Query 013760
Match_columns 437
No_of_seqs 497 out of 2964
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 16:36:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013760.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013760hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 9E-37 3.1E-41 288.5 20.8 207 1-211 10-265 (282)
2 2dzn_A Probable 26S proteasome 100.0 5.2E-36 1.8E-40 274.7 24.1 207 1-211 3-215 (228)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-36 3.9E-41 284.6 19.6 208 1-212 11-231 (253)
4 3aji_A 26S proteasome non-ATPa 100.0 1.2E-35 4.1E-40 273.0 25.3 206 2-212 8-213 (231)
5 2xai_A ASB-9, ankyrin repeat a 100.0 1.2E-35 3.9E-40 279.2 22.7 204 1-212 4-207 (261)
6 3b7b_A Euchromatic histone-lys 100.0 5.3E-35 1.8E-39 269.7 24.3 207 1-212 12-218 (237)
7 3hra_A Ankyrin repeat family p 100.0 2.3E-35 7.8E-40 265.2 20.8 191 1-194 6-201 (201)
8 1k1a_A B-cell lymphoma 3-encod 100.0 5.1E-35 1.7E-39 270.2 23.1 205 1-210 10-222 (241)
9 2f8y_A Notch homolog 1, transl 100.0 6.4E-35 2.2E-39 266.6 23.4 194 1-199 26-219 (223)
10 2rfa_A Transient receptor pote 100.0 2.1E-35 7.1E-40 271.7 20.3 196 1-199 4-225 (232)
11 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-34 5.3E-39 275.2 22.4 204 1-212 60-263 (285)
12 3utm_A Tankyrase-1; tankyrase, 100.0 4.5E-34 1.5E-38 278.2 25.0 206 1-211 59-320 (351)
13 1s70_B 130 kDa myosin-binding 100.0 4.9E-35 1.7E-39 279.5 16.4 205 2-211 42-272 (299)
14 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-35 3.9E-40 274.5 11.6 194 1-198 9-211 (236)
15 3aji_A 26S proteasome non-ATPa 100.0 1.3E-34 4.5E-39 266.1 18.2 190 1-196 41-230 (231)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-34 8.1E-39 268.8 19.9 190 1-195 58-247 (253)
17 4b93_B Ankyrin repeat domain-c 100.0 8E-35 2.7E-39 274.9 16.7 205 2-211 13-225 (269)
18 1wdy_A 2-5A-dependent ribonucl 100.0 1.1E-32 3.7E-37 260.3 25.3 207 2-212 7-227 (285)
19 4g8k_A 2-5A-dependent ribonucl 100.0 3.8E-33 1.3E-37 271.5 22.0 196 2-198 27-300 (337)
20 1wdy_A 2-5A-dependent ribonucl 100.0 1.3E-32 4.6E-37 259.6 25.1 208 1-212 40-261 (285)
21 3ljn_A Hypothetical protein; a 100.0 1.6E-33 5.4E-38 277.2 18.8 205 1-212 21-252 (364)
22 2etb_A Transient receptor pote 100.0 6E-34 2E-38 266.2 15.0 192 2-197 4-247 (256)
23 2f8y_A Notch homolog 1, transl 100.0 1.7E-33 5.7E-38 257.2 17.7 198 10-211 1-198 (223)
24 3kea_A K1L; tropism, ANK repea 100.0 5.3E-34 1.8E-38 271.5 14.4 191 1-201 32-225 (285)
25 1k1a_A B-cell lymphoma 3-encod 100.0 1E-33 3.5E-38 261.4 15.6 190 1-195 47-240 (241)
26 4gpm_A Engineered protein OR26 100.0 3.9E-33 1.3E-37 244.6 18.3 158 37-198 6-163 (169)
27 2pnn_A Transient receptor pote 100.0 5.9E-34 2E-38 269.0 13.5 192 1-196 14-258 (273)
28 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-32 3.7E-37 277.8 23.6 204 1-210 147-350 (437)
29 3ljn_A Hypothetical protein; a 100.0 4.7E-33 1.6E-37 273.8 20.2 190 1-197 54-270 (364)
30 4b93_B Ankyrin repeat domain-c 100.0 5.5E-34 1.9E-38 269.2 11.5 191 1-196 53-244 (269)
31 2fo1_E LIN-12 protein; beta-ba 100.0 2.7E-33 9.1E-38 276.9 16.9 208 1-212 126-354 (373)
32 3utm_A Tankyrase-1; tankyrase, 100.0 3.3E-32 1.1E-36 265.0 24.0 206 2-212 26-288 (351)
33 2dzn_A Probable 26S proteasome 100.0 9.4E-33 3.2E-37 252.9 18.4 186 1-192 37-226 (228)
34 2fo1_E LIN-12 protein; beta-ba 100.0 6.6E-33 2.3E-37 274.1 18.6 193 1-197 167-372 (373)
35 3eu9_A Huntingtin-interacting 100.0 3.8E-32 1.3E-36 250.1 22.3 207 1-212 10-218 (240)
36 4gpm_A Engineered protein OR26 100.0 1.4E-32 5E-37 241.0 18.3 159 2-166 6-164 (169)
37 3b7b_A Euchromatic histone-lys 100.0 2.5E-32 8.6E-37 251.8 20.5 185 1-190 45-229 (237)
38 1n11_A Ankyrin; clathrin, BAND 100.0 3.5E-32 1.2E-36 274.0 23.2 204 1-210 15-218 (437)
39 3eu9_A Huntingtin-interacting 100.0 2.1E-32 7.1E-37 251.9 19.8 193 1-198 43-237 (240)
40 2xai_A ASB-9, ankyrin repeat a 100.0 1.3E-32 4.6E-37 258.2 18.3 187 1-197 37-223 (261)
41 3d9h_A CDNA FLJ77766, highly s 100.0 3.7E-32 1.3E-36 258.7 20.7 203 1-210 16-228 (285)
42 1oy3_D Transcription factor in 100.0 3.2E-32 1.1E-36 257.2 17.2 178 1-182 46-269 (282)
43 4g8k_A 2-5A-dependent ribonucl 100.0 2.2E-31 7.6E-36 259.0 23.0 192 1-199 60-329 (337)
44 3jxi_A Vanilloid receptor-rela 100.0 4.4E-33 1.5E-37 260.8 10.5 193 2-198 7-252 (260)
45 4hbd_A KN motif and ankyrin re 100.0 2E-32 6.9E-37 259.4 13.7 191 2-195 78-274 (276)
46 3v30_A DNA-binding protein rfx 100.0 1.5E-31 5.1E-36 234.6 16.4 168 2-174 4-171 (172)
47 2rfm_A Putative ankyrin repeat 100.0 3.2E-31 1.1E-35 236.8 14.5 164 27-194 27-190 (192)
48 3v30_A DNA-binding protein rfx 100.0 7.5E-31 2.6E-35 230.1 16.3 167 35-204 2-168 (172)
49 1s70_B 130 kDa myosin-binding 100.0 3.2E-31 1.1E-35 253.0 14.7 188 1-193 74-287 (299)
50 3v31_A Ankyrin repeat family A 100.0 1.6E-30 5.4E-35 226.9 15.5 160 34-197 2-161 (167)
51 3kea_A K1L; tropism, ANK repea 100.0 7.5E-31 2.6E-35 249.7 13.9 187 1-201 63-251 (285)
52 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.8E-30 2E-34 224.1 17.4 161 30-194 9-169 (169)
53 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.7E-30 9.2E-35 224.0 15.1 158 34-196 4-162 (162)
54 2rfa_A Transient receptor pote 100.0 1.6E-29 5.4E-34 232.4 20.1 175 34-211 2-204 (232)
55 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.1E-30 1.4E-34 222.8 14.6 156 2-163 7-162 (162)
56 3f6q_A Integrin-linked protein 100.0 7.7E-30 2.6E-34 225.3 15.2 165 34-201 4-168 (179)
57 3twr_A Tankyrase-2; ankyrin re 100.0 3.8E-30 1.3E-34 224.0 12.7 161 31-195 4-164 (165)
58 3hra_A Ankyrin repeat family p 100.0 5.4E-29 1.8E-33 223.5 19.9 180 32-212 2-186 (201)
59 3f6q_A Integrin-linked protein 100.0 1.3E-29 4.6E-34 223.8 15.3 166 1-171 6-171 (179)
60 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-30 8.1E-35 238.8 10.9 179 30-210 3-190 (236)
61 1awc_B Protein (GA binding pro 100.0 3.1E-29 1.1E-33 215.6 16.4 150 36-190 3-152 (153)
62 3v31_A Ankyrin repeat family A 100.0 3.9E-29 1.3E-33 218.0 16.2 157 1-163 4-160 (167)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 8.5E-29 2.9E-33 216.6 18.1 152 2-158 16-167 (169)
64 1awc_B Protein (GA binding pro 100.0 8.8E-29 3E-33 212.8 17.3 149 2-156 4-152 (153)
65 2rfm_A Putative ankyrin repeat 100.0 8.9E-29 3E-33 220.9 15.7 154 1-159 36-189 (192)
66 1sw6_A Regulatory protein SWI6 100.0 1.2E-29 4E-34 246.3 10.7 194 4-209 101-321 (327)
67 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.3E-28 4.6E-33 212.0 16.1 152 36-192 3-154 (156)
68 1sw6_A Regulatory protein SWI6 100.0 1.1E-29 3.6E-34 246.6 10.0 169 1-182 132-327 (327)
69 3twr_A Tankyrase-2; ankyrin re 100.0 6.6E-29 2.3E-33 216.1 13.9 154 2-161 10-163 (165)
70 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.3E-28 4.6E-33 212.0 15.6 151 2-158 4-154 (156)
71 2etb_A Transient receptor pote 100.0 1E-28 3.4E-33 230.7 12.8 177 35-212 2-229 (256)
72 2pnn_A Transient receptor pote 100.0 1.6E-28 5.5E-33 231.6 12.2 171 1-175 55-271 (273)
73 2vge_A RELA-associated inhibit 100.0 5.6E-31 1.9E-35 242.6 -5.2 180 2-189 23-206 (229)
74 4hbd_A KN motif and ankyrin re 100.0 8.7E-28 3E-32 227.5 15.1 157 1-161 112-274 (276)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.4E-28 4.7E-33 227.9 5.4 158 34-196 4-164 (239)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.4E-28 1.5E-32 224.5 7.9 168 1-175 6-176 (239)
77 3jxi_A Vanilloid receptor-rela 99.9 9.6E-28 3.3E-32 224.4 10.0 160 1-164 47-251 (260)
78 1bi7_B P16INK4A, MTS1, multipl 99.9 7.8E-27 2.7E-31 201.4 9.6 145 29-178 6-151 (156)
79 3t8k_A Uncharacterized protein 99.9 3.2E-27 1.1E-31 210.3 7.2 158 35-196 6-179 (186)
80 2vge_A RELA-associated inhibit 99.9 6.6E-28 2.3E-32 222.0 2.5 185 17-208 1-192 (229)
81 3t8k_A Uncharacterized protein 99.9 6.4E-27 2.2E-31 208.3 8.8 161 1-168 7-184 (186)
82 1d9s_A Cyclin-dependent kinase 99.9 5.5E-26 1.9E-30 191.4 10.8 129 64-196 7-136 (136)
83 1d9s_A Cyclin-dependent kinase 99.9 6.1E-26 2.1E-30 191.1 10.2 131 28-163 5-136 (136)
84 2aja_A Ankyrin repeat family p 99.9 1.5E-27 5.1E-32 235.1 -0.1 154 2-166 94-253 (376)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.3E-24 8E-29 177.8 14.8 124 69-195 2-125 (126)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.3E-24 7.8E-29 177.8 14.2 126 34-163 1-126 (126)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 7.5E-25 2.6E-29 188.9 10.7 140 64-207 7-147 (156)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 2E-24 6.7E-29 181.8 12.8 123 69-194 14-136 (136)
89 3deo_A Signal recognition part 99.9 4.5E-26 1.5E-30 202.0 2.0 165 7-193 7-181 (183)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 2E-24 6.7E-29 181.8 11.9 126 30-158 9-134 (136)
91 3ui2_A Signal recognition part 99.9 1.1E-25 3.6E-30 209.2 2.2 145 31-196 41-185 (244)
92 3c5r_A BARD-1, BRCA1-associate 99.9 1.8E-24 6.3E-29 182.1 7.1 125 65-192 6-130 (137)
93 2aja_A Ankyrin repeat family p 99.9 1.8E-25 6.2E-30 220.2 -1.1 177 3-198 68-252 (376)
94 3c5r_A BARD-1, BRCA1-associate 99.9 6.9E-24 2.3E-28 178.5 7.4 126 30-158 5-130 (137)
95 3ui2_A Signal recognition part 99.9 8.6E-23 3E-27 189.5 12.9 134 2-158 47-181 (244)
96 3deo_A Signal recognition part 99.9 6.1E-23 2.1E-27 181.8 11.3 134 2-158 46-180 (183)
97 3aaa_C Myotrophin, protein V-1 99.9 5.9E-23 2E-27 169.5 10.2 110 67-179 5-114 (123)
98 2b0o_E UPLC1; arfgap, structur 99.9 3.3E-23 1.1E-27 198.5 9.6 145 31-184 147-299 (301)
99 3ehr_A Osteoclast-stimulating 99.9 1.7E-23 5.7E-28 191.1 7.1 137 63-202 67-204 (222)
100 3ehr_A Osteoclast-stimulating 99.9 5.1E-23 1.7E-27 187.8 10.0 139 30-172 68-207 (222)
101 3aaa_C Myotrophin, protein V-1 99.9 5.5E-23 1.9E-27 169.7 9.1 118 31-151 3-120 (123)
102 2b0o_E UPLC1; arfgap, structur 99.9 8.8E-23 3E-27 195.5 10.3 129 67-197 149-285 (301)
103 1dcq_A PYK2-associated protein 99.9 1.6E-21 5.5E-26 184.6 14.9 127 70-198 131-265 (278)
104 3jue_A Arfgap with coiled-coil 99.8 4.5E-21 1.5E-25 188.2 11.3 128 66-196 196-326 (368)
105 3lvq_E ARF-GAP with SH3 domain 99.8 1.2E-20 4.1E-25 193.2 13.4 126 71-198 134-267 (497)
106 1dcq_A PYK2-associated protein 99.8 2.1E-20 7.2E-25 176.8 13.2 130 31-163 126-263 (278)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.3E-20 1.1E-24 145.1 11.0 91 103-195 2-92 (93)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.9E-20 1.3E-24 144.7 10.8 90 35-126 2-91 (93)
109 3lvq_E ARF-GAP with SH3 domain 99.8 3.5E-20 1.2E-24 189.7 13.4 139 32-180 129-276 (497)
110 2l6b_A NR1C; ankyrin, consensu 99.8 2.2E-20 7.5E-25 152.0 9.3 108 64-174 4-111 (115)
111 3jue_A Arfgap with coiled-coil 99.8 6.2E-20 2.1E-24 180.1 12.8 146 33-181 197-347 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.8 5.1E-20 1.7E-24 149.8 8.2 108 30-140 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 1.2E-17 4.1E-22 134.8 8.8 93 28-122 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 3.3E-17 1.1E-21 132.3 8.7 89 65-155 20-108 (110)
115 2l2t_A Receptor tyrosine-prote 64.0 4.6 0.00016 25.6 2.4 29 366-394 6-34 (44)
116 2knc_B Integrin beta-3; transm 53.9 10 0.00034 27.4 3.1 30 368-397 9-38 (79)
117 2ks1_B Epidermal growth factor 52.0 4.6 0.00016 25.6 0.8 28 367-394 8-35 (44)
118 2jwa_A Receptor tyrosine-prote 30.6 34 0.0012 21.5 2.4 27 367-394 9-35 (44)
119 4ev6_A Magnesium transport pro 24.2 75 0.0026 29.5 4.7 24 339-362 278-301 (339)
120 3rko_J NADH-quinone oxidoreduc 24.2 88 0.003 26.4 4.6 15 303-317 4-18 (184)
121 2k1k_A Ephrin type-A receptor 24.0 44 0.0015 20.3 1.9 23 371-393 12-34 (38)
122 1gp8_A Protein (scaffolding pr 23.2 54 0.0019 19.8 2.2 18 38-55 16-33 (40)
123 2iub_A CORA, divalent cation t 23.2 76 0.0026 29.9 4.6 24 339-362 302-325 (363)
124 2l8s_A Integrin alpha-1; trans 22.9 89 0.003 20.6 3.4 22 367-388 7-28 (54)
125 3mkq_B Coatomer subunit alpha; 22.3 3.4E+02 0.012 22.6 8.5 131 4-163 12-144 (177)
126 2knc_A Integrin alpha-IIB; tra 21.6 99 0.0034 20.4 3.4 22 367-388 10-31 (54)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=9e-37 Score=288.52 Aligned_cols=207 Identities=26% Similarity=0.297 Sum_probs=182.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCc--ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPN--LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAAR 78 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~--~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~ 78 (437)
+||||.|+..|+ .+++++|++.+++ ..+..|..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+.
T Consensus 10 ~t~L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 10 DTALHLAVIHQH-EPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACR 87 (282)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTT
T ss_pred CcHHHHHHHcCC-HHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 589999999999 9999999998665 46788999999999999999999999999999987 6789999999999999
Q ss_pred cCCHHHHHHHHhCCCCC----------------------------------------------CcccCCCCCcHHHHHHh
Q 013760 79 MGHLEVVKALVSKDPST----------------------------------------------GFRTDKKGQTALHMAVK 112 (437)
Q Consensus 79 ~g~~~iv~~Ll~~~~~~----------------------------------------------~~~~d~~g~t~Lh~A~~ 112 (437)
.|+.+++++|++.+++. ....|..|.||||+|+.
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 167 (282)
T 1oy3_D 88 VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVI 167 (282)
T ss_dssp TTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHH
T ss_pred cCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHH
Confidence 99999999999987652 12347889999999999
Q ss_pred CCCHHHHHHhhcCCCCccccCCC-CCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHH
Q 013760 113 GQNEDIVLELIRPDPSVLKLEDN-KGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLK 191 (437)
Q Consensus 113 ~g~~~iv~~Ll~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~ 191 (437)
.|+.+++++|++.+.++ +.++. .|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+
T Consensus 168 ~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 168 HKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp TTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCcccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 99999999999999887 66664 59999999999999999999999 79999999999999999999999999999999
Q ss_pred HcCCCcccCCCCCCChHHHH
Q 013760 192 EAGAAHSKDHGKPPSATKQL 211 (437)
Q Consensus 192 ~~ga~~~~~~~~~~~~~~~~ 211 (437)
++|++....+..+.++....
T Consensus 246 ~~ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 246 AHGAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp HTTCCCCCCC----------
T ss_pred HcCCCcCcCCCccccccccc
Confidence 99999998888887776544
No 2
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=5.2e-36 Score=274.69 Aligned_cols=207 Identities=28% Similarity=0.327 Sum_probs=191.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcC--CchhHhhhcCCCcHHHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEID--SNLAKIARNNGKTVLHSAAR 78 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~G~tpLh~Aa~ 78 (437)
.||||.|+..|+ .++++.|++.+++.....|.+|.||||+|+..|+.+++++|++.+ .+.....|..|.||||+|+.
T Consensus 3 ~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 3 NYPLHQACMENE-FFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred ccHHHHHHHhCC-HHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 489999999999 999999999999888789999999999999999999999999999 66544478899999999999
Q ss_pred cCCHHHHHHHHhCC--CCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHh
Q 013760 79 MGHLEVVKALVSKD--PSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 156 (437)
Q Consensus 79 ~g~~~iv~~Ll~~~--~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 156 (437)
.|+.+++++|++.+ ++... .|..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNK-ITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCccccc-CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999998 66554 4889999999999999999999999998876 88999999999999999999999999
Q ss_pred hcccC-CCccccccCCCCHHHHHHHcCcHHHHHHHH-HcCCCcccCCCCCCChHHHH
Q 013760 157 LSIEG-IDVNSLNKAGESPLDVAEKLGNTELFSLLK-EAGAAHSKDHGKPPSATKQL 211 (437)
Q Consensus 157 l~~~g-~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~-~~ga~~~~~~~~~~~~~~~~ 211 (437)
++ .| ++++.+|..|.||||+|+..++.+++++|+ +.|++....+..+.++....
T Consensus 160 l~-~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 160 CG-LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp HT-TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGC
T ss_pred Hh-cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHH
Confidence 99 56 999999999999999999999999999999 99999988888887766543
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.1e-36 Score=284.58 Aligned_cols=208 Identities=24% Similarity=0.242 Sum_probs=168.8
Q ss_pred CchhhHHHHcC-------------CcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhc
Q 013760 1 MDMIHFMWQQS-------------RVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARN 67 (437)
Q Consensus 1 ~t~Lh~A~~~g-------------~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 67 (437)
+||||.|+..| + .++++.|++.+++.....|.+|.||||+|+..|+.+++++|++.|+++ +..|.
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~-~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~ 88 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDA-PAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDN 88 (253)
T ss_dssp ------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred CcHHHHHHhccccccccchhhcCCC-hHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC
Confidence 58999999987 8 999999999999987778999999999999999999999999999987 67899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHc
Q 013760 68 NGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKK 147 (437)
Q Consensus 68 ~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~ 147 (437)
+|.||||+|+..|+.+++++|++.++......|..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..
T Consensus 89 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 89 MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAV 167 (253)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCTTSCBHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 99999999999999999999999998444556999999999999999999999999998876 88999999999999999
Q ss_pred CcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 148 GRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 148 g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++....+..+.++.....
T Consensus 168 ~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 168 NNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ 231 (253)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHH
Confidence 99999999999 89999999999999999999999999999999999999988888888776554
No 4
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.2e-35 Score=273.00 Aligned_cols=206 Identities=28% Similarity=0.333 Sum_probs=194.6
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.|+..|+ ++.++++++.++...+..|.+|.||||+|+..|+.+++++|++.|.++ +..|..|.||||+|+..|+
T Consensus 8 ~~l~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 8 IMICNLAYSGK-LDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SHHHHHHHHTC-HHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTC
T ss_pred chHHHHHHhCC-HHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCH
Confidence 79999999999 999999999999888889999999999999999999999999999887 6788999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccC
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEG 161 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 161 (437)
.+++++|++.+++.... |..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||.|+..|+.+++++|++ .|
T Consensus 86 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g 162 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAV-NQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHILLF-YK 162 (231)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TT
T ss_pred HHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh-cC
Confidence 99999999999998754 899999999999999999999999998876 8899999999999999999999999999 89
Q ss_pred CCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 162 IDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 162 ~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
++++.+|..|.||||+|+..++.+++++|+++|++....+..+.++.....
T Consensus 163 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 163 ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK 213 (231)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSC
T ss_pred CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999888888888776553
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=279.15 Aligned_cols=204 Identities=22% Similarity=0.261 Sum_probs=190.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|.+|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|
T Consensus 4 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 4 WSPMHEAAIHGH-QLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSG 80 (261)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred CCHHHHHHHcCC-HHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcC
Confidence 699999999999 9999999999776 5678999999999999999999999999999987 678999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.+++... +.+|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 81 ~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ 156 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLE-S 156 (261)
T ss_dssp CHHHHHHHHHTTCCSSC--SCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH-H
T ss_pred CHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHH-c
Confidence 99999999999998763 567999999999999999999999999876 8899999999999999999999999999 8
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
|+++|. |..|.||||+|+..++.+++++|+++|++.+..+..+.++.....
T Consensus 157 g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 157 GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP 207 (261)
T ss_dssp TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcc
Confidence 999996 899999999999999999999999999999988888887765543
No 6
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.3e-35 Score=269.73 Aligned_cols=207 Identities=24% Similarity=0.305 Sum_probs=191.7
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
.||||.|+..|+ .+++++|++.+.+ .+..|.+|.||||+|+..|+.+++++|++.|.++ +..+..|.||||+|+..|
T Consensus 12 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 12 RSPLHAAAEAGH-VDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCc-HHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcC
Confidence 489999999999 9999999999876 4578899999999999999999999999999887 668889999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.++......|..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 89 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~ 166 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDIAEILLA-A 166 (237)
T ss_dssp CHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHHHHHT-T
T ss_pred CHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHHHHHHHH-c
Confidence 9999999999995544556899999999999999999999999998876 8899999999999999999999999999 8
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
|++++..|..|.||||+|+..++.+++++|+++|++....+..+.++.....
T Consensus 167 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 218 (237)
T 3b7b_A 167 KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCAS 218 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999888888888776543
No 7
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.3e-35 Score=265.24 Aligned_cols=191 Identities=20% Similarity=0.259 Sum_probs=177.5
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
.||||.|+..|+ .+.++.|++.++...+..|.+|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|
T Consensus 6 ~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 6 VGALLEAANQRD-TKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp TTHHHHHHHTTC-HHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred ccHHHHHHHhcc-HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 489999999999 999999999998667889999999999999999999999999999987 678899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCc-----HHHHHH
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGR-----TQIVRC 155 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~-----~~iv~~ 155 (437)
+.+++++|++.+.......|..|.||||+|+..|+.+++++|++.++..++.+|.+|+||||+|+..++ .+++++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~ 163 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL 163 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence 999999999555433445689999999999999999999999999955569999999999999999988 999999
Q ss_pred hhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcC
Q 013760 156 LLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAG 194 (437)
Q Consensus 156 Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~g 194 (437)
|++ .|++++.+|..|.||||+|+..++.+++++|+++|
T Consensus 164 Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 164 LME-NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHH-CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999 89999999999999999999999999999999876
No 8
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.1e-35 Score=270.19 Aligned_cols=205 Identities=22% Similarity=0.236 Sum_probs=187.1
Q ss_pred CchhhHHHHcCCcHHHHHHHHhh---CCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGE---FPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAA 77 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~---~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa 77 (437)
+||||.|+..|+ .+++++|++. .+...+..|..|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+
T Consensus 10 ~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 10 DTPLHIAVVQGN-LPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLAC 87 (241)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CcHHHHHHHcCC-HHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHH
Confidence 589999999999 9999999983 44456778999999999999999999999999999987 678899999999999
Q ss_pred HcCCHHHHHHHHhCCC----CCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCC-CCCChHHHHHHHcCcHHH
Q 013760 78 RMGHLEVVKALVSKDP----STGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLED-NKGNTALHIAIKKGRTQI 152 (437)
Q Consensus 78 ~~g~~~iv~~Ll~~~~----~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~G~TpLh~A~~~g~~~i 152 (437)
..|+.+++++|++.++ +.. ..|..|.||||+|+..|+.+++++|++.+.++ +..| .+|+||||+|+..|+.++
T Consensus 88 ~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 88 EHRSPTCLRALLDSAAPGTLDLE-ARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHcCCCcccccc-ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHH
Confidence 9999999999999987 444 45889999999999999999999999999887 6666 889999999999999999
Q ss_pred HHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHH
Q 013760 153 VRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQ 210 (437)
Q Consensus 153 v~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~ 210 (437)
+++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++....+..+.++...
T Consensus 166 v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 222 (241)
T 1k1a_A 166 VQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMV 222 (241)
T ss_dssp HHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTT
T ss_pred HHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHH
Confidence 999999 799999999999999999999999999999999999998877777666543
No 9
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6.4e-35 Score=266.64 Aligned_cols=194 Identities=22% Similarity=0.280 Sum_probs=180.1
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|++.++...+..+.+|.||||+|+..|
T Consensus 26 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 26 ETALHLAARYSR-SDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 103 (223)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CchHHHHHHcCC-HHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhC
Confidence 589999999999 9999999999776 45688999999999999999999999999988555778899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 104 ~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ 180 (223)
T 2f8y_A 104 VEGMLEDLINSHADVNAV-DDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLD-H 180 (223)
T ss_dssp CHHHHHHHHHTTCCTTCB-CTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH-T
T ss_pred cHHHHHHHHHcCCCCcCc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCcCHHHHHHHcCCHHHHHHHHH-c
Confidence 999999999999988754 899999999999999999999999998776 8899999999999999999999999999 8
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCccc
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSK 199 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~ 199 (437)
|++++.+|..|.||+++|+..++.+++++|+++|+....
T Consensus 181 ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 181 FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 999999999999999999999999999999999997643
No 10
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.1e-35 Score=271.73 Aligned_cols=196 Identities=26% Similarity=0.271 Sum_probs=177.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchh----HhhhcCCCcHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLA----KIARNNGKTVLHSA 76 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~----~~~~~~G~tpLh~A 76 (437)
.||||.|+..|+ .++++.|++..+...+.+|.+|.||||+|+..|+.+++++|++.+++.. +..|.+|.||||+|
T Consensus 4 ~t~L~~A~~~g~-~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 4 ESPLLLAAKEND-VQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TCHHHHHHHTTC-HHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCHHHHHHHcCC-HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 489999999999 9999999998555577889999999999999999999999999998763 34567899999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCccc------------CCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHH
Q 013760 77 ARMGHLEVVKALVSKDPSTGFRT------------DKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIA 144 (437)
Q Consensus 77 a~~g~~~iv~~Ll~~~~~~~~~~------------d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A 144 (437)
+..|+.+++++|++.+++..... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVLHIL 161 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHH
Confidence 99999999999999999887542 237999999999999999999999998876 89999999999999
Q ss_pred HHcCcHHHH----HHhhcccCCCc------cccccCCCCHHHHHHHcCcHHHHHHHHHcCCCccc
Q 013760 145 IKKGRTQIV----RCLLSIEGIDV------NSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSK 199 (437)
Q Consensus 145 ~~~g~~~iv----~~Ll~~~g~~~------n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~ 199 (437)
+..|+.+++ ++|++ .|++. +.+|..|.||||+|+..|+.+++++|+++|+....
T Consensus 162 ~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLS-YDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp HTCSCHHHHHHHHHHHHH-TTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred HHcCChHHHHHHHHHHHh-cCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchh
Confidence 999999988 99998 78887 68999999999999999999999999999876543
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=275.21 Aligned_cols=204 Identities=22% Similarity=0.258 Sum_probs=189.4
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .++++.|++.+.+ ++.+|.+|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|
T Consensus 60 ~t~L~~Aa~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 60 WSPMHEAAIHGH-QLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSG 136 (285)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHT
T ss_pred CCHHHHHHHcCC-HHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcC
Confidence 589999999999 9999999999876 4578999999999999999999999999999887 678999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.+++... +.+|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 137 ~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ 212 (285)
T 3d9h_A 137 SWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLE-S 212 (285)
T ss_dssp CHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH-T
T ss_pred HHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH-C
Confidence 99999999999998763 556999999999999999999999998876 8899999999999999999999999999 7
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
|++++. |..|.||||+|+..++.+++++|+++|++....+..+.++.....
T Consensus 213 ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 213 GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc
Confidence 999995 899999999999999999999999999999988888887765543
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.5e-34 Score=278.15 Aligned_cols=206 Identities=24% Similarity=0.288 Sum_probs=160.9
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ ++..|.+|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|
T Consensus 59 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 135 (351)
T 3utm_A 59 STPLHLAAGYNR-VRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKN 135 (351)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHcCC-HHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcC
Confidence 367777777777 7777777777655 3456777777777777777777777777777776 556777777788777777
Q ss_pred CHHHHHHHHhCCCCCCcc-----------------------------------------------------cCCCCCcHH
Q 013760 81 HLEVVKALVSKDPSTGFR-----------------------------------------------------TDKKGQTAL 107 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~-----------------------------------------------------~d~~g~t~L 107 (437)
+.+++++|++.++++... .+..|.|||
T Consensus 136 ~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L 215 (351)
T 3utm_A 136 RVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETAL 215 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHH
T ss_pred CHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHH
Confidence 777777777776664421 234567777
Q ss_pred HHHHhC---CCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcH
Q 013760 108 HMAVKG---QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNT 184 (437)
Q Consensus 108 h~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~ 184 (437)
|+|+.. ++.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|+++|.+|..|+||||+|+..++.
T Consensus 216 ~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~n~~d~~g~t~L~~A~~~~~~ 293 (351)
T 3utm_A 216 HCAVASLHPKRKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAHNDVMEVLHK-HGAKMNALDSLGQTALHRAALAGHL 293 (351)
T ss_dssp HHHHHCCSTTHHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHhCccHHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 777777 4467777777777665 7788889999999999999999999998 7899999999999999999999999
Q ss_pred HHHHHHHHcCCCcccCCCCCCChHHHH
Q 013760 185 ELFSLLKEAGAAHSKDHGKPPSATKQL 211 (437)
Q Consensus 185 ~i~~~L~~~ga~~~~~~~~~~~~~~~~ 211 (437)
+++++|+++|+++...+..+.++....
T Consensus 294 ~~v~~Ll~~gad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 294 QTCRLLLSYGSDPSIISLQGFTAAQMG 320 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHS
T ss_pred HHHHHHHHcCCCCCCcCCCCCChhhhh
Confidence 999999999998888887777766544
No 13
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-35 Score=279.54 Aligned_cols=205 Identities=25% Similarity=0.319 Sum_probs=185.7
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.||..|+ .++++.|++.+.+ ++..|.+|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|+
T Consensus 42 t~l~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 42 AVFLAACSSGD-TEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred cHHHHHHHcCC-HHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCC
Confidence 68999999999 9999999999877 4578999999999999999999999999999987 6789999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCC--------------------------ccccCCC
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPS--------------------------VLKLEDN 135 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~--------------------------~~~~~d~ 135 (437)
.+++++|++.++++... |..|.||||+|+..++.++++.++..... .....|.
T Consensus 119 ~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAV-NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred HHHHHHHHhCCCCCCCc-CCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 99999999999998754 89999999999999999999877754221 2234677
Q ss_pred CCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHH
Q 013760 136 KGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQL 211 (437)
Q Consensus 136 ~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~ 211 (437)
.|.||||+|+..|+.+++++|++ .|+++|.+|..|.||||+|+..|+.+++++|+++|++.+..+..+.++....
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 89999999999999999999999 8999999999999999999999999999999999999988888887776544
No 14
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.1e-35 Score=274.52 Aligned_cols=194 Identities=23% Similarity=0.266 Sum_probs=177.7
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCc---ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPN---LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAA 77 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~---~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa 77 (437)
+||||.|+..|+ .++++.|++.++. .++..|..|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+
T Consensus 9 ~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 9 DSFLHLAIIHEE-KALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLAC 86 (236)
T ss_dssp CCTTHHHHHTTC-SSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHH
T ss_pred CchhHHHHHcCC-hhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 589999999999 9999999998764 46788999999999999999999999999999987 678899999999999
Q ss_pred HcCCHHHHHHHHhCCCCC-----CcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCC-CCChHHHHHHHcCcHH
Q 013760 78 RMGHLEVVKALVSKDPST-----GFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDN-KGNTALHIAIKKGRTQ 151 (437)
Q Consensus 78 ~~g~~~iv~~Ll~~~~~~-----~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~-~G~TpLh~A~~~g~~~ 151 (437)
..|+.+++++|++.+++. ....|..|.||||+|+..|+.+++++|++.+.++ +.+|. +|+||||+|+..|+.+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999998753 2345888999999999999999999999999887 77887 9999999999999999
Q ss_pred HHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Q 013760 152 IVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 198 (437)
Q Consensus 152 iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~ 198 (437)
++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++..
T Consensus 166 ~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 166 LVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHHHH-cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999999 899999999999999999999999999999999999765
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-34 Score=266.06 Aligned_cols=190 Identities=26% Similarity=0.298 Sum_probs=179.1
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|
T Consensus 41 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 41 RTALHWACSAGH-TEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKN 117 (231)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCc-HHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 589999999999 9999999999776 4578899999999999999999999999999987 678899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.+.++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 118 ~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ 194 (231)
T 3aji_A 118 RHEIAVMLLEGGANPDAK-DHYDATAMHRAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEERVEEAKFLVT-Q 194 (231)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH-T
T ss_pred CHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCCCCCCHHHHHHHCCCHHHHHHHHH-C
Confidence 999999999999988754 889999999999999999999999998876 8899999999999999999999999999 8
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 196 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~ 196 (437)
|++++.+|..|.||+|+|...++.+++++|.++|++
T Consensus 195 ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 195 GASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 999999999999999999999999999999998865
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-34 Score=268.84 Aligned_cols=190 Identities=22% Similarity=0.273 Sum_probs=176.7
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .++++.|++.+.+ .+..|..|.||||+|+..|+.+++++|++.++...+..+.+|.||||+|+..|
T Consensus 58 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 135 (253)
T 1yyh_A 58 ETALHLAARYSR-SDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135 (253)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CcHHHHHHHcCC-HHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Confidence 589999999999 9999999999876 45788999999999999999999999999988555778999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 136 ~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ 212 (253)
T 1yyh_A 136 VEGMLEDLINSHADVNAV-DDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLD-H 212 (253)
T ss_dssp CSSHHHHHHHTTCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-T
T ss_pred hHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHH-c
Confidence 999999999999998754 899999999999999999999999999886 8899999999999999999999999999 8
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 195 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga 195 (437)
|++++.+|..|.||+|+|++.|+.+++++|.....
T Consensus 213 ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 213 FANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred CCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999986543
No 17
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8e-35 Score=274.93 Aligned_cols=205 Identities=20% Similarity=0.229 Sum_probs=163.0
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcc-------cccCCCCCCcHHHHHHHcCCH-HHHHHHHhcCCchhHhhhcCCCcHH
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNL-------VMTTDLSCSTALHTAAAQGHI-DVVNFLLEIDSNLAKIARNNGKTVL 73 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~-------~~~~d~~g~TpLh~Aa~~g~~-~iv~~Ll~~~~~~~~~~~~~G~tpL 73 (437)
|||+.||..|+ +++|+.|++.+.+. .+..|..|.||||.|+..++. .+++.|++.|+++ +.+|.+|+|||
T Consensus 13 ~~L~~A~~~G~-~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpL 90 (269)
T 4b93_B 13 EKLLRAVADGD-LEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHTTC-HHHHHHHHTCC----------------------------------------CCCCT-TCCCTTSCCHH
T ss_pred hHHHHHHHcCC-HHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHH
Confidence 69999999999 99999999987542 345678899999999998876 4889999999997 78899999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHH
Q 013760 74 HSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIV 153 (437)
Q Consensus 74 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv 153 (437)
|+|+..|+.+++++|++.+++.... +.+|.||+|.|+..++.++++.|++.+.++ +.+|.+|+||||+|+..|+.+++
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a~~~~~-~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~v 168 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGANAGAR-NADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHELV 168 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGGH
T ss_pred HHHHHcCcHHHHHHHHhcCCCcCcc-CCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHHH
Confidence 9999999999999999999998754 899999999999999999999999999886 89999999999999999999999
Q ss_pred HHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHH
Q 013760 154 RCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQL 211 (437)
Q Consensus 154 ~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~ 211 (437)
++|++ .|+|+|.+|..|.||||+|+..|+.+++++|+++|++++..+..+.++....
T Consensus 169 ~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 169 ALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp HHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred HHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 99999 8999999999999999999999999999999999999988888887776543
No 18
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-32 Score=260.27 Aligned_cols=207 Identities=24% Similarity=0.247 Sum_probs=181.9
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.|++.|+ ++++++|++.+++.....+..|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|+
T Consensus 7 ~~L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 7 HLLIKAVQNED-VDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHcCC-HHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCC
Confidence 78999999999 999999999988766555888999999999999999999999998887 6678899999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccC----------CCCCChHHHHHHHcCcHH
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLE----------DNKGNTALHIAIKKGRTQ 151 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~----------d~~G~TpLh~A~~~g~~~ 151 (437)
.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.. |..|.||||.|+..|+.+
T Consensus 85 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 85 VKLLKLFLSKGADVNEC-DFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp HHHHHHHHHTTCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred HHHHHHHHHcCCCCCcc-CcccCCHHHHHHHhCCHHHHHHHHHhCCCc-ccccccHHHHHhhccCCCcHHHHHHHcCCHH
Confidence 99999999999887754 888999999999999999999999988765 444 778999999999999999
Q ss_pred HHHHhhcccCCCccccccCCCCHHHHHHHcCc----HHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 152 IVRCLLSIEGIDVNSLNKAGESPLDVAEKLGN----TELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 152 iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~----~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
++++|++..|++++..|..|.||||.|+..++ .+++++|+++|++.+..+..+.++.....
T Consensus 163 ~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~ 227 (285)
T 1wdy_A 163 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV 227 (285)
T ss_dssp HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHH
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 99999985699999999999999999999988 88999999999998887777777765543
No 19
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.8e-33 Score=271.50 Aligned_cols=196 Identities=24% Similarity=0.322 Sum_probs=154.1
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch--------------------
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNL-------------------- 61 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~-------------------- 61 (437)
||||.|+++|+ +|+|+.||+.+.+.....+..|.||||+|+..|+.++|++|+++|+++
T Consensus 27 t~L~~Av~~g~-~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 105 (337)
T 4g8k_A 27 HLLIKAVQNED-VDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSV 105 (337)
T ss_dssp HHHHHHHHTTC-HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred hHHHHHHHcCC-HHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccc
Confidence 68999999999 999999999988754444556999999999999999999999988754
Q ss_pred ------------hHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc---------cCCCCCcHHHHHHhCCCHHHHH
Q 013760 62 ------------AKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFR---------TDKKGQTALHMAVKGQNEDIVL 120 (437)
Q Consensus 62 ------------~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~---------~d~~g~t~Lh~A~~~g~~~iv~ 120 (437)
.+..|..|.||||+|+..|+.+++++|++.++++... .+..|.||||+|+++|+.++++
T Consensus 106 ~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~ 185 (337)
T 4g8k_A 106 KLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLK 185 (337)
T ss_dssp HHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHH
T ss_pred hhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHH
Confidence 1235677899999999999999999999988776532 3567889999999999998888
Q ss_pred HhhcC-CCCc------------------------------------cccCCCCCChHHHHHHHcCcHHHHHHhhcccCCC
Q 013760 121 ELIRP-DPSV------------------------------------LKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID 163 (437)
Q Consensus 121 ~Ll~~-~~~~------------------------------------~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~ 163 (437)
+|+++ +.++ ++.+|.+|+||||+|+..|+.++++.|++..|++
T Consensus 186 ~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~ 265 (337)
T 4g8k_A 186 ILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 265 (337)
T ss_dssp HHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC
T ss_pred HHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc
Confidence 88743 2221 2455666777777777777777777777656777
Q ss_pred ccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Q 013760 164 VNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 198 (437)
Q Consensus 164 ~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~ 198 (437)
+|.+|.+|.||||+|++.|+.+++++|+++|++.+
T Consensus 266 vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 266 INDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 77777777777777777777777777777777654
No 20
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-32 Score=259.62 Aligned_cols=208 Identities=23% Similarity=0.233 Sum_probs=190.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|.+|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|
T Consensus 40 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 116 (285)
T 1wdy_A 40 WTPLHNAVQMSR-EDIVELLLRHGAD-PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYG 116 (285)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTT
T ss_pred CcHHHHHHHcCC-HHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhC
Confidence 589999999999 9999999999876 4568899999999999999999999999999987 678899999999999999
Q ss_pred CHHHHHHHHhCCCCCCccc---------CCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCc--
Q 013760 81 HLEVVKALVSKDPSTGFRT---------DKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGR-- 149 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~---------d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~-- 149 (437)
+.+++++|++.+++..... +..|.||||.|+..|+.+++++|++..+..++.+|..|+||||.|+..++
T Consensus 117 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 196 (285)
T 1wdy_A 117 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT
T ss_pred CHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccc
Confidence 9999999999998876542 67899999999999999999999998444458999999999999999999
Q ss_pred --HHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHH-cCCCcccCCCCCCChHHHHH
Q 013760 150 --TQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKE-AGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 150 --~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~-~ga~~~~~~~~~~~~~~~~~ 212 (437)
.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++ .|++.+..+..+.++.....
T Consensus 197 ~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~ 261 (285)
T 1wdy_A 197 DVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261 (285)
T ss_dssp THHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHH
Confidence 999999999 899999999999999999999999999999999 89998888888877766543
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.6e-33 Score=277.16 Aligned_cols=205 Identities=20% Similarity=0.187 Sum_probs=185.1
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|..|.||||+|+..|+.++|++|++.|++. .+.+|.||||+|+..|
T Consensus 21 ~t~L~~Aa~~g~-~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 21 MEKIHVAARKGQ-TDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHTC-HHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHHTT
T ss_pred CCHHHHHHHcCC-HHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHHcC
Confidence 489999999999 9999999999876 4678999999999999999999999999999854 3458999999999999
Q ss_pred CHHHHHHHHhC----CCCCCc----------------ccCCCCCcHHHHHHhCC--CHHHHHHhhcCCCCccccCCCCCC
Q 013760 81 HLEVVKALVSK----DPSTGF----------------RTDKKGQTALHMAVKGQ--NEDIVLELIRPDPSVLKLEDNKGN 138 (437)
Q Consensus 81 ~~~iv~~Ll~~----~~~~~~----------------~~d~~g~t~Lh~A~~~g--~~~iv~~Ll~~~~~~~~~~d~~G~ 138 (437)
+.+++++|++. +.+... ..|..|.||||+|+..| +.+++++|++.+.++ +.+|.+|+
T Consensus 96 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~ 174 (364)
T 3ljn_A 96 KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADE 174 (364)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSC
T ss_pred CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCC
Confidence 99999999998 655443 14778999999999999 999999999998776 88999999
Q ss_pred hHHHHHHHcCcHHHHHHhhcccCCC-----ccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 139 TALHIAIKKGRTQIVRCLLSIEGID-----VNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 139 TpLh~A~~~g~~~iv~~Ll~~~g~~-----~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
||||+|+..|+.+++++|++ .|++ +|..|..|.||||+|+..|+.+++++|+++|++.+..+..+.++.....
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMD-TVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-HCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHh-cccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999 7777 9999999999999999999999999999999999888888877765543
No 22
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=6e-34 Score=266.24 Aligned_cols=192 Identities=25% Similarity=0.284 Sum_probs=170.4
Q ss_pred chhhHHHHcCCcHH----HHHHHHhhCCcccc---cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCchhHh-------
Q 013760 2 DMIHFMWQQSRVIL----VLKELLGEFPNLVM---TTDLSCSTALHTAAAQ---GHIDVVNFLLEIDSNLAKI------- 64 (437)
Q Consensus 2 t~Lh~A~~~g~~~~----~vk~Ll~~~~~~~~---~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~------- 64 (437)
||||.|+..|+ .+ ++++|++.+.++.. ..|.+|.||||+|+.. |+.+++++|++.|++....
T Consensus 4 t~L~~A~~~g~-~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 82 (256)
T 2etb_A 4 DRLFSVVSRGV-PEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQ 82 (256)
T ss_dssp HHHHHHHHHTC-GGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCC
T ss_pred cHHHHHHHcCC-HHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccc
Confidence 79999999999 87 55666667766432 3799999999999999 9999999999998765311
Q ss_pred ---hhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCC-------------CCcHHHHHHhCCCHHHHHHhhc---C
Q 013760 65 ---ARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKK-------------GQTALHMAVKGQNEDIVLELIR---P 125 (437)
Q Consensus 65 ---~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~-------------g~t~Lh~A~~~g~~~iv~~Ll~---~ 125 (437)
.|.+|.||||+|+..|+.+++++|++.+++++.. |.. |.||||+|+..|+.+++++|++ .
T Consensus 83 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 83 CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR-ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred cccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 2467999999999999999999999999998765 554 9999999999999999999999 7
Q ss_pred CCCccccCCCCCChHHHHHHH--cCcHH-------HHHHhhcccCCCc-------cccccCCCCHHHHHHHcCcHHHHHH
Q 013760 126 DPSVLKLEDNKGNTALHIAIK--KGRTQ-------IVRCLLSIEGIDV-------NSLNKAGESPLDVAEKLGNTELFSL 189 (437)
Q Consensus 126 ~~~~~~~~d~~G~TpLh~A~~--~g~~~-------iv~~Ll~~~g~~~-------n~~n~~G~T~L~~A~~~~~~~i~~~ 189 (437)
+.++ +.+|.+|+||||+|+. .++.+ ++++|++ .|+++ +.+|..|.||||+|+..|+.+++++
T Consensus 162 ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 239 (256)
T 2etb_A 162 PASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ-MGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH 239 (256)
T ss_dssp CCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH-cCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence 7776 8999999999999999 88888 9999999 89999 9999999999999999999999999
Q ss_pred HHHcCCCc
Q 013760 190 LKEAGAAH 197 (437)
Q Consensus 190 L~~~ga~~ 197 (437)
|+++|++.
T Consensus 240 Ll~~g~~~ 247 (256)
T 2etb_A 240 ILQREFSG 247 (256)
T ss_dssp HHHHHHHH
T ss_pred HHhCCCCC
Confidence 99998754
No 23
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.7e-33 Score=257.21 Aligned_cols=198 Identities=25% Similarity=0.258 Sum_probs=180.7
Q ss_pred cCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHH
Q 013760 10 QSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALV 89 (437)
Q Consensus 10 ~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll 89 (437)
.|+ .+++++|++.+++.....|.+|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|+.+++++|+
T Consensus 1 gg~-~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 1 GDA-PAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp -----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCc-HHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 367 889999999999887778999999999999999999999999999887 678899999999999999999999999
Q ss_pred hCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCcccccc
Q 013760 90 SKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNK 169 (437)
Q Consensus 90 ~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~ 169 (437)
+.++......|..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|.
T Consensus 79 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~ 156 (223)
T 2f8y_A 79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNN 156 (223)
T ss_dssp HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCT
T ss_pred HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCC
Confidence 9998555566899999999999999999999999998876 8899999999999999999999999999 7999999999
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHH
Q 013760 170 AGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQL 211 (437)
Q Consensus 170 ~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~ 211 (437)
.|.||||+|+..++.+++++|+++|++....+..+.++....
T Consensus 157 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 198 (223)
T 2f8y_A 157 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIA 198 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHH
Confidence 999999999999999999999999999988877777776544
No 24
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.3e-34 Score=271.51 Aligned_cols=191 Identities=22% Similarity=0.181 Sum_probs=176.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .++++.|++.+.+.. .. +|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|
T Consensus 32 ~t~L~~A~~~g~-~~~v~~Ll~~g~~~~-~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g 106 (285)
T 3kea_A 32 HSASYYAIADNN-VRLVCTLLNAGALKN-LL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSG 106 (285)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTGGGS-CC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCC-HHHHHHHHhCCCCCC-CC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcC
Confidence 589999999999 999999999987643 33 5999999999999999999999999997 678999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCC-CcHHHHHHhCCCHHHHHHhhcCCCCccccCCC-CCChHHHHHHHcCcHHHHHHhhc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKG-QTALHMAVKGQNEDIVLELIRPDPSVLKLEDN-KGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g-~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
+.+++++|++.++++... |..| .||||+|+..|+.+++++|++.+++. .|. +|+||||+|+..|+.+++++|++
T Consensus 107 ~~~~v~~Ll~~ga~~~~~-~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 182 (285)
T 3kea_A 107 NMQTVKLFVKKNWRLMFY-GKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLD 182 (285)
T ss_dssp CHHHHHHHHHHCGGGGGC-SSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCcc-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHHHHcChHHHHHHHHH
Confidence 999999999999998754 8888 89999999999999999999998766 233 89999999999999999999999
Q ss_pred ccCCCccccccCCCCH-HHHHHHcCcHHHHHHHHHcCCCcccCC
Q 013760 159 IEGIDVNSLNKAGESP-LDVAEKLGNTELFSLLKEAGAAHSKDH 201 (437)
Q Consensus 159 ~~g~~~n~~n~~G~T~-L~~A~~~~~~~i~~~L~~~ga~~~~~~ 201 (437)
.|+++|.+|..|.|| ||+|+..++.+++++|+++|++.+..+
T Consensus 183 -~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 183 -YMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp -HHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred -cCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 799999999999998 999999999999999999999987654
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1e-33 Score=261.40 Aligned_cols=190 Identities=24% Similarity=0.256 Sum_probs=172.4
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCC----chhHhhhcCCCcHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDS----NLAKIARNNGKTVLHSA 76 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~----~~~~~~~~~G~tpLh~A 76 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|++.++ +. +..|.+|.||||+|
T Consensus 47 ~t~L~~A~~~~~-~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A 123 (241)
T 1k1a_A 47 QTPLHLAVITTL-PSVVRLLVTAGAS-PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVA 123 (241)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCC-HHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHH
Confidence 589999999999 9999999998876 45678999999999999999999999999987 44 66788999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHh
Q 013760 77 ARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 156 (437)
Q Consensus 77 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 156 (437)
+..|+.+++++|++.+++.....+..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|
T Consensus 124 ~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 202 (241)
T 1k1a_A 124 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLLPLVRTL 202 (241)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999988663388999999999999999999999998886 88999999999999999999999999
Q ss_pred hcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 013760 157 LSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 195 (437)
Q Consensus 157 l~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga 195 (437)
++ .|++++.+|..|.||||+|+..++.++++.|.+.++
T Consensus 203 l~-~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 203 VR-SGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HH-TTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred Hh-cCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 99 899999999999999999999999999999987664
No 26
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.9e-33 Score=244.64 Aligned_cols=158 Identities=37% Similarity=0.566 Sum_probs=134.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCH
Q 013760 37 TALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNE 116 (437)
Q Consensus 37 TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 116 (437)
++|+.||+.|+.++|+.|++.|+++ +.+|.+|+||||+|+..|+.++++.|++.+.++... |.+|+||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~-d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK-DSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhh-ccCCCCHHHHHHHcCCH
Confidence 4788889999999999999888887 678888899999999999999999999888887654 88889999999999999
Q ss_pred HHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 013760 117 DIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 196 (437)
Q Consensus 117 ~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~ 196 (437)
+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|+|++.+|.+|.||||+|+..|+.+++++|+++||+
T Consensus 84 ~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 84 EVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred HHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 9999999888776 8888899999999999999999999998 7889999999999999999999999999999999887
Q ss_pred cc
Q 013760 197 HS 198 (437)
Q Consensus 197 ~~ 198 (437)
.+
T Consensus 162 ie 163 (169)
T 4gpm_A 162 LE 163 (169)
T ss_dssp --
T ss_pred cC
Confidence 64
No 27
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=5.9e-34 Score=268.99 Aligned_cols=192 Identities=22% Similarity=0.272 Sum_probs=169.4
Q ss_pred CchhhHHHHcCCcHHHHHHHHhh----CCccc---ccCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCchh------Hh
Q 013760 1 MDMIHFMWQQSRVILVLKELLGE----FPNLV---MTTDLSCSTALHTAAAQ---GHIDVVNFLLEIDSNLA------KI 64 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~----~~~~~---~~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~~~------~~ 64 (437)
.||||.|+..|+ .++|+.|++. +.+.. ...|..|.||||+|+.. |+.+++++|++.|++.. +.
T Consensus 14 ~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 14 RRSIFDAVAQSN-CQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp HHHHHHHHHTTC-SSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred chHHHHHHHcCC-HHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 379999999999 9999999984 22221 14588999999999987 99999999999976531 11
Q ss_pred ----hhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCC--------------CCCcHHHHHHhCCCHHHHHHhhc--
Q 013760 65 ----ARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDK--------------KGQTALHMAVKGQNEDIVLELIR-- 124 (437)
Q Consensus 65 ----~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~--------------~g~t~Lh~A~~~g~~~iv~~Ll~-- 124 (437)
.|..|.||||+|+..|+.+++++|++.++++... +. .|.||||+|+..|+.+++++|++
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA-ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc-ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 4568999999999999999999999999998765 44 79999999999999999999999
Q ss_pred -CCCCccccCCCCCChHHHHHHHcCc---------HHHHHHhhcccCCCcc-------ccccCCCCHHHHHHHcCcHHHH
Q 013760 125 -PDPSVLKLEDNKGNTALHIAIKKGR---------TQIVRCLLSIEGIDVN-------SLNKAGESPLDVAEKLGNTELF 187 (437)
Q Consensus 125 -~~~~~~~~~d~~G~TpLh~A~~~g~---------~~iv~~Ll~~~g~~~n-------~~n~~G~T~L~~A~~~~~~~i~ 187 (437)
.+.++ +.+|.+|+||||+|+..|+ .+++++|++ .|+++| .+|..|.||||+|+..|+.+++
T Consensus 172 ~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 172 WQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI-LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp SCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH-hhhhcccccccccccCCCCCCHHHHHHHhChHHHH
Confidence 77765 8999999999999999988 799999999 899986 5999999999999999999999
Q ss_pred HHHHHcCCC
Q 013760 188 SLLKEAGAA 196 (437)
Q Consensus 188 ~~L~~~ga~ 196 (437)
++|+++|++
T Consensus 250 ~~Ll~~ga~ 258 (273)
T 2pnn_A 250 AYILQREIH 258 (273)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHCCCC
Confidence 999999993
No 28
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-32 Score=277.78 Aligned_cols=204 Identities=25% Similarity=0.351 Sum_probs=121.3
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|.+|.||||+|+..|+.+++++|++++.++ +..+.+|.||||+|+..|
T Consensus 147 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 223 (437)
T 1n11_A 147 FTPLHVAAKYGK-VRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQN 223 (437)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHcCC-HHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcC
Confidence 366777777777 7777777766554 2345666666666666666666666666666554 344555666666666666
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.+.+.... +..|.||||+|+..|+.+++++|++.+.+. +..|..|+||||+|+..|+.+++++|++ .
T Consensus 224 ~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~ 300 (437)
T 1n11_A 224 QVEVARSLLQYGGSANAE-SVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIK-H 300 (437)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH-H
T ss_pred CHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHh-C
Confidence 666666666665554432 555666666666666666666666555444 5555555555555555555555555555 4
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHH
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQ 210 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~ 210 (437)
|++++.+|..|.||||+|+..|+.+++++|+++|++.+..+..+.++...
T Consensus 301 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~ 350 (437)
T 1n11_A 301 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQ 350 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 55555555555555555555555555555555555555554444444433
No 29
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.7e-33 Score=273.80 Aligned_cols=190 Identities=23% Similarity=0.240 Sum_probs=176.3
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhc----CCchhHh------------
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEI----DSNLAKI------------ 64 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~----~~~~~~~------------ 64 (437)
+||||+|+..|+ .+++++|++.+.+ ..+.+|.||||+|+..|+.+++++|++. +.+. +.
T Consensus 54 ~t~L~~A~~~g~-~~~v~~Ll~~g~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~ 128 (364)
T 3ljn_A 54 CTALHLACKFGC-VDTAKYLASVGEV---HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNE 128 (364)
T ss_dssp CCHHHHHHHHCC-HHHHHHHHHHCCC---CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEE
T ss_pred CcHHHHHHHcCC-HHHHHHHHHCCCC---ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhh
Confidence 589999999999 9999999999884 2345899999999999999999999998 7766 34
Q ss_pred -----hhcCCCcHHHHHHHcC--CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCc----cccC
Q 013760 65 -----ARNNGKTVLHSAARMG--HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSV----LKLE 133 (437)
Q Consensus 65 -----~~~~G~tpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~----~~~~ 133 (437)
.|.+|.||||+|+..| +.+++++|++.+.+++.. |..|.||||+|+..|+.+++++|++.+++. ++.+
T Consensus 129 ~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 207 (364)
T 3ljn_A 129 IGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK-DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYA 207 (364)
T ss_dssp ETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCC
T ss_pred hccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccc
Confidence 7789999999999999 999999999999998754 899999999999999999999999988762 4889
Q ss_pred CCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCc
Q 013760 134 DNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 197 (437)
Q Consensus 134 d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~ 197 (437)
|.+|+||||+|+..|+.+++++|++ .|+|+|.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 208 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 208 NKQGNSHLHWAILINWEDVAMRFVE-MGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 9999999999999999999999999 89999999999999999999999999999999999875
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=269.21 Aligned_cols=191 Identities=28% Similarity=0.360 Sum_probs=149.8
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..++..++++.|++.+.+ ++..|.+|.||||+|+..|+.++|++|++.++++ +..+.+|.||+|+|+..|
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~ 130 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLG-VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQG 130 (269)
T ss_dssp ----------------------CCCC-TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccC
Confidence 47999999988823588889988766 4678999999999999999999999999999987 678899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.++++.|++.+++++.. |..|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 131 ~~~~~~~Ll~~g~~~n~~-d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~ 207 (269)
T 4b93_B 131 HFQVVKCLLDSNAKPNKK-DLSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLL-H 207 (269)
T ss_dssp CHHHHHHHHHTTCCSCCC-CTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH-T
T ss_pred hHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHH-C
Confidence 999999999999998754 999999999999999999999999999886 8999999999999999999999999999 8
Q ss_pred CCCccccccCCCCHHHHHHHcCc-HHHHHHHHHcCCC
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGN-TELFSLLKEAGAA 196 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~-~~i~~~L~~~ga~ 196 (437)
|+|+|.+|..|+||||+|+++++ .++++.|...++.
T Consensus 208 Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 208 GASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp TCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred CCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 99999999999999999988775 3444444444443
No 31
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-33 Score=276.93 Aligned_cols=208 Identities=21% Similarity=0.279 Sum_probs=185.7
Q ss_pred CchhhHHHHcCCcHHHHHHHH--------hhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcH
Q 013760 1 MDMIHFMWQQSRVILVLKELL--------GEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTV 72 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll--------~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tp 72 (437)
.||||.|+..|+ .++++.|+ +.+.+ ++..|.+|.||||+|+..|+.++|++|++.|+++ +..|.+|.||
T Consensus 126 ~t~Lh~Aa~~g~-~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~ 202 (373)
T 2fo1_E 126 RTVLHWIASNSS-AEKSEDLIVHEAKECIAAGAD-VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSA 202 (373)
T ss_dssp CCHHHHHHCTTC-CSCCTTHHHHHHHHHHHTCCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCH
T ss_pred CCHHHHHHHCCC-HHHHHHHHHHHHHHHHhcCCC-CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCH
Confidence 489999999999 98888887 44444 5678999999999999999999999999999987 6788999999
Q ss_pred HHHHHHcCCHHHHHHHHhCC---CCCCcccCCCCCcHHHHHHhCC---CHHHHHHhhcCCCCcc-------ccCCCCCCh
Q 013760 73 LHSAARMGHLEVVKALVSKD---PSTGFRTDKKGQTALHMAVKGQ---NEDIVLELIRPDPSVL-------KLEDNKGNT 139 (437)
Q Consensus 73 Lh~Aa~~g~~~iv~~Ll~~~---~~~~~~~d~~g~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~-------~~~d~~G~T 139 (437)
||+|+..|+.+++++|++.+ .+... .|..|.||||+|+..+ +.+++++|++.+.++. +..|.+|+|
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhh-cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCC
Confidence 99999999999999999987 45554 4899999999999998 8999999999987752 236789999
Q ss_pred HHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 140 ALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 140 pLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
|||+|+..|+.+++++|++..|+++|.+|..|.||||+|+..|+.+++++|+++|++.+..+..+.++.....
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQ 354 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHH
Confidence 9999999999999999998667999999999999999999999999999999999999888888877766543
No 32
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.3e-32 Score=264.98 Aligned_cols=206 Identities=25% Similarity=0.294 Sum_probs=188.2
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
|+||.|+..|+ .+.++.++...+...+..|..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+
T Consensus 26 ~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~ 103 (351)
T 3utm_A 26 DELLEAARSGN-EEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGH 103 (351)
T ss_dssp HHHHHHHHHTC-HHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC
T ss_pred hhHHHHHHcCC-HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCC
Confidence 68999999999 999999999877777789999999999999999999999999999987 6789999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCcccc-----------------------------
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKL----------------------------- 132 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~----------------------------- 132 (437)
.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.
T Consensus 104 ~~iv~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~ 181 (351)
T 3utm_A 104 YEVTELLLKHGACVNAM-DLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPELRERLTYEFKGHS 181 (351)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhhhHHHHHhhhcccH
Confidence 99999999999998754 899999999999999999999999987654 22
Q ss_pred -------------------------CCCCCChHHHHHHHc---CcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcH
Q 013760 133 -------------------------EDNKGNTALHIAIKK---GRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNT 184 (437)
Q Consensus 133 -------------------------~d~~G~TpLh~A~~~---g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~ 184 (437)
.+..|+||||+|+.. +..+++++|++ .|+++|.+|..|.||||+|+..|+.
T Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~ 260 (351)
T 3utm_A 182 LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFMTPLHVAAERAHN 260 (351)
T ss_dssp HHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHHcCCH
Confidence 346788999999999 66899999999 8999999999999999999999999
Q ss_pred HHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 185 ELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 185 ~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
+++++|+++|++.+..+..+.++.....
T Consensus 261 ~~v~~Ll~~ga~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 261 DVMEVLHKHGAKMNALDSLGQTALHRAA 288 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999888888877765543
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.4e-33 Score=252.95 Aligned_cols=186 Identities=24% Similarity=0.257 Sum_probs=168.1
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhC--CcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcC--CchhHhhhcCCCcHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEF--PNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEID--SNLAKIARNNGKTVLHSA 76 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~--~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~G~tpLh~A 76 (437)
+||||.|+..|+ .+++++|++.+ ++.....|..|.||||+|+..|+.+++++|++.| ++. +..|.+|.||||+|
T Consensus 37 ~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A 114 (228)
T 2dzn_A 37 RIPLHWSVSFQA-HEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLA 114 (228)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcCC-HHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHH
Confidence 589999999999 99999999998 5554448899999999999999999999999998 665 66788999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHh
Q 013760 77 ARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 156 (437)
Q Consensus 77 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 156 (437)
+..|+.+++++|++.+.++... |..|.||||+|+..|+.+++++|++.++..++.+|.+|+||||+|+..|+.+++++|
T Consensus 115 ~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 193 (228)
T 2dzn_A 115 VGKKWFEVSQFLIENGASVRIK-DKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLL 193 (228)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHhHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999999999998754 899999999999999999999999999555699999999999999999999999999
Q ss_pred hcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHH
Q 013760 157 LSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKE 192 (437)
Q Consensus 157 l~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~ 192 (437)
++..|++++.+|.+|.||+|+|.+. ++.++|++
T Consensus 194 l~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 194 VEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 9448999999999999999999754 45555543
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-33 Score=274.10 Aligned_cols=193 Identities=22% Similarity=0.302 Sum_probs=175.8
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcC---CchhHhhhcCCCcHHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEID---SNLAKIARNNGKTVLHSAA 77 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~---~~~~~~~~~~G~tpLh~Aa 77 (437)
+||||.|+..|+ .+++++|++.+.+. +..|.+|.||||+|+..|+.+++++|++.+ .++ +..|.+|.||||+|+
T Consensus 167 ~TpL~~A~~~g~-~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 167 NTPLMLAVLARR-RRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVA 243 (373)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCh-HHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHH
Confidence 589999999999 99999999998774 578899999999999999999999999987 344 567889999999999
Q ss_pred HcC---CHHHHHHHHhCCCCCCc-------ccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHc
Q 013760 78 RMG---HLEVVKALVSKDPSTGF-------RTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKK 147 (437)
Q Consensus 78 ~~g---~~~iv~~Ll~~~~~~~~-------~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~ 147 (437)
..| +.+++++|++.+++... ..|..|.||||+|+..|+.+++++|++.++..++.+|.+|+||||+|+..
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 998 89999999999988764 24678999999999999999999999887555699999999999999999
Q ss_pred CcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCc
Q 013760 148 GRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 197 (437)
Q Consensus 148 g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~ 197 (437)
|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 324 g~~~iv~~Ll~-~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 324 GRIEVVMYLIQ-QGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TCHHHHHHHHH-TTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCHHHHHHHHH-cCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99999999999 89999999999999999999999999999999998764
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=250.15 Aligned_cols=207 Identities=29% Similarity=0.277 Sum_probs=189.3
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
.||||.|+..|+ .+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|++.+++.....+..|.||||+|+..|
T Consensus 10 ~~~l~~A~~~g~-~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 10 TWDIVKATQYGI-YERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GCCHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred chHHHHHHHcCC-hHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 379999999999 9999999999876 45788999999999999999999999999999886666677999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCc-HHHHHHhhcc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGR-TQIVRCLLSI 159 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~-~~iv~~Ll~~ 159 (437)
+.+++++|++.+++.... |..|.||||.|+..|+.+++++|++.+.++ +.+|.+|.||||.|+..++ .+++++|++
T Consensus 88 ~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~L~~- 164 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSLI-DGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHSVDPTRLLLT- 164 (240)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCSSTTHHHHHH-
T ss_pred CHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCChHHHHHHHHh-
Confidence 999999999999988754 899999999999999999999999998876 8899999999999997766 789999998
Q ss_pred cCCCcccccc-CCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 160 EGIDVNSLNK-AGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 160 ~g~~~n~~n~-~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
.|++++..+. .|.||||+|+..++.+++++|+++|++....+..+.++.....
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAK 218 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHH
T ss_pred cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 8999999997 9999999999999999999999999999888888777766543
No 36
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.4e-32 Score=241.03 Aligned_cols=159 Identities=30% Similarity=0.430 Sum_probs=145.4
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
++|+.||+.|+ .++|+.|++.+.+ ++.+|.+|.||||+|+..|+.+++++|++.|+++ +.+|.+|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~-~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGN-KDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCC-HHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC
Confidence 47999999999 9999999999877 4678999999999999999999999999999998 7789999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccC
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEG 161 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 161 (437)
.+++++|++.+++++.. |.+|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|++ .|
T Consensus 83 ~~~v~~Ll~~gadvn~~-d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~G 159 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAK-DSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEVVKLLEK-QG 159 (169)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHT-C-
T ss_pred HHHHHHHHHCcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHH-CC
Confidence 99999999999998754 999999999999999999999999999886 8999999999999999999999999999 89
Q ss_pred CCccc
Q 013760 162 IDVNS 166 (437)
Q Consensus 162 ~~~n~ 166 (437)
++++.
T Consensus 160 A~ie~ 164 (169)
T 4gpm_A 160 GWLEH 164 (169)
T ss_dssp -----
T ss_pred CCcCC
Confidence 98865
No 37
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.5e-32 Score=251.75 Aligned_cols=185 Identities=28% Similarity=0.298 Sum_probs=170.5
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+..|
T Consensus 45 ~t~L~~A~~~~~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 122 (237)
T 3b7b_A 45 RTPLMEAAENNH-LEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122 (237)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHTTTCC-CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHhCC-HHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Confidence 489999999999 9999999998766 45688999999999999999999999999985444778899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 123 ~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ 199 (237)
T 3b7b_A 123 HVDLVKLLLSKGSDINIR-DNEENICLHWAAFSGCVDIAEILLAAKCDL-HAVNIHGDSPLHIAARENRYDCVVLFLS-R 199 (237)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHT-T
T ss_pred CHHHHHHHHHCCCCCCcc-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCHhHHHHHHH-c
Confidence 999999999999998754 899999999999999999999999999886 8899999999999999999999999999 8
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHH
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLL 190 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L 190 (437)
|++++.+|.+|.||||+|+..++.+.+..+
T Consensus 200 gad~~~~d~~g~t~l~~A~~~~~~~~~~~l 229 (237)
T 3b7b_A 200 DSDVTLKNKEGETPLQCASLNSQVWSALQM 229 (237)
T ss_dssp TCCTTCCCTTSCCHHHHSCTTCHHHHHHHH
T ss_pred CCCCCccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987554443
No 38
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-32 Score=274.03 Aligned_cols=204 Identities=27% Similarity=0.410 Sum_probs=180.5
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ +++|++|++++.+ .+..|..|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|
T Consensus 15 ~t~L~~Aa~~g~-~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 15 LTPLHVASFMGH-LPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCC-SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHT
T ss_pred CCHHHHHHHCCC-HHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCC
Confidence 589999999999 9999999998766 3567889999999999999999999999999887 678889999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.++++... |..|.||||+|+.+|+.+++++|++.+.+. +..+.+|.||||+|+..|+.+++++|++ .
T Consensus 92 ~~~~v~~Ll~~ga~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ 168 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLA-TTAGHTPLHIAAREGHVETVLALLEKEASQ-ACMTKKGFTPLHVAAKYGKVRVAELLLE-R 168 (437)
T ss_dssp CHHHHHHHHHHTCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH-T
T ss_pred CHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cCCCCCCCCHHHHHHHcCCHHHHHHHHh-C
Confidence 999999999999887754 888999999999999999999999988765 6778889999999999999999999998 7
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHH
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQ 210 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~ 210 (437)
|++++..+..|.||||.|+..++.+++++|++.|++.......+.++...
T Consensus 169 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 218 (437)
T 1n11_A 169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHI 218 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHH
Confidence 89999999999999999999999999999999998887666666665543
No 39
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-32 Score=251.87 Aligned_cols=193 Identities=30% Similarity=0.390 Sum_probs=176.2
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
.||||.|+..|+ .+++++|++.+++.....+..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|
T Consensus 43 ~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 43 VTLLHWAAINNR-IDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFG 120 (240)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHhCC-HHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcC
Confidence 489999999999 999999999999877777778999999999999999999999999887 668899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCC-HHHHHHhhcCCCCccccCCC-CCChHHHHHHHcCcHHHHHHhhc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQN-EDIVLELIRPDPSVLKLEDN-KGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~iv~~Ll~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
+.+++++|++.+++.... |..|.||||+|+..++ .++++.|++.+.++ +..+. +|+||||+|+..|+.+++++|++
T Consensus 121 ~~~~~~~Ll~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (240)
T 3eu9_A 121 HTSIVAYLIAKGQDVDMM-DQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV-NLGDKYHKNTALHWAVLAGNTTVISLLLE 198 (240)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT-TCCCTTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcccc-CCCCCcHHHHHHHhCChHHHHHHHHhcCCCc-chhhccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 999999999999988754 8999999999996655 88999999998887 66676 99999999999999999999999
Q ss_pred ccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Q 013760 159 IEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 198 (437)
Q Consensus 159 ~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~ 198 (437)
.|++++.+|..|.|||++|++.++.+++++|++++++..
T Consensus 199 -~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 199 -AGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp -HTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred -cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 799999999999999999999999999999999998754
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=258.20 Aligned_cols=187 Identities=22% Similarity=0.308 Sum_probs=170.9
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .++++.|++.+.+ .+..|.+|.||||+|+..|+.+++++|++.|++.. .+.+|.||||+|+..|
T Consensus 37 ~t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 37 VSPLHEACLGGH-LSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRG 112 (261)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTT
T ss_pred CCHHHHHHHcCC-HHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcC
Confidence 589999999999 9999999999866 45789999999999999999999999999998873 4567999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.+++.+.. |.+|.||||+|+..|+.+++++|++.+.++ + .|.+|+||||+|+..|+.+++++|++ .
T Consensus 113 ~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~-~ 188 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHK-ISHLGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVARTASEELACLLMD-F 188 (261)
T ss_dssp CHHHHHHHHHTTCCTTCC-BTTTBCHHHHHHHTTCHHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHHHHHHH-T
T ss_pred cHHHHHHHHHcCCCCCcC-CCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcCCHHHHHHHHH-c
Confidence 999999999999998754 899999999999999999999999999887 5 48899999999999999999999999 7
Q ss_pred CCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCc
Q 013760 161 GIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 197 (437)
Q Consensus 161 g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~ 197 (437)
|+|++.+|.+|+||+|+|+..+ +++++|++.+.+.
T Consensus 189 gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~ 223 (261)
T 2xai_A 189 GADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPP 223 (261)
T ss_dssp TCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCC
T ss_pred CCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCc
Confidence 9999999999999999999654 5889999887654
No 41
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.7e-32 Score=258.71 Aligned_cols=203 Identities=21% Similarity=0.177 Sum_probs=161.1
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCc----------ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPN----------LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGK 70 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~----------~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~ 70 (437)
.|+||.|+..|+ .+.+..++...|. ..+..|.+|.||||+|+..|+.+++++|++.|.++ +.+|.+|.
T Consensus 16 ~~~lH~Aa~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~ 93 (285)
T 3d9h_A 16 PRGSHMASMDGK-QGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHV 93 (285)
T ss_dssp ---------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCC
T ss_pred HHHHHHHhhcCC-CCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCC
Confidence 479999999999 8888887765432 24567899999999999999999999999999887 67899999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcH
Q 013760 71 TVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRT 150 (437)
Q Consensus 71 tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~ 150 (437)
||||+|+..|+.+++++|++.+++.... |.+|.||||+|+..|+.+++++|++.+.++ + .+.+|+||||+|+..|+.
T Consensus 94 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~g~~ 170 (285)
T 3d9h_A 94 SPLHEACLGGHLSCVKILLKHGAQVNGV-TADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAARRGHV 170 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTSCHHHHHHHHTCH
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999999988754 999999999999999999999999998876 4 345699999999999999
Q ss_pred HHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHHH
Q 013760 151 QIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQ 210 (437)
Q Consensus 151 ~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~ 210 (437)
+++++|++ .|++++.+|..|.||||+|+..++.+++++|++.|++.+. +..+.++...
T Consensus 171 ~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~ 228 (285)
T 3d9h_A 171 ECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHA 228 (285)
T ss_dssp HHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHH
T ss_pred HHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHH
Confidence 99999999 8999999999999999999999999999999999999874 4445555443
No 42
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=3.2e-32 Score=257.22 Aligned_cols=178 Identities=20% Similarity=0.188 Sum_probs=151.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch-------------------
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNL------------------- 61 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~------------------- 61 (437)
+||||.|+..|+ .+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.+++.
T Consensus 46 ~t~L~~A~~~g~-~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 46 QTALHLAAILGE-ASTVEKLYAAGAG-VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp CCHHHHHHHHTC-HHHHHHHHHTTCC-SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCHHHHHHHcCC-HHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 589999999999 9999999999877 4578899999999999999999999999987541
Q ss_pred ---------------------------hHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCC
Q 013760 62 ---------------------------AKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQ 114 (437)
Q Consensus 62 ---------------------------~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 114 (437)
.+..|.+|.||||+|+..|+.+++++|++.++++....+..|+||||+|+..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 24567789999999999999999999999999988764456999999999999
Q ss_pred CHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcC
Q 013760 115 NEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLG 182 (437)
Q Consensus 115 ~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~ 182 (437)
+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.|||+.|....
T Consensus 204 ~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 204 AASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLLRA-HGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTSSCHHHHHHHHH-TTCCCCCCC--------------
T ss_pred CHHHHHHHHHcCCCC-cccccCCCCHHHHHHHcCCcHHHHHHHH-cCCCcCcCCCcccccccccCCcc
Confidence 999999999998886 8999999999999999999999999999 89999999999999999997644
No 43
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=2.2e-31 Score=259.03 Aligned_cols=192 Identities=26% Similarity=0.303 Sum_probs=158.3
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcc--------------------------------cccCCCCCCcHHHHHHHcCCH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNL--------------------------------VMTTDLSCSTALHTAAAQGHI 48 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~--------------------------------~~~~d~~g~TpLh~Aa~~g~~ 48 (437)
+||||+|+..|+ .++|++|++.+.+. ++..|..|.||||+|+..|+.
T Consensus 60 ~TpLh~A~~~g~-~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 60 WTPLHNAVQMSR-EDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred cCHHHHHHHcCC-HHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 589999999999 99999999876432 334677888899999999999
Q ss_pred HHHHHHHhcCCchh---------HhhhcCCCcHHHHHHHcCCHHHHHHHHh-CCCCCC----------------------
Q 013760 49 DVVNFLLEIDSNLA---------KIARNNGKTVLHSAARMGHLEVVKALVS-KDPSTG---------------------- 96 (437)
Q Consensus 49 ~iv~~Ll~~~~~~~---------~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~-~~~~~~---------------------- 96 (437)
+++++|++.|+++. ...+..|.||||+|+..|+.+++++|++ .+.+++
T Consensus 139 ~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~ 218 (337)
T 4g8k_A 139 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 218 (337)
T ss_dssp HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTH
T ss_pred HHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccH
Confidence 99998888877652 2234568888888888888888888874 233322
Q ss_pred --------------cccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCC
Q 013760 97 --------------FRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGI 162 (437)
Q Consensus 97 --------------~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~ 162 (437)
..+|.+|+||||+|+..|+.++++.|++.....++.+|.+|+||||+|++.|+.+++++|++ .|+
T Consensus 219 ~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GA 297 (337)
T 4g8k_A 219 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK-RGA 297 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT-TSC
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCC
Confidence 12467899999999999999999999987655569999999999999999999999999999 899
Q ss_pred CccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCccc
Q 013760 163 DVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSK 199 (437)
Q Consensus 163 ~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~ 199 (437)
|+|.+ +|||+|+..++.+++++|+++||+++.
T Consensus 298 d~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 298 STDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp SSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred CCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 98764 699999999999999999999998764
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=4.4e-33 Score=260.81 Aligned_cols=193 Identities=24% Similarity=0.279 Sum_probs=168.0
Q ss_pred chhhHHHHcCCcHHHHHHHHh----hCCcccc---cCCCCCCcHHHHHH---HcCCHHHHHHHHhcCCchh---------
Q 013760 2 DMIHFMWQQSRVILVLKELLG----EFPNLVM---TTDLSCSTALHTAA---AQGHIDVVNFLLEIDSNLA--------- 62 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~----~~~~~~~---~~d~~g~TpLh~Aa---~~g~~~iv~~Ll~~~~~~~--------- 62 (437)
|+||.|++.|+ .+.++.|++ .+.++.. ..|.+|.||||+|+ ..|+.+++++|++.|++..
T Consensus 7 ~~L~~A~~~g~-~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 85 (260)
T 3jxi_A 7 PILFDIVSRGS-PDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP 85 (260)
T ss_dssp HHHHHHHHHTC-GGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHHhCC-HHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc
Confidence 69999999999 996666665 6655431 23578999999999 7799999999999875421
Q ss_pred -HhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccC--------------CCCCcHHHHHHhCCCHHHHHHhhc---
Q 013760 63 -KIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTD--------------KKGQTALHMAVKGQNEDIVLELIR--- 124 (437)
Q Consensus 63 -~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d--------------~~g~t~Lh~A~~~g~~~iv~~Ll~--- 124 (437)
...|.+|.||||+|+..|+.+++++|++.+++++.. | ..|.||||+|+..|+.+++++|++
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 164 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ-ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH 164 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc-ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 223448999999999999999999999999998765 5 579999999999999999999999
Q ss_pred CCCCccccCCCCCChHHHHHHHcCc---------HHHHHHhhcccCCCc-------cccccCCCCHHHHHHHcCcHHHHH
Q 013760 125 PDPSVLKLEDNKGNTALHIAIKKGR---------TQIVRCLLSIEGIDV-------NSLNKAGESPLDVAEKLGNTELFS 188 (437)
Q Consensus 125 ~~~~~~~~~d~~G~TpLh~A~~~g~---------~~iv~~Ll~~~g~~~-------n~~n~~G~T~L~~A~~~~~~~i~~ 188 (437)
.+.++ +.+|.+|+||||+|+..++ .+++++|++ .|+++ +.+|..|.||||+|+..|+.++++
T Consensus 165 ~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 165 KQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI-KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp CCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH-hCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 77776 8999999999999998887 799999999 89998 789999999999999999999999
Q ss_pred HHHHcCCCcc
Q 013760 189 LLKEAGAAHS 198 (437)
Q Consensus 189 ~L~~~ga~~~ 198 (437)
+|+++|++..
T Consensus 243 ~Ll~~g~~~~ 252 (260)
T 3jxi_A 243 HIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhCCCcc
Confidence 9999998654
No 45
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=2e-32 Score=259.41 Aligned_cols=191 Identities=24% Similarity=0.319 Sum_probs=176.1
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCc-ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHH---
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPN-LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAA--- 77 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~-~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa--- 77 (437)
+++|.|+..|+ ++.++.+++...+ .++..|.+|.||||+|+..|+.+++++|++.|+...+..|..|.||||+|+
T Consensus 78 ~~l~~a~~~~~-~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 78 SDAHPELVRRH-LVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp TTCCHHHHHHH-HHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred cCCCHHHHHHH-HHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 68899999999 9999999987654 356789999999999999999999999999998444788999999999999
Q ss_pred --HcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHH
Q 013760 78 --RMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRC 155 (437)
Q Consensus 78 --~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~ 155 (437)
..|+.++++.|++.+.+... .|..|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 66889999999999977654 4889999999999999999999999999886 8999999999999999999999999
Q ss_pred hhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 013760 156 LLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 195 (437)
Q Consensus 156 Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga 195 (437)
|++..|++++.+|..|.||||+|+..|+.+++++|++++.
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9987899999999999999999999999999999998753
No 46
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.5e-31 Score=234.56 Aligned_cols=168 Identities=27% Similarity=0.309 Sum_probs=107.6
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.|+..|+ .++++.|++.+++..+..|..|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|+
T Consensus 4 ~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 4 LSIHQLAAQGE-LDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGY 81 (172)
T ss_dssp CCHHHHHHTTC-HHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTC
T ss_pred hhHHHHHHcCC-HHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCC
Confidence 56677777777 777777776666655666666777777777777777777777666665 4556666667777776666
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccC
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEG 161 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 161 (437)
.+++++|++.+.+.... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .+
T Consensus 82 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~-~~ 158 (172)
T 3v30_A 82 TDIVGLLLERDVDINIY-DWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALGYRKVQQVIEN-HI 158 (172)
T ss_dssp HHHHHHHHTTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-HH
T ss_pred HHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHhCcHHHHHHHHH-HH
Confidence 66666666666665533 666666666666666666666666666554 5666666666666666666666666666 56
Q ss_pred CCccccccCCCCH
Q 013760 162 IDVNSLNKAGESP 174 (437)
Q Consensus 162 ~~~n~~n~~G~T~ 174 (437)
+++...|..|.||
T Consensus 159 ~~~~~~~~~~~~p 171 (172)
T 3v30_A 159 LKLFQSNLVPADP 171 (172)
T ss_dssp HHHSCC-------
T ss_pred HHHhcccCCCCCC
Confidence 6666666666655
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=3.2e-31 Score=236.80 Aligned_cols=164 Identities=25% Similarity=0.296 Sum_probs=154.6
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcH
Q 013760 27 LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTA 106 (437)
Q Consensus 27 ~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~ 106 (437)
+.+.+|..|.||||+|+..|+.+++++|++.++++ +..|.+|.||||+|+..|+.+++++|++.++++... |..|.||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~ 104 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTK-DFSGKTP 104 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTSCCH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCcH
Confidence 34568999999999999999999999999999887 678889999999999999999999999999988754 8999999
Q ss_pred HHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHH
Q 013760 107 LHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTEL 186 (437)
Q Consensus 107 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i 186 (437)
||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLE-LGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 99999999999999999998876 8899999999999999999999999999 799999999999999999999999999
Q ss_pred HHHHHHcC
Q 013760 187 FSLLKEAG 194 (437)
Q Consensus 187 ~~~L~~~g 194 (437)
+++|+++|
T Consensus 183 v~~Ll~~~ 190 (192)
T 2rfm_A 183 IKIFTEVR 190 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999865
No 48
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=7.5e-31 Score=230.09 Aligned_cols=167 Identities=27% Similarity=0.359 Sum_probs=153.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCC
Q 013760 35 CSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQ 114 (437)
Q Consensus 35 g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 114 (437)
+.||||.|+..|+.++++.|++.+++..+..|.+|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHIL-AKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhh-cccCCCHHHHHHHCC
Confidence 5789999999999999999999999877888999999999999999999999999999998754 899999999999999
Q ss_pred CHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcC
Q 013760 115 NEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAG 194 (437)
Q Consensus 115 ~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~g 194 (437)
+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|
T Consensus 81 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 81 YTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp CHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 999999999998886 8899999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCcccCCCCC
Q 013760 195 AAHSKDHGKP 204 (437)
Q Consensus 195 a~~~~~~~~~ 204 (437)
++....+..+
T Consensus 159 ~~~~~~~~~~ 168 (172)
T 3v30_A 159 LKLFQSNLVP 168 (172)
T ss_dssp HHHSCC----
T ss_pred HHHhcccCCC
Confidence 8876554443
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=3.2e-31 Score=252.98 Aligned_cols=188 Identities=26% Similarity=0.334 Sum_probs=164.9
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|.+|.||||+|+..|
T Consensus 74 ~t~L~~A~~~g~-~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 74 LTALHQACIDDN-VDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp CBHHHHHHHTTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHH
T ss_pred CCHHHHHHHcCC-HHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcc
Confidence 589999999999 9999999998876 4578999999999999999999999999999987 678999999999999999
Q ss_pred CHHHHHHHHhCC--------------------------CCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCC
Q 013760 81 HLEVVKALVSKD--------------------------PSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLED 134 (437)
Q Consensus 81 ~~~iv~~Ll~~~--------------------------~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d 134 (437)
+.++++.++... .......+..|.||||+|+..|+.+++++|++.+.++ +.+|
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-~~~d 229 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-NIKD 229 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCC
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-CCcC
Confidence 999998776532 2222335678999999999999999999999998876 8999
Q ss_pred CCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHc
Q 013760 135 NKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEA 193 (437)
Q Consensus 135 ~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ 193 (437)
.+|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|.+.....+.+++.+.
T Consensus 230 ~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~~~ 287 (299)
T 1s70_B 230 YDGWTPLHAAAHWGKEEACRILVE-NLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQ 287 (299)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTTTSCCSGGGHHHHHHHHHT
T ss_pred CCCCcHHHHHHhcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 8999999999999999999765444444444443
No 50
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.6e-30 Score=226.87 Aligned_cols=160 Identities=25% Similarity=0.287 Sum_probs=139.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhC
Q 013760 34 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 113 (437)
Q Consensus 34 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 113 (437)
+|.||||.|+..|+.++++.|++.+.++ +.+|.+|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL-GKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHc
Confidence 5788999999999999999999888775 667888999999999999999999999988887654 88889999999999
Q ss_pred CCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHc
Q 013760 114 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEA 193 (437)
Q Consensus 114 g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ 193 (437)
|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++
T Consensus 80 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp TCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 9999999999888776 7888899999999999999999999998 7899999999999999999999999999999887
Q ss_pred CCCc
Q 013760 194 GAAH 197 (437)
Q Consensus 194 ga~~ 197 (437)
+++.
T Consensus 158 ~~~~ 161 (167)
T 3v31_A 158 LLKL 161 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 51
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=7.5e-31 Score=249.72 Aligned_cols=187 Identities=19% Similarity=0.179 Sum_probs=170.3
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCC-CcHHHHHHHc
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNG-KTVLHSAARM 79 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G-~tpLh~Aa~~ 79 (437)
+||||.|+..|+ .+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..| .||||+|+..
T Consensus 63 ~t~L~~A~~~g~-~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 63 EFPLHQAATLED-TKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp CCHHHHHTTSSS-CHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHT
T ss_pred CCHHHHHHHcCC-HHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHc
Confidence 589999999999 9999999999877 4568999999999999999999999999999987 6788888 7999999999
Q ss_pred CCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChH-HHHHHHcCcHHHHHHhhc
Q 013760 80 GHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTA-LHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 80 g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~Tp-Lh~A~~~g~~~iv~~Ll~ 158 (437)
|+.+++++|++.+++... ...|.||||+|+..|+.+++++|++.+.++ +.+|.+|+|| ||+|+..|+.+++++|++
T Consensus 140 ~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~ 216 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAIDNKDIEMLQALFK 216 (285)
T ss_dssp TCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBCCTTHHHHHHHTCHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCcccc--ccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCCChHHHHHHHcCCHHHHHHHHH
Confidence 999999999999988732 238999999999999999999999998776 8899999998 999999999999999999
Q ss_pred ccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCC
Q 013760 159 IEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDH 201 (437)
Q Consensus 159 ~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~ 201 (437)
.|++++..|. .|+..++.+++++|+++|++.....
T Consensus 217 -~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~~~ 251 (285)
T 3kea_A 217 -YDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYKSDS 251 (285)
T ss_dssp -SCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTTCT
T ss_pred -cCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCCcc
Confidence 8999999884 4567899999999999998875543
No 52
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=5.8e-30 Score=224.05 Aligned_cols=161 Identities=31% Similarity=0.426 Sum_probs=146.0
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHH
Q 013760 30 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHM 109 (437)
Q Consensus 30 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~ 109 (437)
.....+.||||.|+..|+.+++++|++.|.++ +.+|.+|.||||+|+..|+.+++++|++.+.+.... |..|.||||+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~ 86 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAV-DHAGMTPLRL 86 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHH
Confidence 34567789999999999999999999999887 678889999999999999999999999999887754 8899999999
Q ss_pred HHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHH
Q 013760 110 AVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSL 189 (437)
Q Consensus 110 A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~ 189 (437)
|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 164 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAFDISIDNGNEDLAEI 164 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 99999999999999998876 8899999999999999999999999999 799999999999999999999999999999
Q ss_pred HHHcC
Q 013760 190 LKEAG 194 (437)
Q Consensus 190 L~~~g 194 (437)
|++.|
T Consensus 165 L~~~G 169 (169)
T 2y1l_E 165 LQKLN 169 (169)
T ss_dssp HHTC-
T ss_pred HHHcC
Confidence 99876
No 53
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=2.7e-30 Score=223.97 Aligned_cols=158 Identities=28% Similarity=0.471 Sum_probs=130.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhC
Q 013760 34 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 113 (437)
Q Consensus 34 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 113 (437)
...||||.|+..|+.+++++|++.+.++ +..|.+|.||||+|+. |+.+++++|++.++++... |..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK-DRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHc
Confidence 5678888888888888888888888776 6677888888888888 8888888888888877644 78888888888888
Q ss_pred CCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCC-ccccccCCCCHHHHHHHcCcHHHHHHHHH
Q 013760 114 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID-VNSLNKAGESPLDVAEKLGNTELFSLLKE 192 (437)
Q Consensus 114 g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~-~n~~n~~G~T~L~~A~~~~~~~i~~~L~~ 192 (437)
|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++ ++..|..|.||||+|+..++.+++++|++
T Consensus 81 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVK-HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-ccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 8888888888887665 7788888888888888888888888888 5666 68888888888888888888888888888
Q ss_pred cCCC
Q 013760 193 AGAA 196 (437)
Q Consensus 193 ~ga~ 196 (437)
+|++
T Consensus 159 ~GAd 162 (162)
T 1ihb_A 159 NGAG 162 (162)
T ss_dssp TC--
T ss_pred hCCC
Confidence 8874
No 54
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.6e-29 Score=232.36 Aligned_cols=175 Identities=26% Similarity=0.306 Sum_probs=155.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhc-CCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCC----cccCCCCCcHHH
Q 013760 34 SCSTALHTAAAQGHIDVVNFLLEI-DSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTG----FRTDKKGQTALH 108 (437)
Q Consensus 34 ~g~TpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~----~~~d~~g~t~Lh 108 (437)
.|.||||+|+..|+.++++.|++. +.++ +.+|.+|.||||+|+..|+.+++++|++.+++.. ...|.+|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999998 7776 7789999999999999999999999999988753 234779999999
Q ss_pred HHHhCCCHHHHHHhhcCCCCccccCCC-------------CCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHH
Q 013760 109 MAVKGQNEDIVLELIRPDPSVLKLEDN-------------KGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPL 175 (437)
Q Consensus 109 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~-------------~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L 175 (437)
+|+..|+.+++++|++.+.++ +.++. +|+||||+|+..|+.+++++|++ .|+++|.+|..|.|||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-HGADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHH
Confidence 999999999999999998776 55544 79999999999999999999999 7999999999999999
Q ss_pred HHHHHcCcHHHH----HHHHHcCCCcc------cCCCCCCChHHHH
Q 013760 176 DVAEKLGNTELF----SLLKEAGAAHS------KDHGKPPSATKQL 211 (437)
Q Consensus 176 ~~A~~~~~~~i~----~~L~~~ga~~~------~~~~~~~~~~~~~ 211 (437)
|+|+..++.+++ ++|+++|++.. ..+..+.++....
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A 204 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLA 204 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHH
Confidence 999999999988 99999999873 5556666665544
No 55
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4.1e-30 Score=222.80 Aligned_cols=156 Identities=24% Similarity=0.330 Sum_probs=145.2
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.|+..|+ .++++.|++.+++. +..|..|.||||+|+. |+.+++++|++.|+++ +.+|..|.||||+|+..|+
T Consensus 7 ~~L~~A~~~g~-~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 7 NELASAAARGD-LEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp HHHHHHHHHTC-HHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred hHHHHHHHcCC-HHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC
Confidence 69999999999 99999999988764 5789999999999999 9999999999999987 6789999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccC
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEG 161 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 161 (437)
.+++++|++.++++... |.+|.||||+|+..|+.+++++|++.+++.++.+|.+|+||||+|+..|+.+++++|++ .|
T Consensus 83 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~G 160 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIE-DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA-NG 160 (162)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TC
T ss_pred HHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH-hC
Confidence 99999999999988754 89999999999999999999999999998779999999999999999999999999999 77
Q ss_pred CC
Q 013760 162 ID 163 (437)
Q Consensus 162 ~~ 163 (437)
+|
T Consensus 161 Ad 162 (162)
T 1ihb_A 161 AG 162 (162)
T ss_dssp --
T ss_pred CC
Confidence 64
No 56
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=7.7e-30 Score=225.33 Aligned_cols=165 Identities=25% Similarity=0.318 Sum_probs=124.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhC
Q 013760 34 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 113 (437)
Q Consensus 34 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 113 (437)
++.+|||.|+..|+.++++.|++.+....+..|.+|.||||+|+..|+.+++++|++.+.++... |..|.||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM-NRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHc
Confidence 56677788888888888887777755544667777778888888888888888887777776643 77778888888888
Q ss_pred CCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHc
Q 013760 114 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEA 193 (437)
Q Consensus 114 g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ 193 (437)
|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.+++++|+++
T Consensus 83 ~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160 (179)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 8888888888777665 7777788888888888888888888887 6788888888888888888887888888888888
Q ss_pred CCCcccCC
Q 013760 194 GAAHSKDH 201 (437)
Q Consensus 194 ga~~~~~~ 201 (437)
|++.....
T Consensus 161 g~~~~~~~ 168 (179)
T 3f6q_A 161 GQNLNRIP 168 (179)
T ss_dssp TCCCSCBC
T ss_pred hcCcccCC
Confidence 87775543
No 57
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.8e-30 Score=223.99 Aligned_cols=161 Identities=28% Similarity=0.374 Sum_probs=142.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHH
Q 013760 31 TDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMA 110 (437)
Q Consensus 31 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A 110 (437)
.|.+|.||||.|+..|+.++++.|++.+.......+..|.||||+|+..|+.+++++|++.++++... |.+|.||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK-DKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCcc-CCCCCCHHHHH
Confidence 46788999999999999999999998766554667788999999999999999999999999888754 88999999999
Q ss_pred HhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHH
Q 013760 111 VKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLL 190 (437)
Q Consensus 111 ~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L 190 (437)
+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|.. ++.+++++|
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGGGSCT-TCHHHHHHH
T ss_pred HHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhHhHhc-CChHHHHHH
Confidence 9999999999999998876 8899999999999999999999999999 799999999999999999776 889999999
Q ss_pred HHcCC
Q 013760 191 KEAGA 195 (437)
Q Consensus 191 ~~~ga 195 (437)
++.|+
T Consensus 160 ~~~gA 164 (165)
T 3twr_A 160 RGDAA 164 (165)
T ss_dssp HTC--
T ss_pred hhccc
Confidence 98876
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=5.4e-29 Score=223.49 Aligned_cols=180 Identities=22% Similarity=0.230 Sum_probs=162.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHH
Q 013760 32 DLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAV 111 (437)
Q Consensus 32 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 111 (437)
+..+.||||.|+..|+.+.++.|++.+....+..|.+|.||||+|+..|+.+++++|++.++++... |..|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ-NSISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHH
Confidence 3578999999999999999999999988444778999999999999999999999999999998754 899999999999
Q ss_pred hCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCc-----HHH
Q 013760 112 KGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGN-----TEL 186 (437)
Q Consensus 112 ~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~-----~~i 186 (437)
..|+.+++++|++.++..++.+|.+|+||||.|+..|+.+++++|++..+++++.+|..|.||||+|+..++ .++
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~ 160 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDI 160 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHH
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHH
Confidence 999999999999766655689999999999999999999999999994449999999999999999999988 999
Q ss_pred HHHHHHcCCCcccCCCCCCChHHHHH
Q 013760 187 FSLLKEAGAAHSKDHGKPPSATKQLK 212 (437)
Q Consensus 187 ~~~L~~~ga~~~~~~~~~~~~~~~~~ 212 (437)
+++|+++|++.+..+..+.++.....
T Consensus 161 v~~Ll~~ga~~~~~~~~g~t~l~~A~ 186 (201)
T 3hra_A 161 VKLLMENGADQSIKDNSGRTAMDYAN 186 (201)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHCCCCCCccCCCCCCHHHHHH
Confidence 99999999999888888777765543
No 59
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.3e-29 Score=223.79 Aligned_cols=166 Identities=20% Similarity=0.244 Sum_probs=156.1
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+++||.|+..|+ .++++.|++.++...+..|..|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|
T Consensus 6 ~~~l~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 6 MDDIFTQCREGN-AVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp -CCHHHHHHHTC-HHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHcCC-HHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcC
Confidence 479999999999 999999999988878889999999999999999999999999999987 678999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|+..++.+++++|++ .
T Consensus 84 ~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~L~~-~ 160 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAV-NEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNKYGEMPVDKAKAPLRELLRERAEK-M 160 (179)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCTTSCCGGGGSCHHHHHHHHHHHHH-T
T ss_pred CHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhccCCCCcHHHHHHHHHHHHHHHHHH-h
Confidence 999999999999998754 899999999999999999999999999886 8899999999999999999999999999 8
Q ss_pred CCCccccccCC
Q 013760 161 GIDVNSLNKAG 171 (437)
Q Consensus 161 g~~~n~~n~~G 171 (437)
|++++..+..+
T Consensus 161 g~~~~~~~~~~ 171 (179)
T 3f6q_A 161 GQNLNRIPYKD 171 (179)
T ss_dssp TCCCSCBCCCC
T ss_pred hcCcccCCccc
Confidence 99999887665
No 60
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=2.4e-30 Score=238.78 Aligned_cols=179 Identities=27% Similarity=0.293 Sum_probs=157.7
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCc---hhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcH
Q 013760 30 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSN---LAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTA 106 (437)
Q Consensus 30 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~---~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~ 106 (437)
.+|.+|.||||+|+..|+.++++.|++.+.. ..+..|..|.||||+|+..|+.+++++|++.++++... |..|.||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~ 81 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELR-DFRGNTP 81 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCC-CTTCCCH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCH
Confidence 4788999999999999999999999998763 23678889999999999999999999999999988754 8999999
Q ss_pred HHHHHhCCCHHHHHHhhcCCCC-----ccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCcccccc-CCCCHHHHHHH
Q 013760 107 LHMAVKGQNEDIVLELIRPDPS-----VLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNK-AGESPLDVAEK 180 (437)
Q Consensus 107 Lh~A~~~g~~~iv~~Ll~~~~~-----~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~-~G~T~L~~A~~ 180 (437)
||+|+..|+.+++++|++.+.+ .++..|.+|+||||+|+..|+.+++++|++ .|++++.++. .|.||||+|+.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS-LGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999998753 357889999999999999999999999999 8999999998 99999999999
Q ss_pred cCcHHHHHHHHHcCCCcccCCCCCCChHHH
Q 013760 181 LGNTELFSLLKEAGAAHSKDHGKPPSATKQ 210 (437)
Q Consensus 181 ~~~~~i~~~L~~~ga~~~~~~~~~~~~~~~ 210 (437)
.++.+++++|+++|++....+..+.++...
T Consensus 161 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 190 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGADVNRVTYQGYSPYQL 190 (236)
T ss_dssp TTCHHHHHHHHTTTCCSCCCCTTCCCGGGG
T ss_pred cCCHHHHHHHHHcCCCCCcccCCCCCHHHH
Confidence 999999999999999998887777776543
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=3.1e-29 Score=215.61 Aligned_cols=150 Identities=29% Similarity=0.389 Sum_probs=103.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCC
Q 013760 36 STALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQN 115 (437)
Q Consensus 36 ~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 115 (437)
.||||.|+..|+.+++++|++.|++.. .|..|.||||+|+..|+.+++++|++.++++... |..|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR-TKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCh
Confidence 466777777777777777776666542 4566677777777777777777777766665533 6667777777777777
Q ss_pred HHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHH
Q 013760 116 EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLL 190 (437)
Q Consensus 116 ~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L 190 (437)
.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 77777777766554 6667777777777777777777777776 5777777777777777777777777777665
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3.9e-29 Score=217.99 Aligned_cols=157 Identities=24% Similarity=0.289 Sum_probs=146.0
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
.||||.|+..|+ .++++.|++.+.+ .+..|..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|
T Consensus 4 ~t~L~~A~~~g~-~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 4 SLSVHQLAAQGE-MLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKG 80 (167)
T ss_dssp CCCHHHHHHTTC-HHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHCCC-HHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcC
Confidence 489999999999 9999999999765 5678999999999999999999999999999887 678899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 160 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 160 (437)
+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 81 ~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~-~ 157 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEY-DWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGYRSVQQVIES-H 157 (167)
T ss_dssp CHHHHHHHHHHTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-H
T ss_pred CHHHHHHHHHCCCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH-H
Confidence 999999999999998754 899999999999999999999999998876 8899999999999999999999999998 4
Q ss_pred CCC
Q 013760 161 GID 163 (437)
Q Consensus 161 g~~ 163 (437)
+.+
T Consensus 158 ~~~ 160 (167)
T 3v31_A 158 LLK 160 (167)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=8.5e-29 Score=216.61 Aligned_cols=152 Identities=29% Similarity=0.391 Sum_probs=143.4
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
|+||.|++.|+ .+++++|++.+.+ .+..|.+|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|+
T Consensus 16 ~~l~~A~~~g~-~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 16 KKLLEAARAGR-DDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHcCC-HHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCC
Confidence 68999999999 9999999999876 4578999999999999999999999999999887 6788999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhc
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
.+++++|++.+++.... |.+|.||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|+..|+.+++++|++
T Consensus 93 ~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 93 LEIVEVLLKNGADVNAN-DMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 99999999999998754 899999999999999999999999999886 8899999999999999999999999997
No 64
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=8.8e-29 Score=212.76 Aligned_cols=149 Identities=24% Similarity=0.300 Sum_probs=140.3
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
|+||.|+..|+ .+++++|++.+++.. .|..|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|+
T Consensus 4 ~~L~~A~~~g~-~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 4 KKLLEAARAGQ-DDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHHHcCC-HHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCh
Confidence 69999999999 999999999988653 6889999999999999999999999999987 6788999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHh
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 156 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 156 (437)
.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAK-DMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999998754 899999999999999999999999998876 88999999999999999999999987
No 65
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=8.9e-29 Score=220.91 Aligned_cols=154 Identities=23% Similarity=0.242 Sum_probs=144.5
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
+||||.|+..|+ .+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|++.|+++ +..|.+|.||||+|+..|
T Consensus 36 ~t~L~~A~~~g~-~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 36 RTPLMVACMLGM-ENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp CCHHHHHHHHTC-GGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred CCHHHHHHHcCC-HHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcC
Confidence 589999999999 9999999999776 4578899999999999999999999999999987 678899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSI 159 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 159 (437)
+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++.
T Consensus 113 ~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDR-NLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp CHHHHHHHHHTTCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 999999999999998754 899999999999999999999999998876 88999999999999999999999999983
No 66
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=1.2e-29 Score=246.31 Aligned_cols=194 Identities=16% Similarity=0.173 Sum_probs=157.4
Q ss_pred hhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC--
Q 013760 4 IHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH-- 81 (437)
Q Consensus 4 Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~-- 81 (437)
+|.|+..+. .++++.|++.+.++....|.+|.||||+|+..|+.++|++|+++|+++ +.+|.+|+||||+|+..|+
T Consensus 101 ~~~a~~~~~-~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 101 QHVSFDSLL-QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp ---CHHHHH-HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHH
T ss_pred hHHHHHhhH-HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccc
Confidence 477777777 888888888776644338999999999999999999999999999998 6889999999999999998
Q ss_pred -HHHHHHHHhCCCCCCcccCCCCCcHHHHHHh----CCCHHHHHHhhcC--------------------CCCccccCCCC
Q 013760 82 -LEVVKALVSKDPSTGFRTDKKGQTALHMAVK----GQNEDIVLELIRP--------------------DPSVLKLEDNK 136 (437)
Q Consensus 82 -~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~----~g~~~iv~~Ll~~--------------------~~~~~~~~d~~ 136 (437)
.++++.|++.+.......|..|+||||+|+. .|+.++++.|++. +.+ ++.+|.+
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~-~~~~~~~ 257 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK-PNDKNGE 257 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC-ccccccc
Confidence 6778888877633334569999999999999 9999999999876 444 4889999
Q ss_pred CChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCChHH
Q 013760 137 GNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATK 209 (437)
Q Consensus 137 G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~~~ 209 (437)
|.||||.|+. +++|++. ++|.+|..|+||||+|+..|+.+++++|+++|++....+..+.++..
T Consensus 258 g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 258 RKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 321 (327)
T ss_dssp --CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred CCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 9999999986 8899983 69999999999999999999999999999999999888887777654
No 67
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.3e-28 Score=211.98 Aligned_cols=152 Identities=26% Similarity=0.402 Sum_probs=74.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCC
Q 013760 36 STALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQN 115 (437)
Q Consensus 36 ~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 115 (437)
.||||.|+..|+.++++.|++......+..|.+|.||||+ +..|+.+++++|++.++++... |..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQ-DTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCc
Confidence 3455555555555555555544111123344445555555 4445555555555554444322 4445555555555555
Q ss_pred HHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHH
Q 013760 116 EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKE 192 (437)
Q Consensus 116 ~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~ 192 (437)
.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ . ++++.+|..|.||||+|+..++.+++++|++
T Consensus 81 ~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAA-E-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHT-T-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHh-c-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 55555555544443 4445555555555555555555555554 2 4555555555555555555555555555543
No 68
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=1.1e-29 Score=246.59 Aligned_cols=169 Identities=21% Similarity=0.241 Sum_probs=142.2
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCC---HHHHHHHHhcCCchhHhhhcCCCcHHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGH---IDVVNFLLEIDSNLAKIARNNGKTVLHSAA 77 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~---~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa 77 (437)
+||||+|+..|+ .++|++|++.+.+. +.+|.+|.||||+|+..|+ .++++.|++.+....+.+|.+|+||||+|+
T Consensus 132 ~TpLh~Aa~~g~-~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 209 (327)
T 1sw6_A 132 NTPLHWLTSIAN-LELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHII 209 (327)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHH
T ss_pred CcHHHHHHHcCC-HHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHH
Confidence 589999999999 99999999998774 5789999999999999999 788888888874445788999999999999
Q ss_pred H----cCCHHHHHHHHhC--------------------CCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccC
Q 013760 78 R----MGHLEVVKALVSK--------------------DPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLE 133 (437)
Q Consensus 78 ~----~g~~~iv~~Ll~~--------------------~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~ 133 (437)
. .|+.+++++|++. +.++.. .|..|.||||.|+. +++|++.+ ++.+
T Consensus 210 ~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~-~~~~g~t~L~~a~~------~~~Ll~~~---~n~~ 279 (327)
T 1sw6_A 210 ITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND-KNGERKDSILENLD------LKWIIANM---LNAQ 279 (327)
T ss_dssp HHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHHT---TTCC
T ss_pred HHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc-ccccCCChhHHHHH------HHHHHHhC---CCCC
Confidence 9 9999999999987 666654 48999999999996 88888873 5889
Q ss_pred CCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcC
Q 013760 134 DNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLG 182 (437)
Q Consensus 134 d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~ 182 (437)
|.+|+||||+|+..|+.+++++|++ .|+|++.+|..|+||||+|++.|
T Consensus 280 d~~G~TpLh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 280 DSNGDTCLNIAARLGNISIVDALLD-YGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHH-TTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHhcC
Confidence 9999999999999999999999999 89999999999999999998654
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=6.6e-29 Score=216.10 Aligned_cols=154 Identities=24% Similarity=0.270 Sum_probs=143.6
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.|+..|+ .++++.|++..+......|..|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+
T Consensus 10 ~~l~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 87 (165)
T 3twr_A 10 RQLLEAAKAGD-VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGH 87 (165)
T ss_dssp HHHHHHHHHTC-HHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHhCC-HHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCc
Confidence 79999999999 999999999887777788999999999999999999999999999987 6789999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccC
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEG 161 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 161 (437)
.+++++|++.+.++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+. ++.+++++|++ .|
T Consensus 88 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~-~~~~i~~~L~~-~g 163 (165)
T 3twr_A 88 YEVAELLVKHGAVVNVA-DLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGNTPLDLVKD-GDTDIQDLLRG-DA 163 (165)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTGGGSCT-TCHHHHHHHHT-C-
T ss_pred HHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCChhHhHhc-CChHHHHHHhh-cc
Confidence 99999999999998754 899999999999999999999999998876 8999999999999877 89999999998 55
No 70
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.3e-28 Score=211.99 Aligned_cols=151 Identities=23% Similarity=0.299 Sum_probs=141.2
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.|+..|+ .++++.|++..+...+..|..|.||||+ +..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+
T Consensus 4 ~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 4 DRLSGAAARGD-VQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred hHHHHHHHhCC-HHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCc
Confidence 79999999999 9999999999555567889999999999 9999999999999999987 7789999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhc
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
.+++++|++.++++... |.+|+||||+|+..|+.+++++|++. .++ +.+|.+|+||||+|+..|+.+++++|++
T Consensus 81 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVP-DGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 99999999999988754 89999999999999999999999998 554 8899999999999999999999999987
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1e-28 Score=230.68 Aligned_cols=177 Identities=20% Similarity=0.236 Sum_probs=155.4
Q ss_pred CCcHHHHHHHcCCHH----HHHHHHhcCCchhH---hhhcCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCcc------
Q 013760 35 CSTALHTAAAQGHID----VVNFLLEIDSNLAK---IARNNGKTVLHSAARM---GHLEVVKALVSKDPSTGFR------ 98 (437)
Q Consensus 35 g~TpLh~Aa~~g~~~----iv~~Ll~~~~~~~~---~~~~~G~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~------ 98 (437)
|.||||.|+..|+.+ ++++|++.|.++.. ..|.+|.||||+|+.. |+.+++++|++.+++....
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 789999999999997 66777778888733 2789999999999999 9999999999987765422
Q ss_pred ----cCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCC-------------CChHHHHHHHcCcHHHHHHhhcc--
Q 013760 99 ----TDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNK-------------GNTALHIAIKKGRTQIVRCLLSI-- 159 (437)
Q Consensus 99 ----~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~-------------G~TpLh~A~~~g~~~iv~~Ll~~-- 159 (437)
.|..|.||||+|+..|+.+++++|++.+.++ +.+|.. |+||||+|+..|+.+++++|++.
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 2467999999999999999999999998876 777776 99999999999999999999986
Q ss_pred cCCCccccccCCCCHHHHHHH--cCcHH-------HHHHHHHcCCCc-------ccCCCCCCChHHHHH
Q 013760 160 EGIDVNSLNKAGESPLDVAEK--LGNTE-------LFSLLKEAGAAH-------SKDHGKPPSATKQLK 212 (437)
Q Consensus 160 ~g~~~n~~n~~G~T~L~~A~~--~~~~~-------i~~~L~~~ga~~-------~~~~~~~~~~~~~~~ 212 (437)
.|+++|.+|..|+||||+|+. .++.+ ++++|+++|++. +..+..+.++.....
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAA 229 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHH
Confidence 799999999999999999999 78888 999999999998 667777777766543
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=1.6e-28 Score=231.60 Aligned_cols=171 Identities=22% Similarity=0.262 Sum_probs=140.2
Q ss_pred CchhhHHHHc---CCcHHHHHHHHhhCCcc------c----ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhc
Q 013760 1 MDMIHFMWQQ---SRVILVLKELLGEFPNL------V----MTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARN 67 (437)
Q Consensus 1 ~t~Lh~A~~~---g~~~~~vk~Ll~~~~~~------~----~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 67 (437)
+||||.|+.. |+ .+++++|++.+.+. + ...|..|.||||+|+..|+.++|++|+++|+++ +..+.
T Consensus 55 ~tpL~~A~~~~~~g~-~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~ 132 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQ-NDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAAN 132 (273)
T ss_dssp CCHHHHHHHSCBTTB-CHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBC
T ss_pred CCHHHHHHHHHhcCC-hHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Ccccc
Confidence 5899999987 99 99999999986431 1 225679999999999999999999999999987 55665
Q ss_pred --------------CCCcHHHHHHHcCCHHHHHHHHh---CCCCCCcccCCCCCcHHHHHHhCCC---------HHHHHH
Q 013760 68 --------------NGKTVLHSAARMGHLEVVKALVS---KDPSTGFRTDKKGQTALHMAVKGQN---------EDIVLE 121 (437)
Q Consensus 68 --------------~G~tpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~~g~---------~~iv~~ 121 (437)
.|.||||+|+..|+.+++++|++ .+.+++. +|.+|+||||+|+..|+ .+++++
T Consensus 133 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~ 211 (273)
T 2pnn_A 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSMYNE 211 (273)
T ss_dssp SGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHHHHH
Confidence 79999999999999999999999 8888875 49999999999999988 799999
Q ss_pred hhcCCCCcc------ccCCCCCChHHHHHHHcCcHHHHHHhhcccCC-CccccccCCCCHH
Q 013760 122 LIRPDPSVL------KLEDNKGNTALHIAIKKGRTQIVRCLLSIEGI-DVNSLNKAGESPL 175 (437)
Q Consensus 122 Ll~~~~~~~------~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~-~~n~~n~~G~T~L 175 (437)
|++.+.++. +.+|.+|+||||+|+..|+.+++++|++ .|+ |+......+.+|-
T Consensus 212 Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 212 ILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQ-REIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHTC-------------
T ss_pred HHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHH-CCCCCchhhhhhhhhcc
Confidence 999887652 3589999999999999999999999999 677 7877777666653
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=5.6e-31 Score=242.58 Aligned_cols=180 Identities=20% Similarity=0.150 Sum_probs=136.0
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 81 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~ 81 (437)
||||.|+..|+ .++++.|++.+.+ ++..|.+|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+
T Consensus 23 t~L~~A~~~g~-~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 23 VLLLDAALTGE-LEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHcCC-HHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC
Confidence 67888888888 8888888877665 3457778888888888888888888888887776 5677778888888888888
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCcHHHHH--HhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcc
Q 013760 82 LEVVKALVSKDPSTGFRTDKKGQTALHMA--VKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSI 159 (437)
Q Consensus 82 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A--~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 159 (437)
.+++++|++.++++....+.+|+||||+| +..|+.+++++|++.++++ +.+|..|.||+|.++..+.. ++|++
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~~l~~~~~~~~~---~~ll~- 174 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM-GLMNSGAVYALWDYSAEFGD---ELSFR- 174 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT-TTSGGGEEEESSCBCCSSTT---BCCBC-
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc-ccccCCchHHHHHHhhcccc---ccCcc-
Confidence 88888888888777765446788888888 7888888888888877665 66777777887765544332 45565
Q ss_pred cCCC--ccccccCCCCHHHHHHHcCcHHHHHH
Q 013760 160 EGID--VNSLNKAGESPLDVAEKLGNTELFSL 189 (437)
Q Consensus 160 ~g~~--~n~~n~~G~T~L~~A~~~~~~~i~~~ 189 (437)
.|++ ++.+|..|.||||+|+..|+.++++.
T Consensus 175 ~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 175 EGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp TTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred ccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 5776 67788888888888888888776653
No 74
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=8.7e-28 Score=227.48 Aligned_cols=157 Identities=26% Similarity=0.346 Sum_probs=145.2
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHH-----HcCCHHHHHHHHhcCCchhHhhhcCCCcHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAA-----AQGHIDVVNFLLEIDSNLAKIARNNGKTVLHS 75 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa-----~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~ 75 (437)
+||||.|+..|+ .++++.|++.++...+..|..|.||||+|+ ..|+.++++.|++.|... ...|..|.||||+
T Consensus 112 ~T~Lh~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~ 189 (276)
T 4hbd_A 112 NTALHYSVSHAN-FPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTALML 189 (276)
T ss_dssp CCHHHHHHHTTC-HHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHH
T ss_pred CCHHHHHHHCCC-HHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHH
Confidence 589999999999 999999999998667789999999999999 678999999999999765 6678889999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhc-CCCCccccCCCCCChHHHHHHHcCcHHHHH
Q 013760 76 AARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIR-PDPSVLKLEDNKGNTALHIAIKKGRTQIVR 154 (437)
Q Consensus 76 Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~-~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~ 154 (437)
|+..|+.+++++|++.+++++.. |.+|+||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..|+.++++
T Consensus 190 A~~~g~~~~v~~Ll~~gad~n~~-d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~~g~TpL~~A~~~g~~~iv~ 267 (276)
T 4hbd_A 190 AVSHGRVDVVKALLACEADVNVQ-DDDGSTALMCACEHGHKEIAGLLLAVPSCDI-SLTDRDGSTALMVALDAGQSEIAS 267 (276)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC-cCcCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999998755 9999999999999999999999999 56665 899999999999999999999999
Q ss_pred HhhcccC
Q 013760 155 CLLSIEG 161 (437)
Q Consensus 155 ~Ll~~~g 161 (437)
+|+++.+
T Consensus 268 ~Ll~~~~ 274 (276)
T 4hbd_A 268 MLYSRMN 274 (276)
T ss_dssp HHHHHCC
T ss_pred HHHhccC
Confidence 9998544
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.4e-28 Score=227.87 Aligned_cols=158 Identities=18% Similarity=0.197 Sum_probs=61.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhC
Q 013760 34 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 113 (437)
Q Consensus 34 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 113 (437)
.|.||||.|++.|+.+.++.|+++|.++. .+..|.||||.|+..|+.+++++|++.+++++.. |..|+||||+|+..
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLP-NDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCC-CTTSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHc
Confidence 34555555555555555555555544441 1233445555555555555555555554444322 44455555555555
Q ss_pred CCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCC-CHHHHH--HHcCcHHHHHHH
Q 013760 114 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGE-SPLDVA--EKLGNTELFSLL 190 (437)
Q Consensus 114 g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~-T~L~~A--~~~~~~~i~~~L 190 (437)
|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|. ||||+| +..|+.+++++|
T Consensus 81 g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp TCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred CCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 5555555555444443 4445555555555555555555555554 4455555544443 555544 344445555555
Q ss_pred HHcCCC
Q 013760 191 KEAGAA 196 (437)
Q Consensus 191 ~~~ga~ 196 (437)
+++|++
T Consensus 159 l~~~a~ 164 (239)
T 1ycs_B 159 YGVQEK 164 (239)
T ss_dssp HHHHHH
T ss_pred HHhhhc
Confidence 544443
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=4.4e-28 Score=224.48 Aligned_cols=168 Identities=21% Similarity=0.156 Sum_probs=126.2
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcC
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 80 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g 80 (437)
.||||.|++.|+ .+.++.|++++.+.. .+..|.||||.|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|
T Consensus 6 ~t~L~~a~~~~~-~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 6 QVSLPPGKRTNL-RKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAG 81 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHT
T ss_pred cccCchhhhhhh-HHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcC
Confidence 489999999999 999999999987753 4578999999999999999999999999976 778999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCC-hHHHHH--HHcCcHHHHHHhh
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGN-TALHIA--IKKGRTQIVRCLL 157 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~-TpLh~A--~~~g~~~iv~~Ll 157 (437)
+.+++++|++.+++++.. |.+|+||||+|+..|+.+++++|++.++++ +.+|.+|. ||||+| +..|+.+++++|+
T Consensus 82 ~~~~v~~Ll~~ga~~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll 159 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAA-DSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159 (239)
T ss_dssp CHHHHHHHHHHTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhccHHHHHHHH
Confidence 999999999999998754 899999999999999999999999999887 77777776 999999 7889999999999
Q ss_pred cccCCCccccccCCCCHH
Q 013760 158 SIEGIDVNSLNKAGESPL 175 (437)
Q Consensus 158 ~~~g~~~n~~n~~G~T~L 175 (437)
+ .|++++..+..+.+++
T Consensus 160 ~-~~a~~~~~~~~~~~al 176 (239)
T 1ycs_B 160 G-VQEKMGIMNKGVIYAL 176 (239)
T ss_dssp H-HHHHTTTTGGGEEEES
T ss_pred H-hhhcccccccceEEEE
Confidence 9 8999998887766654
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=9.6e-28 Score=224.41 Aligned_cols=160 Identities=21% Similarity=0.205 Sum_probs=140.1
Q ss_pred CchhhHHH---HcCCcHHHHHHHHhhCCc----------ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhh-
Q 013760 1 MDMIHFMW---QQSRVILVLKELLGEFPN----------LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIAR- 66 (437)
Q Consensus 1 ~t~Lh~A~---~~g~~~~~vk~Ll~~~~~----------~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~- 66 (437)
+||||.|+ ..|+ .++++.|++.+.+ .....|..|.||||+|+..|+.++|++|++.|+++ +..+
T Consensus 47 ~t~L~~A~~~~~~g~-~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~ 124 (260)
T 3jxi_A 47 KTCLPKALLNLSAGR-NDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQAR 124 (260)
T ss_dssp CCHHHHHHTSCBTTB-CTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCE
T ss_pred CcHHHHHHHHhhcCC-HHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-Ccccc
Confidence 58999999 7799 9999999997532 13345669999999999999999999999999987 5566
Q ss_pred -------------cCCCcHHHHHHHcCCHHHHHHHHh---CCCCCCcccCCCCCcHHHHHHhCCC---------HHHHHH
Q 013760 67 -------------NNGKTVLHSAARMGHLEVVKALVS---KDPSTGFRTDKKGQTALHMAVKGQN---------EDIVLE 121 (437)
Q Consensus 67 -------------~~G~tpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~~g~---------~~iv~~ 121 (437)
.+|.||||+|+..|+.+++++|++ .+.+++.. |.+|+||||+|+..++ .+++++
T Consensus 125 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~-d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~ 203 (260)
T 3jxi_A 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQ-DSRGNTVLHALVAIADNTRENTKFVTKMYDL 203 (260)
T ss_dssp ECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC-CTTSCCHHHHHHHHCCSSHHHHHHHHHHHHH
T ss_pred ccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCccc-CCCCCcHHHHHHHhccCchhHHHHHHHHHHH
Confidence 579999999999999999999999 88888754 9999999999998887 799999
Q ss_pred hhcCCCCcc------ccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCc
Q 013760 122 LIRPDPSVL------KLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDV 164 (437)
Q Consensus 122 Ll~~~~~~~------~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~ 164 (437)
|++.+.++. +.+|.+|+||||+|+..|+.+++++|++ +|.+.
T Consensus 204 Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~ 251 (260)
T 3jxi_A 204 LLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR-REIAD 251 (260)
T ss_dssp HHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHHHH
T ss_pred HHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHH-hCCCc
Confidence 999876642 6799999999999999999999999999 55443
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=7.8e-27 Score=201.40 Aligned_cols=145 Identities=21% Similarity=0.250 Sum_probs=115.3
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCc-HH
Q 013760 29 MTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQT-AL 107 (437)
Q Consensus 29 ~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t-~L 107 (437)
...+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+ .|+.+++++|++.+.++... |..|.| ||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~-d~~g~ttpL 82 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCA-DPATLTRPV 82 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCC-CTTTCCCHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCc-CCCCCcHHH
Confidence 356788999999999999999999999999887 678889999999985 89999999999999888754 889999 99
Q ss_pred HHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHH
Q 013760 108 HMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVA 178 (437)
Q Consensus 108 h~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A 178 (437)
|+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||.+-+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSS-CC-----------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccccC
Confidence 9999999999999999998876 8899999999999999999999999999 8999999999999997754
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=3.2e-27 Score=210.29 Aligned_cols=158 Identities=12% Similarity=0.105 Sum_probs=114.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCcccCCCCCcHHHHH
Q 013760 35 CSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHL----EVVKALVSKDPSTGFRTDKKGQTALHMA 110 (437)
Q Consensus 35 g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A 110 (437)
+.++||.|++.|+.+.++.+++.+.+. ..+..|+||||+|+.+|+. +++++|++.|++++.. |.+|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~-d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSR-TKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCC-CTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCC-CCCCCcHHHHH
Confidence 456777777777777777777766543 1235677777777777764 4777777777777654 77777777777
Q ss_pred HhCCC------HHHHHHhhcCCCCccccCCCCCC-hHHHHHHHcC-----cHHHHHHhhcccCCCccccccCCCCHHHHH
Q 013760 111 VKGQN------EDIVLELIRPDPSVLKLEDNKGN-TALHIAIKKG-----RTQIVRCLLSIEGIDVNSLNKAGESPLDVA 178 (437)
Q Consensus 111 ~~~g~------~~iv~~Ll~~~~~~~~~~d~~G~-TpLh~A~~~g-----~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A 178 (437)
+..++ .++++.|+++|+++ |.+|.+|+ ||||+|+..+ +.+++++|++..|+|++.+|..|.||||+|
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 77765 46777888777766 77788887 8888887743 346778887756788888888888888888
Q ss_pred HHcCcHHHHHHHHHcCCC
Q 013760 179 EKLGNTELFSLLKEAGAA 196 (437)
Q Consensus 179 ~~~~~~~i~~~L~~~ga~ 196 (437)
++.++.+++++|.+...+
T Consensus 162 ~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 162 KRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HTTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 888888888877766543
No 80
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=6.6e-28 Score=222.00 Aligned_cols=185 Identities=18% Similarity=0.184 Sum_probs=152.1
Q ss_pred HHHHHhhCCc--ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 013760 17 LKELLGEFPN--LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPS 94 (437)
Q Consensus 17 vk~Ll~~~~~--~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~ 94 (437)
++.|++++.+ .....+.+|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+.+++++|++.+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 4567777544 34566778899999999999999999999999987 67899999999999999999999999999999
Q ss_pred CCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCC-CCCChHHHHH--HHcCcHHHHHHhhcccCCCccccccCC
Q 013760 95 TGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLED-NKGNTALHIA--IKKGRTQIVRCLLSIEGIDVNSLNKAG 171 (437)
Q Consensus 95 ~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~G~TpLh~A--~~~g~~~iv~~Ll~~~g~~~n~~n~~G 171 (437)
++.. |..|+||||+|+..|+.+++++|++.+.++ +.+| .+|+||||+| +..|+.+++++|++ .|++++..|..|
T Consensus 80 ~n~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~-~ga~~~~~~~~~ 156 (229)
T 2vge_A 80 VNSP-DSHGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLAD-VEQSMGLMNSGA 156 (229)
T ss_dssp TTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH-HHHHTTTSGGGE
T ss_pred CCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHH-cCCCcccccCCc
Confidence 8754 899999999999999999999999999887 6665 6999999999 99999999999999 899999999999
Q ss_pred CCHHHHHHHcCcHHHHHHHHHcCCC--cccCCCCCCChH
Q 013760 172 ESPLDVAEKLGNTELFSLLKEAGAA--HSKDHGKPPSAT 208 (437)
Q Consensus 172 ~T~L~~A~~~~~~~i~~~L~~~ga~--~~~~~~~~~~~~ 208 (437)
.||++.++.... .++|++.|++ ....+..+.++.
T Consensus 157 ~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL 192 (229)
T 2vge_A 157 VYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDW 192 (229)
T ss_dssp EEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSE
T ss_pred hHHHHHHhhccc---cccCccccccccccccCCCcccHH
Confidence 999986654443 2577788887 344444454443
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=6.4e-27 Score=208.33 Aligned_cols=161 Identities=12% Similarity=0.043 Sum_probs=140.9
Q ss_pred CchhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCH----HHHHHHHhcCCchhHhhhcCCCcHHHHH
Q 013760 1 MDMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHI----DVVNFLLEIDSNLAKIARNNGKTVLHSA 76 (437)
Q Consensus 1 ~t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~~~~G~tpLh~A 76 (437)
|++||.|++.|+ ++.++.+++.+++.. .|..|.||||+|+..|+. +++++|+++|+++ +.+|.+|+||||+|
T Consensus 7 ~~~l~~Aa~~g~-~~~~~~l~~~~~~~~--~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 7 YRTVSAAAMLGT-YEDFLELFEKGYEDK--ESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp CSSHHHHHHHSC-HHHHHHHHHHSSSCH--HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred ccHHHHHHHcCC-HHHHHHHHhcCcccc--cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 689999999999 999999999876532 236899999999999985 5999999999998 77899999999999
Q ss_pred HHcCC------HHHHHHHHhCCCCCCcccCCCCC-cHHHHHHhCCC-----HHHHHHhhc-CCCCccccCCCCCChHHHH
Q 013760 77 ARMGH------LEVVKALVSKDPSTGFRTDKKGQ-TALHMAVKGQN-----EDIVLELIR-PDPSVLKLEDNKGNTALHI 143 (437)
Q Consensus 77 a~~g~------~~iv~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~g~-----~~iv~~Ll~-~~~~~~~~~d~~G~TpLh~ 143 (437)
+..|+ .+++++|+++|++++.. |..|+ ||||+|+..+. .+++++|++ .|.++ +.+|.+|+||||+
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~-d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITAL-YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWGLTALEF 160 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSC-BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCTTSCCHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCcc-CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCCCCCCHHHH
Confidence 99997 68899999999999865 99999 99999999553 568999999 78776 9999999999999
Q ss_pred HHHcCcHHHHHHhhcccCCCccccc
Q 013760 144 AIKKGRTQIVRCLLSIEGIDVNSLN 168 (437)
Q Consensus 144 A~~~g~~~iv~~Ll~~~g~~~n~~n 168 (437)
|++.|+.+++++|.+ ...+.+.++
T Consensus 161 A~~~~~~~~v~~L~~-~~~~~~~~~ 184 (186)
T 3t8k_A 161 VKRCQKPIALKMMED-YIKKYNLKE 184 (186)
T ss_dssp HHTTTCHHHHHHHHH-HHHHHTCCC
T ss_pred HHHcCCHHHHHHHHH-HHHHHhccc
Confidence 999999999999997 444555544
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=5.5e-26 Score=191.37 Aligned_cols=129 Identities=18% Similarity=0.273 Sum_probs=75.3
Q ss_pred hhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCC-CChHHH
Q 013760 64 IARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNK-GNTALH 142 (437)
Q Consensus 64 ~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~-G~TpLh 142 (437)
..|.+|.||||+|+..|+.+++++|++.+.++... |..|+||||+|+. |+.+++++|++.+.++ +.+|.+ |+||||
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGADPNAL-NRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVH 83 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHH
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCc-CCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHH
Confidence 34455555555555555555555555555554432 5555555555555 5555555555555443 555555 666666
Q ss_pred HHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 013760 143 IAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 196 (437)
Q Consensus 143 ~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~ 196 (437)
+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 84 ~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 84 DAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 6666666666666665 5666666666666666666666666666666666553
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=6.1e-26 Score=191.09 Aligned_cols=131 Identities=22% Similarity=0.273 Sum_probs=122.1
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCC-CCcH
Q 013760 28 VMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKK-GQTA 106 (437)
Q Consensus 28 ~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~-g~t~ 106 (437)
++..|.+|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+. |+.+++++|++.++++... |.. |.||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~-~~~~g~t~ 81 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCA-DPATLTRP 81 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCC-BTTTTBCH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCc-CCCCCCCH
Confidence 4578899999999999999999999999999887 6789999999999999 9999999999999998755 777 9999
Q ss_pred HHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCC
Q 013760 107 LHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID 163 (437)
Q Consensus 107 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~ 163 (437)
||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..++.+++++|++ .|+|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~-~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPVDLAEEQGHRDIARYLHA-ATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCC-CCCSSSSSCHHHHHHHHTCHHHHHHHHH-HHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 99999999999999999999886 8999999999999999999999999998 6664
No 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.5e-27 Score=235.08 Aligned_cols=154 Identities=18% Similarity=0.123 Sum_probs=128.2
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcc--cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCch--hHhhhcCCCcHHHHHH
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNL--VMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNL--AKIARNNGKTVLHSAA 77 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~--~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~--~~~~~~~G~tpLh~Aa 77 (437)
||||.|+..|+ .+++++|++.+... ....|..|.||||+||..|+.++|++|+++|++. .+..+.+ .||||+||
T Consensus 94 T~Lh~Aa~~G~-~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 94 VICFVAAITGC-SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHCC-HHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CHHHHHHHcCC-HHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 79999999999 99999999987521 2235667899999999999999999999999752 1333333 99999999
Q ss_pred HcCCHHHHHHHHhCCCCCCc-ccCCCCCcHHHHHH-hCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHH
Q 013760 78 RMGHLEVVKALVSKDPSTGF-RTDKKGQTALHMAV-KGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRC 155 (437)
Q Consensus 78 ~~g~~~iv~~Ll~~~~~~~~-~~d~~g~t~Lh~A~-~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~ 155 (437)
..|+.+++++|++++++... ..|.+|.||||+|+ .+|+.+++++|++.+. .|+||||.|+..|+.+++++
T Consensus 172 ~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~l 243 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPF 243 (376)
T ss_dssp HTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHH
T ss_pred HCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHH
Confidence 99999999999999998654 24778999999999 9999999999998652 38999999999999999999
Q ss_pred hhcccCCCccc
Q 013760 156 LLSIEGIDVNS 166 (437)
Q Consensus 156 Ll~~~g~~~n~ 166 (437)
|++ .|++++.
T Consensus 244 L~~-~ga~~~~ 253 (376)
T 2aja_A 244 IAR-HVNRLKE 253 (376)
T ss_dssp HHH-HHHHHHH
T ss_pred HHh-cCccccc
Confidence 998 5665543
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.3e-24 Score=177.76 Aligned_cols=124 Identities=42% Similarity=0.673 Sum_probs=69.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcC
Q 013760 69 GKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKG 148 (437)
Q Consensus 69 G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g 148 (437)
|.||||+|+..|+.+++++|++.+++.... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcC
Confidence 455555555555555555555555444322 445555555555555555555555554443 455555556666666656
Q ss_pred cHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 013760 149 RTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 195 (437)
Q Consensus 149 ~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga 195 (437)
+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 80 ~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 80 HLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred hHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 6666666555 455555556666666666666666666666665555
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.3e-24 Score=177.82 Aligned_cols=126 Identities=39% Similarity=0.627 Sum_probs=111.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhC
Q 013760 34 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 113 (437)
Q Consensus 34 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 113 (437)
+|.||||+|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCccc-CCCCCcHHHHHHHc
Confidence 5889999999999999999999988876 567888999999999999999999999998887654 88899999999999
Q ss_pred CCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCC
Q 013760 114 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID 163 (437)
Q Consensus 114 g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~ 163 (437)
|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|+|
T Consensus 79 ~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~Gad 126 (126)
T 1n0r_A 79 GHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE-AGAY 126 (126)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCC
T ss_pred ChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHH-cCCC
Confidence 9999999999988776 7888999999999999999999999998 6764
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=7.5e-25 Score=188.87 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=118.5
Q ss_pred hhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCCh-HHH
Q 013760 64 IARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNT-ALH 142 (437)
Q Consensus 64 ~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~T-pLh 142 (437)
..+..|.||||+|+..|+.+++++|++.+++++.. |..|+||||+|+ .|+.+++++|++.+.++ +.+|.+|+| |||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVH 83 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHH
Confidence 45678999999999999999999999999988754 899999999985 99999999999998776 899999999 999
Q ss_pred HHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCh
Q 013760 143 IAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSA 207 (437)
Q Consensus 143 ~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~~~~~~ 207 (437)
+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++....+..+.++
T Consensus 84 ~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp HHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred HHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 9999999999999999 799999999999999999999999999999999999987766555443
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=2e-24 Score=181.82 Aligned_cols=123 Identities=30% Similarity=0.405 Sum_probs=65.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcC
Q 013760 69 GKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKG 148 (437)
Q Consensus 69 G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g 148 (437)
|.||||+|+..|+.+++++|++.+++.+.. |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAK-DEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcC
Confidence 445555555555555555555555444322 445555555555555555555555554443 445555555555555555
Q ss_pred cHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcC
Q 013760 149 RTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAG 194 (437)
Q Consensus 149 ~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~g 194 (437)
+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++.|
T Consensus 92 ~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 92 HLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 5555555555 45555555555555555555555555555555543
No 89
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=4.5e-26 Score=202.05 Aligned_cols=165 Identities=23% Similarity=0.287 Sum_probs=138.1
Q ss_pred HHHcCCcHHHHHHHHhhCCcc----------cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHH
Q 013760 7 MWQQSRVILVLKELLGEFPNL----------VMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSA 76 (437)
Q Consensus 7 A~~~g~~~~~vk~Ll~~~~~~----------~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~A 76 (437)
|++.|. .+.++.|++..... ....|.+|.||||+|+..|+.++++.|++ +.++ +.+|.+|.||||+|
T Consensus 7 aa~~~~-~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A 83 (183)
T 3deo_A 7 GSRTAG-EGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFV 83 (183)
T ss_dssp EEEEET-TTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHH
T ss_pred HHHhcC-CchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHH
Confidence 444555 56666666542211 11235688999999999999999999999 7776 67899999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHh
Q 013760 77 ARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 156 (437)
Q Consensus 77 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 156 (437)
+..|+.+++++|++.+++++...+.+|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..++.
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------ 156 (183)
T 3deo_A 84 AGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------ 156 (183)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------
T ss_pred HHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------
Confidence 99999999999999999988664489999999999999999999999998876 88999999999999875432
Q ss_pred hcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHc
Q 013760 157 LSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEA 193 (437)
Q Consensus 157 l~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ 193 (437)
..+.+||++|+..|..+++++|.++
T Consensus 157 ------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 ------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp ------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 3567999999999999999999764
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=2e-24 Score=181.81 Aligned_cols=126 Identities=27% Similarity=0.340 Sum_probs=113.6
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHH
Q 013760 30 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHM 109 (437)
Q Consensus 30 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~ 109 (437)
.....|.||||+|+..|+.+++++|++.|.++ +..|.+|.||||+|+..|+.+++++|++.+++++.. |..|.||||+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~ 86 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAV-DAIGFTPLHL 86 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTCCCHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcC-CCCCCCHHHH
Confidence 34567899999999999999999999999887 678889999999999999999999999999988754 8899999999
Q ss_pred HHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhc
Q 013760 110 AVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 110 A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999999998876 8899999999999999999999999987
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1.1e-25 Score=209.20 Aligned_cols=145 Identities=25% Similarity=0.344 Sum_probs=130.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHH
Q 013760 31 TDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMA 110 (437)
Q Consensus 31 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A 110 (437)
.+.+|.||||+|+..|+.++++.|++ +.++ +.+|.+|.||||+|+..|+.+++++|++.+++++...+..|.||||+|
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 34579999999999999999999999 7776 778999999999999999999999999999999876448899999999
Q ss_pred HhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHH
Q 013760 111 VKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLL 190 (437)
Q Consensus 111 ~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L 190 (437)
+..|+.+++++|++.+.++ +.+|.+|+||||+|+..++ +..+.|||++|+..|+.+++++|
T Consensus 119 ~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 119 AGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHH
Confidence 9999999999999998886 8899999999999986321 25678999999999999999999
Q ss_pred HHcCCC
Q 013760 191 KEAGAA 196 (437)
Q Consensus 191 ~~~ga~ 196 (437)
.+++.+
T Consensus 180 ~~~~~~ 185 (244)
T 3ui2_A 180 EGQVFE 185 (244)
T ss_dssp HHHHEE
T ss_pred HHhccc
Confidence 987544
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=1.8e-24 Score=182.07 Aligned_cols=125 Identities=28% Similarity=0.390 Sum_probs=66.2
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHH
Q 013760 65 ARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIA 144 (437)
Q Consensus 65 ~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A 144 (437)
+|.+|.||||+|+..|+.+++++|++.++++.. .|..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDA 83 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHH
Confidence 344455555555555555555555555544432 2455555555555555555555555554443 45555555555555
Q ss_pred HHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHH
Q 013760 145 IKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKE 192 (437)
Q Consensus 145 ~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~ 192 (437)
+..|+.+++++|++ .|++++.+|..|.||||+|+..+..+++++|.+
T Consensus 84 ~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 84 AKNGHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 55555555555555 455555555555555555555555555544433
No 93
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=1.8e-25 Score=220.20 Aligned_cols=177 Identities=13% Similarity=0.125 Sum_probs=142.9
Q ss_pred hhhHHHH-cCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchh--HhhhcCCCcHHHHHHHc
Q 013760 3 MIHFMWQ-QSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLA--KIARNNGKTVLHSAARM 79 (437)
Q Consensus 3 ~Lh~A~~-~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~--~~~~~~G~tpLh~Aa~~ 79 (437)
+++.|.. .++ .++++++++++ .++.||||+|+..|+.++|++|++.|+... ...+..|.||||+||..
T Consensus 68 ~~~~a~~~~~~-~~~~~~l~~~g--------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 68 CLYYAHYNRNA-KQLWSDAHKKG--------IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHHHTTTTC-TTHHHHHHHHT--------CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCC-HHHHHHHHHcC--------CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc
Confidence 4555555 355 67777777654 345799999999999999999999987211 12345678999999999
Q ss_pred CCHHHHHHHHhCCCCCC--cccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCcccc--CCCCCChHHHHHH-HcCcHHHHH
Q 013760 80 GHLEVVKALVSKDPSTG--FRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKL--EDNKGNTALHIAI-KKGRTQIVR 154 (437)
Q Consensus 80 g~~~iv~~Ll~~~~~~~--~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~--~d~~G~TpLh~A~-~~g~~~iv~ 154 (437)
|+.++|++|++++++.. ...+.+ .||||+|+.+|+.+++++|++.++++ +. .|.+|+||||+|+ ..|+.++++
T Consensus 139 G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 139 GHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp TCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred CCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 99999999999997632 111223 99999999999999999999999876 44 7889999999999 999999999
Q ss_pred HhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Q 013760 155 CLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 198 (437)
Q Consensus 155 ~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~ 198 (437)
+|++ .|+ .|.|||+.|+..|+.+++++|+++|++..
T Consensus 217 ~Ll~-~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 217 FLLD-CPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHTT-SHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHH
T ss_pred HHHh-CCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 9999 553 38899999999999999999999987653
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=6.9e-24 Score=178.54 Aligned_cols=126 Identities=25% Similarity=0.284 Sum_probs=116.0
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHH
Q 013760 30 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHM 109 (437)
Q Consensus 30 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~ 109 (437)
.+|.+|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|++.+.+.... |..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT-GYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCc-CCCCCCHHHH
Confidence 47889999999999999999999999999887 678899999999999999999999999999988754 8999999999
Q ss_pred HHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhc
Q 013760 110 AVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 110 A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..+..+++++|.+
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 99999999999999998876 8999999999999999999998887766
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=8.6e-23 Score=189.51 Aligned_cols=134 Identities=25% Similarity=0.248 Sum_probs=121.3
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhh-cCCCcHHHHHHHcC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIAR-NNGKTVLHSAARMG 80 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~G~tpLh~Aa~~g 80 (437)
||||.|+..|+ .++++.|++ +.+ ++.+|..|.||||+|+..|+.++|++|+++|+++ +.++ .+|.||||+|+..|
T Consensus 47 t~L~~A~~~g~-~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 47 TPWWTAARKAD-EQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHTTTC-HHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHHTT
T ss_pred CHHHHHHHcCC-HHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcC
Confidence 79999999999 999999999 544 5678999999999999999999999999999998 4455 88999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
+.+++++|++.++++.. .|..|.||||+|+..+ .+..+.||||+|+..|+.+++++|++
T Consensus 123 ~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 123 RPEVVEALVELGADIEV-EDERGLTALELAREIL------------------KTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp CHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHcChHHHHHHHHH
Confidence 99999999999999875 4999999999998622 23568999999999999999999997
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=6.1e-23 Score=181.78 Aligned_cols=134 Identities=25% Similarity=0.231 Sum_probs=120.6
Q ss_pred chhhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhh-cCCCcHHHHHHHcC
Q 013760 2 DMIHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIAR-NNGKTVLHSAARMG 80 (437)
Q Consensus 2 t~Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~G~tpLh~Aa~~g 80 (437)
||||.|+..|+ .++++.|++ +. ..+..|.+|.||||+|+..|+.+++++|+++|+++ +.+| .+|+||||+|+..|
T Consensus 46 t~L~~A~~~g~-~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 46 TPWWTAARKAD-EQALSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHTTC-HHHHHHHTT-TS-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHHTT
T ss_pred CHHHHHHHcCC-HHHHHHHHh-cC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHhcC
Confidence 79999999999 999999999 44 45678999999999999999999999999999998 4555 88999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhc
Q 013760 81 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 158 (437)
Q Consensus 81 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 158 (437)
+.+++++|++.++++.. +|.+|+||||+|++.++. ..+.+||++|+..|+.+++++|.+
T Consensus 122 ~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 122 RPEVVEALVELGADIEV-EDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp CHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHcCCCCcC-CCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999875 499999999999974322 357899999999999999999976
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=5.9e-23 Score=169.54 Aligned_cols=110 Identities=24% Similarity=0.282 Sum_probs=76.5
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHH
Q 013760 67 NNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIK 146 (437)
Q Consensus 67 ~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~ 146 (437)
..|.||||+|+..|+.+++++|++.+++... .|..|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVY 82 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHH
Confidence 4566677777777777777777777666553 3666777777777777777777777766554 6677777777777777
Q ss_pred cCcHHHHHHhhcccCCCccccccCCCCHHHHHH
Q 013760 147 KGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAE 179 (437)
Q Consensus 147 ~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~ 179 (437)
.|+.+++++|++ .|++++.+|..|.||||+|.
T Consensus 83 ~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 83 EGHVSCVKLLLS-KGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCC
T ss_pred cCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHhC
Confidence 777777777777 57777777777777777773
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=3.3e-23 Score=198.47 Aligned_cols=145 Identities=22% Similarity=0.183 Sum_probs=123.7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHh-----hhcCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCcccCCC
Q 013760 31 TDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKI-----ARNNGKTVLHSAARM---GHLEVVKALVSKDPSTGFRTDKK 102 (437)
Q Consensus 31 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~~~~G~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~ 102 (437)
....+.++||.|+..|+.+.++.|++.|+++... .+..|.||||+|+.. |+.+++++|++.+++++.. |.+
T Consensus 147 ~~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~-d~~ 225 (301)
T 2b0o_E 147 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK-AAD 225 (301)
T ss_dssp CCC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCC-CTT
T ss_pred ccCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCC-CCC
Confidence 4556789999999999999999999999987432 588999999999997 8999999999999998754 899
Q ss_pred CCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcC
Q 013760 103 GQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLG 182 (437)
Q Consensus 103 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~ 182 (437)
|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|++ .|++ .|.||||+|+..|
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~-~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ-AQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHH-HHHH------TTSSCCC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-hcCC------CCCChhHHHHhcC
Confidence 999999999999999999999998886 8999999999999999999999999998 6766 5789999999887
Q ss_pred cH
Q 013760 183 NT 184 (437)
Q Consensus 183 ~~ 184 (437)
+.
T Consensus 298 ~~ 299 (301)
T 2b0o_E 298 IS 299 (301)
T ss_dssp --
T ss_pred Cc
Confidence 64
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.7e-23 Score=191.10 Aligned_cols=137 Identities=27% Similarity=0.328 Sum_probs=111.5
Q ss_pred HhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcC-CCCccccCCCCCChHH
Q 013760 63 KIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRP-DPSVLKLEDNKGNTAL 141 (437)
Q Consensus 63 ~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~d~~G~TpL 141 (437)
...+.+|.||||+|+..|+.+++++|++.+.+++. .|..|+||||+|+.+|+.+++++|++. +.+ ++.+|.+|+|||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL 144 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTAL 144 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHH
Confidence 34577899999999999999999999999988774 488999999999999999999999998 555 488999999999
Q ss_pred HHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcccCCC
Q 013760 142 HIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHG 202 (437)
Q Consensus 142 h~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~~~~~ 202 (437)
|+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.++++.|++.|+.....+.
T Consensus 145 ~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp HHHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 99999999999999999 7999999999999999999999999999999999988765443
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=5.1e-23 Score=187.84 Aligned_cols=139 Identities=22% Similarity=0.220 Sum_probs=113.8
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCCCCcHHH
Q 013760 30 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSK-DPSTGFRTDKKGQTALH 108 (437)
Q Consensus 30 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh 108 (437)
..|.+|.||||+|+..|+.++++.|++.|.++ +.+|.+|.||||+|+..|+.+++++|++. +.+.+. .|..|+||||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tpL~ 145 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTALH 145 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCHHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCHHH
Confidence 34667899999999999999999999999887 67899999999999999999999999999 777764 4999999999
Q ss_pred HHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCC
Q 013760 109 MAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGE 172 (437)
Q Consensus 109 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~ 172 (437)
+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..++.++++.|++ .+++.+..|.+|.
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~-~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQG-TDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC------------------
T ss_pred HHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhc-cchhhhccchhhh
Confidence 999999999999999998886 8999999999999999999999999998 7888877776653
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=5.5e-23 Score=169.69 Aligned_cols=118 Identities=22% Similarity=0.246 Sum_probs=101.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHH
Q 013760 31 TDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMA 110 (437)
Q Consensus 31 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A 110 (437)
.+..|.||||+|+..|+.+++++|++.+.++ +..|.+|.||||+|+..|+.+++++|++.+++++.. |..|+||||+|
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-d~~g~tpL~~A 80 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP-DKHHITPLLSA 80 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCC-CTTSCCHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC-CCCCCCHHHHH
Confidence 3567889999999999999999999999887 678889999999999999999999999999887754 88999999999
Q ss_pred HhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHH
Q 013760 111 VKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQ 151 (437)
Q Consensus 111 ~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~ 151 (437)
+..|+.+++++|++.+.++ +.+|.+|+||||+|...+..+
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCCHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhCCHHHHH
Confidence 9999999999999998776 889999999999995444333
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=8.8e-23 Score=195.48 Aligned_cols=129 Identities=27% Similarity=0.278 Sum_probs=119.6
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc-----cCCCCCcHHHHHHhC---CCHHHHHHhhcCCCCccccCCCCCC
Q 013760 67 NNGKTVLHSAARMGHLEVVKALVSKDPSTGFR-----TDKKGQTALHMAVKG---QNEDIVLELIRPDPSVLKLEDNKGN 138 (437)
Q Consensus 67 ~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~G~ 138 (437)
..+.++||.|+..|+.+.++.|++.+++++.. .|..|+||||+|+.. |+.+++++|++.++++ +.+|.+|+
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~ 227 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGN 227 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCC
Confidence 33567899999999999999999999998753 588999999999997 8999999999998876 89999999
Q ss_pred hHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCc
Q 013760 139 TALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 197 (437)
Q Consensus 139 TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~ 197 (437)
||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++.
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 99999999999999999999 89999999999999999999999999999999999863
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=1.6e-21 Score=184.57 Aligned_cols=127 Identities=24% Similarity=0.297 Sum_probs=118.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCCcc-----cCCCCCcHHHHHHhC---CCHHHHHHhhcCCCCccccCCCCCChHH
Q 013760 70 KTVLHSAARMGHLEVVKALVSKDPSTGFR-----TDKKGQTALHMAVKG---QNEDIVLELIRPDPSVLKLEDNKGNTAL 141 (437)
Q Consensus 70 ~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~G~TpL 141 (437)
.++|+.|+..|+.+.++.+++.+++.... .|..|+||||+|+.. |+.+++++|++.++++ +.+|.+|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHH
Confidence 47899999999999999999999986433 378899999999999 8999999999998886 89999999999
Q ss_pred HHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Q 013760 142 HIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 198 (437)
Q Consensus 142 h~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~ 198 (437)
|+|+..|+.+++++|++ .|+|++.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 210 h~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999 899999999999999999999999999999999998754
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=4.5e-21 Score=188.20 Aligned_cols=128 Identities=20% Similarity=0.280 Sum_probs=84.8
Q ss_pred hcCCCcHHHHHHHc-CCHHHHHHHHhCCCCCCcccC--CCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHH
Q 013760 66 RNNGKTVLHSAARM-GHLEVVKALVSKDPSTGFRTD--KKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALH 142 (437)
Q Consensus 66 ~~~G~tpLh~Aa~~-g~~~iv~~Ll~~~~~~~~~~d--~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh 142 (437)
+..+.||||.|+.. |+.++++.|++.+++++.. | ..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh 273 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWV-NGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLH 273 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCcc-ccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence 33455667777766 6777777777666666543 4 56667777777777777777777666554 666666777777
Q ss_pred HHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 013760 143 IAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 196 (437)
Q Consensus 143 ~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~ 196 (437)
+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+.++..
T Consensus 274 ~A~~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 274 HATILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 7777777777777776 5667777777777777777777777777766666543
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=1.2e-20 Score=193.18 Aligned_cols=126 Identities=28% Similarity=0.288 Sum_probs=64.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCcc-----cCCCCCcHHHHHHh---CCCHHHHHHhhcCCCCccccCCCCCChHHH
Q 013760 71 TVLHSAARMGHLEVVKALVSKDPSTGFR-----TDKKGQTALHMAVK---GQNEDIVLELIRPDPSVLKLEDNKGNTALH 142 (437)
Q Consensus 71 tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~t~Lh~A~~---~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh 142 (437)
+.||.|+..|+.+.++.|++.+++++.. .|..|.||||+|+. .|+.+++++|++.|+++ |.+|.+|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHH
Confidence 3455555555555555555555544321 14445555555533 55555555555555443 555555555555
Q ss_pred HHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Q 013760 143 IAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 198 (437)
Q Consensus 143 ~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~~~~i~~~L~~~ga~~~ 198 (437)
+|+..|+.+++++|++ .|+|+|.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 213 ~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 5555555555555555 455555555555555555555555555555555555543
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.1e-20 Score=176.84 Aligned_cols=130 Identities=22% Similarity=0.212 Sum_probs=105.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCchh-----HhhhcCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCcccCCC
Q 013760 31 TDLSCSTALHTAAAQGHIDVVNFLLEIDSNLA-----KIARNNGKTVLHSAARM---GHLEVVKALVSKDPSTGFRTDKK 102 (437)
Q Consensus 31 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~-----~~~~~~G~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~ 102 (437)
.+....++|+.|+..|+.+.++.+++.|.+.. +..|..|.||||+|+.. |+.+++++|++.+++++.. |.+
T Consensus 126 ~~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~-d~~ 204 (278)
T 1dcq_A 126 DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQ-TGK 204 (278)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCC-CTT
T ss_pred ccchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcccc-CCC
Confidence 34455678888888888888888888887753 23367888888888888 7888888888888887654 888
Q ss_pred CCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCC
Q 013760 103 GQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID 163 (437)
Q Consensus 103 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~ 163 (437)
|+||||+|+..|+.+++++|++.|+++ +.+|.+|+||||+|+..|+.+++++|++ .|++
T Consensus 205 g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~ 263 (278)
T 1dcq_A 205 GSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQ-ALSG 263 (278)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 888888888888888888888888776 8888888888888888888888888888 5554
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.3e-20 Score=145.10 Aligned_cols=91 Identities=38% Similarity=0.660 Sum_probs=47.1
Q ss_pred CCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHHcC
Q 013760 103 GQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLG 182 (437)
Q Consensus 103 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~~~ 182 (437)
|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcC
Confidence 445555555555555555555544443 4455555555555555555555555555 45555555555555555555555
Q ss_pred cHHHHHHHHHcCC
Q 013760 183 NTELFSLLKEAGA 195 (437)
Q Consensus 183 ~~~i~~~L~~~ga 195 (437)
+.+++++|+++|+
T Consensus 80 ~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 5555555555554
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=3.9e-20 Score=144.69 Aligned_cols=90 Identities=41% Similarity=0.632 Sum_probs=42.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCC
Q 013760 35 CSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQ 114 (437)
Q Consensus 35 g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 114 (437)
|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+.+++++|++.++++... |.+|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcC
Confidence 444555555555555555555544443 334444445555555555555555444444444322 444444444444444
Q ss_pred CHHHHHHhhcCC
Q 013760 115 NEDIVLELIRPD 126 (437)
Q Consensus 115 ~~~iv~~Ll~~~ 126 (437)
+.+++++|++.|
T Consensus 80 ~~~~~~~Ll~~g 91 (93)
T 1n0q_A 80 HLEVVKLLLEAG 91 (93)
T ss_dssp CHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 444444444443
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=3.5e-20 Score=189.74 Aligned_cols=139 Identities=22% Similarity=0.205 Sum_probs=116.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhh------hcCCCcHHHHHHH---cCCHHHHHHHHhCCCCCCcccCCC
Q 013760 32 DLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIA------RNNGKTVLHSAAR---MGHLEVVKALVSKDPSTGFRTDKK 102 (437)
Q Consensus 32 d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~------~~~G~tpLh~Aa~---~g~~~iv~~Ll~~~~~~~~~~d~~ 102 (437)
.....+.||.|+..|+.+.|+.|++.|+++ +.. |.+|.||||+|+. .|+.+++++|++.|++++.. |.+
T Consensus 129 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~-d~~ 206 (497)
T 3lvq_E 129 CTPEPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK-AAD 206 (497)
T ss_dssp CC-CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCC-CSS
T ss_pred ccccHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCcc-CCC
Confidence 344558999999999999999999999887 434 7789999999966 99999999999999998755 999
Q ss_pred CCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccCCCccccccCCCCHHHHHHH
Q 013760 103 GQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEK 180 (437)
Q Consensus 103 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~L~~A~~ 180 (437)
|+||||+|+.+|+.+++++|++.|+++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.. |+|.+..
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~-~ga~~~~~------~~h~~~~ 276 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ-AQAGTFAF------PLHVDYS 276 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHH-TCC------------------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-hCCCCCCC------cceeecc
Confidence 999999999999999999999999886 8999999999999999999999999999 89999884 5555543
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=2.2e-20 Score=152.00 Aligned_cols=108 Identities=36% Similarity=0.502 Sum_probs=80.9
Q ss_pred hhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHH
Q 013760 64 IARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHI 143 (437)
Q Consensus 64 ~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~ 143 (437)
.+|.+|.||||+|+..|+.+++++|++.+++... .|..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 3566777777777777777777777777777654 3777778888888777788888777777665 6777788888888
Q ss_pred HHHcCcHHHHHHhhcccCCCccccccCCCCH
Q 013760 144 AIKKGRTQIVRCLLSIEGIDVNSLNKAGESP 174 (437)
Q Consensus 144 A~~~g~~~iv~~Ll~~~g~~~n~~n~~G~T~ 174 (437)
|+..++.+++++|++ .|+++|.++..|.||
T Consensus 82 A~~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDA-KGADVNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHT-TSSSHHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHH-cCCCCCcCCcccccc
Confidence 888888888888887 778888888877776
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=6.2e-20 Score=180.08 Aligned_cols=146 Identities=17% Similarity=0.222 Sum_probs=115.4
Q ss_pred CCCCcHHHHHHHc-CCHHHHHHHHhcCCchhHhhh--cCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHH
Q 013760 33 LSCSTALHTAAAQ-GHIDVVNFLLEIDSNLAKIAR--NNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHM 109 (437)
Q Consensus 33 ~~g~TpLh~Aa~~-g~~~iv~~Ll~~~~~~~~~~~--~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~ 109 (437)
..+.||||.|+.. |+.++++.|++.|+++ +..+ .+|.||||+|+..|+.+++++|++++++++. .|..|+||||+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh~ 274 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLHH 274 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHH
Confidence 3456899999999 9999999999999998 5566 7899999999999999999999999999875 49999999999
Q ss_pred HHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhccc--CCCccccccCCCCHHHHHHHc
Q 013760 110 AVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE--GIDVNSLNKAGESPLDVAEKL 181 (437)
Q Consensus 110 A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~--g~~~n~~n~~G~T~L~~A~~~ 181 (437)
|+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|+... +.+....+..+.|+++++...
T Consensus 275 A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999887 899999999999999999999999999732 234456667788888887643
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=5.1e-20 Score=149.82 Aligned_cols=108 Identities=31% Similarity=0.393 Sum_probs=99.2
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHH
Q 013760 30 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHM 109 (437)
Q Consensus 30 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~ 109 (437)
.+|.+|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..|+.+++++|++.+++.... |..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNAR-SKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCC-CTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccc-CCCCCCHHHH
Confidence 46889999999999999999999999999887 678899999999999999999999999999998754 8999999999
Q ss_pred HHhCCCHHHHHHhhcCCCCccccCCCCCChH
Q 013760 110 AVKGQNEDIVLELIRPDPSVLKLEDNKGNTA 140 (437)
Q Consensus 110 A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~Tp 140 (437)
|+..|+.+++++|++.++++ +.++..|.||
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADV-NARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSH-HHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCCCC-CcCCcccccc
Confidence 99999999999999999887 8899999987
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.2e-17 Score=134.83 Aligned_cols=93 Identities=34% Similarity=0.417 Sum_probs=57.1
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHH
Q 013760 28 VMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTAL 107 (437)
Q Consensus 28 ~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L 107 (437)
....|.+|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+.+++++|++.+++... .|..|.|||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl 94 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKTAF 94 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCCcHH
Confidence 3445666666666666666666666666666655 45566666666666666666666666666666543 366666666
Q ss_pred HHHHhCCCHHHHHHh
Q 013760 108 HMAVKGQNEDIVLEL 122 (437)
Q Consensus 108 h~A~~~g~~~iv~~L 122 (437)
|+|+..|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 666666666666554
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=3.3e-17 Score=132.27 Aligned_cols=89 Identities=27% Similarity=0.420 Sum_probs=42.7
Q ss_pred hhcCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHHHHHHhhcCCCCccccCCCCCChHHHHH
Q 013760 65 ARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIA 144 (437)
Q Consensus 65 ~~~~G~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~G~TpLh~A 144 (437)
.|.+|.||||+|+..|+.+++++|++.+++.+.. |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAK-DKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDIS 97 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHH
Confidence 3444555555555555555555555554444322 444555555555555555555555444433 44444455555555
Q ss_pred HHcCcHHHHHH
Q 013760 145 IKKGRTQIVRC 155 (437)
Q Consensus 145 ~~~g~~~iv~~ 155 (437)
+..|+.+++++
T Consensus 98 ~~~~~~~~~~~ 108 (110)
T 2zgd_A 98 IDNGNEDLAEI 108 (110)
T ss_dssp HHHTCHHHHHH
T ss_pred HHcCCHHHHHH
Confidence 55555444444
No 115
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=64.00 E-value=4.6 Score=25.58 Aligned_cols=29 Identities=31% Similarity=0.489 Sum_probs=19.3
Q ss_pred CcchHHHHHHHHhhHHHHHhhhhhhheee
Q 013760 366 HSRWLAVSATVIGGTIMLTTIGSMCYCVI 394 (437)
Q Consensus 366 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 394 (437)
.+...+|..-++++++.+.++....++++
T Consensus 6 ~s~~~aIA~gVVgGv~~v~ii~~~~~~~~ 34 (44)
T 2l2t_A 6 HARTPLIAAGVIGGLFILVIVGLTFAVYV 34 (44)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEeehHHHHHHHHHHHHHHHHh
Confidence 34556788888887777766665555554
No 116
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=53.90 E-value=10 Score=27.42 Aligned_cols=30 Identities=13% Similarity=0.305 Sum_probs=20.3
Q ss_pred chHHHHHHHHhhHHHHHhhhhhhheeehhh
Q 013760 368 RWLAVSATVIGGTIMLTTIGSMCYCVILHR 397 (437)
Q Consensus 368 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 397 (437)
...+|+..+++++++++++..+++.++...
T Consensus 9 n~~~Iv~gvi~gilliGllllliwk~~~~i 38 (79)
T 2knc_B 9 DILVVLLSVMGAILLIGLAALLIWKLLITI 38 (79)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677778888888888777666554443
No 117
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=51.95 E-value=4.6 Score=25.61 Aligned_cols=28 Identities=7% Similarity=0.199 Sum_probs=17.5
Q ss_pred cchHHHHHHHHhhHHHHHhhhhhhheee
Q 013760 367 SRWLAVSATVIGGTIMLTTIGSMCYCVI 394 (437)
Q Consensus 367 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 394 (437)
+...+|...++++++++.++....++++
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~ 35 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFM 35 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHh
Confidence 3345677777777766666665555554
No 118
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=30.57 E-value=34 Score=21.53 Aligned_cols=27 Identities=19% Similarity=0.411 Sum_probs=12.1
Q ss_pred cchHHHHHHHHhhHHHHHhhhhhhheee
Q 013760 367 SRWLAVSATVIGGTIMLTTIGSMCYCVI 394 (437)
Q Consensus 367 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 394 (437)
++-.+|...++| ++++.+++...++++
T Consensus 9 ~~~~~Ia~~vVG-vll~vi~~l~~~~~~ 35 (44)
T 2jwa_A 9 SPLTSIISAVVG-ILLVVVLGVVFGILI 35 (44)
T ss_dssp CSHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CcccchHHHHHH-HHHHHHHHHHHHhhe
Confidence 334456666666 333333333333333
No 119
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=24.21 E-value=75 Score=29.54 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhee
Q 013760 339 VINKLMWLACLFISIAFISLTYVV 362 (437)
Q Consensus 339 ~~~~~~~~~~~~~~~af~~~~~~v 362 (437)
....+..++.+|+..+|++|+|=+
T Consensus 278 ~mk~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 278 IMKILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Confidence 344566788899999999999844
No 120
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=24.20 E-value=88 Score=26.42 Aligned_cols=15 Identities=20% Similarity=0.572 Sum_probs=7.5
Q ss_pred ehhhhhHHHHHHHHH
Q 013760 303 IFFVFDSLALFISLA 317 (437)
Q Consensus 303 ~F~~~~~~a~~~S~~ 317 (437)
+|.++-.+++.+++.
T Consensus 4 ~F~~~a~~~i~~al~ 18 (184)
T 3rko_J 4 AFYICGLIAILATLR 18 (184)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 355555555555543
No 121
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=24.03 E-value=44 Score=20.27 Aligned_cols=23 Identities=9% Similarity=0.043 Sum_probs=11.0
Q ss_pred HHHHHHHhhHHHHHhhhhhhhee
Q 013760 371 AVSATVIGGTIMLTTIGSMCYCV 393 (437)
Q Consensus 371 ~~~v~~~~~~~~~~~~~~~~~~~ 393 (437)
+|.-+++|+++-+.++..+.+++
T Consensus 12 aIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeehHHHHHHHHHHHHHHHH
Confidence 44445555544444444444443
No 122
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=23.23 E-value=54 Score=19.84 Aligned_cols=18 Identities=22% Similarity=0.401 Sum_probs=13.1
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 013760 38 ALHTAAAQGHIDVVNFLL 55 (437)
Q Consensus 38 pLh~Aa~~g~~~iv~~Ll 55 (437)
-+..||+.|+.+.++.|=
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 356788888888887763
No 123
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=23.21 E-value=76 Score=29.87 Aligned_cols=24 Identities=29% Similarity=0.564 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhee
Q 013760 339 VINKLMWLACLFISIAFISLTYVV 362 (437)
Q Consensus 339 ~~~~~~~~~~~~~~~af~~~~~~v 362 (437)
....+..++.+|+..+|++|+|=+
T Consensus 302 imk~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 302 VMKVLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcc
Confidence 445667789999999999999843
No 124
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=22.88 E-value=89 Score=20.57 Aligned_cols=22 Identities=9% Similarity=0.137 Sum_probs=14.3
Q ss_pred cchHHHHHHHHhhHHHHHhhhh
Q 013760 367 SRWLAVSATVIGGTIMLTTIGS 388 (437)
Q Consensus 367 ~~~~~~~v~~~~~~~~~~~~~~ 388 (437)
..|..|.+.++++..++.++..
T Consensus 7 vp~WiIi~svl~GLLLL~Lii~ 28 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLIL 28 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHH
Confidence 4556777777777766665543
No 125
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=22.29 E-value=3.4e+02 Score=22.56 Aligned_cols=131 Identities=11% Similarity=0.088 Sum_probs=79.5
Q ss_pred hhHHHHcCCcHHHHHHHHhhCCcccccCCCCCCcHH-HHHHHcCCHHHHHHHHhcCCchhHhhhcCCCcHHHHHHHcCCH
Q 013760 4 IHFMWQQSRVILVLKELLGEFPNLVMTTDLSCSTAL-HTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHL 82 (437)
Q Consensus 4 Lh~A~~~g~~~~~vk~Ll~~~~~~~~~~d~~g~TpL-h~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~G~tpLh~Aa~~g~~ 82 (437)
+-.|...|+ ++....+.+.-. +..-+.-| ..|...|+.++++....+-.+.. ..+.+....|+.
T Consensus 12 F~LAL~lg~-l~~A~e~a~~l~------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~--------~L~~Ly~~tg~~ 76 (177)
T 3mkq_B 12 FDLALEYGN-LDAALDEAKKLN------DSITWERLIQEALAQGNASLAEMIYQTQHSFD--------KLSFLYLVTGDV 76 (177)
T ss_dssp HHHHHHTTC-HHHHHHHHHHHC------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH--------HHHHHHHHHTCH
T ss_pred HHHHHhcCC-HHHHHHHHHHhC------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH--------HHHHHHHHhCCH
Confidence 567999999 999888876521 11223333 56777899999999888766652 234555556776
Q ss_pred HHHHHHHhCCCCCCcccCCCCCcHHHHHHhCCCHH-HHHHhhcCCCCccccCCCCCChHHHHHHHcCcHHHHHHhhcccC
Q 013760 83 EVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNED-IVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEG 161 (437)
Q Consensus 83 ~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~-iv~~Ll~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 161 (437)
+-++.+-+... ...+-..+.+.+-..|+.+ +++.|.+.+.-. . +.-.|-.+|..++.+-+++..|
T Consensus 77 e~L~kla~iA~-----~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~-e--------A~~~A~t~g~~~~a~~~~~~~~ 142 (177)
T 3mkq_B 77 NKLSKMQNIAQ-----TREDFGSMLLNTFYNNSTKERSSIFAEGGSLP-L--------AYAVAKANGDEAAASAFLEQAE 142 (177)
T ss_dssp HHHHHHHHHHH-----HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH-H--------HHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-----HCccHHHHHHHHHHcCCHHHHHHHHHHCCChH-H--------HHHHHHHcCcHHHHHHHHHHhC
Confidence 66666543311 1222335566666666664 555555544321 1 4566677777787777776555
Q ss_pred CC
Q 013760 162 ID 163 (437)
Q Consensus 162 ~~ 163 (437)
.+
T Consensus 143 ~~ 144 (177)
T 3mkq_B 143 VD 144 (177)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 126
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=21.64 E-value=99 Score=20.36 Aligned_cols=22 Identities=27% Similarity=0.282 Sum_probs=13.8
Q ss_pred cchHHHHHHHHhhHHHHHhhhh
Q 013760 367 SRWLAVSATVIGGTIMLTTIGS 388 (437)
Q Consensus 367 ~~~~~~~v~~~~~~~~~~~~~~ 388 (437)
..|..|.+.++++..++.++..
T Consensus 10 vp~wiIi~svl~GLllL~li~~ 31 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVL 31 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 4555667777777666655543
Done!