRRRLLKYLQKK 72
Query: 414 DWDSYCFVLSKLGLR 428
D + Y ++S+LGLR
Sbjct: 73 DVERYRTLISRLGLR 87
>sp|B1LBY1|RS15_THESQ 30S ribosomal protein S15 OS=Thermotoga sp. (strain RQ2) GN=rpsO
PE=3 SV=1
Length = 90
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ +EF++ E+D GS VQIA LT +IKHL+ L H KD HSR+GL M+ RR+++LKYL
Sbjct: 12 IIKEFQIHENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYL 71
Query: 411 RRTDWDSYCFVLSKLGLR 428
R + Y +++KLG+R
Sbjct: 72 RHKKPEVYRELIAKLGIR 89
>sp|A5IMM9|RS15_THEP1 30S ribosomal protein S15 OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=rpsO PE=3 SV=1
Length = 90
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ +EF++ E+D GS VQIA LT +IKHL+ L H KD HSR+GL M+ RR+++LKYL
Sbjct: 12 IIKEFQIHENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYL 71
Query: 411 RRTDWDSYCFVLSKLGLR 428
R + Y +++KLG+R
Sbjct: 72 RHKKPEVYRELIAKLGIR 89
>sp|Q9X165|RS15_THEMA 30S ribosomal protein S15 OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=rpsO PE=3 SV=1
Length = 90
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ +EF++ E+D GS VQIA LT +IKHL+ L H KD HSR+GL M+ RR+++LKYL
Sbjct: 12 IIKEFQIHENDTGSVEVQIALLTARIKHLTEHLRKHPKDFHSRRGLMKMIGRRRKMLKYL 71
Query: 411 RRTDWDSYCFVLSKLGLR 428
R + Y +++KLG+R
Sbjct: 72 RHKKPEVYRELIAKLGIR 89
>sp|A6TEI4|RS15_KLEP7 30S ribosomal protein S15 OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=rpsO PE=3
SV=1
Length = 89
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF E+D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRGENDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYSALIERLGLR 88
>sp|A9BH72|RS15_PETMO 30S ribosomal protein S15 OS=Petrotoga mobilis (strain DSM 10674 /
SJ95) GN=rpsO PE=3 SV=1
Length = 91
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 355 EEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYLRR 412
EEFK+++ D GS VQ+A L+ +IKHL+ L H KD HSR+GL MV +R+++LKYLR+
Sbjct: 15 EEFKINDKDTGSVEVQVALLSARIKHLTEHLKQHPKDYHSRRGLMMMVGKRRKMLKYLRK 74
Query: 413 TDWDSYCFVLSKLGLR 428
+ Y +++KLG+R
Sbjct: 75 SKPLVYQEIINKLGIR 90
>sp|Q65UQ4|RS15_MANSM 30S ribosomal protein S15 OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=rpsO PE=3 SV=1
Length = 89
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLAKYSETIARLGLR 88
>sp|B5YEA9|RS15_DICT6 30S ribosomal protein S15 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rpsO PE=3 SV=1
Length = 89
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ E+F+++E+D GS VQIA LT +IK L+ L HKKD HSR GL M+ RR++LLKYL
Sbjct: 11 IIEKFRLNENDSGSPEVQIALLTERIKRLTEHLKVHKKDYHSRVGLLKMIGRRRKLLKYL 70
Query: 411 RRTDWDSYCFVLSKLGLR 428
+ D++ Y ++ +LGLR
Sbjct: 71 QEKDFERYKKLIQELGLR 88
>sp|B8CW77|RS15_HALOH 30S ribosomal protein S15 OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=rpsO PE=3 SV=1
Length = 88
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ EE+++ E D GS VQ+A LT +IK+L+ L HK D HSR+GL MV +RK+LL+YL
Sbjct: 10 IIEEYQLEEGDTGSPEVQVALLTARIKNLTEHLKEHKHDYHSRRGLLKMVGKRKKLLRYL 69
Query: 411 RRTDWDSYCFVLSKLGLR 428
+R D + Y ++++LG+R
Sbjct: 70 KRKDINRYRDLINRLGIR 87
>sp|B8E2S4|RS15_DICTD 30S ribosomal protein S15 OS=Dictyoglomus turgidum (strain Z-1310 /
DSM 6724) GN=rpsO PE=3 SV=1
Length = 89
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 353 VREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYL 410
+ E+F+++E+D GS VQIA LT +IK L+ L HKKD HSR GL M+ RR++LLKYL
Sbjct: 11 IIEKFRLNENDSGSPEVQIALLTERIKKLTEHLKVHKKDYHSRVGLLKMIGRRRKLLKYL 70
Query: 411 RRTDWDSYCFVLSKLGLR 428
+ D++ Y ++ +LGLR
Sbjct: 71 QEKDFERYKKLIQELGLR 88
>sp|P05766|RS15_GEOSE 30S ribosomal protein S15 OS=Geobacillus stearothermophilus GN=rpsO
PE=1 SV=3
Length = 89
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 355 EEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYLRR 412
E+FK+ E+D GS VQIA LT +I +L+ L HKKD HSR+GL MV +R+RLL YLR
Sbjct: 13 EQFKVHENDTGSPEVQIAILTEQINNLNEHLRVHKKDHHSRRGLLKMVGKRRRLLAYLRN 72
Query: 413 TDWDSYCFVLSKLGLR 428
D Y ++ KLGLR
Sbjct: 73 KDVARYREIVEKLGLR 88
>sp|P44389|RS15_HAEIN 30S ribosomal protein S15 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rpsO1 PE=3 SV=2
Length = 89
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQTHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLALYQSTIARLGLR 88
>sp|A5UEY4|RS15_HAEIG 30S ribosomal protein S15 OS=Haemophilus influenzae (strain PittGG)
GN=rpsO PE=3 SV=1
Length = 89
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQTHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLALYQSTIARLGLR 88
>sp|Q4QKJ8|RS15_HAEI8 30S ribosomal protein S15 OS=Haemophilus influenzae (strain
86-028NP) GN=rpsO PE=3 SV=1
Length = 89
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
A + EF D GS+ VQIA LT +I HL + A HKKD H R+GL MV RR++LL
Sbjct: 9 AAIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFAEHKKDHHGRRGLLRMVSRRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+RTD Y +++LGLR
Sbjct: 69 YLKRTDLALYQSTIARLGLR 88
>sp|Q4FNM7|RS15_PELUB 30S ribosomal protein S15 OS=Pelagibacter ubique (strain HTCC1062)
GN=rpsO PE=3 SV=1
Length = 82
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 350 LAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLL 407
+ K EE KM E D GS+ VQIA LT KI+ LS+ + KKDKHS GL V RRK+LL
Sbjct: 1 MTKKAEELKMHEKDTGSSEVQIALLTGKIETLSAHIKQFKKDKHSSVGLLRAVNRRKKLL 60
Query: 408 KYLRRTDWDSYCFVLSKLGLR 428
+YL++ +DSY VL++L LR
Sbjct: 61 EYLKKNKFDSYKNVLTQLNLR 81
>sp|Q5X1C6|RS15_LEGPA 30S ribosomal protein S15 OS=Legionella pneumophila (strain Paris)
GN=rpsO PE=3 SV=1
Length = 91
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 7/92 (7%)
Query: 340 MSSAEKMKIELAKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQ 397
++SAEK A++ E+K + D GS VQ++ +T +IK+L+ +KKD HSR+GLQ
Sbjct: 3 LNSAEK-----AEIINEYKRGDKDTGSPEVQVSLITGRIKYLTDHFKENKKDFHSRRGLQ 57
Query: 398 AMVQRRKRLLKYLRRTDWDSYCFVLSKLGLRD 429
+V +R++LLKYL+R D Y ++ LGLRD
Sbjct: 58 ELVNKRRKLLKYLKRNDQARYQTLIQNLGLRD 89
>sp|A4WEY0|RS15_ENT38 30S ribosomal protein S15 OS=Enterobacter sp. (strain 638) GN=rpsO
PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRGTNDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|A8AQ54|RS15_CITK8 30S ribosomal protein S15 OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRGTNDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|O34274|RS15_YEREN 30S ribosomal protein S15 OS=Yersinia enterocolitica GN=rpsO PE=3
SV=3
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLK 408
AK+ +F +D GS+ VQ+A LT +I HL HKKD HSR+GL MV R++LL
Sbjct: 9 AKIVADFGRDANDTGSSEVQVALLTAQINHLQGHFSEHKKDHHSRRGLLRMVSTRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D SY ++ +LGLR
Sbjct: 69 YLKRKDVASYVSLIERLGLR 88
>sp|A1JIX2|RS15_YERE8 30S ribosomal protein S15 OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLK 408
AK+ +F +D GS+ VQ+A LT +I HL HKKD HSR+GL MV R++LL
Sbjct: 9 AKIVADFGRDANDTGSSEVQVALLTAQINHLQGHFSEHKKDHHSRRGLLRMVSTRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D SY ++ +LGLR
Sbjct: 69 YLKRKDVASYVSLIERLGLR 88
>sp|P66431|RS15_SALTY 30S ribosomal protein S15 OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=rpsO PE=3 SV=2
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|P66432|RS15_SALTI 30S ribosomal protein S15 OS=Salmonella typhi GN=rpsO PE=3 SV=2
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B4TWD4|RS15_SALSV 30S ribosomal protein S15 OS=Salmonella schwarzengrund (strain
CVM19633) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B5BGJ2|RS15_SALPK 30S ribosomal protein S15 OS=Salmonella paratyphi A (strain
AKU_12601) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|C0PZ51|RS15_SALPC 30S ribosomal protein S15 OS=Salmonella paratyphi C (strain
RKS4594) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|A9N729|RS15_SALPB 30S ribosomal protein S15 OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=rpsO PE=3 SV=2
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|Q5PLB3|RS15_SALPA 30S ribosomal protein S15 OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B4T6Z5|RS15_SALNS 30S ribosomal protein S15 OS=Salmonella newport (strain SL254)
GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B4TJ03|RS15_SALHS 30S ribosomal protein S15 OS=Salmonella heidelberg (strain SL476)
GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B5REN3|RS15_SALG2 30S ribosomal protein S15 OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B5QZV5|RS15_SALEP 30S ribosomal protein S15 OS=Salmonella enteritidis PT4 (strain
P125109) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B5FI10|RS15_SALDC 30S ribosomal protein S15 OS=Salmonella dublin (strain CT_02021853)
GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|Q57JI2|RS15_SALCH 30S ribosomal protein S15 OS=Salmonella choleraesuis (strain
SC-B67) GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|B5F6T5|RS15_SALA4 30S ribosomal protein S15 OS=Salmonella agona (strain SL483)
GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 351 AKVREEFKMSESDCGSARVQIAQLTTKIKHLSS--ALHKKDKHSRKGLQAMVQRRKRLLK 408
AK+ EF +D GS VQ+A LT +I HL A HKKD HSR+GL MV +R++LL
Sbjct: 9 AKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLD 68
Query: 409 YLRRTDWDSYCFVLSKLGLR 428
YL+R D Y ++ +LGLR
Sbjct: 69 YLKRKDVARYTALIERLGLR 88
>sp|A8FDD6|RS15_BACP2 30S ribosomal protein S15 OS=Bacillus pumilus (strain SAFR-032)
GN=rpsO PE=3 SV=1
Length = 89
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 356 EFKMSESDCGSARVQIAQLTTKIKHLSSAL--HKKDKHSRKGLQAMVQRRKRLLKYLRRT 413
EFK ESD GS VQIA LT I +L+ L HKKD HSR+GL MV RR+ LL YLR
Sbjct: 14 EFKTHESDTGSPEVQIAVLTESINNLNEHLRTHKKDHHSRRGLLKMVGRRRNLLTYLRNK 73
Query: 414 DWDSYCFVLSKLGLR 428
D Y +++KLGLR
Sbjct: 74 DVTRYRELINKLGLR 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,752,286
Number of Sequences: 539616
Number of extensions: 6507143
Number of successful extensions: 127838
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 966
Number of HSP's that attempted gapping in prelim test: 44671
Number of HSP's gapped (non-prelim): 36792
length of query: 437
length of database: 191,569,459
effective HSP length: 120
effective length of query: 317
effective length of database: 126,815,539
effective search space: 40200525863
effective search space used: 40200525863
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)