Citrus Sinensis ID: 013761

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------
Protein Sequence
MTATSTTVTPNPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVTKASSSGSGNKEKAGKRSTNTKKSNTNTNPDALTQQQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQVFP
Secondary Structure (PSIPRED)
ccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccHHccccccccEEEEEcccccHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHccHHHHccccccccccccccEEEEEEccccccEEEEEccccEEEEEEEEccccEEEEEEEccccccccccccccEEEEEEEccEEEEEEEEEcccccccccEEEEEEEcccccEEEEEEEccccccccccccccccccEEEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccccEccccccHHHHHHHHHHHHccccccccccccccccccccccccEEEEEcccccccccccccccccccHHHcccccccHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHEEccccccccccccccccEEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHEHccccccEEEEEccccccHHHHHHHcccEEEEEcccccccccccHHccHHHHHHHHHHHHHcccEEEEEEEccccccEEEEcccccHHHHccccccccEEEcccccccccccccccccccccccEEEEEEEEccccEEEEEEccccccccccccccEEEEEEEccccEEEEEEEEcccccccccEEEEccccccccEEEEEEcHHcccccccccccccHHHHEEEEEEEcccccccc
Coil and Loop (DISEMBL)
mtatsttvtpnpklssaysyshyfqnhsspkwtlemnackwhhcrrgqmivtkasssgsgnkekagkrstntkksntntnpdaLTQQQQqqqqqpvsislddvnpvglgrksrQIFDEVWRKFsglgqisrttraddkdSLDALLIregpmcefaipgaqntTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIvlgdvgdpctLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFksadslngwevrqgtyfQDVVAFKydagmdakfelsetgdavfsgyvFTRGGYVELSkklslplgctldrYEGLVLSVGGNGRSYVLILEagpsadrsqskLYFARFStkvgfcrvrvpfssfrpvkpddppmdpflvhtmtirfeprrqvfp
Flexible Loop (DISEMBL)
mtatsttvtpnpklssAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIvtkasssgsgnkekagkrstntkksntnTNPDALTQQQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVWRKfsglgqisrttraddkdSLDALLIREGPMCefaipgaqnttvlVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFksadslngwevrQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEagpsadrsqSKLYFARFSTKVGFCRVRVPfssfrpvkpddppmdPFLVHTmtirfeprrqvfp
Low Complexity Region (SEG)
MTATSTTVTPNPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVTKASSSGSGNKEKAGKRstntkksntntnPDALTqqqqqqqqqPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQlragkssksklllakfksadslNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQVFP
Disordered region (IsUnstruct)
*****************YSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIV************************************************************SRQIFDEVWRKFSGLGQISRTT*****DSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLR*******KLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGP*****QSKLYFARFSTKVGFCRVRVPFSSFR***********FLVHTMTIR*********
Disordered Region (DISOPRED)
**********NPKLSSAYSYSHYFQNHSSPKWTL**********************************************************************PVGLGRKSRQIFDEVWRKFS***************************************VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPR*****
Disordered Region (DISEMBL)
**********NPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVT************************TNTNP***************SISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQVFP
Disordered Region (DISPRO)
*******VTPNPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVTK********************************************ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTATSTTVTPNPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVTKASSSGSGNKEKAGKRSTNTKKSNTNTNPDALTQQQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQVFP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	437	2.2.26 [Sep-21-2011]
P48279	321	Uncharacterized protein y	N/A	no	0.201	0.274	0.303	0.0001
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.173	0.211	0.337	0.0004

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
           ++LV+GAT  +GR ++R  +  GY V+ LVR   ++   +     +++ GD+  P +L  
Sbjct: 2   SILVIGATGTLGRQIVRSALDEGYQVRCLVRNL-RKAAFLKEWGAKLIWGDLSQPESLLP 60

Query: 223 AVENCNKIIYCATARSTITGDLFRVDYQG 251
           A+     II  +T+R T    +++VD +G
Sbjct: 61  ALTGIRVIIDTSTSRPTDPAGVYQVDLKG 89

Cyanophora paradoxa (taxid: 2762)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score = 46.2 bits (108), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-----QEVVDMLPRSVEIVL--G 212
           Q  TV V GA+  IG  +I +L+ RGY+V+A VR  D     Q ++D+      + L   
Sbjct: 21  QGETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKA 80

Query: 213 DVGDPCTLKAAVENCNKIIYCAT 235
           D+ +  +  AAV+ C  + + AT
Sbjct: 81  DLHEEGSFDAAVDGCTGVFHIAT 103

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	437
118488185	584	unknown [Populus trichocarpa]	0.949	0.710	0.748	0.0
224122776	514	predicted protein [Populus trichocarpa]	0.791	0.673	0.885	0.0
449446109	610	PREDICTED: uncharacterized protein LOC10	0.778	0.557	0.876	1e-178
357467651	512	hypothetical protein MTR_4g005070 [Medic	0.972	0.830	0.726	1e-177
356526356	579	PREDICTED: uncharacterized protein LOC10	0.778	0.587	0.876	1e-177
255544456	565	dihydroflavonal-4-reductase, putative [R	0.784	0.607	0.878	1e-177
357467649	589	hypothetical protein MTR_4g005070 [Medic	0.972	0.721	0.726	1e-177
359483230	655	PREDICTED: uncharacterized protein LOC10	0.910	0.607	0.777	1e-176
225443490	607	PREDICTED: uncharacterized protein LOC10	0.910	0.655	0.777	1e-176
297735670	498	unnamed protein product [Vitis vinifera]	0.762	0.668	0.893	1e-175

>gi|118488185|gb|ABK95912.1| unknown [Populus trichocarpa]

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/434 (74%), Positives = 368/434 (84%), Gaps = 19/434 (4%)

Query: 3   ATSTTVTPNPKLSSAYSYSHYFQ--NHSSPKWTLEMNACKWHHCRRGQMIVTKASSSGSG 60
           A S +VTP    S++ + S++F   +H     +L ++  K  H ++  ++V +A      
Sbjct: 5   AASASVTPTTNASASLTNSNHFNFTSHRKIYTSLPISTVKNSH-KKSTLVVVRAIK---- 59

Query: 61  NKEKAGKRSTNTKKSNTNTNPDALTQQQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVW 120
           ++++    + N K+ N          ++   +QQP  ++L+DVNPVGLGRKSRQIFDEVW
Sbjct: 60  DRKETETETENMKEHN----------KESTTKQQP--LNLEDVNPVGLGRKSRQIFDEVW 107

Query: 121 RKFSGLGQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRK 180
           RKFSGLGQISRTTRADDK++LDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIV+RK
Sbjct: 108 RKFSGLGQISRTTRADDKEALDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRK 167

Query: 181 LMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI 240
           LMLRGY+VKALVRKAD+EVV+MLPRSVEI++GDVGDP TLKAAV  CNKIIYCATARS+I
Sbjct: 168 LMLRGYTVKALVRKADEEVVNMLPRSVEIMIGDVGDPSTLKAAVVGCNKIIYCATARSSI 227

Query: 241 TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY 300
           TGDLFRVD+QGV N+TKA QD+NNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY
Sbjct: 228 TGDLFRVDHQGVSNLTKALQDYNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY 287

Query: 301 FQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVL 360
           FQD VA KYDAGMDAKFE +E GDAVFSGYVFTRGGYVELSKKLSLPLG TLDRYEGLVL
Sbjct: 288 FQDAVASKYDAGMDAKFEFTEAGDAVFSGYVFTRGGYVELSKKLSLPLGYTLDRYEGLVL 347

Query: 361 SVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPF 420
           SVGGNGRSYVLILEAGPSAD +QSKLYFAR STKVGFCRVRVPFS+FRPVKPDD P+DPF
Sbjct: 348 SVGGNGRSYVLILEAGPSADTTQSKLYFARISTKVGFCRVRVPFSAFRPVKPDDLPLDPF 407

Query: 421 LVHTMTIRFEPRRQ 434
           LVHTMTIRFEPRRQ
Sbjct: 408 LVHTMTIRFEPRRQ 421

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122776|ref|XP_002330476.1| predicted protein [Populus trichocarpa] gi|222871888|gb|EEF09019.1| predicted protein [Populus trichocarpa]

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/348 (88%), Positives = 330/348 (94%), Gaps = 2/348 (0%)

Query: 87  QQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLI 146
           ++   +QQP  ++L+DVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDK++LDALLI
Sbjct: 6   KESTTKQQP--LNLEDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKEALDALLI 63

Query: 147 REGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRS 206
           REGPMCEFAIPGAQNTTVLVVGATSRIGRIV+RKLMLRGY+VKALVRKAD+EVV+MLPRS
Sbjct: 64  REGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKADEEVVNMLPRS 123

Query: 207 VEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKL 266
           VEI++GDVGDP TLKAAV  CNKIIYCATARS+ITGDLFRVD+QGV N+TKA QD+NNKL
Sbjct: 124 VEIMIGDVGDPSTLKAAVVGCNKIIYCATARSSITGDLFRVDHQGVSNLTKALQDYNNKL 183

Query: 267 AQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAV 326
           AQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQD VA KYDAGMDAKFE +E GDAV
Sbjct: 184 AQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDAVASKYDAGMDAKFEFTEAGDAV 243

Query: 327 FSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKL 386
           FSGYVFTRGGYVELSKKLSLPLG TLDRYEGLVLSVGGNGRSYVLILEAGPSAD +QSKL
Sbjct: 244 FSGYVFTRGGYVELSKKLSLPLGYTLDRYEGLVLSVGGNGRSYVLILEAGPSADTTQSKL 303

Query: 387 YFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
           YFAR STKVGFCRVRVPFS+FRPVKPDD P+DPFLVHTMTIRFEPRRQ
Sbjct: 304 YFARISTKVGFCRVRVPFSAFRPVKPDDLPLDPFLVHTMTIRFEPRRQ 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446109|ref|XP_004140814.1| PREDICTED: uncharacterized protein LOC101205259 [Cucumis sativus] gi|449501748|ref|XP_004161448.1| PREDICTED: uncharacterized LOC101205259 [Cucumis sativus]

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 299/341 (87%), Positives = 324/341 (95%), Gaps = 1/341 (0%)

Query: 94  QPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCE 153
           QP  I+LDDVNPVGLGRKSRQ+FDEVWRKFSGLGQISRTTR DDK++LDALLIREGPMCE
Sbjct: 106 QP-KITLDDVNPVGLGRKSRQLFDEVWRKFSGLGQISRTTRMDDKETLDALLIREGPMCE 164

Query: 154 FAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGD 213
           FAIPGAQNTTVLVVGATSRIGRIV+RKLMLRGYSVKALVRKAD++VVD+LPRSVEIV+GD
Sbjct: 165 FAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYSVKALVRKADEDVVDVLPRSVEIVIGD 224

Query: 214 VGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK 273
           VGD  +L+AAVE CNKIIYCATARSTIT DLFRVD+QGVYN+TKAFQD+NNKLAQLRAGK
Sbjct: 225 VGDANSLQAAVEGCNKIIYCATARSTITADLFRVDHQGVYNITKAFQDYNNKLAQLRAGK 284

Query: 274 SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFT 333
           SSKSKLLLAKFKS +SL GWEVRQGTYFQDVVA KYD GMDAKFE +ETG+A+FSGYVFT
Sbjct: 285 SSKSKLLLAKFKSEESLKGWEVRQGTYFQDVVAAKYDGGMDAKFEYTETGEALFSGYVFT 344

Query: 334 RGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFST 393
           RGGYVELS KLS PLG TLDRYEG++LSVGGNGRSYVLILEAGPSAD +QSKLYF+RFST
Sbjct: 345 RGGYVELSTKLSFPLGSTLDRYEGIILSVGGNGRSYVLILEAGPSADTTQSKLYFSRFST 404

Query: 394 KVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
           K GFCRVR+PFSSFRPVKPDDPP+DPFLVHT+TIRFEPRRQ
Sbjct: 405 KAGFCRVRIPFSSFRPVKPDDPPLDPFLVHTLTIRFEPRRQ 445

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467651|ref|XP_003604110.1| hypothetical protein MTR_4g005070 [Medicago truncatula] gi|355505165|gb|AES86307.1| hypothetical protein MTR_4g005070 [Medicago truncatula]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/428 (72%), Positives = 350/428 (81%), Gaps = 3/428 (0%)

Query: 7   TVTPNPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVTKASSSGSGNKEKAG 66
           + +P+    +A  YS Y   +++   + ++N     + ++     T++SS        A 
Sbjct: 2   STSPSATTIAAAVYSKYNNINTTLSVSGQINTTFLSYTKKQH---TRSSSVQRLPPIAAA 58

Query: 67  KRSTNTKKSNTNTNPDALTQQQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGL 126
             + + K S +NT  +          +Q VS+SLDDVNPVGLGRKSRQIFDEVWRKFSGL
Sbjct: 59  PNTRDGKDSKSNTQNNNNDDDDDNDDKQSVSLSLDDVNPVGLGRKSRQIFDEVWRKFSGL 118

Query: 127 GQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGY 186
           GQISRT R DD ++LDALL+REGPMCEFAIPGAQNTTVLVVGATSRIGRIV+RKLMLRGY
Sbjct: 119 GQISRTIRTDDVEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGY 178

Query: 187 SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFR 246
           SVKALVRKAD+EVV++LPRSVEIV+GDVGDP T+KAAVE CNKIIYCATARSTITGDLFR
Sbjct: 179 SVKALVRKADEEVVELLPRSVEIVIGDVGDPNTVKAAVEGCNKIIYCATARSTITGDLFR 238

Query: 247 VDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVA 306
           VD QGVYN++KAFQD NN+LAQLRAGKSSKSKL +AKFKS  SL+GWEVRQGTYF+DVV 
Sbjct: 239 VDQQGVYNLSKAFQDHNNQLAQLRAGKSSKSKLTIAKFKSESSLDGWEVRQGTYFEDVVT 298

Query: 307 FKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNG 366
            KYD GMDAKFE +E G AVFSGYVF RGGYVELSKKLSLPLG TLDRYEGLVLSVGGNG
Sbjct: 299 SKYDGGMDAKFEFTENGAAVFSGYVFNRGGYVELSKKLSLPLGSTLDRYEGLVLSVGGNG 358

Query: 367 RSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMT 426
           R YVLILEAGPS D SQSKLYFAR STKVGFCRVRVPFSSFRPVKPD P +DPFLVHT+T
Sbjct: 359 RPYVLILEAGPSGDPSQSKLYFARISTKVGFCRVRVPFSSFRPVKPDHPVLDPFLVHTLT 418

Query: 427 IRFEPRRQ 434
           IRFEPRRQ
Sbjct: 419 IRFEPRRQ 426

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526356|ref|XP_003531784.1| PREDICTED: uncharacterized protein LOC100779812 [Glycine max]

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 298/340 (87%), Positives = 324/340 (95%)

Query: 95  PVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEF 154
           PVS+SLDDVNPVGLGR+SRQ+FDEVWRKFSGLGQISRT R+DD+++LDALL+REGPMCEF
Sbjct: 77  PVSLSLDDVNPVGLGRRSRQLFDEVWRKFSGLGQISRTIRSDDQEALDALLVREGPMCEF 136

Query: 155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDV 214
           AIPGAQNTTVLVVGATSRIGRIV+RKLMLRGY+VKALVR+ADQEV+++LPRSVEIV+GDV
Sbjct: 137 AIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYAVKALVRRADQEVLELLPRSVEIVIGDV 196

Query: 215 GDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKS 274
           GDP T+KAAVE CNKIIYCATARS ITGDLFRVD++GVYN+TKAFQD +NKLAQ RAGKS
Sbjct: 197 GDPATVKAAVEGCNKIIYCATARSAITGDLFRVDHRGVYNLTKAFQDHSNKLAQSRAGKS 256

Query: 275 SKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTR 334
           SKSKL +AKFKSA SLNGWEVRQGTYFQDVVA KYD GMDAKF+ +ETGDAVFSGYVF R
Sbjct: 257 SKSKLSIAKFKSASSLNGWEVRQGTYFQDVVATKYDGGMDAKFDFTETGDAVFSGYVFNR 316

Query: 335 GGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTK 394
           GGYVELSKKLSLPLG TLDRYEGLVLSVGGNGRSYVLILEAGPSAD SQS+LYFAR STK
Sbjct: 317 GGYVELSKKLSLPLGYTLDRYEGLVLSVGGNGRSYVLILEAGPSADPSQSRLYFARISTK 376

Query: 395 VGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
           VGFCRVRVPFSSFRPVKPDDP +DPFLVHT+TIRFEPRRQ
Sbjct: 377 VGFCRVRVPFSSFRPVKPDDPVLDPFLVHTLTIRFEPRRQ 416

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544456|ref|XP_002513289.1| dihydroflavonal-4-reductase, putative [Ricinus communis] gi|223547197|gb|EEF48692.1| dihydroflavonal-4-reductase, putative [Ricinus communis]

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 303/345 (87%), Positives = 327/345 (94%), Gaps = 2/345 (0%)

Query: 90  QQQQQPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREG 149
           ++QQQ  S+SLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADD +SLDALLIREG
Sbjct: 60  RKQQQ--SLSLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDLESLDALLIREG 117

Query: 150 PMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEI 209
           PMCEFAIPGAQNTTVLVVGATSRIGRI+IRKLMLRGY+VKAL+RKADQ+V+D LPRSVEI
Sbjct: 118 PMCEFAIPGAQNTTVLVVGATSRIGRILIRKLMLRGYTVKALLRKADQQVIDSLPRSVEI 177

Query: 210 VLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQL 269
           V+GDVGD  +L +AVE CNKIIYCATARS+ITGDLFRVD+ GV N+TKAFQD+NNKLAQL
Sbjct: 178 VIGDVGDTSSLTSAVEGCNKIIYCATARSSITGDLFRVDHLGVSNLTKAFQDYNNKLAQL 237

Query: 270 RAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSG 329
           RAGKSSKSKLLLAKFKS+DSL GW+VRQGTYFQD VA KYDAGMDAKFE ++TGDAVFSG
Sbjct: 238 RAGKSSKSKLLLAKFKSSDSLIGWQVRQGTYFQDAVASKYDAGMDAKFEFTDTGDAVFSG 297

Query: 330 YVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFA 389
           YVFTRGGYVELSKKLSLPLG TLDRYEGLVLSVGGNGRSYVLILEAGPSAD +QSKLYFA
Sbjct: 298 YVFTRGGYVELSKKLSLPLGYTLDRYEGLVLSVGGNGRSYVLILEAGPSADTTQSKLYFA 357

Query: 390 RFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
           R +TKVGFCRVRVPFSSFR VKPDDPP+DPFLVHT+TIRFEPRRQ
Sbjct: 358 RITTKVGFCRVRVPFSSFRAVKPDDPPLDPFLVHTLTIRFEPRRQ 402

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467649|ref|XP_003604109.1| hypothetical protein MTR_4g005070 [Medicago truncatula] gi|355505164|gb|AES86306.1| hypothetical protein MTR_4g005070 [Medicago truncatula]

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/428 (72%), Positives = 350/428 (81%), Gaps = 3/428 (0%)

Query: 7   TVTPNPKLSSAYSYSHYFQNHSSPKWTLEMNACKWHHCRRGQMIVTKASSSGSGNKEKAG 66
           + +P+    +A  YS Y   +++   + ++N     + ++     T++SS        A 
Sbjct: 2   STSPSATTIAAAVYSKYNNINTTLSVSGQINTTFLSYTKKQH---TRSSSVQRLPPIAAA 58

Query: 67  KRSTNTKKSNTNTNPDALTQQQQQQQQQPVSISLDDVNPVGLGRKSRQIFDEVWRKFSGL 126
             + + K S +NT  +          +Q VS+SLDDVNPVGLGRKSRQIFDEVWRKFSGL
Sbjct: 59  PNTRDGKDSKSNTQNNNNDDDDDNDDKQSVSLSLDDVNPVGLGRKSRQIFDEVWRKFSGL 118

Query: 127 GQISRTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGY 186
           GQISRT R DD ++LDALL+REGPMCEFAIPGAQNTTVLVVGATSRIGRIV+RKLMLRGY
Sbjct: 119 GQISRTIRTDDVEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGY 178

Query: 187 SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFR 246
           SVKALVRKAD+EVV++LPRSVEIV+GDVGDP T+KAAVE CNKIIYCATARSTITGDLFR
Sbjct: 179 SVKALVRKADEEVVELLPRSVEIVIGDVGDPNTVKAAVEGCNKIIYCATARSTITGDLFR 238

Query: 247 VDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVA 306
           VD QGVYN++KAFQD NN+LAQLRAGKSSKSKL +AKFKS  SL+GWEVRQGTYF+DVV 
Sbjct: 239 VDQQGVYNLSKAFQDHNNQLAQLRAGKSSKSKLTIAKFKSESSLDGWEVRQGTYFEDVVT 298

Query: 307 FKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNG 366
            KYD GMDAKFE +E G AVFSGYVF RGGYVELSKKLSLPLG TLDRYEGLVLSVGGNG
Sbjct: 299 SKYDGGMDAKFEFTENGAAVFSGYVFNRGGYVELSKKLSLPLGSTLDRYEGLVLSVGGNG 358

Query: 367 RSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMT 426
           R YVLILEAGPS D SQSKLYFAR STKVGFCRVRVPFSSFRPVKPD P +DPFLVHT+T
Sbjct: 359 RPYVLILEAGPSGDPSQSKLYFARISTKVGFCRVRVPFSSFRPVKPDHPVLDPFLVHTLT 418

Query: 427 IRFEPRRQ 434
           IRFEPRRQ
Sbjct: 419 IRFEPRRQ 426

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483230|ref|XP_003632924.1| PREDICTED: uncharacterized protein LOC100256501 isoform 2 [Vitis vinifera]

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 325/418 (77%), Positives = 349/418 (83%), Gaps = 20/418 (4%)

Query: 28  SSPKWTLEMNACKWHHCRRGQMIVTKASSSGSGNKEKAGKRSTNTKKSNTNTNPD----- 82
           S P    E  A +W    R  ++V +A+S+     E AGK +   KK   +   D     
Sbjct: 36  SLPNSNWEPFATRWRPHTRSPLLVPRAASA-----ETAGKDNKRKKKKRPDEEEDDDGGK 90

Query: 83  ----ALTQQQQQQQQQPVS-ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADD 137
                  +Q+QQ QQ  VS ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTR D+
Sbjct: 91  DKQEQEQEQEQQLQQASVSMISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRTDE 150

Query: 138 KDSLDALLIREG-PMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD 196
               + LLIREG PMCEFAIPGAQNTTVLVVGATSRIGRIV+RKLMLRGY+VKALVRKAD
Sbjct: 151 ----ETLLIREGGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKAD 206

Query: 197 QEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVT 256
           QEVVDMLPRSVEI +GDVGDP  +KAAVE CNKIIYCATARS ITGDL RVDYQGVYN T
Sbjct: 207 QEVVDMLPRSVEIAIGDVGDPDAVKAAVEGCNKIIYCATARSAITGDLNRVDYQGVYNAT 266

Query: 257 KAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAK 316
           KAFQD+NNKLAQLRAGKSSKSKLLLAKFKS DSLNGWE+RQGTYFQDV+A KYD GMDAK
Sbjct: 267 KAFQDYNNKLAQLRAGKSSKSKLLLAKFKSVDSLNGWEIRQGTYFQDVIAAKYDGGMDAK 326

Query: 317 FELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAG 376
           FE  ETGDAVFSGYVFTRGGYVELSKKLSLPLG TLDRYEGLVLSVGGNGRSY+LILEAG
Sbjct: 327 FEFMETGDAVFSGYVFTRGGYVELSKKLSLPLGRTLDRYEGLVLSVGGNGRSYILILEAG 386

Query: 377 PSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
           PSAD +QSK+YFAR STKVGFCRVRVPFSSFRPVKPDDPP+DPFLVHT+TIRFEPRRQ
Sbjct: 387 PSADTTQSKMYFARISTKVGFCRVRVPFSSFRPVKPDDPPLDPFLVHTLTIRFEPRRQ 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443490|ref|XP_002274181.1| PREDICTED: uncharacterized protein LOC100256501 isoform 1 [Vitis vinifera]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 325/418 (77%), Positives = 349/418 (83%), Gaps = 20/418 (4%)

Query: 28  SSPKWTLEMNACKWHHCRRGQMIVTKASSSGSGNKEKAGKRSTNTKKSNTNTNPD----- 82
           S P    E  A +W    R  ++V +A+S+     E AGK +   KK   +   D     
Sbjct: 36  SLPNSNWEPFATRWRPHTRSPLLVPRAASA-----ETAGKDNKRKKKKRPDEEEDDDGGK 90

Query: 83  ----ALTQQQQQQQQQPVS-ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADD 137
                  +Q+QQ QQ  VS ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTR D+
Sbjct: 91  DKQEQEQEQEQQLQQASVSMISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRTDE 150

Query: 138 KDSLDALLIREG-PMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD 196
               + LLIREG PMCEFAIPGAQNTTVLVVGATSRIGRIV+RKLMLRGY+VKALVRKAD
Sbjct: 151 ----ETLLIREGGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKAD 206

Query: 197 QEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVT 256
           QEVVDMLPRSVEI +GDVGDP  +KAAVE CNKIIYCATARS ITGDL RVDYQGVYN T
Sbjct: 207 QEVVDMLPRSVEIAIGDVGDPDAVKAAVEGCNKIIYCATARSAITGDLNRVDYQGVYNAT 266

Query: 257 KAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAK 316
           KAFQD+NNKLAQLRAGKSSKSKLLLAKFKS DSLNGWE+RQGTYFQDV+A KYD GMDAK
Sbjct: 267 KAFQDYNNKLAQLRAGKSSKSKLLLAKFKSVDSLNGWEIRQGTYFQDVIAAKYDGGMDAK 326

Query: 317 FELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAG 376
           FE  ETGDAVFSGYVFTRGGYVELSKKLSLPLG TLDRYEGLVLSVGGNGRSY+LILEAG
Sbjct: 327 FEFMETGDAVFSGYVFTRGGYVELSKKLSLPLGRTLDRYEGLVLSVGGNGRSYILILEAG 386

Query: 377 PSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
           PSAD +QSK+YFAR STKVGFCRVRVPFSSFRPVKPDDPP+DPFLVHT+TIRFEPRRQ
Sbjct: 387 PSADTTQSKMYFARISTKVGFCRVRVPFSSFRPVKPDDPPLDPFLVHTLTIRFEPRRQ 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735670|emb|CBI18357.3| unnamed protein product [Vitis vinifera]

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 302/338 (89%), Positives = 316/338 (93%), Gaps = 5/338 (1%)

Query: 98  ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREG-PMCEFAI 156
           ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTR D+    + LLIREG PMCEFAI
Sbjct: 2   ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRTDE----ETLLIREGGPMCEFAI 57

Query: 157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGD 216
           PGAQNTTVLVVGATSRIGRIV+RKLMLRGY+VKALVRKADQEVVDMLPRSVEI +GDVGD
Sbjct: 58  PGAQNTTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKADQEVVDMLPRSVEIAIGDVGD 117

Query: 217 PCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSK 276
           P  +KAAVE CNKIIYCATARS ITGDL RVDYQGVYN TKAFQD+NNKLAQLRAGKSSK
Sbjct: 118 PDAVKAAVEGCNKIIYCATARSAITGDLNRVDYQGVYNATKAFQDYNNKLAQLRAGKSSK 177

Query: 277 SKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGG 336
           SKLLLAKFKS DSLNGWE+RQGTYFQDV+A KYD GMDAKFE  ETGDAVFSGYVFTRGG
Sbjct: 178 SKLLLAKFKSVDSLNGWEIRQGTYFQDVIAAKYDGGMDAKFEFMETGDAVFSGYVFTRGG 237

Query: 337 YVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVG 396
           YVELSKKLSLPLG TLDRYEGLVLSVGGNGRSY+LILEAGPSAD +QSK+YFAR STKVG
Sbjct: 238 YVELSKKLSLPLGRTLDRYEGLVLSVGGNGRSYILILEAGPSADTTQSKMYFARISTKVG 297

Query: 397 FCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
           FCRVRVPFSSFRPVKPDDPP+DPFLVHT+TIRFEPRRQ
Sbjct: 298 FCRVRVPFSSFRPVKPDDPPLDPFLVHTLTIRFEPRRQ 335

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	437
TAIR|locus:2015651	598	HCF173 "high chlorophyll fluor	0.778	0.568	0.764	1.5e-140
TAIR|locus:2119161	344	FLDH "farnesol dehydrogenase"	0.228	0.290	0.333	8.2e-05
TAIR|locus:2122083	395	HCF244 "high chlorophyll fluor	0.212	0.235	0.319	0.00014
TAIR|locus:2180019	417	PCB2 "PALE-GREEN AND CHLOROPHY	0.288	0.302	0.262	0.00054
UNIPROTKB|Q60A54	328	MCA1017 "Nucleoside diphosphat	0.199	0.265	0.344	0.00098

TAIR|locus:2015651 HCF173 "high chlorophyll fluorescence phenotype 173" [Arabidopsis thaliana (taxid:3702)]

 Score = 1375 (489.1 bits), Expect = 1.5e-140, P = 1.5e-140
 Identities = 260/340 (76%), Positives = 294/340 (86%)

Query:    95 PVSISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIREGPMCEF 154
             P ++ LDDVNPVGLGR+SRQIFDEVWRKFSGLGQ+SRTTR D++++LD+LLIREGPMCEF
Sbjct:    96 PPTLKLDDVNPVGLGRRSRQIFDEVWRKFSGLGQMSRTTRPDEQETLDSLLIREGPMCEF 155

Query:   155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDV 214
             A+PGAQN TVLVVGATSRIGRIV+RKLMLRGY+VKALVRK D+EV+ MLPRSV+IV+GDV
Sbjct:   156 AVPGAQNVTVLVVGATSRIGRIVVRKLMLRGYTVKALVRKQDEEVMSMLPRSVDIVVGDV 215

Query:   215 GDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQXXXXXX 274
             G+P TLK+AVE+C+KIIYCATARSTIT DL RVD+ GVYN+TKAFQD+NN+LAQ      
Sbjct:   216 GEPSTLKSAVESCSKIIYCATARSTITADLTRVDHLGVYNLTKAFQDYNNRLAQLRAGKS 275

Query:   275 XXXXXXXXXXXXXXXXNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTR 334
                             +GWE+RQGTYFQD  A KYD GMDAKFE +ET  A FSGYVFTR
Sbjct:   276 SKSKLLLAKFKSAESLDGWEIRQGTYFQDTTASKYDGGMDAKFEFTETERAEFSGYVFTR 335

Query:   335 GGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTK 394
             GGYVELSKKLSLPLG TLDRYEGLVLSVGGNGRSYV+ILEAGPS+D SQSK YFAR STK
Sbjct:   336 GGYVELSKKLSLPLGTTLDRYEGLVLSVGGNGRSYVVILEAGPSSDMSQSKQYFARISTK 395

Query:   395 VGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ 434
              GFCRVRVPFS+FRPV P+DPP+DPFLVHT+TIRFEP+RQ
Sbjct:   396 AGFCRVRVPFSAFRPVNPEDPPLDPFLVHTLTIRFEPKRQ 435

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006413 "translational initiation" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2119161 FLDH "farnesol dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 35/105 (33%), Positives = 56/105 (53%)

Query:   160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCT 219
             +N  +LV G+T  +G  +   L+ RG+SV+ALVR+   ++ D LP  VE+  GDV D  +
Sbjct:    11 ENMKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTS-DLSD-LPPEVELAYGDVTDYRS 68

Query:   220 LKAAVENCNKIIYCATARSTITGDLFR---VDYQGVYNVTKAFQD 261
             L  A   C+ + + A        D  R   V+  G+ NV +A ++
Sbjct:    69 LTDACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKE 113

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006721 "terpenoid metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0016487 "farnesol metabolic process" evidence=IDA

GO:0047886 "farnesol dehydrogenase activity" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2122083 HCF244 "high chlorophyll fluorescence phenotype 244" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
 Identities = 31/97 (31%), Positives = 50/97 (51%)

Query:   157 PGA--QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDV 214
             PG   + T++LVVGAT  +GR ++R+ +  GY V+ LVR        +      +V  D+
Sbjct:    73 PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL 132

Query:   215 GDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQG 251
               P T+ A +   + +I CAT R      +  VD++G
Sbjct:   133 SKPETIPATLVGIHTVIDCATGRPE--EPIKTVDWEG 167

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0003743 "translation initiation factor activity" evidence=IMP

GO:0010207 "photosystem II assembly" evidence=IMP

TAIR|locus:2180019 PCB2 "PALE-GREEN AND CHLOROPHYLL B REDUCED 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
 Identities = 36/137 (26%), Positives = 66/137 (48%)

Query:   140 SLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR------ 193
             SLD+ +        F     ++  VLVVG+T  IGR V+++++ RG++V A+ R      
Sbjct:    62 SLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGIR 121

Query:   194 -KADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC----NKIIYCATARSTITGDLFRVD 248
              K D+E      +   +   DV +   L+ ++EN     + ++ C  +R+    D +++D
Sbjct:   122 GKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIKDSWKID 181

Query:   249 YQGVYNVTKAFQDFNNK 265
             Y+   N   A + F  K
Sbjct:   182 YEATKNSLVAGKKFGAK 198

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA;IMP;TAS

GO:0051744 "3,8-divinyl protochlorophyllide a 8-vinyl reductase activity" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q60A54 MCA1017 "Nucleoside diphosphate sugar epimerase family protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 113 (44.8 bits), Expect = 0.00098, P = 0.00098
 Identities = 32/93 (34%), Positives = 51/93 (54%)

Query:   163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRK-ADQEVVDMLPRSVEIVLGDVGDPCTLK 221
             T LV GAT  +G  ++R L+ RG  V+A +R+ +D   +D L  +VE   GD+ D  +++
Sbjct:     2 TTLVTGATGHLGANLVRALLARGEKVRAFIRRQSDVAALDGL--AVERAYGDLRDRRSIR 59

Query:   222 AAVENCNKIIYCATARSTITGD---LFRVDYQG 251
              A+E   ++ + A   S   GD   LF V+  G
Sbjct:    60 DALEGVERLYHTAAFVSIRDGDRQELFDVNVVG 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      437       394   0.00095  117 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  245 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.63u 0.09s 26.72t   Elapsed:  00:00:02
  Total cpu time:  26.63u 0.09s 26.72t   Elapsed:  00:00:02
  Start:  Tue May 21 06:16:04 2013   End:  Tue May 21 06:16:06 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.135.115.1 SubName- Full=Putative uncharacterized protein; (495 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	437
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	4e-22
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	6e-14
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-11
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	1e-10
pfam08547	156	pfam08547, CIA30, Complex I intermediate-associate	2e-10
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	5e-10
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-09
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-09
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	3e-08
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	6e-08
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-07
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-07
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	6e-07
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	8e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-06
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	6e-06
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	7e-06
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-05
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-05
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	2e-05
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	3e-05
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	4e-05
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-05
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-05
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	6e-05
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	1e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	3e-04
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-04
pfam02254	116	pfam02254, TrkA_N, TrkA-N domain	4e-04
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-04
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-04
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	5e-04
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-04
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	0.002
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	0.002
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	0.004
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	0.004
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	0.004
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	0.004

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 93.5 bits (233), Expect = 4e-22
 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 1/101 (0%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
            VLVVGAT ++GR V+R+L+ RGY V+ALVR   Q    +     E+V+GD+ D  +L A
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQ-AEKLEAAGAEVVVGDLTDAESLAA 59

Query: 223 AVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFN 263
           A+E  + +I  A +          VDY G  N+  A +   
Sbjct: 60  ALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG 100

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 71.9 bits (177), Expect = 6e-14
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           +LV GAT  +G  ++R L+ +GY V+ALVR      V +    VE+V GD+ D  +L AA
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGLPVEVVEGDLTDAASLAAA 59

Query: 224 VENCNKIIYCATARSTITGD---LFRVDYQGVYNVTKA 258
           ++ C+++ + A   S    D   L+R + +G  NV  A
Sbjct: 60  MKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDA 97

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 13/119 (10%)

Query: 159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--------QEVVDMLPRSVEIV 210
            ++ TVLVVGAT  IG+ V+R+L+ RGY+V A+ R+          ++    LP + E+V
Sbjct: 58  PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGA-EVV 116

Query: 211 LGDVGDPCTLKAAVENCNK----IIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK 265
            GDV D  +L+  + +       ++ C  +R+    D +++DYQ   N   A ++   K
Sbjct: 117 FGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAK 175

Length = 390

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 6/101 (5%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK-ADQEVVDMLPRSVEIVLGDVGDPCTL 220
             VLV GAT  +G  V+R L+ +G  V+ LVR  +D+  ++ L   VEIV GD+ DP +L
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLD--VEIVEGDLRDPASL 58

Query: 221 KAAVENCNKIIYCATARSTITGD---LFRVDYQGVYNVTKA 258
           + AV  C  + + A        D   ++  + +G  N+ +A
Sbjct: 59  RKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRA 99

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|219896 pfam08547, CIA30, Complex I intermediate-associated protein 30 (CIA30)

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 48/149 (32%), Positives = 64/149 (42%), Gaps = 30/149 (20%)

Query: 284 FKSADSLNGWEVRQGTYFQDVVAFKYDAGM----DAKFELSETGDAVFSGYVFT--RGGY 337
           F   + L+ W         D V       M     +   LS  G AVFSG +     GG+
Sbjct: 3   FTQPEDLDDWTAVN-----DTV-------MGGVSTSSLTLSPDGTAVFSGNLSLENNGGF 50

Query: 338 VEL-SKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVG 396
             + +K    PL   L  Y GL L V G+GR+Y   L+   + D      Y A F TK G
Sbjct: 51  ASVRTKNRKPPLD--LSGYTGLELRVKGDGRTYKFNLK---TEDEFDGLSYQADFDTKPG 105

Query: 397 -FCRVRVPFSSFRP-----VKPDDPPMDP 419
            +  V++PFS F+P     V  D PP+D 
Sbjct: 106 EWQTVKIPFSDFKPTFRGRVVDDAPPLDL 134

This protein is associated with mitochondrial Complex I intermediate-associated protein 30 (CIA30) in human and mouse. The family is also present in Schizosaccharomyces pombe which does not contain the NADH dehydrogenase component of complex I, or many of the other essential subunits. This means it is possible that this family of protein may not be directly involved in oxidative phosphorylation. Length = 156

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           + V+GAT + GR ++++L+ RG+ V AL R   +         V  V  D+ D   L  A
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP----APGVTPVQKDLFDLADLAEA 56

Query: 224 VENCNKIIYCATARS 238
           +   + ++    AR 
Sbjct: 57  LAGVDAVVDAFGARP 71

Length = 182

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           +L++GAT  IGR + R+L+ +G+ V  LVR   + +       V +V GD+ D  +L  A
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNT-KRLSKEDQEPVAVVEGDLRDLDSLSDA 59

Query: 224 VENCNKIIYCATARSTITGDLFRVDYQGVYNVTKA 258
           V+  + +I+ A      T D   VD +G  NV +A
Sbjct: 60  VQGVDVVIHLA-GAPRDTRDFCEVDVEGTRNVLEA 93

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           +LV GAT  +G  V+R+L+ RG+ V+A VR    E    L   VE+VLGD+ DP +L A 
Sbjct: 3   ILVTGATGFVGGAVVRELLARGHEVRAAVRNP--EAAAALAGGVEVVLGDLRDPKSLVAG 60

Query: 224 VENCNKIIYCATARSTITGDLFRVDYQGVYNVTKA 258
            +    +         + G       Q    V  A
Sbjct: 61  AKG---VDGVLLISGLLDGSDAFRAVQVTAVVRAA 92

Length = 275

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 24/121 (19%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVR---KAD--QEVVDMLPRSVEIVLGDVGDP 217
           ++LV+GAT  +GR ++R+ +  GY V+ LVR   KA   +E         E+V GD+  P
Sbjct: 2   SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------GAELVYGDLSLP 55

Query: 218 CTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKS 277
            TL  + +    II  +T+R +   +  ++D+ G             KLA + A K++K 
Sbjct: 56  ETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDG-------------KLALIEAAKAAKI 102

Query: 278 K 278
           K
Sbjct: 103 K 103

Length = 317

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           VLV GAT  +G  ++ +L+  G+ V+ALVR  ++         V +V GD+ DP +L+AA
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAA 60

Query: 224 VENCNKIIY 232
           +E  +   Y
Sbjct: 61  LEGIDTAYY 69

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
           T  V+GA+  IGR V R+L  RG+ V+ + R             VEIV  D  D  ++ A
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGS---KLAWLPGVEIVAADAMDASSVIA 57

Query: 223 AVENCNKIIYCATARSTITGDLF 245
           A    + I +CA    T   +LF
Sbjct: 58  AARGADVIYHCANPAYTRWEELF 80

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRS-VEIVLGDVGDPCTLKA 222
           +LV GAT   G  V+R  +  G+ V+ALVR    E+   L  + VE+V GD+ D  +L  
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVE 60

Query: 223 AVE 225
           A++
Sbjct: 61  ALK 63

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 50.7 bits (121), Expect = 6e-07
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           +LV G    IG  ++ +L+  G+ V+ L R  D   +D L   VE V+ D+ D   +   
Sbjct: 3   ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDG--LDPLLSGVEFVVLDLTDRDLVDEL 60

Query: 224 VENCNKIIY-CATARSTITG------DLFRVDYQGVYNVTKAFQDFNNK 265
            +     +   A   S          +   V+  G  N+ +A +    K
Sbjct: 61  AKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVK 109

Length = 314

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 50.0 bits (120), Expect = 8e-07
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           +LV GAT RIG  V   L+  G  V+ALVR  ++    +  R  E+V+GD+ DP  L AA
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDER-AAALAARGAEVVVGDLDDPAVLAAA 59

Query: 224 VENCNKIIYCA 234
           +   + + + A
Sbjct: 60  LAGVDAVFFLA 70

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           + ++GAT R G  ++R+ + RG+ V ALVR  D   +      +++V GDV D   +K A
Sbjct: 2   IAIIGATGRTGSAIVREALARGHEVTALVR--DPAKLPAEHEKLKVVQGDVLDLEDVKEA 59

Query: 224 VENCNKIIYC 233
           +E  + +I  
Sbjct: 60  LEGQDAVISA 69

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 47.3 bits (113), Expect = 6e-06
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 8/69 (11%)

Query: 164 VLVVGATSRIGRIVIRKLMLR-GYSVKALVR----KADQEVVDMLPRSVEIVLGDVGDPC 218
           +LV GAT + G  V+R L+   G+ V+AL R     A + +       VE+V GD+ DP 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPG---VEVVQGDLDDPE 57

Query: 219 TLKAAVENC 227
           +L+AA++  
Sbjct: 58  SLEAALKGV 66

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRK-ADQEVVDMLPR------SVEIVLGDVGD 216
           V V GA+  IG  ++++L+ RGY+V+A VR   D++ V  L         +++   D+ D
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 217 PCTLKAAVENCNKIIYCAT 235
             +  AA++ C+ + + A+
Sbjct: 61  YGSFDAAIDGCDGVFHVAS 79

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 8/131 (6%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVR---KADQEVVDMLPRSVEIVLGDVGDPCT 219
            V V GAT  IGR V+ +L  RG  V    R    A + +V      V  V  D+ D  +
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDES 61

Query: 220 LKAAVENCNKIIYCATARS-TITGDLFRVDYQGVYNVTKAFQDFNNK----LAQLRAGKS 274
           ++ A+E  + +I        T       V  +G   + KA ++   +    ++ L A  +
Sbjct: 62  IRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISALGADAN 121

Query: 275 SKSKLLLAKFK 285
           S SK L +K +
Sbjct: 122 SPSKYLRSKAE 132

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 10/105 (9%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVV-------DMLPRSVEIVLGDVGD 216
           VLV GA+  +   V+ +L+ RGY V+A VR   +          D  P  +E+ + D+ D
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 217 PCTLKAAVENCNKIIYCATA---RSTITGDLFRVDYQGVYNVTKA 258
             +    ++ C  + + AT     S    ++ +    G  N  KA
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKA 105

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
            VLV GA   IGR ++ KL+ RG  V+  VR A+            +VL ++ D  +   
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPS-------VVLAELPDIDSFTD 53

Query: 223 AVENCNKIIYCA 234
                + +++ A
Sbjct: 54  LFLGVDAVVHLA 65

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 163 TVLVVGATSRIGRIVIRKLM-LRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
            + + GAT  +G  ++  L+   G++V  L R +     +  P  V++V  D     +L 
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESLV 60

Query: 222 AAVENCNKIIYCATARSTI 240
           AA++  +  +  A   + I
Sbjct: 61  AALKGVD-AVISALGGAAI 78

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 14/109 (12%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPR-------SVEIVLGD 213
            VLV GAT  I   ++ +L+  GY V+  VR      ++  +L            IV  D
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIV-DD 59

Query: 214 VGDPCTLKAAVENCNKIIYCA-TARSTIT---GDLFRVDYQGVYNVTKA 258
           +  P     A++  + +I+ A     T      D+     +G  NV +A
Sbjct: 60  LTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEA 108

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 44.9 bits (106), Expect = 4e-05
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)

Query: 146 IREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPR 205
           +      E      +  TV V GAT R G+ ++ +L+ +G++VKA VR  D+     LP+
Sbjct: 2   MEGAEASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDK-AKTSLPQ 60

Query: 206 --SVEIVLGDVGD-PCTLKAAVENCNKIIYCATA-RSTITGDLF---RVDYQGVYNVTKA 258
             S++IV  DV +    L  A+ + +  + CAT  R +   D F   +VD  G  N+ +A
Sbjct: 61  DPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRSF--DPFAPWKVDNFGTVNLVEA 118

Length = 251

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 165 LVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVV-DMLPRSVEIVLGDVGDPCTLKAA 223
           LV GAT ++G  V+  L+ +  SV ALVR  + E         VE+  GD  DP TL+ A
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVR--NPEKAKAFAADGVEVRQGDYDDPETLERA 59

Query: 224 VENCNKIIY 232
            E  ++++ 
Sbjct: 60  FEGVDRLLL 68

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           +LV G T  IG  ++R+L+  GY V  L R+   E   +    +    GD+ DP  L+  
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSES--LNTGRIRFHEGDLTDPDALERL 58

Query: 224 VENC--NKIIYCAT-----ARSTITGDLFRVDYQGVYNVTKA 258
           +     + +I+ A      A      D  R +  G   + +A
Sbjct: 59  LAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEA 100

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLK 221
            L+ G  S IGR ++ + +  G  V  L R A++   +       V +V GDV      +
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQ 68

Query: 222 AAVENC 227
            AV+  
Sbjct: 69  RAVDQT 74

Length = 263

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 44.2 bits (105), Expect = 6e-05
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 15/82 (18%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVR-----------KADQEVVDMLPRSVEIVLG 212
           VLV GA   IG  ++  L+ +GY V+A V             +  EV D     +E+V G
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKD----KIEVVTG 56

Query: 213 DVGDPCTLKAAVENCNKIIYCA 234
           D+ DP +++ A++ C+ + + A
Sbjct: 57  DIRDPDSVRKAMKGCDVVFHLA 78

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 17/116 (14%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPR----SVEIVLGDVGDPC 218
            VLV GA   IG  +  +L+  G+ V+AL          +L          + GDV D  
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 219 TLKAAVENCN---------KIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK 265
            ++  V+ C+          I Y  TA  +        +  G  NV +A      K
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLS----YVETNVFGTLNVLEAACVLYRK 112

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVR--KADQEVVDMLPRSVEIVLGDVGDPCTLK 221
           V V GAT  IG  V+R+L+  G+ V  L R      ++        ++  GD+ D   L+
Sbjct: 3   VFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAA---GAQVHRGDLEDLDILR 59

Query: 222 AAVENCNKIIYCA 234
            A    + +I+ A
Sbjct: 60  KAAAEADAVIHLA 72

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDP 217
           +    L+ G  S +GR ++ + +  G  V  L R A++  E+      +V  V GDV   
Sbjct: 3   KGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSL 62

Query: 218 CTLKAAVENC 227
              + AV  C
Sbjct: 63  ADNERAVARC 72

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKA 222
           ++++G   R+GR +  +L   G  V  + +  D E V+ L    V +V+GD  D   L+ 
Sbjct: 1   IIIIGY-GRVGRSLAEELREGGPDVVVIDK--DPERVEELREEGVPVVVGDATDEEVLEE 57

Query: 223 A-VENCNKIIYCAT 235
           A +E  + ++  AT
Sbjct: 58  AGIEEADAVV-AAT 70

This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 16/116 (13%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKAD--QEVVDMLPRSVEIVLGDVGD 216
           ++ TVLV GA   IG+  +  L+  G   V A VR       +V      V  +  DV D
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVTD 61

Query: 217 PCTLKAAVENCNKIIY----------CATARSTITGDL---FRVDYQGVYNVTKAF 259
           P ++KAA      +                       L     V+  G+  + +AF
Sbjct: 62  PESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQAF 117

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 18/115 (15%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQEVVDMLPRSVEIVLGDVGDPC 218
           +   VLV GA   IGR  + +L+ RG + V A  R  D E V  L   V  +  DV DP 
Sbjct: 5   KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAAR--DPESVTDLGPRVVPLQLDVTDPA 62

Query: 219 TLKAAVENC--------NKIIYCATARSTITGDL------FRVDYQGVYNVTKAF 259
           ++ AA E          N  I+  T    + GD          +Y G   + +AF
Sbjct: 63  SVAAAAEAASDVTILVNNAGIF-RTGSLLLEGDEDALRAEMETNYFGPLAMARAF 116

Length = 238

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)

Query: 155 AIPGAQNTT----VLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD------QEVVDM-- 202
           AIP   +T       V GAT ++G   +R+L+  G+ V+A VR A       Q V  M  
Sbjct: 70  AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKL 129

Query: 203 -----LP-RSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR----STITGDLFRVDYQGV 252
                 P   +EIV  D+  P  +  A+ N + +I C  A       +TG  +R+DY   
Sbjct: 130 DVEGTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGP-YRIDYLAT 188

Query: 253 YNVTKA 258
            N+  A
Sbjct: 189 KNLVDA 194

Length = 576

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           VL+VG    IG  ++  L+  G  V+   R      + +    V+ + GD  +   L++A
Sbjct: 2   VLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPL--GGVDYIKGDYENRADLESA 59

Query: 224 VENCNKIIYCATA 236
           +   + +I+ A+ 
Sbjct: 60  LVGIDTVIHLAST 72

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-----QEVVDMLPRSVE---I 209
           G+Q  TV V GA+  IG  ++ +L+ RGY+V+A VR        + ++D LP +     +
Sbjct: 2   GSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLD-LPGATTRLTL 60

Query: 210 VLGDVGDPCTLKAAVENCNKIIYCAT 235
              D+    +   A+  C  + + AT
Sbjct: 61  WKADLAVEGSFDDAIRGCTGVFHVAT 86

Length = 351

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 20/111 (18%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-----------QEVVDMLPRSVEIVL 211
           T  V+G T  +  ++I+ L+ +GY+V   VR  +           QE+ D+     +I  
Sbjct: 11  TACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDL-----KIFG 65

Query: 212 GDVGDPCTLKAAVENCNKIIYCAT----ARSTITGDLFRVDYQGVYNVTKA 258
            D+ D  + +A +  C+ + + AT    A      D+ +   QGV+NV KA
Sbjct: 66  ADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKA 116

Length = 338

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTL 220
            VL+ G +S IG  +   L  +GY V A  R  D  + + ++L  ++E++  DV D  ++
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESI 61

Query: 221 KAAVENC 227
           KAAV+  
Sbjct: 62  KAAVKEV 68

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 38.7 bits (91), Expect = 0.004
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 9/70 (12%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVE-------IVLGDVG 215
            V++ GA++ +GR   R    RG  V  L R   +E ++ L   +         V+ DV 
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLAR--GEEGLEALAAEIRAAGGEALAVVADVA 67

Query: 216 DPCTLKAAVE 225
           D   ++AA +
Sbjct: 68  DAEAVQAAAD 77

Length = 334

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 10/110 (9%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDMLPRS---VEIVLGDVGDPC 218
           + LVVG +  +GR ++ +L+ RG      V   D +   ++ P S   V+   GD+ DP 
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRG---NPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQ 57

Query: 219 TLKAAV--ENCNKIIYCATARSTITGDLF-RVDYQGVYNVTKAFQDFNNK 265
            L+ A   +  N + + A+       DL+ +V+ QG  NV +A +    K
Sbjct: 58  DLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQGTRNVIEACRKCGVK 107

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPR-SVEIVLGDV 214
             +    L+ GA+S IG    R L   G  V    R+ +  + + D +   +   +  DV
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV 62

Query: 215 GDPCTLKAAVEN 226
            D   ++AA+E 
Sbjct: 63  TDRAAVEAAIEA 74

Length = 246

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	437
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.95
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.93
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.92
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.92
PLN02653	340	GDP-mannose 4,6-dehydratase	99.91
PLN02214	342	cinnamoyl-CoA reductase	99.91
PLN02572	442	UDP-sulfoquinovose synthase	99.9
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.89
PLN02686	367	cinnamoyl-CoA reductase	99.88
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.88
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.88
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.87
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.87
PLN00198	338	anthocyanidin reductase; Provisional	99.87
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.87
PLN02427	386	UDP-apiose/xylose synthase	99.87
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.87
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.87
PLN02206	442	UDP-glucuronate decarboxylase	99.87
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.86
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.86
PLN02650	351	dihydroflavonol-4-reductase	99.86
PLN02240	352	UDP-glucose 4-epimerase	99.86
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.86
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.86
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.85
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.85
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.85
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.84
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.84
CHL00194	317	ycf39 Ycf39; Provisional	99.84
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.84
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.83
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.83
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.83
PLN02260	668	probable rhamnose biosynthetic enzyme	99.82
PLN02583	297	cinnamoyl-CoA reductase	99.82
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.8
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.78
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.78
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.78
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.78
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.78
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.77
PRK05865	854	hypothetical protein; Provisional	99.76
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.76
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.75
PLN02778	298	3,5-epimerase/4-reductase	99.75
PRK06482	276	short chain dehydrogenase; Provisional	99.75
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.73
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.72
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.72
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.72
PRK06194	287	hypothetical protein; Provisional	99.71
PRK12320	699	hypothetical protein; Provisional	99.71
PRK07201	657	short chain dehydrogenase; Provisional	99.71
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.7
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.7
PLN00016	378	RNA-binding protein; Provisional	99.69
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.69
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.67
PRK06180	277	short chain dehydrogenase; Provisional	99.66
PRK08263	275	short chain dehydrogenase; Provisional	99.66
PRK05876	275	short chain dehydrogenase; Provisional	99.66
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.65
PRK09134	258	short chain dehydrogenase; Provisional	99.65
PLN02253	280	xanthoxin dehydrogenase	99.65
PLN02996	491	fatty acyl-CoA reductase	99.65
PRK09135	249	pteridine reductase; Provisional	99.65
PRK06398	258	aldose dehydrogenase; Validated	99.64
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.64
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.64
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.63
PRK05717	255	oxidoreductase; Validated	99.63
PRK08339	263	short chain dehydrogenase; Provisional	99.63
PRK06139	330	short chain dehydrogenase; Provisional	99.63
PRK06182	273	short chain dehydrogenase; Validated	99.63
PRK07825	273	short chain dehydrogenase; Provisional	99.63
PRK05875	276	short chain dehydrogenase; Provisional	99.63
PRK07063	260	short chain dehydrogenase; Provisional	99.63
PRK07109	334	short chain dehydrogenase; Provisional	99.63
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.62
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.62
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.62
PRK07806	248	short chain dehydrogenase; Provisional	99.62
PRK08265	261	short chain dehydrogenase; Provisional	99.62
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.62
PRK07774	250	short chain dehydrogenase; Provisional	99.61
PLN02260	668	probable rhamnose biosynthetic enzyme	99.61
PRK06114	254	short chain dehydrogenase; Provisional	99.61
PRK07067	257	sorbitol dehydrogenase; Provisional	99.61
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.61
PRK08589	272	short chain dehydrogenase; Validated	99.61
PLN03209	576	translocon at the inner envelope of chloroplast su	99.61
PRK05867	253	short chain dehydrogenase; Provisional	99.61
PRK07478	254	short chain dehydrogenase; Provisional	99.61
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.6
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.6
PRK05854	313	short chain dehydrogenase; Provisional	99.6
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.6
PRK07775	274	short chain dehydrogenase; Provisional	99.6
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.6
PRK07856	252	short chain dehydrogenase; Provisional	99.6
PRK07024	257	short chain dehydrogenase; Provisional	99.59
PRK08278	273	short chain dehydrogenase; Provisional	99.59
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.59
PRK05993	277	short chain dehydrogenase; Provisional	99.59
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.59
PRK06179	270	short chain dehydrogenase; Provisional	99.59
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.59
PRK12939	250	short chain dehydrogenase; Provisional	99.59
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.58
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.58
PRK06196	315	oxidoreductase; Provisional	99.58
PRK07890	258	short chain dehydrogenase; Provisional	99.58
PRK06128	300	oxidoreductase; Provisional	99.58
PRK06197	306	short chain dehydrogenase; Provisional	99.58
PRK05866	293	short chain dehydrogenase; Provisional	99.58
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.58
PRK06483	236	dihydromonapterin reductase; Provisional	99.58
PRK07062	265	short chain dehydrogenase; Provisional	99.57
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.57
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK12746	254	short chain dehydrogenase; Provisional	99.57
PRK08267	260	short chain dehydrogenase; Provisional	99.57
PRK12747	252	short chain dehydrogenase; Provisional	99.57
PRK06138	252	short chain dehydrogenase; Provisional	99.57
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK06101	240	short chain dehydrogenase; Provisional	99.57
PRK06523	260	short chain dehydrogenase; Provisional	99.56
PRK06500	249	short chain dehydrogenase; Provisional	99.56
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
PRK08251	248	short chain dehydrogenase; Provisional	99.56
PRK06914	280	short chain dehydrogenase; Provisional	99.56
PRK06172	253	short chain dehydrogenase; Provisional	99.56
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.56
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
PRK09291	257	short chain dehydrogenase; Provisional	99.56
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.56
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.55
PRK09072	263	short chain dehydrogenase; Provisional	99.55
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.55
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.55
PRK05872	296	short chain dehydrogenase; Provisional	99.55
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK07035	252	short chain dehydrogenase; Provisional	99.55
PRK12828	239	short chain dehydrogenase; Provisional	99.55
PRK07814	263	short chain dehydrogenase; Provisional	99.55
PRK07985	294	oxidoreductase; Provisional	99.55
PRK06841	255	short chain dehydrogenase; Provisional	99.55
PRK07102	243	short chain dehydrogenase; Provisional	99.54
PRK08643	256	acetoin reductase; Validated	99.54
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.54
PRK07791	286	short chain dehydrogenase; Provisional	99.54
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.54
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.54
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.54
PRK10538	248	malonic semialdehyde reductase; Provisional	99.54
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.54
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.53
PRK07023	243	short chain dehydrogenase; Provisional	99.53
PRK08264	238	short chain dehydrogenase; Validated	99.53
PRK09186	256	flagellin modification protein A; Provisional	99.53
PRK12829	264	short chain dehydrogenase; Provisional	99.53
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.53
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.53
PRK08628	258	short chain dehydrogenase; Provisional	99.53
PRK06123	248	short chain dehydrogenase; Provisional	99.53
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.53
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
PRK07454	241	short chain dehydrogenase; Provisional	99.53
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.53
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.53
PRK06484	520	short chain dehydrogenase; Validated	99.52
PRK12367	245	short chain dehydrogenase; Provisional	99.52
PRK05855	582	short chain dehydrogenase; Validated	99.52
PRK07060	245	short chain dehydrogenase; Provisional	99.52
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.52
PRK08226	263	short chain dehydrogenase; Provisional	99.52
PRK05693	274	short chain dehydrogenase; Provisional	99.52
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.52
PRK07904	253	short chain dehydrogenase; Provisional	99.52
PRK07576	264	short chain dehydrogenase; Provisional	99.52
PRK07074	257	short chain dehydrogenase; Provisional	99.51
PRK12937	245	short chain dehydrogenase; Provisional	99.51
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.51
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.51
PRK12827	249	short chain dehydrogenase; Provisional	99.51
PRK08324	681	short chain dehydrogenase; Validated	99.5
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.5
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.5
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.5
PRK09242	257	tropinone reductase; Provisional	99.5
PRK08303	305	short chain dehydrogenase; Provisional	99.5
PRK05650	270	short chain dehydrogenase; Provisional	99.5
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.5
PRK08219	227	short chain dehydrogenase; Provisional	99.5
PRK12743	256	oxidoreductase; Provisional	99.5
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.5
PRK12742	237	oxidoreductase; Provisional	99.49
PRK07326	237	short chain dehydrogenase; Provisional	99.49
PRK06181	263	short chain dehydrogenase; Provisional	99.49
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.49
PRK06949	258	short chain dehydrogenase; Provisional	99.49
PRK06057	255	short chain dehydrogenase; Provisional	99.49
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.49
PRK07677	252	short chain dehydrogenase; Provisional	99.49
PRK06125	259	short chain dehydrogenase; Provisional	99.49
PRK05884	223	short chain dehydrogenase; Provisional	99.48
PRK12744	257	short chain dehydrogenase; Provisional	99.48
PLN02780	320	ketoreductase/ oxidoreductase	99.48
PRK08177	225	short chain dehydrogenase; Provisional	99.48
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.47
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.47
PRK07831	262	short chain dehydrogenase; Provisional	99.47
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.47
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.47
PRK08703	239	short chain dehydrogenase; Provisional	99.47
PRK06701	290	short chain dehydrogenase; Provisional	99.47
PRK06940	275	short chain dehydrogenase; Provisional	99.47
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.47
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.47
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.47
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.46
PRK07201	657	short chain dehydrogenase; Provisional	99.46
PRK06484	520	short chain dehydrogenase; Validated	99.46
PRK07577	234	short chain dehydrogenase; Provisional	99.46
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.46
PRK07578	199	short chain dehydrogenase; Provisional	99.45
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.45
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.45
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.45
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.45
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.45
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.44
KOG1208	314	consensus Dehydrogenases with different specificit	99.44
PRK06198	260	short chain dehydrogenase; Provisional	99.44
KOG0725	270	consensus Reductases with broad range of substrate	99.44
PRK05599	246	hypothetical protein; Provisional	99.43
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.43
PRK08017	256	oxidoreductase; Provisional	99.42
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.42
PRK08862	227	short chain dehydrogenase; Provisional	99.42
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.41
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.41
PRK07832	272	short chain dehydrogenase; Provisional	99.41
PRK06924	251	short chain dehydrogenase; Provisional	99.41
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PLN02503	605	fatty acyl-CoA reductase 2	99.41
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.41
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.4
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.4
PRK07041	230	short chain dehydrogenase; Provisional	99.39
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.39
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.37
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.37
PRK06953	222	short chain dehydrogenase; Provisional	99.37
PLN00015	308	protochlorophyllide reductase	99.36
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.36
PRK07069	251	short chain dehydrogenase; Validated	99.35
COG1028	251	FabG Dehydrogenases with different specificities (	99.35
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.33
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.32
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.31
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.29
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.28
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.26
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.24
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.22
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.2
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.19
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.18
PRK06720	169	hypothetical protein; Provisional	99.12
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.05
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.99
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.99
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.98
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.92
COG2910	211	Putative NADH-flavin reductase [General function p	98.8
PRK08309	177	short chain dehydrogenase; Provisional	98.73
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.71
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.69
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.55
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.52
PTZ00325	321	malate dehydrogenase; Provisional	98.51
PRK09620	229	hypothetical protein; Provisional	98.47
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.45
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.43
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.35
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.35
KOG2774	366	consensus NAD dependent epimerase [General functio	98.34
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.33
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.32
PLN00106	323	malate dehydrogenase	98.31
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.26
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.21
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.2
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.16
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.93
PRK14982	340	acyl-ACP reductase; Provisional	97.91
PRK05086	312	malate dehydrogenase; Provisional	97.9
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.86
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.78
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.76
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.63
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.6
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.57
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.56
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.53
COG3268	382	Uncharacterized conserved protein [Function unknow	97.52
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.48
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.32
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.19
PRK09496	453	trkA potassium transporter peripheral membrane com	97.05
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.01
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.98
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.9
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.89
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.85
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.85
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.82
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.81
PF08547	157	CIA30: Complex I intermediate-associated protein 3	96.79
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.76
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.72
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.68
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.67
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.64
PRK05442	326	malate dehydrogenase; Provisional	96.62
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.58
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.58
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.5
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.48
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.47
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.46
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.42
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.41
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.39
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.39
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.37
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.36
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.32
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.31
PRK09496	453	trkA potassium transporter peripheral membrane com	96.31
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.25
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.22
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.21
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.2
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.19
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.15
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.13
PTZ00117	319	malate dehydrogenase; Provisional	96.1
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.09
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.09
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.09
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.07
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.02
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.0
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.99
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.97
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.94
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.92
PLN02602	350	lactate dehydrogenase	95.87
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.84
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.84
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.83
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.82
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.81
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.8
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.8
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.8
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.76
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.75
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.73
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.72
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.72
PRK06223	307	malate dehydrogenase; Reviewed	95.71
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.7
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.69
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	95.68
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.67
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.65
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.65
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.64
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.62
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.62
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.61
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.59
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.57
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.57
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.56
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.56
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.56
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.52
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.52
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.5
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.45
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.44
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	95.43
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.41
PRK08655	437	prephenate dehydrogenase; Provisional	95.39
PRK04148	134	hypothetical protein; Provisional	95.38
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.38
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	95.37
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.33
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.32
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	95.29
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.26
PLN00203	519	glutamyl-tRNA reductase	95.25
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.22
PRK13243	333	glyoxylate reductase; Reviewed	95.2
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	95.2
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.19
PLN02928	347	oxidoreductase family protein	95.18
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.17
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.15
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.09
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.06
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.03
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.02
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	94.97
PRK06849	389	hypothetical protein; Provisional	94.97
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.96
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.93
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	94.93
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	94.88
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.87
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.86
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	94.83
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.82
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.77
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	94.76
PLN02494	477	adenosylhomocysteinase	94.75
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.7
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.69
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	94.67
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.67
PRK07574	385	formate dehydrogenase; Provisional	94.65
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	94.64
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	94.63
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.56
PLN03139	386	formate dehydrogenase; Provisional	94.56
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.53
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	94.53
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	94.53
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.52
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.51
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.47
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.46
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.45
PLN02383	344	aspartate semialdehyde dehydrogenase	94.45
PRK10669	558	putative cation:proton antiport protein; Provision	94.38
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	94.38
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	94.38
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.38
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.37
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.3
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.26
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.25
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.24
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.19
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	94.18
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.16
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.13
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	94.09
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.09
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.09
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.08
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.08
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.0
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	93.91
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.9
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	93.9
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.9
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.87
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.85
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	93.83
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.82
PRK08328	231	hypothetical protein; Provisional	93.8
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.8
PRK06487	317	glycerate dehydrogenase; Provisional	93.79
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	93.79
PRK12480	330	D-lactate dehydrogenase; Provisional	93.76
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	93.75
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.75
PLN02178	375	cinnamyl-alcohol dehydrogenase	93.72

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=9.1e-27  Score=225.12  Aligned_cols=255  Identities=17%  Similarity=0.118  Sum_probs=201.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATAR  237 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~  237 (437)
                      |+||||||+|+||+|.|..|++.|++|+++|.....  +.....  .+.++++||.|.+.++++|+.  +|.|||.||..
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~   78 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI   78 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--cCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence            589999999999999999999999999999986552  222111  268999999999999999986  69999999975


Q ss_pred             CC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeec--CCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhh
Q 013761          238 ST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRA--GKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       238 ~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~--~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                      ..     .+.++++.|+.||.+|++++++++++-..+++  ..||...          .++...-.|..+.++||.+|+.
T Consensus        79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~----------~~PI~E~~~~~p~NPYG~sKlm  148 (329)
T COG1087          79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPT----------TSPISETSPLAPINPYGRSKLM  148 (329)
T ss_pred             ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCC----------CcccCCCCCCCCCCcchhHHHH
Confidence            43     26789999999999999999999998555543  3344322          1232333455578999999999


Q ss_pred             cccchhhhhcccccceeeeeeeccCcc------ce----------------e---------ccccCCCcc-------cHH
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGY------VE----------------L---------SKKLSLPLG-------CTL  352 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~------~~----------------i---------~~~~~~p~g-------~v~  352 (437)
                      .|.........++......|.||+-|-      .+                .         ..++..|+|       ||.
T Consensus       149 ~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~  228 (329)
T COG1087         149 SEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVD  228 (329)
T ss_pred             HHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehh
Confidence            999888888888888999999997661      00                0         012333444       899


Q ss_pred             HHHHHHHHHh---ccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhcccee
Q 013761          353 DRYEGLVLSV---GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRF  429 (437)
Q Consensus       353 D~~~gi~l~~---~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~f  429 (437)
                      |.++|+++++   ...|+..++|+|++.   ..|++|+++.+.++.|. ++.+.+.+.|++++.....|++|+++. ++|
T Consensus       229 DLA~aH~~Al~~L~~~g~~~~~NLG~G~---G~SV~evi~a~~~vtg~-~ip~~~~~RR~GDpa~l~Ad~~kA~~~-Lgw  303 (329)
T COG1087         229 DLADAHVLALKYLKEGGSNNIFNLGSGN---GFSVLEVIEAAKKVTGR-DIPVEIAPRRAGDPAILVADSSKARQI-LGW  303 (329)
T ss_pred             HHHHHHHHHHHHHHhCCceeEEEccCCC---ceeHHHHHHHHHHHhCC-cCceeeCCCCCCCCceeEeCHHHHHHH-hCC
Confidence            9999999998   345666788889887   57899999999999994 556667788999999999999999999 999


Q ss_pred             eccc
Q 013761          430 EPRR  433 (437)
Q Consensus       430 ep~~  433 (437)
                      +|+.
T Consensus       304 ~p~~  307 (329)
T COG1087         304 QPTY  307 (329)
T ss_pred             Cccc
Confidence            9987

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=5.8e-25  Score=211.77  Aligned_cols=257  Identities=14%  Similarity=0.137  Sum_probs=199.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccEEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNKIIY  232 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh  232 (437)
                      |++|||||+||||++.++.++.+.  .+|+.+|.-.-   .+.+..+  .++..|+++||.|.+.+.++++.  +|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            579999999999999999999976  45788887543   2233333  34899999999999999999995  799999


Q ss_pred             eccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCC--ceeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          233 CATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNN--KLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       233 ~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gv--kl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      .|+-.+.+     +..++++|+.||++|++|++++..  ++.+++... ||.-...        .-..+.-.|-.+-++|
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~--------~~~FtE~tp~~PsSPY  152 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD--------DDAFTETTPYNPSSPY  152 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC--------CCCcccCCCCCCCCCc
Confidence            99976543     678999999999999999999985  688888654 4421111        0011222344456889


Q ss_pred             hhhhhhcccchhhhhcccccceeeeeeeccCcccee---------c---cccCCCc---c-------cHHHHHHHHHHHh
Q 013761          305 VAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------S---KKLSLPL---G-------CTLDRYEGLVLSV  362 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------~---~~~~~p~---g-------~v~D~~~gi~l~~  362 (437)
                      .++|.++..+...+...++.++...++.|.||+-..         .   ....+|+   |       ||.|.+.|+.+.+
T Consensus       153 SASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl  232 (340)
T COG1088         153 SASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVL  232 (340)
T ss_pred             chhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHH
Confidence            999999999999999999999999999999993221         1   1112222   2       8999999999998


Q ss_pred             --ccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceec----ccCCCcccCCCCCCCCCHHHHhhccceeecc
Q 013761          363 --GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVR----VPFSSFRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       363 --~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~----iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                        +..||.|+|.++++     .+-.|+++.|++.+|.....    |.|-..||+.+..+.+|.+||+.. ++|.|.
T Consensus       233 ~kg~~GE~YNIgg~~E-----~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~e-LgW~P~  302 (340)
T COG1088         233 TKGKIGETYNIGGGNE-----RTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRE-LGWRPQ  302 (340)
T ss_pred             hcCcCCceEEeCCCcc-----chHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhh-cCCCcC
Confidence              45699998865554     35689999999999954332    788889999999999999999887 899984

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.92  E-value=3.7e-23  Score=209.40  Aligned_cols=259  Identities=15%  Similarity=0.141  Sum_probs=185.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--------CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--------PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--------~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      +++|+|||||||||||++|+++|+++|++|++++|....  ......        ...+.++.+|+.|.+.+.++++++|
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            567899999999999999999999999999999986431  111110        1357889999999999999999999


Q ss_pred             EEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          229 KIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       229 ~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      +|||+|+....     .+...+++|+.|+.+++++|++.+++ +.++++. .|+...   +..+.++       .+..+.
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~---~~~~~e~-------~~~~p~  162 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHP---DLPKIEE-------RIGRPL  162 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCC---CCCCCCC-------CCCCCC
Confidence            99999997542     24567999999999999999999985 6666532 233211   0111111       122345


Q ss_pred             chhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------e-----c-----cccCC--------CcccHHHHH
Q 013761          302 QDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L-----S-----KKLSL--------PLGCTLDRY  355 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i-----~-----~~~~~--------p~g~v~D~~  355 (437)
                      +.|+.+|..++.....+..+++..++..|+++.||...        +     .     ..+..        +..|++|++
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a  242 (348)
T PRK15181        163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVI  242 (348)
T ss_pred             ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHH
Confidence            78999999999888777777788889999988888421        0     0     01111        112899999


Q ss_pred             HHHHHHhc-c----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCc-----eecccCCCcccCCCCCCCCCHHHHhhc
Q 013761          356 EGLVLSVG-G----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFC-----RVRVPFSSFRPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       356 ~gi~l~~~-~----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~-----~v~iP~~~~r~~~~~~~~ld~~ki~~~  425 (437)
                      +++++++. .    .++.|+|  +++.   .++++|+++.+.+..+..     ...+.+..+++.......+|++|+++.
T Consensus       243 ~a~~~~~~~~~~~~~~~~yni--~~g~---~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  317 (348)
T PRK15181        243 QANLLSATTNDLASKNKVYNV--AVGD---RTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTF  317 (348)
T ss_pred             HHHHHHHhcccccCCCCEEEe--cCCC---cEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHH
Confidence            99988763 1    4566755  5543   578999999999887621     112333444555556678999999987


Q ss_pred             cceeeccc
Q 013761          426 TIRFEPRR  433 (437)
Q Consensus       426 gi~fep~~  433 (437)
                       ++|.|+.
T Consensus       318 -lGw~P~~  324 (348)
T PRK15181        318 -LSYEPEF  324 (348)
T ss_pred             -hCCCCCC
Confidence             7899975

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.92  E-value=3.3e-23  Score=208.89  Aligned_cols=257  Identities=18%  Similarity=0.186  Sum_probs=179.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC--------CCCeEEEEecCCCHHHHHHHHhc--cc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML--------PRSVEIVLGDVGDPCTLKAAVEN--CN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~--------~~~v~~v~~Dltd~~~v~~a~~~--~D  228 (437)
                      |+||||||+||||++|+++|+++|++|++++|+.+.   .....+        ...+.++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999997531   111111        23588999999999999999986  59


Q ss_pred             EEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCC----ceeeeecC-CcchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNN----KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gv----kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +|||+|+.....     ....+++|+.|+.+++++|.++++    ++.++++. .||....   ..+.+.       .|.
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~---~~~~E~-------~~~  150 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQE---IPQNET-------TPF  150 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCC---CCCCCC-------CCC
Confidence            999999975422     345778999999999999999875    35555532 2331110   011121       233


Q ss_pred             cccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce----e-------------ccccCC---------CcccHH
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE----L-------------SKKLSL---------PLGCTL  352 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~----i-------------~~~~~~---------p~g~v~  352 (437)
                      .+.+.|+.+|..++.....+..+++.....+++++.||...    +             ......         ...||+
T Consensus       151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~  230 (343)
T TIGR01472       151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK  230 (343)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence            34678999999999888777777777777778888766321    0             000111         113999


Q ss_pred             HHHHHHHHHhcc-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCcee------------------cccC--CCcccCC
Q 013761          353 DRYEGLVLSVGG-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRV------------------RVPF--SSFRPVK  411 (437)
Q Consensus       353 D~~~gi~l~~~~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v------------------~iP~--~~~r~~~  411 (437)
                      |+++++++++.. .++.|+  ++++.   .++++|+++.+.+..|....                  .+++  ...++.+
T Consensus       231 D~a~a~~~~~~~~~~~~yn--i~~g~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (343)
T TIGR01472       231 DYVEAMWLMLQQDKPDDYV--IATGE---THSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTE  305 (343)
T ss_pred             HHHHHHHHHHhcCCCccEE--ecCCC---ceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCc
Confidence            999999998853 334564  45554   57899999999999884210                  1111  2235555


Q ss_pred             CCCCCCCHHHHhhccceeecccC
Q 013761          412 PDDPPMDPFLVHTMTIRFEPRRQ  434 (437)
Q Consensus       412 ~~~~~ld~~ki~~~gi~fep~~~  434 (437)
                      .....+|++|+++. ++|+|+..
T Consensus       306 ~~~~~~d~~k~~~~-lgw~p~~~  327 (343)
T TIGR01472       306 VDLLLGDATKAKEK-LGWKPEVS  327 (343)
T ss_pred             cchhcCCHHHHHHh-hCCCCCCC
Confidence            55667899999998 89999863

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.91  E-value=8.8e-23  Score=205.46  Aligned_cols=258  Identities=16%  Similarity=0.207  Sum_probs=183.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC-------CCCeEEEEecCCCHHHHHHHHhc--
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML-------PRSVEIVLGDVGDPCTLKAAVEN--  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~-------~~~v~~v~~Dltd~~~v~~a~~~--  226 (437)
                      ..+|+||||||+||||++|+++|+++|++|++++|+.+.   .....+       ...+.++.+|++|.+++.++++.  
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            567899999999999999999999999999999986531   111111       23578999999999999999986  


Q ss_pred             ccEEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCC------ceeeeecC-CcchhhhhhhhhccCCCCccee
Q 013761          227 CNKIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNN------KLAQLRAG-KSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 ~D~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gv------kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                      +|+|||+||....     .+...+++|+.|+.++++++++.++      ++.++++. .|+...    ..+.++      
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~----~~~~E~------  153 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTP----PPQSET------  153 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCC----CCCCCC------
Confidence            5999999997532     2455789999999999999998886      34444422 232110    011121      


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------e---------ccccCC---------Cc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L---------SKKLSL---------PL  348 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i---------~~~~~~---------p~  348 (437)
                       .|..+.+.|+.+|..++.....+..+++.....+++++.||...        +         .....+         ..
T Consensus       154 -~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~  232 (340)
T PLN02653        154 -TPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDW  232 (340)
T ss_pred             -CCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecc
Confidence             22334578999999999988777777777677788888665311        0         001111         12


Q ss_pred             ccHHHHHHHHHHHhcc-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCc---eecccCCCcccCCCCCCCCCHHHHhh
Q 013761          349 GCTLDRYEGLVLSVGG-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFC---RVRVPFSSFRPVKPDDPPMDPFLVHT  424 (437)
Q Consensus       349 g~v~D~~~gi~l~~~~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~---~v~iP~~~~r~~~~~~~~ld~~ki~~  424 (437)
                      .|++|+++++++++.. .++.|+|  +++.   .++++|+++.+.+..|..   .+.+....+++.......+|.+|+++
T Consensus       233 i~v~D~a~a~~~~~~~~~~~~yni--~~g~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  307 (340)
T PLN02653        233 GFAGDYVEAMWLMLQQEKPDDYVV--ATEE---SHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKARE  307 (340)
T ss_pred             eeHHHHHHHHHHHHhcCCCCcEEe--cCCC---ceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHH
Confidence            3999999999998853 3455655  5543   468999999999998842   23333334466666667889999999


Q ss_pred             ccceeeccc
Q 013761          425 MTIRFEPRR  433 (437)
Q Consensus       425 ~gi~fep~~  433 (437)
                      . ++|+|+.
T Consensus       308 ~-lgw~p~~  315 (340)
T PLN02653        308 V-LGWKPKV  315 (340)
T ss_pred             H-hCCCCCC
Confidence            8 8999985

>PLN02214 cinnamoyl-CoA reductase

Probab=99.91  E-value=1.1e-22  Score=205.67  Aligned_cols=263  Identities=16%  Similarity=0.062  Sum_probs=184.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHhhC---CCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDML---PRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +++|+||||||+||||++|+++|+++|++|++++|+.+..   ....+   ...+.++.+|++|.+++.++++++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            4678999999999999999999999999999999976521   11122   23588899999999999999999999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhh
Q 013761          233 CATARSTITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKY  309 (437)
Q Consensus       233 ~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~  309 (437)
                      +|+.....+.+.+++|+.|+.++++++++.+++ +.++++.  .|+.........+.+..... ...|..+...|+.+|.
T Consensus        88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~-~~~~~~p~~~Y~~sK~  166 (342)
T PLN02214         88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSD-LDFCKNTKNWYCYGKM  166 (342)
T ss_pred             ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCC-hhhccccccHHHHHHH
Confidence            999876667889999999999999999999985 6666542  23311100001223332100 0012224567999999


Q ss_pred             hcccchhhhhcccccceeeeeeeccCcccee---------------ccccC-----CCcccHHHHHHHHHHHhcc--CCc
Q 013761          310 DAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------------SKKLS-----LPLGCTLDRYEGLVLSVGG--NGR  367 (437)
Q Consensus       310 a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------------~~~~~-----~p~g~v~D~~~gi~l~~~~--~Ge  367 (437)
                      .++.....+..+++..+...++++.||....               .....     ....||+|+++++++++..  .++
T Consensus       167 ~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~~g  246 (342)
T PLN02214        167 VAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASG  246 (342)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcccCC
Confidence            9999988877778888888888888774210               00001     1223899999999999953  356


Q ss_pred             EEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCC--cccCCCCCCCCCHHHHhhccceeecc
Q 013761          368 SYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSS--FRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       368 ~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~--~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      +|++.  +.    ..+++|+++.+.+..+.  ..+|...  .++.......+|.+|+++  ++|+|+
T Consensus       247 ~yn~~--~~----~~~~~el~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~k~~~--LG~~p~  303 (342)
T PLN02214        247 RYLLA--ES----ARHRGEVVEILAKLFPE--YPLPTKCKDEKNPRAKPYKFTNQKIKD--LGLEFT  303 (342)
T ss_pred             cEEEe--cC----CCCHHHHHHHHHHHCCC--CCCCCCCccccCCCCCccccCcHHHHH--cCCccc
Confidence            78763  22    35799999999998752  2344322  223334445689999985  677773

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.90  E-value=5e-22  Score=207.72  Aligned_cols=267  Identities=15%  Similarity=0.075  Sum_probs=182.8

Q ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---H---------------HHHh----hCCCCeEEEEec
Q 013761          156 IPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---Q---------------EVVD----MLPRSVEIVLGD  213 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~---------------~~~~----~~~~~v~~v~~D  213 (437)
                      .+.+++|+||||||+||||++|+++|+++|++|++++|...   .               +.+.    ....++.++.+|
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD  121 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence            34478899999999999999999999999999999875321   0               0000    012368899999


Q ss_pred             CCCHHHHHHHHhc--ccEEEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCc--eeeeecC-Ccchhhhh
Q 013761          214 VGDPCTLKAAVEN--CNKIIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNK--LAQLRAG-KSSKSKLL  280 (437)
Q Consensus       214 ltd~~~v~~a~~~--~D~VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvk--l~~l~~~-~~g~sk~~  280 (437)
                      |+|.+.+.+++++  +|+|||+|+.....        +...+++|+.|+.++++++++.+++  +.+.++. .||.... 
T Consensus       122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~-  200 (442)
T PLN02572        122 ICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI-  200 (442)
T ss_pred             CCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC-
Confidence            9999999999985  79999999764322        1345789999999999999999863  6666543 3442211 


Q ss_pred             hhhhccCCCCc-------ceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee-------------
Q 013761          281 LAKFKSADSLN-------GWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL-------------  340 (437)
Q Consensus       281 ~~k~v~~ssl~-------~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i-------------  340 (437)
                         .+.+..+.       .....|..+.+.|+.+|..++.....+...++..+...|+++.||....             
T Consensus       201 ---~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~  277 (442)
T PLN02572        201 ---DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLD  277 (442)
T ss_pred             ---CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccC
Confidence               01111110       0001233456789999999999888888888999999999998885310             


Q ss_pred             ------------------ccccCC--------CcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHHHHH
Q 013761          341 ------------------SKKLSL--------PLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYFARF  391 (437)
Q Consensus       341 ------------------~~~~~~--------p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~~~i  391 (437)
                                        .+.+..        ...||+|+++++++++..   .|+.+++|+++.    .++++|+++.+
T Consensus       278 ~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~----~~si~el~~~i  353 (442)
T PLN02572        278 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTE----QFSVNELAKLV  353 (442)
T ss_pred             cccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCC----ceeHHHHHHHH
Confidence                              011111        112999999999998852   354455666543    47899999999


Q ss_pred             Hhh---hCCceecccCCC--cccCCCCCCCCCHHHHhhccceeeccc
Q 013761          392 STK---VGFCRVRVPFSS--FRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       392 ~~~---~G~~~v~iP~~~--~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      .+.   +|.. +.+.+..  .+........+|..|++.  ++|+|+.
T Consensus       354 ~~~~~~~g~~-~~~~~~p~~~~~~~~~~~~~d~~k~~~--LGw~p~~  397 (442)
T PLN02572        354 TKAGEKLGLD-VEVISVPNPRVEAEEHYYNAKHTKLCE--LGLEPHL  397 (442)
T ss_pred             HHHHHhhCCC-CCeeeCCCCcccccccccCccHHHHHH--cCCCCCC
Confidence            998   7742 2221111  122233456789999985  7899974

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.89  E-value=6.4e-23  Score=196.16  Aligned_cols=259  Identities=16%  Similarity=0.083  Sum_probs=196.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ..+++|+||||+||||+|||++|..+|++|+++|.-...  ......  ...++.+.-|+.     ..++.++|.|||+|
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~-----~pl~~evD~IyhLA   99 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVV-----EPLLKEVDQIYHLA   99 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeech-----hHHHHHhhhhhhhc
Confidence            456899999999999999999999999999999975442  111111  235566666664     45889999999999


Q ss_pred             cCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeec-CCcchhhhhhhhhcc-CCCCcceeeccCcccchhhhh
Q 013761          235 TARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRA-GKSSKSKLLLAKFKS-ADSLNGWEVRQGTYFQDVVAF  307 (437)
Q Consensus       235 g~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~-~~~g~sk~~~~k~v~-~ssl~~~i~rP~~~~~~y~~s  307 (437)
                      +..++.     +.+++.+|+.|+.+++..|++.+.++.+.++ ..||..      ... ..+..+--+.|..+.+.|..+
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp------~~hpq~e~ywg~vnpigpr~cydeg  173 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDP------LVHPQVETYWGNVNPIGPRSCYDEG  173 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCc------ccCCCccccccccCcCCchhhhhHH
Confidence            987654     5678999999999999999999988776664 345531      111 122233346677788889999


Q ss_pred             hhhcccchhhhhcccccceeeeeeeccCccce------ec---------c-ccC-CCcc-------cHHHHHHHHHHHhc
Q 013761          308 KYDAGMDAKFELSETGDAVFSGYVFTRGGYVE------LS---------K-KLS-LPLG-------CTLDRYEGLVLSVG  363 (437)
Q Consensus       308 k~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------i~---------~-~~~-~p~g-------~v~D~~~gi~l~~~  363 (437)
                      |..++.++..+..+.+..+..+|+|+-||...      +.         . .+. +..|       ||.|+++|++..++
T Consensus       174 Kr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~  253 (350)
T KOG1429|consen  174 KRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLME  253 (350)
T ss_pred             HHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhc
Confidence            99999999999999999999999999998321      00         0 110 1111       89999999999997


Q ss_pred             cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeecccC
Q 013761          364 GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRRQ  434 (437)
Q Consensus       364 ~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~~  434 (437)
                      ++- +-.+|+|++.   ..|+.|+++++.+..|- ...+.+..--++++.....|+.+|++. ++|+|+..
T Consensus       254 s~~-~~pvNiGnp~---e~Tm~elAemv~~~~~~-~s~i~~~~~~~Ddp~kR~pDit~ake~-LgW~Pkv~  318 (350)
T KOG1429|consen  254 SDY-RGPVNIGNPG---EFTMLELAEMVKELIGP-VSEIEFVENGPDDPRKRKPDITKAKEQ-LGWEPKVS  318 (350)
T ss_pred             CCC-cCCcccCCcc---ceeHHHHHHHHHHHcCC-CcceeecCCCCCCccccCccHHHHHHH-hCCCCCCc
Confidence            763 3447889886   67899999999998762 334556666777888899999999998 99999863

>PLN02686 cinnamoyl-CoA reductase

Probab=99.88  E-value=2.3e-21  Score=198.07  Aligned_cols=266  Identities=14%  Similarity=0.063  Sum_probs=184.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhC---------CCCeEEEEecCCCHHHHHHHHhcc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDML---------PRSVEIVLGDVGDPCTLKAAVENC  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~---------~~~v~~v~~Dltd~~~v~~a~~~~  227 (437)
                      .+++|+||||||+||||++|+++|+++|++|++++|+.+. ..+..+         ...+.++.+|++|.+++.++++++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~  129 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC  129 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence            4678999999999999999999999999999998887542 111111         125788999999999999999999


Q ss_pred             cEEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecC---Ccchh-hhhhhhhccCCCCcceeec
Q 013761          228 NKIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAG---KSSKS-KLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       228 D~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~---~~g~s-k~~~~k~v~~ssl~~~i~r  296 (437)
                      |+|||+|+.....     .....++|+.++.++++++.+. +++ +.++++.   .|+.. ......++.++.... .-.
T Consensus       130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~-~~~  208 (367)
T PLN02686        130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD-ESF  208 (367)
T ss_pred             cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC-hhh
Confidence            9999999875322     2456789999999999999886 675 5555432   22210 000001233332110 001


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee-------c----ccc-CCC-----cccHHHHHHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL-------S----KKL-SLP-----LGCTLDRYEGLV  359 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i-------~----~~~-~~p-----~g~v~D~~~gi~  359 (437)
                      |..+...|+.+|..++..+..+..+++..+...++++.||....       .    ..+ .+.     ..||+|++++++
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~  288 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEAHV  288 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHH
Confidence            22244679999999999887776777887787787777774210       0    011 111     238999999999


Q ss_pred             HHhcc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcc-cCCCCCCCCCHHHHhhccceeecc
Q 013761          360 LSVGG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFR-PVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       360 l~~~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r-~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      +++..     .|+.| |  +++.   .++++|+++.+.+.+|.+ +.+.+...+ +.++....+|..|++.+ ++|+|+
T Consensus       289 ~al~~~~~~~~~~~y-i--~~g~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~d~~~~~~d~~kl~~~-l~~~~~  359 (367)
T PLN02686        289 CVYEAMGNKTAFGRY-I--CFDH---VVSREDEAEELARQIGLP-INKIAGNSSSDDTPARFELSNKKLSRL-MSRTRR  359 (367)
T ss_pred             HHHhccCCCCCCCcE-E--EeCC---CccHHHHHHHHHHHcCCC-CCcCCCchhhcCCcccccccHHHHHHH-HHHhhh
Confidence            98852     34567 4  2222   478999999999999853 233333345 56777889999999998 899986

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.88  E-value=7.2e-21  Score=192.49  Aligned_cols=262  Identities=16%  Similarity=0.088  Sum_probs=174.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh--CCCCeEEEEecCCCHHHHHHHHhc--ccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM--LPRSVEIVLGDVGDPCTLKAAVEN--CNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~--~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh  232 (437)
                      +++|+||||||+||||++++++|+++|++|++++|+...  .....  ....+.++.+|++|.+++.+++++  +|+|||
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            467899999999999999999999999999999987652  11111  223577899999999999999986  499999


Q ss_pred             eccCCCC-----chhhHHHHHHHHHHHHHHHHHhcC-Cc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          233 CATARST-----ITGDLFRVDYQGVYNVTKAFQDFN-NK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       233 ~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~g-vk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      +||....     .+...+++|+.|+.++++++.+.+ ++ +.++++. .|+.....  ..+.+       ..|..+.++|
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~--~~~~e-------~~~~~p~~~Y  152 (349)
T TIGR02622        82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWV--WGYRE-------TDPLGGHDPY  152 (349)
T ss_pred             CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCC--CCCcc-------CCCCCCCCcc
Confidence            9996422     256689999999999999998876 43 5555432 22211000  00111       1122345678


Q ss_pred             hhhhhhcccchhhhhccc-------ccceeeeeeeccCcccee--------------c-cccCC-------CcccHHHHH
Q 013761          305 VAFKYDAGMDAKFELSET-------GDAVFSGYVFTRGGYVEL--------------S-KKLSL-------PLGCTLDRY  355 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~-------~~~v~~g~~~~~~G~~~i--------------~-~~~~~-------p~g~v~D~~  355 (437)
                      +.+|...+........++       +..+...++++.||....              . ..+.+       ...|++|++
T Consensus       153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a  232 (349)
T TIGR02622       153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPL  232 (349)
T ss_pred             hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHH
Confidence            889988887765443332       566667777777663210              0 01111       123899999


Q ss_pred             HHHHHHhcc-------CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccC--CCcccCCCCCCCCCHHHHhhcc
Q 013761          356 EGLVLSVGG-------NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPF--SSFRPVKPDDPPMDPFLVHTMT  426 (437)
Q Consensus       356 ~gi~l~~~~-------~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~--~~~r~~~~~~~~ld~~ki~~~g  426 (437)
                      +++++++..       .++.|+|  +++.+ +..+..++++.+.+..+-..+.++.  ...++.......+|++|++++ 
T Consensus       233 ~a~~~~~~~~~~~~~~~~~~yni--~s~~~-~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-  308 (349)
T TIGR02622       233 SGYLLLAEKLFTGQAEFAGAWNF--GPRAS-DNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTL-  308 (349)
T ss_pred             HHHHHHHHHHhhcCccccceeee--CCCcc-cCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHH-
Confidence            999987631       2456655  54321 2578999999998875522222222  234455555668899999998 


Q ss_pred             ceeeccc
Q 013761          427 IRFEPRR  433 (437)
Q Consensus       427 i~fep~~  433 (437)
                      ++|.|+.
T Consensus       309 lgw~p~~  315 (349)
T TIGR02622       309 LGWHPRW  315 (349)
T ss_pred             hCCCCCC
Confidence            7899974

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.88  E-value=5.9e-21  Score=192.99  Aligned_cols=259  Identities=12%  Similarity=0.092  Sum_probs=172.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEE-EEecCCcHH---HHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccEEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVK-ALVRKADQE---VVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNKIIY  232 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~-~~~R~~~~~---~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh  232 (437)
                      +|+|||||||||||++|++.|+++|++|+ +++|.....   .....  ...+.++.+|++|.+++++++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            36899999999999999999999998755 445443211   11111  23578899999999999999985  799999


Q ss_pred             eccCCCC-----chhhHHHHHHHHHHHHHHHHHhc---------CC-ceeeeecC-CcchhhhhhhhhccCCCCcceeec
Q 013761          233 CATARST-----ITGDLFRVDYQGVYNVTKAFQDF---------NN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       233 ~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~---------gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      +||....     .+..++++|+.|+.++++++.+.         ++ ++.++++. .|+.... ....+.+.       .
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~-~~~~~~E~-------~  152 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS-TDDFFTET-------T  152 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC-CCCCcCCC-------C
Confidence            9997543     24678999999999999999763         33 35555432 2321100 00112221       1


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee---------c-----cccCC--------CcccHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------S-----KKLSL--------PLGCTLDR  354 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------~-----~~~~~--------p~g~v~D~  354 (437)
                      |..+.+.|+.+|..++.....+..+++..+...+.++.||....         .     ..+..        ...|++|+
T Consensus       153 ~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~  232 (355)
T PRK10217        153 PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDH  232 (355)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHH
Confidence            33346789999999998887777777777777777776663210         0     11110        12389999


Q ss_pred             HHHHHHHhcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceeccc-----------CCCcccCCCCCCCCCHHH
Q 013761          355 YEGLVLSVGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVP-----------FSSFRPVKPDDPPMDPFL  421 (437)
Q Consensus       355 ~~gi~l~~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP-----------~~~~r~~~~~~~~ld~~k  421 (437)
                      ++++..++..  .|+.|++  +++.   .++++|+++.+.+..|......|           +...++.......+|.+|
T Consensus       233 a~a~~~~~~~~~~~~~yni--~~~~---~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  307 (355)
T PRK10217        233 ARALYCVATTGKVGETYNI--GGHN---ERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASK  307 (355)
T ss_pred             HHHHHHHHhcCCCCCeEEe--CCCC---cccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHH
Confidence            9999988843  3566755  4443   46899999999998873211111           112233334455889999


Q ss_pred             Hhhccceeeccc
Q 013761          422 VHTMTIRFEPRR  433 (437)
Q Consensus       422 i~~~gi~fep~~  433 (437)
                      +++. ++|.|+.
T Consensus       308 ~~~~-lg~~p~~  318 (355)
T PRK10217        308 IARE-LGWLPQE  318 (355)
T ss_pred             HHHh-cCCCCcC
Confidence            9887 8899874

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=6.5e-21  Score=189.67  Aligned_cols=258  Identities=15%  Similarity=0.075  Sum_probs=173.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--H--HhhC---CCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--V--VDML---PRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~--~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      .+|+||||||+||||++|+++|+++|++|++++|+....  .  ....   ...+.++.+|++|.+.+.++++++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            357999999999999999999999999999999876421  1  1111   24688999999999999999999999999


Q ss_pred             eccCCCC---ch-hhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecCC---cchhhhhhhhhccCCCCcceeeccC---cc
Q 013761          233 CATARST---IT-GDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAGK---SSKSKLLLAKFKSADSLNGWEVRQG---TY  300 (437)
Q Consensus       233 ~Ag~~~~---~~-~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~~---~g~sk~~~~k~v~~ssl~~~i~rP~---~~  300 (437)
                      +|+....   .+ ..++++|+.|+.++++++.+. +++ +.++++..   |+.........+.++..    ..|.   ..
T Consensus        83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~----~~p~~~~~~  158 (322)
T PLN02662         83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWF----SDPAFCEES  158 (322)
T ss_pred             eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccC----CChhHhhcc
Confidence            9986432   22 368899999999999999887 764 55555421   22100000011222211    1121   11


Q ss_pred             cchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee----------c-----ccc----CCCcccHHHHHHHHHHH
Q 013761          301 FQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL----------S-----KKL----SLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------~-----~~~----~~p~g~v~D~~~gi~l~  361 (437)
                      ...|+.+|..++..+..+..+++..+...++++.||....          .     ...    .....|++|++++++.+
T Consensus       159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  238 (322)
T PLN02662        159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQA  238 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHH
Confidence            2468999998888887777777888888888887774210          0     000    01224899999999999


Q ss_pred             hccC--CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCc-ccCCCCCCCCCHHHHhhccceeec
Q 013761          362 VGGN--GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSF-RPVKPDDPPMDPFLVHTMTIRFEP  431 (437)
Q Consensus       362 ~~~~--Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~-r~~~~~~~~ld~~ki~~~gi~fep  431 (437)
                      +..+  ++.|++. + .    .++++|+++.+.+..+.  ..+|.... +........+|.+|++.  ++|+|
T Consensus       239 ~~~~~~~~~~~~~-g-~----~~s~~e~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~d~~k~~~--lg~~~  301 (322)
T PLN02662        239 FEIPSASGRYCLV-E-R----VVHYSEVVKILHELYPT--LQLPEKCADDKPYVPTYQVSKEKAKS--LGIEF  301 (322)
T ss_pred             hcCcCcCCcEEEe-C-C----CCCHHHHHHHHHHHCCC--CCCCCCCCCccccccccccChHHHHH--hCCcc
Confidence            8532  3467553 2 2    46899999999988763  23343211 11133456799999996  45554

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.87  E-value=3.8e-21  Score=190.20  Aligned_cols=259  Identities=18%  Similarity=0.183  Sum_probs=171.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH----HHhhC---CCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE----VVDML---PRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~----~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      .+++|+||||+||||++|++.|+.+||+|++.+|+++++    .+..+   ..++..+..||+|++++++++++||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            578999999999999999999999999999999998742    23333   34689999999999999999999999999


Q ss_pred             eccCCCCchh----hHHHHHHHHHHHHHHHHHhcC-Cc-eeeeecCC--cch-hhhhhhhhccCCCCcceeeccCccc--
Q 013761          233 CATARSTITG----DLFRVDYQGVYNVTKAFQDFN-NK-LAQLRAGK--SSK-SKLLLAKFKSADSLNGWEVRQGTYF--  301 (437)
Q Consensus       233 ~Ag~~~~~~~----~~~~vNv~gt~~l~~aa~~~g-vk-l~~l~~~~--~g~-sk~~~~k~v~~ssl~~~i~rP~~~~--  301 (437)
                      .|........    +.++.++.|+.|++++|++.. || +.+-++-.  ... ....-...+.++...     +..+.  
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~ws-----d~~~~~~  159 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWS-----DLDFCRC  159 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCC-----cHHHHHh
Confidence            9998654422    799999999999999999988 65 33333110  000 000011223333221     11111  


Q ss_pred             --chhhhhhhhcccchhhhhcccccce---eeeeeeccCccceec-----------------cccCCCcccHHHHHHHHH
Q 013761          302 --QDVVAFKYDAGMDAKFELSETGDAV---FSGYVFTRGGYVELS-----------------KKLSLPLGCTLDRYEGLV  359 (437)
Q Consensus       302 --~~y~~sk~a~~~~~~~~~~~~~~~v---~~g~~~~~~G~~~i~-----------------~~~~~p~g~v~D~~~gi~  359 (437)
                        ..|..+|.-+++.++-+..+.+..+   .++.+++|.=.....                 .+..+..-+|+|++.+++
T Consensus       160 ~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv  239 (327)
T KOG1502|consen  160 KKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHV  239 (327)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHH
Confidence              3477888888998888888776543   444455543211100                 011111238999999999


Q ss_pred             HHhc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCccc--CCCCCCCCCHHHHhhcc-ceeec
Q 013761          360 LSVG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRP--VKPDDPPMDPFLVHTMT-IRFEP  431 (437)
Q Consensus       360 l~~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~--~~~~~~~ld~~ki~~~g-i~fep  431 (437)
                      ++++  ..+++|++..+.      ..+.|+++.+.+..-  .+.+|-..--.  .......++-.|++.+| +.|.|
T Consensus       240 ~a~E~~~a~GRyic~~~~------~~~~ei~~~l~~~~P--~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~  308 (327)
T KOG1502|consen  240 LALEKPSAKGRYICVGEV------VSIKEIADILRELFP--DYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRP  308 (327)
T ss_pred             HHHcCcccCceEEEecCc------ccHHHHHHHHHHhCC--CCCCCCCCCccccccccccccccHHHHhcccceecC
Confidence            9995  456789885433      347788887776542  33344222111  11222368999999997 66655

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.87  E-value=1.6e-20  Score=188.96  Aligned_cols=265  Identities=16%  Similarity=0.127  Sum_probs=175.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-H---HhhCC--CCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-V---VDMLP--RSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~---~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +++|+||||||+||||++|+++|+++|++|++++|+.+.. .   ...+.  ..+.++.+|++|.+++.++++++|+|||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            5678999999999999999999999999999998876421 1   11121  2588999999999999999999999999


Q ss_pred             eccCCCCc----hhhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecC-Ccchhhh-hhhhhccCCCCc--ceeeccCcccc
Q 013761          233 CATARSTI----TGDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAG-KSSKSKL-LLAKFKSADSLN--GWEVRQGTYFQ  302 (437)
Q Consensus       233 ~Ag~~~~~----~~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~-~~g~sk~-~~~k~v~~ssl~--~~i~rP~~~~~  302 (437)
                      +|+.....    ...++++|+.|+.++++++.+. +++ +.++++. .|+.... .....+.+....  ..+..+..+.+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  166 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW  166 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence            99964321    2346799999999999999886 454 5555542 2331110 000112222110  00111222467


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccce---e-------c-----cccC-------------CCcccHHHH
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE---L-------S-----KKLS-------------LPLGCTLDR  354 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~---i-------~-----~~~~-------------~p~g~v~D~  354 (437)
                      +|+.+|..++..+..+..+++..+...++++.||...   .       .     +.+.             .+..||+|+
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~  246 (338)
T PLN00198        167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDV  246 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHH
Confidence            7999999999988887777888888888888777421   0       0     0110             123489999


Q ss_pred             HHHHHHHhccC--CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeecc
Q 013761          355 YEGLVLSVGGN--GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       355 ~~gi~l~~~~~--Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      ++++++++...  ++.| +..+ .    .++++|+++.+.+..+.  .++|.............+|.+|++++  +|+|+
T Consensus       247 a~a~~~~~~~~~~~~~~-~~~~-~----~~s~~el~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~~--G~~p~  316 (338)
T PLN00198        247 CRAHIFLAEKESASGRY-ICCA-A----NTSVPELAKFLIKRYPQ--YQVPTDFGDFPSKAKLIISSEKLISE--GFSFE  316 (338)
T ss_pred             HHHHHHHhhCcCcCCcE-EEec-C----CCCHHHHHHHHHHHCCC--CCCCccccccCCCCccccChHHHHhC--Cceec
Confidence            99999988532  3457 3222 2    35799999999887652  12322111111123457899999985  88887


Q ss_pred             c
Q 013761          433 R  433 (437)
Q Consensus       433 ~  433 (437)
                      .
T Consensus       317 ~  317 (338)
T PLN00198        317 Y  317 (338)
T ss_pred             C
Confidence            4

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.87  E-value=6.4e-21  Score=199.00  Aligned_cols=256  Identities=14%  Similarity=0.097  Sum_probs=179.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh-C-CCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM-L-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~-~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .|+||||||+||||++|+++|+++|++|++++|....  ..... . ...++++.+|+.+.     ++.++|+|||+|+.
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa~  194 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLACP  194 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECcee
Confidence            4689999999999999999999999999999986321  11111 1 23578888898764     35679999999986


Q ss_pred             CCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhh
Q 013761          237 RST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       237 ~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                      ...     .+...+++|+.|+.+++++|+++++++.++++. .|+...   ...+.+...  ....|..+.+.|+.+|..
T Consensus       195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~---~~p~~E~~~--~~~~p~~p~s~Yg~SK~~  269 (436)
T PLN02166        195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPL---EHPQKETYW--GNVNPIGERSCYDEGKRT  269 (436)
T ss_pred             ccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCC---CCCCCcccc--ccCCCCCCCCchHHHHHH
Confidence            432     245689999999999999999999887777643 233211   011222211  112343445779999999


Q ss_pred             cccchhhhhcccccceeeeeeeccCccce------ec----------cccC-C-------CcccHHHHHHHHHHHhcc-C
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVE------LS----------KKLS-L-------PLGCTLDRYEGLVLSVGG-N  365 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------i~----------~~~~-~-------p~g~v~D~~~gi~l~~~~-~  365 (437)
                      ++.....+...++..+...|+++.||...      +.          ..+. +       ...||+|+++++..++.. .
T Consensus       270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~  349 (436)
T PLN02166        270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH  349 (436)
T ss_pred             HHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence            99988877777788888889888887421      00          0111 0       112899999999988853 3


Q ss_pred             CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          366 GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       366 Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++.|+  ++++.   .++++|+++.+.+..|.. ..+.+...++.+.....+|.+|++++ ++|+|+.
T Consensus       350 ~giyN--Igs~~---~~Si~ela~~I~~~~g~~-~~i~~~p~~~~~~~~~~~d~~Ka~~~-LGw~P~~  410 (436)
T PLN02166        350 VGPFN--LGNPG---EFTMLELAEVVKETIDSS-ATIEFKPNTADDPHKRKPDISKAKEL-LNWEPKI  410 (436)
T ss_pred             CceEE--eCCCC---cEeHHHHHHHHHHHhCCC-CCeeeCCCCCCCccccccCHHHHHHH-cCCCCCC
Confidence            44554  45553   578999999999999852 23333334445556678999999998 8999975

>PLN02427 UDP-apiose/xylose synthase

Probab=99.87  E-value=1.3e-20  Score=193.19  Aligned_cols=267  Identities=16%  Similarity=0.081  Sum_probs=177.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcHH-HHhh-----CCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQE-VVDM-----LPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~~-~~~~-----~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      .+.|+|||||||||||++|+++|+++ |++|++++|+.+.. ....     ...+++++.+|++|.+.+.++++++|+||
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            45678999999999999999999998 59999999875421 1111     12368999999999999999999999999


Q ss_pred             EeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCC-Cc----c------e-
Q 013761          232 YCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADS-LN----G------W-  293 (437)
Q Consensus       232 h~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ss-l~----~------~-  293 (437)
                      |+|+....     .+.+.+..|+.++.+++++|++.+.++.++++. .|+....   ..+.+.. +.    .      + 
T Consensus        92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~---~~~~e~~p~~~~~~~~~~~e~~~  168 (386)
T PLN02427         92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG---SFLPKDHPLRQDPAFYVLKEDES  168 (386)
T ss_pred             EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcC---CCCCccccccccccccccccccc
Confidence            99997542     134567899999999999999888667666643 2332110   0111110 00    0      0 


Q ss_pred             ee--cc-CcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee--------------------c-----cccC
Q 013761          294 EV--RQ-GTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL--------------------S-----KKLS  345 (437)
Q Consensus       294 i~--rP-~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i--------------------~-----~~~~  345 (437)
                      ..  .| ..+.+.|+.+|..++.....+..+++..+...|+++.||....                    .     ..+.
T Consensus       169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (386)
T PLN02427        169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK  248 (386)
T ss_pred             ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence            00  00 0123569999999988887666667777777887777663210                    0     0000


Q ss_pred             --------CCcccHHHHHHHHHHHhcc----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce---------ecccC
Q 013761          346 --------LPLGCTLDRYEGLVLSVGG----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR---------VRVPF  404 (437)
Q Consensus       346 --------~p~g~v~D~~~gi~l~~~~----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~---------v~iP~  404 (437)
                              ....||+|+++++++++..    .|+.|++  +++.  +.++++|+++.+.+..|...         +.+|.
T Consensus       249 ~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni--~~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~  324 (386)
T PLN02427        249 LVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNV--GNPN--NEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSS  324 (386)
T ss_pred             EECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEe--CCCC--CCccHHHHHHHHHHHhccccccccccccccccCc
Confidence                    0123899999999998853    3566755  4321  14789999999999887311         11221


Q ss_pred             CCcc---cCCCCCCCCCHHHHhhccceeeccc
Q 013761          405 SSFR---PVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       405 ~~~r---~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ..+.   ..+.....+|.+|+++. ++|+|+.
T Consensus       325 ~~~~~~~~~~~~~~~~d~~k~~~~-lGw~p~~  355 (386)
T PLN02427        325 KEFYGEGYDDSDKRIPDMTIINKQ-LGWNPKT  355 (386)
T ss_pred             ccccCccccchhhccCCHHHHHHh-cCCCcCc
Confidence            1111   12345568899999998 8999975

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.87  E-value=1.5e-20  Score=189.89  Aligned_cols=263  Identities=11%  Similarity=0.072  Sum_probs=175.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcHHHHhhC-CCCeEEEEecCC-CHHHHHHHHhcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDML-PRSVEIVLGDVG-DPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dlt-d~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ||+||||||+||||++|+++|+++ |++|++++|+... ..... ...+.++.+|++ +.+.+.++++++|+|||+|+..
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~   79 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR-LGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIA   79 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH-HHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence            368999999999999999999986 6999999986542 11112 236899999998 7788889999999999999864


Q ss_pred             CC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeecc-Ccccchhhhhhhh
Q 013761          238 ST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQ-GTYFQDVVAFKYD  310 (437)
Q Consensus       238 ~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP-~~~~~~y~~sk~a  310 (437)
                      ..     .+...+++|+.|+.+++++|++.+.++.+.++. .|+..+   ...+.++..+.. ..| ..+...|+.+|..
T Consensus        80 ~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~---~~~~~ee~~~~~-~~~~~~p~~~Y~~sK~~  155 (347)
T PRK11908         80 TPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCP---DEEFDPEASPLV-YGPINKPRWIYACSKQL  155 (347)
T ss_pred             ChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCC---CcCcCccccccc-cCcCCCccchHHHHHHH
Confidence            32     245678999999999999999988777666643 233211   011222211100 011 1234579999999


Q ss_pred             cccchhhhhcccccceeeeeeeccCcccee----------------------ccccCC--------CcccHHHHHHHHHH
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVEL----------------------SKKLSL--------PLGCTLDRYEGLVL  360 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------------------~~~~~~--------p~g~v~D~~~gi~l  360 (437)
                      ++.....+..+++..+...|+++.||....                      .+.+.+        ...|++|++++++.
T Consensus       156 ~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~  235 (347)
T PRK11908        156 MDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMK  235 (347)
T ss_pred             HHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHH
Confidence            888887766667777788888777663210                      001111        12389999999999


Q ss_pred             Hhcc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCC-cee-----cccCCCcc------c--CCCCCCCCCHHH
Q 013761          361 SVGG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGF-CRV-----RVPFSSFR------P--VKPDDPPMDPFL  421 (437)
Q Consensus       361 ~~~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~-~~v-----~iP~~~~r------~--~~~~~~~ld~~k  421 (437)
                      ++..     .|+.|++  +++.  ...|++|+++.+.+.+|. +.+     .+++....      +  ........|++|
T Consensus       236 ~~~~~~~~~~g~~yni--~~~~--~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  311 (347)
T PRK11908        236 IIENKDGVASGKIYNI--GNPK--NNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDN  311 (347)
T ss_pred             HHhCccccCCCCeEEe--CCCC--CCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChHH
Confidence            8853     2567766  4321  146899999999998883 221     11111100      0  112344568999


Q ss_pred             Hhhccceeeccc
Q 013761          422 VHTMTIRFEPRR  433 (437)
Q Consensus       422 i~~~gi~fep~~  433 (437)
                      ++++ ++|.|+.
T Consensus       312 ~~~~-lGw~p~~  322 (347)
T PRK11908        312 TMQE-LGWAPKT  322 (347)
T ss_pred             HHHH-cCCCCCC
Confidence            9988 8999974

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=1.8e-20  Score=187.16  Aligned_cols=258  Identities=15%  Similarity=0.111  Sum_probs=172.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh---h---CCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD---M---LPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~---~---~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      .+|+||||||+||||++|+++|+++|++|+++.|+.+. +...   .   ....+.++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            47899999999999999999999999999999987652 1111   1   124688999999999999999999999999


Q ss_pred             eccCCCC----chhhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecCC---cchhhhhhhhhccCCCCcceeeccC---cc
Q 013761          233 CATARST----ITGDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAGK---SSKSKLLLAKFKSADSLNGWEVRQG---TY  300 (437)
Q Consensus       233 ~Ag~~~~----~~~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~~---~g~sk~~~~k~v~~ssl~~~i~rP~---~~  300 (437)
                      +|+....    ...+++++|+.|+.++++++++. +++ +.++++..   ++......+..+.++...    .|.   ..
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~----~p~~~~~~  159 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFS----DPSLCRET  159 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCC----ChHHhhcc
Confidence            9997432    12357899999999999999885 564 66655421   111100000112222111    111   12


Q ss_pred             cchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee---------c------ccc----CCCcccHHHHHHHHHHH
Q 013761          301 FQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------S------KKL----SLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------~------~~~----~~p~g~v~D~~~gi~l~  361 (437)
                      ...|+.+|..++..+..+..+++..+...++++.||....         .      ..+    .....|++|++++++.+
T Consensus       160 ~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~a  239 (322)
T PLN02986        160 KNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKA  239 (322)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHH
Confidence            3569999999998887777777777777777666663210         0      000    01123899999999999


Q ss_pred             hcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCC--CCCHHHHhhccceee
Q 013761          362 VGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDP--PMDPFLVHTMTIRFE  430 (437)
Q Consensus       362 ~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~--~ld~~ki~~~gi~fe  430 (437)
                      +..  .+++|++.   +.   ..+++|+++.+.+..+  .+.+|.. ..+.+....  .+|.+|++.+|+.|.
T Consensus       240 l~~~~~~~~yni~---~~---~~s~~e~~~~i~~~~~--~~~~~~~-~~~~~~~~~~~~~d~~~~~~lg~~~~  303 (322)
T PLN02986        240 LETPSANGRYIID---GP---IMSVNDIIDILRELFP--DLCIADT-NEESEMNEMICKVCVEKVKNLGVEFT  303 (322)
T ss_pred             hcCcccCCcEEEe---cC---CCCHHHHHHHHHHHCC--CCCCCCC-CccccccccCCccCHHHHHHcCCccc
Confidence            853  34578662   21   3689999999999876  2344443 122222222  489999988766554

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.87  E-value=1.3e-20  Score=197.08  Aligned_cols=257  Identities=15%  Similarity=0.110  Sum_probs=178.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H-HHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E-VVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~-~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+|+|||||||||||++|+++|+++|++|++++|....  + ..... ..+++++.+|+.+.     ++.++|+|||+|+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa  192 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC  192 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence            56899999999999999999999999999999875321  1 11111 24678888998775     3467999999998


Q ss_pred             CCCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhh
Q 013761          236 ARST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKY  309 (437)
Q Consensus       236 ~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~  309 (437)
                      ....     .+...+++|+.|+.+++++|++.++++.++++. .|+...   .....+...  ....|..+.+.|+.+|.
T Consensus       193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~---~~p~~E~~~--~~~~P~~~~s~Y~~SK~  267 (442)
T PLN02206        193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPL---QHPQVETYW--GNVNPIGVRSCYDEGKR  267 (442)
T ss_pred             ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCC---CCCCCcccc--ccCCCCCccchHHHHHH
Confidence            6532     245689999999999999999999887777653 233110   011112110  01224334577999999


Q ss_pred             hcccchhhhhcccccceeeeeeeccCccce------e---------c-cccCC--------CcccHHHHHHHHHHHhcc-
Q 013761          310 DAGMDAKFELSETGDAVFSGYVFTRGGYVE------L---------S-KKLSL--------PLGCTLDRYEGLVLSVGG-  364 (437)
Q Consensus       310 a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------i---------~-~~~~~--------p~g~v~D~~~gi~l~~~~-  364 (437)
                      .++.....+..+++..+...++++.||...      +         . ..+.+        ...|++|++++++.++.. 
T Consensus       268 ~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~  347 (442)
T PLN02206        268 TAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE  347 (442)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC
Confidence            999888777777788888888888777321      0         0 11111        113899999999988743 


Q ss_pred             CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          365 NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       365 ~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      .++.|++  +++.   .++++|+++.+.+..|. ..++.+...++.++....+|.+|++++ ++|+|+.
T Consensus       348 ~~g~yNI--gs~~---~~sl~Elae~i~~~~g~-~~~i~~~p~~~~~~~~~~~d~sKa~~~-LGw~P~~  409 (442)
T PLN02206        348 HVGPFNL--GNPG---EFTMLELAKVVQETIDP-NAKIEFRPNTEDDPHKRKPDITKAKEL-LGWEPKV  409 (442)
T ss_pred             CCceEEE--cCCC---ceeHHHHHHHHHHHhCC-CCceeeCCCCCCCccccccCHHHHHHH-cCCCCCC
Confidence            3445655  5543   46899999999999884 233444444444556678999999998 8999974

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.86  E-value=1.2e-20  Score=186.17  Aligned_cols=228  Identities=17%  Similarity=0.168  Sum_probs=153.0

Q ss_pred             EEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHHHHhhC-C-CCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC-
Q 013761          165 LVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEVVDML-P-RSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST-  239 (437)
Q Consensus       165 LVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~~~~~~-~-~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~-  239 (437)
                      |||||+||||++|+++|+++|  ++|.++++.......... . ....++.+||+|.+++.++++++|+|||+|++... 
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  799999987653221111 1 23349999999999999999999999999997543 


Q ss_pred             ---chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cchhhhhhhhhcc-CCCCcceeeccCcccchhhhhhhhccc
Q 013761          240 ---ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SSKSKLLLAKFKS-ADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       240 ---~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g~sk~~~~k~v~-~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                         ..+.++++|+.||.+++++|++++++ +.+.++.. .+. .+....+.. .+..+    .|..+.+.|..+|..+|+
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~-~~~~~~~~~~dE~~~----~~~~~~~~Y~~SK~~AE~  155 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFD-NYKGDPIINGDEDTP----YPSSPLDPYAESKALAEK  155 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEe-ccCCCCcccCCcCCc----ccccccCchHHHHHHHHH
Confidence               25669999999999999999999997 54544321 111 000011221 11111    233366789999999998


Q ss_pred             chhhhhc---ccc--cceeeeeeeccCccce---------ec-cc-c---------CCCcccHHHHHHHHHHHhc-----
Q 013761          314 DAKFELS---ETG--DAVFSGYVFTRGGYVE---------LS-KK-L---------SLPLGCTLDRYEGLVLSVG-----  363 (437)
Q Consensus       314 ~~~~~~~---~~~--~~v~~g~~~~~~G~~~---------i~-~~-~---------~~p~g~v~D~~~gi~l~~~-----  363 (437)
                      ..+....   +.+  ...+..|+...||...         .. .. .         .....||+|+++++++++.     
T Consensus       156 ~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~  235 (280)
T PF01073_consen  156 AVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEP  235 (280)
T ss_pred             HHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccc
Confidence            8765443   112  3334444444444211         00 00 0         0122389999999999862     


Q ss_pred             -----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceec
Q 013761          364 -----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVR  401 (437)
Q Consensus       364 -----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~  401 (437)
                           ..|+.|.|.-++.    ..++++|...+.+.+|++..+
T Consensus       236 ~~~~~~~G~~y~itd~~p----~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  236 GKPERVAGQAYFITDGEP----VPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             cccccCCCcEEEEECCCc----cCcHHHHHHHHHHHCCCCCCc
Confidence                 2588998853332    234899999999999965444

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.86  E-value=1.5e-20  Score=205.83  Aligned_cols=264  Identities=14%  Similarity=0.115  Sum_probs=180.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHH-HHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCT-LKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~-v~~a~~~~D~VIh~Ag~  236 (437)
                      .+|+||||||+||||++|+++|+++ |++|++++|..... .... ...++++.+|++|.+. ++++++++|+|||+||.
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~  392 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI-SRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI  392 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh-hhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence            5679999999999999999999986 79999999976431 1111 2368899999998665 67788999999999997


Q ss_pred             CCCc-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccC-cccchhhhhhh
Q 013761          237 RSTI-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQG-TYFQDVVAFKY  309 (437)
Q Consensus       237 ~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~-~~~~~y~~sk~  309 (437)
                      ....     +...+++|+.++.+++++|++++.++.++++. .|+...   ...+.++... ....|. .+.+.|+.+|.
T Consensus       393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~---~~~~~E~~~~-~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCT---DKYFDEDTSN-LIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             cCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCC---CCCcCccccc-cccCCCCCCccchHHHHH
Confidence            5432     35688999999999999999998667666653 233110   0122222111 011221 13457999999


Q ss_pred             hcccchhhhhcccccceeeeeeeccCcccee-----------------c-----cccCC--------CcccHHHHHHHHH
Q 013761          310 DAGMDAKFELSETGDAVFSGYVFTRGGYVEL-----------------S-----KKLSL--------PLGCTLDRYEGLV  359 (437)
Q Consensus       310 a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i-----------------~-----~~~~~--------p~g~v~D~~~gi~  359 (437)
                      .++.....+..+++..+...|+++.||....                 .     +.+.+        ...|++|++++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            9999988877778888888888887774210                 0     01101        1128999999999


Q ss_pred             HHhcc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCC-ccc-----------CCCCCCCCCHH
Q 013761          360 LSVGG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSS-FRP-----------VKPDDPPMDPF  420 (437)
Q Consensus       360 l~~~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~-~r~-----------~~~~~~~ld~~  420 (437)
                      +++..     +|+.|++  +++.  +.++++|+++.+.+..|...  +.+|... +++           .......+|.+
T Consensus       549 ~~l~~~~~~~~g~iyni--~~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  624 (660)
T PRK08125        549 RIIENKDNRCDGQIINI--GNPD--NEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR  624 (660)
T ss_pred             HHHhccccccCCeEEEc--CCCC--CceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCChH
Confidence            88853     2566655  4431  13689999999999988422  2232211 111           12234468999


Q ss_pred             HHhhccceeeccc
Q 013761          421 LVHTMTIRFEPRR  433 (437)
Q Consensus       421 ki~~~gi~fep~~  433 (437)
                      |+++. ++|+|+.
T Consensus       625 ka~~~-LGw~P~~  636 (660)
T PRK08125        625 NARRL-LDWEPKI  636 (660)
T ss_pred             HHHHH-hCCCCCC
Confidence            99988 8999964

>PLN02650 dihydroflavonol-4-reductase

Probab=99.86  E-value=2.5e-20  Score=188.51  Aligned_cols=263  Identities=16%  Similarity=0.109  Sum_probs=175.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHH-hh--C---CCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVV-DM--L---PRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~-~~--~---~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      ..|+||||||+||||++|+++|+++|++|++++|+.+. ... ..  .   ...+.++.+|++|.+.++++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            45799999999999999999999999999999997542 111 11  1   12578899999999999999999999999


Q ss_pred             eccCCCCc----hhhHHHHHHHHHHHHHHHHHhcC-C-ceeeeecC-CcchhhhhhhhhccCCCCccee--eccCcccch
Q 013761          233 CATARSTI----TGDLFRVDYQGVYNVTKAFQDFN-N-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWE--VRQGTYFQD  303 (437)
Q Consensus       233 ~Ag~~~~~----~~~~~~vNv~gt~~l~~aa~~~g-v-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i--~rP~~~~~~  303 (437)
                      +|+.....    ....+++|+.|+.++++++.+.+ + ++.++++. .++...... ....++......  ..+..+...
T Consensus        84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~-~~~~E~~~~~~~~~~~~~~~~~~  162 (351)
T PLN02650         84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQK-PVYDEDCWSDLDFCRRKKMTGWM  162 (351)
T ss_pred             eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCC-CccCcccCCchhhhhccccccch
Confidence            99865321    24689999999999999999877 4 46665543 222110000 011222111000  011112357


Q ss_pred             hhhhhhhcccchhhhhcccccceeeeeeeccCccce-------ec-------cc---c----CCCcccHHHHHHHHHHHh
Q 013761          304 VVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-------LS-------KK---L----SLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-------i~-------~~---~----~~p~g~v~D~~~gi~l~~  362 (437)
                      |+.+|..++.....+..+++..+...++++.||...       +.       ..   +    .....||+|+++++++++
T Consensus       163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l  242 (351)
T PLN02650        163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLF  242 (351)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHh
Confidence            999999999988887777888888888877777321       00       00   0    012349999999999988


Q ss_pred             cc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCC-cccCCCCCCCCCHHHHhhccceeeccc
Q 013761          363 GG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSS-FRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       363 ~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~-~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ..  .++.| + ++..    .+++.|+++.+.+..+.  ..+|... .++.......+|..+++.  ++|+|+.
T Consensus       243 ~~~~~~~~~-i-~~~~----~~s~~el~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~d~~k~~~--lG~~p~~  306 (351)
T PLN02650        243 EHPAAEGRY-I-CSSH----DATIHDLAKMLREKYPE--YNIPARFPGIDEDLKSVEFSSKKLTD--LGFTFKY  306 (351)
T ss_pred             cCcCcCceE-E-ecCC----CcCHHHHHHHHHHhCcc--cCCCCCCCCcCcccccccCChHHHHH--hCCCCCC
Confidence            53  34567 3 2222    36899999999987762  2233221 123334456789999875  5788863

>PLN02240 UDP-glucose 4-epimerase

Probab=99.86  E-value=6.1e-20  Score=185.11  Aligned_cols=258  Identities=14%  Similarity=0.116  Sum_probs=174.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhh----CCCCeEEEEecCCCHHHHHHHHh--cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDM----LPRSVEIVLGDVGDPCTLKAAVE--NC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~----~~~~v~~v~~Dltd~~~v~~a~~--~~  227 (437)
                      |++|+||||||+||||++|+++|+++|++|++++|....  .   ....    ....+.++.+|++|.+++.++++  ++
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            678899999999999999999999999999999875321  1   1111    12467899999999999999987  57


Q ss_pred             cEEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          228 NKIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       228 D~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      |+|||+||....     .+..++++|+.++.++++++.+.+++ +.++++. .|+...   ...+.++       .|..+
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~---~~~~~E~-------~~~~~  152 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPE---EVPCTEE-------FPLSA  152 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCC---CCCCCCC-------CCCCC
Confidence            999999986432     24568999999999999999988875 5555432 122110   0112222       23334


Q ss_pred             cchhhhhhhhcccchhhhhc-ccccceeeeeeeccCccce---------------------ec--c--ccC-------CC
Q 013761          301 FQDVVAFKYDAGMDAKFELS-ETGDAVFSGYVFTRGGYVE---------------------LS--K--KLS-------LP  347 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~-~~~~~v~~g~~~~~~G~~~---------------------i~--~--~~~-------~p  347 (437)
                      .+.|+.+|...+........ ..+..++..|+++.||...                     +.  +  .+.       .+
T Consensus       153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  232 (352)
T PLN02240        153 TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTK  232 (352)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCC
Confidence            56799999988877654433 3455666667766655210                     00  0  000       01


Q ss_pred             c-------ccHHHHHHHHHHHhc-------cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCC
Q 013761          348 L-------GCTLDRYEGLVLSVG-------GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPD  413 (437)
Q Consensus       348 ~-------g~v~D~~~gi~l~~~-------~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~  413 (437)
                      .       .|++|++++++.++.       ..++.|++  +++.   .++++|+++.+.+.+|.+ +.+.+...++.+..
T Consensus       233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni--~~~~---~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~  306 (352)
T PLN02240        233 DGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNL--GTGK---GTSVLEMVAAFEKASGKK-IPLKLAPRRPGDAE  306 (352)
T ss_pred             CCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEc--cCCC---cEeHHHHHHHHHHHhCCC-CCceeCCCCCCChh
Confidence            1       379999999887773       12466755  4443   579999999999998842 22322233444445


Q ss_pred             CCCCCHHHHhhccceeeccc
Q 013761          414 DPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       414 ~~~ld~~ki~~~gi~fep~~  433 (437)
                      ...+|.+|+++. ++|.|+.
T Consensus       307 ~~~~d~~k~~~~-lg~~p~~  325 (352)
T PLN02240        307 EVYASTEKAEKE-LGWKAKY  325 (352)
T ss_pred             hhhcCHHHHHHH-hCCCCCC
Confidence            567899999988 7888873

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=3.4e-20  Score=185.23  Aligned_cols=260  Identities=13%  Similarity=0.042  Sum_probs=174.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh--h---CCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD--M---LPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~--~---~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      .+|+||||||+||||++|+++|+++|++|++++|+...  ....  .   ...++.++.+|++|.++++++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            36899999999999999999999999999999887652  1111  1   124688999999999999999999999999


Q ss_pred             eccCCCC-----chhhHHHHHHHHHHHHHHHHHhc-CC-ceeeeecC-Ccchhhh--hhhhhccCCCCcceeeccC---c
Q 013761          233 CATARST-----ITGDLFRVDYQGVYNVTKAFQDF-NN-KLAQLRAG-KSSKSKL--LLAKFKSADSLNGWEVRQG---T  299 (437)
Q Consensus       233 ~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~-gv-kl~~l~~~-~~g~sk~--~~~k~v~~ssl~~~i~rP~---~  299 (437)
                      |||....     .+.+.+++|+.|+.++++++.+. ++ ++.++++. .++....  .....+.|...    ..|.   .
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~----~~p~~~~~  159 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFF----TNPSFAEE  159 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCC----CchhHhcc
Confidence            9996432     24568899999999999999875 34 35555542 2221110  00011222211    1121   1


Q ss_pred             ccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee---------------ccccC----CCcccHHHHHHHHHH
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------------SKKLS----LPLGCTLDRYEGLVL  360 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------------~~~~~----~p~g~v~D~~~gi~l  360 (437)
                      ....|+.+|..++.....+..+++..+...|+++.||....               ...+.    ....|++|++++++.
T Consensus       160 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~  239 (325)
T PLN02989        160 RKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVK  239 (325)
T ss_pred             cccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHH
Confidence            23569999999998887777777887788888887773210               00110    112389999999999


Q ss_pred             HhccC--CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCC--CcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          361 SVGGN--GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFS--SFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       361 ~~~~~--Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~--~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++..+  ++.|++  +.+    .++++|+++.+.+..+.  ..++..  ..++.+.....+|.+|++.  ++|.|+.
T Consensus       240 ~l~~~~~~~~~ni--~~~----~~s~~ei~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~k~~~--lg~~p~~  306 (325)
T PLN02989        240 ALETPSANGRYII--DGP----VVTIKDIENVLREFFPD--LCIADRNEDITELNSVTFNVCLDKVKS--LGIIEFT  306 (325)
T ss_pred             HhcCcccCceEEE--ecC----CCCHHHHHHHHHHHCCC--CCCCCCCCCcccccccCcCCCHHHHHH--cCCCCCC
Confidence            88532  456755  222    36899999999998872  222211  1112222355789999986  6788864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.86  E-value=3e-20  Score=186.60  Aligned_cols=248  Identities=15%  Similarity=0.137  Sum_probs=160.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH--HHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE--VVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~--~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      +++|+||||||+||||++|+++|+++|  ++|++++|+....  ....+ ...+.++.+|++|.+.+.++++++|+|||+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            568899999999999999999999986  7899999875421  11222 246889999999999999999999999999


Q ss_pred             ccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec-------CCcchhhhhhhhhc-------cCCCCcce
Q 013761          234 ATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA-------GKSSKSKLLLAKFK-------SADSLNGW  293 (437)
Q Consensus       234 Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~-------~~~g~sk~~~~k~v-------~~ssl~~~  293 (437)
                      ||....     .+.+.+++|+.|+.++++++.+.+++ +.++++       ..|+.+|...+.++       ...++..+
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~  161 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLASDKLFVAANNISGSKGTRFS  161 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHhhccccCcEEE
Confidence            997532     24568999999999999999998874 555543       12445555544432       12345556


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc--CCcEEEE
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG--NGRSYVL  371 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~--~Ge~y~l  371 (437)
                      ++||+..+.+.+ +-.    .........+...++  +   ++ ....+.+    .|++|++++++.++..  .|+.|  
T Consensus       162 ~lR~g~v~G~~~-~~i----~~~~~~~~~~~~~~~--i---~~-~~~~r~~----i~v~D~a~a~~~al~~~~~~~~~--  224 (324)
T TIGR03589       162 VVRYGNVVGSRG-SVV----PFFKSLKEEGVTELP--I---TD-PRMTRFW----ITLEQGVNFVLKSLERMLGGEIF--  224 (324)
T ss_pred             EEeecceeCCCC-CcH----HHHHHHHHhCCCCee--e---CC-CCceEee----EEHHHHHHHHHHHHhhCCCCCEE--
Confidence            666654433211 000    000000000100000  0   00 0111122    3799999999999853  45555  


Q ss_pred             EccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCC-CCCCCCHHHHhhccceeeccc
Q 013761          372 ILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKP-DDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       372 ~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~-~~~~ld~~ki~~~gi~fep~~  433 (437)
                      + +.+.   ..++.|+++.+.+...     +.+...++.+. ....+|.++++.. ++|+|+.
T Consensus       225 ~-~~~~---~~sv~el~~~i~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~-lg~~~~~  277 (324)
T TIGR03589       225 V-PKIP---SMKITDLAEAMAPECP-----HKIVGIRPGEKLHEVMITEDDARHT-YELGDYY  277 (324)
T ss_pred             c-cCCC---cEEHHHHHHHHHhhCC-----eeEeCCCCCchhHhhhcChhhhhhh-cCCCCeE
Confidence            2 3332   4689999999987543     22333455543 3356899999988 8999874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.85  E-value=1.1e-19  Score=184.21  Aligned_cols=265  Identities=14%  Similarity=0.103  Sum_probs=173.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++|+||||||+||||++++++|+++|++|++++|+.+.  .....+  ...+.++.+|++|.+.+.++++++|+|||+|+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~   88 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA   88 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence            57799999999999999999999999999999987542  111221  24688999999999999999999999999999


Q ss_pred             CCCCc-------hh-----hHHHHHHHHHHHHHHHHHhcC-C-ceeeeec-CCcchhhhhh--hhhccCCCCcce--eec
Q 013761          236 ARSTI-------TG-----DLFRVDYQGVYNVTKAFQDFN-N-KLAQLRA-GKSSKSKLLL--AKFKSADSLNGW--EVR  296 (437)
Q Consensus       236 ~~~~~-------~~-----~~~~vNv~gt~~l~~aa~~~g-v-kl~~l~~-~~~g~sk~~~--~k~v~~ssl~~~--i~r  296 (437)
                      .....       +.     .++++|+.|+.++++++.+++ + ++.++++ ..|+......  ...+.+......  ...
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~  168 (353)
T PLN02896         89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN  168 (353)
T ss_pred             cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence            75321       22     245666799999999998875 5 4566554 2333111000  011222210000  000


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee---c-----------ccc-C-------------CCc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---S-----------KKL-S-------------LPL  348 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---~-----------~~~-~-------------~p~  348 (437)
                      +..+..+|+.+|+.++.....+..+++..+...|+++.||....   .           ... .             ...
T Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~df  248 (353)
T PLN02896        169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIAL  248 (353)
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeE
Confidence            11133579999999999988888788888999999988884210   0           000 0             022


Q ss_pred             ccHHHHHHHHHHHhcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhcc
Q 013761          349 GCTLDRYEGLVLSVGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMT  426 (437)
Q Consensus       349 g~v~D~~~gi~l~~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~g  426 (437)
                      .|++|++++++.++..  .+..|++  . +.   ..++.|+++.+.+..+...+.+.+..-++.+. ...+|.++++.  
T Consensus       249 i~v~Dva~a~~~~l~~~~~~~~~~~--~-~~---~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--  319 (353)
T PLN02896        249 VHIEDICDAHIFLMEQTKAEGRYIC--C-VD---SYDMSELINHLSKEYPCSNIQVRLDEEKRGSI-PSEISSKKLRD--  319 (353)
T ss_pred             EeHHHHHHHHHHHHhCCCcCccEEe--c-CC---CCCHHHHHHHHHHhCCCCCccccccccccCcc-ccccCHHHHHH--
Confidence            3899999999998852  2445632  2 22   46899999999988762211111111111111 24578999975  


Q ss_pred             ceeeccc
Q 013761          427 IRFEPRR  433 (437)
Q Consensus       427 i~fep~~  433 (437)
                      ++|+|+.
T Consensus       320 lGw~p~~  326 (353)
T PLN02896        320 LGFEYKY  326 (353)
T ss_pred             cCCCccC
Confidence            6788874

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.85  E-value=5.3e-20  Score=182.69  Aligned_cols=238  Identities=13%  Similarity=0.041  Sum_probs=155.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~~  239 (437)
                      |+||||||+||||++|+++|+++| +|++++|...            .+.+|++|.+.+.+++++  +|+|||+|+....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            479999999999999999999999 7998888532            245899999999999985  7999999998653


Q ss_pred             c-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          240 I-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       240 ~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                      .     ++..+.+|+.|+.+++++|++.++++.++++. .|+..+.   ..+.+.       .|..+.+.|+.+|+.++.
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~---~p~~E~-------~~~~P~~~Yg~sK~~~E~  137 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGD---IPWQET-------DATAPLNVYGETKLAGEK  137 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCC---CCcCCC-------CCCCCCCHHHHHHHHHHH
Confidence            3     34567899999999999999999888777753 2322110   011121       233456789999999888


Q ss_pred             chhhhhcccccceeeeeeeccCccc-----e-ec------cccCCC-c--c-------cHHHHHHHHHHHhcc--CCcEE
Q 013761          314 DAKFELSETGDAVFSGYVFTRGGYV-----E-LS------KKLSLP-L--G-------CTLDRYEGLVLSVGG--NGRSY  369 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G~~-----~-i~------~~~~~p-~--g-------~v~D~~~gi~l~~~~--~Ge~y  369 (437)
                      ....+..+    .+..|+++.||..     . +.      ..+... +  +       +++|+++++.+++..  .++.|
T Consensus       138 ~~~~~~~~----~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giy  213 (299)
T PRK09987        138 ALQEHCAK----HLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLY  213 (299)
T ss_pred             HHHHhCCC----EEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeE
Confidence            76544332    2445555555421     1 00      011100 0  1       234455666665532  23567


Q ss_pred             EEEccCCCCCCCCcHHHHHHHHHhhhC---Cce----e-cccCC--CcccCCCCCCCCCHHHHhhccceeecc
Q 013761          370 VLILEAGPSADRSQSKLYFARFSTKVG---FCR----V-RVPFS--SFRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       370 ~l~l~~~~~~~~~s~~e~~~~i~~~~G---~~~----v-~iP~~--~~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      ++  +++.   .+|+.|+++.+.+..+   ...    + .+|..  ..++..+....+|.+|+++. ++|+|.
T Consensus       214 ni--~~~~---~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~-lg~~~~  280 (299)
T PRK09987        214 HL--VASG---TTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQN-FALVLP  280 (299)
T ss_pred             Ee--eCCC---CccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHH-hCCCCc
Confidence            65  4432   4689999999977543   211    1 12221  12333566779999999987 777763

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.85  E-value=1.3e-19  Score=185.29  Aligned_cols=260  Identities=11%  Similarity=-0.011  Sum_probs=177.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST  239 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~  239 (437)
                      .+|+||||||+||||++|++.|+++|++|++++|..... .......+.++.+|++|.+.+.++++++|+|||+|+....
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~   98 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG   98 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-cccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence            468999999999999999999999999999999864321 1111113578889999999999999999999999986431


Q ss_pred             ------chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-Ccchhhhhhhh-hccCCCCcceeeccCcccchhhhhhhh
Q 013761          240 ------ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAK-FKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       240 ------~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k-~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                            .....+..|+.++.++++++++.+++ +.++++. .|+..+...+. .+.++.     ..|..+.+.|+.+|..
T Consensus        99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~-----~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESD-----AWPAEPQDAYGLEKLA  173 (370)
T ss_pred             ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCccc-----CCCCCCCCHHHHHHHH
Confidence                  23456789999999999999999985 6666543 34321110000 011110     0133456789999999


Q ss_pred             cccchhhhhcccccceeeeeeeccCccce------------ec-------cccC-CC-------cccHHHHHHHHHHHhc
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVE------------LS-------KKLS-LP-------LGCTLDRYEGLVLSVG  363 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i~-------~~~~-~p-------~g~v~D~~~gi~l~~~  363 (437)
                      ++.....+..+++..+...|+++.||...            +.       ..+. +.       ..|++|++++++..+.
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence            99988777777788888888887777421            00       0110 11       1289999999998774


Q ss_pred             c-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          364 G-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       364 ~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      . .++.|++  +++.   .++++|+++.+.+..|.. +.+.... .+.......+|.+++++. ++|+|+.
T Consensus       254 ~~~~~~~nv--~~~~---~~s~~el~~~i~~~~g~~-~~i~~~~-~~~~~~~~~~d~sk~~~~-lgw~p~~  316 (370)
T PLN02695        254 SDFREPVNI--GSDE---MVSMNEMAEIALSFENKK-LPIKHIP-GPEGVRGRNSDNTLIKEK-LGWAPTM  316 (370)
T ss_pred             ccCCCceEe--cCCC---ceeHHHHHHHHHHHhCCC-CCceecC-CCCCccccccCHHHHHHh-cCCCCCC
Confidence            3 3455644  5543   578999999999888842 1111111 122223456899999988 8999864

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.84  E-value=8.6e-20  Score=178.41  Aligned_cols=259  Identities=19%  Similarity=0.150  Sum_probs=188.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HH---HH-hhC--CCCeEEEEecCCCHHHHHHHHhcc--cEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QE---VV-DML--PRSVEIVLGDVGDPCTLKAAVENC--NKI  230 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~---~~-~~~--~~~v~~v~~Dltd~~~v~~a~~~~--D~V  230 (437)
                      .++||||||+|+||+|.+-+|+++|+.|+++|.-..  .+   .. ...  ...+.++++|+.|.+.++++|+.+  |.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            478999999999999999999999999999997443  11   11 222  368999999999999999999864  999


Q ss_pred             EEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeee-cCCcchhhhhhhhhccCCCCcceeeccCc-ccc
Q 013761          231 IYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLR-AGKSSKSKLLLAKFKSADSLNGWEVRQGT-YFQ  302 (437)
Q Consensus       231 Ih~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~-~~~~g~sk~~~~k~v~~ssl~~~i~rP~~-~~~  302 (437)
                      +|.|+.....     +..+...|+.|+.++++++++++++ +...+ +..||....          ++.+.-.|.. +.+
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~----------ip~te~~~t~~p~~  151 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTK----------VPITEEDPTDQPTN  151 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcce----------eeccCcCCCCCCCC
Confidence            9999975432     5668999999999999999999976 33332 234543322          2222223333 678


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------------------------------eccccCCCcc-
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------------------------------LSKKLSLPLG-  349 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------------------------------i~~~~~~p~g-  349 (437)
                      +|+.+|+..+.........+...+...|.|+++|-..                                ..+++...+| 
T Consensus       152 pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt  231 (343)
T KOG1371|consen  152 PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGT  231 (343)
T ss_pred             cchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCC
Confidence            8899999888877666666666677777888766100                                0011211121 


Q ss_pred             ------cHHHHHHHHHHHhc---cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHH
Q 013761          350 ------CTLDRYEGLVLSVG---GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPF  420 (437)
Q Consensus       350 ------~v~D~~~gi~l~~~---~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~  420 (437)
                            ++.|.+++.+.++.   ..++.-++|++++.   ..+..++...+.++.|. .+++++-..|+.+....--+++
T Consensus       232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~---g~~V~~lv~a~~k~~g~-~~k~~~v~~R~gdv~~~ya~~~  307 (343)
T KOG1371|consen  232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGK---GSSVLELVTAFEKALGV-KIKKKVVPRRNGDVAFVYANPS  307 (343)
T ss_pred             eeecceeeEehHHHHHHHhhccccchheeeEeecCCC---CccHHHHHHHHHHHhcC-CCCccccCCCCCCceeeeeChH
Confidence                  68889999999883   23444466778775   45689999999999995 4566666678888888888999


Q ss_pred             HHhhccceeecccC
Q 013761          421 LVHTMTIRFEPRRQ  434 (437)
Q Consensus       421 ki~~~gi~fep~~~  434 (437)
                      ++.+. ++|+|...
T Consensus       308 ~a~~e-lgwk~~~~  320 (343)
T KOG1371|consen  308 KAQRE-LGWKAKYG  320 (343)
T ss_pred             HHHHH-hCCccccC
Confidence            99888 89998753

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.84  E-value=8.1e-20  Score=184.48  Aligned_cols=265  Identities=13%  Similarity=0.121  Sum_probs=171.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~  233 (437)
                      |+||||||+||||++|+++|+++|++ |+++++...   ......+  ...+.++.+|++|.+++.++++.  +|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            47999999999999999999999976 555665321   1112222  23578899999999999999975  7999999


Q ss_pred             ccCCCC-----chhhHHHHHHHHHHHHHHHHHhc---------CC-ceeeeecC-CcchhhhhhhhhccCCCCc-ceeec
Q 013761          234 ATARST-----ITGDLFRVDYQGVYNVTKAFQDF---------NN-KLAQLRAG-KSSKSKLLLAKFKSADSLN-GWEVR  296 (437)
Q Consensus       234 Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~---------gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~-~~i~r  296 (437)
                      ||....     .++.++++|+.|+.+++++|.+.         ++ ++.++++. .|+..... .......+.+ ...-.
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHP-DEVENSEELPLFTETT  159 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcc-ccccccccCCCccccC
Confidence            997532     24678999999999999999874         22 45555542 23311000 0000000000 11112


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee--------------ccccCC--------CcccHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL--------------SKKLSL--------PLGCTLDR  354 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i--------------~~~~~~--------p~g~v~D~  354 (437)
                      |..+.+.|+.+|..++.....+..+++...+..++...||....              ...+.+        ...|++|+
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence            33355789999999998887777777777676776666552210              011111        12399999


Q ss_pred             HHHHHHHhcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCc-eecccCC------CcccCCCCCCCCCHHHHhhc
Q 013761          355 YEGLVLSVGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFC-RVRVPFS------SFRPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       355 ~~gi~l~~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~-~v~iP~~------~~r~~~~~~~~ld~~ki~~~  425 (437)
                      ++++++++..  .++.|++  +++.   ..+++++++.+.+.+|.. +..+|+.      ..++.......+|.+|+++.
T Consensus       240 a~a~~~~l~~~~~~~~yni--~~~~---~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  314 (352)
T PRK10084        240 ARALYKVVTEGKAGETYNI--GGHN---EKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRE  314 (352)
T ss_pred             HHHHHHHHhcCCCCceEEe--CCCC---cCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHHH
Confidence            9999988743  3667766  4432   457899999999988831 1112221      12333344457899999987


Q ss_pred             cceeeccc
Q 013761          426 TIRFEPRR  433 (437)
Q Consensus       426 gi~fep~~  433 (437)
                       ++|+|+.
T Consensus       315 -lg~~p~~  321 (352)
T PRK10084        315 -LGWKPQE  321 (352)
T ss_pred             -cCCCCcC
Confidence             6888864

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.84  E-value=8e-20  Score=182.69  Aligned_cols=219  Identities=21%  Similarity=0.261  Sum_probs=152.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT  241 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~  241 (437)
                      |+|+||||||+||++|+++|+++|++|++++|+.+... .....+++++.+|++|++++.++++++|+|||+++......
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~   79 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDL   79 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCc
Confidence            48999999999999999999999999999999864311 11123689999999999999999999999999987554445


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCc-eeeeec---CC-----cchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          242 GDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA---GK-----SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       242 ~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~---~~-----~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                      ..+.++|+.++.++++++++++++ +.++++   ..     +..+|...+.++..++++++++||+.++.... ..+   
T Consensus        80 ~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~-~~~---  155 (317)
T CHL00194         80 YNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLI-SQY---  155 (317)
T ss_pred             cchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhhh-hhh---
Confidence            568889999999999999999986 555443   12     23456667778888899999999985542210 000   


Q ss_pred             cchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc---cCCcEEEEEccCCCCCCCCcHHHHHH
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG---GNGRSYVLILEAGPSADRSQSKLYFA  389 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l~~~~~~~~~s~~e~~~  389 (437)
                         ...... +.   +.++.+  +      .-.....+++|+++++..++.   ..|+.|++.  .+   +.+|++|+++
T Consensus       156 ---~~~~~~-~~---~~~~~~--~------~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~--g~---~~~s~~el~~  215 (317)
T CHL00194        156 ---AIPILE-KQ---PIWITN--E------STPISYIDTQDAAKFCLKSLSLPETKNKTFPLV--GP---KSWNSSEIIS  215 (317)
T ss_pred             ---hhhhcc-CC---ceEecC--C------CCccCccCHHHHHHHHHHHhcCccccCcEEEec--CC---CccCHHHHHH
Confidence               000000 00   011111  1      001122368999999998884   246777663  32   2468999999


Q ss_pred             HHHhhhCCc--eecccCC
Q 013761          390 RFSTKVGFC--RVRVPFS  405 (437)
Q Consensus       390 ~i~~~~G~~--~v~iP~~  405 (437)
                      .+.+..|..  ...+|.+
T Consensus       216 ~~~~~~g~~~~~~~vp~~  233 (317)
T CHL00194        216 LCEQLSGQKAKISRVPLF  233 (317)
T ss_pred             HHHHHhCCCCeEEeCCHH
Confidence            999999842  2335543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.84  E-value=2.4e-19  Score=176.80  Aligned_cols=256  Identities=14%  Similarity=0.113  Sum_probs=170.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccEEEEe
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNKIIYC  233 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~  233 (437)
                      +||||||||+||++++++|++.|  ++|++++|...   .+....+  ...+.++.+|++|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            48999999999999999999987  78998887432   1111112  23678899999999999999998  8999999


Q ss_pred             ccCCCC-----chhhHHHHHHHHHHHHHHHHHhcC--CceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhh
Q 013761          234 ATARST-----ITGDLFRVDYQGVYNVTKAFQDFN--NKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       234 Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~g--vkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      |+....     .+..++++|+.|+.++++++.+.+  +++.++++. .|+.....  ..+.+.       .|..+...|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~--~~~~e~-------~~~~~~~~Y~  151 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKG--DAFTET-------TPLAPSSPYS  151 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCC--CCcCCC-------CCCCCCCchH
Confidence            997542     245689999999999999998864  356555542 22211000  011111       1222346788


Q ss_pred             hhhhhcccchhhhhcccccceeeeeeeccCccce--------e----c--cccC-C-------CcccHHHHHHHHHHHhc
Q 013761          306 AFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L----S--KKLS-L-------PLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i----~--~~~~-~-------p~g~v~D~~~gi~l~~~  363 (437)
                      .+|...+........+.+..+...+....||...        +    .  ..+. +       ...|++|+++++...+.
T Consensus       152 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~  231 (317)
T TIGR01181       152 ASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE  231 (317)
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc
Confidence            8888888777666556666666666665555211        0    0  0110 0       11279999999998884


Q ss_pred             --cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          364 --GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       364 --~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                        ..|+.|++  .++.   .++++|+++.+.+..|.+...+++...++.......+|.+|+++. ++|.|+.
T Consensus       232 ~~~~~~~~~~--~~~~---~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-lG~~p~~  297 (317)
T TIGR01181       232 KGRVGETYNI--GGGN---ERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRE-LGWAPKY  297 (317)
T ss_pred             CCCCCceEEe--CCCC---ceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHH-hCCCCCC
Confidence              34566766  4332   468999999999999854333443333444444457899999877 7788764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.83  E-value=2e-19  Score=177.39  Aligned_cols=256  Identities=16%  Similarity=0.119  Sum_probs=177.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc-cEEEEeccCCCCch
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC-NKIIYCATARSTIT  241 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~-D~VIh~Ag~~~~~~  241 (437)
                      .||||||+||||++|+++|+++|++|++++|.........  ..+.++.+|++|.+.+.++++.+ |+|||+|+......
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~   79 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD   79 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence            4999999999999999999999999999999765311111  46789999999999999999998 99999999865432


Q ss_pred             ------hhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          242 ------GDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       242 ------~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                            ..++.+|+.|+.++++++++.+++ +.+.++.. ++..  .....+.++.      .|..+.+.|+.+|+.++.
T Consensus        80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~--~~~~~~~E~~------~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD--PPPLPIDEDL------GPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC--CCCCCccccc------CCCCCCCHHHHHHHHHHH
Confidence                  248999999999999999998886 44433211 2211  0001222321      222334489999999999


Q ss_pred             chhhhhcccccceeeeeeeccCccce-------e--------cccc---CC--------CcccHHHHHHHHHHHhccCCc
Q 013761          314 DAKFELSETGDAVFSGYVFTRGGYVE-------L--------SKKL---SL--------PLGCTLDRYEGLVLSVGGNGR  367 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G~~~-------i--------~~~~---~~--------p~g~v~D~~~gi~l~~~~~Ge  367 (437)
                      ....+..+++..+...|+.+.||...       .        ....   ..        ...|++|+++++++++.....
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  231 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence            88777767777777777777666221       0        0001   01        123799999999999964333


Q ss_pred             -EEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCC--cccCCCCCCCCCHHHHhhccceeeccc
Q 013761          368 -SYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSS--FRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       368 -~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~--~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                       .|++  +.+.  ...+++|+++.+.+..|.....+.+..  .+........+|..+.+.. ++|+|+.
T Consensus       232 ~~~ni--~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~p~~  295 (314)
T COG0451         232 GVFNI--GSGT--AEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAA-LGWEPKV  295 (314)
T ss_pred             cEEEe--CCCC--CcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHH-hCCCCCC
Confidence             5555  4431  136899999999999885322122222  2334456679999999987 8998873

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.83  E-value=1.1e-18  Score=174.95  Aligned_cols=255  Identities=18%  Similarity=0.118  Sum_probs=166.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHH---HhhC-CCCeEEEEecCCCHHHHHHHHh--cccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEV---VDML-PRSVEIVLGDVGDPCTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~---~~~~-~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~  233 (437)
                      |+||||||+||||++|+++|+++|++|++++|...  ...   .... ...+.++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            47999999999999999999999999999987533  111   1111 2357788999999999999987  47999999


Q ss_pred             ccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeecc-Ccccchhh
Q 013761          234 ATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQ-GTYFQDVV  305 (437)
Q Consensus       234 Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP-~~~~~~y~  305 (437)
                      ||....     ...+.+++|+.++.++++++++.+++ +.++++. .|+...   ...+.++       .| +.+...|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~---~~~~~E~-------~~~~~p~~~Y~  150 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQP---KIPYVES-------FPTGTPQSPYG  150 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCC---CCccccc-------cCCCCCCChhH
Confidence            987542     13568999999999999999999876 5444432 122100   0011121       11 12356788


Q ss_pred             hhhhhcccchhhhhccc-ccceeeeeeeccCccc-----------------e----ec--cc--c-------C-------
Q 013761          306 AFKYDAGMDAKFELSET-GDAVFSGYVFTRGGYV-----------------E----LS--KK--L-------S-------  345 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~-~~~v~~g~~~~~~G~~-----------------~----i~--~~--~-------~-------  345 (437)
                      .+|...+........++ +..+...|++++||..                 .    ..  ..  +       .       
T Consensus       151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (338)
T PRK10675        151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE
Confidence            88888777665443332 3444555555544420                 0    00  00  0       0       


Q ss_pred             CCcccHHHHHHHHHHHhcc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHH
Q 013761          346 LPLGCTLDRYEGLVLSVGG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPF  420 (437)
Q Consensus       346 ~p~g~v~D~~~gi~l~~~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~  420 (437)
                      ....|++|+++++++++..     .++.|++  +++.   .++++|+++.+.+..|.. +++.+...++.+.....+|.+
T Consensus       231 ~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  304 (338)
T PRK10675        231 RDYIHVMDLADGHVAAMEKLANKPGVHIYNL--GAGV---GSSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADAS  304 (338)
T ss_pred             EeeEEHHHHHHHHHHHHHhhhccCCCceEEe--cCCC---ceeHHHHHHHHHHHhCCC-CCeeeCCCCCCchhhhhcCHH
Confidence            0123899999999988742     2456655  4443   578999999999999842 222222223333445578999


Q ss_pred             HHhhccceeeccc
Q 013761          421 LVHTMTIRFEPRR  433 (437)
Q Consensus       421 ki~~~gi~fep~~  433 (437)
                      |+++. ++|+|+.
T Consensus       305 k~~~~-lg~~p~~  316 (338)
T PRK10675        305 KADRE-LNWRVTR  316 (338)
T ss_pred             HHHHH-hCCCCcC
Confidence            99988 8898864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.83  E-value=3.3e-19  Score=177.13  Aligned_cols=257  Identities=21%  Similarity=0.234  Sum_probs=171.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC---
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS---  238 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~---  238 (437)
                      |+|+||||+|+||+++++.|+++|++|++++|+.+.. .......+.++.+|++|.+++.++++++|+|||+|+...   
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc-cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            4799999999999999999999999999999976531 111123688999999999999999999999999998642   


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchh
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~  316 (437)
                      ..+...+++|+.++.++++++.+.+++ +.++++. .++....  ...+.+..    ...|......|+.+|...+....
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~~----~~~~~~~~~~Y~~sK~~~e~~~~  153 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD--GTPADETT----PSSLDDMIGHYKRSKFLAEQAAL  153 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCC--CCCcCccC----CCCcccccChHHHHHHHHHHHHH
Confidence            235678999999999999999998875 5555432 1221000  01111211    11232234567888887777666


Q ss_pred             hhhcccccceeeeeeeccCccceec-------------ccc-C-----CCcccHHHHHHHHHHHhc--cCCcEEEEEccC
Q 013761          317 FELSETGDAVFSGYVFTRGGYVELS-------------KKL-S-----LPLGCTLDRYEGLVLSVG--GNGRSYVLILEA  375 (437)
Q Consensus       317 ~~~~~~~~~v~~g~~~~~~G~~~i~-------------~~~-~-----~p~g~v~D~~~gi~l~~~--~~Ge~y~l~l~~  375 (437)
                      ....+++......+..+.||.....             ..+ .     ....|++|++++++.++.  ..|+.|++  +.
T Consensus       154 ~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~--~~  231 (328)
T TIGR03466       154 EMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYIL--GG  231 (328)
T ss_pred             HHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEe--cC
Confidence            5555556666666666666532100             000 0     112389999999998884  34666755  32


Q ss_pred             CCCCCCCcHHHHHHHHHhhhCCce--ecccCCCccc-------------CC-----------CCCCCCCHHHHhhcccee
Q 013761          376 GPSADRSQSKLYFARFSTKVGFCR--VRVPFSSFRP-------------VK-----------PDDPPMDPFLVHTMTIRF  429 (437)
Q Consensus       376 ~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~r~-------------~~-----------~~~~~ld~~ki~~~gi~f  429 (437)
                      .    .++++|+++.+.+.+|.+.  +.+|....++             ..           .....+|.+|+++. ++|
T Consensus       232 ~----~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lg~  306 (328)
T TIGR03466       232 E----NLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRE-LGY  306 (328)
T ss_pred             C----CcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHH-cCC
Confidence            2    4789999999999998432  2344322111             01           12456899999988 899


Q ss_pred             ecc
Q 013761          430 EPR  432 (437)
Q Consensus       430 ep~  432 (437)
                      +|+
T Consensus       307 ~p~  309 (328)
T TIGR03466       307 RQR  309 (328)
T ss_pred             CCc
Confidence            995

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.82  E-value=5.6e-19  Score=193.68  Aligned_cols=260  Identities=14%  Similarity=0.097  Sum_probs=177.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCc-H--HHHhh--CCCCeEEEEecCCCHHHHHHHH--hcccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKAD-Q--EVVDM--LPRSVEIVLGDVGDPCTLKAAV--ENCNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~-~--~~~~~--~~~~v~~v~~Dltd~~~v~~a~--~~~D~V  230 (437)
                      .+|+|||||||||||++|+++|+++  |++|++++|... .  .....  ...++.++.+|++|.+.+..++  .++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            4689999999999999999999998  689999998532 1  11111  1346899999999999888776  568999


Q ss_pred             EEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcC-C-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          231 IYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFN-N-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       231 Ih~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~g-v-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ||+|+.....     ..+++++|+.|+.++++++++.+ + ++.++++. .|+.....  ....     .....|..+.+
T Consensus        85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~--~~~~-----~~E~~~~~p~~  157 (668)
T PLN02260         85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED--ADVG-----NHEASQLLPTN  157 (668)
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccc--cccC-----ccccCCCCCCC
Confidence            9999976432     34678999999999999999987 5 46666542 23211100  0000     00011222346


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccceec--------------cccCC--------CcccHHHHHHHHHH
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELS--------------KKLSL--------PLGCTLDRYEGLVL  360 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~--------------~~~~~--------p~g~v~D~~~gi~l  360 (437)
                      .|+.+|..++.....+..+++......|+++.||.....              ..+..        ...|++|+++++++
T Consensus       158 ~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~  237 (668)
T PLN02260        158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEV  237 (668)
T ss_pred             CcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHH
Confidence            799999999988877766677777888888777732100              11111        11389999999998


Q ss_pred             Hhc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          361 SVG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR-VRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       361 ~~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++.  ..|+.|++  +++.   ..++.|+++.+.+.+|... ..+.+...+|.......+|.+|++.  ++|+|+.
T Consensus       238 ~l~~~~~~~vyni--~~~~---~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~--lGw~p~~  306 (668)
T PLN02260        238 VLHKGEVGHVYNI--GTKK---ERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKK--LGWQERT  306 (668)
T ss_pred             HHhcCCCCCEEEE--CCCC---eeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHH--cCCCCCC
Confidence            874  24667766  4432   4689999999999998532 1233334455555566799999986  5788863

>PLN02583 cinnamoyl-CoA reductase

Probab=99.82  E-value=2.1e-18  Score=171.06  Aligned_cols=262  Identities=13%  Similarity=0.052  Sum_probs=165.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H---HHhhC---CCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E---VVDML---PRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~---~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      .+++||||||+||||++|+++|+++|++|++++|+... .   ....+   ..++.++.+|++|.+++.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            35799999999999999999999999999999996432 1   12222   23688999999999999999999999999


Q ss_pred             eccCCCCc---hhhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecCC-c--chhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          233 CATARSTI---TGDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAGK-S--SKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       233 ~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~~-~--g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      .++.....   +++++++|+.|+.++++++.+. +++ +.++++.. +  +.........+.+..... ...+......|
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~~~Y  163 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSD-QNFCRKFKLWH  163 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCC-HHHHhhcccHH
Confidence            88654322   4678999999999999999886 454 55554321 1  100000000112211100 00000011258


Q ss_pred             hhhhhhcccchhhhhcccccceeeeeeeccCcccee------ccc-cCC-----CcccHHHHHHHHHHHhc--cCCcEEE
Q 013761          305 VAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL------SKK-LSL-----PLGCTLDRYEGLVLSVG--GNGRSYV  370 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i------~~~-~~~-----p~g~v~D~~~gi~l~~~--~~Ge~y~  370 (437)
                      +.+|..++..+..+..+.+..+...++...+|....      ... ..+     ...+|+|+++++++++.  ..+++|+
T Consensus       164 ~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~r~~  243 (297)
T PLN02583        164 ALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYGRYL  243 (297)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCCcEE
Confidence            899999998886665556776666666666663211      010 011     12389999999999995  2345787


Q ss_pred             EEccCCCCCCCCcHHHHHHHHHhhhCCceecccCC-CcccCCCCCCCCCHHHHhhcccee
Q 013761          371 LILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFS-SFRPVKPDDPPMDPFLVHTMTIRF  429 (437)
Q Consensus       371 l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~-~~r~~~~~~~~ld~~ki~~~gi~f  429 (437)
                      +..+.     .....++++.+.+...  .+.+|-. ..-........++..|++.+|+.|
T Consensus       244 ~~~~~-----~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        244 CFNHI-----VNTEEDAVKLAQMLSP--LIPSPPPYEMQGSEVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             EecCC-----CccHHHHHHHHHHhCC--CCCCCCcccccCCCccccccChHHHHHhCccc
Confidence            74221     1223567777776533  3333321 000112345689999999999887

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.80  E-value=2.4e-18  Score=170.69  Aligned_cols=247  Identities=12%  Similarity=0.025  Sum_probs=155.9

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHH----HHHHh-----cccEEEEec
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL----KAAVE-----NCNKIIYCA  234 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v----~~a~~-----~~D~VIh~A  234 (437)
                      ||||||+||||++|+++|+++|++|+++.|+......     ...+..+|++|..+.    +++++     ++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-----HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            8999999999999999999999977766655432100     011234566654332    33332     579999999


Q ss_pred             cCCCC---chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhh
Q 013761          235 TARST---ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       235 g~~~~---~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                      |....   .....+++|+.++.+++++|++.++++.++++. .|+....   ..+.+.       .|..+.+.|+.+|+.
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~---~~~~E~-------~~~~p~~~Y~~sK~~  146 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTD---DFIEER-------EYEKPLNVYGYSKFL  146 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCC---CCCccC-------CCCCCCCHHHHHHHH
Confidence            85432   234578999999999999999999887766643 2221100   111121       122345779999999


Q ss_pred             cccchhhhhcccccceeeeeeeccCccce----------------ecc--ccCC---------CcccHHHHHHHHHHHhc
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVE----------------LSK--KLSL---------PLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~----------------i~~--~~~~---------p~g~v~D~~~gi~l~~~  363 (437)
                      ++.....+..+.+..+...|+++.||...                +..  .+.+         ...|++|++++++.++.
T Consensus       147 ~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~  226 (308)
T PRK11150        147 FDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWE  226 (308)
T ss_pred             HHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHh
Confidence            88877666555667777777777666221                000  0000         11389999999998885


Q ss_pred             c-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceec-ccCCCcc-cCCCCCCCCCHHHHhhccceeecc
Q 013761          364 G-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVR-VPFSSFR-PVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       364 ~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~-iP~~~~r-~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      . .++.|++  +++.   .++++|+++.+.+..|...+. +|..... ........+|..|++.+  +|.|+
T Consensus       227 ~~~~~~yni--~~~~---~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~--g~~p~  291 (308)
T PRK11150        227 NGVSGIFNC--GTGR---AESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAA--GYDKP  291 (308)
T ss_pred             cCCCCeEEc--CCCC---ceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhc--CCCCC
Confidence            3 3455644  5543   478999999999998732111 2221110 01122347899999974  78775

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.78  E-value=7.9e-18  Score=173.46  Aligned_cols=228  Identities=23%  Similarity=0.256  Sum_probs=154.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-------HHhhCCCCeEEEEecCCCHHHHHHHHh----c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-------VVDMLPRSVEIVLGDVGDPCTLKAAVE----N  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-------~~~~~~~~v~~v~~Dltd~~~v~~a~~----~  226 (437)
                      +..+++||||||||+||++++++|+++|++|++++|+....       ........++++.+|++|++++.++++    +
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            35678999999999999999999999999999999976421       011123468899999999999999998    5


Q ss_pred             ccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-------CcchhhhhhhhhccC--CCCcceeec
Q 013761          227 CNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-------KSSKSKLLLAKFKSA--DSLNGWEVR  296 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-------~~g~sk~~~~k~v~~--ssl~~~i~r  296 (437)
                      +|+||||+|.........+++|+.++.++++++++.+++ +.++++.       .+..+|...+..+..  .+++++++|
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~~~~~sK~~~E~~l~~~~~gl~~tIlR  216 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLEFQRAKLKFEAELQALDSDFTYSIVR  216 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcchHHHHHHHHHHHHHHhccCCCCEEEEc
Confidence            899999998644334556889999999999999999986 5555532       233456566665543  789999999


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc---cCCcEEEEEc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG---GNGRSYVLIL  373 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l  373 (437)
                      |+.++.....         .+.....+.      .+...|.....+.   ...+++|++++++.++.   ..|+.|++  
T Consensus       217 p~~~~~~~~~---------~~~~~~~g~------~~~~~GdG~~~~~---~~I~v~DlA~~i~~~~~~~~~~~~~~~I--  276 (390)
T PLN02657        217 PTAFFKSLGG---------QVEIVKDGG------PYVMFGDGKLCAC---KPISEADLASFIADCVLDESKINKVLPI--  276 (390)
T ss_pred             cHHHhcccHH---------HHHhhccCC------ceEEecCCccccc---CceeHHHHHHHHHHHHhCccccCCEEEc--
Confidence            9876542211         011111111      1111111111110   11268999999988873   34677766  


Q ss_pred             cCCCCCCCCcHHHHHHHHHhhhCCc--eecccCCCc
Q 013761          374 EAGPSADRSQSKLYFARFSTKVGFC--RVRVPFSSF  407 (437)
Q Consensus       374 ~~~~~~~~~s~~e~~~~i~~~~G~~--~v~iP~~~~  407 (437)
                      +..  .+.+|++|+++.+.+.+|.+  ...+|.+.+
T Consensus       277 ggp--~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~  310 (390)
T PLN02657        277 GGP--GKALTPLEQGEMLFRILGKEPKFFKVPIQIM  310 (390)
T ss_pred             CCC--CcccCHHHHHHHHHHHhCCCCceEEcCHHHH
Confidence            321  11468999999999999842  233555444

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.78  E-value=1e-17  Score=165.73  Aligned_cols=252  Identities=10%  Similarity=0.004  Sum_probs=162.8

Q ss_pred             EEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh----cccEEEEeccCCC
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYCATARS  238 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~Ag~~~  238 (437)
                      ||||||+|+||+++++.|+++|+ +|++++|.........+.  ...+..|+.+.+.++.+.+    ++|+|||+|+...
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLA--DLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhh--heeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            69999999999999999999997 788888765422111111  2356789999888887765    6899999999743


Q ss_pred             C---chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          239 T---ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       239 ~---~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                      .   .+...+++|+.|+.++++++.+.++++.++++. .|+...    ..+.++.      .+..+.+.|+.+|...+..
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~----~~~~e~~------~~~~p~~~Y~~sK~~~e~~  148 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE----AGFREGR------ELERPLNVYGYSKFLFDQY  148 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC----CCccccc------CcCCCCCHHHHHHHHHHHH
Confidence            2   245688999999999999999988887776643 222110    0111111      1112456788888888877


Q ss_pred             hhhhhc--ccccceeeeeeeccCccce--------ec----------cccC--------------CCcccHHHHHHHHHH
Q 013761          315 AKFELS--ETGDAVFSGYVFTRGGYVE--------LS----------KKLS--------------LPLGCTLDRYEGLVL  360 (437)
Q Consensus       315 ~~~~~~--~~~~~v~~g~~~~~~G~~~--------i~----------~~~~--------------~p~g~v~D~~~gi~l  360 (437)
                      ...+..  .....+...|+.+.||...        +.          ..+.              ....|++|++++++.
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~  228 (314)
T TIGR02197       149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW  228 (314)
T ss_pred             HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence            654322  2233455556666555321        00          0010              112389999999999


Q ss_pred             Hhcc-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ec-ccCCCcc-cCCCCCCCCCHHHHhhccceeeccc
Q 013761          361 SVGG-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR-VR-VPFSSFR-PVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       361 ~~~~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~-iP~~~~r-~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++.. .++.|++  +++.   .++++|+++.+.+..|.+. +. +|..... ........+|.+|+++. ++|+|+.
T Consensus       229 ~~~~~~~~~yni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-l~~~p~~  299 (314)
T TIGR02197       229 LLENGVSGIFNL--GTGR---ARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAA-GYYGPFT  299 (314)
T ss_pred             HHhcccCceEEc--CCCC---CccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHh-cCCCCcc
Confidence            8853 4455654  5443   5789999999999988532 11 2222111 01112346899999988 7898864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.78  E-value=6.6e-18  Score=162.06  Aligned_cols=262  Identities=18%  Similarity=0.182  Sum_probs=195.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHh-----hC----CCCeEEEEecCCCHHHHHHHHhcc--c
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVD-----ML----PRSVEIVLGDVGDPCTLKAAVENC--N  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~-----~~----~~~v~~v~~Dltd~~~v~~a~~~~--D  228 (437)
                      ++|++||||-||.-|+.|++.|+++||.|+.+.|+.+.....     ..    ...+.++.+|++|...+.++++.+  |
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            468999999999999999999999999999999975421111     11    234889999999999999999976  9


Q ss_pred             EEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          229 KIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       229 ~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      -|+|+|+.....     +..+.+++..|+.++++|.+-.+. +..+..++.+  .-+.   .+  ..++-..-.|-.|.+
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS--E~fG---~v--~~~pq~E~TPFyPrS  153 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS--ELYG---LV--QEIPQKETTPFYPRS  153 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH--Hhhc---Cc--ccCccccCCCCCCCC
Confidence            999999975432     566889999999999999988774 3444433211  0011   01  111212224555679


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCc------cce---------ec---------ccc--CCCcccHHHHHH
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGG------YVE---------LS---------KKL--SLPLGCTLDRYE  356 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G------~~~---------i~---------~~~--~~p~g~v~D~~~  356 (437)
                      +|+.+|.-+-.....+.+.|+.-.+.|.+||.-+      |+.         +.         .++  ....||..|-++
T Consensus       154 PYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe  233 (345)
T COG1089         154 PYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVE  233 (345)
T ss_pred             HHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHH
Confidence            9999999998889999999999999999999654      111         00         111  124569999999


Q ss_pred             HHHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC----C----------------ceecccCCCcccCCCCCC
Q 013761          357 GLVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVG----F----------------CRVRVPFSSFRPVKPDDP  415 (437)
Q Consensus       357 gi~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G----~----------------~~v~iP~~~~r~~~~~~~  415 (437)
                      ++++.+. ...+-|++  .++.   ..|++||++..++..|    |                ..+.|.-.-|||...+-.
T Consensus       234 ~mwlmLQq~~PddyVi--ATg~---t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~L  308 (345)
T COG1089         234 AMWLMLQQEEPDDYVI--ATGE---THSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLL  308 (345)
T ss_pred             HHHHHHccCCCCceEE--ecCc---eeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhh
Confidence            9999995 44677877  4443   4689999999999988    3                234566677899999999


Q ss_pred             CCCHHHHhhccceeecccC
Q 013761          416 PMDPFLVHTMTIRFEPRRQ  434 (437)
Q Consensus       416 ~ld~~ki~~~gi~fep~~~  434 (437)
                      .-|++|+++. ++|+|+..
T Consensus       309 lgdp~KA~~~-LGW~~~~~  326 (345)
T COG1089         309 LGDPTKAKEK-LGWRPEVS  326 (345)
T ss_pred             cCCHHHHHHH-cCCccccC
Confidence            9999999987 89999753

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.78  E-value=3.4e-17  Score=160.31  Aligned_cols=233  Identities=13%  Similarity=0.091  Sum_probs=151.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc--cEEEEeccCCCCc
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC--NKIIYCATARSTI  240 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh~Ag~~~~~  240 (437)
                      +||||||||+||++|+++|+++|++|++++|.                .+|+.|.+++.++++++  |+|||+||.....
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            48999999999999999999999999999885                37999999999999976  9999999975432


Q ss_pred             -----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          241 -----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       241 -----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                           ....+++|+.++.++++++++.++++.++++. .|+...   ...+.+.       .|..+.+.|+.+|..++..
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~---~~~~~E~-------~~~~~~~~Y~~~K~~~E~~  134 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEG---KRPYRED-------DATNPLNVYGQSKLAGEQA  134 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCC---CCCCCCC-------CCCCCcchhhHHHHHHHHH
Confidence                 35578999999999999999988777666642 121100   0011111       1112234566666665544


Q ss_pred             hhhhhcccccceeeeeeeccCccce-------e----c--ccc------CCCcccHHHHHHHHHHHhcc---CCcEEEEE
Q 013761          315 AKFELSETGDAVFSGYVFTRGGYVE-------L----S--KKL------SLPLGCTLDRYEGLVLSVGG---NGRSYVLI  372 (437)
Q Consensus       315 ~~~~~~~~~~~v~~g~~~~~~G~~~-------i----~--~~~------~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~  372 (437)
                      ....    +..+...|+...||...       +    .  ..+      .....|++|+++++..++..   .++.|++ 
T Consensus       135 ~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni-  209 (287)
T TIGR01214       135 IRAA----GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHL-  209 (287)
T ss_pred             HHHh----CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEE-
Confidence            4322    22344444444443210       0    0  000      01123799999999998843   4677766 


Q ss_pred             ccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcc----------cCCCCCCCCCHHHHhhccceeec
Q 013761          373 LEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFR----------PVKPDDPPMDPFLVHTMTIRFEP  431 (437)
Q Consensus       373 l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r----------~~~~~~~~ld~~ki~~~gi~fep  431 (437)
                       .++.   .+++.|+++.+.+.+|.....++.....          ...+....+|.+|++++ ++|++
T Consensus       210 -~~~~---~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-lg~~~  273 (287)
T TIGR01214       210 -ANSG---QCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKT-LGTPL  273 (287)
T ss_pred             -ECCC---CcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHH-cCCCC
Confidence             3332   4789999999999998543322211111          11234457999999998 67754

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.78  E-value=1.1e-17  Score=165.02  Aligned_cols=240  Identities=17%  Similarity=0.097  Sum_probs=160.9

Q ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCC----
Q 013761          165 LVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARS----  238 (437)
Q Consensus       165 LVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~----  238 (437)
                      |||||+||||++|++.|++.|++|+++.+..               .+|++|.+++.++++.  +|+|||+|+...    
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~---------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK---------------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc---------------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            6999999999999999999999988765321               4899999999999885  599999998643    


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccc-hhhhhhhhccc
Q 013761          239 --TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQ-DVVAFKYDAGM  313 (437)
Q Consensus       239 --~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~-~y~~sk~a~~~  313 (437)
                        ..+...+++|+.++.++++++++.+++ +.++++. .|+...   ...+.|+...   ..|..+.. .|+.+|..++.
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~---~~~~~E~~~~---~~~~~p~~~~Y~~sK~~~e~  139 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFA---PQPIPETALL---TGPPEPTNEWYAIAKIAGIK  139 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCC---CCCCCHHHhc---cCCCCCCcchHHHHHHHHHH
Confidence              124568899999999999999999875 6666542 232111   0112222110   01222223 38889998887


Q ss_pred             chhhhhcccccceeeeeeeccCcccee------------c----------cccCC---------CcccHHHHHHHHHHHh
Q 013761          314 DAKFELSETGDAVFSGYVFTRGGYVEL------------S----------KKLSL---------PLGCTLDRYEGLVLSV  362 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G~~~i------------~----------~~~~~---------p~g~v~D~~~gi~l~~  362 (437)
                      ....+..+++..+...+++..||....            .          ..+..         ...|++|++++++.++
T Consensus       140 ~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~  219 (306)
T PLN02725        140 MCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLM  219 (306)
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHH
Confidence            776666666777777776666653210            0          00000         1238999999999888


Q ss_pred             cc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          363 GG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       363 ~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ..  .++.|  |++++.   ..++.|+++.+.+.+|.+ ..+.+...++.......+|.+|++.  ++|+|+.
T Consensus       220 ~~~~~~~~~--ni~~~~---~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~--lg~~p~~  284 (306)
T PLN02725        220 RRYSGAEHV--NVGSGD---EVTIKELAELVKEVVGFE-GELVWDTSKPDGTPRKLMDSSKLRS--LGWDPKF  284 (306)
T ss_pred             hccccCcce--EeCCCC---cccHHHHHHHHHHHhCCC-CceeecCCCCCcccccccCHHHHHH--hCCCCCC
Confidence            53  34455  555543   568999999999998852 2333333334334455789999975  5788863

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.77  E-value=5.3e-17  Score=160.71  Aligned_cols=254  Identities=17%  Similarity=0.137  Sum_probs=155.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHh--cccEEEEeccC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATA  236 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~  236 (437)
                      +||||||+|+||++|++.|+++|++|++++|....  .......  ..+.++.+|++|.+++.++++  ++|+|||+||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            48999999999999999999999999988764331  1111111  157788999999999999997  57999999997


Q ss_pred             CCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhh
Q 013761          237 RST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKY  309 (437)
Q Consensus       237 ~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~  309 (437)
                      ...     ...+.+++|+.++.++++++.+.+++ +.++++. .|+....   ..+.++       .|..+...|+.+|.
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~---~~~~e~-------~~~~~~~~y~~sK~  150 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSS---IPISED-------SPLGPINPYGRSKL  150 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCC---CCcccc-------CCCCCCCchHHHHH
Confidence            532     24467899999999999999988864 4444321 1110000   001111       11112344556665


Q ss_pred             hcccchhhhhcc-cccceeeeeeeccCccce--------------------e---c-c-------ccCC-------Cccc
Q 013761          310 DAGMDAKFELSE-TGDAVFSGYVFTRGGYVE--------------------L---S-K-------KLSL-------PLGC  350 (437)
Q Consensus       310 a~~~~~~~~~~~-~~~~v~~g~~~~~~G~~~--------------------i---~-~-------~~~~-------p~g~  350 (437)
                      ..+........+ .+......|++..||...                    .   . .       .+..       ...|
T Consensus       151 ~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  230 (328)
T TIGR01179       151 MSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH  230 (328)
T ss_pred             HHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeee
Confidence            555444333222 334444444444333100                    0   0 0       0000       1127


Q ss_pred             HHHHHHHHHHHhc-----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhc
Q 013761          351 TLDRYEGLVLSVG-----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       351 v~D~~~gi~l~~~-----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~  425 (437)
                      ++|++++++.++.     ..++.|++  .++.   ..+++|+++.+.+..|.+ +.+.+....+.......+|..++++.
T Consensus       231 ~~D~a~~~~~~~~~~~~~~~~~~~n~--~~~~---~~s~~ei~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (328)
T TIGR01179       231 VMDLADAHLAALEYLLNGGESHVYNL--GYGQ---GFSVLEVIEAFKKVSGVD-FPVELAPRRPGDPASLVADASKIRRE  304 (328)
T ss_pred             HHHHHHHHHHHHhhhhcCCCcceEEc--CCCC---cccHHHHHHHHHHHhCCC-cceEeCCCCCccccchhcchHHHHHH
Confidence            9999999998873     23566755  3332   468999999999999842 22222222222233445789999887


Q ss_pred             cceeeccc
Q 013761          426 TIRFEPRR  433 (437)
Q Consensus       426 gi~fep~~  433 (437)
                       ++|+|+.
T Consensus       305 -lg~~p~~  311 (328)
T TIGR01179       305 -LGWQPKY  311 (328)
T ss_pred             -hCCCCCc
Confidence             7888864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05865 hypothetical protein; Provisional

Probab=99.76  E-value=3.3e-17  Score=181.50  Aligned_cols=235  Identities=19%  Similarity=0.211  Sum_probs=160.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT  241 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~  241 (437)
                      |+|+||||+||||++++++|+++|++|++++|+....    ....+.++.+|++|.+++.++++++|+|||+|+....  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            4799999999999999999999999999999975321    2236789999999999999999999999999986432  


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhc
Q 013761          242 GDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       242 ~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                        .+++|+.|+.++++++++.+++ +.++++.    .|...|.++...+++++++||+.++.+.... .      .....
T Consensus        75 --~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~----~K~aaE~ll~~~gl~~vILRp~~VYGP~~~~-~------i~~ll  141 (854)
T PRK05865         75 --NDHINIDGTANVLKAMAETGTGRIVFTSSG----HQPRVEQMLADCGLEWVAVRCALIFGRNVDN-W------VQRLF  141 (854)
T ss_pred             --hHHHHHHHHHHHHHHHHHcCCCeEEEECCc----HHHHHHHHHHHcCCCEEEEEeceEeCCChHH-H------HHHHh
Confidence              5789999999999999999875 5555543    2777777777778999999998766543110 0      00000


Q ss_pred             ccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          321 ETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       321 ~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                        ...     ++. .|......+    ..|++|++++++.++..   .++.|++  +++.   .++++|+++.+.+....
T Consensus       142 --~~~-----v~~-~G~~~~~~d----fIhVdDVA~Ai~~aL~~~~~~ggvyNI--gsg~---~~Si~EIae~l~~~~~~  204 (854)
T PRK05865        142 --ALP-----VLP-AGYADRVVQ----VVHSDDAQRLLVRALLDTVIDSGPVNL--AAPG---ELTFRRIAAALGRPMVP  204 (854)
T ss_pred             --cCc-----eec-cCCCCceEe----eeeHHHHHHHHHHHHhCCCcCCCeEEE--ECCC---cccHHHHHHHHhhhhcc
Confidence              000     111 111111112    23799999999988742   3566766  4433   46899999988764320


Q ss_pred             ceecccCCCc--ccC--CCCCCCCCHHHHhhccceeeccc
Q 013761          398 CRVRVPFSSF--RPV--KPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       398 ~~v~iP~~~~--r~~--~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ....++....  ...  ....+.+|.+|+++. ++|+|+.
T Consensus       205 v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~-LGw~P~~  243 (854)
T PRK05865        205 IGSPVLRRVTSFAELELLHSAPLMDVTLLRDR-WGFQPAW  243 (854)
T ss_pred             CCchhhhhccchhhhhcccCCccCCHHHHHHH-hCCCCCC
Confidence            0000111000  000  112457899999998 8999975

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.76  E-value=5.6e-18  Score=160.62  Aligned_cols=143  Identities=22%  Similarity=0.204  Sum_probs=115.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC-CCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP-RSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~-~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      .+.+|.++|||||+|||.+++++|++.|++|++.+|+.+.  +...++. ..+..+..||+|.++++++++.       +
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            3567899999999999999999999999999999999872  3444555 5788999999999998777763       5


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||....         .|+.++++|+.|.++.++++      +|.|..+..|       .+++.+|+.+....|+
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~av------LP~m~~r~~G-------~IiN~~SiAG~~~y~~  149 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAV------LPGMVERKSG-------HIINLGSIAGRYPYPG  149 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHh------hhHHHhcCCc-------eEEEeccccccccCCC
Confidence            999999997532         27889999999999999999      8888877665       5788888877666665


Q ss_pred             cccchhhhhhhhcccch
Q 013761          299 TYFQDVVAFKYDAGMDA  315 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~  315 (437)
                        -..|+.+|+....+.
T Consensus       150 --~~vY~ATK~aV~~fs  164 (246)
T COG4221         150 --GAVYGATKAAVRAFS  164 (246)
T ss_pred             --CccchhhHHHHHHHH
Confidence              445777776554443

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.75  E-value=3e-17  Score=170.93  Aligned_cols=247  Identities=16%  Similarity=0.110  Sum_probs=169.7

Q ss_pred             chhhhhHhhhcCCCCccCC--CCCCCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-----HHHhh-C-CCC
Q 013761          137 DKDSLDALLIREGPMCEFA--IPGAQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-----EVVDM-L-PRS  206 (437)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~--~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-----~~~~~-~-~~~  206 (437)
                      +...+++.|.|.....+..  ...+.+|+||||||+|.||+++|+++++.+ .++++++|++..     ..+.. . ...
T Consensus       224 reI~ieDLLgR~pV~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~  303 (588)
T COG1086         224 REIEIEDLLGRPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELK  303 (588)
T ss_pred             ccCCHHHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcc
Confidence            4456777787765544432  334789999999999999999999999998 578888988652     11122 1 257


Q ss_pred             eEEEEecCCCHHHHHHHHhc--ccEEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCCcchhh
Q 013761          207 VEIVLGDVGDPCTLKAAVEN--CNKIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGKSSKSK  278 (437)
Q Consensus       207 v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~~g~sk  278 (437)
                      +.++-+|+.|.+.++.++++  +|+|||+|+.-+.+     +.+.+.+|+.||.|+++||.+++|+ +..+++++.    
T Consensus       304 ~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA----  379 (588)
T COG1086         304 LRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA----  379 (588)
T ss_pred             eEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc----
Confidence            88899999999999999999  89999999986654     6789999999999999999999997 555554321    


Q ss_pred             hhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcccc---cceeeeeeeccCc----ccee-----c--ccc
Q 013761          279 LLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETG---DAVFSGYVFTRGG----YVEL-----S--KKL  344 (437)
Q Consensus       279 ~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~~v~~g~~~~~~G----~~~i-----~--~~~  344 (437)
                                      ++|   .+.+|.+|..+++..........   ...+..|+.|.-|    ++..     .  ..+
T Consensus       380 ----------------V~P---tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~Ggpl  440 (588)
T COG1086         380 ----------------VNP---TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPL  440 (588)
T ss_pred             ----------------cCC---chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCc
Confidence                            123   35567777777766654443222   2333333333222    1110     0  000


Q ss_pred             C--CCc-----ccHHHHHHHHHHHh--ccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC---CceecccCCCcccCC
Q 013761          345 S--LPL-----GCTLDRYEGLVLSV--GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVG---FCRVRVPFSSFRPVK  411 (437)
Q Consensus       345 ~--~p~-----g~v~D~~~gi~l~~--~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G---~~~v~iP~~~~r~~~  411 (437)
                      .  .|.     --+.++++-++.+.  ..+|+.|++-.|.     ...+.|+++.+.+..|   ..++.|-+...||+.
T Consensus       441 TvTdp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGe-----pvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGE  514 (588)
T COG1086         441 TVTDPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGE-----PVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGE  514 (588)
T ss_pred             cccCCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCC-----CeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCch
Confidence            0  000     03778888888776  5778888884332     3679999999999998   234556677788873

>PLN02778 3,5-epimerase/4-reductase

Probab=99.75  E-value=7.7e-17  Score=160.24  Aligned_cols=235  Identities=9%  Similarity=-0.009  Sum_probs=148.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~  237 (437)
                      ..|+||||||+||||++|+++|+++|++|++..                   .|+.|.+.+...++  ++|+|||+||..
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~   68 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVT   68 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCccc
Confidence            457899999999999999999999999987532                   35556666777776  579999999976


Q ss_pred             CC--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhh-hhh--hhhccCCCCcceeeccCcccchhh
Q 013761          238 ST--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSK-LLL--AKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       238 ~~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk-~~~--~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      ..        .+.+.+++|+.|+.+++++|++.++++.++++.. |+... ...  ...+.++.      .|..+.+.|+
T Consensus        69 ~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~------~p~~~~s~Yg  142 (298)
T PLN02778         69 GRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEED------TPNFTGSFYS  142 (298)
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCC------CCCCCCCchH
Confidence            42        1356899999999999999999999866665432 22110 000  00111211      1222346799


Q ss_pred             hhhhhcccchhhhhcccccceeeeeeeccC---ccce-e--ccc-c--CCCcccHHHHHHHHHHHhc-cCCcEEEEEccC
Q 013761          306 AFKYDAGMDAKFELSETGDAVFSGYVFTRG---GYVE-L--SKK-L--SLPLGCTLDRYEGLVLSVG-GNGRSYVLILEA  375 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~---G~~~-i--~~~-~--~~p~g~v~D~~~gi~l~~~-~~Ge~y~l~l~~  375 (437)
                      .+|..++.....+...+..........+..   .++. +  ... +  .....|++|++++++..+. +.++.|++  ++
T Consensus       143 ~sK~~~E~~~~~y~~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~~g~yNi--gs  220 (298)
T PLN02778        143 KTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNF--TN  220 (298)
T ss_pred             HHHHHHHHHHHHhhccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCCCCeEEe--CC
Confidence            999999988765544333222110111100   0111 0  011 1  1123489999999999884 33446654  55


Q ss_pred             CCCCCCCcHHHHHHHHHhhhCC----ceecccCCCc--ccCCCCCCCCCHHHHhhc
Q 013761          376 GPSADRSQSKLYFARFSTKVGF----CRVRVPFSSF--RPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       376 ~~~~~~~s~~e~~~~i~~~~G~----~~v~iP~~~~--r~~~~~~~~ld~~ki~~~  425 (437)
                      +.   .++..|+++.+.+..|.    ..+.++ ...  .......+.||.+|++++
T Consensus       221 ~~---~iS~~el~~~i~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~Ld~~k~~~~  272 (298)
T PLN02778        221 PG---VVSHNEILEMYRDYIDPSFTWKNFTLE-EQAKVIVAPRSNNELDTTKLKRE  272 (298)
T ss_pred             CC---cccHHHHHHHHHHHhCCCceeccccHH-HHHHHHhCCCccccccHHHHHHh
Confidence            53   57899999999999983    334444 221  222334558999999876

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.5e-17  Score=159.64  Aligned_cols=100  Identities=23%  Similarity=0.279  Sum_probs=82.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKII  231 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~VI  231 (437)
                      .|++|||||+||||++++++|+++|++|++++|+.+.  .........+.++.+|++|.+++.++++.       +|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999999999999999999999999999998652  12223345788999999999999887764       69999


Q ss_pred             EeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          232 YCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       232 h~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||||.....         +++.+++|+.|++++++++.
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~  119 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAAL  119 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            999975321         35688999999999999983

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=3.4e-16  Score=152.80  Aligned_cols=237  Identities=14%  Similarity=0.146  Sum_probs=167.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc--cEEEEeccCCCCc
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC--NKIIYCATARSTI  240 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh~Ag~~~~~  240 (437)
                      +|||||++|.+|.+|++.|. .+++|+.++|..                +||+|++.+.+++...  |+|||+|+++..+
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD   64 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD   64 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence            49999999999999999988 779999998863                7999999999999865  9999999987644


Q ss_pred             -----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccch
Q 013761          241 -----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDA  315 (437)
Q Consensus       241 -----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~  315 (437)
                           ++..+.+|..|+.+++++|.+.|.++.++++.-...         ...+-+|..-.+..|.+-||.+|+.+|...
T Consensus        65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFD---------G~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v  135 (281)
T COG1091          65 KAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFD---------GEKGGPYKETDTPNPLNVYGRSKLAGEEAV  135 (281)
T ss_pred             cccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEec---------CCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Confidence                 566899999999999999999999999988642110         111223333345557888999999998877


Q ss_pred             hhhhcccccceeeeeeeccCc--cce-------------eccccCCCcccHHHHHHHHHHHhcc--CCcEEEEEccCCCC
Q 013761          316 KFELSETGDAVFSGYVFTRGG--YVE-------------LSKKLSLPLGCTLDRYEGLVLSVGG--NGRSYVLILEAGPS  378 (437)
Q Consensus       316 ~~~~~~~~~~v~~g~~~~~~G--~~~-------------i~~~~~~p~g~v~D~~~gi~l~~~~--~Ge~y~l~l~~~~~  378 (437)
                      ..... ....+...|+++.+|  |+.             +..+...-..++.|+++++...+..  .+..|.+.  +.+ 
T Consensus       136 ~~~~~-~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~--~~g-  211 (281)
T COG1091         136 RAAGP-RHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLV--NSG-  211 (281)
T ss_pred             HHhCC-CEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEe--CCC-
Confidence            65543 334566778888776  221             1111111113799999999998743  34477764  322 


Q ss_pred             CCCCcHHHHHHHHHhhhCCce-ec--ccCC--CcccCCCCCCCCCHHHHhhccceeecc
Q 013761          379 ADRSQSKLYFARFSTKVGFCR-VR--VPFS--SFRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       379 ~~~~s~~e~~~~i~~~~G~~~-v~--iP~~--~~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                        .+|.-||+..+.+..|+.. +.  ++-.  +.....|....||..|++.. +++.|+
T Consensus       212 --~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~-~g~~~~  267 (281)
T COG1091         212 --ECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKA-FGLSLP  267 (281)
T ss_pred             --cccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHH-hCCCCc
Confidence              3578899999999988543 11  1111  11122355678999999877 555443

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.72  E-value=2e-17  Score=161.59  Aligned_cols=149  Identities=21%  Similarity=0.145  Sum_probs=117.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H-----HHhhCCCC-eEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E-----VVDMLPRS-VEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~-----~~~~~~~~-v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      .+.+|+|+|||||+|||.++|.+|+++|+++++++|.... +     ..+..+.. +.++++|++|.++++++++.    
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999888887652 1     12233444 99999999999999988753    


Q ss_pred             ---ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 ---CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                         +|+||||||+....         ...+|++|+.|+..+++++      +|+|.....|       +++..+|+.++.
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~a------lp~m~~r~~G-------hIVvisSiaG~~  155 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAA------LPSMKKRNDG-------HIVVISSIAGKM  155 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHH------HHHhhhcCCC-------eEEEEecccccc
Confidence               59999999986532         3458999999999999999      8888866544       688888888776


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      .-|.  ...|.++|++..-+......|
T Consensus       156 ~~P~--~~~Y~ASK~Al~~f~etLR~E  180 (282)
T KOG1205|consen  156 PLPF--RSIYSASKHALEGFFETLRQE  180 (282)
T ss_pred             CCCc--ccccchHHHHHHHHHHHHHHH
Confidence            6564  447888888876655433333

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.72  E-value=5.7e-17  Score=160.35  Aligned_cols=239  Identities=16%  Similarity=0.198  Sum_probs=147.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~~  239 (437)
                      |+||||||+|+||++|++.|.++|++|+.+.|.                .+|++|.+.+.++++.  .|+||||||+...
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            689999999999999999999999999999775                4799999999999986  5999999998754


Q ss_pred             c-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          240 I-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       240 ~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                      .     ++..+.+|+.++.+++++|.+.++++.++++......         ..+.++..-.+..+.+.||.+|+.+|..
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG---------~~~~~y~E~d~~~P~~~YG~~K~~~E~~  135 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDG---------DKGGPYTEDDPPNPLNVYGRSKLEGEQA  135 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-S---------STSSSB-TTS----SSHHHHHHHHHHHH
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcC---------CcccccccCCCCCCCCHHHHHHHHHHHH
Confidence            3     5668999999999999999999999999986522110         1122222223444678899999988877


Q ss_pred             hhhhhcccccceeeeeeeccCc--cce-------------eccccCCCcccHHHHHHHHHHHhccC------CcEEEEEc
Q 013761          315 AKFELSETGDAVFSGYVFTRGG--YVE-------------LSKKLSLPLGCTLDRYEGLVLSVGGN------GRSYVLIL  373 (437)
Q Consensus       315 ~~~~~~~~~~~v~~g~~~~~~G--~~~-------------i~~~~~~p~g~v~D~~~gi~l~~~~~------Ge~y~l~l  373 (437)
                      ...... ....+..+++++..+  +..             +..+...-..++.|+++.++..+...      ...|.+. 
T Consensus       136 v~~~~~-~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~-  213 (286)
T PF04321_consen  136 VRAACP-NALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLS-  213 (286)
T ss_dssp             HHHH-S-SEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---
T ss_pred             HHHhcC-CEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEe-
Confidence            654333 223344455555532  110             00111001127999999999888432      3567663 


Q ss_pred             cCCCCCCCCcHHHHHHHHHhhhCCce---ecccCCCcc--cCCCCCCCCCHHHHhhccceeecc
Q 013761          374 EAGPSADRSQSKLYFARFSTKVGFCR---VRVPFSSFR--PVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       374 ~~~~~~~~~s~~e~~~~i~~~~G~~~---v~iP~~~~r--~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                       ..   +.+|..|+++.+++..|...   ..++...+.  ...+.+..||..|++.. ++++++
T Consensus       214 -~~---~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~-~g~~~~  272 (286)
T PF04321_consen  214 -GP---ERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNL-LGIKPP  272 (286)
T ss_dssp             --B---S-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHC-TTS---
T ss_pred             -cC---cccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHc-cCCCCc
Confidence             32   25789999999999998322   223333321  22355669999999988 555553

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.72  E-value=1.6e-16  Score=150.36  Aligned_cols=198  Identities=21%  Similarity=0.182  Sum_probs=143.9

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc--cEEEEeccCCCC--
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC--NKIIYCATARST--  239 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh~Ag~~~~--  239 (437)
                      ||||||+|+||++|+++|+++|+.|+.+.|+............+.++.+|+.|.+.++++++..  |+|||+|+....  
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            7999999999999999999999999999988764322221127899999999999999999987  999999997532  


Q ss_pred             ---chhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          240 ---ITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       240 ---~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                         .....++.|+.++.++++++.+.++ ++.++++. .|+..   ....+.+.       .|..+.+.|+.+|...+..
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~---~~~~~~e~-------~~~~~~~~Y~~~K~~~e~~  150 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP---DGEPIDED-------SPINPLSPYGASKRAAEEL  150 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS---SSSSBETT-------SGCCHSSHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc---cccccccc-------ccccccccccccccccccc
Confidence               2456899999999999999999998 56666542 22211   00111222       2223457799999999988


Q ss_pred             hhhhhcccccceeeeeeeccCccc---ee--------c------cccCC--------CcccHHHHHHHHHHHhc-c--CC
Q 013761          315 AKFELSETGDAVFSGYVFTRGGYV---EL--------S------KKLSL--------PLGCTLDRYEGLVLSVG-G--NG  366 (437)
Q Consensus       315 ~~~~~~~~~~~v~~g~~~~~~G~~---~i--------~------~~~~~--------p~g~v~D~~~gi~l~~~-~--~G  366 (437)
                      ...+..+.+......++.+.||..   ..        .      +.+..        ...|++|++++++.++. .  .+
T Consensus       151 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  230 (236)
T PF01370_consen  151 LRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAG  230 (236)
T ss_dssp             HHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTT
T ss_pred             ccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCC
Confidence            887777777777777777766654   10        0      10111        11289999999999883 2  47


Q ss_pred             cEEEE
Q 013761          367 RSYVL  371 (437)
Q Consensus       367 e~y~l  371 (437)
                      +.|+|
T Consensus       231 ~~yNi  235 (236)
T PF01370_consen  231 GIYNI  235 (236)
T ss_dssp             EEEEE
T ss_pred             CEEEe
Confidence            78866

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK06194 hypothetical protein; Provisional

Probab=99.71  E-value=4.4e-17  Score=159.72  Aligned_cols=157  Identities=16%  Similarity=0.073  Sum_probs=108.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC---CCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML---PRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      .+.++++|||||+||||++++++|+++|++|++++|+.+.  +....+   ..++.++.+|++|.++++++++.      
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3667899999999999999999999999999999997542  122221   34678899999999999998875      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                       +|+||||||.....         ++..+++|+.|+.++++++      ++.|....... .....+++..++.......
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~~  155 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF------TPLMLAAAEKD-PAYEGHIVNTASMAGLLAP  155 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHH------HHHHHhcCCCC-CCCCeEEEEeCChhhccCC
Confidence             59999999985421         4567999999999999987      44332211100 0000134444544332222


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      |  ....|+.+|...+.+......+++
T Consensus       156 ~--~~~~Y~~sK~a~~~~~~~l~~e~~  180 (287)
T PRK06194        156 P--AMGIYNVSKHAVVSLTETLYQDLS  180 (287)
T ss_pred             C--CCcchHHHHHHHHHHHHHHHHHHh
Confidence            2  356789999887777655444443

>PRK12320 hypothetical protein; Provisional

Probab=99.71  E-value=3.9e-16  Score=169.78  Aligned_cols=199  Identities=16%  Similarity=0.157  Sum_probs=130.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT  241 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~  241 (437)
                      |+||||||+||||++|+++|+++|++|++++|....    .....++++.+|++|.. +.+++.++|+|||+|+....  
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~----~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~--   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD----ALDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS--   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh----cccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc--
Confidence            479999999999999999999999999999986532    12346889999999985 78888899999999987432  


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchh--hhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhh
Q 013761          242 GDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKS--KLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFEL  319 (437)
Q Consensus       242 ~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~s--k~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~  319 (437)
                       ....+|+.|+.+++++|++.++++.++++. ++..  ....|.++....++++++|+...+.+...... . . .+..+
T Consensus        74 -~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~-~G~~~~~~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~-~-r-~I~~~  148 (699)
T PRK12320         74 -APGGVGITGLAHVANAAARAGARLLFVSQA-AGRPELYRQAETLVSTGWAPSLVIRIAPPVGRQLDWMV-C-R-TVATL  148 (699)
T ss_pred             -chhhHHHHHHHHHHHHHHHcCCeEEEEECC-CCCCccccHHHHHHHhcCCCEEEEeCceecCCCCcccH-h-H-HHHHH
Confidence             223689999999999999999987777643 2211  11234444444566677776543332110000 0 0 00000


Q ss_pred             cccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhccC-CcEEEEEccCCCCCCCCcHHHHHHHHHhh
Q 013761          320 SETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGN-GRSYVLILEAGPSADRSQSKLYFARFSTK  394 (437)
Q Consensus       320 ~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~-Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~  394 (437)
                      ...   .      ..        .-.+...||+|++++++.++... ++.|  |++++.   .+|++|+++.+...
T Consensus       149 l~~---~------~~--------~~pI~vIyVdDvv~alv~al~~~~~Giy--NIG~~~---~~Si~el~~~i~~~  202 (699)
T PRK12320        149 LRS---K------VS--------ARPIRVLHLDDLVRFLVLALNTDRNGVV--DLATPD---TTNVVTAWRLLRSV  202 (699)
T ss_pred             HHH---H------Hc--------CCceEEEEHHHHHHHHHHHHhCCCCCEE--EEeCCC---eeEHHHHHHHHHHh
Confidence            000   0      00        00011248999999999988532 3355  556554   57899988888654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.1e-16  Score=171.24  Aligned_cols=225  Identities=15%  Similarity=0.142  Sum_probs=135.4

Q ss_pred             CEEEEECCCChHHHHHHHHHH--HCCCeEEEEecCCcHHHHh----hC-CCCeEEEEecCCCH------HHHHHHHhccc
Q 013761          162 TTVLVVGATSRIGRIVIRKLM--LRGYSVKALVRKADQEVVD----ML-PRSVEIVLGDVGDP------CTLKAAVENCN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll--~~G~~V~~~~R~~~~~~~~----~~-~~~v~~v~~Dltd~------~~v~~a~~~~D  228 (437)
                      |+|||||||||||++|+++|+  ..|++|++++|+.......    .. ..+++++.+|++|+      +.++++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            479999999999999999999  5899999999975432211    11 24789999999984      456665 8899


Q ss_pred             EEEEeccCCCC--chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-----------------------Ccchhhhhhh
Q 013761          229 KIIYCATARST--ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-----------------------KSSKSKLLLA  282 (437)
Q Consensus       229 ~VIh~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-----------------------~~g~sk~~~~  282 (437)
                      +|||+||....  ......++|+.|+.++++++++.+++ +.++++.                       .|+.+|...|
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence            99999997543  24567899999999999999998765 4444421                       1333444444


Q ss_pred             hhcc-CCCCcceeeccCcccchhhhhhhh---cccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHH
Q 013761          283 KFKS-ADSLNGWEVRQGTYFQDVVAFKYD---AGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGL  358 (437)
Q Consensus       283 k~v~-~ssl~~~i~rP~~~~~~y~~sk~a---~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi  358 (437)
                      .++. ..+++++++||+..+++.......   ..............  ...+.... +....  .  ....+++|+++++
T Consensus       160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~--~--~~~v~vddva~ai  232 (657)
T PRK07201        160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAK--LPSWLPMV-GPDGG--R--TNIVPVDYVADAL  232 (657)
T ss_pred             HHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhcc--CCcccccc-cCCCC--e--eeeeeHHHHHHHH
Confidence            4433 234555555555333221100000   00000000000000  00000000 00000  0  1123699999999


Q ss_pred             HHHhc---cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce
Q 013761          359 VLSVG---GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR  399 (437)
Q Consensus       359 ~l~~~---~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~  399 (437)
                      ...+.   ..|+.|++  .++.   .+++.|+++.+.+.+|.+.
T Consensus       233 ~~~~~~~~~~g~~~ni--~~~~---~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        233 DHLMHKDGRDGQTFHL--TDPK---PQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             HHHhcCcCCCCCEEEe--CCCC---CCcHHHHHHHHHHHhCCCc
Confidence            88774   34677766  3332   4789999999999998543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.70  E-value=1.7e-16  Score=155.79  Aligned_cols=221  Identities=18%  Similarity=0.167  Sum_probs=129.6

Q ss_pred             EEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhC-----CCCeE----EEEecCCCHHHHHHHHh--cccE
Q 013761          164 VLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDML-----PRSVE----IVLGDVGDPCTLKAAVE--NCNK  229 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~-----~~~v~----~v~~Dltd~~~v~~a~~--~~D~  229 (437)
                      ||||||+|.||++||++|++.+ .++++++|++..  ....++     ...+.    .+.+|++|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999998 589999998752  122222     22343    45899999999999999  7899


Q ss_pred             EEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCCcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          230 IIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       230 VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      |||.|+.-+.+     +.+.+++|+.||.|++++|.+++++ +..+++++.                    ++|   .+.
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------------v~P---tnv  137 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------------VNP---TNV  137 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------------SS-----SH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------------CCC---CcH
Confidence            99999986543     6778999999999999999999986 555554421                    022   244


Q ss_pred             hhhhhhhcccchhhhhccc---ccceeeeeeeccCc-----------------cceec-cccCCCcccHHHHHHHHHHHh
Q 013761          304 VVAFKYDAGMDAKFELSET---GDAVFSGYVFTRGG-----------------YVELS-KKLSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~---~~~v~~g~~~~~~G-----------------~~~i~-~~~~~p~g~v~D~~~gi~l~~  362 (437)
                      +|++|.-+++.........   .......|+.|..|                 ...+. .++..-.--++++++-++.+.
T Consensus       138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~  217 (293)
T PF02719_consen  138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAA  217 (293)
T ss_dssp             HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHH
Confidence            5666666665554433333   22233333333222                 11110 000000003677888777776


Q ss_pred             --ccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCc-----eecccCCCcccCCC
Q 013761          363 --GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFC-----RVRVPFSSFRPVKP  412 (437)
Q Consensus       363 --~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~-----~v~iP~~~~r~~~~  412 (437)
                        ...|+.|++..+..     +.+.|+++.+.+..|..     ++.|-+...||+..
T Consensus       218 ~~~~~geifvl~mg~~-----v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlRpGEK  269 (293)
T PF02719_consen  218 ALAKGGEIFVLDMGEP-----VKILDLAEAMIELSGLEPGKKPDIPIKFTGLRPGEK  269 (293)
T ss_dssp             HH--TTEEEEE---TC-----EECCCHHHHHHHHTT-EEEESSSS-EEE----TT--
T ss_pred             hhCCCCcEEEecCCCC-----cCHHHHHHHHHhhcccccccCCCcceEEcCCCCCcc
Confidence              46788888855433     57789999999998843     44566777787753

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.70  E-value=6.3e-17  Score=156.96  Aligned_cols=139  Identities=21%  Similarity=0.280  Sum_probs=108.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      .+++++++|||||+|||.++++.|+++|++|++++|+.+.  +..++    .+..+.++.+|++|++++.++.+      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            3678899999999999999999999999999999999872  22222    24467899999999999998876      


Q ss_pred             -cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|++|||||.....         ..+++++|+.++..+++++      ++.|.....|       .+++..|+.+.+.
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~------lp~m~~~~~G-------~IiNI~S~ag~~p  149 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAV------LPGMVERGAG-------HIINIGSAAGLIP  149 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHH------HHHHHhcCCc-------eEEEEechhhcCC
Confidence             369999999986432         3468999999999999999      6666655554       5777777665443


Q ss_pred             ccCcccchhhhhhhhc
Q 013761          296 RQGTYFQDVVAFKYDA  311 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~  311 (437)
                      .|  +...|+.+|...
T Consensus       150 ~p--~~avY~ATKa~v  163 (265)
T COG0300         150 TP--YMAVYSATKAFV  163 (265)
T ss_pred             Cc--chHHHHHHHHHH
Confidence            33  466677666543

>PLN00016 RNA-binding protein; Provisional

Probab=99.69  E-value=7.3e-16  Score=157.96  Aligned_cols=242  Identities=17%  Similarity=0.153  Sum_probs=151.8

Q ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HH--------hhC-CCCeEEEEecCCCHHHHHHHH
Q 013761          159 AQNTTVLVV----GATSRIGRIVIRKLMLRGYSVKALVRKADQE-VV--------DML-PRSVEIVLGDVGDPCTLKAAV  224 (437)
Q Consensus       159 l~~k~vLVT----GAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~--------~~~-~~~v~~v~~Dltd~~~v~~a~  224 (437)
                      .++++||||    ||||+||++|+++|+++|++|++++|+.... ..        ..+ ..+++++.+|+.|   +.+++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            456789999    9999999999999999999999999986521 10        111 2358899999987   44444


Q ss_pred             --hcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-Ccc----------------hhhhhhhhh
Q 013761          225 --ENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSS----------------KSKLLLAKF  284 (437)
Q Consensus       225 --~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g----------------~sk~~~~k~  284 (437)
                        .++|+|||+++.           ++.++.++++++++.|++ +.++++. .|+                .+|...|.+
T Consensus       127 ~~~~~d~Vi~~~~~-----------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~  195 (378)
T PLN00016        127 AGAGFDVVYDNNGK-----------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAY  195 (378)
T ss_pred             ccCCccEEEeCCCC-----------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHH
Confidence              468999999763           245678899999999985 5555432 121                135666677


Q ss_pred             ccCCCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc
Q 013761          285 KSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG  364 (437)
Q Consensus       285 v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~  364 (437)
                      +...++.++++||+.++++......  .. ..+.....+..+   .+.+.   ......    ..|++|++++++.++..
T Consensus       196 l~~~~l~~~ilRp~~vyG~~~~~~~--~~-~~~~~~~~~~~i---~~~g~---g~~~~~----~i~v~Dva~ai~~~l~~  262 (378)
T PLN00016        196 LQKLGVNWTSFRPQYIYGPGNNKDC--EE-WFFDRLVRGRPV---PIPGS---GIQLTQ----LGHVKDLASMFALVVGN  262 (378)
T ss_pred             HHHcCCCeEEEeceeEECCCCCCch--HH-HHHHHHHcCCce---eecCC---CCeeec----eecHHHHHHHHHHHhcC
Confidence            7777788888888866654321100  00 000000011110   01111   111111    23799999999998853


Q ss_pred             ---CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCCc-------ccCCCCCCCCCHHHHhhccceeecc
Q 013761          365 ---NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSSF-------RPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       365 ---~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~-------r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                         .|+.|++.  ++.   .+++.|+++.+.+..|.+.  +.++...+       .|........|++|++++ ++|+|+
T Consensus       263 ~~~~~~~yni~--~~~---~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~-LGw~p~  336 (378)
T PLN00016        263 PKAAGQIFNIV--SDR---AVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEE-LGWTPK  336 (378)
T ss_pred             ccccCCEEEec--CCC---ccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHh-cCCCCC
Confidence               36677663  332   4789999999999999532  11111111       111223345799999998 899997


Q ss_pred             c
Q 013761          433 R  433 (437)
Q Consensus       433 ~  433 (437)
                      .
T Consensus       337 ~  337 (378)
T PLN00016        337 F  337 (378)
T ss_pred             C
Confidence            4

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.69  E-value=4.9e-16  Score=156.59  Aligned_cols=235  Identities=16%  Similarity=0.161  Sum_probs=158.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH-----HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ-----EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~-----~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      .+.+++||||+||+|++|+++|+++|  .+|.++|.....     +........+.++.+|+.|...+..+++++ .|||
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            46799999999999999999999998  899999987641     111113568999999999999999999999 8888


Q ss_pred             eccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhh
Q 013761          233 CATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       233 ~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      +|+...+.     .+..+++|+.||.+++++|++.+++ +.+.++.. ....+.   -+...++.+    .|..+++.|+
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~---~~n~~E~~p----~p~~~~d~Y~  154 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEP---IINGDESLP----YPLKHIDPYG  154 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCee---cccCCCCCC----Cccccccccc
Confidence            88764432     4668999999999999999999997 44444321 111110   022233343    2444667899


Q ss_pred             hhhhhcccchhhhhcccccceeeeeeeccCccceec---------c---------cc--CCCcccHHHHHHHHHHHh---
Q 013761          306 AFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELS---------K---------KL--SLPLGCTLDRYEGLVLSV---  362 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~---------~---------~~--~~p~g~v~D~~~gi~l~~---  362 (437)
                      .+|..+|+..+-.........+..|....||..+..         +         ..  ..+..|+.+++-+++++.   
T Consensus       155 ~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL  234 (361)
T KOG1430|consen  155 ESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARAL  234 (361)
T ss_pred             hHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHH
Confidence            999988888766554334445556666666633210         0         00  011226777888888775   


Q ss_pred             -----ccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce---ecccCCCc
Q 013761          363 -----GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR---VRVPFSSF  407 (437)
Q Consensus       363 -----~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~---v~iP~~~~  407 (437)
                           .-.|+.|.|.-++.     ....+++..+.+.+|...   +.+|....
T Consensus       235 ~~~~~~~~Gq~yfI~d~~p-----~~~~~~~~~l~~~lg~~~~~~~~~p~~l~  282 (361)
T KOG1430|consen  235 LDKSPSVNGQFYFITDDTP-----VRFFDFLSPLVKALGYCLPSSIKLPLFLS  282 (361)
T ss_pred             HhcCCccCceEEEEeCCCc-----chhhHHHHHHHHhcCCCCCceeecchHHH
Confidence                 13588897743332     345566668888888432   34554443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.67  E-value=1.3e-15  Score=148.81  Aligned_cols=245  Identities=13%  Similarity=0.059  Sum_probs=136.4

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC--c-
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST--I-  240 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~--~-  240 (437)
                      ||||||+||||+++++.|+++|++|++++|+.....  ... ...  ..|+.+ +.+.+++.++|+|||+||....  . 
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~-~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGA--NTK-WEG--YKPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCC--ccc-cee--eecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            699999999999999999999999999999865311  110 011  123322 4556777889999999996432  1 


Q ss_pred             ----hhhHHHHHHHHHHHHHHHHHhcCCc-eeee--ec-CCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          241 ----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQL--RA-GKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       241 ----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l--~~-~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                          ...++++|+.++.++++++++++++ ..++  +. ..|+....   ..+.++..    ..|.   +.+...+...+
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~---~~~~E~~~----~~~~---~~~~~~~~~~e  144 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSED---RVFTEEDS----PAGD---DFLAELCRDWE  144 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCC---CCcCcccC----CCCC---ChHHHHHHHHH
Confidence                2457889999999999999999873 2222  21 11221100   01111110    0000   00111111111


Q ss_pred             cchhhhhcccccceeeeeeeccCccce---------e--c-------cccCCCcccHHHHHHHHHHHhcc--CCcEEEEE
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGYVE---------L--S-------KKLSLPLGCTLDRYEGLVLSVGG--NGRSYVLI  372 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~~~---------i--~-------~~~~~p~g~v~D~~~gi~l~~~~--~Ge~y~l~  372 (437)
                      ... ....+.+..+...|....||...         .  .       .....+..|++|++++++.++..  .++.|++ 
T Consensus       145 ~~~-~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~-  222 (292)
T TIGR01777       145 EAA-QAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNA-  222 (292)
T ss_pred             HHh-hhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEe-
Confidence            110 11112233334444433333110         0  0       00001223899999999999853  2345554 


Q ss_pred             ccCCCCCCCCcHHHHHHHHHhhhCCc-eecccCCCcccC------C-CCCCCCCHHHHhhccceee
Q 013761          373 LEAGPSADRSQSKLYFARFSTKVGFC-RVRVPFSSFRPV------K-PDDPPMDPFLVHTMTIRFE  430 (437)
Q Consensus       373 l~~~~~~~~~s~~e~~~~i~~~~G~~-~v~iP~~~~r~~------~-~~~~~ld~~ki~~~gi~fe  430 (437)
                       .++.   .++++|+++.+.+..|.+ .+.+|.+.+...      . ....++++++++.+|++|.
T Consensus       223 -~~~~---~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  284 (292)
T TIGR01777       223 -TAPE---PVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQ  284 (292)
T ss_pred             -cCCC---ccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeee
Confidence             4443   578999999999999842 233554433221      1 2345788999998555443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.6e-15  Score=146.90  Aligned_cols=102  Identities=24%  Similarity=0.236  Sum_probs=83.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      ++|++|||||+||||++++++|+++|++|++++|+.+..  ........+.++.+|++|.+++.+++++       +|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            468999999999999999999999999999999986531  1222234688899999999999888874       5999


Q ss_pred             EEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |||||.....         +.+.+++|+.|++++++++.+
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  122 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLP  122 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999975321         456799999999999998743

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.6e-15  Score=148.22  Aligned_cols=100  Identities=21%  Similarity=0.214  Sum_probs=83.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      ++|+||||||+|+||++++++|+++|++|++++|+.+.  .........+.++++|++|.+++.++++.       +|+|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            56899999999999999999999999999999998653  12233355688899999999999887764       5999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      |||||....         .+++++++|+.+++++++++
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  119 (275)
T PRK08263         82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAV  119 (275)
T ss_pred             EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            999997543         25678999999999999987

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.3e-15  Score=147.63  Aligned_cols=103  Identities=18%  Similarity=0.114  Sum_probs=84.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +|++|++|||||+||||++++++|+++|++|++++|+.+.  +..+.   ....+.++.+|++|.+++.++++.      
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3778999999999999999999999999999999998652  11222   234578899999999999988875      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                       +|+||||||+....         +++.+++|+.|+.++++++.
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  126 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFL  126 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence             59999999974321         45689999999999999984

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.65  E-value=1e-15  Score=147.05  Aligned_cols=256  Identities=15%  Similarity=0.114  Sum_probs=182.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHh--cccEEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVE--NCNKIIY  232 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh  232 (437)
                      +.++||||+||||++.+..+...  .++.+.++--.-   ...++..  ..+..++++|+.|...+.-.+.  .+|.|||
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            79999999999999999999875  466666554321   1112222  4578999999999999888886  4799999


Q ss_pred             eccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcC-C-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          233 CATARSTI-----TGDLFRVDYQGVYNVTKAFQDFN-N-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       233 ~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~g-v-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      .|+.....     .-++...|+.++..|+++++..| + ++.++++. .||.+-...  ...+.+.    +.   +.++|
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~--~~~E~s~----~n---Ptnpy  157 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA--VVGEASL----LN---PTNPY  157 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc--ccccccc----CC---CCCch
Confidence            99986543     44678899999999999999986 3 37777764 355332211  1112222    23   45889


Q ss_pred             hhhhhhcccchhhhhcccccceeeeeeeccCccceec--------------cccCCC-cc-------cHHHHHHHHHHHh
Q 013761          305 VAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELS--------------KKLSLP-LG-------CTLDRYEGLVLSV  362 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~--------------~~~~~p-~g-------~v~D~~~gi~l~~  362 (437)
                      ..+|.++++....+-..++.++...|..+.||.....              +.++.- .|       ||.|+++++..+.
T Consensus       158 AasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~  237 (331)
T KOG0747|consen  158 AASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVL  237 (331)
T ss_pred             HHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHH
Confidence            9999999999999999999999999999999943211              111110 11       8999999999988


Q ss_pred             c-cC-CcEEEEEccCCCCCCCCcHHHHHHHHHhhhC--Cceec----ccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          363 G-GN-GRSYVLILEAGPSADRSQSKLYFARFSTKVG--FCRVR----VPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       363 ~-~~-Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G--~~~v~----iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      . +. ||.|+|  +++.   ..+..|+++.+.+..+  |....    +-+-..||..+.+..++..||+  ++||+|..
T Consensus       238 ~Kg~~geIYNI--gtd~---e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik--~LGw~~~~  309 (331)
T KOG0747|consen  238 EKGELGEIYNI--GTDD---EMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIK--KLGWRPTT  309 (331)
T ss_pred             hcCCccceeec--cCcc---hhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHH--hcCCcccC
Confidence            3 33 777755  6654   5677888888888766  32211    2223446677888999999999  47888764

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.6e-15  Score=142.21  Aligned_cols=201  Identities=13%  Similarity=0.115  Sum_probs=124.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +.++|++|||||+||||++++++|+++|++|++++++...   ....   ..+..+.++.+|++|.+++.++++.     
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3568899999999999999999999999999988775432   1111   2245688899999999999988864     


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|+||||||....         .+++.+++|+.|++++++++.+..      .....+       .++..++...+..
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~~-------~iv~~~s~~~~~~  152 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARAL------PADARG-------LVVNMIDQRVWNL  152 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH------HhcCCc-------eEEEECchhhcCC
Confidence              5999999997432         146689999999999999985432      211111       1222222211111


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccc----e----e---ccccC-CCcccHHHHHHHHHHHhc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYV----E----L---SKKLS-LPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~----~----i---~~~~~-~p~g~v~D~~~gi~l~~~  363 (437)
                      .|  ....|+.+|.+.+.+......++... +......|+...    .    .   ..... .....++|++++++..+.
T Consensus       153 ~p--~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~  229 (258)
T PRK09134        153 NP--DFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLD  229 (258)
T ss_pred             CC--CchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence            22  23468888887766655443333221 111222222100    0    0   00000 111358899998888874


Q ss_pred             c---CCcEEEEEcc
Q 013761          364 G---NGRSYVLILE  374 (437)
Q Consensus       364 ~---~Ge~y~l~l~  374 (437)
                      .   .|+.|.+..+
T Consensus       230 ~~~~~g~~~~i~gg  243 (258)
T PRK09134        230 APSVTGQMIAVDGG  243 (258)
T ss_pred             CCCcCCCEEEECCC
Confidence            2   4666666443

>PLN02253 xanthoxin dehydrogenase

Probab=99.65  E-value=1.3e-15  Score=148.87  Aligned_cols=104  Identities=22%  Similarity=0.235  Sum_probs=85.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.+.  +....+  ..++.++++|++|.++++++++       .
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999987542  222222  2368899999999999998887       4


Q ss_pred             ccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....           .++.++++|+.|++++++++.+
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  140 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAAR  140 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            6999999997532           1456899999999999998843

>PLN02996 fatty acyl-CoA reductase

Probab=99.65  E-value=4.2e-15  Score=157.53  Aligned_cols=233  Identities=15%  Similarity=0.079  Sum_probs=150.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCcH----HHHh-h-------------C--------CCCeEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG---YSVKALVRKADQ----EVVD-M-------------L--------PRSVEI  209 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G---~~V~~~~R~~~~----~~~~-~-------------~--------~~~v~~  209 (437)
                      +.+|+|||||||||||++|++.|+..+   .+|+++.|....    +.+. .             .        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            678999999999999999999999865   368999996541    1110 0             0        146899


Q ss_pred             EEecCC-------CHHHHHHHHhcccEEEEeccCCCC--chhhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecC-Ccchh
Q 013761          210 VLGDVG-------DPCTLKAAVENCNKIIYCATARST--ITGDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAG-KSSKS  277 (437)
Q Consensus       210 v~~Dlt-------d~~~v~~a~~~~D~VIh~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~-~~g~s  277 (437)
                      +.+|++       |.+.++++++++|+|||+|+....  .....+++|+.|+.++++++++. +++ +.+.++. .+|..
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~  168 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK  168 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence            999998       556678888999999999997653  35678999999999999999886 554 4444432 22211


Q ss_pred             hhh-hhhhcc----------------------------CCCCcc-e--------eec---cCcccchhhhhhhhcccchh
Q 013761          278 KLL-LAKFKS----------------------------ADSLNG-W--------EVR---QGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       278 k~~-~~k~v~----------------------------~ssl~~-~--------i~r---P~~~~~~y~~sk~a~~~~~~  316 (437)
                      ... .|+...                            +.+.+. .        .+.   +..+.++|+.+|..+|....
T Consensus       169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~  248 (491)
T PLN02996        169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG  248 (491)
T ss_pred             CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence            100 001000                            000000 0        001   23345789999999998886


Q ss_pred             hhhcccccceeeeeeeccCccce---------------e----cc-cc---------CCCcccHHHHHHHHHHHhcc---
Q 013761          317 FELSETGDAVFSGYVFTRGGYVE---------------L----SK-KL---------SLPLGCTLDRYEGLVLSVGG---  364 (437)
Q Consensus       317 ~~~~~~~~~v~~g~~~~~~G~~~---------------i----~~-~~---------~~p~g~v~D~~~gi~l~~~~---  364 (437)
                      .+.  .+.++...|+++.+|...               +    .. .+         .....+|+|+++++++++..   
T Consensus       249 ~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~  326 (491)
T PLN02996        249 NFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAG  326 (491)
T ss_pred             Hhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhc
Confidence            543  267777777777665210               0    00 00         01123899999999998742   


Q ss_pred             ---CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC
Q 013761          365 ---NGRSYVLILEAGPSADRSQSKLYFARFSTKVG  396 (437)
Q Consensus       365 ---~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G  396 (437)
                         .++.|++  +++. ...+++.++++.+.+..+
T Consensus       327 ~~~~~~vYNi--~s~~-~~~~s~~ei~~~~~~~~~  358 (491)
T PLN02996        327 GQGSEIIYHV--GSSL-KNPVKFSNLHDFAYRYFS  358 (491)
T ss_pred             cCCCCcEEEe--cCCC-CCcccHHHHHHHHHHHhh
Confidence               2455655  4431 124689999999988766

>PRK09135 pteridine reductase; Provisional

Probab=99.65  E-value=5e-15  Score=141.18  Aligned_cols=198  Identities=19%  Similarity=0.206  Sum_probs=124.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---H---HhhC-CCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---V---VDML-PRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~---~~~~-~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ++++++|||||+||||++++++|+++|++|++++|+....   .   +... ...+.++.+|++|.+++.++++.     
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999875421   1   1111 24588899999999999988875     


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|+||||||....         .++.++++|+.|+.++++++.+.      +.... +       .++..+++.  ..
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~------~~~~~-~-------~~~~~~~~~--~~  147 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ------LRKQR-G-------AIVNITDIH--AE  147 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH------HhhCC-e-------EEEEEeChh--hc
Confidence              5999999996432         14568999999999999999542      11100 0       111111111  11


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc--cc---eeeeeeeccCccc---ee------ccccCCCcccHHHHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG--DA---VFSGYVFTRGGYV---EL------SKKLSLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~--~~---v~~g~~~~~~G~~---~i------~~~~~~p~g~v~D~~~gi~l~  361 (437)
                      .|..+...|+.+|...+........++.  ..   +.++.++++....   ..      ........+.++|+++++...
T Consensus       148 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~  227 (249)
T PRK09135        148 RPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFL  227 (249)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence            2333456788888887766654444332  22   2233333332210   00      011111234689999999555


Q ss_pred             h-c---cCCcEEEEE
Q 013761          362 V-G---GNGRSYVLI  372 (437)
Q Consensus       362 ~-~---~~Ge~y~l~  372 (437)
                      + .   ..|+.|++.
T Consensus       228 ~~~~~~~~g~~~~i~  242 (249)
T PRK09135        228 LADASFITGQILAVD  242 (249)
T ss_pred             cCccccccCcEEEEC
Confidence            4 2   247777663

>PRK06398 aldose dehydrogenase; Validated

Probab=99.64  E-value=1.5e-15  Score=147.30  Aligned_cols=144  Identities=15%  Similarity=0.142  Sum_probs=103.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      +|++|++|||||+|+||++++++|+++|++|++++|+....      ..+.++.+|++|+++++++++.       +|+|
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47789999999999999999999999999999999976431      2578899999999999888863       6999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      |||||....         .+++.+++|+.|++++++++.+      .|.....+       +++..++.....  |....
T Consensus        77 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~g-------~iv~isS~~~~~--~~~~~  141 (258)
T PRK06398         77 VNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIP------YMLKQDKG-------VIINIASVQSFA--VTRNA  141 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHHcCCe-------EEEEeCcchhcc--CCCCC
Confidence            999997431         1566899999999999999843      33211111       244444433222  22234


Q ss_pred             chhhhhhhhcccchhhhhccc
Q 013761          302 QDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ..|+.+|.+.+.+......++
T Consensus       142 ~~Y~~sKaal~~~~~~la~e~  162 (258)
T PRK06398        142 AAYVTSKHAVLGLTRSIAVDY  162 (258)
T ss_pred             chhhhhHHHHHHHHHHHHHHh
Confidence            567777777666554444333

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.64  E-value=5.7e-15  Score=142.29  Aligned_cols=106  Identities=20%  Similarity=0.204  Sum_probs=86.6

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      .++.+|++|||||+|+||++++++|+++|++|++++|+.+.  +..+.   .+.++.++.+|++|.++++++++.     
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35788999999999999999999999999999999998652  11122   234588899999999999998875     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                        +|+||||||.....         +++.+++|+.+++++++++.+.
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARH  132 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence              59999999975321         4568899999999999998653

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.64  E-value=5e-15  Score=142.58  Aligned_cols=102  Identities=21%  Similarity=0.200  Sum_probs=82.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+.  +..   ...+..+.++++|++|.++++++++.      
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999998752  112   22344678899999999999888875      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                       +|+||||||.....         +++.+++|+.+++.+++++
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  126 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAA  126 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHH
Confidence             69999999975321         4567889999977766655

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.63  E-value=5.3e-15  Score=148.46  Aligned_cols=223  Identities=19%  Similarity=0.169  Sum_probs=134.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH----HHh----h--C-----C-CCeEEEEecCCCH------H
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE----VVD----M--L-----P-RSVEIVLGDVGDP------C  218 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~----~~~----~--~-----~-~~v~~v~~Dltd~------~  218 (437)
                      +|||||||||||++|+++|+++|  ++|++++|+.+..    .+.    .  +     . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7899999986521    110    0  0     1 4789999999854      5


Q ss_pred             HHHHHHhcccEEEEeccCCCC--chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cchhhhhhhhhccCCCCccee
Q 013761          219 TLKAAVENCNKIIYCATARST--ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       219 ~v~~a~~~~D~VIh~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g~sk~~~~k~v~~ssl~~~i  294 (437)
                      ....+.+++|+|||||+....  ....++++|+.|+.++++++.+.+++ +.++++.. ++....   ..+.+....  .
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~---~~~~~~~~~--~  155 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDL---STVTEDDAI--V  155 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCC---CCccccccc--c
Confidence            677778889999999997542  35667889999999999999988876 55554321 110000   000000000  0


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcc-----ce-------e------------ccccCCCccc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGY-----VE-------L------------SKKLSLPLGC  350 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~-----~~-------i------------~~~~~~p~g~  350 (437)
                      ..+..+...|+.+|+..+......... +......++...+|.     ..       .            .........+
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  234 (367)
T TIGR01746       156 TPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTP  234 (367)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCccc
Confidence            001112345666666665544332221 333333333222221     00       0            0000011237


Q ss_pred             HHHHHHHHHHHhcc-C----CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          351 TLDRYEGLVLSVGG-N----GRSYVLILEAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       351 v~D~~~gi~l~~~~-~----Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                      ++|++++++..+.. .    |+.|++  .++.   ..++.|+++.+.+ .|.
T Consensus       235 vddva~ai~~~~~~~~~~~~~~~~~v--~~~~---~~s~~e~~~~i~~-~g~  280 (367)
T TIGR01746       235 VDYVARAIVALSSQPAASAGGPVFHV--VNPE---PVSLDEFLEWLER-AGY  280 (367)
T ss_pred             HHHHHHHHHHHHhCCCcccCCceEEe--cCCC---CCCHHHHHHHHHH-cCC
Confidence            99999999987732 1    566766  3332   4678999999988 674

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK05717 oxidoreductase; Validated

Probab=99.63  E-value=2.7e-15  Score=144.70  Aligned_cols=150  Identities=19%  Similarity=0.160  Sum_probs=105.3

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.+++.++++.       +
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999999987642  22233455688999999999998776654       5


Q ss_pred             cEEEEeccCCCCc-----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          228 NKIIYCATARSTI-----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       228 D~VIh~Ag~~~~~-----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      |+||||||.....           +++.+++|+.+++++++++.+      .|.... +       +++..++.......
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~-g-------~ii~~sS~~~~~~~  151 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAP------YLRAHN-G-------AIVNLASTRARQSE  151 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHHcC-c-------EEEEEcchhhcCCC
Confidence            9999999975321           456899999999999999943      221110 0       23333333222112


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      |  ....|+.+|.+.+.+......++
T Consensus       152 ~--~~~~Y~~sKaa~~~~~~~la~~~  175 (255)
T PRK05717        152 P--DTEAYAASKGGLLALTHALAISL  175 (255)
T ss_pred             C--CCcchHHHHHHHHHHHHHHHHHh
Confidence            2  24567888877666655444443

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.6e-15  Score=146.09  Aligned_cols=143  Identities=12%  Similarity=0.088  Sum_probs=102.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC----CCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML----PRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~----~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+.  +..+.+    +.++.++.+|++|+++++++++.      
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            678999999999999999999999999999999998652  112221    34688999999999999988873      


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|++|||||....         .|++.+++|+.+++.+++++      ++.|.....+       +++..++.......|
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------l~~m~~~~~g-------~Ii~isS~~~~~~~~  152 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRAL------VPAMERKGFG-------RIIYSTSVAIKEPIP  152 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------EEEEEcCccccCCCC
Confidence            6999999997432         26678999999999999998      4444322222       355555443322222


Q ss_pred             Ccccchhhhhhhhcccchh
Q 013761          298 GTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~  316 (437)
                        ....|..+|.+...+..
T Consensus       153 --~~~~y~asKaal~~l~~  169 (263)
T PRK08339        153 --NIALSNVVRISMAGLVR  169 (263)
T ss_pred             --cchhhHHHHHHHHHHHH
Confidence              23456666665554443

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5.9e-15  Score=148.92  Aligned_cols=198  Identities=18%  Similarity=0.174  Sum_probs=126.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.+|++|||||+||||+++++.|+++|++|++++|+.+.  +.   ....+..+.++.+|++|.++++++++       .
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999998652  11   22234568889999999999998875       3


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+||||||+....         +++++++|+.|+.++++++      ++.|.....+       .++..++.......|
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~------lp~~~~~~~g-------~iV~isS~~~~~~~p  151 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAA------LPIFKKQGHG-------IFINMISLGGFAAQP  151 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHH------HHHHHHcCCC-------EEEEEcChhhcCCCC
Confidence            59999999974321         4568999999999999998      4444332211       344444443332223


Q ss_pred             Ccccchhhhhhhhcccchhhhhccc----cc---ceeeeeeeccCcc--ce-ecccc--CCCcccHHHHHHHHHHHhccC
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSET----GD---AVFSGYVFTRGGY--VE-LSKKL--SLPLGCTLDRYEGLVLSVGGN  365 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~----~~---~v~~g~~~~~~G~--~~-i~~~~--~~p~g~v~D~~~gi~l~~~~~  365 (437)
                        ....|..+|.+...+......+.    +.   .+.++.+.++.-.  .. .....  ..+....+|++++++..+..+
T Consensus       152 --~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        152 --YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence              35668888876554443222222    21   1223333333210  00 00011  122335788999998888654


Q ss_pred             CcEEEE
Q 013761          366 GRSYVL  371 (437)
Q Consensus       366 Ge~y~l  371 (437)
                      ...+.+
T Consensus       230 ~~~~~~  235 (330)
T PRK06139        230 RATTTV  235 (330)
T ss_pred             CCEEEc
Confidence            443433

>PRK06182 short chain dehydrogenase; Validated

Probab=99.63  E-value=5.8e-15  Score=143.93  Aligned_cols=99  Identities=30%  Similarity=0.402  Sum_probs=81.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VIh  232 (437)
                      .+|+++||||+|+||++++++|+++|++|++++|+.+.. .......+.++.+|++|.++++++++       ++|+|||
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-EDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            468999999999999999999999999999999986531 11112358899999999999998887       5699999


Q ss_pred             eccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          233 CATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       233 ~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      |||....         .++..+++|+.|+.++++++
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  116 (273)
T PRK06182         81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLV  116 (273)
T ss_pred             CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHH
Confidence            9997542         14668999999988777765

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.63  E-value=8.6e-15  Score=142.59  Aligned_cols=102  Identities=22%  Similarity=0.147  Sum_probs=83.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |+++++|||||+|+||++++++|+++|++|++++|+.+.  +....+. .+.++.+|++|+++++++++.       +|+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            667899999999999999999999999999999997653  1122222 578899999999998877764       499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||+....         +.+++++|+.|+.++++++.+
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  122 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAP  122 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999975321         456899999999999998843

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.5e-14  Score=141.05  Aligned_cols=104  Identities=25%  Similarity=0.283  Sum_probs=83.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHh------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      |.+|++|||||+|+||+++++.|+++|++|++++|+.+.  .....+     ...+.++.+|++|++++.++++      
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567999999999999999999999999999999997652  111111     2467889999999999988887      


Q ss_pred             -cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 -NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       .+|+||||||....          .+...+++|+.++.++++++.+.
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARE  132 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence             46999999996421          14568899999999999988543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.63  E-value=3.8e-15  Score=143.94  Aligned_cols=148  Identities=19%  Similarity=0.123  Sum_probs=103.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh-----CCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM-----LPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~-----~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      ++.+|+++||||+|+||++++++|+++|++|++++|+.+.  +..+.     ....+.++.+|++|+++++++++     
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999997652  11222     23467889999999999988887     


Q ss_pred             --cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          226 --NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                        .+|+||||||....         .++..+++|+.+++++++++.      +.|.....+       +++..++.....
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~------~~~~~~~~g-------~iv~isS~~~~~  150 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVL------PGMVERGRG-------SIVNIASTHAFK  150 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHH------HHHHhhCCe-------EEEEECChhhcc
Confidence              36999999996421         256789999999999999983      333221111       244434332222


Q ss_pred             eccCcccchhhhhhhhcccchhhhhc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                      ..|+  ...|..+|.+...+......
T Consensus       151 ~~~~--~~~Y~~sKaa~~~~~~~la~  174 (260)
T PRK07063        151 IIPG--CFPYPVAKHGLLGLTRALGI  174 (260)
T ss_pred             CCCC--chHHHHHHHHHHHHHHHHHH
Confidence            2222  34577777766555544333

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.3e-14  Score=146.44  Aligned_cols=104  Identities=23%  Similarity=0.256  Sum_probs=84.8

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      +.+.+++|+||||+||||++++++|+++|++|++++|+.+.  +.   +...+.++.++.+|++|.++++++++      
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            34678999999999999999999999999999999998652  11   12234578899999999999998876      


Q ss_pred             -cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          226 -NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                       .+|++|||||.....         +++.+++|+.|+.++++++.
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l  128 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL  128 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence             369999999974321         45689999999999888873

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.62  E-value=1.2e-14  Score=139.08  Aligned_cols=104  Identities=19%  Similarity=0.213  Sum_probs=83.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      .+.+++++||||+|+||++++++|+++|++|+++.++...   +...   ..+.++.++.+|++|.+++.++++.     
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999887654332   1111   2234688999999999999988876     


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|+||||||....         .+++.+++|+.+++++++++.+
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLP  128 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence              5999999997442         1456899999999999999854

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.62  E-value=2.3e-15  Score=145.38  Aligned_cols=104  Identities=14%  Similarity=0.211  Sum_probs=86.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      ++.+|++|||||++|||++++++|+++|++|++++|+..+.   ..+....++.++.+|++|.++++++++.       +
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            36789999999999999999999999999999998865422   2233455788999999999999988874       5


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||....         .|++.+++|+.+++++++++.+
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  127 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAK  127 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHH
Confidence            999999997532         2567899999999999999843

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.62  E-value=1.6e-14  Score=139.33  Aligned_cols=102  Identities=19%  Similarity=0.106  Sum_probs=81.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+... +...   .....+.++.+|++|.+++.++++.       +
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999997532 1112   2234678899999999998887764       5


Q ss_pred             cEEEEeccCCC--C--------chhhHHHHHHHHHHHHHHHHH
Q 013761          228 NKIIYCATARS--T--------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       228 D~VIh~Ag~~~--~--------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |+||||||...  .        .+.+.+++|+.+++++++++.
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  128 (260)
T PRK12823         86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVL  128 (260)
T ss_pred             eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHH
Confidence            99999998531  1        145678999999998888774

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.1e-15  Score=140.71  Aligned_cols=105  Identities=18%  Similarity=0.198  Sum_probs=85.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---H---HhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---V---VDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~---~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+..   .   ++..+..+.++.+|++|+++++++++      
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999975421   1   12223467889999999999988876      


Q ss_pred             -cccEEEEeccCCCC---chhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 -NCNKIIYCATARST---ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       .+|+||||||....   .+...+++|+.|+.++++++.+.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  123 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPL  123 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhh
Confidence             36999999986432   24567899999999999999654

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.62  E-value=4.4e-15  Score=144.05  Aligned_cols=104  Identities=20%  Similarity=0.236  Sum_probs=86.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++.       +|
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            3678999999999999999999999999999999998652  22334455788999999999999888874       49


Q ss_pred             EEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||....        .+++.+++|+.+++++++++.+
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (261)
T PRK08265         83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHP  123 (261)
T ss_pred             EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            99999997421        2567899999999999998844

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.62  E-value=1.5e-14  Score=141.90  Aligned_cols=200  Identities=12%  Similarity=0.058  Sum_probs=134.0

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHH------hc-ccEEEEecc
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAV------EN-CNKIIYCAT  235 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~------~~-~D~VIh~Ag  235 (437)
                      +||||||||+||++++++|+++|++|++++|+.+...    ...+..+.+|+.|++++.+++      ++ +|.|||+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999999999999999876321    235677889999999999999      57 999999987


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC---CcchhhhhhhhhccCC-CCcceeeccCcccchhhhhhhh
Q 013761          236 ARSTITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG---KSSKSKLLLAKFKSAD-SLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       236 ~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~---~~g~sk~~~~k~v~~s-sl~~~i~rP~~~~~~y~~sk~a  310 (437)
                      ....   .     .....+++++|+++|++ +.+++..   ..+..+...+.++... +++++++||+.|+.++.. .  
T Consensus        77 ~~~~---~-----~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~-~--  145 (285)
T TIGR03649        77 PIPD---L-----APPMIKFIDFARSKGVRRFVLLSASIIEKGGPAMGQVHAHLDSLGGVEYTVLRPTWFMENFSE-E--  145 (285)
T ss_pred             CCCC---h-----hHHHHHHHHHHHHcCCCEEEEeeccccCCCCchHHHHHHHHHhccCCCEEEEeccHHhhhhcc-c--
Confidence            5321   1     23446889999999986 5555431   1122333344556554 899999999976644311 0  


Q ss_pred             cccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHH
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLY  387 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~  387 (437)
                         .......+.      +.+..+.|  ..    ..+..+++|+++++..++..   .++.|++...     +.+|++|+
T Consensus       146 ---~~~~~~~~~------~~~~~~~g--~~----~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~-----~~~s~~ei  205 (285)
T TIGR03649       146 ---FHVEAIRKE------NKIYSATG--DG----KIPFVSADDIARVAYRALTDKVAPNTDYVVLGP-----ELLTYDDV  205 (285)
T ss_pred             ---ccccccccC------CeEEecCC--CC----ccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCC-----ccCCHHHH
Confidence               000000010      11111111  10    11233689999999888743   3567776432     25789999


Q ss_pred             HHHHHhhhCC
Q 013761          388 FARFSTKVGF  397 (437)
Q Consensus       388 ~~~i~~~~G~  397 (437)
                      ++.+.+.+|.
T Consensus       206 a~~l~~~~g~  215 (285)
T TIGR03649       206 AEILSRVLGR  215 (285)
T ss_pred             HHHHHHHhCC
Confidence            9999999994

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.6e-14  Score=138.30  Aligned_cols=104  Identities=22%  Similarity=0.231  Sum_probs=84.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+.  ...+.   ....+.++.+|++|.++++++++.       
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            577899999999999999999999999999999998642  11111   233577899999999998887763       


Q ss_pred             ccEEEEeccCCCC------------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 CNKIIYCATARST------------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 ~D~VIh~Ag~~~~------------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +|+||||||....            .+++.+++|+.++.++++++.+.
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKH  131 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            5999999997431            14567899999999999998543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.61  E-value=2.7e-14  Score=156.83  Aligned_cols=235  Identities=9%  Similarity=0.012  Sum_probs=145.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~  237 (437)
                      ..|+||||||+||||++|++.|.++|++|...                   .+|++|.+.+..++.  ++|+|||+|+..
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~  439 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------KGRLEDRSSLLADIRNVKPTHVFNAAGVT  439 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------ccccccHHHHHHHHHhhCCCEEEECCccc
Confidence            45789999999999999999999999987311                   247888888988887  569999999976


Q ss_pred             CC--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhh-hh-h-hhhccCCCCcceeeccCcccchhh
Q 013761          238 ST--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSK-LL-L-AKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       238 ~~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk-~~-~-~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      ..        .+...+++|+.|+.+++++|++.++++.+++++. ++... .. . ...+.++.      .|..+.+.|+
T Consensus       440 ~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~------~~~~~~~~Yg  513 (668)
T PLN02260        440 GRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEED------KPNFTGSFYS  513 (668)
T ss_pred             CCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCC------CCCCCCChhh
Confidence            32        2456899999999999999999999876665432 21000 00 0 00112221      1222347899


Q ss_pred             hhhhhcccchhhhhcccccceeeeeeeccCc---cce-e---ccccCCCc--ccHHHHHHHHHHHhc-cCCcEEEEEccC
Q 013761          306 AFKYDAGMDAKFELSETGDAVFSGYVFTRGG---YVE-L---SKKLSLPL--GCTLDRYEGLVLSVG-GNGRSYVLILEA  375 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G---~~~-i---~~~~~~p~--g~v~D~~~gi~l~~~-~~Ge~y~l~l~~  375 (437)
                      .+|+.++.....+...+...+.+.+....++   ++. +   ...+..|.  .+++|++.+++..+. ..++.|++  ++
T Consensus       514 ~sK~~~E~~~~~~~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~~~giyni--~~  591 (668)
T PLN02260        514 KTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNF--TN  591 (668)
T ss_pred             HHHHHHHHHHHhhhhheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhCCCceEEe--cC
Confidence            9999999887654332222222222222221   111 0   11111222  256678877777664 33566765  44


Q ss_pred             CCCCCCCcHHHHHHHHHhhh--CCceecccCCCc---ccC-CCCCCCCCHHHHhhc
Q 013761          376 GPSADRSQSKLYFARFSTKV--GFCRVRVPFSSF---RPV-KPDDPPMDPFLVHTM  425 (437)
Q Consensus       376 ~~~~~~~s~~e~~~~i~~~~--G~~~v~iP~~~~---r~~-~~~~~~ld~~ki~~~  425 (437)
                      ++   .+|..|+++.+.+..  |+....++...+   .+. .+.. .||..|++..
T Consensus       592 ~~---~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~~~k~~~~  643 (668)
T PLN02260        592 PG---VVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMDASKLKKE  643 (668)
T ss_pred             CC---cCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-cccHHHHHHh
Confidence            43   478999999999877  321111222221   111 2333 8999999875

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.61  E-value=6e-15  Score=142.28  Aligned_cols=103  Identities=21%  Similarity=0.248  Sum_probs=84.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+.+.   +..   .....++.++.+|++|+++++++++.     
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999997642   111   22244678899999999999988875     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                        +|+||||||.....         +++.+++|+.+++++++++.
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEA  129 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHH
Confidence              49999999975321         56689999999999999883

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.61  E-value=1.8e-14  Score=138.95  Aligned_cols=104  Identities=20%  Similarity=0.199  Sum_probs=86.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      ++++++|||||+|+||+++++.|+++|++|++++|+.+.  ...+.+...+.++.+|++|.++++++++.       +|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            667899999999999999999999999999999998763  22333445688899999999999988874       599


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ||||||....         .++..+++|+.+++++++++.+.
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARH  125 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            9999997532         15568999999999999998543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.61  E-value=1.8e-14  Score=138.28  Aligned_cols=103  Identities=19%  Similarity=0.175  Sum_probs=83.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.++++|||||+|+||++++++|+++|++|++++|+.+.  ....   ....++.++.+|++|.++++++++.       
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999998652  1111   2245788999999999999888874       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||.....         ++..+++|+.+++++++++.+
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALP  125 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence            69999999964321         345788999998888877744

>PRK08589 short chain dehydrogenase; Validated

Probab=99.61  E-value=6.4e-15  Score=143.90  Aligned_cols=149  Identities=19%  Similarity=0.156  Sum_probs=103.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      .+.+|++|||||+||||++++++|+++|++|++++|+... +...   ....++.++.+|++|.++++++++.       
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999999999999999998321 1122   2234688999999999999888764       


Q ss_pred             ccEEEEeccCCCC--c--------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 CNKIIYCATARST--I--------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 ~D~VIh~Ag~~~~--~--------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      +|+||||||....  .        +++.+++|+.|++.+++++      ++.+.... +       +++..++.....  
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------~~~~~~~~-g-------~iv~isS~~~~~--  146 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKML------LPLMMEQG-G-------SIINTSSFSGQA--  146 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcC-C-------EEEEeCchhhcC--
Confidence            5999999997531  1        4568999999999999998      43332211 1       244434332221  


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      |......|..+|.+...+......++
T Consensus       147 ~~~~~~~Y~asKaal~~l~~~la~e~  172 (272)
T PRK08589        147 ADLYRSGYNAAKGAVINFTKSIAIEY  172 (272)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            22224567777777666554444333

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.61  E-value=9.7e-15  Score=155.01  Aligned_cols=142  Identities=25%  Similarity=0.299  Sum_probs=110.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhC------------CCCeEEEEecCCCHHHHHHHH
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDML------------PRSVEIVLGDVGDPCTLKAAV  224 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~------------~~~v~~v~~Dltd~~~v~~a~  224 (437)
                      .++++||||||+||||++++++|+++|++|++++|+.+..  ....+            ..++.++.+|++|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            5678999999999999999999999999999999986631  11111            125789999999999999999


Q ss_pred             hcccEEEEeccCCCC---chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCCc----------------chhhhhhhhh
Q 013761          225 ENCNKIIYCATARST---ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGKS----------------SKSKLLLAKF  284 (437)
Q Consensus       225 ~~~D~VIh~Ag~~~~---~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~~----------------g~sk~~~~k~  284 (437)
                      .++|+||||||....   .+...+++|+.|+.++++++++.+++ +.++++...                ...+..++..
T Consensus       158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~  237 (576)
T PLN03209        158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEA  237 (576)
T ss_pred             cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHH
Confidence            999999999997542   24567899999999999999998875 554443210                1123444556


Q ss_pred             ccCCCCcceeeccCcc
Q 013761          285 KSADSLNGWEVRQGTY  300 (437)
Q Consensus       285 v~~ssl~~~i~rP~~~  300 (437)
                      +..+++.+++++|+++
T Consensus       238 L~~sGIrvTIVRPG~L  253 (576)
T PLN03209        238 LIASGLPYTIVRPGGM  253 (576)
T ss_pred             HHHcCCCEEEEECCee
Confidence            6678899999999854

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.61  E-value=5.7e-15  Score=142.22  Aligned_cols=152  Identities=17%  Similarity=0.139  Sum_probs=104.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+.+.  ...+   ....++.++.+|++|+++++++++       
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999997652  1111   223467889999999999988876       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      .+|+||||||....         .+++.+++|+.+++++++++.+      .|.....+      ..++..++.......
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~------~~~~~~~~------g~iv~~sS~~~~~~~  153 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK------AMVKQGQG------GVIINTASMSGHIIN  153 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH------HHHhcCCC------cEEEEECcHHhcCCC
Confidence            46999999997532         1566889999999999999843      33211100      023333333222111


Q ss_pred             cCcccchhhhhhhhcccchhhhhcc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +......|+.+|.+.+.+......+
T Consensus       154 ~~~~~~~Y~asKaal~~~~~~la~e  178 (253)
T PRK05867        154 VPQQVSHYCASKAAVIHLTKAMAVE  178 (253)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHH
Confidence            1112356888888777666544443

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.61  E-value=7.6e-15  Score=141.32  Aligned_cols=150  Identities=16%  Similarity=0.086  Sum_probs=103.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+.  +..   .....++.++.+|++|.++++++++       .
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            568899999999999999999999999999999998652  111   2224468889999999999988887       3


Q ss_pred             ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 ~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      +|+||||||....          .+++.+++|+.+++++++++.+      .+.....+       +++..++..... .
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~------~l~~~~~~-------~iv~~sS~~~~~-~  149 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIP------AMLARGGG-------SLIFTSTFVGHT-A  149 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH------HHHhcCCc-------eEEEEechHhhc-c
Confidence            5999999997431          1466899999999999998733      33221111       233333322111 1


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      +......|..+|.+...+......+.
T Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~  175 (254)
T PRK07478        150 GFPGMAAYAASKAGLIGLTQVLAAEY  175 (254)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHH
Confidence            11124567888877666554444443

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.60  E-value=4.1e-15  Score=144.74  Aligned_cols=141  Identities=19%  Similarity=0.244  Sum_probs=110.7

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHHHhhCC--CCeEEEEecCCCHHHHHHHHhc------
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP--RSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      .+.+|++||||||++|||++++.+|+++|+++++.|.+.+  .+..++..  +.+..+.||++|.+++.+..+.      
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3478999999999999999999999999999999999876  22222222  3789999999999998877764      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                       +|+||||||+....         .++.+++|+.|.+..++++      +|.|-....|       .++..+|+.+....
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaF------LP~M~~~~~G-------HIV~IaS~aG~~g~  180 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAF------LPKMLENNNG-------HIVTIASVAGLFGP  180 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHH------hHHHHhcCCc-------eEEEehhhhcccCC
Confidence             49999999986432         4568999999999999999      7777655444       46666666665544


Q ss_pred             cCcccchhhhhhhhcc
Q 013761          297 QGTYFQDVVAFKYDAG  312 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~  312 (437)
                      |+  ..+|.++|+++.
T Consensus       181 ~g--l~~YcaSK~a~v  194 (300)
T KOG1201|consen  181 AG--LADYCASKFAAV  194 (300)
T ss_pred             cc--chhhhhhHHHHH
Confidence            44  667888887654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.60  E-value=2.2e-14  Score=136.86  Aligned_cols=103  Identities=24%  Similarity=0.246  Sum_probs=84.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      ++++|+||||||+|+||+++++.|+++|++|++++|+.+.  ..   +......+.++.+|++|.++++++++       
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999998542  11   12223458899999999999999886       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      .+|+|||+||....         .+...+++|+.++.++++++.
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  126 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAAL  126 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            46999999987543         145689999999999999884

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.60  E-value=7.6e-15  Score=146.75  Aligned_cols=106  Identities=19%  Similarity=0.221  Sum_probs=87.2

Q ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhc-
Q 013761          155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVEN-  226 (437)
Q Consensus       155 ~~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~-  226 (437)
                      .++++++|+++||||++|||++++++|+++|++|++++|+.+.  +..+++     ...+.++.+|++|.++++++++. 
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            3567889999999999999999999999999999999998652  122221     23688999999999999988865 


Q ss_pred             ------ccEEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHH
Q 013761          227 ------CNKIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ------~D~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                            +|+||||||+...        .++..+.+|+.|++.+++.+.
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~ll  135 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLL  135 (313)
T ss_pred             HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHH
Confidence                  5999999997532        246689999999999999884

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.60  E-value=7.8e-14  Score=134.74  Aligned_cols=208  Identities=23%  Similarity=0.238  Sum_probs=131.8

Q ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC--CCCeEEEEecCCC-HHHHHHHH-hcccEEE
Q 013761          156 IPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML--PRSVEIVLGDVGD-PCTLKAAV-ENCNKII  231 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~v~~v~~Dltd-~~~v~~a~-~~~D~VI  231 (437)
                      ..+..+|+||||||+|+||++++++|+++|++|+++.|+.+... ...  ...+.++.+|++| .+.+.+.+ .++|+||
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK-TSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH-HhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            34466789999999999999999999999999999999865311 111  2368899999998 46777777 6899999


Q ss_pred             EeccCCCC-chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cc---------------------hhhhhhhhhccC
Q 013761          232 YCATARST-ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SS---------------------KSKLLLAKFKSA  287 (437)
Q Consensus       232 h~Ag~~~~-~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g---------------------~sk~~~~k~v~~  287 (437)
                      |++|.... .....+++|+.++.++++++++.+++ +.++++.. |+                     ..|...+.++..
T Consensus        91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~  170 (251)
T PLN00141         91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRK  170 (251)
T ss_pred             ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHh
Confidence            99987432 22234678999999999999988875 55544321 11                     012222333445


Q ss_pred             CCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---
Q 013761          288 DSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---  364 (437)
Q Consensus       288 ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---  364 (437)
                      .++.+++++|+++.+.....                ..     ...+...      +.....+.+|+++.++..+..   
T Consensus       171 ~gi~~~iirpg~~~~~~~~~----------------~~-----~~~~~~~------~~~~~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        171 SGINYTIVRPGGLTNDPPTG----------------NI-----VMEPEDT------LYEGSISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             cCCcEEEEECCCccCCCCCc----------------eE-----EECCCCc------cccCcccHHHHHHHHHHHhcChhh
Confidence            56667777776443221000                00     0000000      000012578999999888742   


Q ss_pred             CCcEEEEEccCCCCCCCCcHHHHHHHHHh
Q 013761          365 NGRSYVLILEAGPSADRSQSKLYFARFST  393 (437)
Q Consensus       365 ~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~  393 (437)
                      .+..+.+.+..+  ....++.++++.+++
T Consensus       224 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~  250 (251)
T PLN00141        224 SYKVVEIVARAD--APKRSYKDLFASIKQ  250 (251)
T ss_pred             cCcEEEEecCCC--CCchhHHHHHHHhhc
Confidence            345565544332  124578888888764

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.60  E-value=3.1e-14  Score=139.24  Aligned_cols=103  Identities=20%  Similarity=0.223  Sum_probs=83.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+.  +.   ......++.++.+|++|.+++.++++.       
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999999987542  11   112234688899999999999988874       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||.....         +.+.+++|+.++.++++++.+
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~  131 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP  131 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            59999999975321         345689999999999998743

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.60  E-value=9.8e-15  Score=140.99  Aligned_cols=150  Identities=15%  Similarity=0.188  Sum_probs=105.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-H---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-V---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      ++.+|+||||||+|+||++++++|+++|++|++++|+...+ .   .......+.++.+|++|.++++++++       .
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            36789999999999999999999999999999999984321 1   22234568899999999999998887       3


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|++|||||....         .+++.+++|+.+++++++++.      +.|.....+       +++..++....  .|
T Consensus        92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~------~~~~~~~~g-------~iv~isS~~~~--~~  156 (258)
T PRK06935         92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVA------KVMAKQGSG-------KIINIASMLSF--QG  156 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHH------HHHHhcCCe-------EEEEECCHHhc--cC
Confidence            5999999997431         155689999999999999884      333221111       23333333221  22


Q ss_pred             Ccccchhhhhhhhcccchhhhhccc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ......|+.+|.+.+.+......+.
T Consensus       157 ~~~~~~Y~asK~a~~~~~~~la~e~  181 (258)
T PRK06935        157 GKFVPAYTASKHGVAGLTKAFANEL  181 (258)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHh
Confidence            2234567888877766655444444

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.60  E-value=9.5e-15  Score=140.62  Aligned_cols=147  Identities=19%  Similarity=0.163  Sum_probs=104.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc-------cEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC-------NKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~-------D~VI  231 (437)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+.   ......+.++++|++|.++++++++.+       |+||
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            678999999999999999999999999999999997643   122446889999999999999888754       9999


Q ss_pred             EeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          232 YCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       232 h~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ||||....         .+++.+++|+.+++++++++.+      .|......      .+++..++.....  |.....
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~~------g~ii~isS~~~~~--~~~~~~  146 (252)
T PRK07856         81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANA------VMQQQPGG------GSIVNIGSVSGRR--PSPGTA  146 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHhcCCC------cEEEEEcccccCC--CCCCCc
Confidence            99996432         1457899999999999998843      22211000      1234334333222  222245


Q ss_pred             hhhhhhhhcccchhhhhccc
Q 013761          303 DVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|..+|...+.+......++
T Consensus       147 ~Y~~sK~a~~~l~~~la~e~  166 (252)
T PRK07856        147 AYGAAKAGLLNLTRSLAVEW  166 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHh
Confidence            67777777666654444443

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.59  E-value=4.2e-14  Score=136.67  Aligned_cols=140  Identities=23%  Similarity=0.281  Sum_probs=98.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      +|+|+||||+|+||+++++.|+++|++|++++|+.+.  +..+.+.  .++.++.+|++|++++.++++.       +|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4799999999999999999999999999999998652  1222222  1688999999999999888765       599


Q ss_pred             EEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ||||||....          .++..+++|+.|+.++++++      ++.|.....+       .++..++.......|  
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~------l~~~~~~~~~-------~iv~isS~~~~~~~~--  146 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPF------IAPMRAARRG-------TLVGIASVAGVRGLP--  146 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHH------HHHHHhcCCC-------EEEEEechhhcCCCC--
Confidence            9999997431          14568999999999999877      3333221111       233333332222222  


Q ss_pred             ccchhhhhhhhcccch
Q 013761          300 YFQDVVAFKYDAGMDA  315 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~  315 (437)
                      ....|+.+|.+.+...
T Consensus       147 ~~~~Y~asK~a~~~~~  162 (257)
T PRK07024        147 GAGAYSASKAAAIKYL  162 (257)
T ss_pred             CCcchHHHHHHHHHHH
Confidence            2455778887766554

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.6e-14  Score=141.34  Aligned_cols=150  Identities=15%  Similarity=0.168  Sum_probs=106.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---------HH---HhhCCCCeEEEEecCCCHHHHHHHHh-
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---------EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---------~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-  225 (437)
                      +.+|+++||||+||||+++++.|+++|++|++++|+.+.         +.   ....+.++.++.+|++|++++.++++ 
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            567899999999999999999999999999999997541         01   11224568889999999999988877 


Q ss_pred             ------cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          226 ------NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       226 ------~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                            .+|+||||||.....         +++.+++|+.|+.++++++..      .|.....+       .++..++.
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~------~~~~~~~g-------~iv~iss~  150 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP------HLKKSENP-------HILTLSPP  150 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH------HHHhcCCC-------EEEEECCc
Confidence                  469999999974321         466899999999999999943      33221111       23332322


Q ss_pred             cceeeccC--cccchhhhhhhhcccchhhhhcccc
Q 013761          291 NGWEVRQG--TYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       291 ~~~i~rP~--~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      ...  .+.  .....|+.+|.+.+.+......++.
T Consensus       151 ~~~--~~~~~~~~~~Y~~sK~a~~~~~~~la~el~  183 (273)
T PRK08278        151 LNL--DPKWFAPHTAYTMAKYGMSLCTLGLAEEFR  183 (273)
T ss_pred             hhc--cccccCCcchhHHHHHHHHHHHHHHHHHhh
Confidence            211  221  2356789999888877765555443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=6e-14  Score=133.20  Aligned_cols=102  Identities=25%  Similarity=0.364  Sum_probs=82.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---H---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---V---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +++|+||||||+|+||++|++.|+++|++|+++.|+....   .   ......++.++.+|++|++++.+++++      
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999998877765421   1   122345688999999999999988864      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                       +|+|||+||.....         +...+++|+.++.++++++.
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  127 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV  127 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence             59999999964322         35679999999999999883

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.59  E-value=1.4e-14  Score=144.94  Aligned_cols=103  Identities=20%  Similarity=0.292  Sum_probs=85.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC---CCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML---PRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.+|+++||||+||||+++++.|+++|++|++++|+.+.  +..+.+   ...+.++.+|++|.++++++++.       
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            568899999999999999999999999999999997652  222222   34688999999999999988865       


Q ss_pred             ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||+...          .++.++++|+.|++++++++.+
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  128 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE  128 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            7999999996431          1466899999999999998865

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.59  E-value=8.2e-15  Score=143.52  Aligned_cols=98  Identities=20%  Similarity=0.327  Sum_probs=79.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhc--------ccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVEN--------CNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--------~D~V  230 (437)
                      ++|+++||||+||||++++++|+++|++|++++|+.+. +.+.  ...+.++.+|++|.++++++++.        +|+|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE--AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence            46899999999999999999999999999999998653 1121  23578899999999998887763        5999


Q ss_pred             EEeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          231 IYCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       231 Ih~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                      |||||.....         ++..+++|+.|+.++++++
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  118 (277)
T PRK05993         81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRV  118 (277)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHH
Confidence            9999975321         3568999999988777766

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.59  E-value=8.2e-15  Score=142.00  Aligned_cols=149  Identities=23%  Similarity=0.146  Sum_probs=105.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      +.+|+++||||+||||++++++|+++|++|++++|+.+.  +.....+..+.++.+|++|.+++.++++.       +|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            568999999999999999999999999999999997652  12222344688899999999988887764       599


Q ss_pred             EEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          230 IIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       230 VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      ||||||+...              .|++.+++|+.+++++++++.+      .|.... +       +++..++....  
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~------~~~~~~-g-------~iv~~sS~~~~--  146 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP------ALVASR-G-------SVIFTISNAGF--  146 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH------HHhhcC-C-------CEEEEecccee--
Confidence            9999996321              2456899999999999999943      332111 1       23333332221  


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      .|......|+.+|.+...+......+.+
T Consensus       147 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~  174 (262)
T TIGR03325       147 YPNGGGPLYTAAKHAVVGLVKELAFELA  174 (262)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHhhc
Confidence            2322345688888877766655555544

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.1e-14  Score=141.57  Aligned_cols=98  Identities=29%  Similarity=0.375  Sum_probs=82.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~VIh  232 (437)
                      .+++++||||+|+||++++++|+++|++|++++|+.+..   ....++.++++|++|+++++++++.       +|+|||
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---APIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc---cccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            467899999999999999999999999999999975431   1124678999999999999999875       499999


Q ss_pred             eccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          233 CATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       233 ~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |||....         .+++++++|+.|+.++++++.
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~  116 (270)
T PRK06179         80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL  116 (270)
T ss_pred             CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            9997532         146789999999999999873

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.59  E-value=2.2e-14  Score=131.14  Aligned_cols=104  Identities=20%  Similarity=0.247  Sum_probs=88.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCC--CeEEEEecCCCHHHHHHHHhcc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPR--SVEIVLGDVGDPCTLKAAVENC-------  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~--~v~~v~~Dltd~~~v~~a~~~~-------  227 (437)
                      ++.|.++||||++|||++++..|++.|++|.+.+++...  +....++.  +...+.||+++.++++..+++.       
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            567899999999999999999999999999999998762  33445544  6778999999999998877753       


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ++|+||||++.+         .|++++.+|+.|++.+.+++.+.
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~  135 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRA  135 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHH
Confidence            999999999754         38899999999999999998665

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.59  E-value=5.5e-14  Score=134.22  Aligned_cols=105  Identities=16%  Similarity=0.227  Sum_probs=85.3

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +.+.+|+++||||+|+||+++++.|+++|++|++++|+.+.  ...+   ....++.++.+|++|.++++++++.     
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34678999999999999999999999999999999987652  1111   2234688999999999999888853     


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|+||||||....         .++..+++|+.+++++++++.+
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALP  128 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence              6999999997532         1456789999999999999844

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=4.1e-14  Score=135.90  Aligned_cols=101  Identities=21%  Similarity=0.276  Sum_probs=81.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HH---hhCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      .|++|||||+|+||+++++.|+++|++|++++|+....   ..   +.....+.++.+|++|++++.++++.       +
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999875421   11   12234688999999999998887763       5


Q ss_pred             cEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||....           .+++.+++|+.+++++++++.+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK  126 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence            999999997431           1456799999999999999844

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.58  E-value=1.2e-14  Score=139.58  Aligned_cols=249  Identities=19%  Similarity=0.194  Sum_probs=163.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCC--CCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLP--RSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      .+.|-++-|.|||||+|+.++.+|++.|-+|++-.|-.+..  .++..+  .++.++..|+.|+++++++++..++|||+
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            36788999999999999999999999999999999976521  222222  47899999999999999999999999999


Q ss_pred             ccCCCCc-hhhHHHHHHHHHHHHHHHHHhcCCc-e---eeeecCCcc-----hhhhhhhhhccCCCCcceeeccCcccch
Q 013761          234 ATARSTI-TGDLFRVDYQGVYNVTKAFQDFNNK-L---AQLRAGKSS-----KSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       234 Ag~~~~~-~~~~~~vNv~gt~~l~~aa~~~gvk-l---~~l~~~~~g-----~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      .|-..+. .-.+.++|+.++..+++.|++.||. +   +.+.+...+     .+|+..|..+.+.-..++|+||...+..
T Consensus       138 IGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~  217 (391)
T KOG2865|consen  138 IGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGT  217 (391)
T ss_pred             eccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccChHHHHHhhhhhHHHHHhhCCcceeechhhhccc
Confidence            9864322 2357889999999999999999983 4   444433333     4555556666666677889999754432


Q ss_pred             hhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc---cCCcEEEEEccCCCCCC
Q 013761          304 VVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG---GNGRSYVLILEAGPSAD  380 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l~~~~~~~  380 (437)
                      ...   -....+.+. .+++..  +     .++..+  +....|. ||-|++.||+.++.   ..|+.|.+.+     .+
T Consensus       218 eDr---fln~ya~~~-rk~~~~--p-----L~~~Ge--kT~K~PV-yV~DVaa~IvnAvkDp~s~Gktye~vG-----P~  278 (391)
T KOG2865|consen  218 EDR---FLNYYASFW-RKFGFL--P-----LIGKGE--KTVKQPV-YVVDVAAAIVNAVKDPDSMGKTYEFVG-----PD  278 (391)
T ss_pred             chh---HHHHHHHHH-HhcCce--e-----eecCCc--ceeeccE-EEehHHHHHHHhccCccccCceeeecC-----Cc
Confidence            110   000000000 001100  0     011111  1111222 78999999999995   4589998843     33


Q ss_pred             CCcHHHHHHHHHhhhC-Cce-ecccCCCccc--C--------CCCCCCCCHHHHhhc
Q 013761          381 RSQSKLYFARFSTKVG-FCR-VRVPFSSFRP--V--------KPDDPPMDPFLVHTM  425 (437)
Q Consensus       381 ~~s~~e~~~~i~~~~G-~~~-v~iP~~~~r~--~--------~~~~~~ld~~ki~~~  425 (437)
                      .....|+++.|.++.- |+. ++.|+..|..  .        .+...|+++++|+.+
T Consensus       279 ~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~  335 (391)
T KOG2865|consen  279 RYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERL  335 (391)
T ss_pred             hhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhhe
Confidence            5678899998888764 432 3344432211  1        123335899888765

>PRK06196 oxidoreductase; Provisional

Probab=99.58  E-value=9.8e-15  Score=145.78  Aligned_cols=102  Identities=23%  Similarity=0.256  Sum_probs=83.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +.+|+|+||||+||||++++++|+++|++|++++|+.+.  +....+ ..+.++.+|++|.++++++++       .+|+
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l-~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-DGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-hhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            678999999999999999999999999999999998652  122222 247889999999999988875       3699


Q ss_pred             EEEeccCCCC-------chhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST-------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~-------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||+...       .++..+++|+.|++++++++.+
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~  141 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWP  141 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHH
Confidence            9999997532       2567899999999988887743

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.58  E-value=3.2e-14  Score=136.86  Aligned_cols=104  Identities=21%  Similarity=0.236  Sum_probs=84.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.+|++|||||+|+||+++++.|+++|++|++++|+.+.  ....+   ....+.++.+|++|.++++++++.       
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999998652  11122   234688999999999999887764       


Q ss_pred             ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 ~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +|+||||||....          .+++.+++|+.|+..+++++.+.
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  128 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPA  128 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            5999999987432          14568999999999999998653

>PRK06128 oxidoreductase; Provisional

Probab=99.58  E-value=2.5e-14  Score=141.91  Aligned_cols=104  Identities=20%  Similarity=0.249  Sum_probs=84.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH----HH---HhhCCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ----EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~----~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      .+.+|++|||||+||||+++++.|+++|++|++..++.+.    +.   +.....++.++.+|++|.++++++++.    
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            3778999999999999999999999999999988875431    11   122245678899999999999888763    


Q ss_pred             ---ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 ---CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                         +|+||||||....          .+++.+++|+.|++++++++.+
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  179 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP  179 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence               5999999996421          2567899999999999999954

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1e-14  Score=144.80  Aligned_cols=107  Identities=21%  Similarity=0.242  Sum_probs=85.5

Q ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhc-
Q 013761          155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVEN-  226 (437)
Q Consensus       155 ~~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~-  226 (437)
                      .++++.+|+|+||||+||||++++++|+++|++|++++|+.+.  +..+.+     ...+.++.+|++|.++++++++. 
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            4567889999999999999999999999999999999997652  111111     24678999999999999888763 


Q ss_pred             ------ccEEEEeccCCCC-------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 ------CNKIIYCATARST-------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ------~D~VIh~Ag~~~~-------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                            +|+||||||....       .++..+++|+.|++.+++.+.+
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~  137 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLD  137 (306)
T ss_pred             HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHH
Confidence                  5999999997432       2466899999998877776643

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.5e-14  Score=141.70  Aligned_cols=148  Identities=17%  Similarity=0.171  Sum_probs=103.3

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ..+.+++++||||+||||+++++.|+++|++|++++|+.+.  +..+   .....+.++.+|++|.+++.++++      
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34778999999999999999999999999999999998652  1111   223467889999999999998887      


Q ss_pred             -cccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 -NCNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                       .+|+||||||....           .++..+++|+.|+.++++++.      +.|.....+       +++..++....
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~------~~~~~~~~g-------~iv~isS~~~~  182 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA------PGMLERGDG-------HIINVATWGVL  182 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHH------HHHHhcCCc-------EEEEECChhhc
Confidence             56999999997532           124579999999999999883      333222111       23333332211


Q ss_pred             eeccCcccchhhhhhhhcccchhhh
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                      . .+......|+.+|.+...+....
T Consensus       183 ~-~~~p~~~~Y~asKaal~~l~~~l  206 (293)
T PRK05866        183 S-EASPLFSVYNASKAALSAVSRVI  206 (293)
T ss_pred             C-CCCCCcchHHHHHHHHHHHHHHH
Confidence            1 11112456888888776554433

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=7.6e-14  Score=132.98  Aligned_cols=103  Identities=30%  Similarity=0.356  Sum_probs=84.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.+++++||||+|+||++++++|+++|++|++++|+.+.  +.   ....+.++.++.+|++|++++.++++       .
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999998652  11   12224468889999999999988887       4


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....         .+++.+++|+.++.++++++.+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLP  128 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            7999999997432         1356799999999999998854

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.58  E-value=1e-14  Score=141.25  Aligned_cols=103  Identities=23%  Similarity=0.302  Sum_probs=84.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.  .....+...+.++++|++|.++++++++.       +|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            678999999999999999999999999999999998652  22233455688899999999999888764       599


Q ss_pred             EEEeccCCCC-------c-------hhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST-------I-------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~-------~-------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||+...       .       +++.+++|+.+++.+++++.+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  129 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP  129 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence            9999997421       1       455789999999999999843

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.58  E-value=1.3e-14  Score=138.12  Aligned_cols=149  Identities=14%  Similarity=0.123  Sum_probs=103.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..  ....  ..+.++.+|++|.++++++++.       +|+|
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ--AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH--cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence            357999999999999999999999999999999986532  1222  2467899999999999887764       5999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      |||||....         .+++.+++|+.+++.+++++.      +.|......     ...++..++....  .+....
T Consensus        79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~------~~~~~~~~~-----~g~iv~~ss~~~~--~~~~~~  145 (236)
T PRK06483         79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALE------DLLRGHGHA-----ASDIIHITDYVVE--KGSDKH  145 (236)
T ss_pred             EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHH------HHHHhCCCC-----CceEEEEcchhhc--cCCCCC
Confidence            999997421         156789999999999999884      333221100     0023333333222  122234


Q ss_pred             chhhhhhhhcccchhhhhcccc
Q 013761          302 QDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      ..|+.+|.+.+.+......+++
T Consensus       146 ~~Y~asKaal~~l~~~~a~e~~  167 (236)
T PRK06483        146 IAYAASKAALDNMTLSFAAKLA  167 (236)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHC
Confidence            5688888887776655555443

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.6e-14  Score=138.49  Aligned_cols=102  Identities=22%  Similarity=0.231  Sum_probs=83.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----C-CCCeEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----L-PRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~-~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+.  ...+.    . ...+.++.+|++|.++++++++.    
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999999998652  11111    1 23677899999999999887764    


Q ss_pred             ---ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          227 ---CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                         +|+||||||....         .+.+.+++|+.+++++++++
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  129 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAF  129 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence               4999999997432         25678999999999999988

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=4.5e-14  Score=134.92  Aligned_cols=103  Identities=23%  Similarity=0.284  Sum_probs=84.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      +.++++|||||+|+||+++++.|+++|++|++++|+.+.  .....+  ...+.++.+|++|.+++.++++.       +
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            567899999999999999999999999999999998752  122222  24578999999999999988865       4


Q ss_pred             cEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+|||+||....          .+++.+++|+.+++++++.+.+
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP  126 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            999999997421          1456899999999999998854

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.57  E-value=1.7e-14  Score=138.13  Aligned_cols=103  Identities=22%  Similarity=0.267  Sum_probs=85.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +++|++|||||+|+||++++++|+++|++|++++|+....   .....+..+.++.+|++|.+++.++++.       +|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6789999999999999999999999999999999975322   2233455788999999999999877763       59


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||....         .+++.+++|+.+++++++++.+
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  124 (248)
T TIGR01832        83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAK  124 (248)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            99999997532         1456899999999999999843

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=2.1e-14  Score=138.50  Aligned_cols=102  Identities=21%  Similarity=0.310  Sum_probs=81.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~VI  231 (437)
                      +.+|+++||||+|+||++++++|+++|++|+++.++.+..........+.++.+|++|+++++++++.       +|+||
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57899999999999999999999999999998877654311111122578899999999999988874       59999


Q ss_pred             EeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          232 YCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       232 h~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||||....         .+++.+++|+.|++++++++.
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l  122 (255)
T PRK06463         85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFL  122 (255)
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence            99997431         145689999999999988873

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.57  E-value=8.1e-14  Score=133.87  Aligned_cols=104  Identities=17%  Similarity=0.189  Sum_probs=82.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++++++++||||+|+||+++++.|+++|++|+++ .|+.+.  .....   ....+.++.+|++|.+++.++++      
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            3677999999999999999999999999999876 565432  11111   23468889999999999988877      


Q ss_pred             -------cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          226 -------NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 -------~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                             .+|+||||||.....         ++..+++|+.|+.++++++.+
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  134 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLP  134 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                   379999999974321         355788999999999999865

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.1e-14  Score=138.66  Aligned_cols=101  Identities=20%  Similarity=0.192  Sum_probs=83.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-CCCeEEEEecCCCHHHHHHHHhc--------ccE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-PRSVEIVLGDVGDPCTLKAAVEN--------CNK  229 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~--------~D~  229 (437)
                      ||++|||||+|+||++++++|+++|++|++++|+.+.  +....+ ...+.++++|++|.+++.++++.        +|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            4789999999999999999999999999999998663  122222 34688999999999999888764        499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||.....         ++..+++|+.+++++++++.+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  121 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP  121 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99999975321         456899999999999998843

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.1e-14  Score=136.88  Aligned_cols=146  Identities=15%  Similarity=0.100  Sum_probs=100.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC-cH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA-DQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~-~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +++|+++||||+||||++++++|++.|++|++.+++. +.  +.   +......+..+.+|++|.+++..+++       
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            5679999999999999999999999999999876432 21  11   11223457788999999887765543       


Q ss_pred             ------cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          226 ------NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       226 ------~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                            .+|+||||||.....         +++++++|+.|++++++++.+      .|...  +       +++..++.
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~------~~~~~--g-------~iv~isS~  146 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS------RLRDN--S-------RIINISSA  146 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH------HhhcC--C-------eEEEECCc
Confidence                  479999999974321         466889999999999999843      33211  1       34444444


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ......|  ....|+.+|.+..........+
T Consensus       147 ~~~~~~~--~~~~Y~~sKaa~~~~~~~la~e  175 (252)
T PRK12747        147 ATRISLP--DFIAYSMTKGAINTMTFTLAKQ  175 (252)
T ss_pred             ccccCCC--CchhHHHHHHHHHHHHHHHHHH
Confidence            4332222  2456888888776665444433

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.3e-14  Score=137.24  Aligned_cols=102  Identities=24%  Similarity=0.244  Sum_probs=83.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      +++|+++||||+|+||++|+++|+++|++|++++|+.+.  +....+  +..+.++.+|++|.++++++++       .+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999998652  112222  4468899999999999998886       46


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |+||||||.....         +++.+++|+.++.++++++.
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAI  124 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHH
Confidence            9999999974321         45579999999999888774

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=2.1e-14  Score=137.57  Aligned_cols=149  Identities=16%  Similarity=0.108  Sum_probs=103.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhCCCCeEEEEecCCCHHHHHHHHhc--------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDMLPRSVEIVLGDVGDPCTLKAAVEN--------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--------~  227 (437)
                      +++|++|||||+|+||+++++.|+++|++|++++++...   ........++.++.+|++|.+++.++++.        +
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            567899999999999999999999999999987665432   12223345788899999999999888864        7


Q ss_pred             cEEEEeccCCC-------C--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          228 NKIIYCATARS-------T--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       228 D~VIh~Ag~~~-------~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                      |+||||||...       .        .+.+.+++|+.+++++++++.+      .+.....+       +++..++...
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~g-------~iv~iss~~~  149 (253)
T PRK08642         83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALP------GMREQGFG-------RIINIGTNLF  149 (253)
T ss_pred             eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH------HHHhcCCe-------EEEEECCccc
Confidence            99999998631       0        1356799999999999999943      22211111       2333222211


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                        ..|..+...|+.+|.+.+.+......++
T Consensus       150 --~~~~~~~~~Y~~sK~a~~~l~~~la~~~  177 (253)
T PRK08642        150 --QNPVVPYHDYTTAKAALLGLTRNLAAEL  177 (253)
T ss_pred             --cCCCCCccchHHHHHHHHHHHHHHHHHh
Confidence              1233335678888888777665544443

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.57  E-value=7e-14  Score=133.85  Aligned_cols=101  Identities=27%  Similarity=0.295  Sum_probs=82.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcc----cEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENC----NKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~----D~VIh~Ag  235 (437)
                      +++++||||+||||+++++.|+++|++|++++|+.+. +........+.++.+|++|.++++++++.+    |++|||||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            3689999999999999999999999999999998652 122222346888999999999999999874    89999998


Q ss_pred             CCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          236 ARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       236 ~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ....         .+++.+++|+.|+.++++++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  115 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQP  115 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5321         1456899999999999999854

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.6e-14  Score=139.45  Aligned_cols=99  Identities=20%  Similarity=0.256  Sum_probs=82.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.+.    .....+.++.+|++|.++++++++.       +|+|
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD----DLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh----hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999998643    2344688899999999998877653       5999


Q ss_pred             EEeccCCCC-----------chhhHHHHHHHHHHHHHHHHH
Q 013761          231 IYCATARST-----------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       231 Ih~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |||||....           .+++.+++|+.|++++++++.
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  122 (260)
T PRK06523         82 VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALL  122 (260)
T ss_pred             EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence            999996321           256689999999999998873

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.7e-14  Score=135.50  Aligned_cols=103  Identities=23%  Similarity=0.294  Sum_probs=84.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+.  +..+.++..+.++++|++|.+++.++++       .+|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            568899999999999999999999999999999997542  2233445578889999999998877665       3599


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||....         .+++.+++|+.+++++++++.+
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP  124 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999997432         1456899999999999999954

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=2.1e-14  Score=138.87  Aligned_cols=146  Identities=11%  Similarity=0.066  Sum_probs=103.9

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhC-CCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDML-PRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      |++|+++||||+  +|||++++++|+++|++|++.+|+... +..+++ ...+.++++|++|+++++++++.       +
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            678999999999  799999999999999999999997431 222222 34678899999999999887764       4


Q ss_pred             cEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          228 NKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       228 D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                      |+||||||....             .++..+++|+.+++.+++++      ++.|...  +       +++..++.....
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~------~~~~~~~--g-------~Iv~iss~~~~~  149 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYA------RPLLNPG--A-------SIVTLTYFGSER  149 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHH------HHhcccC--c-------eEEEEeccCccc
Confidence            999999997531             15668999999999999999      4444321  1       344444433322


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ..|  ....|+.+|.+...+......+
T Consensus       150 ~~~--~~~~Y~asKaal~~l~~~la~e  174 (252)
T PRK06079        150 AIP--NYNVMGIAKAALESSVRYLARD  174 (252)
T ss_pred             cCC--cchhhHHHHHHHHHHHHHHHHH
Confidence            223  2456788887766665444333

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.56  E-value=6.4e-14  Score=134.09  Aligned_cols=100  Identities=17%  Similarity=0.225  Sum_probs=81.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----C-CCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----L-PRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~-~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +|+++||||+||||++++++|+++|++|++++|+.+.  +....    . ...+.++.+|++|.+++.++++.       
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999998652  11111    1 34688999999999999887763       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|+||||||+....         +.+.+++|+.++.++++++.
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  124 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAM  124 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            69999999975332         34578999999999999884

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.56  E-value=5.8e-14  Score=137.10  Aligned_cols=101  Identities=21%  Similarity=0.302  Sum_probs=80.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hC--CCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---ML--PRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~--~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      |+++++|||||+|+||+++++.|+++|++|++++|+.+.  ....   ..  ...+.++.+|++|++++++ ++.     
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            356899999999999999999999999999999998652  1111   11  2468899999999998876 543     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                        +|+||||||.....         +++.+++|+.|++++++++.
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVL  124 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence              59999999975421         45678999999999999873

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.4e-14  Score=136.56  Aligned_cols=101  Identities=23%  Similarity=0.210  Sum_probs=83.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhcc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVENC------  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~~------  227 (437)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+.  .   ........+.++.+|++|.+++.++++.+      
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999999999999999998652  1   12223456889999999999999888754      


Q ss_pred             -cEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHH
Q 013761          228 -NKIIYCATARST----------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       228 -D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa  259 (437)
                       |+||||||....          .+++.+++|+.+++++++++
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  127 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQ  127 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence             999999997421          14568999999999998887

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.56  E-value=2.9e-14  Score=138.11  Aligned_cols=150  Identities=11%  Similarity=0.109  Sum_probs=103.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhh----CCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDM----LPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~----~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      +|++|++|||||++|||++++++|+++|++|++++|+..+   ...+.    ...++.++.+|++|+++++++++.    
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3788999999999999999999999999999988765432   11111    234688999999999999888874    


Q ss_pred             ---ccEEEEeccCCCC---------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCC
Q 013761          227 ---CNKIIYCATARST---------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSAD  288 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~---------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~s  288 (437)
                         +|+||||||+...               .+...+++|+.+.+.+++++.      +.|.....+       +++..+
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~------~~~~~~~~g-------~iv~is  151 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAA------KRMEKVGGG-------SIISLS  151 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHH------HhhhccCCE-------EEEEEe
Confidence               5999999986320               144589999999999998883      333322111       344444


Q ss_pred             CCcceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          289 SLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       289 sl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      +.......|+  ...|+.+|.+.+.+......++
T Consensus       152 S~~~~~~~~~--~~~Y~asK~a~~~~~~~la~el  183 (260)
T PRK08416        152 STGNLVYIEN--YAGHGTSKAAVETMVKYAATEL  183 (260)
T ss_pred             ccccccCCCC--cccchhhHHHHHHHHHHHHHHh
Confidence            4433222232  4567778877766665444443

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=2.5e-14  Score=140.50  Aligned_cols=144  Identities=14%  Similarity=0.152  Sum_probs=102.2

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc-HH----HHhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD-QE----VVDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~-~~----~~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      |.+|++|||||+  +|||++++++|+++|++|++.+|+.. .+    ..+++... .++++|++|.++++++++.     
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999997  79999999999999999999999753 11    11223333 6789999999999888764     


Q ss_pred             --ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 --CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 --~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                        +|+||||||+...             .+++.+++|+.|++++++++      ++.|...  +       +++..+++.
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~p~m~~~--g-------~Iv~isS~~  146 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRAL------LPLLNDG--A-------SVLTLSYLG  146 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHH------HHHhccC--C-------cEEEEecCC
Confidence              4999999997421             15668999999999999999      5555321  1       344444443


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhc
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                      .....|  ....|..+|.+...+......
T Consensus       147 ~~~~~~--~~~~Y~asKaal~~l~~~la~  173 (274)
T PRK08415        147 GVKYVP--HYNVMGVAKAALESSVRYLAV  173 (274)
T ss_pred             CccCCC--cchhhhhHHHHHHHHHHHHHH
Confidence            322223  245677777776655544333

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.2e-14  Score=136.74  Aligned_cols=100  Identities=25%  Similarity=0.281  Sum_probs=81.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--H---HhhCCCCeEEEEecCCCHHHHHHHHh-cccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--V---VDMLPRSVEIVLGDVGDPCTLKAAVE-NCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~---~~~~~~~v~~v~~Dltd~~~v~~a~~-~~D~VIh~A  234 (437)
                      ++++|||||+|+||+++++.|++.|++|++++|+.+..  .   .......+.++.+|++|++++.++++ ++|+|||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            57899999999999999999999999999999975421  1   11223468899999999999999887 789999999


Q ss_pred             cCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          235 TARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       235 g~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |.....         ++..+++|+.|+.++++++.
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  116 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFV  116 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            975321         45688999999998887663

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.56  E-value=3.7e-14  Score=136.80  Aligned_cols=148  Identities=16%  Similarity=0.154  Sum_probs=103.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +.+|+++||||+|+||++++++|+++|++|+++++....+.   +......+.++++|++|.++++++++.       +|
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            67899999999999999999999999999999887644222   223345678899999999999988874       59


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||....         .+++.+++|+.+++++++++.+      .|.... .+       +++..++....  .+.
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~------~~~~~~~~g-------~iv~isS~~~~--~~~  152 (253)
T PRK08993         88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAK------HFIAQGNGG-------KIINIASMLSF--QGG  152 (253)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH------HHHhCCCCe-------EEEEECchhhc--cCC
Confidence            99999997431         2567899999999999999843      222111 11       23333333222  122


Q ss_pred             cccchhhhhhhhcccchhhhhcc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      .....|+.+|.+.+.+......+
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e  175 (253)
T PRK08993        153 IRVPSYTASKSGVMGVTRLMANE  175 (253)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHH
Confidence            23456778887766655444333

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.55  E-value=3.7e-14  Score=136.52  Aligned_cols=103  Identities=18%  Similarity=0.181  Sum_probs=84.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      |.+|++|||||+|+||++++++|+++|++|++++|+.+.  +...+   ....+.++.+|++|.++++++++.       
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999998652  11222   234677889999999999988764       


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....         .+++.+++|+.+++++++++.+
T Consensus        87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (254)
T PRK08085         87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVAR  130 (254)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5999999997431         2566899999999999998854

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.3e-13  Score=133.60  Aligned_cols=103  Identities=19%  Similarity=0.276  Sum_probs=84.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh--CCCCeEEEEecCCCHHHHHHHHhc------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM--LPRSVEIVLGDVGDPCTLKAAVEN------CN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~--~~~~v~~v~~Dltd~~~v~~a~~~------~D  228 (437)
                      +.++++|||||+|+||++++++|+++|++|++++|+.+.  ....+  .+..+.++.+|++|.++++++++.      +|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            567899999999999999999999999999999998652  11122  244788999999999998887763      59


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||.....         +.+.+++|+.|+.++++++.+
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  124 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLP  124 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            999999975321         356889999999999999844

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=1.9e-13  Score=130.81  Aligned_cols=197  Identities=19%  Similarity=0.153  Sum_probs=121.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---H---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---V---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +.++++|||||+||||++++++|+++|++|++..|+....   .   ....+..+.++.+|++|.+++.++++.      
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999998877654321   1   112234677889999999998888764      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                       +|+||||||.....         +++.+++|+.++.++++++.+...+      .         .+++..++....  .
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~---------~~iv~~sS~~~~--~  146 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE------G---------GAIVNIASVAGI--R  146 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc------C---------cEEEEEcchhcc--C
Confidence             59999999974321         3567899999999999998543211      0         023333332221  2


Q ss_pred             cCcccchhhhhhhhcccchhhhhccccc-----ceeeeeeeccCcc-----cee-----ccccC--CCcccHHHHHHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGD-----AVFSGYVFTRGGY-----VEL-----SKKLS--LPLGCTLDRYEGLV  359 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~-----~v~~g~~~~~~G~-----~~i-----~~~~~--~p~g~v~D~~~gi~  359 (437)
                      |......|+.+|...+........++..     .+.++.+.++.+.     ...     .+.+.  ....+++|++++++
T Consensus       147 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  226 (252)
T PRK06077        147 PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVA  226 (252)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHH
Confidence            3333566777777666555444443322     1122222222110     000     00110  11236899999999


Q ss_pred             HHhc---cCCcEEEEE
Q 013761          360 LSVG---GNGRSYVLI  372 (437)
Q Consensus       360 l~~~---~~Ge~y~l~  372 (437)
                      ..+.   ..|+.|.+.
T Consensus       227 ~~~~~~~~~g~~~~i~  242 (252)
T PRK06077        227 AILKIESITGQVFVLD  242 (252)
T ss_pred             HHhCccccCCCeEEec
Confidence            8884   346777664

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.55  E-value=4.4e-14  Score=136.05  Aligned_cols=105  Identities=18%  Similarity=0.165  Sum_probs=85.8

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.+.  +.   ++.....+.++.+|++|++++.+++++     
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            34789999999999999999999999999999999998652  11   122344688999999999999888875     


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|+||||||....         .+++.+++|+.+++++++++.+
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  132 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQ  132 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence              3899999997532         1456899999999999988844

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.55  E-value=4.5e-14  Score=137.87  Aligned_cols=103  Identities=21%  Similarity=0.268  Sum_probs=83.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+.  ...+   ..+.++.++++|++|.+++..+++       .
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999997642  1112   223467889999999999988776       4


Q ss_pred             ccEEEEeccCCCC------------------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST------------------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~------------------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....                        .+++.+++|+.+++.+++++.+
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  146 (278)
T PRK08277         88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAK  146 (278)
T ss_pred             CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            6999999995321                        1456899999999999888733

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.55  E-value=2.9e-14  Score=141.27  Aligned_cols=104  Identities=24%  Similarity=0.308  Sum_probs=84.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhc-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      ++.++++|||||+|+||+++++.|+++|++|++++|+.+.  +..+.+.  ..+..+.+|++|.++++++++.       
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4778999999999999999999999999999999998652  2223332  3456677999999999888764       


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||+...         .+++++++|+.|++++++++..
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~  129 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLP  129 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5999999997432         1467899999999999999843

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=5.1e-14  Score=140.32  Aligned_cols=150  Identities=17%  Similarity=0.103  Sum_probs=104.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ++++|+++||||+||||++++++|+++|++|++.++....   ...+   ..+..+.++.+|++|.+++.++++.     
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999886431   1112   2245688999999999999888764     


Q ss_pred             -ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCc--chhhhhhhhhccCCCCccee
Q 013761          227 -CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKS--SKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 -~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~--g~sk~~~~k~v~~ssl~~~i  294 (437)
                       +|+||||||+...         .+++.+++|+.|++++++++..      +|.....  +...+  .+++..++.....
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~------~~~~~~~~~~~~~~--g~iv~isS~~~~~  160 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA------YWRAKAKAAGGPVY--GRIVNTSSEAGLV  160 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH------HHHHhhcccCCCCC--cEEEEECCccccc
Confidence             6999999997542         2566899999999999999843      2221100  00000  1344444443322


Q ss_pred             eccCcccchhhhhhhhcccchhh
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~  317 (437)
                      ..+  ....|+.+|.+...+...
T Consensus       161 ~~~--~~~~Y~asKaal~~l~~~  181 (306)
T PRK07792        161 GPV--GQANYGAAKAGITALTLS  181 (306)
T ss_pred             CCC--CCchHHHHHHHHHHHHHH
Confidence            222  245688888776665543

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.2e-14  Score=135.87  Aligned_cols=150  Identities=19%  Similarity=0.182  Sum_probs=104.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+.  ...+   .....+.++++|++|.++++++++.      
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999997542  1112   2234578899999999999887764      


Q ss_pred             -ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 -CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 -~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       +|+||||||....          .++..+++|+.+++++++++.+      .+.....       ..++..++....  
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~-------~~iv~~sS~~~~--  149 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGK------LMKEQGG-------GSIVNVASVNGV--  149 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHhCCC-------cEEEEECchhhc--
Confidence             5999999996321          1456899999999999998843      2221111       123333332221  


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|......|+.+|.+.+.+......++
T Consensus       150 ~~~~~~~~Y~~sK~al~~~~~~l~~e~  176 (252)
T PRK07035        150 SPGDFQGIYSITKAAVISMTKAFAKEC  176 (252)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            233345678888887776665544443

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.4e-13  Score=130.25  Aligned_cols=102  Identities=23%  Similarity=0.225  Sum_probs=82.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-CCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-PRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +.+|++|||||+|+||+++++.|+++|++|++++|+...  +....+ ...+.++.+|++|.++++++++.       +|
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            568999999999999999999999999999999997652  222222 33577888999999999888873       69


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|||+||.....         +.+.+.+|+.++.++++++.
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  125 (239)
T PRK12828         85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL  125 (239)
T ss_pred             EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHH
Confidence            999999964321         34578899999999999884

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.55  E-value=5.2e-14  Score=136.57  Aligned_cols=149  Identities=15%  Similarity=0.153  Sum_probs=103.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.++++|||||+||||+++++.|+++|++|++++|+.+.  +...   .....+.++.+|++|++++.++++       .
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  1111   124468889999999999988876       4


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+||||||....         .+.+.+++|+.++.++++++.+.      |......      .+++..++.....  |
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~------g~iv~~sS~~~~~--~  153 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPL------MLEHSGG------GSVINISSTMGRL--A  153 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHH------HHhhcCC------eEEEEEccccccC--C
Confidence            5999999996422         14568999999999999999532      2110000      0233333332221  2


Q ss_pred             Ccccchhhhhhhhcccchhhhhcc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ......|+.+|.+.+........+
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~e  177 (263)
T PRK07814        154 GRGFAAYGTAKAALAHYTRLAALD  177 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHH
Confidence            223566888887766555444333

>PRK07985 oxidoreductase; Provisional

Probab=99.55  E-value=6.3e-14  Score=138.83  Aligned_cols=146  Identities=16%  Similarity=0.182  Sum_probs=101.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH----HH---HhhCCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ----EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~----~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+.    +.   ....+..+.++.+|++|.+++.++++.    
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4778999999999999999999999999999998875431    11   112244678899999999998887764    


Q ss_pred             ---ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          227 ---CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                         +|++|||||....          .+++.+++|+.|++++++++.+      .|...  +       +++..++....
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~m~~~--g-------~iv~iSS~~~~  190 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP------LLPKG--A-------SIITTSSIQAY  190 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH------hhhcC--C-------EEEEECCchhc
Confidence               5999999996421          1567899999999999999944      33211  1       24444443322


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhc
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                      ...|  ....|+.+|.+...+......
T Consensus       191 ~~~~--~~~~Y~asKaal~~l~~~la~  215 (294)
T PRK07985        191 QPSP--HLLDYAATKAAILNYSRGLAK  215 (294)
T ss_pred             cCCC--CcchhHHHHHHHHHHHHHHHH
Confidence            2122  245677777776655544333

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.6e-14  Score=135.68  Aligned_cols=104  Identities=20%  Similarity=0.265  Sum_probs=84.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhC-CCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDML-PRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~-~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+.+.. ..... ...+.++.+|++|.++++++++.       +|
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            36789999999999999999999999999999999976531 12222 34567899999999999888764       59


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||....         .+.+.+++|+.|++++++++.+
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  133 (255)
T PRK06841         92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGR  133 (255)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHH
Confidence            99999997532         1456899999999999999854

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.2e-13  Score=132.00  Aligned_cols=101  Identities=18%  Similarity=0.246  Sum_probs=82.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHhc----ccEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVEN----CNKI  230 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~~----~D~V  230 (437)
                      ||+++||||+||||++++++|+++|++|++++|+.+.  ...+.    ...++.++++|++|+++++++++.    +|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            4689999999999999999999999999999998752  11111    134788999999999999888775    4999


Q ss_pred             EEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |||||.....         +.+.+++|+.++.++++++..
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLAN  120 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            9999974321         345789999999999998844

>PRK08643 acetoin reductase; Validated

Probab=99.54  E-value=7e-14  Score=134.63  Aligned_cols=102  Identities=24%  Similarity=0.272  Sum_probs=82.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      ++|++|||||+|+||+++++.|+++|++|++++|+.+.  ....   .....+.++.+|++|++++.++++.       +
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999998652  1112   2235678899999999998888764       5


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||.....         +++.+++|+.++.++++++.+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE  123 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            9999999974321         456899999999999988854

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.54  E-value=6.3e-14  Score=136.02  Aligned_cols=103  Identities=17%  Similarity=0.167  Sum_probs=85.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+.  +..   ...+.++.++++|++|.++++++++.       
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            678999999999999999999999999999999987652  111   12244688999999999999998875       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||.....         +.+.+++|+.|++.+++++..
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (265)
T PRK07097         88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIP  131 (265)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            59999999975421         456899999999999998843

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.54  E-value=4.5e-14  Score=139.26  Aligned_cols=150  Identities=18%  Similarity=0.102  Sum_probs=103.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC---------cH--HHHhh---CCCCeEEEEecCCCHHHHHHHH
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA---------DQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAV  224 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~---------~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~  224 (437)
                      +++|++|||||+++||++++++|++.|++|++++|+.         +.  +..++   ....+.++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            6789999999999999999999999999999998864         21  11222   2346788999999999998877


Q ss_pred             hc-------ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccC
Q 013761          225 EN-------CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSA  287 (437)
Q Consensus       225 ~~-------~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~  287 (437)
                      +.       +|+||||||+...         .+++++++|+.|++++++++.      +.|.... .+...  ...++..
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~~~~~~~~~~~~--~g~Iv~i  155 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA------AYWRAESKAGRAV--DARIINT  155 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH------HHHHHhcccCCCC--CcEEEEe
Confidence            64       4999999997532         156789999999999999983      3332110 00000  0134554


Q ss_pred             CCCcceeeccCcccchhhhhhhhcccchhhh
Q 013761          288 DSLNGWEVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       288 ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                      ++.......|+  ...|+.+|.+...+....
T Consensus       156 sS~~~~~~~~~--~~~Y~asKaal~~l~~~l  184 (286)
T PRK07791        156 SSGAGLQGSVG--QGNYSAAKAGIAALTLVA  184 (286)
T ss_pred             CchhhCcCCCC--chhhHHHHHHHHHHHHHH
Confidence            54433332232  456778877766555433

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.54  E-value=7.6e-14  Score=134.72  Aligned_cols=105  Identities=20%  Similarity=0.270  Sum_probs=84.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+.  ...   ......+.++.+|++|+++++++++.      
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999997652  111   12234678899999999999777754      


Q ss_pred             -ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 -CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 -~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       +|+||||||....         .+.+.+++|+.+++++++++.+.
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  134 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKR  134 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence             5999999996422         14568899999999999988553

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.54  E-value=6.5e-14  Score=134.08  Aligned_cols=104  Identities=17%  Similarity=0.262  Sum_probs=82.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEE-EecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKA-LVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~-~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |.+++++||||+|+||++++++|+++|++|++ .+|+.+.  +.   .+..+..+.++.+|++|++++.++++.      
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999877 4665442  11   222345688899999999999988874      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       +|+||||||.....         +...+++|+.++.++++++.+.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKL  127 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence             59999999964321         3447889999999999999653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.54  E-value=6.1e-14  Score=137.36  Aligned_cols=145  Identities=12%  Similarity=0.106  Sum_probs=102.7

Q ss_pred             CCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCcH-HHH----hhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKADQ-EVV----DMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~----~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      |++|++|||||++  |||++++++|+++|++|++.+|+... +..    +..+ ...++++|++|.++++++++.     
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            6789999999997  99999999999999999999987531 111    1222 235789999999999888764     


Q ss_pred             --ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 --CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 --~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                        +|+||||||+...             .|++.+++|+.+++++++++      ++.|...  +       .++..++..
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~------~~~m~~~--G-------~Iv~isS~~  148 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRA------AKLMPDG--G-------SMLTLTYGG  148 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHH------HHhhccC--c-------eEEEEcCCC
Confidence              4999999997531             15668999999999999998      5555321  1       345545443


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      .....|+  +..|..+|.+...+......+
T Consensus       149 ~~~~~~~--~~~Y~asKaAl~~l~r~la~e  176 (271)
T PRK06505        149 STRVMPN--YNVMGVAKAALEASVRYLAAD  176 (271)
T ss_pred             ccccCCc--cchhhhhHHHHHHHHHHHHHH
Confidence            3322332  456788887766555443333

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.54  E-value=8.1e-14  Score=133.94  Aligned_cols=100  Identities=23%  Similarity=0.306  Sum_probs=81.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKIIY  232 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VIh  232 (437)
                      |+++||||+|+||.++++.|+++|++|++++|+.+.  .....+...+.++.+|++|.++++++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            579999999999999999999999999999998652  2222334578899999999999988776       4799999


Q ss_pred             eccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          233 CATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       233 ~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||....          .+++++++|+.|+.++++++.+
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  119 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLP  119 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            9997421          1456899999999998888743

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.54  E-value=8.3e-14  Score=134.29  Aligned_cols=144  Identities=13%  Similarity=0.125  Sum_probs=100.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.+|+|+||||+|+||++++++|+++|++|++++|+.+.  ..   ......++.++.+|++|.+++.++++.       
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999987652  11   122234678899999999999887764       


Q ss_pred             ccEEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          227 CNKIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       227 ~D~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +|+||||||....        .+++.+++|+.+++++++++..      .|.....+       +++..++....  .+.
T Consensus        89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~~-------~iv~isS~~~~--~~~  153 (255)
T PRK06113         89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAP------EMEKNGGG-------VILTITSMAAE--NKN  153 (255)
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHH------HHHhcCCc-------EEEEEeccccc--CCC
Confidence            4999999997432        1455799999999999999843      22211110       23333333222  222


Q ss_pred             cccchhhhhhhhcccchhh
Q 013761          299 TYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~  317 (437)
                      .....|+.+|.+.+.+...
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~  172 (255)
T PRK06113        154 INMTSYASSKAAASHLVRN  172 (255)
T ss_pred             CCcchhHHHHHHHHHHHHH
Confidence            2345677888776665543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.53  E-value=6.2e-14  Score=136.01  Aligned_cols=141  Identities=13%  Similarity=0.099  Sum_probs=99.3

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcH-HHH----hhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQ-EVV----DMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~----~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +.+|++|||||+  +|||++++++|+++|++|++++|+.+. +..    +++ ..+.++.+|++|.++++++++.     
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL-DAPIFLPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh-ccceEEecCcCCHHHHHHHHHHHHHHc
Confidence            678999999998  599999999999999999999997542 111    122 2356789999999999888764     


Q ss_pred             --ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 --CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 --~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                        +|++|||||+...             .+++.+++|+.|++++++++      ++.|...  +       .++..++..
T Consensus        87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~------~p~m~~~--g-------~Ii~iss~~  151 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLA------EPLMTNG--G-------SLLTMSYYG  151 (258)
T ss_pred             CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHH------HHHhccC--C-------EEEEEeccc
Confidence              4999999997421             15678999999999999998      4555321  1       233333332


Q ss_pred             ceeeccCcccchhhhhhhhcccchhh
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~  317 (437)
                      .....|  ....|+.+|.+...+...
T Consensus       152 ~~~~~~--~~~~Y~asKaal~~l~~~  175 (258)
T PRK07533        152 AEKVVE--NYNLMGPVKAALESSVRY  175 (258)
T ss_pred             cccCCc--cchhhHHHHHHHHHHHHH
Confidence            221122  245677777766555443

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.1e-14  Score=135.30  Aligned_cols=146  Identities=13%  Similarity=0.086  Sum_probs=101.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-----------ccE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-----------CNK  229 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-----------~D~  229 (437)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.+.....+.++.++++|++|.++++++++.           .|+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            358999999999999999999999999999999866433333345788999999999999885543           489


Q ss_pred             EEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +|||||....          .+++.+++|+.|+..+++++.+..      .....+       +++..++....  .|..
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~~-------~iv~isS~~~~--~~~~  145 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAA------SDAAER-------RILHISSGAAR--NAYA  145 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHh------hccCCC-------EEEEEeChhhc--CCCC
Confidence            9999997532          145688999999999988885432      111000       23333332211  2322


Q ss_pred             ccchhhhhhhhcccchhhhhcc
Q 013761          300 YFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ....|+.+|...+.+......+
T Consensus       146 ~~~~Y~~sK~a~~~~~~~~~~~  167 (243)
T PRK07023        146 GWSVYCATKAALDHHARAVALD  167 (243)
T ss_pred             CchHHHHHHHHHHHHHHHHHhc
Confidence            3566888887776666544433

>PRK08264 short chain dehydrogenase; Validated

Probab=99.53  E-value=1.6e-13  Score=130.58  Aligned_cols=101  Identities=28%  Similarity=0.351  Sum_probs=84.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~A  234 (437)
                      +.+++++||||+|+||+++++.|+++|+ +|++++|+.+...  .....+.++.+|++|.++++++++.   +|+|||+|
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   81 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT--DLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNA   81 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh--hcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence            5678999999999999999999999999 9999999865321  1445788999999999999998875   69999999


Q ss_pred             cCCC-C---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          235 TARS-T---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       235 g~~~-~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |... .         .+.+.+++|+.++.++++++.+
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  118 (238)
T PRK08264         82 GIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAP  118 (238)
T ss_pred             CcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9822 1         1456799999999999999843

>PRK09186 flagellin modification protein A; Provisional

Probab=99.53  E-value=7.4e-14  Score=134.15  Aligned_cols=103  Identities=18%  Similarity=0.322  Sum_probs=82.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +.+|+++||||+|+||+++++.|+++|++|++++|+.+.  .....+     ...+.++.+|++|++++.++++.     
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999999999998652  111221     23466779999999999988875     


Q ss_pred             --ccEEEEeccCCCC------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARST------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|+|||||+....            .+...+++|+.+++++++++.+
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAK  130 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHH
Confidence              6999999975321            1456889999999998888744

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.7e-13  Score=132.13  Aligned_cols=103  Identities=19%  Similarity=0.260  Sum_probs=83.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-CCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-PRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      +.++++|||||+|+||++++++|+++|++|++++|+.+.  +..+.. ..++.++.+|++|++++.++++       ++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            678999999999999999999999999999999997652  111222 1256889999999999988876       469


Q ss_pred             EEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|||+||....          .+.+.+++|+.++.++++++.+
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  131 (264)
T PRK12829         89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVP  131 (264)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99999997621          1467899999999999998743

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.53  E-value=3.6e-13  Score=127.15  Aligned_cols=261  Identities=17%  Similarity=0.208  Sum_probs=187.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC--------CCCeEEEEecCCCHHHHHHHHhcc--
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML--------PRSVEIVLGDVGDPCTLKAAVENC--  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~--------~~~v~~v~~Dltd~~~v~~a~~~~--  227 (437)
                      .|.+||||-||.=|+.|++.|+.+||+|..+.|+.+.   ..++.+        +.......+|++|...+.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            3689999999999999999999999999999887652   122222        346788999999999999999876  


Q ss_pred             cEEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc--eeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          228 NKIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK--LAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       228 D~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk--l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      +-|+|+|+.....     ++-.-+|...|+.+|++|.+..+..  +.+..+..+  .-|.  +.   ..++-....|-.+
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstS--ElyG--kv---~e~PQsE~TPFyP  180 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTS--ELYG--KV---QEIPQSETTPFYP  180 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccH--hhcc--cc---cCCCcccCCCCCC
Confidence            8899999875432     4557788889999999999887742  333332210  0011  11   1122222345566


Q ss_pred             cchhhhhhhhcccchhhhhcccccceeeeeeeccCc------cce------ec------------ccc--CCCcccHHHH
Q 013761          301 FQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGG------YVE------LS------------KKL--SLPLGCTLDR  354 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G------~~~------i~------------~~~--~~p~g~v~D~  354 (437)
                      .++|+.+|..+-...+.+.+.|+.-.+.|.+|+.-.      |+.      +.            .++  ....|+..|-
T Consensus       181 RSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dY  260 (376)
T KOG1372|consen  181 RSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDY  260 (376)
T ss_pred             CChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHH
Confidence            788999998888888888888888888888888532      111      00            111  1244689999


Q ss_pred             HHHHHHHhcc-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC----Cc---------------eecccCCCcccCCCCC
Q 013761          355 YEGLVLSVGG-NGRSYVLILEAGPSADRSQSKLYFARFSTKVG----FC---------------RVRVPFSSFRPVKPDD  414 (437)
Q Consensus       355 ~~gi~l~~~~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G----~~---------------~v~iP~~~~r~~~~~~  414 (437)
                      ++++++.+.. ...-|+|.  ++.   ..|++||++.-....|    |.               .++|.-.-+||...+-
T Consensus       261 VEAMW~mLQ~d~PdDfViA--Tge---~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~  335 (376)
T KOG1372|consen  261 VEAMWLMLQQDSPDDFVIA--TGE---QHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDT  335 (376)
T ss_pred             HHHHHHHHhcCCCCceEEe--cCC---cccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhh
Confidence            9999999954 34567775  332   4589999988777666    44               4556667789988889


Q ss_pred             CCCCHHHHhhccceeecccC
Q 013761          415 PPMDPFLVHTMTIRFEPRRQ  434 (437)
Q Consensus       415 ~~ld~~ki~~~gi~fep~~~  434 (437)
                      ..-|.+|+++. ++|+|+.-
T Consensus       336 LqGdasKAk~~-LgW~pkv~  354 (376)
T KOG1372|consen  336 LQGDASKAKKT-LGWKPKVT  354 (376)
T ss_pred             hcCChHHHHHh-hCCCCccC
Confidence            99999999998 99999863

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.53  E-value=8.6e-14  Score=133.05  Aligned_cols=103  Identities=17%  Similarity=0.234  Sum_probs=83.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      |.++++|||||+|+||++++++|+++|++|++++|+.+.  ..   .......+.++.+|++|.++++++++       .
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999997652  11   12234568899999999999998886       3


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....         .++..+++|+.++.++++++.+
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLP  124 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            6999999996432         1456799999999999998853

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1e-13  Score=133.67  Aligned_cols=103  Identities=19%  Similarity=0.210  Sum_probs=85.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-H---HhhCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-V---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      |.++++|||||+|+||++++++|+++|++|++++|+.+.. .   ......++.++.+|++|.+++++++++       +
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            7789999999999999999999999999999999987531 1   122345788999999999999988874       5


Q ss_pred             cEEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||....        .++..+++|+.+++++++++.+
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (258)
T PRK08628         85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLP  126 (258)
T ss_pred             CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            999999996432        2456899999999999998843

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.53  E-value=3.7e-13  Score=128.69  Aligned_cols=101  Identities=17%  Similarity=0.206  Sum_probs=80.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      ++++|||||+|+||++++++|+++|++|++++++...   ..   +...+..+.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999888754331   11   12224467889999999999998887       35


Q ss_pred             cEEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||.....          +++.+++|+.++.++++++.+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK  125 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999999975321          346799999999999998844

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.53  E-value=2.2e-13  Score=130.43  Aligned_cols=100  Identities=17%  Similarity=0.147  Sum_probs=80.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +|++|||||+|+||+++++.|+++|++|++++|+.+.  ...   .....++.++.+|++|.++++++++.       +|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999998652  111   12245688999999999987776653       59


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|||+||.....         +++++.+|+.|+..+++++.
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~  121 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAAL  121 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            999999975321         34578899999999998874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.53  E-value=2.9e-13  Score=128.38  Aligned_cols=103  Identities=22%  Similarity=0.316  Sum_probs=84.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--H---HhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--V---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      |++|++|||||+|+||+++++.|+++|++|++++|+....  .   ......++.++.+|++|++++.+++++       
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999999999999986521  1   122345688999999999999888875       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+|||+||.....         +...+++|+.++.++++++.+
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALP  126 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            39999999875321         356789999999999998843

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.4e-13  Score=129.67  Aligned_cols=102  Identities=16%  Similarity=0.207  Sum_probs=83.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+.  ..   .+....++.++.+|++|.+++.++++.       +
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46799999999999999999999999999999998652  11   122245788999999999999888764       6


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||....         .++..+++|+.+++++++++.+
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  127 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLP  127 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            999999997432         2456799999999999998843

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.53  E-value=1e-13  Score=132.92  Aligned_cols=99  Identities=19%  Similarity=0.202  Sum_probs=84.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~VI  231 (437)
                      |.+|++|||||+|+||++++++|+++|++|++++|+.    ....+..+.++++|++|.+++.++++.       +|+||
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV   81 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6789999999999999999999999999999999975    122345688999999999999998875       59999


Q ss_pred             EeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          232 YCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       232 h~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||....         .+...+++|+.++.++++++..
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (252)
T PRK08220         82 NAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMP  120 (252)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            99997532         1456899999999999999843

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.53  E-value=5.2e-14  Score=136.41  Aligned_cols=100  Identities=18%  Similarity=0.310  Sum_probs=83.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      +|++|++|||||+|+||+++++.|+++|++|++++|+....    ....+.++.+|++|+++++++++.       +|+|
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG----QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc----ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            36789999999999999999999999999999999876531    123678899999999999988764       5999


Q ss_pred             EEeccCCCC------------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARST------------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~~------------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |||||....                  .+++++++|+.+++++++++.+
T Consensus        82 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (266)
T PRK06171         82 VNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVAR  130 (266)
T ss_pred             EECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHH
Confidence            999996421                  1456899999999999999854

>PRK06484 short chain dehydrogenase; Validated

Probab=99.52  E-value=8.1e-14  Score=148.22  Aligned_cols=146  Identities=15%  Similarity=0.173  Sum_probs=106.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      .+.+|++|||||+||||+++++.|+++|++|++++|+.+.  ...+.+...+..+.+|++|+++++++++.       +|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999999999998652  22333455677899999999999988864       59


Q ss_pred             EEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||....          .+++++++|+.|++++++++.      +.|..  .+       .++..++.......|+
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~------~~~~~--~g-------~iv~isS~~~~~~~~~  410 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAA------RLMSQ--GG-------VIVNLGSIASLLALPP  410 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHH------HHhcc--CC-------EEEEECchhhcCCCCC
Confidence            99999997521          156789999999999999994      44411  11       3444454443322232


Q ss_pred             cccchhhhhhhhcccchhhhhc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                        ...|+.+|.+...+......
T Consensus       411 --~~~Y~asKaal~~l~~~la~  430 (520)
T PRK06484        411 --RNAYCASKAAVTMLSRSLAC  430 (520)
T ss_pred             --CchhHHHHHHHHHHHHHHHH
Confidence              45688888777665544333

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.52  E-value=8.6e-14  Score=134.64  Aligned_cols=103  Identities=12%  Similarity=0.169  Sum_probs=84.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+++|+++||||+||||++++++|+++|++|++++|+..............++.+|++|.+++.+.+..+|+||||||..
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            46789999999999999999999999999999999986321111112223678899999999999998999999999974


Q ss_pred             CC------chhhHHHHHHHHHHHHHHHHH
Q 013761          238 ST------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       238 ~~------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ..      .+++.+++|+.|++++++++.
T Consensus        91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  119 (245)
T PRK12367         91 PGGRQDPENINKALEINALSSWRLLELFE  119 (245)
T ss_pred             CcCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            21      256789999999999999983

>PRK05855 short chain dehydrogenase; Validated

Probab=99.52  E-value=2.1e-13  Score=145.72  Aligned_cols=145  Identities=17%  Similarity=0.099  Sum_probs=103.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      .+.++++|||||+||||++++++|+++|++|++++|+.+.  +.   ....+.++.++.+|++|.+++.++++.      
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            3677899999999999999999999999999999998652  11   122245688999999999999988875      


Q ss_pred             -ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 -CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 -~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                       +|+||||||+...         .++.++++|+.|++++++++      ++.|.....+      .+++..+++......
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~------~~~~~~~~~~------g~iv~~sS~~~~~~~  459 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLF------GRQMVERGTG------GHIVNVASAAAYAPS  459 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHhcCCC------cEEEEECChhhccCC
Confidence             5999999998532         14568999999999999988      3333321100      134444444332222


Q ss_pred             cCcccchhhhhhhhcccchh
Q 013761          297 QGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~  316 (437)
                      |  ....|+.+|.+.+.+..
T Consensus       460 ~--~~~~Y~~sKaa~~~~~~  477 (582)
T PRK05855        460 R--SLPAYATSKAAVLMLSE  477 (582)
T ss_pred             C--CCcHHHHHHHHHHHHHH
Confidence            2  35567777776655443

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.2e-13  Score=129.85  Aligned_cols=101  Identities=29%  Similarity=0.344  Sum_probs=83.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~  233 (437)
                      +.+++++||||+|+||+++++.|+++|++|++++|+.+..  .....  .+.++.+|++|.+++.++++.   +|+||||
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET--GCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            6788999999999999999999999999999999986531  11111  367789999999999998874   6999999


Q ss_pred             ccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          234 ATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       234 Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||....         .+++.+++|+.+++++++++.+
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  121 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVAR  121 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            997432         1456788999999999998855

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.52  E-value=8.3e-14  Score=135.88  Aligned_cols=147  Identities=12%  Similarity=0.099  Sum_probs=101.2

Q ss_pred             CCCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhC---CCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKAD-QEVVDML---PRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      .|.+|+++||||++  |||++++++|+++|++|++.+|+.. .+..+++   ...+.++.+|++|+++++++++.     
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            36789999999985  9999999999999999999988742 1122222   23466789999999999988864     


Q ss_pred             --ccEEEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          227 --CNKIIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       227 --~D~VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                        +|+||||||+...              .++..+++|+.|++.+++++.      +.+..+  +       .++..++.
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~------~~~~~~--g-------~Iv~iss~  147 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACR------SMLNPG--S-------ALLTLSYL  147 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHH------HHhcCC--c-------EEEEEecC
Confidence              4999999996421              144678999999999999883      333211  1       24444443


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ......|.  ...|..+|.+...+......+
T Consensus       148 ~~~~~~~~--~~~Y~asKaal~~l~~~la~e  176 (262)
T PRK07984        148 GAERAIPN--YNVMGLAKASLEANVRYMANA  176 (262)
T ss_pred             CCCCCCCC--cchhHHHHHHHHHHHHHHHHH
Confidence            33222232  456777887766665444433

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.1e-13  Score=133.77  Aligned_cols=104  Identities=23%  Similarity=0.266  Sum_probs=84.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      .+.+++++||||+|+||++++++|+++|++|++++|+... +..   ......+.++.+|++|.++++++++.       
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999999999999999997642 111   11234678899999999999988874       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||.....         +++.+++|+.+++++++++.+
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLP  126 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            49999999974321         455799999999999998854

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.52  E-value=8.1e-14  Score=135.91  Aligned_cols=99  Identities=27%  Similarity=0.307  Sum_probs=80.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VIh~  233 (437)
                      +|++|||||+||||+++++.|+++|++|++++|+.+... ......+.++.+|++|.++++++++       .+|+||||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE-ALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            478999999999999999999999999999999865311 1112357788999999999988775       35999999


Q ss_pred             ccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          234 ATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       234 Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||....         .+++.+++|+.|+.++++++.
T Consensus        80 ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  115 (274)
T PRK05693         80 AGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF  115 (274)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            997432         145689999999999999983

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.52  E-value=9.7e-14  Score=132.15  Aligned_cols=104  Identities=18%  Similarity=0.256  Sum_probs=84.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      ++++++++||||+|+||+++++.|+++|+.|++.+|+.+.  ......+..+.++.+|++|.++++++++.       +|
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3568899999999999999999999999999988887552  22233345688999999999999887653       69


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||....         .+++.+++|+.++.++++++.+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (245)
T PRK12936         83 ILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTH  124 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence            99999997532         2466899999999999998743

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.52  E-value=5e-13  Score=129.42  Aligned_cols=100  Identities=18%  Similarity=0.207  Sum_probs=78.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH---HHHhhC---C-CCeEEEEecCCCHHHHHHHHh------
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ---EVVDML---P-RSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~---~~~~~~---~-~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      .+++|+||||+||||++++++|+++| ++|++++|+.+.   +..+++   . .++.++.+|++|.++++++++      
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            35799999999999999999999995 999999998653   111222   2 368899999999998776665      


Q ss_pred             cccEEEEeccCCCCc---h------hhHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARSTI---T------GDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---~------~~~~~vNv~gt~~l~~aa  259 (437)
                      .+|++|||||.....   +      .+.+++|+.+++++++++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l  129 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLL  129 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHH
Confidence            479999999985432   1      136899999999987776

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.3e-13  Score=134.14  Aligned_cols=103  Identities=22%  Similarity=0.212  Sum_probs=83.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+.  ..   .......+.++.+|++|+++++++++.       
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  11   112234678899999999999988865       


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....         .+.+.+++|+.|+.++++++.+
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  130 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYP  130 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4999999985321         1456789999999999999843

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.51  E-value=5.7e-13  Score=128.32  Aligned_cols=101  Identities=26%  Similarity=0.292  Sum_probs=82.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-CCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-PRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      ++++|||||+|+||+++++.|+++|++|++++|+.+.  .....+ ...+.++.+|+.|.+++.++++.       +|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5799999999999999999999999999999998653  122222 34688899999999999888875       6999


Q ss_pred             EEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||+||.....         +...+.+|+.+++++++++..
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLE  121 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            9999975321         345678999999999998843

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.9e-13  Score=130.31  Aligned_cols=104  Identities=17%  Similarity=0.263  Sum_probs=84.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +++++++||||+|+||+++++.|+++|++|+++.|+.+.   ..   ......++.++.+|++|.++++++++.      
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999988876542   11   122345788999999999999998874      


Q ss_pred             -ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 -CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 -~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       +|+||||||....         .+++.+++|+.++.++++++.+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  128 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARH  128 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHH
Confidence             6999999997532         14567999999999999988543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.51  E-value=7.2e-13  Score=125.87  Aligned_cols=104  Identities=24%  Similarity=0.342  Sum_probs=83.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +.+|++|||||+|+||+++++.|+++|++|+++.|+...   ..   .......+.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999888887542   11   11224568889999999999988876       


Q ss_pred             cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      .+|+|||+||.....         +.+.+.+|+.++.++++++.+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  128 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP  128 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            359999999974321         3567889999999999998653

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.51  E-value=3.1e-13  Score=123.65  Aligned_cols=129  Identities=29%  Similarity=0.383  Sum_probs=100.3

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCchhh
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITGD  243 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~  243 (437)
                      |+|+||||++|+.++++|+++|++|+++.|+.+...  . ..+++++.+|+.|++++.++++++|+||+++|....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~--~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE--D-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH--H-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc--c-ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            799999999999999999999999999999976422  2 678999999999999999999999999999976543    


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-------------------cchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          244 LFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-------------------SSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       244 ~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-------------------~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                          +...+.++++++++++++ +.+++...                   +...+...+.++..+++.++++||+.+++.
T Consensus        74 ----~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~  149 (183)
T PF13460_consen   74 ----DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGN  149 (183)
T ss_dssp             ----HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBT
T ss_pred             ----cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeC
Confidence                267788999999999986 44444211                   112233344555667777778888755443

...

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=1.2e-13  Score=134.30  Aligned_cols=142  Identities=11%  Similarity=0.073  Sum_probs=98.0

Q ss_pred             CCCCEEEEECC--CChHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhC---CCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDML---PRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGA--tG~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |++|+++||||  ++|||++++++|+++|++|++.+|... .+..+++   ......+++|++|.++++++++.      
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            67899999997  679999999999999999999877532 1122221   12345789999999999988864      


Q ss_pred             -ccEEEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 -CNKIIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 -~D~VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                       +|+||||||+...              .++..+++|+.+++++++++      ++.|.... +       .++..+++.
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~------~p~m~~~~-g-------~Iv~iss~~  149 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAA------RPMMRGRN-S-------AIVALSYLG  149 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHH------HHHhhhcC-c-------EEEEEcccc
Confidence             5999999998531              13457899999999999988      44443211 1       344444443


Q ss_pred             ceeeccCcccchhhhhhhhcccchh
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~  316 (437)
                      .....|+  ...|..+|.+...+..
T Consensus       150 ~~~~~~~--~~~Y~asKaal~~l~~  172 (261)
T PRK08690        150 AVRAIPN--YNVMGMAKASLEAGIR  172 (261)
T ss_pred             cccCCCC--cccchhHHHHHHHHHH
Confidence            3322332  4557777776655543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.51  E-value=1.8e-13  Score=132.34  Aligned_cols=102  Identities=15%  Similarity=0.225  Sum_probs=82.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---H---HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---V---VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ++.+|+++||||+|+||+++++.|+++|++|+++.|+....   .   +.....++.++.+|++|.+++.++++.     
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            37889999999999999999999999999999988864321   1   112245678899999999999888764     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                        +|+||||||.....         +++.+++|+.+++++++++
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~  127 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREA  127 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence              59999999974321         4568999999999888877

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.51  E-value=8.7e-13  Score=125.72  Aligned_cols=102  Identities=23%  Similarity=0.277  Sum_probs=82.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---H---HH---HhhCCCCeEEEEecCCCHHHHHHHHh----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---Q---EV---VDMLPRSVEIVLGDVGDPCTLKAAVE----  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~----  225 (437)
                      +++|+++||||+|+||+++++.|+++|++|++++|...   .   +.   .......+.++.+|++|.++++++++    
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999876432   1   11   11224468899999999999988875    


Q ss_pred             ---cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 ---NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                         .+|+||||||....         .+...+++|+.++.++++++.
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL  130 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               36999999997542         145689999999999999986

>PRK08324 short chain dehydrogenase; Validated

Probab=99.50  E-value=4.2e-13  Score=147.75  Aligned_cols=103  Identities=21%  Similarity=0.206  Sum_probs=85.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHh-------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      .+.+|++|||||+|+||+++++.|+++|++|++++|+.+.  .....+.  ..+.++.+|++|.++++++++       +
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999998753  1222232  378899999999999988876       4


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|+||||||.....         ++..+++|+.|+.++++++.
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  541 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAV  541 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            69999999975321         56789999999999988874

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.50  E-value=6.5e-13  Score=126.43  Aligned_cols=99  Identities=23%  Similarity=0.304  Sum_probs=80.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHh---hCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVD---MLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      .|+++||||+|+||+++++.|+++|++|++++|+..+.   ...   ....++.++.+|++|.+++.++++.       +
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999985421   111   1234688999999999999888764       5


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      |+||||||....         .++..+++|+.++.++++++
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  122 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPL  122 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            999999997532         14568999999999998877

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=2.2e-13  Score=132.22  Aligned_cols=146  Identities=16%  Similarity=0.133  Sum_probs=103.6

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc--H---HHHhhC-CCCeEEEEecCCCHHHHHHHHhc----
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD--Q---EVVDML-PRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~--~---~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      +.+|+++||||+  +|||++++++|+++|++|++++|+..  +   +..+.+ ..++.++++|++|+++++++++.    
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            678999999997  89999999999999999999987532  1   122223 34678899999999999888764    


Q ss_pred             ---ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          227 ---CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                         +|++|||||+...             .+...+++|+.+++++++++      ++.|...  +       +++..+++
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------~~~~~~~--g-------~Iv~isS~  149 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREA------KKLMTEG--G-------SIVTLTYL  149 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHH------HHhcccC--c-------eEEEEccc
Confidence               4999999997421             14557899999999999998      4444321  1       35555554


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ......|  ....|+.+|.+...+......+
T Consensus       150 ~~~~~~~--~~~~Y~asKaal~~l~~~la~e  178 (257)
T PRK08594        150 GGERVVQ--NYNVMGVAKASLEASVKYLAND  178 (257)
T ss_pred             CCccCCC--CCchhHHHHHHHHHHHHHHHHH
Confidence            4332223  2456788887766665444333

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.50  E-value=5.5e-13  Score=137.84  Aligned_cols=101  Identities=20%  Similarity=0.305  Sum_probs=84.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +++|+++||||+||||++++++|+++|++|++++|+.+..  ........+..+.+|++|.+++.+.+.++|+||||||.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            5789999999999999999999999999999999976531  11112234678899999999999999999999999997


Q ss_pred             CCC------chhhHHHHHHHHHHHHHHHH
Q 013761          237 RST------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       237 ~~~------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      ...      .+++.+++|+.|+.++++++
T Consensus       256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~  284 (406)
T PRK07424        256 NVHGERTPEAINKSYEVNTFSAWRLMELF  284 (406)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            532      24678999999999999999

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.50  E-value=2.3e-13  Score=130.08  Aligned_cols=103  Identities=21%  Similarity=0.251  Sum_probs=80.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHh---hCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |.+|+++||||+|+||++++++|+++|++|++..+....   +..+   .....+.++.+|++|.+++.++++.      
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999886543221   1122   2234677889999999999888764      


Q ss_pred             -ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 -CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 -~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                       +|+||||||....         .+++++++|+.+++++++++.+
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  125 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVID  125 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence             6999999997532         1567899999999998888743

>PRK09242 tropinone reductase; Provisional

Probab=99.50  E-value=1.4e-13  Score=132.68  Aligned_cols=103  Identities=20%  Similarity=0.264  Sum_probs=83.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---C--CCCeEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---L--PRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~--~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      ++.+|+++||||+|+||+++++.|+++|++|++++|+.+.  +..+.   .  ...+.++.+|++|.++++++++.    
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998652  11111   1  34678899999999998887764    


Q ss_pred             ---ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          227 ---CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                         +|+||||||....         .+++.+.+|+.+++++++++.
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  131 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAH  131 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence               4999999997421         145689999999999999983

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.4e-13  Score=135.69  Aligned_cols=102  Identities=20%  Similarity=0.113  Sum_probs=81.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc------------HHH---HhhCCCCeEEEEecCCCHHHHHH
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD------------QEV---VDMLPRSVEIVLGDVGDPCTLKA  222 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~------------~~~---~~~~~~~v~~v~~Dltd~~~v~~  222 (437)
                      .|.+|+++||||++|||++++++|++.|++|++++|+..            .+.   +...+..+.++++|++|++++++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            367899999999999999999999999999999999731            111   12223457789999999999998


Q ss_pred             HHhc-------ccEEEEec-cCC------CC-------chhhHHHHHHHHHHHHHHHH
Q 013761          223 AVEN-------CNKIIYCA-TAR------ST-------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       223 a~~~-------~D~VIh~A-g~~------~~-------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      +++.       +|++|||| |..      ..       .+.+.+++|+.+++.+++++
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  142 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFA  142 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHH
Confidence            8764       49999999 742      11       14567899999999999998

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2e-13  Score=132.79  Aligned_cols=98  Identities=21%  Similarity=0.194  Sum_probs=80.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      |+|+||||+|+||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.+++.++++       .+|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999997652  11   12224578889999999999988876       4699


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                      ||||||.....         +++.+++|+.++.++++++
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  119 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF  119 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence            99999975421         4557899999999998887

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.50  E-value=1.8e-13  Score=131.95  Aligned_cols=101  Identities=16%  Similarity=0.244  Sum_probs=81.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC----C-CCeEEEEecCCCHHHHHHHHhc-------
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML----P-RSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~----~-~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +|+||||||+|+||++++++|+++|++|++++|+...  .....+    + ..+.++.+|++|.+++.++++.       
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6799999999999999999999999999999997652  111111    1 3688999999999999888764       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||.....         +++.+++|+.|++++++++.+
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSR  125 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            49999999964321         456889999999999988854

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.50  E-value=5.3e-13  Score=125.59  Aligned_cols=99  Identities=20%  Similarity=0.201  Sum_probs=78.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~Ag  235 (437)
                      ++|++|||||+|+||+++++.|+++ ++|++++|+.+. +........+.++.+|++|.++++++++.   +|+|||+||
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            4579999999999999999999999 999999998653 11111123578899999999999999974   799999999


Q ss_pred             CCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          236 ARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       236 ~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                      .....         +.+.+.+|+.+..++++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  113 (227)
T PRK08219         81 VADLGPVAESTVDEWRATLEVNVVAPAELTRLL  113 (227)
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            75321         4557899999977766665

>PRK12743 oxidoreductase; Provisional

Probab=99.50  E-value=2.5e-13  Score=131.17  Aligned_cols=102  Identities=19%  Similarity=0.216  Sum_probs=82.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      ++|++|||||+|+||++++++|+++|++|++++++...   ..   ....+..+.++.+|++|.++++++++.       
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36799999999999999999999999999998765432   11   122345788999999999998888764       


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....         .+++.+.+|+.++.++++++.+
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAAR  124 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            5999999997532         1456899999999999998854

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.50  E-value=1.7e-13  Score=133.07  Aligned_cols=146  Identities=14%  Similarity=0.146  Sum_probs=101.1

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc----HHHHhhC---CCCeEEEEecCCCHHHHHHHHhc---
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD----QEVVDML---PRSVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~----~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      +++|+++||||+  ++||++++++|+++|++|++.+|+.+    .+..+++   ...+.++++|++|+++++++++.   
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            678999999986  89999999999999999998876432    1112222   23467889999999999988864   


Q ss_pred             ----ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCC
Q 013761          227 ----CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADS  289 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ss  289 (437)
                          +|+||||||+...             .|++.+++|+.|++++++++      ++.|...  +       +++..++
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~------~~~m~~~--g-------~Iv~isS  148 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAA------KPLMSEG--G-------SIVTLTY  148 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHH------HHHHhhC--C-------eEEEEec
Confidence                4999999997521             14678999999999999998      4444321  1       3444444


Q ss_pred             CcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          290 LNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       290 l~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +......|  ....|+.+|.+...+......+
T Consensus       149 ~~~~~~~~--~~~~Y~asKaal~~l~~~la~e  178 (258)
T PRK07370        149 LGGVRAIP--NYNVMGVAKAALEASVRYLAAE  178 (258)
T ss_pred             cccccCCc--ccchhhHHHHHHHHHHHHHHHH
Confidence            33322222  2456777777766555443333

>PRK12742 oxidoreductase; Provisional

Probab=99.49  E-value=2e-13  Score=129.56  Aligned_cols=102  Identities=17%  Similarity=0.258  Sum_probs=81.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKII  231 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VI  231 (437)
                      .+++|+||||||+|+||+++++.|+++|++|+++.++..+.   .....  .+.++.+|++|.+++.++++.   +|+||
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET--GATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh--CCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            36789999999999999999999999999999887654321   11222  356788999999998888764   69999


Q ss_pred             EeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          232 YCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       232 h~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||....         .+++.+++|+.|++++++++.+
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  119 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAAR  119 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            99997431         1567899999999999987744

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.49  E-value=5.7e-13  Score=126.51  Aligned_cols=103  Identities=21%  Similarity=0.275  Sum_probs=84.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      +++++++||||+|+||++++++|+++|++|++++|+.+.  ...+.+.  ..+.++.+|++|.+++.++++       .+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999998652  1222222  468899999999999988887       46


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+|||+||.....         +.+.+++|+.+++++++++.+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVP  126 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence            9999999875321         356799999999999999854

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.49  E-value=7.4e-13  Score=128.00  Aligned_cols=101  Identities=21%  Similarity=0.250  Sum_probs=82.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      ++++|||||+|+||+++++.|+++|++|++++|+...  ..   +...+..+.++.+|++|.+++.++++       .+|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998542  11   12234568889999999999988887       469


Q ss_pred             EEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||.....          +.+.+++|+.+++++++++.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  123 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP  123 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            999999974321          345699999999999999843

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=1.9e-13  Score=133.94  Aligned_cols=102  Identities=12%  Similarity=0.076  Sum_probs=81.3

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc-HHHH----hhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD-QEVV----DMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~----~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      |.+|++|||||+  +|||++++++|+++|++|++++|+.. .+..    ++++ ...++++|++|+++++++++.     
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhc
Confidence            567999999997  89999999999999999999888632 1111    2222 356789999999999988764     


Q ss_pred             --ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|+||||||+...             .+++.+++|+.+++++++++..
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  136 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEK  136 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence              4999999997531             1567899999999999999843

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=1.6e-13  Score=130.26  Aligned_cols=100  Identities=20%  Similarity=0.254  Sum_probs=80.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCH-HHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDP-CTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~-~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++++|+++||||+|+||++++++|+++|++|++++|+....    ...++.++.+|++|+ +.+.+.+..+|+||||||.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~   77 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI   77 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence            36789999999999999999999999999999999975431    234688999999998 4444444567999999996


Q ss_pred             CCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          237 RST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       237 ~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ...          .+++.+++|+.|++++++++.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  112 (235)
T PRK06550         78 LDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLP  112 (235)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            421          1456899999999999999854

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.49  E-value=5.7e-13  Score=127.09  Aligned_cols=209  Identities=19%  Similarity=0.186  Sum_probs=133.7

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCchh
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTITG  242 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~  242 (437)
                      |+||||||.+|+.+++.|++.|++|.++.|+........+ ..+++++.+|+.|.+++.++++++|+||++-+.....  
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~--   78 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPS--   78 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCC--
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhh--
Confidence            7999999999999999999999999999999864332222 2367888999999999999999999999988754311  


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCceeeeec----C-C----c-----chhhhhhhhhccCCCCcceeeccCcccchhhhhh
Q 013761          243 DLFRVDYQGVYNVTKAFQDFNNKLAQLRA----G-K----S-----SKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFK  308 (437)
Q Consensus       243 ~~~~vNv~gt~~l~~aa~~~gvkl~~l~~----~-~----~-----g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk  308 (437)
                           .+....++++|++++||+....+.    . .    .     ...|..+++.+.+.++++++++|+.|++.+....
T Consensus        79 -----~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~  153 (233)
T PF05368_consen   79 -----ELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPF  153 (233)
T ss_dssp             -----HHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTT
T ss_pred             -----hhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhh
Confidence                 234456899999999998443331    1 0    1     1345566788888899999999997765543211


Q ss_pred             hhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhccC--C-cEEEEEccCCCCCCCCcHH
Q 013761          309 YDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGN--G-RSYVLILEAGPSADRSQSK  385 (437)
Q Consensus       309 ~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~--G-e~y~l~l~~~~~~~~~s~~  385 (437)
                      ..     ......   ......+..++..     ...+. ....|+.+.....+..+  . ....+.+..+    .+|++
T Consensus       154 ~~-----~~~~~~---~~~~~~~~~~~~~-----~~~~~-~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~----~~t~~  215 (233)
T PF05368_consen  154 AP-----VVDIKK---SKDVVTLPGPGNQ-----KAVPV-TDTRDVGRAVAAILLDPEKHNNGKTIFLAGE----TLTYN  215 (233)
T ss_dssp             HH-----TTCSCC---TSSEEEEETTSTS-----EEEEE-EHHHHHHHHHHHHHHSGGGTTEEEEEEEGGG----EEEHH
T ss_pred             cc-----cccccc---cceEEEEccCCCc-----ccccc-ccHHHHHHHHHHHHcChHHhcCCEEEEeCCC----CCCHH
Confidence            11     000000   0001122222210     00011 24678888777776322  1 2233433322    47899


Q ss_pred             HHHHHHHhhhCC
Q 013761          386 LYFARFSTKVGF  397 (437)
Q Consensus       386 e~~~~i~~~~G~  397 (437)
                      |+++.+.+.+|.
T Consensus       216 eia~~~s~~~G~  227 (233)
T PF05368_consen  216 EIAAILSKVLGK  227 (233)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHCC
Confidence            999999999994

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.7e-13  Score=130.37  Aligned_cols=154  Identities=19%  Similarity=0.164  Sum_probs=105.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      ++.+|+++||||+|+||+++++.|+++|++|++++|+.+.  ....   ....++.++.+|+++.+++.++++.      
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4778999999999999999999999999999999998652  1111   2234688999999999999988874      


Q ss_pred             -ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCc--chhhhhhhhhccCCCCccee
Q 013761          227 -CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKS--SKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 -~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~--g~sk~~~~k~v~~ssl~~~i  294 (437)
                       +|+||||||....         .++.++++|+.+++++++++..      .+.....  +... ...+++..++.... 
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~g~iv~~sS~~~~-  157 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK------RMIARAKGAGNTK-PGGRIINIASVAGL-  157 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHH------HHHhcCCcCCCCC-CCeEEEEECccccc-
Confidence             6999999996432         2556899999999999998843      2211100  0000 00134443433222 


Q ss_pred             eccCcccchhhhhhhhcccchhhhhc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                       .+......|+.+|...+........
T Consensus       158 -~~~~~~~~Y~~sK~a~~~~~~~la~  182 (258)
T PRK06949        158 -RVLPQIGLYCMSKAAVVHMTRAMAL  182 (258)
T ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHH
Confidence             2222356788888776665544333

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.5e-13  Score=132.48  Aligned_cols=100  Identities=20%  Similarity=0.166  Sum_probs=81.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++++|+||||+|+||.+++++|+++|++|++++|+...  .....+.  ..++++|++|+++++++++.       +|+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            678999999999999999999999999999999997652  1222232  26789999999999988874       599


Q ss_pred             EEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHH
Q 013761          230 IIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       230 VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||||||....           .+++.+++|+.|++++++++.
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAAL  124 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHH
Confidence            9999997431           145689999999999998874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=3.1e-13  Score=131.38  Aligned_cols=146  Identities=10%  Similarity=0.081  Sum_probs=100.7

Q ss_pred             CCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhC---CCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKAD-QEVVDML---PRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +++|+++||||++  |||++++++|+++|++|++.+|+.. .+..+.+   .....++++|++|+++++++++.      
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6789999999997  9999999999999999999988742 1112211   12234678999999999988864      


Q ss_pred             -ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          227 -CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       227 -~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                       +|+||||||....             .|++.+++|+.+++.+++++      ++.|...  |       +++..++...
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~------~~~m~~~--G-------~Iv~isS~~~  150 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSA------EALMHDG--G-------SIVTLTYYGA  150 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHH------HhhhccC--c-------eEEEEecCcc
Confidence             4999999997421             15668999999999999998      4444321  1       3444444333


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ....|  ....|+.+|.+...+......+
T Consensus       151 ~~~~~--~~~~Y~asKaal~~l~~~la~e  177 (260)
T PRK06603        151 EKVIP--NYNVMGVAKAALEASVKYLAND  177 (260)
T ss_pred             ccCCC--cccchhhHHHHHHHHHHHHHHH
Confidence            22223  2456777777766555443333

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.49  E-value=1.4e-13  Score=133.21  Aligned_cols=169  Identities=18%  Similarity=0.163  Sum_probs=101.1

Q ss_pred             EECCCChHHHHHHHHHHHCCC--eEEEEecCCcH----HHH-h-------------hCCCCeEEEEecCCCH------HH
Q 013761          166 VVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ----EVV-D-------------MLPRSVEIVLGDVGDP------CT  219 (437)
Q Consensus       166 VTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~----~~~-~-------------~~~~~v~~v~~Dltd~------~~  219 (437)
                      |||||||||++|+++|++.+.  +|+++.|..+.    +.+ +             ....+++++.+|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999886  99999998642    111 1             0156899999999974      56


Q ss_pred             HHHHHhcccEEEEeccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecCCcchhhhh-h-hhhccCCCCccee
Q 013761          220 LKAAVENCNKIIYCATARSTI--TGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAGKSSKSKLL-L-AKFKSADSLNGWE  294 (437)
Q Consensus       220 v~~a~~~~D~VIh~Ag~~~~~--~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~~~g~sk~~-~-~k~v~~ssl~~~i  294 (437)
                      ...+.+.+|+|||||+.....  ..+..++|+.|+.++++.|.+... ++.++++......... . ++...+..  ...
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~--~~~  158 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEE--DDL  158 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH----EE
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCccccccccccc--ccc
Confidence            777888999999999986543  466899999999999999985443 5667765211111100 0 00000000  011


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGG  336 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G  336 (437)
                      ..+..+.+.|..+|+.+|........+.+.++..-|+...+|
T Consensus       159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence            123335678999999999998877777677766666665554

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.9e-13  Score=130.28  Aligned_cols=101  Identities=20%  Similarity=0.323  Sum_probs=82.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+.  ...   ...+..+.++.+|++|+++++++++.       +|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            4799999999999999999999999999999998652  111   12235788999999999999888764       59


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||....         .|++.+++|+.|++++++++.+
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  122 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGK  122 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            99999985321         1566899999999999999843

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.49  E-value=3.9e-13  Score=129.94  Aligned_cols=102  Identities=17%  Similarity=0.187  Sum_probs=84.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHhc---ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVEN---CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~~---~D~  229 (437)
                      +.+|+++||||+|+||+++++.|+++|++|++++|+.+.  .....    ....+.++.+|++|+++++++++.   +|+
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            578999999999999999999999999999999998652  11111    234678899999999999888864   699


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||||||....         .++..+++|+.+++++++++.
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  124 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAY  124 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            9999997432         156689999999999999883

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2e-13  Score=129.73  Aligned_cols=138  Identities=17%  Similarity=0.155  Sum_probs=99.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHh----cccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~Ag  235 (437)
                      |+++||||+|+||+++++.|+++|++|++++|+.+..  ..+.+  .+.++++|++|.++++++++    .+|+||||||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            3699999999999999999999999999999986531  11222  46788999999999998886    4699999998


Q ss_pred             CCC--------------CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          236 ARS--------------TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       236 ~~~--------------~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      ...              ..+++.+++|+.+++++++++      ++.|...  +       +++..++..    .|  ..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~------~~~~~~~--g-------~Iv~isS~~----~~--~~  137 (223)
T PRK05884         79 PSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSV------GDHLRSG--G-------SIISVVPEN----PP--AG  137 (223)
T ss_pred             ccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHH------HHHhhcC--C-------eEEEEecCC----CC--Cc
Confidence            421              125678999999999999999      4444321  1       344444432    12  23


Q ss_pred             chhhhhhhhcccchhhhhccc
Q 013761          302 QDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ..|..+|.+...+......++
T Consensus       138 ~~Y~asKaal~~~~~~la~e~  158 (223)
T PRK05884        138 SAEAAIKAALSNWTAGQAAVF  158 (223)
T ss_pred             cccHHHHHHHHHHHHHHHHHh
Confidence            568888887766665444443

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.48  E-value=4.9e-13  Score=129.06  Aligned_cols=104  Identities=14%  Similarity=0.221  Sum_probs=82.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--H----HHHh---hCCCCeEEEEecCCCHHHHHHHHhc---
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--Q----EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~----~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      +++|++|||||+|+||+++++.|+++|++|++++++..  .    ...+   ..+.++.++++|++|+++++++++.   
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999877765432  1    1111   1234688899999999999988874   


Q ss_pred             ----ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 ----CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                          +|+||||||....         .+++.+++|+.+++++++++.+.
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  134 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH  134 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence                5999999997321         15568999999999999998653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.48  E-value=2.3e-13  Score=136.80  Aligned_cols=189  Identities=19%  Similarity=0.191  Sum_probs=116.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCC--HHHHHHHH---hc-
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGD--PCTLKAAV---EN-  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd--~~~v~~a~---~~-  226 (437)
                      .+++++||||+||||++++++|+++|++|++++|+.+.  +..+++     ..++..+.+|+++  .+.++++.   .+ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999998762  111221     2357788999985  34444333   33 


Q ss_pred             -ccEEEEeccCCCC---c--------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 -CNKIIYCATARST---I--------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 -~D~VIh~Ag~~~~---~--------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                       +|+||||||+...   .        +++.+++|+.|+.++++++      ++.|.....+       .++..++.....
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------lp~m~~~~~g-------~IV~iSS~a~~~  198 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAV------LPGMLKRKKG-------AIINIGSGAAIV  198 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHH------HHHHHhcCCc-------EEEEEechhhcc
Confidence             4599999997531   1        3458999999999999998      4444322222       355555544322


Q ss_pred             eccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG  364 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~  364 (437)
                      ..+......|+.+|.+..........+.   +.   .+.++.+.++..... ...+..+  ..+++++.++..++.
T Consensus       199 ~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-~~~~~~~--~p~~~A~~~~~~~~~  271 (320)
T PLN02780        199 IPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-RSSFLVP--SSDGYARAALRWVGY  271 (320)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-CCCCCCC--CHHHHHHHHHHHhCC
Confidence            1111235678889888776654443333   22   233333333321100 0011111  356778888877753

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.8e-13  Score=128.34  Aligned_cols=147  Identities=22%  Similarity=0.285  Sum_probs=101.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhc-----ccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-----CNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-----~D~VIh~A  234 (437)
                      +|+++||||+|+||++++++|+++|++|++++|+.+. +..... ..+.++.+|++|.++++++++.     +|+|||||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQAL-PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhc-cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcC
Confidence            3689999999999999999999999999999998763 222222 3577889999999999888873     69999999


Q ss_pred             cCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce-eeccCcccc
Q 013761          235 TARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW-EVRQGTYFQ  302 (437)
Q Consensus       235 g~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~-i~rP~~~~~  302 (437)
                      |+...           .+...+.+|+.+++++++++.+.      +... .+       .++..++.... ...+.....
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~-~~-------~iv~~ss~~g~~~~~~~~~~~  145 (225)
T PRK08177         80 GISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQ------VRPG-QG-------VLAFMSSQLGSVELPDGGEMP  145 (225)
T ss_pred             cccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHh------hhhc-CC-------EEEEEccCccccccCCCCCcc
Confidence            97532           13457889999999999998442      2111 00       12222222111 112222345


Q ss_pred             hhhhhhhhcccchhhhhccc
Q 013761          303 DVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|+.+|.+.+.+......++
T Consensus       146 ~Y~~sK~a~~~~~~~l~~e~  165 (225)
T PRK08177        146 LYKASKAALNSMTRSFVAEL  165 (225)
T ss_pred             chHHHHHHHHHHHHHHHHHh
Confidence            68888888877765554444

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.47  E-value=3.5e-13  Score=129.19  Aligned_cols=163  Identities=18%  Similarity=0.190  Sum_probs=105.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---C-CCCeEEEEecCC--CHHHHHHHHh-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---L-PRSVEIVLGDVG--DPCTLKAAVE-----  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~-~~~v~~v~~Dlt--d~~~v~~a~~-----  225 (437)
                      +.+|+++||||+|+||.+++++|++.|++|++++|+.+.  ....+   . ...+.++.+|++  +.+++.++++     
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999998652  11111   1 235677888886  6666655544     


Q ss_pred             --cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 --NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                        .+|+||||||....          .+++.+++|+.|++++++++.+      .|.....       ..++..++....
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~------~l~~~~~-------~~iv~~ss~~~~  156 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLP------LLLKSPA-------ASLVFTSSSVGR  156 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH------HHHhCCC-------CEEEEEccHhhc
Confidence              35999999987422          1466899999999999998843      2221111       022222322221


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCc
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGG  336 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G  336 (437)
                      ...+  ....|+.+|.+.+........++....+.....++++
T Consensus       157 ~~~~--~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~  197 (247)
T PRK08945        157 QGRA--NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGG  197 (247)
T ss_pred             CCCC--CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCC
Confidence            1112  3456888887777665544444433333344455554

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=4.1e-13  Score=129.87  Aligned_cols=144  Identities=12%  Similarity=0.018  Sum_probs=98.9

Q ss_pred             CCCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCC----------cH---H---HHhhCCCCeEEEEecCCCHHH
Q 013761          158 GAQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKA----------DQ---E---VVDMLPRSVEIVLGDVGDPCT  219 (437)
Q Consensus       158 ~l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~----------~~---~---~~~~~~~~v~~v~~Dltd~~~  219 (437)
                      .+.+|+++||||+|  +||++++++|+++|++|++++|..          ..   +   .....+..+.++.+|++|.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            37889999999994  999999999999999999875421          11   1   112224567889999999999


Q ss_pred             HHHHHhc-------ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhh
Q 013761          220 LKAAVEN-------CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAK  283 (437)
Q Consensus       220 v~~a~~~-------~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k  283 (437)
                      ++++++.       +|+||||||.....         +++.+++|+.|++.+.+++.      +.|.....+       +
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------~~~~~~~~g-------~  149 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFA------RGFDKKSGG-------R  149 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH------HHHhhcCCe-------E
Confidence            9888864       49999999974321         45689999999999988873      333221111       3


Q ss_pred             hccCCCCcceeeccCcccchhhhhhhhcccchh
Q 013761          284 FKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       284 ~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~  316 (437)
                      ++..++....  .|......|+.+|.+...+..
T Consensus       150 iv~isS~~~~--~~~~~~~~Y~~sK~a~~~l~~  180 (256)
T PRK12859        150 IINMTSGQFQ--GPMVGELAYAATKGAIDALTS  180 (256)
T ss_pred             EEEEcccccC--CCCCCchHHHHHHHHHHHHHH
Confidence            4444443322  222235678888877665543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.47  E-value=4.1e-13  Score=130.00  Aligned_cols=148  Identities=22%  Similarity=0.221  Sum_probs=102.6

Q ss_pred             CCCCEEEEECCCC-hHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CC-CCeEEEEecCCCHHHHHHHHhc----
Q 013761          159 AQNTTVLVVGATS-RIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LP-RSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG-~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~-~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      +.+++++||||+| +||+++++.|+++|++|++++|+.+.  ...+.    .+ ..+.++++|++|.++++++++.    
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999997 89999999999999999999987652  11111    22 3678899999999999888864    


Q ss_pred             ---ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcce
Q 013761          227 ---CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~  293 (437)
                         +|+||||||....         .+.+.+++|+.+++++++++.+      .|.... .+       .++..++....
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~~g-------~iv~~ss~~~~  161 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALR------YMRARGHGG-------VIVNNASVLGW  161 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHhcCCCc-------EEEEeCchhhc
Confidence               5999999997431         2566899999999999999843      332211 11       23333332222


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhcc
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                        .+......|+.+|.+.+.+......+
T Consensus       162 --~~~~~~~~Y~~sKaal~~~~~~la~e  187 (262)
T PRK07831        162 --RAQHGQAHYAAAKAGVMALTRCSALE  187 (262)
T ss_pred             --CCCCCCcchHHHHHHHHHHHHHHHHH
Confidence              22223456888888776665544433

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.47  E-value=4.1e-13  Score=130.19  Aligned_cols=101  Identities=17%  Similarity=0.162  Sum_probs=82.3

Q ss_pred             CCCCEEEEECC--CChHHHHHHHHHHHCCCeEEEEecCCcH----HHHhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKADQ----EVVDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGA--tG~IG~~la~~Ll~~G~~V~~~~R~~~~----~~~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +.+|+++||||  ++|||++++++|+++|++|++++|+...    +....+...+.++.+|++|+++++++++.      
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999  8999999999999999999999986421    12223444677899999999999888754      


Q ss_pred             -ccEEEEeccCCCC----------c---hhhHHHHHHHHHHHHHHHH
Q 013761          227 -CNKIIYCATARST----------I---TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 -~D~VIh~Ag~~~~----------~---~~~~~~vNv~gt~~l~~aa  259 (437)
                       +|+||||||+...          .   +.+.+++|+.|++++++++
T Consensus        85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~  131 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKAL  131 (256)
T ss_pred             CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence             5999999997521          1   3457999999999999999

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=4.5e-13  Score=129.27  Aligned_cols=103  Identities=17%  Similarity=0.222  Sum_probs=82.2

Q ss_pred             CCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCC-----------cHH--H---HhhCCCCeEEEEecCCCHHHH
Q 013761          159 AQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKA-----------DQE--V---VDMLPRSVEIVLGDVGDPCTL  220 (437)
Q Consensus       159 l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~-----------~~~--~---~~~~~~~v~~v~~Dltd~~~v  220 (437)
                      +++|+||||||+|  +||.+++++|+++|++|++++|+.           ...  .   ....+..+.++.+|++|.+++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5788999999995  899999999999999999999872           110  1   112244688999999999998


Q ss_pred             HHHHhc-------ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          221 KAAVEN-------CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       221 ~~a~~~-------~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      .++++.       +|+||||||.....         ++..+++|+.|+.++++++.+
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  139 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAK  139 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            887764       59999999974321         355799999999999999854

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.47  E-value=4.8e-13  Score=127.59  Aligned_cols=150  Identities=17%  Similarity=0.170  Sum_probs=100.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC----CCCeEEEEecCCC--HHHHHHHH-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML----PRSVEIVLGDVGD--PCTLKAAV-----  224 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~----~~~v~~v~~Dltd--~~~v~~a~-----  224 (437)
                      +|.+|+++||||+|+||+++++.|+++|++|++++|+.+.  ...+.+    ...+.++.+|++|  .+++.+++     
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998752  111111    2356788899976  34454443     


Q ss_pred             ---hcccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          225 ---ENCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       225 ---~~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                         ..+|+||||||....          .+.+.+++|+.|++++++++.+      .+.....+       +++..++..
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~------~~~~~~~~-------~iv~~ss~~  149 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFP------LLKQSPDA-------SVIFVGESH  149 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHH------HHHhCCCC-------EEEEEeccc
Confidence               246999999996421          1345799999999999999843      33211111       233333322


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ..  .|......|+.+|.+.+.+......+.
T Consensus       150 ~~--~~~~~~~~Y~~sKaa~~~~~~~la~e~  178 (239)
T PRK08703        150 GE--TPKAYWGGFGASKAALNYLCKVAADEW  178 (239)
T ss_pred             cc--cCCCCccchHHhHHHHHHHHHHHHHHh
Confidence            22  233345679999988777665444443

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.5e-13  Score=131.85  Aligned_cols=104  Identities=22%  Similarity=0.277  Sum_probs=84.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+.   ..   ......++.++.+|++|.+++.++++.     
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999997542   11   111234678899999999999888764     


Q ss_pred             --ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|+||||||....          .+.+.+++|+.+++++++++.+
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~  169 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP  169 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence              5999999997421          1456899999999999999955

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.47  E-value=4.8e-13  Score=131.14  Aligned_cols=101  Identities=20%  Similarity=0.240  Sum_probs=82.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHhc------cc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN------CN  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~------~D  228 (437)
                      ++|+++|||| ||||++++++|+ +|++|++++|+.+.  +..+.   ....+.++.+|++|.+++.++++.      +|
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            4679999998 799999999996 89999999997642  12222   234678899999999999888863      69


Q ss_pred             EEEEeccCCC--CchhhHHHHHHHHHHHHHHHHHhc
Q 013761          229 KIIYCATARS--TITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       229 ~VIh~Ag~~~--~~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +||||||+..  ..+++++++|+.|++++++++.+.
T Consensus        79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  114 (275)
T PRK06940         79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKV  114 (275)
T ss_pred             EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHH
Confidence            9999999854  247789999999999999998553

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.47  E-value=2.1e-13  Score=122.45  Aligned_cols=135  Identities=27%  Similarity=0.301  Sum_probs=97.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CeEEEEecC--Cc--HHH---HhhCCCCeEEEEecCCCHHHHHHHHhcc------
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRK--AD--QEV---VDMLPRSVEIVLGDVGDPCTLKAAVENC------  227 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~--~~--~~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~~------  227 (437)
                      |+++||||+++||++++++|+++| +.|+++.|+  .+  .+.   +.....++.++++|+++.++++++++.+      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999999999996 477888887  22  112   2223568899999999999999888753      


Q ss_pred             -cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          228 -NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       228 -D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                       |+||||||.....         +.+++++|+.+++.+.+++...+          .       ..++..+++......|
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~----------~-------g~iv~~sS~~~~~~~~  143 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG----------G-------GKIVNISSIAGVRGSP  143 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT----------T-------EEEEEEEEGGGTSSST
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheecc----------c-------cceEEecchhhccCCC
Confidence             9999999986532         45789999999999999995511          1       1344444443332223


Q ss_pred             Ccccchhhhhhhhcccch
Q 013761          298 GTYFQDVVAFKYDAGMDA  315 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~  315 (437)
                        ....|..+|.+...+.
T Consensus       144 --~~~~Y~askaal~~~~  159 (167)
T PF00106_consen  144 --GMSAYSASKAALRGLT  159 (167)
T ss_dssp             --TBHHHHHHHHHHHHHH
T ss_pred             --CChhHHHHHHHHHHHH
Confidence              3556777777655444

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=5.3e-13  Score=127.03  Aligned_cols=103  Identities=19%  Similarity=0.187  Sum_probs=84.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +++|++|||||+|+||+++++.|+++|++|+++ +|+.+.  ....   .....+.++.+|++|++++.++++       
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            678899999999999999999999999999998 887542  1111   223468899999999999988876       


Q ss_pred             cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          226 NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      .+|+|||+||.....         +++.+++|+.++.++++++.+
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP  127 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            579999999975321         456899999999999998854

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.47  E-value=4.5e-13  Score=130.31  Aligned_cols=145  Identities=10%  Similarity=0.043  Sum_probs=101.0

Q ss_pred             CCCCEEEEECC--CChHHHHHHHHHHHCCCeEEEEecCCc-HHH----HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKAD-QEV----VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGA--tG~IG~~la~~Ll~~G~~V~~~~R~~~-~~~----~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      |++|+++||||  +++||++++++|+++|++|++++|... .+.    .+..+ ...++.+|++|+++++++++.     
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHh
Confidence            67899999996  689999999999999999999876422 111    12222 234688999999999988864     


Q ss_pred             --ccEEEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          227 --CNKIIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       227 --~D~VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                        +|++|||||....              .|+..+++|+.+++++++++      ++.|...  +       +++..+++
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~------lp~m~~~--g-------~Ii~iss~  147 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAA------LPMLSDD--A-------SLLTLSYL  147 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHH------HHhcCCC--c-------eEEEEecc
Confidence              4999999997421              14558999999999999999      5555321  1       34554544


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ......|  ....|..+|.+...+......+
T Consensus       148 ~~~~~~~--~~~~Y~asKaal~~l~~~la~e  176 (260)
T PRK06997        148 GAERVVP--NYNTMGLAKASLEASVRYLAVS  176 (260)
T ss_pred             ccccCCC--CcchHHHHHHHHHHHHHHHHHH
Confidence            4322223  2456888887766655443333

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.46  E-value=1.4e-12  Score=124.40  Aligned_cols=101  Identities=18%  Similarity=0.215  Sum_probs=79.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhcc-------
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVENC-------  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~~-------  227 (437)
                      ++++|||||+|+||++++++|+++|++|+++ .|+.+.  +.   ....+..+.++.+|++|+++++++++.+       
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            3689999999999999999999999999875 454432  11   1222446888999999999999988754       


Q ss_pred             cEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||....          .++..+++|+.+++++++++.+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  124 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK  124 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            899999997422          1346899999999999988743

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.46  E-value=4e-13  Score=146.82  Aligned_cols=191  Identities=19%  Similarity=0.177  Sum_probs=123.6

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ..+.+|+++||||+||||++++++|+++|++|++++|+.+.  +..+   .....+.++.+|++|.++++++++      
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            35788999999999999999999999999999999998652  1111   224568899999999999998887      


Q ss_pred             -cccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 -NCNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                       .+|+||||||....           .++..+++|+.|++++++++      ++.|.....+       .++..++....
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~  513 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGL------LPHMRERRFG-------HVVNVSSIGVQ  513 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHH------HHhhhhcCCC-------EEEEECChhhc
Confidence             36999999996421           24568999999999999998      4444322111       34444444332


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccceecccc-CCCcccHHHHHHHHHHHhcc
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVELSKKL-SLPLGCTLDRYEGLVLSVGG  364 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~i~~~~-~~p~g~v~D~~~gi~l~~~~  364 (437)
                      ...|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++.-..  ...+ ..+....+++++.++..+..
T Consensus       514 ~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~--~~~~~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        514 TNAP--RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP--TKRYNNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             CCCC--CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc--cccccCCCCCCHHHHHHHHHHHHHh
Confidence            2222  35668888887766654433332   22   23333333321100  0011 01112467888888877643

>PRK06484 short chain dehydrogenase; Validated

Probab=99.46  E-value=4.6e-13  Score=142.46  Aligned_cols=103  Identities=24%  Similarity=0.318  Sum_probs=85.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+.  +....+...+.++.+|++|+++++++++.       +|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            467899999999999999999999999999999998653  23344455778899999999999888764       599


Q ss_pred             EEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||+...           .+++.+++|+.+++++++++..
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALR  125 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            9999997321           1567899999999999999844

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.46  E-value=6.6e-13  Score=125.82  Aligned_cols=95  Identities=25%  Similarity=0.304  Sum_probs=79.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh------cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE------NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~------~~D~VIh~  233 (437)
                      .+|+++||||+|+||+++++.|+++|++|++++|+.+..    .  ...++.+|++|.++++++++      ++|+||||
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----F--PGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            468999999999999999999999999999999986531    1  23578999999999988887      46999999


Q ss_pred             ccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          234 ATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       234 Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||.....         +.+.+++|+.++.++++++.
T Consensus        76 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  111 (234)
T PRK07577         76 VGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL  111 (234)
T ss_pred             CCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            9975431         45689999999999988874

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.46  E-value=1.5e-12  Score=143.23  Aligned_cols=103  Identities=18%  Similarity=0.162  Sum_probs=83.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHh-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      .|.+|++|||||+||||++++++|+++|++|++++|+.+.  .....+     ...+..+.+|++|.+++.++++     
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3778999999999999999999999999999999998652  111111     2357789999999999998887     


Q ss_pred             --cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          226 --NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                        ++|+||||||.....         ++..+++|+.+++++++++.
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al  536 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAF  536 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence              469999999975321         45689999999999887773

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.45  E-value=2.1e-12  Score=119.99  Aligned_cols=127  Identities=20%  Similarity=0.164  Sum_probs=91.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEEeccCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIYCATARS  238 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh~Ag~~~  238 (437)
                      |+++||||+|+||++++++|+++ ++|++++|+..            .+++|++|.++++++++   ++|+||||||...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            47999999999999999999999 99999998642            36799999999999887   4699999999743


Q ss_pred             C---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhh
Q 013761          239 T---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKY  309 (437)
Q Consensus       239 ~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~  309 (437)
                      .         .+.+.+++|+.++.++++++.+      .|...  +       .++..+++...  .|......|..+|.
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~--g-------~iv~iss~~~~--~~~~~~~~Y~~sK~  130 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQH------YLNDG--G-------SFTLTSGILSD--EPIPGGASAATVNG  130 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHH------HHhcC--C-------eEEEEcccccC--CCCCCchHHHHHHH
Confidence            2         1556799999999999999843      33211  1       23333333322  22223456777777


Q ss_pred             hcccchhhh
Q 013761          310 DAGMDAKFE  318 (437)
Q Consensus       310 a~~~~~~~~  318 (437)
                      +...+....
T Consensus       131 a~~~~~~~l  139 (199)
T PRK07578        131 ALEGFVKAA  139 (199)
T ss_pred             HHHHHHHHH
Confidence            766555433

>TIGR02415 23BDH acetoin reductases

Probab=99.45  E-value=7e-13  Score=127.20  Aligned_cols=100  Identities=18%  Similarity=0.235  Sum_probs=80.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |+++||||+|+||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|++++.++++.       +|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            579999999999999999999999999999997542  11   122244688999999999999888764       499


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||....         .+++.+++|+.+++.+++++.+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAAR  121 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            9999997432         1456899999999999888743

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.45  E-value=1e-12  Score=122.78  Aligned_cols=246  Identities=14%  Similarity=0.097  Sum_probs=162.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC---eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc--cEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY---SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC--NKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh~Ag  235 (437)
                      +|+|||||++|.+|++|.+.+...|.   +.+.....                .+||++.++++++|+..  ..|||+|+
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------d~DLt~~a~t~~lF~~ekPthVIhlAA   64 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------DADLTNLADTRALFESEKPTHVIHLAA   64 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------cccccchHHHHHHHhccCCceeeehHh
Confidence            36999999999999999999998875   22222211                37999999999999865  89999999


Q ss_pred             CCCCc------hhhHHHHHHHHHHHHHHHHHhcCCc-ee-eeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhh
Q 013761          236 ARSTI------TGDLFRVDYQGVYNVTKAFQDFNNK-LA-QLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAF  307 (437)
Q Consensus       236 ~~~~~------~~~~~~vNv~gt~~l~~aa~~~gvk-l~-~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~s  307 (437)
                      ..+..      ..++++.|+.-.-|++..|-++|++ +. .++.--+.. +.  ...+.++.+..-...|.  -..|..+
T Consensus        65 mVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPd-kt--~yPIdEtmvh~gpphps--N~gYsyA  139 (315)
T KOG1431|consen   65 MVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPD-KT--SYPIDETMVHNGPPHPS--NFGYSYA  139 (315)
T ss_pred             hhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCC-CC--CCCCCHHHhccCCCCCC--chHHHHH
Confidence            76543      4578999999999999999999985 32 222211110 00  01122222211112232  1235556


Q ss_pred             hhhcccchhhhhcccccceeeeeeeccCccce-------------ecc----------ccC-----CCc---ccHHHHHH
Q 013761          308 KYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-------------LSK----------KLS-----LPL---GCTLDRYE  356 (437)
Q Consensus       308 k~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-------------i~~----------~~~-----~p~---g~v~D~~~  356 (437)
                      |.........+..+++....++...+.||.-.             +.+          .+.     -|+   -|++|.++
T Consensus       140 Kr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~  219 (315)
T KOG1431|consen  140 KRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLAD  219 (315)
T ss_pred             HHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHH
Confidence            64444444677777776655555555555100             000          000     011   18999999


Q ss_pred             HHHHHhccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhcccee
Q 013761          357 GLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRF  429 (437)
Q Consensus       357 gi~l~~~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~f  429 (437)
                      .++-.+....+...|+++.+. .+..|++|.++.+.++.++ .-++-+..-.++++.....+.+|+++++..|
T Consensus       220 l~i~vlr~Y~~vEpiils~ge-~~EVtI~e~aeaV~ea~~F-~G~l~~DttK~DGq~kKtasnsKL~sl~pd~  290 (315)
T KOG1431|consen  220 LFIWVLREYEGVEPIILSVGE-SDEVTIREAAEAVVEAVDF-TGKLVWDTTKSDGQFKKTASNSKLRSLLPDF  290 (315)
T ss_pred             HHHHHHHhhcCccceEeccCc-cceeEHHHHHHHHHHHhCC-CceEEeeccCCCCCcccccchHHHHHhCCCc
Confidence            999988655444556666663 4468999999999999986 4577788888888888899999999975443

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.45  E-value=8.3e-13  Score=126.38  Aligned_cols=100  Identities=22%  Similarity=0.298  Sum_probs=78.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      +|+||||||+||||+++++.|+++|++|+++.++..+   ..   +.....++.++.+|++|.++++++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999887654331   11   11223468899999999999888775       36


Q ss_pred             cEEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHH
Q 013761          228 NKIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       228 D~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |+||||||.....          +...+++|+.+++++++++.
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAA  124 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence            9999999974321          34579999999999987763

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.45  E-value=6.1e-13  Score=128.67  Aligned_cols=146  Identities=16%  Similarity=0.049  Sum_probs=97.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      |++|||||+|+||++++++|+++|++|++++|+.+.  +..+.+  ...+.++.+|++|.++++++++.       +|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            489999999999999999999999999999998652  122222  23678899999999999888863       5999


Q ss_pred             EEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeec-CCcchhhhhhhhhccCCCCcceeeccC
Q 013761          231 IYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRA-GKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       231 Ih~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~-~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |||||....           .+.+.+.+|+.+++.+++++      ++.+.. ...+       .++..++....  .|.
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------l~~~~~~~~~g-------~iv~isS~~~~--~~~  145 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLL------IQAWLEKKMKG-------VLVYLSSVSVK--EPM  145 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHH------HHHHHhcCCCC-------EEEEEeCcccC--CCC
Confidence            999997421           13446788999998888776      222211 1111       24444443322  222


Q ss_pred             cccchhhhhhhhcccchhhhhccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .....|..+|.+...+......++
T Consensus       146 ~~~~~y~~sKaa~~~~~~~la~e~  169 (259)
T PRK08340        146 PPLVLADVTRAGLVQLAKGVSRTY  169 (259)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHh
Confidence            234567777776655554433333

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.45  E-value=4.2e-13  Score=134.27  Aligned_cols=102  Identities=20%  Similarity=0.225  Sum_probs=82.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhC---CCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDML---PRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      ++++++||||++|||+++++.|+++| ++|++++|+.+.  +..+.+   ...+.++.+|++|.++++++++.       
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 999999998652  122222   24577889999999999887753       


Q ss_pred             ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||+...          .++..+++|+.|++++++++.+
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~  126 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLD  126 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            6999999997421          1456899999999999888744

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.44  E-value=1.7e-13  Score=128.33  Aligned_cols=140  Identities=21%  Similarity=0.212  Sum_probs=106.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHH---hhC--CCCeEEEEecCCCHHHHHHHHhcc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVV---DML--PRSVEIVLGDVGDPCTLKAAVENC-----  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~---~~~--~~~v~~v~~Dltd~~~v~~a~~~~-----  227 (437)
                      +.||.++|||+.||||++++++|+++|..+.+++.+.+. +..   +..  ...+.|+++||++..+++++|+.+     
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            679999999999999999999999999988777766652 222   222  347899999999999999999864     


Q ss_pred             --cEEEEeccCCCC-chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          228 --NKIIYCATARST-ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       228 --D~VIh~Ag~~~~-~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                        |++||+||+..+ .|++++.+|+.|..+-+..+      +++|.....|.  ..  -+++-+|+.+  +.|...+.-|
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~a------lpyMdk~~gG~--GG--iIvNmsSv~G--L~P~p~~pVY  150 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLA------LPYMDKKQGGK--GG--IIVNMSSVAG--LDPMPVFPVY  150 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhh------hhhhhhhcCCC--Cc--EEEEeccccc--cCccccchhh
Confidence              999999999754 58999999999999999999      88887654321  11  2566666544  3444344456


Q ss_pred             hhhhhh
Q 013761          305 VAFKYD  310 (437)
Q Consensus       305 ~~sk~a  310 (437)
                      ..+|..
T Consensus       151 ~AsKaG  156 (261)
T KOG4169|consen  151 AASKAG  156 (261)
T ss_pred             hhcccc
Confidence            665543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=3.1e-13  Score=135.13  Aligned_cols=102  Identities=24%  Similarity=0.321  Sum_probs=86.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhcc---
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVENC---  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~~---  227 (437)
                      ++.+++++||||++|||.++|+.|+.+|++|++..|+.+.  +..+.+     ...+.++++|++|.++|+++.+.+   
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999752  222221     346888999999999999988764   


Q ss_pred             ----cEEEEeccCCCCc-------hhhHHHHHHHHHHHHHHHH
Q 013761          228 ----NKIIYCATARSTI-------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       228 ----D~VIh~Ag~~~~~-------~~~~~~vNv~gt~~l~~aa  259 (437)
                          |++|||||+....       .+..+.||+.|++.|++.+
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lL  154 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELL  154 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHH
Confidence                9999999987543       4678999999999999998

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1e-12  Score=126.62  Aligned_cols=104  Identities=17%  Similarity=0.225  Sum_probs=84.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcHH--H---HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQE--V---VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~~--~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      .+++|+++||||+|+||++++++|+++|++ |++++|+.+..  .   +...+..+.++.+|++|++++.++++.     
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999 99999975421  1   122345678899999999999888764     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|+||||||.....         ++..+++|+.+++++++++.+
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  128 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK  128 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence              59999999975321         356799999999999998844

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.44  E-value=8.3e-13  Score=129.71  Aligned_cols=103  Identities=20%  Similarity=0.259  Sum_probs=82.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC------CCCeEEEEecCCCHHHHHHHHhc---
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML------PRSVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~------~~~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      .|.+|+++||||+.|||+++|++|++.|++|++.+|+.+.  +....+      +..+..+.+|+++.++++++++.   
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999998773  222211      24588999999999887776653   


Q ss_pred             -----ccEEEEeccCCCCc----------hhhHHHHHHHH-HHHHHHHHH
Q 013761          227 -----CNKIIYCATARSTI----------TGDLFRVDYQG-VYNVTKAFQ  260 (437)
Q Consensus       227 -----~D~VIh~Ag~~~~~----------~~~~~~vNv~g-t~~l~~aa~  260 (437)
                           +|++|||||.....          |+.++++|+.| .+.+.+++.
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~  134 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAAR  134 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHH
Confidence                 59999999975422          67899999995 667777773

>PRK05599 hypothetical protein; Provisional

Probab=99.43  E-value=1e-12  Score=126.57  Aligned_cols=141  Identities=18%  Similarity=0.188  Sum_probs=98.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CC-CCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LP-RSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~-~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      |+++||||++|||++++++|+ +|++|++++|+.+.  +..++   .. ..+.++.+|++|.++++++++.       +|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 69999999998652  12122   22 2478899999999999887754       49


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      ++|||||.....         +.+++++|+.+..++++++      ++.|.... .+       .++..++.......|+
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------~~~m~~~~~~g-------~Iv~isS~~~~~~~~~  146 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL------ADELRAQTAPA-------AIVAFSSIAGWRARRA  146 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH------HHHHHhcCCCC-------EEEEEeccccccCCcC
Confidence            999999975321         2346789999999888877      44443221 11       3555555544433333


Q ss_pred             cccchhhhhhhhcccchhhh
Q 013761          299 TYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~  318 (437)
                        ...|..+|.+...+....
T Consensus       147 --~~~Y~asKaa~~~~~~~l  164 (246)
T PRK05599        147 --NYVYGSTKAGLDAFCQGL  164 (246)
T ss_pred             --CcchhhHHHHHHHHHHHH
Confidence              456888887766555433

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.43  E-value=1.3e-12  Score=127.10  Aligned_cols=151  Identities=20%  Similarity=0.202  Sum_probs=95.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC----CCCeEEEEecCCCHHHH----HHHHh-----
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML----PRSVEIVLGDVGDPCTL----KAAVE-----  225 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~----~~~v~~v~~Dltd~~~v----~~a~~-----  225 (437)
                      ++++||||+||||++++++|+++|++|++++|+..+   ...+.+    +..+.++.+|++|.+++    +++++     
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            479999999999999999999999999998765431   112222    23567789999998755    33332     


Q ss_pred             --cccEEEEeccCCCC--------------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhh
Q 013761          226 --NCNKIIYCATARST--------------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAK  283 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~--------------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k  283 (437)
                        .+|+||||||....                    .+.+.+++|+.+++++++++.....+     ......+..  ..
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~~~~~~~~~--~~  154 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAG-----TRAEQRSTN--LS  154 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhh-----cccccCCCC--eE
Confidence              36999999996421                    13457999999999999998443211     000000000  02


Q ss_pred             hccCCCCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          284 FKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       284 ~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ++..++....  .|......|+.+|.+.+.+......+
T Consensus       155 iv~~~s~~~~--~~~~~~~~Y~asK~a~~~~~~~la~e  190 (267)
T TIGR02685       155 IVNLCDAMTD--QPLLGFTMYTMAKHALEGLTRSAALE  190 (267)
T ss_pred             EEEehhhhcc--CCCcccchhHHHHHHHHHHHHHHHHH
Confidence            3333332221  23334567888888877666544443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08017 oxidoreductase; Provisional

Probab=99.42  E-value=3.2e-12  Score=122.78  Aligned_cols=97  Identities=25%  Similarity=0.312  Sum_probs=76.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhc--------ccEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVEN--------CNKII  231 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--------~D~VI  231 (437)
                      .++++||||+|+||+++++.|+++|++|++++|+.+. +....  ..+.++.+|++|.+++.++++.        +|.+|
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS--LGFTGILLDLDDPESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh--CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            3689999999999999999999999999999998653 11222  2478899999999988776653        48999


Q ss_pred             EeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          232 YCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       232 h~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                      |+||.....         +++.+++|+.|+.++++.+
T Consensus        80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~  116 (256)
T PRK08017         80 NNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLL  116 (256)
T ss_pred             ECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            999964321         4568999999999876555

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.42  E-value=6.3e-13  Score=122.73  Aligned_cols=108  Identities=19%  Similarity=0.212  Sum_probs=87.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcc-------cEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENC-------NKI  230 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~-------D~V  230 (437)
                      +.|-+||||||++|||++|+++|.+.|-+|++++|+.+. +.....-..+....||+.|.++.+++++..       ++|
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            567899999999999999999999999999999999763 122223346777889999999888887653       999


Q ss_pred             EEeccCCCCc-----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC
Q 013761          231 IYCATARSTI-----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG  272 (437)
Q Consensus       231 Ih~Ag~~~~~-----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~  272 (437)
                      |||||+....           .++-+++|+.++.+|+.++      ++++..+
T Consensus        83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~------lphl~~q  129 (245)
T COG3967          83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALL------LPHLLRQ  129 (245)
T ss_pred             eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHH------HHHHHhC
Confidence            9999985421           2457899999999999999      5555443

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.8e-12  Score=123.78  Aligned_cols=141  Identities=9%  Similarity=0.015  Sum_probs=99.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh--------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE--------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~--------  225 (437)
                      +.+|+++||||+++||++++++|+++|++|++++|+.+.  +.   .......+..+.+|++|.++++++++        
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999999999999999998652  11   22224467788999999999987764        


Q ss_pred             cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCccee
Q 013761          226 NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i  294 (437)
                      .+|++|||||....          .+.+.+++|+.+++.+++++      ++.|.... .|       .++..+++..  
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~m~~~~~~g-------~Iv~isS~~~--  147 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVA------AERMRKRNKKG-------VIVNVISHDD--  147 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHhcCCCc-------eEEEEecCCC--
Confidence            46999999985321          13457888999999998887      44443221 11       2444444321  


Q ss_pred             eccCcccchhhhhhhhcccchhh
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~  317 (437)
                       .|  ....|..+|.+...+...
T Consensus       148 -~~--~~~~Y~asKaal~~~~~~  167 (227)
T PRK08862        148 -HQ--DLTGVESSNALVSGFTHS  167 (227)
T ss_pred             -CC--CcchhHHHHHHHHHHHHH
Confidence             22  245677887776555433

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.41  E-value=5.8e-12  Score=119.27  Aligned_cols=98  Identities=29%  Similarity=0.339  Sum_probs=79.8

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      +||||++|+||++++++|+++|++|++++|+...   ..   .......+.++.+|++|.+++++++++       +|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999987531   11   122234578999999999999988865       4999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||+||....         .+++.+++|+.++.++++++.+
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLR  120 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            999997532         1456899999999999998865

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.41  E-value=1.1e-12  Score=126.86  Aligned_cols=143  Identities=16%  Similarity=0.130  Sum_probs=98.3

Q ss_pred             EEEEECCCChHHHHHHHHHHH----CCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhcc----
Q 013761          163 TVLVVGATSRIGRIVIRKLML----RGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVENC----  227 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~----~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~~----  227 (437)
                      +++||||++|||++++++|++    .|++|++++|+.+.  +..+.+     ...+.++.+|++|.++++++++.+    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    79999999998652  122221     236788999999999998887642    


Q ss_pred             -------cEEEEeccCCCC------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCC
Q 013761          228 -------NKIIYCATARST------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSAD  288 (437)
Q Consensus       228 -------D~VIh~Ag~~~~------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~s  288 (437)
                             |+||||||....            .+++.+++|+.|++.+++++      ++.|......     ...++..+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~------~~~l~~~~~~-----~~~iv~is  150 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSV------LKAFKDSPGL-----NRTVVNIS  150 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHH------HHHHhhcCCC-----CCEEEEEC
Confidence                   589999996321            13468999999999999988      4443321000     01344444


Q ss_pred             CCcceeeccCcccchhhhhhhhcccchhhh
Q 013761          289 SLNGWEVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       289 sl~~~i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                      ++......|  ....|+.+|.+...+....
T Consensus       151 S~~~~~~~~--~~~~Y~asKaal~~l~~~l  178 (256)
T TIGR01500       151 SLCAIQPFK--GWALYCAGKAARDMLFQVL  178 (256)
T ss_pred             CHHhCCCCC--CchHHHHHHHHHHHHHHHH
Confidence            443322223  3566888888776665443

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.41  E-value=1.9e-12  Score=126.16  Aligned_cols=99  Identities=23%  Similarity=0.211  Sum_probs=79.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCC-CeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPR-SVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~-~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.  ...+.   ... .+.++.+|++|+++++++++.       +|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999999999999997652  11111   222 345678999999998887765       59


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +||||||.....         ++..+++|+.|++++++++.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  121 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFV  121 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            999999974321         45689999999999999984

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.41  E-value=8.2e-13  Score=126.64  Aligned_cols=146  Identities=13%  Similarity=0.119  Sum_probs=99.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHhhCCCCeEEEEecCCCHHHHHHHHhcc----------
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDMLPRSVEIVLGDVGDPCTLKAAVENC----------  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~~----------  227 (437)
                      +|+++||||+|+||++++++|+++|++|++++|+..+.   ..+.....+.++.+|++|.++++++++.+          
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            36899999999999999999999999999999986321   12223457889999999999999888753          


Q ss_pred             -cEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          228 -NKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       228 -D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                       +++|||||....          .+.+.+++|+.+++.+++++.+      .+......      .+++..++...  ..
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~------~~~~~~~~------~~iv~~sS~~~--~~  146 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMK------HTKDWKVD------KRVINISSGAA--KN  146 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHH------HHhccCCC------ceEEEecchhh--cC
Confidence             179999997432          1456789999999999988743      22211000      02333333222  12


Q ss_pred             cCcccchhhhhhhhcccchhhhhc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                      |......|+.+|.+.+.+......
T Consensus       147 ~~~~~~~Y~~sKaa~~~~~~~la~  170 (251)
T PRK06924        147 PYFGWSAYCSSKAGLDMFTQTVAT  170 (251)
T ss_pred             CCCCcHHHhHHHHHHHHHHHHHHH
Confidence            222356788888877666644433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=5.8e-12  Score=120.29  Aligned_cols=102  Identities=18%  Similarity=0.257  Sum_probs=82.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.++++|||||+|+||+++++.|+++|++|++++|+.+.  ...   ...+.++.++.+|++|.++++++++.       
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            568899999999999999999999999999999998642  111   22345788899999999998877764       


Q ss_pred             ccEEEEeccCCCC------------------chhhHHHHHHHHHHHHHHHHH
Q 013761          227 CNKIIYCATARST------------------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ~D~VIh~Ag~~~~------------------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|+||||||....                  .+..++++|+.|++++++++.
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  134 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAA  134 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            5999999996321                  134578999999999988773

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.41  E-value=8.9e-12  Score=134.38  Aligned_cols=112  Identities=16%  Similarity=0.242  Sum_probs=86.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEecCCcH----HHH-hhC---------------------CCCeEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY---SVKALVRKADQ----EVV-DML---------------------PRSVEI  209 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~---~V~~~~R~~~~----~~~-~~~---------------------~~~v~~  209 (437)
                      +.+|+|||||||||||.+|+++|++.+.   +|+++.|....    +.+ +++                     ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            6789999999999999999999998763   68999996531    111 010                     236888


Q ss_pred             EEecCCCH------HHHHHHHhcccEEEEeccCCCCc--hhhHHHHHHHHHHHHHHHHHhcC-Cc-eeeee
Q 013761          210 VLGDVGDP------CTLKAAVENCNKIIYCATARSTI--TGDLFRVDYQGVYNVTKAFQDFN-NK-LAQLR  270 (437)
Q Consensus       210 v~~Dltd~------~~v~~a~~~~D~VIh~Ag~~~~~--~~~~~~vNv~gt~~l~~aa~~~g-vk-l~~l~  270 (437)
                      +.+|++++      +..+.+.+++|+|||+|+.....  .+..+++|+.|+.+++++|++.+ .+ +.+.+
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vS  267 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVS  267 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEcc
Confidence            99999987      45667778899999999986533  56789999999999999998864 33 44444

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.41  E-value=5.4e-12  Score=119.92  Aligned_cols=95  Identities=22%  Similarity=0.301  Sum_probs=75.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEEeccC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIYCATA  236 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh~Ag~  236 (437)
                      |+|+||||+||||++++++|+++|  +.|++..|+....   .....+.++++|++|.++++++.+   ++|+||||||.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            589999999999999999999985  6666666654321   113467889999999998887655   46999999998


Q ss_pred             CCC---------------chhhHHHHHHHHHHHHHHHH
Q 013761          237 RST---------------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       237 ~~~---------------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      ...               .+...+.+|+.+++.+++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  115 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHF  115 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            531               03457999999999999999

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.40  E-value=1.5e-12  Score=130.01  Aligned_cols=147  Identities=12%  Similarity=0.107  Sum_probs=98.7

Q ss_pred             CCCCEEEEECC--CChHHHHHHHHHHHCCCeEEEEecCCcH--HH---Hh--------hCC-C----CeEEEEecC--CC
Q 013761          159 AQNTTVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VD--------MLP-R----SVEIVLGDV--GD  216 (437)
Q Consensus       159 l~~k~vLVTGA--tG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~--------~~~-~----~v~~v~~Dl--td  216 (437)
                      |++|++|||||  ++|||+++++.|++.|++|++ +|..+.  ..   ..        ... .    ...++.+|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            78999999999  899999999999999999998 554331  00   10        011 1    146788898  43


Q ss_pred             HH------------------HHHHHHhc-------ccEEEEeccCCC----C-------chhhHHHHHHHHHHHHHHHHH
Q 013761          217 PC------------------TLKAAVEN-------CNKIIYCATARS----T-------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       217 ~~------------------~v~~a~~~-------~D~VIh~Ag~~~----~-------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ++                  +++++++.       +|+||||||...    +       .|++.+++|+.+++++++++ 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~-  164 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF-  164 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH-
Confidence            33                  66666653       599999997532    1       15678999999999999999 


Q ss_pred             hcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          261 DFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       261 ~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                           ++.|...  |       ++++.+++......|. +...|..+|.+...+......+.
T Consensus       165 -----~p~m~~~--G-------~II~isS~a~~~~~p~-~~~~Y~asKaAl~~l~~~la~El  211 (303)
T PLN02730        165 -----GPIMNPG--G-------ASISLTYIASERIIPG-YGGGMSSAKAALESDTRVLAFEA  211 (303)
T ss_pred             -----HHHHhcC--C-------EEEEEechhhcCCCCC-CchhhHHHHHHHHHHHHHHHHHh
Confidence                 5555432  2       4555555443333332 22368888887776665444443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.40  E-value=2.8e-12  Score=121.85  Aligned_cols=99  Identities=24%  Similarity=0.315  Sum_probs=78.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HH---hhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      |++|||||+|+||++++++|+++|++|+++.|+....   ..   .....++.++.+|++|++++.++++.       +|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            5899999999999999999999999999998833221   11   11235688999999999998887764       59


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +||||||....         .+.+.+++|+.++..+++++.
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  121 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI  121 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99999997532         145678999999999887763

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.39  E-value=8.8e-12  Score=117.94  Aligned_cols=95  Identities=23%  Similarity=0.333  Sum_probs=78.4

Q ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhc---ccEEEEeccCC
Q 013761          165 LVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVEN---CNKIIYCATAR  237 (437)
Q Consensus       165 LVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~Ag~~  237 (437)
                      |||||+|+||++++++|+++|++|++++|+.+.  .....+  ..++.++.+|++|.+++.++++.   +|+|||+||..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            699999999999999999999999999998542  111222  34688999999999999999986   59999999974


Q ss_pred             CC---------chhhHHHHHHHHHHHHHHHH
Q 013761          238 ST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       238 ~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      ..         .+++++++|+.++++++++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  111 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAA  111 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhh
Confidence            32         14668999999999999955

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.39  E-value=2.6e-12  Score=122.22  Aligned_cols=96  Identities=22%  Similarity=0.318  Sum_probs=78.1

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      |+||||+||||.++++.|+++|++|++++|+.+.   ...   ...+.++.++.+|++|.+++.++++.       +|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999876432   111   22345688999999999999888764       4999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      |||||....         .++..+++|+.+++++++++
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  118 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPC  118 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            999997432         15668999999999999876

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.37  E-value=2.5e-11  Score=117.36  Aligned_cols=210  Identities=22%  Similarity=0.252  Sum_probs=142.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT  241 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~  241 (437)
                      ++||||||||++|++++++|+++|++|+++.|+.+......  ..+.+..+|+.+.+.+..+++++|.++++.+... ..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~   77 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS   77 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence            47999999999999999999999999999999977422212  7899999999999999999999999999988765 22


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCc----eeeeecC-----CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          242 GDLFRVDYQGVYNVTKAFQDFNNK----LAQLRAG-----KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       242 ~~~~~vNv~gt~~l~~aa~~~gvk----l~~l~~~-----~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                      ............+..+++. .+++    ++.+...     .+...+...+..+..+++++++++|..++.......    
T Consensus        78 ~~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~----  152 (275)
T COG0702          78 DAFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF----  152 (275)
T ss_pred             cchhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCCccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH----
Confidence            2345555666666666654 2232    3333322     234567778889999999999999776654433221    


Q ss_pred             cchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHHH
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYFA  389 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~~  389 (437)
                         .......+.+...    ..-+      .+  .....+|.++.+...+..   .++.|.+...     +..++.+.++
T Consensus       153 ---~~~~~~~~~~~~~----~~~~------~~--~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~-----~~~~~~~~~~  212 (275)
T COG0702         153 ---IEAAEAAGLPVIP----RGIG------RL--SPIAVDDVAEALAAALDAPATAGRTYELAGP-----EALTLAELAS  212 (275)
T ss_pred             ---HHHHHhhCCceec----CCCC------ce--eeeEHHHHHHHHHHHhcCCcccCcEEEccCC-----ceecHHHHHH
Confidence               0011111111000    0000      01  112478888888888753   5788888432     2467899999


Q ss_pred             HHHhhhCCce
Q 013761          390 RFSTKVGFCR  399 (437)
Q Consensus       390 ~i~~~~G~~~  399 (437)
                      .+....|.+.
T Consensus       213 ~l~~~~gr~~  222 (275)
T COG0702         213 GLDYTIGRPV  222 (275)
T ss_pred             HHHHHhCCcc
Confidence            9999988543

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.37  E-value=3e-12  Score=125.43  Aligned_cols=142  Identities=22%  Similarity=0.274  Sum_probs=104.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H-HHhhC-CCCeEEEEecCCCHHHHHHHHhcc-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E-VVDML-PRSVEIVLGDVGDPCTLKAAVENC-------  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~-~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~-------  227 (437)
                      ....|.|+|||+-+|+|+.||++|.++|+.|++..-.++. + ...+. .+++..++.||+++++++++.+-+       
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            3677899999999999999999999999999998866552 2 22333 567888999999999999988743       


Q ss_pred             --cEEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          228 --NKIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       228 --D~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        -.||||||+....          +...++||+.|+..+++++      +|.++...        .++++.+|+.+-..
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~------lpLlr~ar--------GRvVnvsS~~GR~~  171 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAF------LPLLRRAR--------GRVVNVSSVLGRVA  171 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHH------HHHHHhcc--------CeEEEecccccCcc
Confidence              7999999975321          4568999999999999999      55554322        14555555544332


Q ss_pred             ccCcccchhhhhhhhcccch
Q 013761          296 RQGTYFQDVVAFKYDAGMDA  315 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~  315 (437)
                      .|  ...+|..+|++.+...
T Consensus       172 ~p--~~g~Y~~SK~aVeaf~  189 (322)
T KOG1610|consen  172 LP--ALGPYCVSKFAVEAFS  189 (322)
T ss_pred             Cc--ccccchhhHHHHHHHH
Confidence            23  3566666666665544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.37  E-value=4.5e-12  Score=119.82  Aligned_cols=99  Identities=23%  Similarity=0.314  Sum_probs=80.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~A  234 (437)
                      |++++||||+|+||++++++|+++|++|++++|+.+. +....  ..+.++.+|++|.++++++++     .+|+|||+|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA--LGAEALALDVADPASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh--ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence            4689999999999999999999999999999998653 11222  246789999999999988754     269999999


Q ss_pred             cCCCC-----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          235 TARST-----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       235 g~~~~-----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |....           .++..+++|+.+++++++++.+
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  116 (222)
T PRK06953         79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLP  116 (222)
T ss_pred             CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence            97521           1466899999999999999843

>PLN00015 protochlorophyllide reductase

Probab=99.36  E-value=3.5e-12  Score=127.12  Aligned_cols=97  Identities=15%  Similarity=0.178  Sum_probs=78.1

Q ss_pred             EEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhC---CCCeEEEEecCCCHHHHHHHHhc-------ccEEE
Q 013761          165 LVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDML---PRSVEIVLGDVGDPCTLKAAVEN-------CNKII  231 (437)
Q Consensus       165 LVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~-------~D~VI  231 (437)
                      |||||++|||++++++|+++| ++|++++|+.+.  +....+   ...+.++.+|++|.++++++++.       +|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999997652  122222   23678899999999999888763       59999


Q ss_pred             EeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          232 YCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       232 h~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||+...          .++..+++|+.|++++++++.+
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  120 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLD  120 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99997421          1456899999999999888743

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.36  E-value=6.5e-12  Score=131.56  Aligned_cols=104  Identities=18%  Similarity=0.156  Sum_probs=83.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC--CCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML--PRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +.++++|||||+|+||+++++.|+++|++|++++|....+....+  .....++.+|++|.++++++++       .+|+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            678999999999999999999999999999999986442221111  1134678999999999988876       3599


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ||||||+...         .++..+++|+.|++++++++.+.
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  329 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAA  329 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence            9999997532         25678999999999999999653

>PRK07069 short chain dehydrogenase; Validated

Probab=99.35  E-value=6.8e-12  Score=120.01  Aligned_cols=97  Identities=15%  Similarity=0.168  Sum_probs=74.3

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecC-CcH--HHHhhC----C-CCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRK-ADQ--EVVDML----P-RSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~-~~~--~~~~~~----~-~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      +++||||+|+||+++++.|+++|++|++++|+ .+.  ...+.+    . ..+.++.+|++|.++++++++.       +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999999999999999999997 331  111111    1 2345688999999999887764       5


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                      |+||||||.....         +.+.+++|+.+++.+++++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  121 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHA  121 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            9999999975421         4567899999777666666

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.35  E-value=1e-11  Score=119.02  Aligned_cols=143  Identities=21%  Similarity=0.217  Sum_probs=103.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH----HHHhhCC----CCeEEEEecCCC-HHHHHHHHhc--
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ----EVVDMLP----RSVEIVLGDVGD-PCTLKAAVEN--  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~----~~~~~~~----~~v~~v~~Dltd-~~~v~~a~~~--  226 (437)
                      ++.+|+||||||++|||+++++.|+++|++|+++.|+.+.    .......    ..+.+..+|+++ .++++.+++.  
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999888887542    1122222    367788899998 8888877764  


Q ss_pred             -----ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 -----CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 -----~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                           +|++|||||+...          .+++.+++|+.|++.+++++      .+.+...          ++++.+++.
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~------~~~~~~~----------~Iv~isS~~  145 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAA------LPLMKKQ----------RIVNISSVA  145 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHH------HHhhhhC----------eEEEECCch
Confidence                 5999999998532          15679999999999999966      3333211          466666665


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhh
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                      .. ..+.. ...|..+|.+...+....
T Consensus       146 ~~-~~~~~-~~~Y~~sK~al~~~~~~l  170 (251)
T COG1028         146 GL-GGPPG-QAAYAASKAALIGLTKAL  170 (251)
T ss_pred             hc-CCCCC-cchHHHHHHHHHHHHHHH
Confidence            44 33321 467889988876655433

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=8.3e-12  Score=118.59  Aligned_cols=103  Identities=14%  Similarity=0.168  Sum_probs=82.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HH-hhC--CCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VV-DML--PRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~-~~~--~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      +++++|+||||+|+||.++++.|+++|++|++++|+.+.. .. ..+  ...+.++.+|++|+++++++++.       +
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5688999999999999999999999999999999986521 11 111  13678899999999999887764       4


Q ss_pred             cEEEEeccCCCCc-------hhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARSTI-------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~~-------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |.+||++|.....       ++..+++|+.+++++++++.+
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLR  123 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence            9999999864321       355789999999999998854

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.33  E-value=1e-11  Score=124.70  Aligned_cols=104  Identities=28%  Similarity=0.320  Sum_probs=85.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHH--------Hh-------hCCCCeEEEEecCC------CHHH
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEV--------VD-------MLPRSVEIVLGDVG------DPCT  219 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~--------~~-------~~~~~v~~v~~Dlt------d~~~  219 (437)
                      +++|+||||||+|+.|+.+|+.+= .+|++++|..+++.        ..       ...++++++.+|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999864 69999999776321        11       12468999999998      4567


Q ss_pred             HHHHHhcccEEEEeccCCCC--chhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          220 LKAAVENCNKIIYCATARST--ITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       220 v~~a~~~~D~VIh~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +..+.+.+|.|||||+....  +..++...||.||..+++.|.....|
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~K  128 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPK  128 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCc
Confidence            88888999999999998763  35778999999999999999887666

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.32  E-value=3.4e-11  Score=142.18  Aligned_cols=230  Identities=17%  Similarity=0.109  Sum_probs=141.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC----CeEEEEecCCcHH-HHhh--------------CCCCeEEEEecCCC-----
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG----YSVKALVRKADQE-VVDM--------------LPRSVEIVLGDVGD-----  216 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G----~~V~~~~R~~~~~-~~~~--------------~~~~v~~v~~Dltd-----  216 (437)
                      .++|+|||||||||++|++.|+++|    ++|+++.|..... ..+.              ...++.++.+|+++     
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999987    8999999975421 1110              12368899999974     


Q ss_pred             -HHHHHHHHhcccEEEEeccCCCC--chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-Ccchhhhh--hhhhccCC-
Q 013761          217 -PCTLKAAVENCNKIIYCATARST--ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLL--LAKFKSAD-  288 (437)
Q Consensus       217 -~~~v~~a~~~~D~VIh~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~--~~k~v~~s-  288 (437)
                       .+...++..++|+|||||+....  ....+...|+.|+.++++++.+.+++ +.++++. .++...+.  ...++... 
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence             45667778889999999997653  24445678999999999999988765 4455432 12110000  00000000 


Q ss_pred             -CCc---ceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee------------cc---cc-CCC-
Q 013761          289 -SLN---GWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL------------SK---KL-SLP-  347 (437)
Q Consensus       289 -sl~---~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i------------~~---~~-~~p-  347 (437)
                       .+.   .....+..+...|+.+|+.++........ .+..+...|+...+|....            .+   .+ .+| 
T Consensus      1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443      1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred             CCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence             010   00011222345699999998887654433 3666666666665552110            00   00 111 


Q ss_pred             ------cccHHHHHHHHHHHhccC---CcEEEEEccCCCCCCCCcHHHHHHHHHhh
Q 013761          348 ------LGCTLDRYEGLVLSVGGN---GRSYVLILEAGPSADRSQSKLYFARFSTK  394 (437)
Q Consensus       348 ------~g~v~D~~~gi~l~~~~~---Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~  394 (437)
                            ..+|+|++++++..+...   ....++++.++.   .+++.++++.+.+.
T Consensus      1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP---RIRFNDFLGTLKTY 1262 (1389)
T ss_pred             CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC---CCcHHHHHHHHHHh
Confidence                  227999999999887322   111223445443   46788999888654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.31  E-value=2.7e-12  Score=119.08  Aligned_cols=100  Identities=19%  Similarity=0.255  Sum_probs=81.4

Q ss_pred             CCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc--------cEEE
Q 013761          161 NTTVLVVGAT-SRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC--------NKII  231 (437)
Q Consensus       161 ~k~vLVTGAt-G~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~--------D~VI  231 (437)
                      -|+|||||++ ||||.+|+++|.++|+.|++..|+.+.-..-.+..++...++|+++++++.++...+        |++|
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~   86 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY   86 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence            4789999877 999999999999999999999998774211122346888999999999998876653        9999


Q ss_pred             EeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          232 YCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       232 h~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||||..-.         ..+..|++|+.|..++++++.
T Consensus        87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~  124 (289)
T KOG1209|consen   87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALS  124 (289)
T ss_pred             cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHH
Confidence            99997421         145689999999999999984

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.29  E-value=6.5e-11  Score=114.24  Aligned_cols=244  Identities=15%  Similarity=0.148  Sum_probs=136.0

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-cccEEEEeccCCC--Cc
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-NCNKIIYCATARS--TI  240 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-~~D~VIh~Ag~~~--~~  240 (437)
                      |+||||||+||++|+.+|.+.|++|+++.|+..... ..+...+.       ..+.+....+ ++|+|||+||..-  ..
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~-~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS-QNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh-hhcCcccc-------ccchhhhcccCCCCEEEECCCCcccccc
Confidence            689999999999999999999999999999876421 11221222       2234445555 6999999999642  22


Q ss_pred             h-----hhHHHHHHHHHHHHHHHHHhcCCce-eeeecC---CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          241 T-----GDLFRVDYQGVYNVTKAFQDFNNKL-AQLRAG---KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       241 ~-----~~~~~vNv~gt~~l~~aa~~~gvkl-~~l~~~---~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                      |     +.+.+.-+..|..|.++..+..-+- ..+++.   -||.+   .++.+.|.+...     ..|.......   .
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~---~~~~~tE~~~~g-----~~Fla~lc~~---W  141 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS---GDRVVTEESPPG-----DDFLAQLCQD---W  141 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC---CceeeecCCCCC-----CChHHHHHHH---H
Confidence            3     3467778889999999887554432 222221   13322   123333332111     1121111111   1


Q ss_pred             ccchhhhhcccccceeeeee---ec-cCccce-eccccC-------------CCcccHHHHHHHHHHHhccCC--cEEEE
Q 013761          312 GMDAKFELSETGDAVFSGYV---FT-RGGYVE-LSKKLS-------------LPLGCTLDRYEGLVLSVGGNG--RSYVL  371 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~---~~-~~G~~~-i~~~~~-------------~p~g~v~D~~~gi~l~~~~~G--e~y~l  371 (437)
                      |..+ ......+..++..|.   .+ .+|... +...|.             ++..|++|++++|..++....  ..|++
T Consensus       142 E~~a-~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~  220 (297)
T COG1090         142 EEEA-LQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNL  220 (297)
T ss_pred             HHHH-hhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccc
Confidence            1111 112222333333332   22 233111 111110             122289999999999996543  34555


Q ss_pred             EccCCCCCCCCcHHHHHHHHHhhhCCc-eecccCCCcccC--C-----CCCCCCCHHHHhhccceeecc
Q 013761          372 ILEAGPSADRSQSKLYFARFSTKVGFC-RVRVPFSSFRPV--K-----PDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       372 ~l~~~~~~~~~s~~e~~~~i~~~~G~~-~v~iP~~~~r~~--~-----~~~~~ld~~ki~~~gi~fep~  432 (437)
                        ....   .++.++|...+.+.++.+ ...+|-...+..  .     -..-..-|.|+...|+.|..-
T Consensus       221 --taP~---PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~  284 (297)
T COG1090         221 --TAPN---PVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYP  284 (297)
T ss_pred             --cCCC---cCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecC
Confidence              4332   367899999999998843 244554433322  1     111245578888999998764

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.28  E-value=4.6e-11  Score=106.61  Aligned_cols=102  Identities=24%  Similarity=0.293  Sum_probs=80.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH--------HHhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE--------VVDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~--------~~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      ++++||||+|+||.++++.|+++|+ .|+++.|+.+..        ..+..+.++.++.+|+++.++++++++.      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999996 688888865421        1112244678899999999998888765      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                       +|.|||+||.....         ++..+++|+.++.++++++++.+
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  127 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP  127 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC
Confidence             49999999964321         45679999999999999996544

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=2.9e-11  Score=120.57  Aligned_cols=149  Identities=11%  Similarity=0.048  Sum_probs=91.3

Q ss_pred             CCCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCC---------cHHHH--h---hCCC-----CeEEEEecCC
Q 013761          157 PGAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKA---------DQEVV--D---MLPR-----SVEIVLGDVG  215 (437)
Q Consensus       157 ~~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~---------~~~~~--~---~~~~-----~v~~v~~Dlt  215 (437)
                      .++++|+++||||+  .|||+++++.|+++|++|++.++.+         +....  .   ..+.     .+..+.+|++
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            45789999999995  9999999999999999999977532         00000  0   0000     0001123333


Q ss_pred             CHH------------------HHHHHHh-------cccEEEEeccCCC---C--------chhhHHHHHHHHHHHHHHHH
Q 013761          216 DPC------------------TLKAAVE-------NCNKIIYCATARS---T--------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       216 d~~------------------~v~~a~~-------~~D~VIh~Ag~~~---~--------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      +.+                  +++++++       .+|+||||||...   .        .|++.+++|+.|++++++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            332                  3555554       2599999998632   1        15678999999999999999


Q ss_pred             HhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          260 QDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       260 ~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                            ++.|..+  +       .++..+++......|+ +...|..+|.+...+......+
T Consensus       164 ------~p~m~~~--G-------~ii~iss~~~~~~~p~-~~~~Y~asKaAl~~lt~~la~e  209 (299)
T PRK06300        164 ------GPIMNPG--G-------STISLTYLASMRAVPG-YGGGMSSAKAALESDTKVLAWE  209 (299)
T ss_pred             ------HHHhhcC--C-------eEEEEeehhhcCcCCC-ccHHHHHHHHHHHHHHHHHHHH
Confidence                  5666432  1       2444444433333343 1125888887776655444433

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.24  E-value=2.6e-11  Score=113.73  Aligned_cols=171  Identities=21%  Similarity=0.201  Sum_probs=109.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecC-CcHH--HHhh---CCCCeEEEEecCCCHHHHHHHHhcc-----
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRK-ADQE--VVDM---LPRSVEIVLGDVGDPCTLKAAVENC-----  227 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~-~~~~--~~~~---~~~~v~~v~~Dltd~~~v~~a~~~~-----  227 (437)
                      ..+.++||||+.|||..|+++|++. |.++++..++ .+..  ..+.   ...+++++++||++.+++.++++++     
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3467999999999999999999974 7777666554 4431  1122   2568999999999999998888754     


Q ss_pred             ----cEEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCc--chhhhhhh--hhccCCC
Q 013761          228 ----NKIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKS--SKSKLLLA--KFKSADS  289 (437)
Q Consensus       228 ----D~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~--g~sk~~~~--k~v~~ss  289 (437)
                          |++|||||+....          |.+.+++|..|+..+.|++      +|.+.....  ....+.++  .+++.++
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~------lPLLkkaas~~~gd~~s~~raaIinisS  155 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF------LPLLKKAASKVSGDGLSVSRAAIINISS  155 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH------HHHHHHHhhcccCCcccccceeEEEeec
Confidence                9999999985321          5668999999999999999      665542110  00011111  2444433


Q ss_pred             Cccee-eccCcccchhhhhhhhcccchhhh---hcccc---cceeeeeeeccCc
Q 013761          290 LNGWE-VRQGTYFQDVVAFKYDAGMDAKFE---LSETG---DAVFSGYVFTRGG  336 (437)
Q Consensus       290 l~~~i-~rP~~~~~~y~~sk~a~~~~~~~~---~~~~~---~~v~~g~~~~~~G  336 (437)
                      ....+ ......+..|.++|.+....+..-   +...+   ..+++||+-+..|
T Consensus       156 ~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg  209 (249)
T KOG1611|consen  156 SAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG  209 (249)
T ss_pred             cccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC
Confidence            32221 111224567888888776555322   22222   2466777776544

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.22  E-value=1e-11  Score=126.85  Aligned_cols=254  Identities=31%  Similarity=0.388  Sum_probs=152.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHh--hCCCCeEEEEecCCCHHHH-HHHHhcc----cE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVD--MLPRSVEIVLGDVGDPCTL-KAAVENC----NK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~--~~~~~v~~v~~Dltd~~~v-~~a~~~~----D~  229 (437)
                      ...+.|+|+||||.+|+-+++.|+++|+.|.++.|+.+..  ...  ........+..|.....++ ..+++.+    .+
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~  156 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVI  156 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccccee
Confidence            4557999999999999999999999999999999987632  111  1123445555555544433 3333332    46


Q ss_pred             EEEeccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec---C-------------CcchhhhhhhhhccCCCC
Q 013761          230 IIYCATARSTI--TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA---G-------------KSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       230 VIh~Ag~~~~~--~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~---~-------------~~g~sk~~~~k~v~~ssl  290 (437)
                      ++-++|-....  ...-..|...|+.|+++||+.+|++ +.++++   .             .+...|..+++++.++++
T Consensus       157 v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sgl  236 (411)
T KOG1203|consen  157 VIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSGL  236 (411)
T ss_pred             EEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcCC
Confidence            66666543322  1234568899999999999999997 333321   1             122456777889999999


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHh---ccCCc
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSV---GGNGR  367 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~---~~~Ge  367 (437)
                      +++++||+.+....+..++........            .....++-..+.         -.|+++..+.++   +.+++
T Consensus       237 ~ytiIR~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~---------r~~vael~~~all~~~~~~~  295 (411)
T KOG1203|consen  237 PYTIIRPGGLEQDTGGQREVVVDDEKE------------LLTVDGGAYSIS---------RLDVAELVAKALLNEAATFK  295 (411)
T ss_pred             CcEEEeccccccCCCCcceecccCccc------------cccccccceeee---------hhhHHHHHHHHHhhhhhccc
Confidence            999999997765544433221111000            000111100100         124444444433   34454


Q ss_pred             EEEEEccCCCCCCCCcHHHHHHHHHhhh---------------CCceecccCCCcccCCCCCCCCCHHHHhhccceeecc
Q 013761          368 SYVLILEAGPSADRSQSKLYFARFSTKV---------------GFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       368 ~y~l~l~~~~~~~~~s~~e~~~~i~~~~---------------G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      .|....... +.+...+.++.+.+....               +.... +++..+++...+.+++|...++.. .+|++.
T Consensus       296 k~~~~v~~~-~gpg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~  372 (411)
T KOG1203|consen  296 KVVELVLKP-EGPGRPYKVLLELFPLDESSQTYPVFAARPTEAGFCRV-VPFSAFRPANKEDPPLDPGLSERP-ARFSSL  372 (411)
T ss_pred             eeEEeecCC-CCCCccHHHHHhhcccccccccccceeccccccceeEe-cccccccccccccCccccccccCc-chhhhh
Confidence            444332221 122334555555544321               11122 677788888899999999999998 999888


Q ss_pred             cCCC
Q 013761          433 RQVF  436 (437)
Q Consensus       433 ~~~~  436 (437)
                      .|.|
T Consensus       373 ~~d~  376 (411)
T KOG1203|consen  373 IQDP  376 (411)
T ss_pred             ccCC
Confidence            7765

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.20  E-value=4.1e-11  Score=117.44  Aligned_cols=163  Identities=17%  Similarity=0.112  Sum_probs=111.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh----hCCCCeEEEEecCCCHHH----HHHHHhcc--c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD----MLPRSVEIVLGDVGDPCT----LKAAVENC--N  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~----~~~~~v~~v~~Dltd~~~----v~~a~~~~--D  228 (437)
                      ++-++|||||.|||++.+++|+++|.+|++++|+++.  ...+    ..+.++.++..|.++.+.    +++.+.+.  -
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            4789999999999999999999999999999999872  2222    234568899999998775    44555554  5


Q ss_pred             EEEEeccCCCCc-----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          229 KIIYCATARSTI-----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       229 ~VIh~Ag~~~~~-----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +||||+|+....           ....+.+|+.++..+++..      +|.|-....|       -+++.++......-|
T Consensus       129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~i------lp~M~~r~~G-------~IvnigS~ag~~p~p  195 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLI------LPGMVERKKG-------IIVNIGSFAGLIPTP  195 (312)
T ss_pred             EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHh------hhhhhcCCCc-------eEEEeccccccccCh
Confidence            899999986532           2347889999999999999      7777665544       366666665544333


Q ss_pred             CcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYV  338 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~  338 (437)
                        ....|..+|.-...+...-..|+...-+......|+.++
T Consensus       196 --~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~Va  234 (312)
T KOG1014|consen  196 --LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVA  234 (312)
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhhee
Confidence              355566666544444433344443322223344455433

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=1.1e-11  Score=111.49  Aligned_cols=100  Identities=23%  Similarity=0.310  Sum_probs=86.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHHHhhCCCCeEEEEecCCCHHHHHHHHhcc-------cEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTLKAAVENC-------NKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~-------D~V  230 (437)
                      .+-+.|||||.+|+|++.+++|+.+|+.|+++|-..+  .+..++++..+.|...|++.++++..+++.+       |++
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            5668999999999999999999999999999998766  3566788899999999999999999988753       999


Q ss_pred             EEeccCCCC---------------chhhHHHHHHHHHHHHHHHH
Q 013761          231 IYCATARST---------------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       231 Ih~Ag~~~~---------------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      +||||+...               ++.+++++|+.|++|+++..
T Consensus        88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~  131 (260)
T KOG1199|consen   88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG  131 (260)
T ss_pred             eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence            999997421               14568999999999999865

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.18  E-value=3.9e-11  Score=108.24  Aligned_cols=103  Identities=21%  Similarity=0.265  Sum_probs=86.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcc---cEEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENC---NKIIY  232 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~---D~VIh  232 (437)
                      ++.|+.|+|||+.-|||++++..|++.|++|+++.|++.+  ...++.+.-+..+.+|+++.+.+.+++..+   |.++|
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence            3789999999999999999999999999999999999774  233444556888999999999999888764   99999


Q ss_pred             eccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          233 CATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       233 ~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |||+...         .+++.|++|+.+++++.+...
T Consensus        84 NAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~va  120 (245)
T KOG1207|consen   84 NAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVA  120 (245)
T ss_pred             cchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHH
Confidence            9997532         256789999999999998853

>PRK06720 hypothetical protein; Provisional

Probab=99.12  E-value=5.3e-10  Score=102.41  Aligned_cols=101  Identities=16%  Similarity=0.094  Sum_probs=75.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.+|+++||||+++||+++++.|++.|++|++++|+.+.  ...+   ..+....++.+|++|.+++.++++       .
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999987552  1112   224456788999999999888764       3


Q ss_pred             ccEEEEeccCCCCc---hh----hHHHHHHHHHHHHHHHH
Q 013761          227 CNKIIYCATARSTI---TG----DLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---~~----~~~~vNv~gt~~l~~aa  259 (437)
                      +|++|||||+....   ++    ..-.+|+.++...++.+
T Consensus        94 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (169)
T PRK06720         94 IDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQL  133 (169)
T ss_pred             CCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHH
Confidence            59999999975421   11    22355666766666655

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.05  E-value=1.3e-09  Score=133.05  Aligned_cols=106  Identities=17%  Similarity=0.135  Sum_probs=85.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCc------------------------------------------
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKAD------------------------------------------  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~------------------------------------------  196 (437)
                      .++++|||||++|||.+++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4789999999999999999999998 699999999820                                          


Q ss_pred             ----H---H---HHhhCCCCeEEEEecCCCHHHHHHHHhc------ccEEEEeccCCCC---------chhhHHHHHHHH
Q 013761          197 ----Q---E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN------CNKIIYCATARST---------ITGDLFRVDYQG  251 (437)
Q Consensus       197 ----~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~------~D~VIh~Ag~~~~---------~~~~~~~vNv~g  251 (437)
                          .   .   .+...+..+.++.+|++|.++++++++.      +|.||||||+...         .+++++++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                0   0   0112245688999999999999988864      5999999997532         267799999999


Q ss_pred             HHHHHHHHHhcCCc
Q 013761          252 VYNVTKAFQDFNNK  265 (437)
Q Consensus       252 t~~l~~aa~~~gvk  265 (437)
                      ++++++++.....+
T Consensus      2156 ~~~Ll~al~~~~~~ 2169 (2582)
T TIGR02813      2156 LLSLLAALNAENIK 2169 (2582)
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999998765543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.99  E-value=2.2e-09  Score=105.29  Aligned_cols=101  Identities=24%  Similarity=0.298  Sum_probs=82.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC-----CCeEEEEecCCCHHHHHHHHhcc-------
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP-----RSVEIVLGDVGDPCTLKAAVENC-------  227 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~-----~~v~~v~~Dltd~~~v~~a~~~~-------  227 (437)
                      .+|+|||++.+||.+++.++..+|++|.++.|+...  ++.+.+.     ..+.+..+|+.|.+++..++++.       
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            589999999999999999999999999999998762  2222221     23678999999999999998764       


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      |.+|||||..-+.         .+..+++|..|+.++++++...
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~  157 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARA  157 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence            9999999974322         4568999999999999998543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.99  E-value=9.5e-10  Score=105.29  Aligned_cols=92  Identities=20%  Similarity=0.269  Sum_probs=74.4

Q ss_pred             CCC--ChHHHHHHHHHHHCCCeEEEEecCCcH--H----HHhhCCCCeEEEEecCCCHHHHHHHHhc--------ccEEE
Q 013761          168 GAT--SRIGRIVIRKLMLRGYSVKALVRKADQ--E----VVDMLPRSVEIVLGDVGDPCTLKAAVEN--------CNKII  231 (437)
Q Consensus       168 GAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~--~----~~~~~~~~v~~v~~Dltd~~~v~~a~~~--------~D~VI  231 (437)
                      |++  +|||++++++|+++|++|++++|+.+.  .    ..++.+  ..++.+|++|+++++++++.        +|+||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG--AEVIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT--SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC--CceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            666  999999999999999999999998763  1    122233  34699999999999888654        49999


Q ss_pred             EeccCCCC-----c--------hhhHHHHHHHHHHHHHHHHHh
Q 013761          232 YCATARST-----I--------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       232 h~Ag~~~~-----~--------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||....     +        +...+++|+.+++.+++++.+
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALP  121 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99997653     1        456899999999999999944

...

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.98  E-value=8.1e-09  Score=95.31  Aligned_cols=103  Identities=23%  Similarity=0.309  Sum_probs=76.0

Q ss_pred             EEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCc-----HH---HHhhCCCCeEEEEecCCCHHHHHHHHhcc------
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKAD-----QE---VVDMLPRSVEIVLGDVGDPCTLKAAVENC------  227 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~-----~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~~------  227 (437)
                      ++|||||.|+||..+++.|+.+| .+|+++.|+..     ..   .++..+..+.++.+|++|++++.++++.+      
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            68999999999999999999998 48999999821     11   22334568999999999999999999764      


Q ss_pred             -cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          228 -NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       228 -D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                       |.|||+||.....         ++.++..-+.|+.+|.+++.....+
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~  129 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLD  129 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTS
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCC
Confidence             7899999985432         3457888899999999999776665

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.92  E-value=7.8e-08  Score=100.11  Aligned_cols=105  Identities=23%  Similarity=0.342  Sum_probs=80.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCcH----HHHh-------------hC---CCCeEEEEecCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG---YSVKALVRKADQ----EVVD-------------ML---PRSVEIVLGDVG  215 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G---~~V~~~~R~~~~----~~~~-------------~~---~~~v~~v~~Dlt  215 (437)
                      +.+|+|+|||||||+|..+++.|+..-   -+++++-|....    +.+.             ..   -.++..+.||++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            678999999999999999999999742   378888886541    1111             11   136788899998


Q ss_pred             CH------HHHHHHHhcccEEEEeccCCCCc--hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          216 DP------CTLKAAVENCNKIIYCATARSTI--TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       216 d~------~~v~~a~~~~D~VIh~Ag~~~~~--~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      ++      .++....+.+|+|||+||.....  .+....+|..|+.++++.|++..
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~  145 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMV  145 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhh
Confidence            64      45667788899999999976543  44578899999999999998754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.80  E-value=7.8e-08  Score=87.89  Aligned_cols=98  Identities=18%  Similarity=0.321  Sum_probs=78.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT  241 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~  241 (437)
                      |+|.|.||||-+|+.|+++.+.+|++|++++|+++...  . -..+.+++.||.|++++.+.+.+.|+||..-+......
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~--~-~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA--A-RQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcc--c-cccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            58999999999999999999999999999999876311  1 14678999999999999999999999999887654333


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          242 GDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       242 ~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +.   ........+++.++.+++.
T Consensus        78 ~~---~~~k~~~~li~~l~~agv~   98 (211)
T COG2910          78 DE---LHSKSIEALIEALKGAGVP   98 (211)
T ss_pred             hH---HHHHHHHHHHHHHhhcCCe
Confidence            22   2233466788888887875

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.73  E-value=6.1e-08  Score=89.49  Aligned_cols=95  Identities=19%  Similarity=0.233  Sum_probs=72.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhcc-------cEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVENC-------NKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~-------D~V  230 (437)
                      |+++||||||++| .+++.|+++|++|++++|+.+.  .....+  ...+.++.+|++|.+++.++++++       |++
T Consensus         1 m~vlVtGGtG~gg-~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLK-RVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHH-HHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            4799999997665 5999999999999999997653  111112  346788999999999999988754       666


Q ss_pred             EEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc-----eeeee
Q 013761          231 IYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK-----LAQLR  270 (437)
Q Consensus       231 Ih~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk-----l~~l~  270 (437)
                      |+.+             ++.++.++.++|++.+++     +.+|-
T Consensus        80 v~~v-------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~  111 (177)
T PRK08309         80 VAWI-------------HSSAKDALSVVCRELDGSSETYRLFHVL  111 (177)
T ss_pred             EEec-------------cccchhhHHHHHHHHccCCCCceEEEEe
Confidence            6654             344678899999999977     55553

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.71  E-value=3.4e-08  Score=94.77  Aligned_cols=80  Identities=23%  Similarity=0.293  Sum_probs=66.1

Q ss_pred             HHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc----ccEEEEeccCCC-CchhhHHHHHHHH
Q 013761          177 VIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN----CNKIIYCATARS-TITGDLFRVDYQG  251 (437)
Q Consensus       177 la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~----~D~VIh~Ag~~~-~~~~~~~~vNv~g  251 (437)
                      ++++|+++|++|++++|+.+...      ...++++|++|.++++++++.    +|+||||||... ..++..+++|+.+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~   74 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLG   74 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHH
Confidence            47899999999999999865321      135678999999999999874    699999999753 3477899999999


Q ss_pred             HHHHHHHHHhc
Q 013761          252 VYNVTKAFQDF  262 (437)
Q Consensus       252 t~~l~~aa~~~  262 (437)
                      ++++++++.+.
T Consensus        75 ~~~l~~~~~~~   85 (241)
T PRK12428         75 LRHLTEALLPR   85 (241)
T ss_pred             HHHHHHHHHHh
Confidence            99999998653

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.69  E-value=5.3e-08  Score=92.90  Aligned_cols=104  Identities=19%  Similarity=0.309  Sum_probs=79.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-----CeEEEEecCCcH--HH---Hhh-CC---CCeEEEEecCCCHHHHHHHHh
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-----YSVKALVRKADQ--EV---VDM-LP---RSVEIVLGDVGDPCTLKAAVE  225 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-----~~V~~~~R~~~~--~~---~~~-~~---~~v~~v~~Dltd~~~v~~a~~  225 (437)
                      +.|.+||||+++|||.+||.+|++..     .++++..|+-+.  +.   +.. .+   .+++++..|+++..++..+.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            45899999999999999999999864     246677787652  11   122 22   368899999999999888876


Q ss_pred             cc-------cEEEEeccCCCCc------------------------------------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 NC-------NKIIYCATARSTI------------------------------------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 ~~-------D~VIh~Ag~~~~~------------------------------------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ++       |.|+-|||++..+                                    ...+|++||.|.+.+++.+...
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            53       9999999975321                                    2348999999999999887664


Q ss_pred             C
Q 013761          263 N  263 (437)
Q Consensus       263 g  263 (437)
                      -
T Consensus       162 l  162 (341)
T KOG1478|consen  162 L  162 (341)
T ss_pred             h
Confidence            3

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.55  E-value=4.7e-07  Score=92.76  Aligned_cols=92  Identities=23%  Similarity=0.308  Sum_probs=75.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +|+|||.|| |+||+.++..|+++| .+|++.+|+.+.  ........+++.+++|+.|.+++.+++++.|+|||++...
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            468999999 999999999999999 999999999763  2223334589999999999999999999999999998642


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                      ..             ..++++|.++|+.+
T Consensus        80 ~~-------------~~i~ka~i~~gv~y   95 (389)
T COG1748          80 VD-------------LTILKACIKTGVDY   95 (389)
T ss_pred             hh-------------HHHHHHHHHhCCCE
Confidence            21             25778888888663

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.52  E-value=4.1e-07  Score=92.95  Aligned_cols=77  Identities=16%  Similarity=0.183  Sum_probs=60.6

Q ss_pred             CCCEEEEECCCChHHHH--HHHHHHHCCCeEEEEecCCc--H---------------HHHhhCCCCeEEEEecCCCHHHH
Q 013761          160 QNTTVLVVGATSRIGRI--VIRKLMLRGYSVKALVRKAD--Q---------------EVVDMLPRSVEIVLGDVGDPCTL  220 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~--la~~Ll~~G~~V~~~~R~~~--~---------------~~~~~~~~~v~~v~~Dltd~~~v  220 (437)
                      -+|++|||||+++||.+  +++.| ..|++|+++++..+  .               +..+..+..+..+.+|+++.+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            36899999999999999  89999 99999988885321  1               11222334567889999999999


Q ss_pred             HHHHhc-------ccEEEEeccCC
Q 013761          221 KAAVEN-------CNKIIYCATAR  237 (437)
Q Consensus       221 ~~a~~~-------~D~VIh~Ag~~  237 (437)
                      +++++.       +|+||||+|..
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccC
Confidence            888764       49999999975

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.51  E-value=1.1e-06  Score=88.38  Aligned_cols=113  Identities=16%  Similarity=0.151  Sum_probs=84.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++|+|+|++|.||+.++..|+..|  .+++++|+.... +..+...........+.+|+.++.++++++|+||++||
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG   85 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG   85 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence            567799999999999999999998665  689999984321 11111111113345577776667789999999999999


Q ss_pred             CCCC---chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec
Q 013761          236 ARST---ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA  271 (437)
Q Consensus       236 ~~~~---~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~  271 (437)
                      ....   .+.+.+..|+..+.++++++++++++ +..+.+
T Consensus        86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~S  125 (321)
T PTZ00325         86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVS  125 (321)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8543   25678999999999999999999987 334433

>PRK09620 hypothetical protein; Provisional

Probab=98.47  E-value=3.3e-07  Score=87.98  Aligned_cols=82  Identities=17%  Similarity=0.247  Sum_probs=58.2

Q ss_pred             CCCCEEEEECCC----------------ChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCC--CCeEEEEecCCCHHHH
Q 013761          159 AQNTTVLVVGAT----------------SRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLP--RSVEIVLGDVGDPCTL  220 (437)
Q Consensus       159 l~~k~vLVTGAt----------------G~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~v~~v~~Dltd~~~v  220 (437)
                      |.||+||||+|.                |+||++||++|+.+|++|+++++..... .....  ..+..+.+|....+.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~-~~~~~~~~~~~~V~s~~d~~~~l   79 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEK-PNDINNQLELHPFEGIIDLQDKM   79 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCC-CcccCCceeEEEEecHHHHHHHH
Confidence            468999999886                9999999999999999999998743210 01111  1234455644444678


Q ss_pred             HHHHh--cccEEEEeccCCCCch
Q 013761          221 KAAVE--NCNKIIYCATARSTIT  241 (437)
Q Consensus       221 ~~a~~--~~D~VIh~Ag~~~~~~  241 (437)
                      .+++.  ++|+|||+||+....+
T Consensus        80 ~~~~~~~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         80 KSIITHEKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHhcccCCCEEEECccccceec
Confidence            88885  5799999999855433

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.45  E-value=7e-07  Score=85.78  Aligned_cols=95  Identities=14%  Similarity=0.119  Sum_probs=60.4

Q ss_pred             EEEEEC-CCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCC--HHHHHHHHhcccEEEEeccCCCC
Q 013761          163 TVLVVG-ATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGD--PCTLKAAVENCNKIIYCATARST  239 (437)
Q Consensus       163 ~vLVTG-AtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd--~~~v~~a~~~~D~VIh~Ag~~~~  239 (437)
                      +-.||+ +||+||++|+++|+++|++|++++|.....  ......+.++.++..+  .+.+.+.+.++|+||||||+...
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~   94 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDY   94 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCc
Confidence            455664 568899999999999999999998764311  1112356666654433  24566677788999999998653


Q ss_pred             chh-hHHHHHHHHHHHHHHHH
Q 013761          240 ITG-DLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       240 ~~~-~~~~vNv~gt~~l~~aa  259 (437)
                      ... ..-..++..++++...+
T Consensus        95 ~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         95 TPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             eehhhhhhhhhhhhhhhhhhh
Confidence            221 11122344445555555

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.43  E-value=7.3e-07  Score=90.00  Aligned_cols=101  Identities=15%  Similarity=0.157  Sum_probs=73.3

Q ss_pred             EEEEECCCChHHHHHHHHHHHCC-------CeEEEEecCCcHHHHhh----CCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRG-------YSVKALVRKADQEVVDM----LPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G-------~~V~~~~R~~~~~~~~~----~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      +|+||||+|+||++++..|+..+       .+|+++|++...+....    +.+.......|+....++.+.++++|+||
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiVI   83 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVAI   83 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEEE
Confidence            79999999999999999999854       58999999653211111    00001012235555667778899999999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      |+||.....   ..+.++.|+.-...+.+.+.++.
T Consensus        84 ~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~  118 (325)
T cd01336          84 LVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYA  118 (325)
T ss_pred             EeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999986532   35689999998888988888774

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.35  E-value=1.5e-06  Score=89.99  Aligned_cols=76  Identities=18%  Similarity=0.220  Sum_probs=61.1

Q ss_pred             CCCCCEEEEECC----------------CChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHH
Q 013761          158 GAQNTTVLVVGA----------------TSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK  221 (437)
Q Consensus       158 ~l~~k~vLVTGA----------------tG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~  221 (437)
                      ++.+|+||||||                +|++|.+++++|+.+|++|++++++.+.    ..+..  +..+|+++.+++.
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~----~~~~~--~~~~dv~~~~~~~  258 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL----PTPAG--VKRIDVESAQEML  258 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc----cCCCC--cEEEccCCHHHHH
Confidence            478999999999                7889999999999999999999987531    11112  3467999998888


Q ss_pred             HHHh----cccEEEEeccCCCC
Q 013761          222 AAVE----NCNKIIYCATARST  239 (437)
Q Consensus       222 ~a~~----~~D~VIh~Ag~~~~  239 (437)
                      +++.    .+|++|||||+...
T Consensus       259 ~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        259 DAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHhcCCCCEEEEccccccc
Confidence            7775    46999999998643

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.35  E-value=1.9e-06  Score=78.40  Aligned_cols=140  Identities=16%  Similarity=0.134  Sum_probs=102.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      |.+|.++|.||||-.|+.+++++++.+  -+|+++.|+....  ......+.....|....++....+++.|+.|++-|.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d--~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgT   93 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD--PATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGT   93 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC--ccccceeeeEEechHHHHHHHhhhcCCceEEEeecc
Confidence            567899999999999999999999988  4899999974310  112345667788999999999999999999999987


Q ss_pred             CCCc--hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec---CC-----cchhhhhhhhhccCCCC-cceeeccCcc
Q 013761          237 RSTI--TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA---GK-----SSKSKLLLAKFKSADSL-NGWEVRQGTY  300 (437)
Q Consensus       237 ~~~~--~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~---~~-----~g~sk~~~~k~v~~ssl-~~~i~rP~~~  300 (437)
                      +...  .+.++.+...-...+.+++++.|++ +..+++   .+     |...|..+|+-+.+-.. .+.++||+..
T Consensus        94 TRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFlY~k~KGEvE~~v~eL~F~~~~i~RPG~l  169 (238)
T KOG4039|consen   94 TRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFLYMKMKGEVERDVIELDFKHIIILRPGPL  169 (238)
T ss_pred             cccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccceeeeeccchhhhhhhhccccEEEEecCcce
Confidence            6432  4567777777888899999999998 333332   22     33455555555444433 3567889844

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.34  E-value=1.3e-06  Score=82.80  Aligned_cols=217  Identities=16%  Similarity=0.098  Sum_probs=135.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CC-eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR-GY-SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~-G~-~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~  236 (437)
                      -.+|||||+-|.+|..++..|..+ |- .|++.|........   -..--++..|+.|...+++++-  .+|-+||..+.
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V---~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSAL  120 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV---TDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSAL  120 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh---cccCCchhhhhhccccHHHhhcccccceeeeHHHH
Confidence            358999999999999999988664 64 46665553322111   1123467789999999999874  46999998765


Q ss_pred             CCCc----hhhHHHHHHHHHHHHHHHHHhcCCceeeeec-CCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          237 RSTI----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRA-GKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       237 ~~~~----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~-~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                      .+..    ..-..+||+.|..|+++.++++..++-.-+. +..|...     . .......++-||-   .-||.+|.-+
T Consensus       121 LSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtS-----P-RNPTPdltIQRPR---TIYGVSKVHA  191 (366)
T KOG2774|consen  121 LSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTS-----P-RNPTPDLTIQRPR---TIYGVSKVHA  191 (366)
T ss_pred             HHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCC-----C-CCCCCCeeeecCc---eeechhHHHH
Confidence            3221    2235789999999999999998877432221 1111000     0 0111234556664   5588999999


Q ss_pred             ccchhhhhcccccceeeee----eec--cCc----cce---------------eccccCCCcccHHHHHHHHHHHhccCC
Q 013761          312 GMDAKFELSETGDAVFSGY----VFT--RGG----YVE---------------LSKKLSLPLGCTLDRYEGLVLSVGGNG  366 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~----~~~--~~G----~~~---------------i~~~~~~p~g~v~D~~~gi~l~~~~~G  366 (437)
                      +..+.++..+++......+    +.+  ++|    ++.               .+.+-.+|.-|+.|+..+++..+..+.
T Consensus       192 EL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~  271 (366)
T KOG2774|consen  192 ELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADS  271 (366)
T ss_pred             HHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCH
Confidence            8888888777776433333    322  333    110               111112455599999999998885543


Q ss_pred             -----cEEEEEccCCCCCCCCcHHHHHHHHHhhh
Q 013761          367 -----RSYVLILEAGPSADRSQSKLYFARFSTKV  395 (437)
Q Consensus       367 -----e~y~l~l~~~~~~~~~s~~e~~~~i~~~~  395 (437)
                           ..|++..-      .-+-.|+++.+.+..
T Consensus       272 ~~lkrr~ynvt~~------sftpee~~~~~~~~~  299 (366)
T KOG2774|consen  272 QSLKRRTYNVTGF------SFTPEEIADAIRRVM  299 (366)
T ss_pred             HHhhhheeeecee------ccCHHHHHHHHHhhC
Confidence                 45776322      124578888888764

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.33  E-value=4.6e-07  Score=85.50  Aligned_cols=149  Identities=17%  Similarity=0.157  Sum_probs=92.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEE--ecCCcH-HH-HhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKAL--VRKADQ-EV-VDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~--~R~~~~-~~-~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +++.+||||++.|||..++..+.+++-+....  .|...+ +. .....+......+|++....+.+.++.       -|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            56789999999999999999999888554433  332221 00 000122233345667666655555543       29


Q ss_pred             EEEEeccCCCCc------------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          229 KIIYCATARSTI------------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       229 ~VIh~Ag~~~~~------------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      +||||||..++.            |.+.++.|+.+...+.+.+      ++.+...+.-      ..+++.++...  ++
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~------l~~lk~~p~~------~~vVnvSS~aa--v~  150 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWA------LPKLKKSPVN------GNVVNVSSLAA--VR  150 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHH------HHHhcCCCcc------CeEEEecchhh--hc
Confidence            999999975432            7789999999999999877      4444322100      02344444332  35


Q ss_pred             cCcccchhhhhhhhcccchh-hhhccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAK-FELSET  322 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~-~~~~~~  322 (437)
                      |-.-...|+.+|.+-+++.. +..+|.
T Consensus       151 p~~~wa~yc~~KaAr~m~f~~lA~EEp  177 (253)
T KOG1204|consen  151 PFSSWAAYCSSKAARNMYFMVLASEEP  177 (253)
T ss_pred             cccHHHHhhhhHHHHHHHHHHHhhcCc
Confidence            54445678888888877763 444443

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.32  E-value=2.8e-06  Score=79.18  Aligned_cols=79  Identities=19%  Similarity=0.239  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.+++++|+||+|++|+.+++.|++.|++|++++|+.+.  ...+.+.  ....+..+|+.+.+++.++++++|+||++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            3678899999999999999999999999999999998652  1112221  13456678999999999999999999997


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      ...
T Consensus       105 t~~  107 (194)
T cd01078         105 GAA  107 (194)
T ss_pred             CCC
Confidence            643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN00106 malate dehydrogenase

Probab=98.31  E-value=4.5e-06  Score=84.12  Aligned_cols=106  Identities=15%  Similarity=0.117  Sum_probs=80.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ..++|+||||+|.||..++..|+..|  .+++++|++... +..+...........++++.+++.++++++|+|||+||.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            34699999999999999999999776  489999987621 111111111122334655566688899999999999998


Q ss_pred             CCC---chhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          237 RST---ITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       237 ~~~---~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ...   .+.+.+..|...+.++.+++.+++.+
T Consensus        97 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~  128 (323)
T PLN00106         97 PRKPGMTRDDLFNINAGIVKTLCEAVAKHCPN  128 (323)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            543   36779999999999999999999976

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.26  E-value=1.4e-06  Score=83.54  Aligned_cols=88  Identities=11%  Similarity=0.095  Sum_probs=58.9

Q ss_pred             EEEEEC-CCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEEEec
Q 013761          163 TVLVVG-ATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKIIYCA  234 (437)
Q Consensus       163 ~vLVTG-AtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VIh~A  234 (437)
                      +-.||. ++|+||+++|++|+++|++|+++++...   ....    ....+|+.+.+++.++++       .+|+|||||
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~---l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA---LKPE----PHPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh---cccc----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            445555 4799999999999999999999876321   1111    123579999888877654       359999999


Q ss_pred             cCCCCc------hhhHHHHHHHHHHHHHH
Q 013761          235 TARSTI------TGDLFRVDYQGVYNVTK  257 (437)
Q Consensus       235 g~~~~~------~~~~~~vNv~gt~~l~~  257 (437)
                      |+....      .+++.+++..+++.+.+
T Consensus        89 gv~d~~~~~~~s~e~~~~~~~~~~~~~~~  117 (227)
T TIGR02114        89 AVSDYTPVYMTDLEQVQASDNLNEFLSKQ  117 (227)
T ss_pred             EeccccchhhCCHHHHhhhcchhhhhccc
Confidence            975422      23344555555554443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.21  E-value=7.3e-06  Score=84.42  Aligned_cols=73  Identities=34%  Similarity=0.591  Sum_probs=58.0

Q ss_pred             EEEECCCChHHHHHHHHHHHCC-C-eEEEEecCCcH--HHHhh-CCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          164 VLVVGATSRIGRIVIRKLMLRG-Y-SVKALVRKADQ--EVVDM-LPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G-~-~V~~~~R~~~~--~~~~~-~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      |+|.|| |++|+.+++.|++.+ . +|++.+|+.+.  ...+. ....+.++++|+.|.+++.++++++|+||||++..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            789999 999999999999987 4 89999998774  22222 45689999999999999999999999999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.20  E-value=2.2e-05  Score=74.38  Aligned_cols=81  Identities=14%  Similarity=0.167  Sum_probs=63.6

Q ss_pred             CCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhCC---CCeEEEEecCCCHHHHHHHHhcc----
Q 013761          158 GAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDMLP---RSVEIVLGDVGDPCTLKAAVENC----  227 (437)
Q Consensus       158 ~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~~---~~v~~v~~Dltd~~~v~~a~~~~----  227 (437)
                      .|.||++||+|-.  ..|+..|++.|.++|+++......+. ....+++.   ....+++||+++.++++++|+.+    
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence            3789999999965  68999999999999999988877654 11122221   13467899999999999998764    


Q ss_pred             ---cEEEEeccCCC
Q 013761          228 ---NKIIYCATARS  238 (437)
Q Consensus       228 ---D~VIh~Ag~~~  238 (437)
                         |.|||+.|...
T Consensus        83 g~lD~lVHsIaFa~   96 (259)
T COG0623          83 GKLDGLVHSIAFAP   96 (259)
T ss_pred             CcccEEEEEeccCC
Confidence               99999998754

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.16  E-value=7.7e-06  Score=81.26  Aligned_cols=78  Identities=14%  Similarity=0.238  Sum_probs=61.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCC---cH--HHHhhC---CCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKA---DQ--EVVDML---PRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~---~~--~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      +.+|+++|||| ||+|++++..|+..|++ |++++|+.   +.  +..+.+   ...+.+..+|+.+.+++.+.++.+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            56789999999 89999999999999986 99999986   21  222222   22445667899998888888889999


Q ss_pred             EEEeccCC
Q 013761          230 IIYCATAR  237 (437)
Q Consensus       230 VIh~Ag~~  237 (437)
                      ||||-.+.
T Consensus       203 lINaTp~G  210 (289)
T PRK12548        203 LVNATLVG  210 (289)
T ss_pred             EEEeCCCC
Confidence            99987543

>cd00704 MDH Malate dehydrogenase

Probab=97.93  E-value=9.2e-05  Score=74.75  Aligned_cols=96  Identities=17%  Similarity=0.174  Sum_probs=72.2

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcHHHHhhCCCCeEEEEecCCCH-----------HHHHHHH
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQEVVDMLPRSVEIVLGDVGDP-----------CTLKAAV  224 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~-----------~~v~~a~  224 (437)
                      +|.||||+|.||+.++..|+..|.       +++++|++...       +.......|+.|.           ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------KALEGVVMELQDCAFPLLKGVVITTDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------CccceeeeehhhhcccccCCcEEecChHHHh
Confidence            689999999999999999988662       59999987521       0122333444443           3456889


Q ss_pred             hcccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC-Cc
Q 013761          225 ENCNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN-NK  265 (437)
Q Consensus       225 ~~~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g-vk  265 (437)
                      +++|+|||+||....+   -.+.+..|+.-...+.+.+.++. ..
T Consensus        75 ~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~  119 (323)
T cd00704          75 KDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPT  119 (323)
T ss_pred             CCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCC
Confidence            9999999999985433   34689999999999999998884 55

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.91  E-value=3.5e-05  Score=78.09  Aligned_cols=75  Identities=25%  Similarity=0.370  Sum_probs=54.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC-C-CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLR-G-YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~-G-~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++.+++|+||||+|+||+++++.|+.+ | .+|+++.|+.+.  +..+...  +..+|+.   ++.+++.++|+|||+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~r--l~~La~e--l~~~~i~---~l~~~l~~aDiVv~~ts  224 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQER--LQELQAE--LGGGKIL---SLEEALPEADIVVWVAS  224 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHH--HHHHHHH--hccccHH---hHHHHHccCCEEEECCc
Confidence            478899999999999999999999864 5 589999987542  1111111  1123443   46688889999999998


Q ss_pred             CCCC
Q 013761          236 ARST  239 (437)
Q Consensus       236 ~~~~  239 (437)
                      ....
T Consensus       225 ~~~~  228 (340)
T PRK14982        225 MPKG  228 (340)
T ss_pred             CCcC
Confidence            7553

>PRK05086 malate dehydrogenase; Provisional

Probab=97.90  E-value=0.0001  Score=74.08  Aligned_cols=102  Identities=21%  Similarity=0.172  Sum_probs=72.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHH---CCCeEEEEecCCcHHH--HhhCC-CCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLML---RGYSVKALVRKADQEV--VDMLP-RSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~---~G~~V~~~~R~~~~~~--~~~~~-~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      |+|+|.||+|+||++++..|+.   .++++++++|++....  .+... .....+.+  .+.+++.+.++++|+||.+||
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            5899999999999999988854   3468888898743210  11111 11122333  223455677788999999999


Q ss_pred             CCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          236 ARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       236 ~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ....+   ..+.+..|......+++++.+++.+
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~  111 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPK  111 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            85433   3568999999999999999999876

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.86  E-value=4.7e-05  Score=78.72  Aligned_cols=76  Identities=17%  Similarity=0.246  Sum_probs=58.3

Q ss_pred             CCCCCEEEEECC---------------C-ChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHH-
Q 013761          158 GAQNTTVLVVGA---------------T-SRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL-  220 (437)
Q Consensus       158 ~l~~k~vLVTGA---------------t-G~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v-  220 (437)
                      ++.+++||||||               | |.+|.+++++|..+|++|+++.+....    ..+..+  ...|+++.+++ 
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~----~~~~~~--~~~~v~~~~~~~  255 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSL----LTPPGV--KSIKVSTAEEML  255 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCcc----CCCCCc--EEEEeccHHHHH
Confidence            378999999999               3 459999999999999999998876532    122222  45799998888 


Q ss_pred             HHHH----hcccEEEEeccCCCC
Q 013761          221 KAAV----ENCNKIIYCATARST  239 (437)
Q Consensus       221 ~~a~----~~~D~VIh~Ag~~~~  239 (437)
                      ++++    ..+|++|||||+...
T Consensus       256 ~~~~~~~~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       256 EAALNELAKDFDIFISAAAVADF  278 (390)
T ss_pred             HHHHHhhcccCCEEEEccccccc
Confidence            5444    246999999998643

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.78  E-value=0.00016  Score=73.08  Aligned_cols=96  Identities=16%  Similarity=0.157  Sum_probs=72.5

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcHHHHhhCCCCeEEEEecCCCHH-----------HHHHHH
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQEVVDMLPRSVEIVLGDVGDPC-----------TLKAAV  224 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~-----------~v~~a~  224 (437)
                      +|.|+||+|.||++++..|+..|.       +++++|+++..+       .......|+.|..           ...+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            589999999999999999998653       599999865421       1223344554443           446788


Q ss_pred             hcccEEEEeccCCCC---chhhHHHHHHHHHHHHHHHHHhcC-Cc
Q 013761          225 ENCNKIIYCATARST---ITGDLFRVDYQGVYNVTKAFQDFN-NK  265 (437)
Q Consensus       225 ~~~D~VIh~Ag~~~~---~~~~~~~vNv~gt~~l~~aa~~~g-vk  265 (437)
                      +++|+||++||....   .+.+.+..|+.-...+.+.+.++. .+
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~  118 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKD  118 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            899999999998543   256789999999999999998884 54

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.76  E-value=8.6e-05  Score=74.41  Aligned_cols=91  Identities=22%  Similarity=0.365  Sum_probs=70.6

Q ss_pred             EEEEECCCChHHHHHHHHHHH----CCCeEEEEecCCcH--HHHhh--------CCCCeEEEEecCCCHHHHHHHHhccc
Q 013761          163 TVLVVGATSRIGRIVIRKLML----RGYSVKALVRKADQ--EVVDM--------LPRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~----~G~~V~~~~R~~~~--~~~~~--------~~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      .++|.|||||-|..++++++.    .|....+..|+++.  +.++.        ++..+ ++.+|.+|++++.+.+..+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhhE
Confidence            589999999999999999999    78899999999762  22222        12334 88899999999999999999


Q ss_pred             EEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +|+||+|.....-+           .+++||.+.|..
T Consensus        86 vivN~vGPyR~hGE-----------~VVkacienG~~  111 (423)
T KOG2733|consen   86 VIVNCVGPYRFHGE-----------PVVKACIENGTH  111 (423)
T ss_pred             EEEeccccceecCc-----------HHHHHHHHcCCc
Confidence            99999997543222           356666665543

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.63  E-value=0.00022  Score=66.29  Aligned_cols=77  Identities=16%  Similarity=0.247  Sum_probs=47.5

Q ss_pred             CCCCEEEEECC----------------CChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHH
Q 013761          159 AQNTTVLVVGA----------------TSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA  222 (437)
Q Consensus       159 l~~k~vLVTGA----------------tG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~  222 (437)
                      |.||+||||+|                ||..|.+|++.++.+|++|+++.....-.    .+..+..+.  +...+++.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~----~p~~~~~i~--v~sa~em~~   74 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP----PPPGVKVIR--VESAEEMLE   74 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE---SSHHHHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc----ccccceEEE--ecchhhhhh
Confidence            35677777764                79999999999999999999998764311    134566554  445554444


Q ss_pred             ----HHhcccEEEEeccCCCCch
Q 013761          223 ----AVENCNKIIYCATARSTIT  241 (437)
Q Consensus       223 ----a~~~~D~VIh~Ag~~~~~~  241 (437)
                          .+..+|++||+|++....+
T Consensus        75 ~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   75 AVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHGGGGSEEEE-SB--SEEE
T ss_pred             hhccccCcceeEEEecchhheee
Confidence                4455799999999876544

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.60  E-value=0.00041  Score=67.77  Aligned_cols=91  Identities=18%  Similarity=0.235  Sum_probs=67.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARS  238 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~  238 (437)
                      |+|||+||||. |+.|++.|.+.|++|++..+..... ...  ......+..+..|.+++.+++..  +|+||+.+..  
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~--~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP--   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP--IHQALTVHTGALDPQELREFLKRHSIDILVDATHP--   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc--ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH--
Confidence            58999999998 9999999999999999999987531 111  11233455677788889888865  7999998743  


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                        +..      .-+.++.++|++.++.
T Consensus        76 --fA~------~is~~a~~a~~~~~ip   94 (256)
T TIGR00715        76 --FAA------QITTNATAVCKELGIP   94 (256)
T ss_pred             --HHH------HHHHHHHHHHHHhCCc
Confidence              222      2345788999998865

This enzyme was found to be a monomer by gel filtration.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.57  E-value=0.00011  Score=69.74  Aligned_cols=140  Identities=15%  Similarity=0.046  Sum_probs=104.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      -...++.|+.||.|+++++.....|+.|.++.|+.....++.....+.++.+|+...+-.+....+...++-++|-... 
T Consensus        52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn-  130 (283)
T KOG4288|consen   52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGN-  130 (283)
T ss_pred             HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccc-
Confidence            3478999999999999999999999999999998775566667788999999988877777788888888888875432 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCCc----------chhhhhhhhh-ccCCCCcceeeccCccc
Q 013761          241 TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGKS----------SKSKLLLAKF-KSADSLNGWEVRQGTYF  301 (437)
Q Consensus       241 ~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~~----------g~sk~~~~k~-v~~ssl~~~i~rP~~~~  301 (437)
                      ...+..+|-....+.++++.++|++ +.++++..+          -.+|..+|.. +........++|||..+
T Consensus       131 ~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiy  203 (283)
T KOG4288|consen  131 IILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIY  203 (283)
T ss_pred             hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCceeeccceee
Confidence            3456778888888999999999986 666665433          3344444332 22344566677777443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.56  E-value=0.00019  Score=63.10  Aligned_cols=76  Identities=18%  Similarity=0.307  Sum_probs=55.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcH--HHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQ--EVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~--~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.+++++|.|| |++|++++..|+..|++ |+++.|+.+.  +..+.+ ...+.++.  +   +++.+.+..+|+||++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~---~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--L---EDLEEALQEADIVINA   82 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--G---GGHCHHHHTESEEEE-
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--H---HHHHHHHhhCCeEEEe
Confidence            478999999998 99999999999999986 9999998662  222333 22344443  3   3455788889999999


Q ss_pred             ccCCCC
Q 013761          234 ATARST  239 (437)
Q Consensus       234 Ag~~~~  239 (437)
                      .+....
T Consensus        83 T~~~~~   88 (135)
T PF01488_consen   83 TPSGMP   88 (135)
T ss_dssp             SSTTST
T ss_pred             cCCCCc
Confidence            876544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.53  E-value=0.00085  Score=76.86  Aligned_cols=159  Identities=14%  Similarity=0.092  Sum_probs=97.1

Q ss_pred             chhhhhhHHHHHHHHHhhcCCCCccccCCCCchhhhhHhhhcC--CCCcc--CC-CCCCCCCEEEEECCCChHHHHHHHH
Q 013761          106 VGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKDSLDALLIRE--GPMCE--FA-IPGAQNTTVLVVGATSRIGRIVIRK  180 (437)
Q Consensus       106 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~-~~~l~~k~vLVTGAtG~IG~~la~~  180 (437)
                      +..+..+++.++++-.+++.|+.....................  .+..+  .. .....+|+|+|.|| |+||+.+++.
T Consensus       509 l~v~a~d~~~L~~i~~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIlVLGA-G~VG~~~a~~  587 (1042)
T PLN02819        509 LEVGADDKEVLDQIIDSLTRLANPNEDYISPAREANKIFLKIGKVQQENECNEKAEVTKKSQNVLILGA-GRVCRPAAEY  587 (1042)
T ss_pred             eecccCcHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhcccccccccccccccccCCcEEEECC-CHHHHHHHHH
Confidence            4566677788899999999888775432211111111111111  11111  11 11134679999997 9999999999


Q ss_pred             HHHCC-Ce-------------EEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch--hh
Q 013761          181 LMLRG-YS-------------VKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT--GD  243 (437)
Q Consensus       181 Ll~~G-~~-------------V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~--~~  243 (437)
                      |++.. ++             |++.+++.+. +.+...-.++..++.|++|.+++.++++++|+||++.....+..  ..
T Consensus       588 La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~~~DaVIsalP~~~H~~VAka  667 (1042)
T PLN02819        588 LASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVSQVDVVISLLPASCHAVVAKA  667 (1042)
T ss_pred             HHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhcCCCEEEECCCchhhHHHHHH
Confidence            98753 34             7777777543 11111113577899999999999999999999999986432110  00


Q ss_pred             ---------HHHHHHHHHHHHHHHHHhcCCc
Q 013761          244 ---------LFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       244 ---------~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                               .......-+..+.++++++|+.
T Consensus       668 AieaGkHvv~eky~~~e~~~L~e~Ak~AGV~  698 (1042)
T PLN02819        668 CIELKKHLVTASYVSEEMSALDSKAKEAGIT  698 (1042)
T ss_pred             HHHcCCCEEECcCCHHHHHHHHHHHHHcCCE
Confidence                     0112234456677788888866

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.52  E-value=0.00029  Score=70.19  Aligned_cols=75  Identities=19%  Similarity=0.325  Sum_probs=60.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      ..++|-||+||.|.-++++|+.+|.+-.+..|+...  .....++.+...+  ++.+++.+++.++++++|+||+|...
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~--p~~~p~~~~~~~~~~~VVlncvGPyt   83 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVF--PLGVPAALEAMASRTQVVLNCVGPYT   83 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcccccc--CCCCHHHHHHHHhcceEEEecccccc
Confidence            479999999999999999999999999999998763  2333454444444  44459999999999999999999754

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.48  E-value=0.00032  Score=73.58  Aligned_cols=73  Identities=23%  Similarity=0.327  Sum_probs=56.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHH---HhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEV---VDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~---~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +++|+|+|+|+++ +|.++++.|++.|++|++.+++.....   ...+ ..++.++.+|..+     +...++|+||+++
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~   76 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP   76 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence            6789999999877 999999999999999999999753211   1222 2256788888876     3456789999999


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      |+.
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            974

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.32  E-value=0.0031  Score=55.96  Aligned_cols=97  Identities=22%  Similarity=0.343  Sum_probs=69.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHHh--h----CCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVVD--M----LPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~~--~----~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      ++|.|.||+|.+|++++-.|+..+  .+++++|++.+.   ...+  .    ......+..   .+.    +.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc----cccccccEE
Confidence            589999999999999999999987  579999998542   1111  1    111222222   222    457788999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.+||....+   ..+.++.|..-...+.+.+.+++.+
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~  111 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPD  111 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCc
Confidence            9999975432   4568899999999999988776644

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.19  E-value=0.0014  Score=62.83  Aligned_cols=73  Identities=23%  Similarity=0.405  Sum_probs=58.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHH-hhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVV-DMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~-~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      |+++|.|+ |-+|+.+|+.|.+.|++|++++++.+.... ........++.+|-+|++.++++ ++.+|++|-.-+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            46778876 889999999999999999999998764111 11124678999999999999998 788899987654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.05  E-value=0.002  Score=67.49  Aligned_cols=72  Identities=19%  Similarity=0.344  Sum_probs=58.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      |+|+|.|+ |.+|+++++.|.+.|++|++++++.+. +.... ...+.++.+|.++.+.++++ ++++|.||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD-RLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh-hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            47999987 999999999999999999999997653 11111 23678999999999999988 788999988753

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.01  E-value=0.0015  Score=58.10  Aligned_cols=74  Identities=16%  Similarity=0.161  Sum_probs=51.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++++|+|+ |++|..+++.|++.| ++|++.+|+.+.  +..+.+...  .+..+..+.   .++++++|+||++..
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~Dvvi~~~~   90 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL--GIAIAYLDL---EELLAEADLIINTTP   90 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc--ccceeecch---hhccccCCEEEeCcC
Confidence            45789999998 999999999999996 789999998653  122222211  122344443   344788999999987


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      ...
T Consensus        91 ~~~   93 (155)
T cd01065          91 VGM   93 (155)
T ss_pred             CCC
Confidence            644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.98  E-value=0.0046  Score=62.47  Aligned_cols=101  Identities=13%  Similarity=0.133  Sum_probs=69.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcHH-----HHhhCCCCeEEE-EecCCCHHHHHHHHhccc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQE-----VVDMLPRSVEIV-LGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~~-----~~~~~~~~v~~v-~~Dltd~~~v~~a~~~~D  228 (437)
                      ++|.|+||+|.||..++..|+..|.       +++++|.....+     ..+.......+. ...++  ....+.++++|
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~daD   80 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDAD   80 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCCC
Confidence            4899999999999999999998884       799999854311     111110000000 01111  12356788899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCC
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNN  264 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gv  264 (437)
                      +||.+||....+   -.+.+..|+.-...+.+.+.+++.
T Consensus        81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~  119 (322)
T cd01338          81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVAS  119 (322)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            999999985432   356899999999999999988874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.90  E-value=0.004  Score=62.38  Aligned_cols=96  Identities=17%  Similarity=0.227  Sum_probs=68.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH--HHhhC-------CCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE--VVDML-------PRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~--~~~~~-------~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      ++|.|.|+ |++|+.++..|+..|  .+|++++++.+..  ....+       .....+..   .+.    +.++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence            37899986 999999999999999  5899999987621  11111       11222221   222    246789999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |+++|....+   -.+.+..|..-...+.+.+++++.+
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~  110 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFD  110 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999975432   3468899999999999999888765

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.89  E-value=0.0025  Score=62.87  Aligned_cols=74  Identities=20%  Similarity=0.311  Sum_probs=50.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.+++++|+|+ |++|++++..|+..| .+|++++|+.+.  ...+.+..... +..++    +..+.+.++|+|||+.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~~~~~~~~DivInaT  193 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AELDL----ELQEELADFDLIINAT  193 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cchhccccCCEEEECC
Confidence            367889999997 999999999999999 799999998653  12222221100 11111    2235667789999997


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      ...
T Consensus       194 p~g  196 (278)
T PRK00258        194 SAG  196 (278)
T ss_pred             cCC
Confidence            654

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.85  E-value=0.005  Score=61.81  Aligned_cols=100  Identities=17%  Similarity=0.216  Sum_probs=67.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHHHHh----hCCC-----CeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQEVVD----MLPR-----SVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~~~~----~~~~-----~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|+||+|.+|..++..|+..|.  +|++++|+...+.++    .+.+     ... .....+  .+. +.+.++|+|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~--~d~-~~l~~aDiV   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKIS--SDL-SDVAGSDIV   76 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEEC--CCH-HHhCCCCEE
Confidence            5899999999999999999999986  599999954211110    0000     111 011112  112 348899999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |-++|.....   ..+.+..|+.-...+++.+.++..+
T Consensus        77 iitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~  114 (309)
T cd05294          77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPD  114 (309)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999975432   2557888999999999888777654

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.85  E-value=0.0063  Score=61.14  Aligned_cols=102  Identities=20%  Similarity=0.168  Sum_probs=71.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCc-HHHHhhCC--CCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKAD-QEVVDMLP--RSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~-~~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++|.|+|++|.+|++++-.|+..|  .+++++|.+.. .+..+...  ....+...  ...+++.+.++++|+||-+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEeCCC
Confidence            489999999999999999999888  47999998721 11111111  11122111  0113356788999999999998


Q ss_pred             CCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          237 RSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       237 ~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ...+   -.+.+..|..-...+++.+.+++.+
T Consensus        79 ~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~  110 (310)
T cd01337          79 PRKPGMTRDDLFNINAGIVRDLATAVAKACPK  110 (310)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            5432   3568999999999999999888765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.82  E-value=0.0077  Score=63.15  Aligned_cols=75  Identities=20%  Similarity=0.226  Sum_probs=51.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-CCCeEEEEecCCCHHHHHHHHh-cccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-PRSVEIVLGDVGDPCTLKAAVE-NCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-~~~v~~v~~Dltd~~~v~~a~~-~~D~VIh~A  234 (437)
                      +.+|+|+|||+++ +|.++++.|++.|++|++.+++...  .....+ ..++.+..++.  ...   .+. ++|+||+++
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~---~~~~~~d~vV~s~   76 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLE---LLDEDFDLMVKNP   76 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHH---HhcCcCCEEEECC
Confidence            5689999999976 9999999999999999999976531  111212 22444443332  222   233 389999999


Q ss_pred             cCCCC
Q 013761          235 TARST  239 (437)
Q Consensus       235 g~~~~  239 (437)
                      |+...
T Consensus        77 gi~~~   81 (447)
T PRK02472         77 GIPYT   81 (447)
T ss_pred             CCCCC
Confidence            98644

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.81  E-value=0.011  Score=59.92  Aligned_cols=101  Identities=13%  Similarity=0.141  Sum_probs=69.6

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCc-----HHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKAD-----QEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~-----~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      +|.|+||+|++|++++-.|+..|.       +++++|....     .+..+.......+. .++.-.....+.++++|+|
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~~~~~~~~~daDvV   83 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLL-AGVVATTDPEEAFKDVDAA   83 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccccc-CCcEEecChHHHhCCCCEE
Confidence            899999999999999999998884       7999998542     11111111110010 0111112334678889999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCC
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNN  264 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gv  264 (437)
                      |.+||....+   -.+.+..|..-...+.+.+.++..
T Consensus        84 VitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~  120 (323)
T TIGR01759        84 LLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK  120 (323)
T ss_pred             EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999985422   456899999999999999988876

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF08547 CIA30: Complex I intermediate-associated protein 30 (CIA30); InterPro: IPR013857 Mitochondrial complex I intermediate-associated protein 30 (CIA30) is present in human and mouse, and also in Schizosaccharomyces pombe (Fission yeast) which does not contain the NADH dehydrogenase component of complex I, or many of the other essential subunits

Probab=96.79  E-value=8.8e-05  Score=67.00  Aligned_cols=110  Identities=35%  Similarity=0.609  Sum_probs=78.0

Q ss_pred             ccceeeeeeecc--CccceeccccCCCcccHHHHHHHHHHHhccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC-Cce
Q 013761          323 GDAVFSGYVFTR--GGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVG-FCR  399 (437)
Q Consensus       323 ~~~v~~g~~~~~--~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G-~~~  399 (437)
                      ....+.|.+...  +|++.++... .......+.++++.+.+.++|+.|.+++.+........+   ...+....| |.+
T Consensus        35 ~~~~F~G~ls~~~~~GFa~~r~~~-~~~~~dls~y~~l~l~vrgdGr~Y~~~l~~~~~~~~~~y---~~~f~t~~~~w~~  110 (157)
T PF08547_consen   35 GSAVFSGNLSTENNGGFASVRTPS-FPSPLDLSGYDGLELRVRGDGRTYKVNLRTDNDEPSDSY---QARFQTPPGEWQT  110 (157)
T ss_pred             CEEEEEEEEecCCCCceEEEEEcc-CCCcCCCCCCcEEEEEEEcCCceEEEEEEeCCCCCCceE---EEEEeccCCccEE
Confidence            445667777655  7888877611 111235678899999999999999999998754333222   333333344 999


Q ss_pred             ecccCCCcccCC-----CCCCCCCHHHHhhccceeecccCCC
Q 013761          400 VRVPFSSFRPVK-----PDDPPMDPFLVHTMTIRFEPRRQVF  436 (437)
Q Consensus       400 v~iP~~~~r~~~-----~~~~~ld~~ki~~~gi~fep~~~~~  436 (437)
                      ++|||..|.|..     +..++||+.+|+++|+....+.+.+
T Consensus       111 v~iPFs~F~~~~rG~~v~~~~~l~~~~I~~ig~~~~~~~~G~  152 (157)
T PF08547_consen  111 VRIPFSDFVPTFRGRPVDDAPPLDPSRIRSIGFMISDKQEGP  152 (157)
T ss_pred             EEEEHHHCceeeCCcccCCCCCcChHHceEEEEEEecCCCCC
Confidence            999999998873     3567899999999999988776554

This means it is possible that it is not directly involved in oxidative phosphorylation [, ].

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.76  E-value=0.0088  Score=60.26  Aligned_cols=98  Identities=15%  Similarity=0.173  Sum_probs=70.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH--HHHhhCC------CCeEEEEecCCCHHHHHHHHhcccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ--EVVDMLP------RSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~--~~~~~~~------~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      .+++|.|+|+ |.||.+++..|+..|.  +++++|++.+.  ....++.      ..+.+..   .+    .+.++++|+
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~----~~~~~~adi   76 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD----YSDCKDADL   76 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC----HHHhCCCCE
Confidence            3569999998 9999999999999986  79999997652  1111111      1222221   12    245789999


Q ss_pred             EEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          230 IIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       230 VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ||..||....+   ..+.+..|..-...+++.+.+++.+
T Consensus        77 vIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~  115 (315)
T PRK00066         77 VVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFD  115 (315)
T ss_pred             EEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999985432   3568899999999999988887765

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.72  E-value=0.0062  Score=55.80  Aligned_cols=60  Identities=20%  Similarity=0.257  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .++.+++|+|.|++..+|..+++.|.++|++|+++.|+.                      +++.+.+.++|+||.+.+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence            358899999999976789999999999999999998852                      3456788889999999876


Q ss_pred             CC
Q 013761          237 RS  238 (437)
Q Consensus       237 ~~  238 (437)
                      ..
T Consensus        98 ~~   99 (168)
T cd01080          98 PG   99 (168)
T ss_pred             Cc
Confidence            43

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.68  E-value=0.0077  Score=62.03  Aligned_cols=75  Identities=13%  Similarity=0.148  Sum_probs=57.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHH-hhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVV-DMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~-~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +..++|+|.|+ |.+|+.+++.|...|++|++++|+.+. +.. .....   .+..+..+.+.+.+++.++|+||+++++
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~---~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG---RIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc---eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            45678999987 899999999999999999999987653 111 22222   2334667788889999999999999865


Q ss_pred             C
Q 013761          237 R  237 (437)
Q Consensus       237 ~  237 (437)
                      .
T Consensus       241 ~  241 (370)
T TIGR00518       241 P  241 (370)
T ss_pred             C
Confidence            3

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.67  E-value=0.012  Score=58.84  Aligned_cols=58  Identities=14%  Similarity=0.233  Sum_probs=49.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|.|.|.++-+|+.++..|+++|++|+++.+...                      ++++++..+|+||-+.|..
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------~l~e~~~~ADIVIsavg~~  213 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------DAKALCRQADIVVAAVGRP  213 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEecCCh
Confidence            488999999999999999999999999999999976532                      3556777889999988754

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.64  E-value=0.0067  Score=60.31  Aligned_cols=70  Identities=17%  Similarity=0.198  Sum_probs=52.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++.+++++|.|. |.+|+.+++.|...|++|++.+|+.+.. .....  ....+     +.+++.+++.++|+||++..
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~--g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEM--GLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC--CCeee-----cHHHHHHHhccCCEEEECCC
Confidence            478899999998 8899999999999999999999986531 11111  12211     24557778889999999863

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05442 malate dehydrogenase; Provisional

Probab=96.62  E-value=0.015  Score=58.86  Aligned_cols=100  Identities=13%  Similarity=0.111  Sum_probs=67.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcH-----HHHhhCCCCeEEE-EecCCCHHHHHHHHhccc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQ-----EVVDMLPRSVEIV-LGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~-----~~~~~~~~~v~~v-~~Dltd~~~v~~a~~~~D  228 (437)
                      ++|.|+||+|.+|+.++-.|+..|.       +++++|++...     +..+.......+. ...++  ....+.++++|
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~daD   82 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKDAD   82 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCCCC
Confidence            5899999999999999999988773       79999985431     1111000000000 00111  12346788899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      +||-+||....+   -.+.+..|..-...+.+.+.++.
T Consensus        83 iVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  120 (326)
T PRK05442         83 VALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA  120 (326)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999975422   35689999999999999998855

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.58  E-value=0.011  Score=60.30  Aligned_cols=75  Identities=20%  Similarity=0.300  Sum_probs=53.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh----cccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~A  234 (437)
                      .++.|||.||+|++|++.++.+...| ..|+........+..+.++...   ..|..+++.++...+    ++|+|+.|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~---vvdy~~~~~~e~~kk~~~~~~DvVlD~v  233 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADE---VVDYKDENVVELIKKYTGKGVDVVLDCV  233 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcE---eecCCCHHHHHHHHhhcCCCccEEEECC
Confidence            57899999999999999999888889 4455444443345555664322   257777666555555    479999999


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      |-.
T Consensus       234 g~~  236 (347)
T KOG1198|consen  234 GGS  236 (347)
T ss_pred             CCC
Confidence            863

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.58  E-value=0.005  Score=62.51  Aligned_cols=69  Identities=20%  Similarity=0.332  Sum_probs=46.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCe---EEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYS---VKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~---V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +++|+|.||||++|++|++.|.++|+.   +.++.+..+. +... +. .......|+.+.     .++++|+||.++|.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-~~-g~~i~v~d~~~~-----~~~~vDvVf~A~g~   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-FK-GKELKVEDLTTF-----DFSGVDIALFSAGG   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-eC-CceeEEeeCCHH-----HHcCCCEEEECCCh
Confidence            368999999999999999999998864   4677665432 1111 11 133444566432     34689999998764

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.50  E-value=0.012  Score=59.13  Aligned_cols=101  Identities=21%  Similarity=0.218  Sum_probs=69.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH-HHHh--hCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ-EVVD--MLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~-~~~~--~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +|.|+||+|.||++++-.|+..|.  +++++|++... +..+  .......+....  +.+++.+.++++|+||.+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCCC
Confidence            588999999999999999998874  79999987621 1111  111111111101  1123567889999999999985


Q ss_pred             CCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          238 STI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       238 ~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ..+   ..+.+..|..-...+.+.+.+++.+
T Consensus        79 ~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~  109 (312)
T TIGR01772        79 RKPGMTRDDLFNVNAGIVKDLVAAVAESCPK  109 (312)
T ss_pred             CCCCccHHHHHHHhHHHHHHHHHHHHHhCCC
Confidence            432   3568999999888999988888765

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.48  E-value=0.038  Score=56.28  Aligned_cols=96  Identities=20%  Similarity=0.195  Sum_probs=66.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc-------------H-------------HHHhhCCC--CeEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD-------------Q-------------EVVDMLPR--SVEI  209 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~-------------~-------------~~~~~~~~--~v~~  209 (437)
                      +..++|+|.|+ |++|+++++.|+..|. +++++|++.-             .             +.+..+..  .++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            56789999987 8899999999999997 8899998641             0             11112222  4566


Q ss_pred             EEecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceee
Q 013761          210 VLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQ  268 (437)
Q Consensus       210 v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~  268 (437)
                      +..|++ .+.++++++++|+||.+..    .+.        .-+.+.+++.+.++.+.+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D----~~~--------~r~~in~~~~~~~ip~i~  146 (338)
T PRK12475        101 VVTDVT-VEELEELVKEVDLIIDATD----NFD--------TRLLINDLSQKYNIPWIY  146 (338)
T ss_pred             EeccCC-HHHHHHHhcCCCEEEEcCC----CHH--------HHHHHHHHHHHcCCCEEE
Confidence            677775 4578888999999998752    111        123455777777766433

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.47  E-value=0.0081  Score=56.48  Aligned_cols=67  Identities=15%  Similarity=0.276  Sum_probs=47.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-cccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-NCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-~~D~VIh~A  234 (437)
                      ++.+|+++|+|. |.+|+++++.|.+.|++|++.+++.+.  .....+  ....+  |.      ++++. .+|+++.+|
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~--g~~~v--~~------~~l~~~~~Dv~vp~A   93 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF--GATVV--AP------EEIYSVDADVFAPCA   93 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc--CCEEE--cc------hhhccccCCEEEecc
Confidence            378899999998 689999999999999999999887652  111222  12222  22      12332 689999887


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      .
T Consensus        94 ~   94 (200)
T cd01075          94 L   94 (200)
T ss_pred             c
Confidence            5

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.46  E-value=0.0072  Score=59.37  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=48.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCC--CeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPR--SVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~--~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ..+++++|+|+ |++|++++..|++.|++|++++|+.+.  +..+.+..  .+...  ++.+     .....+|+|||+.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInat  186 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINAT  186 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECC
Confidence            35789999998 899999999999999999999998652  12222211  12222  1111     1234689999998


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      +..
T Consensus       187 p~g  189 (270)
T TIGR00507       187 SAG  189 (270)
T ss_pred             CCC
Confidence            764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.42  E-value=0.012  Score=58.86  Aligned_cols=68  Identities=22%  Similarity=0.263  Sum_probs=51.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +.+++++|.|+ |.+|+.++..|...|++|++++|+.+.. .....  ...++     +.+++.+.+.++|+||+++
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~--G~~~~-----~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEM--GLSPF-----HLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc--CCeee-----cHHHHHHHhCCCCEEEECC
Confidence            57899999997 8899999999999999999999986532 12222  22222     2356677888999999986

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.41  E-value=0.014  Score=61.70  Aligned_cols=77  Identities=19%  Similarity=0.241  Sum_probs=56.6

Q ss_pred             CCCCCEEEEECC----------------CChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHH
Q 013761          158 GAQNTTVLVVGA----------------TSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK  221 (437)
Q Consensus       158 ~l~~k~vLVTGA----------------tG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~  221 (437)
                      +|.||+||||+|                ||-.|.+|++.+..+|++|+++.-....    ..+..+.++.  +...+++.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~----~~p~~v~~i~--V~ta~eM~  326 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL----ADPQGVKVIH--VESARQML  326 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC----CCCCCceEEE--ecCHHHHH
Confidence            489999999986                7899999999999999999998743221    1234566554  44566666


Q ss_pred             HHHhc---ccEEEEeccCCCCc
Q 013761          222 AAVEN---CNKIIYCATARSTI  240 (437)
Q Consensus       222 ~a~~~---~D~VIh~Ag~~~~~  240 (437)
                      +++..   .|++|++|++....
T Consensus       327 ~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        327 AAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHhhCCCCEEEEecccccee
Confidence            55543   59999999986543

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.39  E-value=0.014  Score=57.00  Aligned_cols=102  Identities=16%  Similarity=0.118  Sum_probs=69.4

Q ss_pred             EEEECCCChHHHHHHHHHHHCC----CeEEEEecCCcH--HHHhhCCCCeEE-EEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          164 VLVVGATSRIGRIVIRKLMLRG----YSVKALVRKADQ--EVVDMLPRSVEI-VLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G----~~V~~~~R~~~~--~~~~~~~~~v~~-v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      |.|.||+|.+|..++..|+..|    .+|+++|++.+.  ....++..-... ....+.-.+++.++++++|+||..+|.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5789999999999999999998    789999987652  111111100000 111222223456788999999999987


Q ss_pred             CCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          237 RSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       237 ~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ....   .......|+.-...+++.+.++..+
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~  112 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPD  112 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            5432   2346777888888899988887755

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.39  E-value=0.064  Score=57.70  Aligned_cols=105  Identities=19%  Similarity=0.222  Sum_probs=73.0

Q ss_pred             CCCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecCCcHHHH---hhC-------CCCeEEEEecCCCHHHHHHHHhcc
Q 013761          159 AQNTTVLVVGAT-SRIGRIVIRKLMLRGYSVKALVRKADQEVV---DML-------PRSVEIVLGDVGDPCTLKAAVENC  227 (437)
Q Consensus       159 l~~k~vLVTGAt-G~IG~~la~~Ll~~G~~V~~~~R~~~~~~~---~~~-------~~~v~~v~~Dltd~~~v~~a~~~~  227 (437)
                      ...+.+|||||+ |.||.+++.+|++.|++|++...+-+.+..   +.+       ...+-++..+.....+++.+++-+
T Consensus       394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            677899999998 899999999999999999998766543211   111       235677888998888888887632


Q ss_pred             ---------------------cEEEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          228 ---------------------NKIIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       228 ---------------------D~VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                                           |.+|-.|++....        .+-.+++-+....+++-.+++.+
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~  538 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQG  538 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhc
Confidence                                 6777777763211        22245555555666666665544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.37  E-value=0.013  Score=57.95  Aligned_cols=73  Identities=22%  Similarity=0.281  Sum_probs=48.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+++|+||+|.+|.++++.+...|++|++++++.+. +........ .++  |..+ .+.+.+. .++|+||+++|.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~-~~~d~v~~~~g~  236 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGAD-YVI--DGSKFSEDVKKL-GGADVVIELVGS  236 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCc-EEE--ecHHHHHHHHhc-cCCCEEEECCCh
Confidence            46799999999999999999999999999999886542 222222211 122  2221 1222222 268999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.36  E-value=0.16  Score=49.94  Aligned_cols=103  Identities=16%  Similarity=0.130  Sum_probs=69.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeE---EEEecCCcH---HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSV---KALVRKADQ---EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V---~~~~R~~~~---~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      .+-+|.|.||+||||+-|.- |++....|   .+.|.....   ..+..+...  ......+-.+.++++++++|+||--
T Consensus        27 ~~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~--s~V~g~~g~~~L~~al~~advVvIP  103 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPGVAADLSHINTN--SSVVGFTGADGLENALKGADVVVIP  103 (345)
T ss_pred             CcceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCcccccccccCCC--CceeccCChhHHHHHhcCCCEEEec
Confidence            34589999999999999975 55555433   444443221   111112111  1123444467899999999999999


Q ss_pred             ccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          234 ATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       234 Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ||+...+   .++.|++|..-...+..++.+.-.+
T Consensus       104 AGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~  138 (345)
T KOG1494|consen  104 AGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPN  138 (345)
T ss_pred             CCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCcc
Confidence            9986543   5779999988888888888765543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.011  Score=58.74  Aligned_cols=57  Identities=16%  Similarity=0.199  Sum_probs=47.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++.+|+|+|.|++|.+|+.++..|+.+|++|+++.|..                      ..+.+.+.++|+||++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVGK  212 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccCC
Confidence            47899999999999999999999999999999887732                      1244555788999999974

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.32  E-value=0.02  Score=57.49  Aligned_cols=98  Identities=20%  Similarity=0.300  Sum_probs=69.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH--HHhhCCCCe------EEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE--VVDMLPRSV------EIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~--~~~~~~~~v------~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++|.|+|| |+||+.++-.|+.++  -+++++|+..+..  ...++....      ..+.+| .|    .+.++++|+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            47999999 999999999998876  3899999984411  011111111      122222 22    45678899999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      -.||....+   -.+.++.|..-...+.+...+++.+
T Consensus        75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d  111 (313)
T COG0039          75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPD  111 (313)
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCC
Confidence            999986543   3568999999999999998888765

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.31  E-value=0.0041  Score=64.26  Aligned_cols=75  Identities=15%  Similarity=0.316  Sum_probs=49.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag~  236 (437)
                      +.++|.|.||||.+|++|++.|+.+ +.+|..+.++.+. +.....  ...+...|+.+.++++.. ++++|+||.+.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~--~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV--FPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh--CccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            4569999999999999999999998 6899988875331 111111  112222444433333332 5789999997753

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.31  E-value=0.015  Score=61.03  Aligned_cols=75  Identities=24%  Similarity=0.356  Sum_probs=58.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~A  234 (437)
                      ...++++|.|+ |.+|+.+++.|.+.|++|++++++++. +........+.++.+|.++.+.++++ ++.+|.||-+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALT  305 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence            45689999998 999999999999999999999988763 12222223577899999999988654 46679887654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.25  E-value=0.03  Score=55.91  Aligned_cols=57  Identities=14%  Similarity=0.239  Sum_probs=47.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-cCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALV-RKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~-R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++.||+|+|.|.++.+|+.++..|+++|++|+++. |..                       +++++++.+|+||-+.|.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-----------------------~l~e~~~~ADIVIsavg~  211 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-----------------------DLPAVCRRADILVAAVGR  211 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-----------------------CHHHHHhcCCEEEEecCC
Confidence            47899999999999999999999999999999984 432                       135677788999998875


Q ss_pred             C
Q 013761          237 R  237 (437)
Q Consensus       237 ~  237 (437)
                      .
T Consensus       212 ~  212 (296)
T PRK14188        212 P  212 (296)
T ss_pred             h
Confidence            3

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.22  E-value=0.052  Score=55.28  Aligned_cols=96  Identities=21%  Similarity=0.295  Sum_probs=66.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc-------------H-------------HHHhhCCC--CeEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD-------------Q-------------EVVDMLPR--SVEI  209 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~-------------~-------------~~~~~~~~--~v~~  209 (437)
                      +..++|+|.|+ |+||+.+++.|+..|. +|+++|.+.-             .             +.+..+..  .+..
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            56779999988 9999999999999997 8999998631             0             01122222  3556


Q ss_pred             EEecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceee
Q 013761          210 VLGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQ  268 (437)
Q Consensus       210 v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~  268 (437)
                      +..+++ .+.+.++++++|+||.+..            |...-..+.++|.+.++.+.+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D------------n~~~r~~ln~~~~~~~iP~i~  146 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATD------------NFETRFIVNDAAQKYGIPWIY  146 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCC------------CHHHHHHHHHHHHHhCCCEEE
Confidence            666775 4567788899999998742            122234566788888866443

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.21  E-value=0.016  Score=57.39  Aligned_cols=59  Identities=15%  Similarity=0.289  Sum_probs=50.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|+++-+|+-++..|+.+|++|+++.++.                      ..+.+.+..+|+||.++|..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~p  212 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGKP  212 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCCC
Confidence            48899999999999999999999999999999987642                      23667888899999998864


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       213 ~  213 (286)
T PRK14175        213 G  213 (286)
T ss_pred             c
Confidence            3

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.20  E-value=0.018  Score=53.03  Aligned_cols=70  Identities=24%  Similarity=0.316  Sum_probs=50.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHH-HhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEV-VDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~-~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+++|.|.|. |.||+++++.|..-|.+|+..+|...... ....  .+        ...+++++++.+|+|+.+.-.
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~--~~--------~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEF--GV--------EYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHT--TE--------EESSHHHHHHH-SEEEE-SSS
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccc--cc--------eeeehhhhcchhhhhhhhhcc
Confidence            478999999966 99999999999999999999999876432 1111  11        123566788899999988865


Q ss_pred             CC
Q 013761          237 RS  238 (437)
Q Consensus       237 ~~  238 (437)
                      +.
T Consensus       102 t~  103 (178)
T PF02826_consen  102 TP  103 (178)
T ss_dssp             ST
T ss_pred             cc
Confidence            43

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.19  E-value=0.013  Score=63.09  Aligned_cols=72  Identities=15%  Similarity=0.144  Sum_probs=48.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHH-hcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAV-ENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~-~~~D~VIh~A  234 (437)
                      ++.+|+++|+|| ||+|++++..|++.|++|++++|+.+.  .....+...  .  .++   +++.+.. ...|+|||+.
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~--~--~~~---~~~~~~~~~~~diiINtT  447 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ--A--LTL---ADLENFHPEEGMILANTT  447 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc--e--eeH---hHhhhhccccCeEEEecc
Confidence            467899999999 799999999999999999999987542  122222211  1  122   2222222 3468899887


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      .+.
T Consensus       448 ~vG  450 (529)
T PLN02520        448 SVG  450 (529)
T ss_pred             cCC
Confidence            654

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.15  E-value=0.022  Score=58.07  Aligned_cols=94  Identities=11%  Similarity=0.083  Sum_probs=54.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCc-HHHHhhCCCCeEEE-EecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKAD-QEVVDMLPRSVEIV-LGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~-~~~~~~~~~~v~~v-~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +++|+|.||||.+|+++++.|++. +++++++.++.+ .+........+..+ ..++.+.+..  .++++|+||.|....
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~   79 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG   79 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH
Confidence            469999999999999999999986 678877665332 11111111111111 1233333332  456799999876421


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCceeee
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNKLAQL  269 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l  269 (437)
                                   ....++.++.++|+++.-+
T Consensus        80 -------------~~~~~v~~a~~aG~~VID~   98 (343)
T PRK00436         80 -------------VSMDLAPQLLEAGVKVIDL   98 (343)
T ss_pred             -------------HHHHHHHHHHhCCCEEEEC
Confidence                         1234555666677654433

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.13  E-value=0.019  Score=60.00  Aligned_cols=76  Identities=14%  Similarity=0.257  Sum_probs=55.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.+++|+|.|+ |++|+.+++.|+..|. +|+++.|+.+.  .....++. .     .+...+++.+++..+|+||++-
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-~-----~~~~~~~l~~~l~~aDiVI~aT  250 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-A-----SAHYLSELPQLIKKADIIIAAV  250 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-C-----eEecHHHHHHHhccCCEEEECc
Confidence            477899999988 9999999999999995 78888887652  12222221 1     2223456778888999999998


Q ss_pred             cCCCCc
Q 013761          235 TARSTI  240 (437)
Q Consensus       235 g~~~~~  240 (437)
                      +...+.
T Consensus       251 ~a~~~v  256 (414)
T PRK13940        251 NVLEYI  256 (414)
T ss_pred             CCCCee
Confidence            765443

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.10  E-value=0.038  Score=55.75  Aligned_cols=104  Identities=11%  Similarity=0.163  Sum_probs=68.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH---HHHhhCC-CCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ---EVVDMLP-RSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~---~~~~~~~-~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ..++|.|.|| |.+|+.++..|+..| .+|+++|++.+.   ...+... ....-....+....+.+ .++++|+||.+|
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            4568999997 999999999999988 789999997652   1111110 00000001111112234 678999999999


Q ss_pred             cCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          235 TARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       235 g~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.....   ..+.+..|..-...+++.+.++..+
T Consensus        82 g~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~  115 (319)
T PTZ00117         82 GVQRKEEMTREDLLTINGKIMKSVAESVKKYCPN  115 (319)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            875432   3457788887777888888777654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.09  E-value=0.012  Score=58.51  Aligned_cols=70  Identities=19%  Similarity=0.234  Sum_probs=48.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCC---CCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLP---RSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~---~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +.+++|+|.|+ ||.|++++..|+..|. +|++++|+.+.  ...+.+.   ....+..  .   +++.+.+.++|+|||
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~~~aDiVIn  198 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAAALAAADGLVH  198 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHhhhCCCCEEEE
Confidence            56789999987 8899999999999997 79999998652  1222221   1122221  1   234456678899999


Q ss_pred             ec
Q 013761          233 CA  234 (437)
Q Consensus       233 ~A  234 (437)
                      +-
T Consensus       199 aT  200 (284)
T PRK12549        199 AT  200 (284)
T ss_pred             CC
Confidence            93

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.09  E-value=0.042  Score=54.46  Aligned_cols=59  Identities=24%  Similarity=0.366  Sum_probs=49.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-|+..|+.+|++|+++.+...                      .+++.+..+|+||.++|..
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~----------------------~l~~~~~~ADIvi~avG~p  213 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK----------------------NLRHHVRNADLLVVAVGKP  213 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC----------------------CHHHHHhhCCEEEEcCCCc
Confidence            478999999999999999999999999999998875421                      2567778889999999864


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       214 ~  214 (285)
T PRK10792        214 G  214 (285)
T ss_pred             c
Confidence            4

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.09  E-value=0.022  Score=47.98  Aligned_cols=69  Identities=29%  Similarity=0.542  Sum_probs=51.9

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      |+|.|. |.+|+.+++.|.+.+.+|++++++++. +...  ...+.++.+|.+|++.++++ ++.++.||-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR--EEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH--HTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH--hcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            567777 689999999999987899999998763 1222  23488999999999998875 356788887653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.07  E-value=0.034  Score=55.07  Aligned_cols=59  Identities=15%  Similarity=0.186  Sum_probs=48.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-++..|+.+|+.|+++....                      .++.+.++.+|+||-++|..
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t----------------------~~l~~~~~~ADIvV~AvG~p  211 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT----------------------KDLSFYTQNADIVCVGVGKP  211 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc----------------------HHHHHHHHhCCEEEEecCCC
Confidence            47899999999999999999999999999998874321                      23567788889999998765


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       212 ~  212 (285)
T PRK14191        212 D  212 (285)
T ss_pred             C
Confidence            4

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.02  E-value=0.027  Score=59.24  Aligned_cols=97  Identities=16%  Similarity=0.161  Sum_probs=69.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC-------CC--eEEEEecCCcH---HHHhhCC------CCeEEEEecCCCHHHHHHH
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR-------GY--SVKALVRKADQ---EVVDMLP------RSVEIVLGDVGDPCTLKAA  223 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~-------G~--~V~~~~R~~~~---~~~~~~~------~~v~~v~~Dltd~~~v~~a  223 (437)
                      -+|.|+|++|.||.+++-.|+..       |.  ++++++++.+.   +..+...      ..+.+..   .|    .+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~---~~----ye~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI---DP----YEV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec---CC----HHH
Confidence            38999999999999999999988       64  78899988762   1111111      1221111   12    367


Q ss_pred             HhcccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHh-cCCc
Q 013761          224 VENCNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQD-FNNK  265 (437)
Q Consensus       224 ~~~~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~-~gvk  265 (437)
                      ++++|+||-.||....+   -.+.++.|+.-...+.+.+.+ ++..
T Consensus       174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~  219 (444)
T PLN00112        174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRN  219 (444)
T ss_pred             hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            88899999999985432   346899999999999999988 5654

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.00  E-value=0.032  Score=55.63  Aligned_cols=73  Identities=19%  Similarity=0.182  Sum_probs=48.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC---HHH-HHHHH-hcccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD---PCT-LKAAV-ENCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd---~~~-v~~a~-~~~D~VIh~  233 (437)
                      .+.+|||+||+|++|..+++.+...|++|++++++.+. +....++... ++  |..+   ... +.... .++|++|.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~-vi--~~~~~~~~~~~~~~~~~~gvdvv~d~  214 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDV-AF--NYKTVKSLEETLKKASPDGYDCYFDN  214 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EE--eccccccHHHHHHHhCCCCeEEEEEC
Confidence            46799999999999999998888899999998887653 2333443321 22  2222   222 22222 247999998


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      .|
T Consensus       215 ~G  216 (325)
T TIGR02825       215 VG  216 (325)
T ss_pred             CC
Confidence            76

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.99  E-value=0.026  Score=59.17  Aligned_cols=74  Identities=20%  Similarity=0.321  Sum_probs=54.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.+++|+|.|+ |.+|+.+++.|...|+ +|++++|+.+.  .....++.       ++.+.+++.+++.++|+||.+.
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~-------~~~~~~~~~~~l~~aDvVI~aT  250 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG-------EAIPLDELPEALAEADIVISST  250 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-------cEeeHHHHHHHhccCCEEEECC
Confidence            367889999987 9999999999999997 79999997653  12233321       2223456677788899999997


Q ss_pred             cCCCC
Q 013761          235 TARST  239 (437)
Q Consensus       235 g~~~~  239 (437)
                      +...+
T Consensus       251 ~s~~~  255 (423)
T PRK00045        251 GAPHP  255 (423)
T ss_pred             CCCCc
Confidence            75443

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.97  E-value=0.022  Score=56.39  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=51.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++++|.|+ ||.|++++..|++.|. +|+++.|+.+.  ...+.+.......  .+...+++...+.++|+|||+-.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~--~~~~~~~~~~~~~~~DiVInaTp  199 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVIT--RLEGDSGGLAIEKAAEVLVSTVP  199 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcce--eccchhhhhhcccCCCEEEECCC
Confidence            56789999977 9999999999999996 79999998652  1222222111111  12222334455677899999976


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      ...
T Consensus       200 ~g~  202 (282)
T TIGR01809       200 ADV  202 (282)
T ss_pred             CCC
Confidence            543

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.94  E-value=0.15  Score=47.92  Aligned_cols=96  Identities=17%  Similarity=0.229  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc---H---------------------HHHhhCCCC--eEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD---Q---------------------EVVDMLPRS--VEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~---~---------------------~~~~~~~~~--v~~v~  211 (437)
                      +..++|+|.| .|++|.++++.|+..|. +++++|.+.-   +                     +.+..+...  ++.+.
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            5677999998 58999999999999996 8999987621   0                     011222223  34444


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceee
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQ  268 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~  268 (437)
                      .++ +.+.+.++++++|+||.+...    +        ..-..+.+.++++++.+..
T Consensus        98 ~~i-~~~~~~~~~~~~D~Vi~~~d~----~--------~~r~~l~~~~~~~~ip~i~  141 (202)
T TIGR02356        98 ERV-TAENLELLINNVDLVLDCTDN----F--------ATRYLINDACVALGTPLIS  141 (202)
T ss_pred             hcC-CHHHHHHHHhCCCEEEECCCC----H--------HHHHHHHHHHHHcCCCEEE
Confidence            445 345677889999999987632    1        1223466777777765433

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.92  E-value=0.053  Score=53.79  Aligned_cols=58  Identities=17%  Similarity=0.268  Sum_probs=48.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.++.+|+-|+..|+.+|++|+++....                      .++.+.+..+|+||.++|..
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------~~l~~~~~~ADIVV~avG~~  212 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------RDLAAHTRQADIVVAAVGKR  212 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------CCHHHHhhhCCEEEEcCCCc
Confidence            47899999999999999999999999999999865321                      13556778889999998843

>PLN02602 lactate dehydrogenase

Probab=95.87  E-value=0.059  Score=55.11  Aligned_cols=97  Identities=18%  Similarity=0.263  Sum_probs=67.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HHHhhC-----CCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EVVDML-----PRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++|.|+|+ |.||++++-.|+..|.  +++++|.+.+.   ...+..     .....+. ++ .|.    +.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~-~dy----~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-AS-TDY----AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eC-CCH----HHhCCCCEEE
Confidence            69999996 9999999999998884  79999987652   111111     1112222 11 122    3478899999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      -+||....+   -.+.+..|+.-...+.+.+.+++.+
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~  147 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPD  147 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999985432   3468888998888999998887765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.84  E-value=0.03  Score=56.64  Aligned_cols=72  Identities=19%  Similarity=0.238  Sum_probs=48.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH---HHHHHHHh--cccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP---CTLKAAVE--NCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~---~~v~~a~~--~~D~VIh~A  234 (437)
                      +.+|||+||+|++|..+++.+...|+.|++...+.+. +....+.....   .|..+.   +.++++..  ++|+|+...
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~v---i~y~~~~~~~~v~~~t~g~gvDvv~D~v  219 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHV---INYREEDFVEQVRELTGGKGVDVVLDTV  219 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEE---EcCCcccHHHHHHHHcCCCCceEEEECC
Confidence            7899999999999999999888899777666665542 33444443221   123332   33444443  479999987


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      |
T Consensus       220 G  220 (326)
T COG0604         220 G  220 (326)
T ss_pred             C
Confidence            6

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.84  E-value=0.038  Score=52.07  Aligned_cols=71  Identities=11%  Similarity=0.213  Sum_probs=49.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCC-CCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLP-RSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.+++|||.|| |-+|...++.|++.|++|+++++....+...... ..+.+..-++.     ...++++|+||-+-
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT   78 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAAT   78 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcC
Confidence            378999999998 9999999999999999999998765433222222 24555543332     23356778887653

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.83  E-value=0.038  Score=53.81  Aligned_cols=73  Identities=22%  Similarity=0.198  Sum_probs=50.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHH---HHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTL---KAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v---~~a~~--~~D~VIh~  233 (437)
                      .+++++|+|++|.+|.++++.+...|.+|++++++.+. +.+..+..  .. ..|..+.+..   .+...  ++|++|++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGA--DA-VFNYRAEDLADRILAATAGQGVDVIIEV  220 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--CE-EEeCCCcCHHHHHHHHcCCCceEEEEEC
Confidence            46799999999999999999999999999999887652 22222322  11 1344443333   33332  47999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       221 ~~  222 (325)
T cd08253         221 LA  222 (325)
T ss_pred             Cc
Confidence            86

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.82  E-value=0.039  Score=49.06  Aligned_cols=58  Identities=21%  Similarity=0.232  Sum_probs=49.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+.-+|..++..|.++|++|.++.++..                      +++++++.+|+||...|..
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------~l~~~v~~ADIVvsAtg~~   82 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------QLQSKVHDADVVVVGSPKP   82 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------CHHHHHhhCCEEEEecCCC
Confidence            478999999999999999999999999999999876432                      3456788889999988865

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.81  E-value=0.027  Score=55.96  Aligned_cols=75  Identities=17%  Similarity=0.284  Sum_probs=48.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCC--CeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPR--SVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~--~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ..+++++|.|| ||.|++++-.|++.|. +|+++.|+.+.  ...+.+..  ....+.  +.+...+......+|+|||+
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~~~~~divINa  201 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARGIEDVIAAADGVVNA  201 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHhHHHHHHhhcCEEEEc
Confidence            45789999988 9999999999999996 78899997652  12222211  110111  12222334445678999998


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      -.+
T Consensus       202 Tp~  204 (283)
T PRK14027        202 TPM  204 (283)
T ss_pred             CCC
Confidence            654

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.80  E-value=0.025  Score=56.24  Aligned_cols=77  Identities=12%  Similarity=0.255  Sum_probs=49.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc---H--HHHhhCCCC--eEEEEecCCCHHHHHHHHhcccEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD---Q--EVVDMLPRS--VEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~---~--~~~~~~~~~--v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      +.+++++|.|| ||.+++++..|+..|. +|+++.|+.+   .  ...+.+...  ......++.+.+.+.+.+..+|+|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            56789999997 7779999999999995 8999999853   1  112222211  111122332333345566778999


Q ss_pred             EEeccC
Q 013761          231 IYCATA  236 (437)
Q Consensus       231 Ih~Ag~  236 (437)
                      ||+--+
T Consensus       201 INaTp~  206 (288)
T PRK12749        201 TNGTKV  206 (288)
T ss_pred             EECCCC
Confidence            997643

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.80  E-value=0.038  Score=57.84  Aligned_cols=74  Identities=20%  Similarity=0.315  Sum_probs=54.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-H-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-E-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      .+.+++|+|.|+ |.+|..+++.|...| .+|++++|+.+. . ....++.  ..+     +.+++.+++.++|+||.+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~--~~i-----~~~~l~~~l~~aDvVi~aT  248 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG--EAV-----KFEDLEEYLAEADIVISST  248 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC--eEe-----eHHHHHHHHhhCCEEEECC
Confidence            367899999987 999999999999999 789999998653 1 2223322  122     2346778888999999997


Q ss_pred             cCCCC
Q 013761          235 TARST  239 (437)
Q Consensus       235 g~~~~  239 (437)
                      +...+
T Consensus       249 ~s~~~  253 (417)
T TIGR01035       249 GAPHP  253 (417)
T ss_pred             CCCCc
Confidence            65443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.80  E-value=0.036  Score=55.64  Aligned_cols=72  Identities=19%  Similarity=0.295  Sum_probs=53.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++|+|.|+ |.+|+.+++.|...| .+|++++|+.+.  +....++.  .     +.+.+++.+++..+|+||.+.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~--~-----~~~~~~~~~~l~~aDvVi~at~  247 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG--N-----AVPLDELLELLNEADVVISATG  247 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC--e-----EEeHHHHHHHHhcCCEEEECCC
Confidence            57889999987 999999999999876 678899998652  22333332  2     2233567778888999999987


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      ...
T Consensus       248 ~~~  250 (311)
T cd05213         248 APH  250 (311)
T ss_pred             CCc
Confidence            543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.76  E-value=0.055  Score=53.64  Aligned_cols=59  Identities=10%  Similarity=0.211  Sum_probs=48.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.||-+|+-++..|+++|++|+++....                      .++++.+..+|+||-++|..
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVI~avg~~  212 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT----------------------RNLAEVARKADILVVAIGRG  212 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC----------------------CCHHHHHhhCCEEEEecCcc
Confidence            47899999999999999999999999999999872111                      03566778889999998865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       213 ~  213 (284)
T PRK14179        213 H  213 (284)
T ss_pred             c
Confidence            4

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.75  E-value=0.038  Score=50.21  Aligned_cols=58  Identities=17%  Similarity=0.299  Sum_probs=45.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +.||+|+|.|.+.-+|+-|+..|.++|+.|.++.....                      .+++..+.+|+||-.+|...
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~----------------------~l~~~~~~ADIVVsa~G~~~   91 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK----------------------NLQEITRRADIVVSAVGKPN   91 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS----------------------SHHHHHTTSSEEEE-SSSTT
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC----------------------cccceeeeccEEeeeecccc
Confidence            78999999999999999999999999999998765432                      24567788899999998754

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.058  Score=53.42  Aligned_cols=59  Identities=12%  Similarity=0.242  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+.-+|+-|+..|+++|++|+++.....                      ++++....+|+||-++|..
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~----------------------~l~~~~~~ADIvI~AvG~~  211 (284)
T PRK14170        154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTK----------------------DLPQVAKEADILVVATGLA  211 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEecCCc
Confidence            478999999999999999999999999999998754321                      2456777889999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       212 ~  212 (284)
T PRK14170        212 K  212 (284)
T ss_pred             C
Confidence            4

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.73  E-value=0.019  Score=54.56  Aligned_cols=35  Identities=20%  Similarity=0.269  Sum_probs=32.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      |+|.|.||+|.+|.+++..|++.|++|.+.+|+.+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHH
Confidence            47999999999999999999999999999999765

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.72  E-value=0.049  Score=53.17  Aligned_cols=65  Identities=23%  Similarity=0.210  Sum_probs=44.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHH-CCCeEEEE-ecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLML-RGYSVKAL-VRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~-~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++|.|+|++|.+|+.+++.+.+ .+.+|+++ +++.+...  ..      -..++...++++++++.+|+||.++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~--~~------~~~~i~~~~dl~~ll~~~DvVid~t   68 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLV--GQ------GALGVAITDDLEAVLADADVLIDFT   68 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccc--cc------CCCCccccCCHHHhccCCCEEEECC
Confidence            5899999999999999998886 46887764 44433210  11      1223434455666777889999876

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.72  E-value=0.082  Score=55.54  Aligned_cols=74  Identities=22%  Similarity=0.201  Sum_probs=52.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC---CCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML---PRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+|+|+|+|+ |++|.++++.|+++|++|.+.+..........+   ..++.+..++..+     ..+.++|+||...|
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spg   76 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPG   76 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCC
Confidence            46789999997 589999999999999999999876543211122   2355655544321     24467899999999


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      +..
T Consensus        77 i~~   79 (445)
T PRK04308         77 ISE   79 (445)
T ss_pred             CCC
Confidence            864

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.71  E-value=0.072  Score=53.16  Aligned_cols=103  Identities=12%  Similarity=0.172  Sum_probs=65.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH-H-HhhCCCC--eEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE-V-VDMLPRS--VEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~-~-~~~~~~~--v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +++|.|.|| |.+|..++..|+..|. +|+++|++++.. . ...+...  .......++...+. +.++++|+||.++|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            368999999 9999999999998875 999999976521 1 1111000  00000111111112 35788999999998


Q ss_pred             CCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          236 ARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       236 ~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .....   -.+.+.-|+.-...+++.+.+...+
T Consensus        80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~  112 (307)
T PRK06223         80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPD  112 (307)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            75422   2346677887778888877776544

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.70  E-value=0.073  Score=52.98  Aligned_cols=59  Identities=10%  Similarity=0.199  Sum_probs=49.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+.-+|+-|+..|+++|++|+++.....                      ++++.+..+|+||-++|..
T Consensus       157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~----------------------~l~~~~~~ADIvVsAvGkp  214 (294)
T PRK14187        157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATR----------------------DLADYCSKADILVAAVGIP  214 (294)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEccCCc
Confidence            488999999999999999999999999999998765321                      2456778889999999875


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       215 ~  215 (294)
T PRK14187        215 N  215 (294)
T ss_pred             C
Confidence            4

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.69  E-value=0.047  Score=56.29  Aligned_cols=54  Identities=22%  Similarity=0.415  Sum_probs=43.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ..++|.|.||.|.+|..+++.|.+.|++|++.+|+..                     +..++++.++|+||-+.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~---------------------~~~~~~~~~aDlVilav  150 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW---------------------DRAEDILADAGMVIVSV  150 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc---------------------hhHHHHHhcCCEEEEeC
Confidence            3478999999999999999999999999999998521                     12345667788888876

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=95.68  E-value=0.041  Score=53.47  Aligned_cols=73  Identities=22%  Similarity=0.197  Sum_probs=49.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHH---HHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCT---LKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~---v~~a~~--~~D~VIh~  233 (437)
                      .+.+++|+|++|.||..+++.+...|++|++++++.+. +....+...   ...|..+.+.   +.+...  ++|++|++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGAD---VAINYRTEDFAEEVKEATGGRGVDVILDM  215 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC---EEEeCCchhHHHHHHHHhCCCCeEEEEEC
Confidence            46799999999999999999999999999999887542 222333221   1233333332   333332  47999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       216 ~g  217 (323)
T cd05276         216 VG  217 (323)
T ss_pred             Cc
Confidence            87

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.67  E-value=0.08  Score=52.47  Aligned_cols=59  Identities=17%  Similarity=0.197  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-|+..|+++|++|+++.....                      ++++....+|+||-++|..
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~----------------------~l~~~~~~ADIvIsAvGk~  213 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQ----------------------NLPSIVRQADIIVGAVGKP  213 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEeCCCc
Confidence            478999999999999999999999999999998864322                      2456677889999888865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       214 ~  214 (284)
T PRK14177        214 E  214 (284)
T ss_pred             C
Confidence            4

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.65  E-value=0.047  Score=54.03  Aligned_cols=73  Identities=19%  Similarity=0.201  Sum_probs=48.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHH-hcccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAV-ENCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~-~~~D~VIh~A  234 (437)
                      .+.++||+||+|++|..+++.+...|++|++++++.+. +.++.++.. .+  .|..+.+   .+.++. .++|++|.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~-~v--i~~~~~~~~~~v~~~~~~gvd~vld~~  219 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFD-AV--FNYKTVSLEEALKEAAPDGIDCYFDNV  219 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC-EE--EeCCCccHHHHHHHHCCCCcEEEEECC
Confidence            46799999999999999999888899999998877653 233334322 22  2333322   232222 2479999987


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      |
T Consensus       220 g  220 (329)
T cd08294         220 G  220 (329)
T ss_pred             C
Confidence            6

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.65  E-value=0.083  Score=52.44  Aligned_cols=59  Identities=17%  Similarity=0.237  Sum_probs=49.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.|.-+|+-|+..|+.+|++|+++.....                      ++++....+|+||-++|..
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~----------------------~l~~~~~~ADIvIsAvGkp  209 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ----------------------DLPAVTRRADVLVVAVGRP  209 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEecCCc
Confidence            478999999999999999999999999999998754321                      1456677789999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       210 ~  210 (287)
T PRK14173        210 H  210 (287)
T ss_pred             C
Confidence            4

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.64  E-value=0.061  Score=54.15  Aligned_cols=97  Identities=19%  Similarity=0.246  Sum_probs=67.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHHhh--CC---CCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVVDM--LP---RSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~~~--~~---~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++|.|+|+ |.||..++..|+..|  .+++++|.+.+.   ...+.  ..   ....+...  .|.    +.++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy----~~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY----SVTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH----HHhCCCCEEE
Confidence            48999996 999999999999887  479999987652   11111  11   11122211  232    2378899999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .+||....+   -.+.+..|..-...+.+.+.+++.+
T Consensus        77 itaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~  113 (312)
T cd05293          77 VTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPN  113 (312)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999975432   3457899998888999999888765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.62  E-value=0.045  Score=54.77  Aligned_cols=71  Identities=15%  Similarity=0.176  Sum_probs=47.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHh-hCCCCeEEEEecCCCH---HHHHHHH-hcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVD-MLPRSVEIVLGDVGDP---CTLKAAV-ENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~-~~~~~v~~v~~Dltd~---~~v~~a~-~~~D~VIh~A  234 (437)
                      .+|||+||+|++|..+++.+...|+ +|++++++.+. +.+. .++... ++  |..+.   +.+.++. .++|++|.++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~-vi--~~~~~~~~~~i~~~~~~gvd~vid~~  232 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA-AI--NYKTDNVAERLRELCPEGVDVYFDNV  232 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE-EE--ECCCCCHHHHHHHHCCCCceEEEECC
Confidence            7999999999999999988888998 79998887653 2222 243322 22  22221   2233332 2589999987


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      |
T Consensus       233 g  233 (345)
T cd08293         233 G  233 (345)
T ss_pred             C
Confidence            6

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.62  E-value=0.012  Score=51.01  Aligned_cols=89  Identities=20%  Similarity=0.270  Sum_probs=54.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHH-CCCeEEE-EecCCcHHH----HhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLML-RGYSVKA-LVRKADQEV----VDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~-~~R~~~~~~----~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++|+|.|++|.+|+.+++.+.+ .|+++.. ++|+.+...    -...+..    ...+.-.++++++++.+|+||..- 
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~----~~~~~v~~~l~~~~~~~DVvIDfT-   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG----PLGVPVTDDLEELLEEADVVIDFT-   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS----T-SSBEBS-HHHHTTH-SEEEEES-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC----CcccccchhHHHhcccCCEEEEcC-
Confidence            4799999999999999999999 7888654 556552110    0001000    111222256778888899999864 


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhcCCcee
Q 013761          236 ARSTITGDLFRVDYQGVYNVTKAFQDFNNKLA  267 (437)
Q Consensus       236 ~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~  267 (437)
                                  +..++...++.+.++++.+.
T Consensus        76 ------------~p~~~~~~~~~~~~~g~~~V   95 (124)
T PF01113_consen   76 ------------NPDAVYDNLEYALKHGVPLV   95 (124)
T ss_dssp             -------------HHHHHHHHHHHHHHT-EEE
T ss_pred             ------------ChHHhHHHHHHHHhCCCCEE
Confidence                        12344567777777776543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.61  E-value=0.059  Score=54.01  Aligned_cols=73  Identities=16%  Similarity=0.226  Sum_probs=48.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhh-CCCCeEEEEecCCCH----HHHHHHH-hcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDM-LPRSVEIVLGDVGDP----CTLKAAV-ENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~-~~~~v~~v~~Dltd~----~~v~~a~-~~~D~VIh  232 (437)
                      .+.+|||+||+|++|..+++.+...|++|++++++.+. +.++. ++.. .++  |..+.    +.+.+.. .++|++|.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~-~vi--~~~~~~~~~~~i~~~~~~gvd~v~d  227 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFD-DAF--NYKEEPDLDAALKRYFPNGIDIYFD  227 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCc-eeE--EcCCcccHHHHHHHhCCCCcEEEEE
Confidence            46799999999999999999888899999998887653 22333 4322 122  22221    1222222 25799999


Q ss_pred             ecc
Q 013761          233 CAT  235 (437)
Q Consensus       233 ~Ag  235 (437)
                      +.|
T Consensus       228 ~~g  230 (338)
T cd08295         228 NVG  230 (338)
T ss_pred             CCC
Confidence            876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.59  E-value=0.066  Score=54.32  Aligned_cols=72  Identities=26%  Similarity=0.308  Sum_probs=53.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+++|+|+|+. |+|...++.+...|++|++++|+.+. +..++++....+   |-+|++.++++-+.+|++|.+++
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i---~~~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVI---NSSDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEE---EcCCchhhHHhHhhCcEEEECCC
Confidence            37899999997 99999988888899999999999874 334555443322   33366666665555899999987

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.57  E-value=0.29  Score=49.50  Aligned_cols=100  Identities=11%  Similarity=0.223  Sum_probs=68.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH---HHhhC------CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE---VVDML------PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~---~~~~~------~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      ...++|.|.| +|.+|..++..|+..|. +|+++|++++..   .++..      .....+..  .+|.    +.++++|
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~----~~l~~aD   76 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY----EDIAGSD   76 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH----HHhCCCC
Confidence            3457899999 59999999999999995 899999987621   11111      11222221  1232    3678999


Q ss_pred             EEEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.+||.....        ..+.+..|+.-...+++.+.+...+
T Consensus        77 iVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~  121 (321)
T PTZ00082         77 VVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPN  121 (321)
T ss_pred             EEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999875422        2346777888778888888777765

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.57  E-value=0.11  Score=51.61  Aligned_cols=59  Identities=19%  Similarity=0.215  Sum_probs=49.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.|.-+|+-|+..|+.+|+.|+++....                      .++.+.+..+|+||-++|..
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t----------------------~~l~~~~~~ADIvI~AvG~p  212 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT----------------------KNLAELTKQADILIVAVGKP  212 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc----------------------hhHHHHHHhCCEEEEecCCC
Confidence            47899999999999999999999999999999875321                      23667788889999998765


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       213 ~  213 (284)
T PRK14190        213 K  213 (284)
T ss_pred             C
Confidence            4

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.56  E-value=0.034  Score=56.75  Aligned_cols=95  Identities=13%  Similarity=0.124  Sum_probs=53.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCeEEEE-ecCCc-HHHHhhCCCCeEEE-EecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR-GYSVKAL-VRKAD-QEVVDMLPRSVEIV-LGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~-~R~~~-~~~~~~~~~~v~~v-~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++|.|.||||.+|..+++.|.+. +++++.+ +++.+ .+.....-..+... ..++.+. +.+++++++|+||.|.+..
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~   79 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG   79 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence            47999999999999999999986 6788743 54332 11111111111111 1112211 2234445799999987532


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCceeeee
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNKLAQLR  270 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~  270 (437)
                                   ....++..+.+.|+++.-++
T Consensus        80 -------------~s~~~~~~~~~~G~~VIDlS   99 (346)
T TIGR01850        80 -------------VSAELAPELLAAGVKVIDLS   99 (346)
T ss_pred             -------------HHHHHHHHHHhCCCEEEeCC
Confidence                         22445566666776654443

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.56  E-value=0.053  Score=53.41  Aligned_cols=74  Identities=26%  Similarity=0.232  Sum_probs=51.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~  233 (437)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.+. ..+......   ...|..+.+..+.+.+     ++|++|++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  242 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGAD---YVIDYRKEDFVREVRELTGKRGVDVVVEH  242 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC---eEEecCChHHHHHHHHHhCCCCCcEEEEC
Confidence            46799999999999999999999999999999887652 122222211   1235555544443332     46999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       243 ~g~  245 (342)
T cd08266         243 VGA  245 (342)
T ss_pred             CcH
Confidence            873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.56  E-value=0.045  Score=57.33  Aligned_cols=67  Identities=15%  Similarity=0.125  Sum_probs=49.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++|+|.|. |.||+.+++.|...|++|+++++++........ ....     +.+   ++++++++|+||.+.|
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~-----v~~---l~eal~~aDVVI~aTG  276 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFR-----VMT---MEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCE-----ecC---HHHHHhCCCEEEECCC
Confidence            57899999996 899999999999999999999987653211111 1222     112   3566778999998765

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.52  E-value=0.014  Score=62.16  Aligned_cols=71  Identities=17%  Similarity=0.222  Sum_probs=48.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++.+++++|+|+ |++|++++..|++.|++|++.+|+.+.  ...+....  .  ..++.+   +. .+..+|+||++..
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~--~--~~~~~~---~~-~l~~~DiVInatP  399 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQG--K--AFPLES---LP-ELHRIDIIINCLP  399 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc--c--eechhH---hc-ccCCCCEEEEcCC
Confidence            357889999996 899999999999999999999887542  11122211  1  122222   21 1457899999975


Q ss_pred             CC
Q 013761          236 AR  237 (437)
Q Consensus       236 ~~  237 (437)
                      ..
T Consensus       400 ~g  401 (477)
T PRK09310        400 PS  401 (477)
T ss_pred             CC
Confidence            43

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.52  E-value=0.065  Score=50.63  Aligned_cols=89  Identities=15%  Similarity=0.176  Sum_probs=61.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++.+++|||.|| |.+|..-++.|++.|++|++++....++..... ..++.++..+....     .++++|.||-+-+.
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~-----dl~~~~lVi~at~d   79 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDAD-----ILEGAFLVIAATDD   79 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH-----HhCCcEEEEECCCC
Confidence            378899999987 889999999999999999999876554322211 23788888887632     35677888754321


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcCC
Q 013761          237 RSTITGDLFRVDYQGVYNVTKAFQDFNN  264 (437)
Q Consensus       237 ~~~~~~~~~~vNv~gt~~l~~aa~~~gv  264 (437)
                              -++|    ..+.+.|++.++
T Consensus        80 --------~~ln----~~i~~~a~~~~i   95 (205)
T TIGR01470        80 --------EELN----RRVAHAARARGV   95 (205)
T ss_pred             --------HHHH----HHHHHHHHHcCC
Confidence                    1123    246677766664

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.50  E-value=0.096  Score=51.76  Aligned_cols=59  Identities=17%  Similarity=0.287  Sum_probs=49.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-|+..|+++|++|+++.....                      .+.+....+|+||-++|..
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~----------------------~l~~~~~~ADIvIsAvGkp  212 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK----------------------NLKEVCKKADILVVAIGRP  212 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEcCCCc
Confidence            478999999999999999999999999999998864321                      2456777789999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       213 ~  213 (278)
T PRK14172        213 K  213 (278)
T ss_pred             C
Confidence            4

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.45  E-value=0.04  Score=52.03  Aligned_cols=64  Identities=13%  Similarity=0.146  Sum_probs=44.4

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++...||+|-||..|+++|++.|++|++..|+.++.   ..+.+...+        ...+.+++++.+|+||-..
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i--------~~~~~~dA~~~aDVVvLAV   68 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLI--------TGGSNEDAAALADVVVLAV   68 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcccc--------ccCChHHHHhcCCEEEEec
Confidence            344556789999999999999999999997776531   222232221        2234567888899998754

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.44  E-value=0.11  Score=51.33  Aligned_cols=59  Identities=15%  Similarity=0.251  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.|..+|+-|+..|+.+|++|+++.....                      ++++....+|+||-++|..
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~----------------------~l~~~~~~ADIvI~AvG~p  210 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTR----------------------NLKQLTKEADILVVAVGVP  210 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCC----------------------CHHHHHhhCCEEEEccCCc
Confidence            478999999999999999999999999999998754321                      2556777889999999875


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       211 ~  211 (282)
T PRK14169        211 H  211 (282)
T ss_pred             C
Confidence            4

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=95.43  E-value=0.025  Score=57.57  Aligned_cols=67  Identities=19%  Similarity=0.360  Sum_probs=44.7

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEE---EEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVK---ALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~---~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +|+|.||||.+|++|++.|.++|+.++   .+.+..+. .... +. .......|+.     ...++++|+||-++|.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-~~-~~~~~~~~~~-----~~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-FK-GKELEVNEAK-----IESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-eC-CeeEEEEeCC-----hHHhcCCCEEEECCCH
Confidence            479999999999999999999887643   34454331 1111 11 2445556663     1234789999999874

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.41  E-value=0.1  Score=51.58  Aligned_cols=59  Identities=20%  Similarity=0.226  Sum_probs=48.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-++..|+++|++|+++.....                      ++.+.++.+|+||-++|..
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~----------------------~l~~~~~~ADIvV~AvGkp  211 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTK----------------------DLKAHTKKADIVIVGVGKP  211 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCc----------------------CHHHHHhhCCEEEEecCcc
Confidence            488999999999999999999999999999986643211                      1356778889999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       212 ~  212 (281)
T PRK14183        212 N  212 (281)
T ss_pred             c
Confidence            4

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.39  E-value=0.039  Score=58.10  Aligned_cols=65  Identities=23%  Similarity=0.350  Sum_probs=46.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      |+|.|.||+|.+|..+++.|.+.|++|++.+|+.+.  ......  ++.+       ..+..++++.+|+||-+.-
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~--gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL--GVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc--CCee-------ccCHHHHhccCCEEEEecC
Confidence            479999999999999999999999999999998653  112222  1211       1123456677898888763

>PRK04148 hypothetical protein; Provisional

Probab=95.38  E-value=0.042  Score=48.42  Aligned_cols=89  Identities=17%  Similarity=0.164  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      .++++++.|..  .|.+++..|.+.|++|+++|.++... ..+  ...+.++.+|+.+++-  ++.+++|.|+..=    
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~--~~~~~~v~dDlf~p~~--~~y~~a~liysir----   85 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAK--KLGLNAFVDDLFNPNL--EIYKNAKLIYSIR----   85 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHH--HhCCeEEECcCCCCCH--HHHhcCCEEEEeC----
Confidence            45789999875  78889999999999999999987631 111  2257899999998864  6677889887642    


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                      + +.++       ...+++.+++.++.+
T Consensus        86 p-p~el-------~~~~~~la~~~~~~~  105 (134)
T PRK04148         86 P-PRDL-------QPFILELAKKINVPL  105 (134)
T ss_pred             C-CHHH-------HHHHHHHHHHcCCCE
Confidence            2 2222       235777787777664

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.38  E-value=0.07  Score=48.26  Aligned_cols=68  Identities=16%  Similarity=0.206  Sum_probs=45.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.+++|+|.|| |-+|...++.|++.|++|++++....++. ..+. .+.+..-.+.. +    -++++|+||-+
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~~~l-~~l~-~i~~~~~~~~~-~----dl~~a~lViaa   77 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEICKEM-KELP-YITWKQKTFSN-D----DIKDAHLIYAA   77 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccCHHH-Hhcc-CcEEEecccCh-h----cCCCceEEEEC
Confidence            478999999987 88999999999999999999864433322 2232 34443333322 2    24556777754

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.37  E-value=0.026  Score=57.45  Aligned_cols=89  Identities=17%  Similarity=0.210  Sum_probs=51.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeE---EEEecCCc-HHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSV---KALVRKAD-QEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V---~~~~R~~~-~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +++|.|+||||.+|+.|++.|.++++.+   ..+..... .+... +. .   ...++.+.+.. + ++++|+||.+++.
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~-~~-~---~~l~~~~~~~~-~-~~~vD~vFla~p~   76 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP-FA-G---KNLRVREVDSF-D-FSQVQLAFFAAGA   76 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec-cC-C---cceEEeeCChH-H-hcCCCEEEEcCCH
Confidence            3689999999999999999999877643   33332221 11111 11 1   22344333322 2 4789999998752


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcCCceeee
Q 013761          237 RSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQL  269 (437)
Q Consensus       237 ~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l  269 (437)
                      .   .          ...++..+.+.|+++.-+
T Consensus        77 ~---~----------s~~~v~~~~~~G~~VIDl   96 (336)
T PRK05671         77 A---V----------SRSFAEKARAAGCSVIDL   96 (336)
T ss_pred             H---H----------HHHHHHHHHHCCCeEEEC
Confidence            1   0          123666667778764433

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.33  E-value=0.094  Score=44.98  Aligned_cols=89  Identities=17%  Similarity=0.287  Sum_probs=50.3

Q ss_pred             EEEEECCCChHHHHHHHHHHHCC-CeE-EEEecCC-cHHHHhhC-C---CCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRG-YSV-KALVRKA-DQEVVDML-P---RSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G-~~V-~~~~R~~-~~~~~~~~-~---~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +|.|.||||.+|+.|++.|++.- +++ .+++++. ........ +   ........| .+.+    .+..+|+||.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence            68999999999999999999853 554 4455554 21111111 1   111222222 3333    3478899999864


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhcCCceeee
Q 013761          236 ARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQL  269 (437)
Q Consensus       236 ~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l  269 (437)
                      .             .....+...+.+.|+++.-+
T Consensus        76 ~-------------~~~~~~~~~~~~~g~~ViD~   96 (121)
T PF01118_consen   76 H-------------GASKELAPKLLKAGIKVIDL   96 (121)
T ss_dssp             H-------------HHHHHHHHHHHHTTSEEEES
T ss_pred             h-------------hHHHHHHHHHhhCCcEEEeC
Confidence            2             11234555666777654433

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.32  E-value=0.3  Score=49.01  Aligned_cols=96  Identities=21%  Similarity=0.299  Sum_probs=67.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHHhhCC-----CCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVVDMLP-----RSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~~~~~-----~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      |+|.|.|+ |.+|..++..|+..|  .+|+++|++.+.   +..+...     ....+..   .|.    +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCCCEEE
Confidence            37999998 999999999999999  689999998652   1111111     1122221   232    3578899999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .+++.....   ..+.+..|+.-...+++.+.+++.+
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~  109 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPD  109 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999975432   3457888888888888888877655

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=95.29  E-value=0.078  Score=54.52  Aligned_cols=67  Identities=24%  Similarity=0.447  Sum_probs=53.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      +++|+|.|+ |.+|+.++..+.+.|++|++++.++...... ..  -..+.+|..|.+.+.++++.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~-~a--d~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQ-VA--DEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhH-hC--ceEEecCCCCHHHHHHHHhcCCEEE
Confidence            468999998 7999999999999999999999875532211 11  1355679999999999999999874

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.26  E-value=0.091  Score=47.78  Aligned_cols=70  Identities=17%  Similarity=0.270  Sum_probs=46.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +.+|+++|.| -|.+|+.+|++|...|++|++.+.++-.. ++...+..++.        .+++++...|++|.+-|...
T Consensus        21 l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~a-lqA~~dGf~v~--------~~~~a~~~adi~vtaTG~~~   90 (162)
T PF00670_consen   21 LAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRA-LQAAMDGFEVM--------TLEEALRDADIFVTATGNKD   90 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH-HHHHHTT-EEE---------HHHHTTT-SEEEE-SSSSS
T ss_pred             eCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHH-HHhhhcCcEec--------CHHHHHhhCCEEEECCCCcc
Confidence            6899999996 49999999999999999999999986532 22222333333        25678888899998877543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN00203 glutamyl-tRNA reductase

Probab=95.25  E-value=0.032  Score=59.92  Aligned_cols=76  Identities=18%  Similarity=0.407  Sum_probs=54.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++|+|.|+ |.+|+.+++.|+..|+ +|+++.|+.+.  .....++ .+.+   .+...+++.+++.++|+||.+-+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~-g~~i---~~~~~~dl~~al~~aDVVIsAT~  338 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP-DVEI---IYKPLDEMLACAAEADVVFTSTS  338 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC-CCce---EeecHhhHHHHHhcCCEEEEccC
Confidence            77899999999 9999999999999996 79999998653  2222222 2211   12233456778889999999876


Q ss_pred             CCCC
Q 013761          236 ARST  239 (437)
Q Consensus       236 ~~~~  239 (437)
                      ...+
T Consensus       339 s~~p  342 (519)
T PLN00203        339 SETP  342 (519)
T ss_pred             CCCC
Confidence            5443

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.22  E-value=0.35  Score=48.63  Aligned_cols=95  Identities=16%  Similarity=0.238  Sum_probs=69.0

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HHHhhC------C-CCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EVVDML------P-RSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~~~~~------~-~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      +|.|.|+ |.||..++..|+..|.  +++++|.+.+.   +..+..      . ..+.+..+   |    .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~----y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D----YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C----HHHhCCCCEE
Confidence            4788898 9999999999998884  79999987652   111111      1 13333332   2    3577889999


Q ss_pred             EEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |-+||....+     -.+.+..|..-...+++.+.+++.+
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~  112 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKE  112 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999985322     2568999999999999999888865

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.20  E-value=0.061  Score=54.63  Aligned_cols=68  Identities=19%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+|+|.|.|- |.||+.+++.|...|++|++.+|..........  .+.        ..+++++++.+|+|+.+.-.
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~--~~~--------~~~l~ell~~aDiV~l~lP~  214 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKEL--GAE--------YRPLEELLRESDFVSLHVPL  214 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHHc--CCE--------ecCHHHHHhhCCEEEEeCCC
Confidence            478999999987 999999999999999999999987543211111  111        12466788899999988743

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=95.20  E-value=0.13  Score=51.27  Aligned_cols=58  Identities=17%  Similarity=0.210  Sum_probs=48.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+.-+|+-|+..|+.+|++|+++.....                      .+++.+..+|+||-++|..
T Consensus       164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~----------------------nl~~~~~~ADIvv~AvGk~  221 (299)
T PLN02516        164 PIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTP----------------------DPESIVREADIVIAAAGQA  221 (299)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEcCCCc
Confidence            478999999999999999999999999999998854321                      2456778889999998864

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.19  E-value=0.28  Score=50.54  Aligned_cols=96  Identities=18%  Similarity=0.212  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC-------------------cH-----HHHhhCCCC--eEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA-------------------DQ-----EVVDMLPRS--VEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~-------------------~~-----~~~~~~~~~--v~~v~  211 (437)
                      +..++|+|.|+ |++|+++++.|+..|. +++++|++.                   ..     +.+.++...  +..+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            56778999966 8999999999999996 788988862                   00     011122233  34444


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceee
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQ  268 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~  268 (437)
                      ..+. .+.+.++++++|+||++..-    +.        .-..+.++|.+.++.+..
T Consensus       212 ~~~~-~~~~~~~~~~~D~Vv~~~d~----~~--------~r~~ln~~~~~~~ip~i~  255 (376)
T PRK08762        212 ERVT-SDNVEALLQDVDVVVDGADN----FP--------TRYLLNDACVKLGKPLVY  255 (376)
T ss_pred             ccCC-hHHHHHHHhCCCEEEECCCC----HH--------HHHHHHHHHHHcCCCEEE
Confidence            4443 45677888999999998632    11        123466778888866544

>PLN02928 oxidoreductase family protein

Probab=95.18  E-value=0.068  Score=54.58  Aligned_cols=79  Identities=20%  Similarity=0.250  Sum_probs=54.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC---CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML---PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      .+.+|++.|.|- |.||+++++.|...|.+|++.+|+.........   ...+.-+........++++++..+|+|+.++
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            488999999977 999999999999999999999986432111100   0011111111124457889999999999987


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      -.+
T Consensus       235 Plt  237 (347)
T PLN02928        235 TLT  237 (347)
T ss_pred             CCC
Confidence            543

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.17  E-value=0.14  Score=50.67  Aligned_cols=58  Identities=21%  Similarity=0.257  Sum_probs=49.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.|++|+|.|.+.-+|+.|+..|..+|++|+++.++.                      ..+.+.+..+|+||.++|..
T Consensus       149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t----------------------~~L~~~~~~ADIvI~Avgk~  206 (279)
T PRK14178        149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT----------------------ENLKAELRQADILVSAAGKA  206 (279)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh----------------------hHHHHHHhhCCEEEECCCcc
Confidence            47899999999999999999999999999999887542                      34677888899999998754

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.15  E-value=0.082  Score=51.58  Aligned_cols=73  Identities=21%  Similarity=0.210  Sum_probs=48.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHH---HHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCT---LKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~---v~~a~~--~~D~VIh~  233 (437)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.+. +.....+.  ..+ .+..+.+.   +.+...  ++|++|++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~--~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~~  215 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGA--DIA-INYREEDFVEVVKAETGGKGVDVILDI  215 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--cEE-EecCchhHHHHHHHHcCCCCeEEEEEC
Confidence            46799999999999999999999999999998887653 22222221  111 22223222   333332  47999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       216 ~~  217 (325)
T TIGR02824       216 VG  217 (325)
T ss_pred             Cc
Confidence            87

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.09  E-value=0.1  Score=48.87  Aligned_cols=80  Identities=14%  Similarity=0.098  Sum_probs=55.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCC-HHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGD-PCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd-~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++.||+|+|.|.+.-+|+-|+..|+++|++|++++.+...... . ..+..-......| +..+.+.+..+|+||-.+|.
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~-~-~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~  136 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFT-R-GESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPS  136 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccc-c-ccccccccccccchhhHHHHHhhhCCEEEEccCC
Confidence            4899999999999999999999999999999999765321000 0 0000000111122 23477888899999999987


Q ss_pred             CCC
Q 013761          237 RST  239 (437)
Q Consensus       237 ~~~  239 (437)
                      ...
T Consensus       137 ~~~  139 (197)
T cd01079         137 PNY  139 (197)
T ss_pred             CCC
Confidence            654

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.06  E-value=0.099  Score=51.06  Aligned_cols=75  Identities=17%  Similarity=0.231  Sum_probs=49.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH-HHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP-CTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~-~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+.+++|+|++|++|..+++.+...|++|++++++.+. ..+...+. -.++..+..+. +.+.+...  ++|++|++++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~  222 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGA-AHVIVTDEEDLVAEVLRITGGKGVDVVFDPVG  222 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCC-CEEEecCCccHHHHHHHHhCCCCceEEEECCc
Confidence            35689999999999999999999999999999887642 22222221 12222222121 22333333  4799999886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.03  E-value=0.12  Score=48.62  Aligned_cols=73  Identities=12%  Similarity=0.151  Sum_probs=52.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecC---CcH--------------------HHHhhCCC--CeEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRK---ADQ--------------------EVVDMLPR--SVEIVLG  212 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~---~~~--------------------~~~~~~~~--~v~~v~~  212 (437)
                      |..++|+|.|+ |++|+.++..|+..|. +|+++|++   .+.                    +.+..+..  .+..+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            56789999988 8899999999999998 69999987   210                    00111112  3455556


Q ss_pred             cCCCHHHHHHHHhcccEEEEe
Q 013761          213 DVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       213 Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      +++ .+.+.++++++|+||-+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            664 46678888899999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.02  E-value=0.2  Score=49.70  Aligned_cols=59  Identities=19%  Similarity=0.170  Sum_probs=48.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHH--CCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLML--RGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~--~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++.||+++|.|.|..+|+-|+..|+.  +|+.|+++....                      ..+++.++.+|+||-++|
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T----------------------~~l~~~~k~ADIvV~AvG  212 (284)
T PRK14193        155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT----------------------RDLAAHTRRADIIVAAAG  212 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC----------------------CCHHHHHHhCCEEEEecC
Confidence            47899999999999999999999998  789998875432                      125667778899999998


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      ...
T Consensus       213 kp~  215 (284)
T PRK14193        213 VAH  215 (284)
T ss_pred             CcC
Confidence            754

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.00  E-value=0.06  Score=48.68  Aligned_cols=64  Identities=22%  Similarity=0.401  Sum_probs=42.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |++|.+.|- |-+|+.++++|++.|++|++.+|+.+. +.+...  .+..  +     ++..++++.+|+||-+.
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~--g~~~--~-----~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA--GAEV--A-----DSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT--TEEE--E-----SSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh--hhhh--h-----hhhhhHhhcccceEeec
Confidence            468888876 999999999999999999999998653 122222  2221  1     24556677778877764

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=94.97  E-value=0.16  Score=50.85  Aligned_cols=102  Identities=17%  Similarity=0.144  Sum_probs=66.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH---HHhhCCC-CeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE---VVDMLPR-SVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~---~~~~~~~-~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++|.|.|+ |.+|..++..|+..|. +|+++|+..+..   ....... ........|.-..+.++ ++++|+||-+||.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            47899997 9999999999999886 899999965521   1111110 00000111111112233 6789999999996


Q ss_pred             CCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          237 RSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       237 ~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ....   ..+.+..|..-...+++.+.+++.+
T Consensus        80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~  111 (305)
T TIGR01763        80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPN  111 (305)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            5432   2357888999999999988877654

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK06849 hypothetical protein; Provisional

Probab=94.97  E-value=0.11  Score=53.46  Aligned_cols=37  Identities=22%  Similarity=0.135  Sum_probs=34.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      .+|+|||||+...+|..+++.|.+.|++|++++....
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            4689999999999999999999999999999998754

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.96  E-value=0.11  Score=55.16  Aligned_cols=68  Identities=19%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+.+|+|+|.|. |.||+.++++|...|++|++.++++...... ....+.++        .++++++.+|+||.+.|
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~~G~~~~--------~leell~~ADIVI~atG  318 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQA-AMEGYQVV--------TLEDVVETADIFVTATG  318 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-HhcCceec--------cHHHHHhcCCEEEECCC
Confidence            478999999986 6799999999999999999998875532111 11122221        25567888999998865

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.93  E-value=0.28  Score=46.91  Aligned_cols=96  Identities=18%  Similarity=0.252  Sum_probs=63.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH------------------------HHHhhCCC--CeEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ------------------------EVVDMLPR--SVEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~------------------------~~~~~~~~--~v~~v~  211 (437)
                      +..++|+|.|+ |++|.++++.|+..|. +++++|.+.-+                        +.++.+.+  .+..+.
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            56779999985 8999999999999996 67777654210                        01112222  455565


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceee
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQ  268 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~  268 (437)
                      .++ +.+.+.++++++|+||.+...    +        ..-..+.++|.++++.+..
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~----~--------~~r~~l~~~~~~~~ip~i~  141 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDN----F--------ATRYLINDACVKLGKPLVS  141 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCC----H--------HHHHHHHHHHHHcCCCEEE
Confidence            566 356778888999999998642    1        1123466778777765433

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05295 MDH_like Malate dehydrogenase-like

Probab=94.93  E-value=0.043  Score=57.78  Aligned_cols=96  Identities=16%  Similarity=0.127  Sum_probs=65.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC---C----CeEEEEecCCcHH-----HHh--h----CCCCeEEEEecCCCHHHHHHH
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR---G----YSVKALVRKADQE-----VVD--M----LPRSVEIVLGDVGDPCTLKAA  223 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~---G----~~V~~~~R~~~~~-----~~~--~----~~~~v~~v~~Dltd~~~v~~a  223 (437)
                      -+|+||||+|.||.+|+-+++.-   |    ..++++|.....+     ..+  .    +...+.+. .      ...++
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~------~~~ea  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T------DLDVA  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E------CCHHH
Confidence            47999999999999999998872   4    2356777742211     111  1    01123222 1      12478


Q ss_pred             HhcccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCC
Q 013761          224 VENCNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNN  264 (437)
Q Consensus       224 ~~~~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gv  264 (437)
                      ++++|+||-.||.....   -.+.++.|..-...+.+++.++..
T Consensus       197 ~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~  240 (452)
T cd05295         197 FKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAK  240 (452)
T ss_pred             hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            89999999999975432   356889999988999998888775

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=94.88  E-value=0.17  Score=51.29  Aligned_cols=59  Identities=12%  Similarity=0.124  Sum_probs=49.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|-+.-+|+-++..|+++|++|+++-....                      ++++....+|+||-++|..
T Consensus       211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~----------------------nl~~~~~~ADIvIsAvGkp  268 (345)
T PLN02897        211 EIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTK----------------------DPEQITRKADIVIAAAGIP  268 (345)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCC----------------------CHHHHHhhCCEEEEccCCc
Confidence            378999999999999999999999999999988754321                      1356777889999999875


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       269 ~  269 (345)
T PLN02897        269 N  269 (345)
T ss_pred             C
Confidence            4

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.87  E-value=0.19  Score=53.44  Aligned_cols=76  Identities=16%  Similarity=0.164  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+.+++|+|.| .|+.|.++++.|++.|++|.+.|++.... .+.+ ..++.+..++- +.    +.++++|.||...|
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~-~~~l~~~gi~~~~~~~-~~----~~~~~~d~vV~Spg   83 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETAR-HKLIEVTGVADISTAE-AS----DQLDSFSLVVTSPG   83 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHH-HHHHHhcCcEEEeCCC-ch----hHhcCCCEEEeCCC
Confidence            346788999998 58899999999999999999999865431 1111 12455544321 11    23457899999999


Q ss_pred             CCCC
Q 013761          236 ARST  239 (437)
Q Consensus       236 ~~~~  239 (437)
                      +...
T Consensus        84 i~~~   87 (473)
T PRK00141         84 WRPD   87 (473)
T ss_pred             CCCC
Confidence            8643

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.86  E-value=0.19  Score=50.15  Aligned_cols=59  Identities=15%  Similarity=0.279  Sum_probs=48.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC----CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLR----GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~----G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.||+|+|.|.|.-+|+-|+..|+++    |++|+++-...                      .++++.++.+|+||-+
T Consensus       158 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T----------------------~~l~~~~~~ADIvVsA  215 (297)
T PRK14168        158 ETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRS----------------------KNLARHCQRADILIVA  215 (297)
T ss_pred             CCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCC----------------------cCHHHHHhhCCEEEEe
Confidence            378999999999999999999999998    78898875432                      1255677888999999


Q ss_pred             ccCCC
Q 013761          234 ATARS  238 (437)
Q Consensus       234 Ag~~~  238 (437)
                      +|...
T Consensus       216 vGkp~  220 (297)
T PRK14168        216 AGVPN  220 (297)
T ss_pred             cCCcC
Confidence            98654

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=94.83  E-value=0.14  Score=52.00  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=48.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh-hCCCCeEEEEecCCCH----HHHHHHH-hcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD-MLPRSVEIVLGDVGDP----CTLKAAV-ENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~-~~~~~v~~v~~Dltd~----~~v~~a~-~~~D~VIh  232 (437)
                      .+.+|||+||+|++|..+++.+...|++|++++++.+. +.+. .++... ++  |..+.    +.+.++. .++|++|.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~-vi--~~~~~~~~~~~i~~~~~~gvD~v~d  234 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AF--NYKEEPDLDAALKRYFPEGIDIYFD  234 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE-EE--ECCCcccHHHHHHHHCCCCcEEEEE
Confidence            47899999999999999998888899999988876553 2222 343321 22  32221    1222222 25799999


Q ss_pred             ecc
Q 013761          233 CAT  235 (437)
Q Consensus       233 ~Ag  235 (437)
                      +.|
T Consensus       235 ~vG  237 (348)
T PLN03154        235 NVG  237 (348)
T ss_pred             CCC
Confidence            887

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.82  E-value=0.5  Score=45.76  Aligned_cols=96  Identities=14%  Similarity=0.216  Sum_probs=62.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH------------------------HHHhhCCCC--eEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ------------------------EVVDMLPRS--VEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~------------------------~~~~~~~~~--v~~v~  211 (437)
                      +...+|+|.|+ |++|..+++.|+..|. +++++|.+.-+                        +.+..+.+.  +..+.
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            56678999976 8999999999999995 78888775310                        011112223  34444


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceee
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQ  268 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~  268 (437)
                      ..+ +.+.+.++++++|+||.+...    +        ..-..+-+++.+.++.+..
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~----~--------~~r~~ln~~~~~~~ip~v~  144 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDN----V--------EVRNQLNRQCFAAKVPLVS  144 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCC----H--------HHHHHHHHHHHHcCCCEEE
Confidence            344 345677888899999987632    1        1223456778787766543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.77  E-value=0.1  Score=51.85  Aligned_cols=59  Identities=15%  Similarity=0.259  Sum_probs=49.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-|+..|+.+|++|+++.....                      ++.+....+|+||.++|..
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~----------------------~l~~~~~~ADIvv~AvG~p  218 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD----------------------DLKKYTLDADILVVATGVK  218 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC----------------------CHHHHHhhCCEEEEccCCc
Confidence            478999999999999999999999999999998864321                      2456777889999999875


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       219 ~  219 (287)
T PRK14176        219 H  219 (287)
T ss_pred             c
Confidence            4

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.76  E-value=0.031  Score=55.92  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=31.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++|.|.| +|.+|..++..|++.|++|++.+|+.+
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            4799998 799999999999999999999999865

>PLN02494 adenosylhomocysteinase

Probab=94.75  E-value=0.14  Score=54.17  Aligned_cols=68  Identities=12%  Similarity=0.151  Sum_probs=48.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++++|.|. |.||+.+++.+...|++|+++++++..... .......++        .+++++..+|+||.+.|.
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~e-A~~~G~~vv--------~leEal~~ADVVI~tTGt  319 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQ-ALMEGYQVL--------TLEDVVSEADIFVTTTGN  319 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHH-HHhcCCeec--------cHHHHHhhCCEEEECCCC
Confidence            67999999977 799999999999999999999887653111 111122221        134577788999986653

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.70  E-value=0.13  Score=50.61  Aligned_cols=73  Identities=18%  Similarity=0.221  Sum_probs=49.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH---HHHHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP---CTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~---~~v~~a~~--~~D~VIh~  233 (437)
                      .+.+++|.||+|.+|.++++.+...|++|+++.++.+. +.+...+.. .++  +..+.   +.+.++..  ++|+||.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~i~~~~~~~~~d~v~d~  215 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIG-PVV--STEQPGWQDKVREAAGGAPISVALDS  215 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCC-EEE--cCCCchHHHHHHHHhCCCCCcEEEEC
Confidence            46799999999999999999999999999998876652 222333221 222  22222   23444443  47999998


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       216 ~g  217 (324)
T cd08292         216 VG  217 (324)
T ss_pred             CC
Confidence            87

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.69  E-value=0.08  Score=54.83  Aligned_cols=94  Identities=18%  Similarity=0.192  Sum_probs=63.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-e----EE--EE--ecCCcH---HHHhhCC------CCeEEEEecCCCHHHHHHHH
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-S----VK--AL--VRKADQ---EVVDMLP------RSVEIVLGDVGDPCTLKAAV  224 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-~----V~--~~--~R~~~~---~~~~~~~------~~v~~v~~Dltd~~~v~~a~  224 (437)
                      +|.|+||+|.+|.+++-.|+..|. .    |.  ++  +++.+.   ...+...      ..+.+..   .|    .+.+
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~----y~~~  118 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DP----YEVF  118 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CC----HHHh
Confidence            899999999999999999998873 3    33  33  655542   1111111      1121111   12    4678


Q ss_pred             hcccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          225 ENCNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       225 ~~~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      +++|+||..||....+   -.+.+..|+.-...+.+.+.++.
T Consensus       119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a  160 (387)
T TIGR01757       119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVA  160 (387)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8899999999985432   34689999999999999998854

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=94.67  E-value=0.21  Score=50.95  Aligned_cols=59  Identities=12%  Similarity=0.158  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+.-+|+-|+..|+++|++|+++-....                      ++++....+|+||-++|..
T Consensus       228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~----------------------nl~~~~r~ADIVIsAvGkp  285 (364)
T PLN02616        228 EIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTK----------------------NPEEITREADIIISAVGQP  285 (364)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCC----------------------CHHHHHhhCCEEEEcCCCc
Confidence            478999999999999999999999999999998754321                      2456677889999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       286 ~  286 (364)
T PLN02616        286 N  286 (364)
T ss_pred             C
Confidence            4

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.67  E-value=0.31  Score=48.66  Aligned_cols=95  Identities=19%  Similarity=0.258  Sum_probs=66.0

Q ss_pred             EEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH--HHhhC----C--CCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          164 VLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE--VVDML----P--RSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~--~~~~~----~--~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      |.|.|+ |.+|..++-.|+..|  .+++++|++.+..  ...++    .  ....+..+  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            457776 889999999999998  6899999987621  11111    1  11122211  22    3578899999999


Q ss_pred             ccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          234 ATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       234 Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ||....+   ..+.+..|+.-...+.+.+++++.+
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~  108 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPD  108 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9975422   3457888999899999999888765

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK07574 formate dehydrogenase; Provisional

Probab=94.65  E-value=0.084  Score=54.68  Aligned_cols=69  Identities=25%  Similarity=0.284  Sum_probs=51.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+|+|.|.|. |.||+.++++|...|++|+..+|.... +.....         ++.-..+++++++.+|+|+.+...
T Consensus       189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~---------g~~~~~~l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQEL---------GLTYHVSFDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhc---------CceecCCHHHHhhcCCEEEEcCCC
Confidence            478999999976 899999999999999999999987532 111111         121123577889999999888754

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=94.64  E-value=0.13  Score=50.87  Aligned_cols=73  Identities=19%  Similarity=0.196  Sum_probs=48.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhh-CCCCeEEEEecCCCHHH---HHHHH-hcccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDM-LPRSVEIVLGDVGDPCT---LKAAV-ENCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~-~~~~v~~v~~Dltd~~~---v~~a~-~~~D~VIh~  233 (437)
                      .+.+++|.|++|.+|..+++.+...|++|++++++.+. +.... ++.. .++  |..+.+.   +.+.. .++|++|++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~v~~~~~~~~d~vi~~  221 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD-AAI--NYKTPDLAEALKEAAPDGIDVYFDN  221 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc-eEE--ecCChhHHHHHHHhccCCceEEEEc
Confidence            35799999999999999999999999999999876542 22222 3221 222  2233222   22222 357999998


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       222 ~g  223 (329)
T cd05288         222 VG  223 (329)
T ss_pred             ch
Confidence            76

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=94.63  E-value=0.12  Score=51.69  Aligned_cols=73  Identities=21%  Similarity=0.247  Sum_probs=48.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcH-HHHhhCCCCeEEEEecCCC--HHHHHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQ-EVVDMLPRSVEIVLGDVGD--PCTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd--~~~v~~a~~--~~D~VIh~  233 (437)
                      .+.+|+|+|+ |.+|..+++.+...|++ |++++++.+. +....++.. .+  .|..+  .+.+.++..  ++|+||.+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~-~~--i~~~~~~~~~~~~~~~~~~~d~vid~  238 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGAD-FV--INSGQDDVQEIRELTSGAGADVAIEC  238 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-EE--EcCCcchHHHHHHHhCCCCCCEEEEC
Confidence            3789999986 99999999988889998 9988876653 223334322 11  23333  334444443  57999998


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      .|.
T Consensus       239 ~g~  241 (339)
T cd08239         239 SGN  241 (339)
T ss_pred             CCC
Confidence            863

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.56  E-value=0.16  Score=52.27  Aligned_cols=70  Identities=23%  Similarity=0.263  Sum_probs=53.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~A  234 (437)
                      .|+|+|+|+ |.+|+.++..+.+.|++|++++.++...... ..+  .++..|..|.+.+.++++  ++|.|+-..
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~-~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-VAH--RSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH-hhh--heEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            468999986 6899999999999999999999876531111 111  245678899999999888  689887643

>PLN03139 formate dehydrogenase; Provisional

Probab=94.56  E-value=0.092  Score=54.41  Aligned_cols=68  Identities=21%  Similarity=0.271  Sum_probs=50.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++.+|+|.|.| .|.||+.+++.|...|++|+..+|.... +.....  .+.       -.+++++++..+|+|+.+.-
T Consensus       196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~--g~~-------~~~~l~ell~~sDvV~l~lP  264 (386)
T PLN03139        196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKET--GAK-------FEEDLDAMLPKCDVVVINTP  264 (386)
T ss_pred             CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhc--Cce-------ecCCHHHHHhhCCEEEEeCC
Confidence            48899999998 5999999999999999999999886432 111111  111       12357788899999998864

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.53  E-value=0.15  Score=53.31  Aligned_cols=67  Identities=15%  Similarity=0.141  Sum_probs=48.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++|+|.|+ |.||+.+++.+...|++|+++++++.. ......  .+..+     +   +++++.++|+||.+.|.
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~--G~~~~-----~---~~e~v~~aDVVI~atG~  267 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAME--GYEVM-----T---MEEAVKEGDIFVTTTGN  267 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhc--CCEEc-----c---HHHHHcCCCEEEECCCC
Confidence            57899999987 789999999999999999999887653 122222  22222     1   23566788999998763

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.53  E-value=0.12  Score=51.80  Aligned_cols=72  Identities=19%  Similarity=0.279  Sum_probs=56.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHHHhhCCCCeEEEEecCC-CHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVG-DPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~~~~~~~~v~~v~~Dlt-d~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .|+.+.|+|+.| ||.--++.-.+.|++|+++++...  +++.+.++..  ++ .|.+ |++.++++.+..|.++|++.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd--~f-v~~~~d~d~~~~~~~~~dg~~~~v~  255 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD--VF-VDSTEDPDIMKAIMKTTDGGIDTVS  255 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc--ee-EEecCCHHHHHHHHHhhcCcceeee
Confidence            589999999988 999888777788999999999863  4455556443  33 3555 88888888888888888875

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.53  E-value=0.11  Score=53.16  Aligned_cols=36  Identities=25%  Similarity=0.355  Sum_probs=29.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKA  195 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~  195 (437)
                      ++++|+|+||||++|++|++.|+... .+++++.++.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            45799999999999999999998765 4888875554

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.52  E-value=0.69  Score=40.58  Aligned_cols=89  Identities=15%  Similarity=0.198  Sum_probs=57.4

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc-------------H-----------HHHhhCCC--CeEEEEecCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD-------------Q-----------EVVDMLPR--SVEIVLGDVG  215 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~-------------~-----------~~~~~~~~--~v~~v~~Dlt  215 (437)
                      +|+|.|+ |++|.++++.|+..|. +++++|.+.-             .           +.+..+.+  .+..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788887 9999999999999997 6888886521             0           01111222  3444555554


Q ss_pred             CHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          216 DPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       216 d~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +. ...+.+.++|+||.+...            ......+.+.+++.++.
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~------------~~~~~~l~~~~~~~~i~  116 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN------------IAVRRALNRACKELGIP  116 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC------------HHHHHHHHHHHHHcCCC
Confidence            43 346777889999988642            12234566778777754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.51  E-value=0.075  Score=52.74  Aligned_cols=74  Identities=19%  Similarity=0.276  Sum_probs=48.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhCCCCe-EEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDMLPRSV-EIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~~~~v-~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ..+++++|.|| ||.+++++..|++.| .+|+++.|+.+.  +..+.+.... .....++.+.+...    .+|+|||+-
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINaT  198 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINAT  198 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEECC
Confidence            45789999987 889999999999999 579999998763  2222232211 11122332322222    679999987


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      ...
T Consensus       199 p~G  201 (283)
T COG0169         199 PVG  201 (283)
T ss_pred             CCC
Confidence            553

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.47  E-value=0.18  Score=50.42  Aligned_cols=73  Identities=16%  Similarity=0.211  Sum_probs=48.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHH--hcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAV--ENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~--~~~D~VIh~Ag  235 (437)
                      .+.+++|+|++|.+|.++++.+...|++|+++.++........++.. .+  .|..+.+....+.  .++|++|++.|
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~l~~~~~vd~vi~~~g  236 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGAD-DV--IDYNNEDFEEELTERGKFDVILDTVG  236 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCc-eE--EECCChhHHHHHHhcCCCCEEEECCC
Confidence            37899999999999999999988999999888765322233333321 11  2333333233222  35799999876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.46  E-value=0.59  Score=47.93  Aligned_cols=95  Identities=13%  Similarity=0.102  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH------------------------HHHhhCCC--CeEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ------------------------EVVDMLPR--SVEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~------------------------~~~~~~~~--~v~~v~  211 (437)
                      +...+|+|.|+ ||+|.++++.|+..|. +++++|.+.-+                        +.+.++..  .++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            56679999987 8999999999999995 78888875310                        01112222  345555


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCcee
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLA  267 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~  267 (437)
                      ..++ .+...++++++|+||.+..-            ...-..+.++|.+.++.+.
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d~------------~~~r~~~n~~c~~~~ip~v  147 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSDN------------FDTRHLASWAAARLGIPHV  147 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCC------------HHHHHHHHHHHHHcCCCEE
Confidence            5665 45567788999999998631            1222345667888886543

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.45  E-value=0.18  Score=49.59  Aligned_cols=73  Identities=16%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~--~~D~VIh~  233 (437)
                      .+..++|+|++|.+|..+++.+...|++|++++++.+. +.+..+... .+  .|..+.+   .+.+...  ++|+++++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vl~~  218 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGAD-VA--VDYTRPDWPDQVREALGGGGVTVVLDG  218 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EE--EecCCccHHHHHHHHcCCCCceEEEEC
Confidence            35689999999999999999999999999999887653 223333321 12  2333332   2333333  47999998


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      .|
T Consensus       219 ~g  220 (324)
T cd08244         219 VG  220 (324)
T ss_pred             CC
Confidence            76

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=94.45  E-value=0.11  Score=53.11  Aligned_cols=69  Identities=17%  Similarity=0.330  Sum_probs=41.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC---eEEEEecCC-cHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY---SVKALVRKA-DQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~---~V~~~~R~~-~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .++|.|.||||.+|++|++.|.++++   ++..+.... ....... . ...+...++. .    +.++++|+||.+++.
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~-~~~~~v~~~~-~----~~~~~~D~vf~a~p~   79 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-E-GRDYTVEELT-E----DSFDGVDIALFSAGG   79 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-c-CceeEEEeCC-H----HHHcCCCEEEECCCc
Confidence            45899999999999999999998887   333333221 1111111 1 1222333332 2    234789999988853

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.38  E-value=0.11  Score=56.47  Aligned_cols=70  Identities=19%  Similarity=0.363  Sum_probs=54.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHH-hcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAV-ENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~-~~~D~VIh~A  234 (437)
                      .+++|.|+ |.+|+++++.|.++|++|+++|.+++. +..+  ..+..++.+|.+|++.++++- +++|.++-+.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~--~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR--ERGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH--HCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            46788865 889999999999999999999988663 1222  246889999999999887653 5678776543

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=94.38  E-value=0.48  Score=46.15  Aligned_cols=91  Identities=16%  Similarity=0.134  Sum_probs=67.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~~  238 (437)
                      +++|||.|||+ =|+.|++.|.+.|+.|++..-.....   .....+.+..+-+.|.+++.+++.  ++++||...    
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDAT----   73 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDAT----   73 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECC----
Confidence            56899999986 58999999999999988876654322   112356778888889999999997  479998864    


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +++...      -+.++.++|++.++.
T Consensus        74 HPfA~~------is~~a~~ac~~~~ip   94 (248)
T PRK08057         74 HPYAAQ------ISANAAAACRALGIP   94 (248)
T ss_pred             CccHHH------HHHHHHHHHHHhCCc
Confidence            334332      235688899988865

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.38  E-value=0.15  Score=48.27  Aligned_cols=73  Identities=19%  Similarity=0.196  Sum_probs=47.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH----HhcccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA----VENCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a----~~~~D~VIh~A  234 (437)
                      .+.+|+|+|+++ +|..+++.+...|.+|++++++.+. +........ .+  .|..+.+....+    -.++|++|+++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~  209 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGAD-HV--IDYKEEDLEEELRLTGGGGADVVIDAV  209 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCc-ee--ccCCcCCHHHHHHHhcCCCCCEEEECC
Confidence            467999999998 9999999998999999999887652 222222211 11  233333222222    13479999998


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      +.
T Consensus       210 ~~  211 (271)
T cd05188         210 GG  211 (271)
T ss_pred             CC
Confidence            64

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.38  E-value=0.27  Score=49.05  Aligned_cols=59  Identities=17%  Similarity=0.280  Sum_probs=48.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC----CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLR----GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~----G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.||+|+|.|.+..+|+-|+..|+++    +++|+++-...                      .++++..+.+|+||-+
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T----------------------~~l~~~~~~ADIvIsA  211 (297)
T PRK14167        154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRT----------------------DDLAAKTRRADIVVAA  211 (297)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCC----------------------CCHHHHHhhCCEEEEc
Confidence            378999999999999999999999988    78998864322                      1245677888999999


Q ss_pred             ccCCC
Q 013761          234 ATARS  238 (437)
Q Consensus       234 Ag~~~  238 (437)
                      +|...
T Consensus       212 vGkp~  216 (297)
T PRK14167        212 AGVPE  216 (297)
T ss_pred             cCCcC
Confidence            98754

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.37  E-value=0.2  Score=47.52  Aligned_cols=74  Identities=14%  Similarity=0.223  Sum_probs=52.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC---cH--------------------HHHhhCCC--CeEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA---DQ--------------------EVVDMLPR--SVEIVLG  212 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~---~~--------------------~~~~~~~~--~v~~v~~  212 (437)
                      +...+|+|.|+ |++|..+++.|+..|. +++++|.+.   ++                    ..+..+..  .++.+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            56779999986 8999999999999996 588888862   10                    01112222  3455555


Q ss_pred             cCCCHHHHHHHHhcccEEEEec
Q 013761          213 DVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       213 Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      .+++ +.+.++++++|+||.+.
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~  125 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAF  125 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECC
Confidence            6654 55677888999999874

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.30  E-value=0.14  Score=50.77  Aligned_cols=59  Identities=20%  Similarity=0.266  Sum_probs=48.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-|+..|.++|++|+++.....                      ++.+..+.+|+||-++|..
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~----------------------dl~~~~k~ADIvIsAvGkp  212 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT----------------------DLKSHTTKADILIVAVGKP  212 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC----------------------CHHHHhhhcCEEEEccCCc
Confidence            378999999999999999999999999999998865432                      2445577789999998865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       213 ~  213 (282)
T PRK14180        213 N  213 (282)
T ss_pred             C
Confidence            4

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.26  E-value=0.62  Score=45.89  Aligned_cols=94  Identities=14%  Similarity=0.114  Sum_probs=60.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH------------------------HHHhhCCCC--eEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ------------------------EVVDMLPRS--VEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~------------------------~~~~~~~~~--v~~v~  211 (437)
                      |...+|+|.|+ |++|+++++.|+..| -+++++|.+.-.                        +.+..+...  +..+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            66778999976 899999999999999 588888865210                        001112223  33332


Q ss_pred             ecCCCHHHHHHHHh-cccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          212 GDVGDPCTLKAAVE-NCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       212 ~Dltd~~~v~~a~~-~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                       +..+++.+.+++. ++|+||.+....            ..-..+.+.|.+.++.+
T Consensus       107 -~~i~~e~~~~ll~~~~D~VIdaiD~~------------~~k~~L~~~c~~~~ip~  149 (268)
T PRK15116        107 -DFITPDNVAEYMSAGFSYVIDAIDSV------------RPKAALIAYCRRNKIPL  149 (268)
T ss_pred             -cccChhhHHHHhcCCCCEEEEcCCCH------------HHHHHHHHHHHHcCCCE
Confidence             3334566667764 689999886421            12235777888877654

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.25  E-value=0.17  Score=49.95  Aligned_cols=72  Identities=25%  Similarity=0.285  Sum_probs=47.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC--HHHHHHHH-hcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD--PCTLKAAV-ENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd--~~~v~~a~-~~~D~VIh~Ag  235 (437)
                      +.+++|.|++|.+|..+++.+...|++|++++++.+. +....++.. .+  .|..+  .+.+.++- .++|+||.+.|
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~d~vld~~g  222 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAK-EV--IPREELQEESIKPLEKQRWAGAVDPVG  222 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCC-EE--EcchhHHHHHHHhhccCCcCEEEECCc
Confidence            5699999999999999999999999999999887653 223333321 11  22222  22333331 24799998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.24  E-value=0.16  Score=51.14  Aligned_cols=72  Identities=11%  Similarity=0.115  Sum_probs=47.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh~A  234 (437)
                      .+.+|+|+|+ |++|...++.+...|+ +|++++++++. +....++... +  .|..+. ++.+..+   ++|++|.++
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~-v--i~~~~~-~~~~~~~~~g~~D~vid~~  243 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADK-L--VNPQND-DLDHYKAEKGYFDVSFEVS  243 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcE-E--ecCCcc-cHHHHhccCCCCCEEEECC
Confidence            4779999986 9999999998888998 68888887653 3334444322 1  233332 2333322   379999998


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      |.
T Consensus       244 G~  245 (343)
T PRK09880        244 GH  245 (343)
T ss_pred             CC
Confidence            73

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.19  E-value=0.12  Score=56.70  Aligned_cols=93  Identities=22%  Similarity=0.322  Sum_probs=66.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag~~~~  239 (437)
                      .+|+|.| .|.+|+.+++.|.++|++++++|.+++. +..++  .+..++.+|.+|++.++++ ++++|.+|-+-.-   
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~--~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d---  474 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK--YGYKVYYGDATQLELLRAAGAEKAEAIVITCNE---  474 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh--CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC---
Confidence            5788887 4899999999999999999999988763 12222  3678899999999988876 4667888766421   


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCceeee
Q 013761          240 ITGDLFRVDYQGVYNVTKAFQDFNNKLAQL  269 (437)
Q Consensus       240 ~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l  269 (437)
                       .    +.|    ..+++.+++...+...+
T Consensus       475 -~----~~n----~~i~~~~r~~~p~~~Ii  495 (601)
T PRK03659        475 -P----EDT----MKIVELCQQHFPHLHIL  495 (601)
T ss_pred             -H----HHH----HHHHHHHHHHCCCCeEE
Confidence             1    223    34666666665543333

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=94.18  E-value=0.21  Score=53.63  Aligned_cols=76  Identities=24%  Similarity=0.211  Sum_probs=51.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC--------------H--HHHHH
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD--------------P--CTLKA  222 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd--------------~--~~v~~  222 (437)
                      .+.+|+|+|+ |.+|...+..+...|++|+++|++.+. +..+.++  .+++..|..+              .  +...+
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslG--A~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMG--AEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4679999987 899999999999999999999998763 2333443  3333333322              1  11122


Q ss_pred             H----HhcccEEEEeccCCC
Q 013761          223 A----VENCNKIIYCATARS  238 (437)
Q Consensus       223 a----~~~~D~VIh~Ag~~~  238 (437)
                      .    ..++|+||.++++..
T Consensus       241 ~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHhccCCCCEEEECCCCCc
Confidence            2    246899999999754

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.16  E-value=0.32  Score=47.24  Aligned_cols=94  Identities=15%  Similarity=0.208  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc---H---------------------HHHhhCCC--CeEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD---Q---------------------EVVDMLPR--SVEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~---~---------------------~~~~~~~~--~v~~v~  211 (437)
                      +..++|+|.|+ |++|.++++.|+..|. +++++|.+.-   +                     +.+..+.+  .++.+.
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            56789999988 9999999999999995 7888876421   0                     01112222  345555


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                      ..++ .+.+.++++++|+||.+..-    +        ..-..+.+++.++++.+
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D~----~--------~~r~~ln~~~~~~~ip~  150 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTDN----V--------ATRNQLNRACFAAKKPL  150 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCCC----H--------HHHHHHHHHHHHhCCEE
Confidence            5554 45677888999999988631    1        12234556777776543

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.13  E-value=0.33  Score=48.19  Aligned_cols=59  Identities=12%  Similarity=0.145  Sum_probs=48.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHH----CCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLML----RGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~----~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.||+|+|.|.+.-+|+-|+..|++    +|++|+++..+.                      ..+.+.+..+|+||-+
T Consensus       154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t----------------------~~l~~~~~~ADIVI~A  211 (286)
T PRK14184        154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRT----------------------PDLAEECREADFLFVA  211 (286)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCc----------------------hhHHHHHHhCCEEEEe
Confidence            37899999999999999999999998    789998876432                      2366788888999998


Q ss_pred             ccCCC
Q 013761          234 ATARS  238 (437)
Q Consensus       234 Ag~~~  238 (437)
                      +|...
T Consensus       212 vG~p~  216 (286)
T PRK14184        212 IGRPR  216 (286)
T ss_pred             cCCCC
Confidence            87543

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=94.09  E-value=0.29  Score=48.32  Aligned_cols=59  Identities=15%  Similarity=0.256  Sum_probs=48.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.|++++|.|.|.-+|+-++..|+..+++|.++-....                      .+.+..+.+|+||-+.|..
T Consensus       153 ~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~----------------------~l~~~~k~ADIvv~AvG~p  210 (283)
T COG0190         153 DLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTK----------------------DLASITKNADIVVVAVGKP  210 (283)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCC----------------------CHHHHhhhCCEEEEecCCc
Confidence            589999999999999999999999999999998865432                      1345666779999888764


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       211 ~  211 (283)
T COG0190         211 H  211 (283)
T ss_pred             c
Confidence            3

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.09  E-value=0.4  Score=47.76  Aligned_cols=59  Identities=15%  Similarity=0.263  Sum_probs=47.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC----CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLR----GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~----G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.||+|+|.|.+.-+|+-|+..|+++    +++|+++-....                      .+.+....+|+||-+
T Consensus       154 ~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~----------------------nl~~~~~~ADIvIsA  211 (293)
T PRK14185        154 ETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSK----------------------NLKKECLEADIIIAA  211 (293)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCC----------------------CHHHHHhhCCEEEEc
Confidence            378999999999999999999999988    588887643321                      245667778999999


Q ss_pred             ccCCC
Q 013761          234 ATARS  238 (437)
Q Consensus       234 Ag~~~  238 (437)
                      +|...
T Consensus       212 vGkp~  216 (293)
T PRK14185        212 LGQPE  216 (293)
T ss_pred             cCCcC
Confidence            98654

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.09  E-value=0.3  Score=49.78  Aligned_cols=72  Identities=19%  Similarity=0.272  Sum_probs=49.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+.+|+|.|+ |+||..+++.+...|++|++++.+.+.  +..+.++.  ..+ .|..+.+.+.+...++|+||.+.|
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga--~~v-i~~~~~~~~~~~~~~~D~vid~~g  256 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGA--DSF-LVSTDPEKMKAAIGTMDYIIDTVS  256 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCC--cEE-EcCCCHHHHHhhcCCCCEEEECCC
Confidence            4679999775 999999999888899999888776542  22233332  211 233444455555556899999887

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.08  E-value=0.24  Score=39.82  Aligned_cols=34  Identities=29%  Similarity=0.387  Sum_probs=30.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVR  193 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R  193 (437)
                      +.+++++|.|+ |.+|+.++..|.+. +.+|.+.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            67889999999 99999999999998 577888776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.08  E-value=0.23  Score=48.28  Aligned_cols=75  Identities=19%  Similarity=0.170  Sum_probs=48.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+..++|+|++|.+|..+++.+...|++|++++++.+. +.+...... .++..+..+ .+.+.....  ++|.++++.|
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g  217 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGAD-HVIDYRDPDLRERVKALTGGRGVDVVYDPVG  217 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCc-eeeecCCccHHHHHHHHcCCCCcEEEEECcc
Confidence            46799999999999999999999999999999887542 222223221 122222111 123333333  4799999876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.00  E-value=0.22  Score=50.17  Aligned_cols=68  Identities=18%  Similarity=0.235  Sum_probs=51.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+++|.|.|- |.||+.+++.|...|++|++.+|..+..      ..+..+    ...++++++++++|+|+.+...
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~------~~~~~~----~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW------PGVQSF----AGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC------CCceee----cccccHHHHHhcCCEEEECCCC
Confidence            368899999964 9999999999999999999998864321      011111    1345788999999999988754

>TIGR00936 ahcY adenosylhomocysteinase

Probab=93.91  E-value=0.2  Score=52.22  Aligned_cols=67  Identities=13%  Similarity=0.091  Sum_probs=47.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++|+|.|. |.||+.+++.|...|++|+++++++..... .......++     +   ++++++++|+||.+.|
T Consensus       193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~-A~~~G~~v~-----~---leeal~~aDVVItaTG  259 (406)
T TIGR00936       193 IAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALE-AAMDGFRVM-----T---MEEAAKIGDIFITATG  259 (406)
T ss_pred             CCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHH-HHhcCCEeC-----C---HHHHHhcCCEEEECCC
Confidence            67899999985 899999999999999999999887653211 111122221     2   2346678899998765

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.90  E-value=0.23  Score=51.76  Aligned_cols=75  Identities=23%  Similarity=0.364  Sum_probs=58.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.++++||.|| |=+|.-++++|+.+| .+|+++.|..+.  +..+.++       +++...+.+...+..+|+||.+-
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-------~~~~~l~el~~~l~~~DvVissT  246 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-------AEAVALEELLEALAEADVVISST  246 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-------CeeecHHHHHHhhhhCCEEEEec
Confidence            378899999988 889999999999999 678888887663  2233443       45556677888999999999997


Q ss_pred             cCCCCc
Q 013761          235 TARSTI  240 (437)
Q Consensus       235 g~~~~~  240 (437)
                      |...+.
T Consensus       247 sa~~~i  252 (414)
T COG0373         247 SAPHPI  252 (414)
T ss_pred             CCCccc
Confidence            765543

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=93.90  E-value=0.13  Score=51.33  Aligned_cols=73  Identities=16%  Similarity=0.236  Sum_probs=46.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEE-----EEecCCCHHHHHHHHhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEI-----VLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~-----v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      |+|.|.|+ |.+|..++..|++.|++|.+++|+.+. +...........     +...+.-..+.+++++++|+||-+.-
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP   80 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence            57999986 999999999999999999999997542 112211100000     00011111234456778899998864

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.90  E-value=0.3  Score=44.87  Aligned_cols=70  Identities=16%  Similarity=0.248  Sum_probs=48.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC---cH--------------------HHHhhCCC--CeEEEEecCCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA---DQ--------------------EVVDMLPR--SVEIVLGDVGD  216 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~---~~--------------------~~~~~~~~--~v~~v~~Dltd  216 (437)
                      +|+|.|+ |++|.++++.|+..|. +++++|.+.   +.                    ..++.+..  .+..+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            4788875 9999999999999997 599998864   10                    01112222  34455555544


Q ss_pred             HHHHHHHHhcccEEEEec
Q 013761          217 PCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       217 ~~~v~~a~~~~D~VIh~A  234 (437)
                       +.+.++++++|+||.+.
T Consensus        80 -~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          80 -NNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             -hhHHHHhcCCCEEEECC
Confidence             56778889999999874

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.87  E-value=0.19  Score=50.22  Aligned_cols=59  Identities=14%  Similarity=0.216  Sum_probs=48.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.|..+|+-|+..|+.+|++|+++.....                      ++++....+|+||-++|..
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~----------------------~l~~~~~~ADIvIsAvGkp  212 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQ----------------------DLASITREADILVAAAGRP  212 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEccCCc
Confidence            478999999999999999999999999999988754321                      2456777889999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       213 ~  213 (297)
T PRK14186        213 N  213 (297)
T ss_pred             C
Confidence            4

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.85  E-value=0.21  Score=53.05  Aligned_cols=74  Identities=19%  Similarity=0.197  Sum_probs=52.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +.+++|+|.|+ |++|.++++.|.++|++|++++++...   ...+.+ ..++.+..++-..      ....+|.||...
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~   86 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTSP   86 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECC
Confidence            56889999987 889999999999999999999876531   111222 2356665544222      234679999999


Q ss_pred             cCCCC
Q 013761          235 TARST  239 (437)
Q Consensus       235 g~~~~  239 (437)
                      |+...
T Consensus        87 Gi~~~   91 (480)
T PRK01438         87 GWRPD   91 (480)
T ss_pred             CcCCC
Confidence            87543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=93.83  E-value=0.31  Score=44.39  Aligned_cols=71  Identities=15%  Similarity=0.212  Sum_probs=47.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---------cccEEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---------NCNKIIY  232 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---------~~D~VIh  232 (437)
                      .+|+|-||-|-+|+++++.|.+++|.|.-+|-.+.++.     +.-.++.+|-+=.++-+.+++         .+|.||+
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~C   78 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFC   78 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEEE
Confidence            48999999999999999999999999998887654311     112233344332222222222         2599999


Q ss_pred             eccCC
Q 013761          233 CATAR  237 (437)
Q Consensus       233 ~Ag~~  237 (437)
                      .||-.
T Consensus        79 VAGGW   83 (236)
T KOG4022|consen   79 VAGGW   83 (236)
T ss_pred             eeccc
Confidence            99853

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.82  E-value=0.17  Score=50.51  Aligned_cols=36  Identities=22%  Similarity=0.332  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      .+|+|.|.|+ |.+|.++++.|+..|++|.+.+|+..
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3467888855 99999999999999999999999764

>PRK08328 hypothetical protein; Provisional

Probab=93.80  E-value=0.42  Score=45.90  Aligned_cols=95  Identities=15%  Similarity=0.245  Sum_probs=60.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH----------------H---------HHhhCCC--CeEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ----------------E---------VVDMLPR--SVEIV  210 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~----------------~---------~~~~~~~--~v~~v  210 (437)
                      +.+.+|+|.|+ ||+|.++++.|+..|. +++++|.+.-+                .         .+..+.+  .+..+
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            55678999976 8999999999999995 68888754310                0         0111122  34444


Q ss_pred             EecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCcee
Q 013761          211 LGDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLA  267 (437)
Q Consensus       211 ~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~  267 (437)
                      ...+ +.+.+.++++++|+||.+..-    +        ..-..+.++|++.++.+.
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~----~--------~~r~~l~~~~~~~~ip~i  147 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDN----F--------ETRYLLDDYAHKKGIPLV  147 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCC----H--------HHHHHHHHHHHHcCCCEE
Confidence            5555 445577788889999887532    1        111234567777775543

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.80  E-value=0.25  Score=47.79  Aligned_cols=75  Identities=15%  Similarity=0.123  Sum_probs=48.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH-HHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP-CTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~-~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+.+++|.|++|.+|..+++.+...|++|++++++.+. +.+..++.. .++..+-.+. +.+.....  ++|.++++.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~  214 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGAD-HVINYRDEDFVERVREITGGRGVDVVYDGVG  214 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCC-EEEeCCchhHHHHHHHHcCCCCeeEEEECCC
Confidence            46799999999999999999999999999998876542 222333321 1222111111 22333332  4799999876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK06487 glycerate dehydrogenase; Provisional

Probab=93.79  E-value=0.16  Score=51.14  Aligned_cols=64  Identities=14%  Similarity=0.112  Sum_probs=49.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+|++.|.|- |.||+++++.|..-|.+|++.+|.....       .+        +..+++++++.+|+|+.+.-.+
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~-------~~--------~~~~l~ell~~sDiv~l~lPlt  208 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPA-------RP--------DRLPLDELLPQVDALTLHCPLT  208 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcc-------cc--------cccCHHHHHHhCCEEEECCCCC
Confidence            478999999976 9999999999999999999988753210       11        1225788999999998877543

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=93.79  E-value=0.27  Score=48.68  Aligned_cols=73  Identities=18%  Similarity=0.221  Sum_probs=47.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHH-hcccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAV-ENCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~-~~~D~VIh~A  234 (437)
                      .+.+++|.|++|.+|.++++.+...|++|++++++.+. +.+..++.. .++  |..+.+   .+.+.. .++|.+|++.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~vd~v~~~~  215 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCD-RPI--NYKTEDLGEVLKKEYPKGVDVVYESV  215 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCc-eEE--eCCCccHHHHHHHhcCCCCeEEEECC
Confidence            46799999999999999999888999999998886542 223333321 122  222221   222221 2479999987


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      |
T Consensus       216 g  216 (329)
T cd08250         216 G  216 (329)
T ss_pred             c
Confidence            6

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.76  E-value=0.17  Score=51.29  Aligned_cols=65  Identities=20%  Similarity=0.287  Sum_probs=49.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+.+|+|.|.|. |.||+.+++.|...|++|++.+|+..... .    .+.       -..+++++++.+|+|+.+.-
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~-~----~~~-------~~~~l~ell~~aDiVil~lP  207 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDL-D----FLT-------YKDSVKEAIKDADIISLHVP  207 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhh-h----hhh-------ccCCHHHHHhcCCEEEEeCC
Confidence            378899999976 99999999999999999999998764211 0    011       11346788999999988764

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=93.75  E-value=0.55  Score=40.87  Aligned_cols=91  Identities=16%  Similarity=0.318  Sum_probs=61.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--------------------H----HHhhC--CCCeEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--------------------E----VVDML--PRSVEIVLGD  213 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--------------------~----~~~~~--~~~v~~v~~D  213 (437)
                      .++|+|.|+ |++|+.+++.|+..|. +++++|.+.-+                    +    .+..+  ...+..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            358999977 8899999999999997 78888865210                    0    01111  2246667777


Q ss_pred             CCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          214 VGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       214 ltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      + +.+...++++++|+||.+..-            ...-..+.+.+++.++.
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~------------~~~~~~l~~~~~~~~~p  119 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS------------LAARLLLNEICREYGIP  119 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS------------HHHHHHHHHHHHHTT-E
T ss_pred             c-ccccccccccCCCEEEEecCC------------HHHHHHHHHHHHHcCCC
Confidence            7 556788888999999998532            11223566778777754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.75  E-value=0.2  Score=49.61  Aligned_cols=59  Identities=20%  Similarity=0.289  Sum_probs=49.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+..+|+-|+..|+.+|+.|+++.....                      .+++....+|+||-++|..
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~----------------------nl~~~~~~ADIvIsAvGkp  211 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK----------------------DLSLYTRQADLIIVAAGCV  211 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC----------------------CHHHHHhhCCEEEEcCCCc
Confidence            378999999999999999999999999999998765321                      2556777889999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       212 ~  212 (282)
T PRK14166        212 N  212 (282)
T ss_pred             C
Confidence            4

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=93.72  E-value=0.36  Score=49.60  Aligned_cols=73  Identities=23%  Similarity=0.269  Sum_probs=50.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+++|.|+ |.||..+++.+...|++|++++++.+.  +..+.++.  ..+ .|..+.+.+.+...++|+||.+.|.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa--~~~-i~~~~~~~v~~~~~~~D~vid~~G~  252 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGA--DSF-LVTTDSQKMKEAVGTMDFIIDTVSA  252 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCC--cEE-EcCcCHHHHHHhhCCCcEEEECCCc
Confidence            4679999986 999999999888899999988876542  22333432  211 2333445565555568999999863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	437
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		4e-05
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		1e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-----KADQEVVDMLPRSVEIVL- 211
           G+Q+ TV V GA+  IG  ++ +L+ RGY+V+A VR     K  + ++D+      + L 
Sbjct: 2   GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLW 61
Query: 212 -GDVGDPCTLKAAVENCNKIIYCAT 235
             D+ D  +   A++ C  + + AT
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVAT 86

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDMLPR-----SVEIVLGDVGD 216
           T  VVG T  +  ++++ L+ +GY+V   VR  D Q+ V  L        ++I   D+ D
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTD 70
Query: 217 PCTLKAAVENCNKIIYCAT----ARSTITGDLFRVDYQGVYNVTKA 258
             + +A +  C+ + + AT    A      D+ +   QGV NV KA
Sbjct: 71  ELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKA 116

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	437
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-20
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-19
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-17
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-17
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	9e-16
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-15
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	5e-14
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-11
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	3e-11
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-11
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	7e-11
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-10
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	4e-10
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	6e-10
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	6e-10
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-09
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-09
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	6e-09
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	1e-08
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-08
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-08
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-07
1v0a_A	178	Endoglucanase H; carbohydrate binding module, cell	4e-07
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-06
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	2e-06
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-06
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	3e-06
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-05
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	3e-05
1id1_A	153	Putative potassium channel protein; RCK domain, E.	2e-04
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-04
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-04
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-04
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-04
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-04
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-04
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	6e-04
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	6e-04
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-04

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 88.5 bits (220), Expect = 1e-20
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
             + + GAT + G   + + +  GY V  LVR + + +    PR   +V+GDV     + 
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR-LPSEGPRPAHVVVGDVLQAADVD 62

Query: 222 AAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKA 258
             V   + +I     R+ ++     V  +G  N+  A
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPT--TVMSEGARNIVAA 97

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 86.4 bits (214), Expect = 2e-19
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 22/120 (18%)

Query: 159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEVVDMLPRSVEIVLGDVGD 216
           A   TVLV GA+ R G+IV +KL      +  K LVR A     + +    ++ +GD+ D
Sbjct: 2   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--KEKIGGEADVFIGDITD 59

Query: 217 PCTLKAAVENCNKIIYCATARSTITGDL------------------FRVDYQGVYNVTKA 258
             ++  A +  + ++   +A   +                       +VD+ G  N   A
Sbjct: 60  ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA 119

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 80.9 bits (200), Expect = 1e-17
 Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           VLVVGA  ++ R ++ +L  +G+   A+VR  +Q        + +IV+ ++ +      A
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEE--DFSHA 81

Query: 224 VENCNKIIYCATARSTITGDLF-RVDYQGVYNVTKA 258
             + + +++ A +      D    +D  G     + 
Sbjct: 82  FASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQE 117

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 79.3 bits (196), Expect = 3e-17
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDV-GDPCTLKA 222
           + +VG+T R+G+ +++ L    Y + A  RK +Q  V      V+ V  DV   P  +  
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ--VPQYNN-VKAVHFDVDWTPEEMAK 59

Query: 223 AVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKA 258
            +   + II  + +       L +VD  G   + +A
Sbjct: 60  QLHGMDAIINVSGSGG---KSLLKVDLYGAVKLMQA 92

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 75.2 bits (185), Expect = 9e-16
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL 220
             VL++GA  +I R VI +L  +         R+  + +    P + +I++GDV +   L
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK-IHKPYPTNSQIIMGDVLNHAAL 82

Query: 221 KAAVENCNKIIYCATARST 239
           K A++  + +    T    
Sbjct: 83  KQAMQGQDIVYANLTGEDL 101

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 74.7 bits (184), Expect = 1e-15
 Identities = 13/100 (13%), Positives = 41/100 (41%), Gaps = 3/100 (3%)

Query: 159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPC 218
            +   ++++GA+  +G  ++ + + RG+ V A+VR  ++  + +    +++   DV    
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK--IKIENEHLKVKKADVSSLD 59

Query: 219 TLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKA 258
            +    +  + +I           D++    +    +   
Sbjct: 60  EVCEVCKGADAVISAFNPGWNNP-DIYDETIKVYLTIIDG 98

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 71.9 bits (177), Expect = 5e-14
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 6/99 (6%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRK-ADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
             V+GAT  +G    R +   G+ +  + R  +  + +  L    E  + ++ D   L+ 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLE--PECRVAEMLDHAGLER 73

Query: 223 AVENCNKIIYCATARSTITGD---LFRVDYQGVYNVTKA 258
           A+   + +I+ A    +                     A
Sbjct: 74  ALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAA 112

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA-------DQEVVDMLPRSVEIVL 211
            + + VL+VG T  IG+ ++   +  G+    L R          Q ++       +++ 
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61

Query: 212 GDVGDPCTLKAAVENCNKIIYCATARST 239
             + D   L  A++  + +I        
Sbjct: 62  ASLDDHQRLVDALKQVDVVISALAGGVL 89

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 62.0 bits (150), Expect = 3e-11
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 163 TVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDML--PRSVEIVLGDVGDPCT 219
            + ++GA  +I + +   L+      +    R+    +   +     V ++ G   +P  
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGX 66

Query: 220 LKAAVENCNKIIYCATARS 238
           L+ AV N   +   A    
Sbjct: 67  LEQAVTNAEVVFVGAMESG 85

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 63.0 bits (153), Expect = 3e-11
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 8/87 (9%)

Query: 159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA--------DQEVVDMLPRSVEIV 210
              + +L++GAT  IGR V +  +  G+    LVR++         Q +         IV
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 211 LGDVGDPCTLKAAVENCNKIIYCATAR 237
            G + D  +L  AV+N + +I    + 
Sbjct: 62  HGSIDDHASLVEAVKNVDVVISTVGSL 88

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 62.0 bits (151), Expect = 7e-11
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDMLP-RSVEIVLGDVGDPCTL 220
            V+V G T   G  V R L+  G + V+ + R   ++    L  +  E+V GD  D   +
Sbjct: 7   LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIM 66

Query: 221 KAAVENCNKI 230
           + A+      
Sbjct: 67  ELALNGAYAT 76

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 59.6 bits (144), Expect = 2e-10
 Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           + ++GAT R G  ++ +   RG+ V A+VR A +  +    + + I+  D+ D     + 
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK--ITQTHKDINILQKDIFDLTL--SD 58

Query: 224 VENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQ 260
           + + N ++         + D        + ++     
Sbjct: 59  LSDQNVVVDAYGI----SPDEAEKHVTSLDHLISVLN 91

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 60.2 bits (146), Expect = 4e-10
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRS--VEIVLGDVGDPC-T 219
           T+ VVGAT R G  +IR     G+ V+A V      + + L     V +  G + +    
Sbjct: 7   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL 66

Query: 220 LKAAVENCNKI 230
           +    E  +  
Sbjct: 67  MDTLFEGAHLA 77

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 58.3 bits (141), Expect = 6e-10
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 7/132 (5%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQEVVDMLPRSVEIVLGDVGDP 217
           QN +V ++GA+   GR+++++++ +G    V  + R+      +     V   + D    
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN-VNQEVVDFEKL 75

Query: 218 CTLKAAVENCNKIIYCATARSTITG--DLFRVDYQGVYNVTKAFQDFNNKLAQL--RAGK 273
               +A +  +    C        G     RVD   V    +  +    K   L    G 
Sbjct: 76  DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA 135

Query: 274 SSKSKLLLAKFK 285
              S  L  + K
Sbjct: 136 DKSSNFLYLQVK 147

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 59.1 bits (143), Expect = 6e-10
 Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA---DQEVVDMLPRSVEIVLGDVGDPC 218
           + +L+ G T  IG  +++  +  G+      R        + +       IV G++ +  
Sbjct: 12  SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHE 71

Query: 219 TLKAAVENCNKIIYCATARST 239
            L   ++  + +I        
Sbjct: 72  KLVELMKKVDVVISALAFPQI 92

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
            +++ GAT  +G  +  + +          VR  ++ V D     V +   D  +  ++ 
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK-VPDDWRGKVSVRQLDYFNQESMV 60

Query: 222 AAVE 225
            A +
Sbjct: 61  EAFK 64

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 10/112 (8%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYS-----VKALVRKADQEVVDMLPRSVEIVLGDVGDP 217
             L+VG T  IG  +   L L         V  + R+      +     +  V  D+ DP
Sbjct: 3   VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHE--DNPINYVQCDISDP 60

Query: 218 CTLKAAVENCNKIIYCATARSTITGD---LFRVDYQGVYNVTKAFQDFNNKL 266
              +A +     + +                  + +   NV  A       L
Sbjct: 61  DDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNL 112

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           + V+GAT R G  ++ +   RG+ V A+VR   +           +           +A 
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA---DRLGATVATLVKEPLVLTEAD 59

Query: 224 VENCNKIIYCATARSTITGDLFRVD 248
           +++ + ++   +           +D
Sbjct: 60  LDSVDAVVDALSVPWGSGRGYLHLD 84

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.9 bits (139), Expect = 4e-09
 Identities = 58/453 (12%), Positives = 126/453 (27%), Gaps = 126/453 (27%)

Query: 31  KWTLEMNACK-------------W---HHCRRGQMIVTKASS---SGSGNKEKAGKRSTN 71
           K  + ++ C              W    +C   + ++            N       S+N
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222

Query: 72  TKKSNTNTNPDALTQQQQQQQQQPVSISLDDV-NPVGLGRKSRQIFDEVWRKFSGLGQIS 130
            K    ++    L +  + +  +   + L +V N             + W  F+   +I 
Sbjct: 223 IK-LRIHSIQAELRRLLKSKPYENCLLVLLNVQNA------------KAWNAFNLSCKIL 269

Query: 131 RTTRADDKDSLDALLIREGPMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKA 190
            TTR   K                     Q T  L    T+ I        +        
Sbjct: 270 LTTR--FK---------------------QVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 191 LVRKADQEVVDMLPRSVE----IVLGDVG-----DPCT----LKAAVENCNKIIYCATAR 237
           L++  D    D LPR V       L  +         T         +    II      
Sbjct: 307 LLKYLDCRPQD-LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII-----E 360

Query: 238 STITGDLFRVDYQGVYNVTKAFQDFNNK-----LAQL-RAGKSSKSKLLLAKFKSADSLN 291
           S++   L   +Y+ +++    F   +       L+ +      S   +++ K      + 
Sbjct: 361 SSLN-VLEPAEYRKMFDRLSVFPP-SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418

Query: 292 GWEVRQGTYFQDVVAFKYDAGMD----------------AKFELSETGDAVFSGYVFTRG 335
               ++ T     +  +    ++                  F+  +        Y ++  
Sbjct: 419 KQP-KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 336 GY----VELSKKLSLPLGCTLD--------RYEGLVLSVGGNG----------RSYVLIL 373
           G+    +E  ++++L     LD        R++    +  G+           + Y  I 
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY--IC 535

Query: 374 EAGPSADRSQSKLYFARFSTKVGFCRVRVPFSS 406
           +  P  +R  + +    F  K+    +   ++ 
Sbjct: 536 DNDPKYERLVNAI--LDFLPKIEENLICSKYTD 566

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 28/241 (11%), Positives = 70/241 (29%), Gaps = 77/241 (31%)

Query: 253 YNVT--KAFQDFNNKLAQLR------------AGKSSKSKLLLAKFKSADSLNG---W-- 293
           YNV+  + +      L +LR            +GK+  +  +   +K    ++    W  
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Query: 294 -----------EVRQGTYFQDVVAFKYDAGMDAKFELS---ETGDAVFSGYVFTRGGYVE 339
                      E+ Q   +Q  +   + +  D    +     +  A     + ++  Y  
Sbjct: 189 LKNCNSPETVLEMLQKLLYQ--IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP-YEN 245

Query: 340 -L-------SKKL--SLPLGC-TL--DRYEGLVLSVGGNGRSYVLILEAGPSADRSQSKL 386
            L       + K   +  L C  L   R++ +   +     +++ +     +    + K 
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 387 YFARFSTKVGFCRVRVPFSSFRPVKPDD-PP----MDPFLV-------HTMTIRFEPRRQ 434
              ++   +               +P D P      +P  +             ++  + 
Sbjct: 306 LLLKY---LD-------------CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349

Query: 435 V 435
           V
Sbjct: 350 V 350

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 163 TVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL 220
           ++ V GAT ++G +VI+ L+ +     + A+VR  ++    +  + VE+  GD   P +L
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK-ASTLADQGVEVRHGDYNQPESL 60

Query: 221 KAAVENCNKI 230
           + A    +K+
Sbjct: 61  QKAFAGVSKL 70

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA---------DQEVVDMLPRSVEIVLG 212
             +L++G T  IGR ++   +  G    ALVRK          ++ + +     V ++ G
Sbjct: 3   NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEG 62

Query: 213 DVGDPCTLKAAVENCNKIIYCATA 236
           D+ D  TL  A++  + +I  A  
Sbjct: 63  DINDHETLVKAIKQVDIVICAAGR 86

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 8/86 (9%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA--------DQEVVDMLPRSVEIVLGD 213
             +++ G T  IG+ ++R  +   +      R           Q   +     V I+ G+
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 214 VGDPCTLKAAVENCNKIIYCATARST 239
           + +   + + ++  + +I        
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPFPMI 90

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 164 VLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
           + + GAT ++G  VI  LM       + A+VR   +    +  + + +   D GD   L 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK-AQALAAQGITVRQADYGDEAALT 60

Query: 222 AAVE 225
           +A++
Sbjct: 61  SALQ 64

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA------DQEVVDMLPRSVEIVLG 212
           +    VL+ GAT  IG+ V    +        L R         +    +  +   IV G
Sbjct: 8   SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG 67

Query: 213 DVGDPCTLKAAVENCNKIIYCATARSTITGD 243
            + +   ++  ++     I  +T       D
Sbjct: 68  LINEQEAMEKILKEHEIDIVVSTVGGESILD 98

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
             +LV GA  ++GR++  +L      ++          +D    + E V  D+ D   + 
Sbjct: 4   KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSP----LDPAGPNEECVQCDLADANAVN 59

Query: 222 AAVENCNKIIYCATARSTI--TGDLFRVDYQGVYNVTKA 258
           A V  C+ I++     S       + + +  G+YN+ +A
Sbjct: 60  AMVAGCDGIVHLG-GISVEKPFEQILQGNIIGLYNLYEA 97

>1v0a_A Endoglucanase H; carbohydrate binding module, cellulosome, cellulose degradation, hydrolase, glycosidase; 1.98A {Clostridium thermocellum} SCOP: b.18.1.30 Length = 178

 Score = 49.1 bits (116), Expect = 4e-07
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 8/112 (7%)

Query: 310 DAGMDAKFEL--SETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGL---VLSVGG 364
             G     ++   +TG+ +   Y  T  GY      L         ++  +   + SV G
Sbjct: 24  GEGAKVSTKIVSGKTGNGMEVSYTGTTDGYWGTVYSLP---DGDWSKWLKISFDIKSVDG 80

Query: 365 NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPP 416
           +      ++           + +    +    +  + +PFSSFR      PP
Sbjct: 81  SANEIRFMIAEKSINGVGDGEHWVYSITPDSSWKTIEIPFSSFRRRLDYQPP 132

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 7/96 (7%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
             +LV GA   +G  +   L    + V+      D   +       EIV  D+ D   + 
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLS----DIVDLGAAEAHEEIVACDLADAQAVH 58

Query: 222 AAVENCNKIIYCATARSTIT--GDLFRVDYQGVYNV 255
             V++C+ II+     S      D+ + +  G YN+
Sbjct: 59  DLVKDCDGIIHLG-GVSVERPWNDILQANIIGAYNL 93

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRK--ADQEVVDMLPR------SVEIVLGDV 214
            V V G T  +G  +I+ L+  GYSV   +R     +  V  L         +     D+
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62

Query: 215 GDPCTLKAAVENCNKIIYCAT 235
            +P +  AA+E C  I + A+
Sbjct: 63  SNPDSFAAAIEGCVGIFHTAS 83

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQEVVDML------PRSVEIV 210
           G+Q+ TV V GA+  IG  ++ +L+ RGY+V+A VR   + + V  L         + + 
Sbjct: 2   GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLW 61

Query: 211 LGDVGDPCTLKAAVENCNKIIYCAT 235
             D+ D  +   A++ C  + + AT
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVAT 86

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 11/94 (11%)

Query: 150 PMCEFAIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP--- 204
            +    +P  + + VLV GA   +   V+ +L+  GY V+   R A     +        
Sbjct: 2   KIDNAVLP--EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY 59

Query: 205 ---RSVEIVLGDVGDPCTLKAAVENCNKIIYCAT 235
                  +V  D+         ++    + + A+
Sbjct: 60  PGRFETAVV-EDMLKQGAYDEVIKGAAGVAHIAS 92

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 16/131 (12%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL 220
            VL+ GAT   G  ++ +++       V A  RKA              +   VG    L
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA--------LAEHPRLDNPVGPLAEL 58

Query: 221 KAAVENCNKIIYCA---TARSTITGDLF-RVDYQGVYNVTKAFQDFN-NKLAQLRA-GKS 274
              ++      +C    T +   + + F  VD+     V K   +        + A G  
Sbjct: 59  LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGAD 118

Query: 275 SKSKLLLAKFK 285
           +KS +   + K
Sbjct: 119 AKSSIFYNRVK 129

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTL 220
            ++V GA S +GR +   L+ RG+ V  + R+    Q+   +L  +V  ++ D+     +
Sbjct: 5   HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDV 64

Query: 221 KAAVE 225
             A  
Sbjct: 65  DVAFA 69

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQEVVDMLPRS-----VE 208
                   T  VVG T  +  ++++ L+ +GY+V   VR   +Q+ V  L        ++
Sbjct: 3   TQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLK 62

Query: 209 IVLGDVGDPCTLKAAVENCNKIIYCAT 235
           I   D+ D  + +A +  C+ + + AT
Sbjct: 63  IFRADLTDELSFEAPIAGCDFVFHVAT 89

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Length = 153

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDMLPRSVEIVLGDVGDPCTL 220
            +V G  S +    I +L  RG +V  +    + +   +   L  + +++ GD  D   L
Sbjct: 6   FIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVL 64

Query: 221 KAA-VENCNKII 231
           K A ++ C  I+
Sbjct: 65  KKAGIDRCRAIL 76

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCT 219
           + +++ GA+S +G  + +     G +     R       V + L  +V     D+     
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQE 61

Query: 220 LKAAVE 225
           ++   E
Sbjct: 62  VEQLFE 67

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTL 220
             +V GA S +GR V   L   GY V    R+ D  QE    +      V  DV DP ++
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSV 89

Query: 221 KAAVE 225
           +A   
Sbjct: 90  RALFT 94

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 11/101 (10%)

Query: 163 TVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL 220
            +L+ G      +G  + R+L  +G+ V  L R A       +P  V+ ++ DV  P TL
Sbjct: 5   KILIAGCGD---LGLELARRLTAQGHEVTGLRRSAQP-----MPAGVQTLIADVTRPDTL 56

Query: 221 KAAVE-NCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQ 260
            + V      ++YC  A             +G+ N   A +
Sbjct: 57  ASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALE 97

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 19/127 (14%), Positives = 35/127 (27%), Gaps = 21/127 (16%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
            +L+ GA+ R+G     +L+  G+ V    R     V ++       + GD      + A
Sbjct: 29  PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMA 88

Query: 223 AVENCNK-------------IIYCATARSTITG--DLFRVDYQGVYNVTKAFQDFNNKLA 267
            ++                      T          +F V     Y +            
Sbjct: 89  FIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHC------EP 142

Query: 268 QLRAGKS 274
            L A + 
Sbjct: 143 LLTASEV 149

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVK--ALVRKAD--QEVVDMLPRSVEIVLGDVGDPC 218
            +LV G +  IG+ ++  L           + R     +++ +        V+GD+ +  
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDS 63

Query: 219 TLKAAVE 225
            LK  V 
Sbjct: 64  VLKQLVN 70

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 29/150 (19%)

Query: 161 NTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKAD--QEVVDMLPRSVEIVLGDVGD 216
             +V+V GA   IG  ++++L+       + A  R  +   E+  +    V ++   V  
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 217 PCTLKAAVENCNKI---------IYCA------TARSTITGDLFRVDYQ----GVYNVTK 257
             +L   V    +I         I  A         +     +           V  +T+
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 258 AFQDFNNKLAQLRAGKSSKSKLLLAKFKSA 287
                   L  L+   S +S   L+  ++A
Sbjct: 123 KL------LPLLKNAASKESGDQLSVSRAA 146

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRS---VEIVLGDV 214
           +N TV V+GA   IG  + +K    G++V A  R  +    +V  +  +   +     D 
Sbjct: 6   RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA 65

Query: 215 GDPCTLKAAVE 225
            +   + A + 
Sbjct: 66  RNEDEVTAFLN 76

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 40.6 bits (95), Expect = 6e-04
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 4/78 (5%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRS--VEIVLGDVGDPC 218
             +V+  T  +G      L   G  V    RK D  Q   D + +   V +   +  D  
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA 180

Query: 219 TLKAAVENCNKIIYCATA 236
           +   AV+  + +      
Sbjct: 181 SRAEAVKGAHFVFTAGAI 198

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTL 220
            VL+ GAT  +G    R   L+G+ +    R+A    E+   +      +  D+ D    
Sbjct: 2   RVLITGATGGLGGAFARA--LKGHDLLLSGRRAGALAELAREVG--ARALPADLADELEA 57

Query: 221 KAAVE 225
           KA +E
Sbjct: 58  KALLE 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	437
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.91
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.91
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.91
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.89
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.89
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.88
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.88
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.88
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.88
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.87
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.87
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.87
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.87
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.86
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.86
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.86
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.85
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.84
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.84
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.84
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.84
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.83
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.83
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.83
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.82
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.82
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.82
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.82
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.81
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.81
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.81
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.8
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.8
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.8
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.8
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.8
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.79
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.79
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.79
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.79
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.79
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.79
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.79
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.79
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.79
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.79
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.79
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.78
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.78
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.78
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.78
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.78
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.78
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.78
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.78
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.78
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.78
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.77
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.77
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.77
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.77
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.77
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.77
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.77
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.77
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.77
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.77
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.77
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.77
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.77
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.77
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.77
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.77
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.77
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.77
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.77
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.76
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.76
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.76
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.76
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.76
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.76
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.76
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.76
1spx_A	278	Short-chain reductase family member (5L265); paral	99.76
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.76
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.76
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.76
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.76
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.76
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.76
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.76
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.76
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.76
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.76
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.76
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.76
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.76
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.76
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.76
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.76
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.76
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.76
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.76
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.75
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.75
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.75
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.75
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.75
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.75
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.75
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.75
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.75
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.75
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.75
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.75
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.75
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.75
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.75
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.75
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.75
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.75
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.75
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.75
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.75
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.75
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.75
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.75
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.74
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.74
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.74
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.74
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.74
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.74
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.74
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.74
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.74
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.74
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.74
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.74
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.74
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.74
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.74
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.73
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.73
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.73
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.73
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.73
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.73
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.73
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.73
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.73
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.73
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.73
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.73
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.73
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.73
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.73
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.73
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.73
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.73
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.73
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.73
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.73
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.73
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.72
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.72
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.72
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.72
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.72
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.72
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.72
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.72
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.72
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.72
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.72
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.72
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.72
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.72
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.72
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.72
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.71
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.71
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.71
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.71
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.71
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.71
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.71
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.71
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.71
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.71
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.71
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.71
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.71
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.71
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.7
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.7
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.7
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.7
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.7
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.7
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.7
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.7
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.7
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.7
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.7
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.7
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.69
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.69
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.69
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.69
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.69
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.69
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.69
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.69
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.69
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.69
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.69
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.69
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.69
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.69
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.69
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.68
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.68
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.68
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.68
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.68
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.68
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.68
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.68
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.68
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.68
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.68
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.68
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.67
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.67
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.67
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.67
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.67
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.67
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.66
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.66
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.66
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.66
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.66
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.66
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.66
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.65
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.65
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.65
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.65
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.64
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.64
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.62
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.61
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.6
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.6
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.55
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.52
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.51
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.49
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.47
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.46
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.45
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.43
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.41
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.41
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.39
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.38
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.34
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.34
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.34
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.33
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.31
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.29
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.28
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.2
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.13
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.0
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.99
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.97
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.63
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.59
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.59
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.58
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.55
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.54
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.54
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.43
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.42
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.34
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.33
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.31
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.26
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.22
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.21
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.07
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.05
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.05
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.04
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.97
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.94
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.84
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.83
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.83
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.83
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.79
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.79
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.79
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.76
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.75
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.72
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.72
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.71
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.69
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.64
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.57
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.56
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.55
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.52
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.51
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.47
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.47
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.46
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.46
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.44
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.43
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.41
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.4
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.4
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.38
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.37
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.37
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.36
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.28
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.27
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.25
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.19
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.18
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.17
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.16
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.13
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.09
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.09
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.07
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.06
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.04
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.99
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.95
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.92
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.92
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.91
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.9
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.88
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.86
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.83
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.81
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.77
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.75
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.75
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.73
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.73
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.73
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.72
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.71
1lnq_A	336	MTHK channels, potassium channel related protein;	96.71
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.63
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.63
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.6
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.6
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.58
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.55
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.54
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.54
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.53
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.49
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.47
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.47
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.47
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.46
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.46
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.45
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.41
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.4
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.4
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.39
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.37
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.34
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.29
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.29
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.29
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.28
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.28
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.26
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.23
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.22
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.22
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.2
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.19
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.18
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.18
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.15
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.15
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.15
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.12
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.11
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.1
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.09
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.09
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.09
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.04
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.03
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.03
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.02
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.01
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.99
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.97
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.97
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.94
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.94
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.94
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.91
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	95.9
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.84
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.79
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.78
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.74
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.71
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.68
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.68
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	95.68
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.68
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.64
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	95.63
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.62
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	95.61
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.6
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	95.58
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	95.58
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.55
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.51
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.47
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.45
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.44
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.43
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.43
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	95.39
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.38
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.38
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	95.36
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.32
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.32
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.3
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.3
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	95.29
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.26
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.26
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.23
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.23
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.2
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.14
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.11
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.07

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=4.6e-24  Score=214.04  Aligned_cols=254  Identities=11%  Similarity=0.072  Sum_probs=173.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHH--CCCeEEEEecCCc------------HHHHhhCCCCeEEEEecCCCHHHHHHH-
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLML--RGYSVKALVRKAD------------QEVVDMLPRSVEIVLGDVGDPCTLKAA-  223 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~--~G~~V~~~~R~~~------------~~~~~~~~~~v~~v~~Dltd~~~v~~a-  223 (437)
                      +.+|+||||||+||||++|+++|++  .|++|++++|+..            ..........+.++.+|++|.++++++ 
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   87 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE   87 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence            6789999999999999999999999  9999999999654            111122244679999999999999999 


Q ss_pred             HhcccEEEEeccCCC---CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCc
Q 013761          224 VENCNKIIYCATARS---TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       224 ~~~~D~VIh~Ag~~~---~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ..++|+||||||...   ..+...+++|+.|+.++++++++.++++.++++. .|+...    ..+.+.       .|..
T Consensus        88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~----~~~~E~-------~~~~  156 (362)
T 3sxp_A           88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTK----APNVVG-------KNES  156 (362)
T ss_dssp             TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCC----SSBCTT-------SCCC
T ss_pred             ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCC----CCCCCC-------CCCC
Confidence            788999999999754   3467899999999999999999999987776642 222111    011121       1333


Q ss_pred             ccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee----------------c--cccCC--------CcccHHH
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL----------------S--KKLSL--------PLGCTLD  353 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------------~--~~~~~--------p~g~v~D  353 (437)
                      +.+.|+.+|..++........+  ......++.+.||....                .  ..+..        ...+++|
T Consensus       157 p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  234 (362)
T 3sxp_A          157 PENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIED  234 (362)
T ss_dssp             CSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHH
T ss_pred             CCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHH
Confidence            4577888888888776655444  33333444333332110                0  00000        1227999


Q ss_pred             HHHHHHHHhccCC-cEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcc-cCCCCCCCCCHHHHhhccceeec
Q 013761          354 RYEGLVLSVGGNG-RSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFR-PVKPDDPPMDPFLVHTMTIRFEP  431 (437)
Q Consensus       354 ~~~gi~l~~~~~G-e~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r-~~~~~~~~ld~~ki~~~gi~fep  431 (437)
                      ++++++.++..+. ..|  ++..+.   .+++.|+++.+.+.+|  ..++.+.+.. +.......+|.+|++.. ++|+|
T Consensus       235 va~ai~~~~~~~~~g~~--~i~~~~---~~s~~e~~~~i~~~~g--~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p  306 (362)
T 3sxp_A          235 VIQANVKAMKAQKSGVY--NVGYSQ---ARSYNEIVSILKEHLG--DFKVTYIKNPYAFFQKHTQAHIEPTILD-LDYTP  306 (362)
T ss_dssp             HHHHHHHHTTCSSCEEE--EESCSC---EEEHHHHHHHHHHHHC--CCEEECCC-------CCCCBCCHHHHHH-HCCCC
T ss_pred             HHHHHHHHHhcCCCCEE--EeCCCC---CccHHHHHHHHHHHcC--CCceEECCCCCcCcccceecCHHHHHHH-hCCCC
Confidence            9999999985332 255  445443   5789999999999999  2333322222 44566779999999877 78888


Q ss_pred             cc
Q 013761          432 RR  433 (437)
Q Consensus       432 ~~  433 (437)
                      +.
T Consensus       307 ~~  308 (362)
T 3sxp_A          307 LY  308 (362)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.92  E-value=3e-24  Score=213.90  Aligned_cols=259  Identities=14%  Similarity=0.120  Sum_probs=183.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC----C----CCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML----P----RSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~----~----~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      +++|+||||||+||||++|+++|+++|++|++++|+...  .....+    .    .++.++.+|++|.+++.++++++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            467899999999999999999999999999999997641  111111    1    579999999999999999999999


Q ss_pred             EEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          229 KIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       229 ~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      +|||+||....     .+...+++|+.|+.++++++++.+++ +.++++. .|+....   ..+.+.       .|..+.
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~---~~~~E~-------~~~~p~  172 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPA---LPKVEE-------NIGNPL  172 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC---SSBCTT-------CCCCCC
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCC---CCCccC-------CCCCCC
Confidence            99999997542     24568999999999999999999984 6666542 2221110   112222       223346


Q ss_pred             chhhhhhhhcccchhhhhcccccceeeeeeeccCcccee----------------c--cccC--------CCcccHHHHH
Q 013761          302 QDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL----------------S--KKLS--------LPLGCTLDRY  355 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------------~--~~~~--------~p~g~v~D~~  355 (437)
                      +.|+.+|..++.....+..+.+..+...++...||....                .  ..+.        ....|++|++
T Consensus       173 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  252 (351)
T 3ruf_A          173 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVI  252 (351)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHH
Confidence            778899988888777666666666666666555552110                0  0010        1123899999


Q ss_pred             HHHHHHhcc----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce----ecccCCCcccCCCCCCCCCHHHHhhccc
Q 013761          356 EGLVLSVGG----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR----VRVPFSSFRPVKPDDPPMDPFLVHTMTI  427 (437)
Q Consensus       356 ~gi~l~~~~----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~----v~iP~~~~r~~~~~~~~ld~~ki~~~gi  427 (437)
                      ++++.++..    .|+.|++  +++.   .+++.|+++.+.+.+|...    ..+.+..+++.......+|.+|+++. +
T Consensus       253 ~a~~~~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-l  326 (351)
T 3ruf_A          253 QMNILSALAKDSAKDNIYNV--AVGD---RTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDL-L  326 (351)
T ss_dssp             HHHHHHHTCCGGGCSEEEEE--SCSC---CEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHH-H
T ss_pred             HHHHHHHhhccccCCCEEEe--CCCC---cccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHH-h
Confidence            999988754    5677766  4332   5789999999999988522    12223344555566789999999997 7


Q ss_pred             eeeccc
Q 013761          428 RFEPRR  433 (437)
Q Consensus       428 ~fep~~  433 (437)
                      +|+|+.
T Consensus       327 G~~p~~  332 (351)
T 3ruf_A          327 KYRPNI  332 (351)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            888874

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.92  E-value=5.6e-24  Score=211.48  Aligned_cols=260  Identities=12%  Similarity=0.093  Sum_probs=181.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~  229 (437)
                      +.+|+|||||||||||++|+++|+++|  ++|++++|....   ..+..+  ..++.++.+|++|.+++.+++++  +|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            567899999999999999999999999  788888886531   112222  24799999999999999999998  999


Q ss_pred             EEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          230 IIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       230 VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      |||+||....     .+...+++|+.|+.++++++++.+++ +.++++. .|+...  ....+.+.       .|..+..
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~--~~~~~~E~-------~~~~p~~  172 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLG--KTGRFTEE-------TPLAPNS  172 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCC--SSCCBCTT-------SCCCCCS
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCC--cCCCcCCC-------CCCCCCC
Confidence            9999997542     25678999999999999999999987 6666542 222110  00112222       2333567


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------e----c--cccC--------CCcccHHHHHHHHHH
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L----S--KKLS--------LPLGCTLDRYEGLVL  360 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i----~--~~~~--------~p~g~v~D~~~gi~l  360 (437)
                      .|+.+|..++........+.+..+...++...||...        +    .  ..+.        ....|++|++++++.
T Consensus       173 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  252 (346)
T 4egb_A          173 PYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDV  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHH
Confidence            7999999888887766666666666666655555211        0    0  0011        011379999999999


Q ss_pred             Hhc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          361 SVG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       361 ~~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++.  ..|+.|++.  .+.   .+++.|+++.+.+.+|.+...+++...++.......+|.+|+++. ++|+|+.
T Consensus       253 ~~~~~~~g~~~~i~--~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  321 (346)
T 4egb_A          253 VLHKGRVGEVYNIG--GNN---EKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNE-FDWEPKY  321 (346)
T ss_dssp             HHHHCCTTCEEEEC--CSC---CEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHH-HCCCCCC
T ss_pred             HHhcCCCCCEEEEC--CCC---ceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHH-cCCCCCC
Confidence            883  467788773  332   478999999999999964433555555666667778999999987 8888873

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=1.2e-23  Score=208.46  Aligned_cols=257  Identities=15%  Similarity=0.098  Sum_probs=178.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHh--cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVE--NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~--~~D~VI  231 (437)
                      ++|+||||||+||||++|+++|+++|++|++++|+.+.  .....    ....+.++.+|++|.++++++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            46799999999999999999999999999999997652  11111    24578999999999999999998  789999


Q ss_pred             EeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          232 YCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       232 h~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      ||||.....     +.+.+++|+.++.++++++++.+++ +.++++. .|+...   ...+.+.       .|..+...|
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~---~~~~~e~-------~~~~~~~~Y  153 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPE---RSPIDET-------FPLSATNPY  153 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCS---SSSBCTT-------SCCBCSSHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCC---CCCCCCC-------CCCCCCChh
Confidence            999986432     4568999999999999999999874 6666542 222110   0011121       223345778


Q ss_pred             hhhhhhcccchhhhhcccc-cceeeeeeeccCccce----------------------ec---cccC-------------
Q 013761          305 VAFKYDAGMDAKFELSETG-DAVFSGYVFTRGGYVE----------------------LS---KKLS-------------  345 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~-~~v~~g~~~~~~G~~~----------------------i~---~~~~-------------  345 (437)
                      +.+|..++........+++ ..+...++++.||...                      ..   ..+.             
T Consensus       154 ~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  233 (341)
T 3enk_A          154 GQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTG  233 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSC
T ss_pred             HHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCe
Confidence            8888888877765555544 5555555555444210                      00   0000             


Q ss_pred             -CCcccHHHHHHHHHHHhc-----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCH
Q 013761          346 -LPLGCTLDRYEGLVLSVG-----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDP  419 (437)
Q Consensus       346 -~p~g~v~D~~~gi~l~~~-----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~  419 (437)
                       ....|++|++++++.++.     ..|+.|++  +++.   .+++.|+++.+.+.+|.+ +++.+...++.......+|.
T Consensus       234 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~  307 (341)
T 3enk_A          234 VRDYIHVVDLARGHIAALDALERRDASLTVNL--GTGR---GYSVLEVVRAFEKASGRA-VPYELVARRPGDVAECYANP  307 (341)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHHTSCEEEEE--SCSC---CEEHHHHHHHHHHHHCSC-CCEEEECCCTTCCSEECBCC
T ss_pred             eEeeEEHHHHHHHHHHHHHhhhcCCcceEEEe--CCCC---ceeHHHHHHHHHHHhCCC-cceeeCCCCCCCccccccCH
Confidence             012389999999998874     35777766  4332   578999999999999952 22222233555556678999


Q ss_pred             HHHhhccceeeccc
Q 013761          420 FLVHTMTIRFEPRR  433 (437)
Q Consensus       420 ~ki~~~gi~fep~~  433 (437)
                      +|+++. ++|+|+.
T Consensus       308 ~k~~~~-lG~~p~~  320 (341)
T 3enk_A          308 AAAAET-IGWKAER  320 (341)
T ss_dssp             HHHHHH-HCCCCCC
T ss_pred             HHHHHH-cCCCCCC
Confidence            999987 8898864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.91  E-value=6.6e-24  Score=211.08  Aligned_cols=251  Identities=16%  Similarity=0.140  Sum_probs=171.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+|+||||||+||||++|+++|+++|++|++++|+.+.       ..+.++.+|++|.+++.++++++|+|||+|+..
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~   88 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM   88 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence            4678899999999999999999999999999999998653       467889999999999999999999999999976


Q ss_pred             CCc---hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          238 STI---TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       238 ~~~---~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                      ...   +...+++|+.|+.++++++++.+++ +.++++. .|+.... ....+.+.       .|..+...|+.+|..++
T Consensus        89 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~-~~~~~~E~-------~~~~~~~~Y~~sK~~~E  160 (347)
T 4id9_A           89 SWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRP-EFLPVTED-------HPLCPNSPYGLTKLLGE  160 (347)
T ss_dssp             CSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSC-SSSSBCTT-------SCCCCCSHHHHHHHHHH
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCC-CCCCcCCC-------CCCCCCChHHHHHHHHH
Confidence            543   4679999999999999999999984 6666542 2221000 00011111       22234566777777777


Q ss_pred             cchhhhhcccccceeeeeeeccC-------------ccc--------------e---------ec--ccc--------CC
Q 013761          313 MDAKFELSETGDAVFSGYVFTRG-------------GYV--------------E---------LS--KKL--------SL  346 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~-------------G~~--------------~---------i~--~~~--------~~  346 (437)
                      .....+..+.+..+...++...|             |..              .         ..  ..+        ..
T Consensus       161 ~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  240 (347)
T 4id9_A          161 ELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGR  240 (347)
T ss_dssp             HHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCC
T ss_pred             HHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCccc
Confidence            76665555555555555554444             211              0         00  000        01


Q ss_pred             Cc----ccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCH
Q 013761          347 PL----GCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDP  419 (437)
Q Consensus       347 p~----g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~  419 (437)
                      +.    .|++|++++++.++..   .|+.|++  +.+.   .+++.|+++.+.+.+|.+...++    .|..+....+|.
T Consensus       241 ~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~----~p~~~~~~~~d~  311 (347)
T 4id9_A          241 PFRMHITDTRDMVAGILLALDHPEAAGGTFNL--GADE---PADFAALLPKIAALTGLPIVTVD----FPGDGVYYHTSN  311 (347)
T ss_dssp             BCEECEEEHHHHHHHHHHHHHCGGGTTEEEEE--SCSS---CEEHHHHHHHHHHHHCCCEEEEE----CSSCCCBCCBCC
T ss_pred             CCccCcEeHHHHHHHHHHHhcCcccCCCeEEE--CCCC---cccHHHHHHHHHHHhCCCCceee----CCCcccccccCH
Confidence            12    5799999999999843   3777866  3332   47899999999999995322111    122233678999


Q ss_pred             HHHhhccceeeccc
Q 013761          420 FLVHTMTIRFEPRR  433 (437)
Q Consensus       420 ~ki~~~gi~fep~~  433 (437)
                      +|+++. ++|+|+.
T Consensus       312 ~k~~~~-lG~~p~~  324 (347)
T 4id9_A          312 ERIRNT-LGFEAEW  324 (347)
T ss_dssp             HHHHHH-HCCCCCC
T ss_pred             HHHHHH-hCCCCCC
Confidence            999987 7888863

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.91  E-value=3.7e-23  Score=203.05  Aligned_cols=250  Identities=12%  Similarity=0.051  Sum_probs=179.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC-
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST-  239 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~-  239 (437)
                      +|+||||||+||||++|+++|+++|++|++++|+....  . + .++.++.+|++ .+++.++++++|+|||+||.... 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-~-~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~   76 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK--A-I-NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ   76 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc--c-C-CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence            57999999999999999999999999999999984321  1 2 27899999999 99999999999999999998654 


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhh
Q 013761          240 ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       240 ~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~  317 (437)
                      .+...+++|+.++.++++++++.+++ +.++++. .|+....   ..+.+.       .|..+.+.|+.+|..++.....
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~---~~~~E~-------~~~~p~~~Y~~sK~~~E~~~~~  146 (311)
T 3m2p_A           77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETS---LPWNEK-------ELPLPDLMYGVSKLACEHIGNI  146 (311)
T ss_dssp             SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGG---CSBCTT-------SCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCC---CCCCCC-------CCCCCCchhHHHHHHHHHHHHH
Confidence            46778999999999999999999987 6666642 2332110   122222       1333467889999988887776


Q ss_pred             hhcccccceeeeeeeccCcccee--------------ccccCC--------CcccHHHHHHHHHHHhcc--CCcEEEEEc
Q 013761          318 ELSETGDAVFSGYVFTRGGYVEL--------------SKKLSL--------PLGCTLDRYEGLVLSVGG--NGRSYVLIL  373 (437)
Q Consensus       318 ~~~~~~~~v~~g~~~~~~G~~~i--------------~~~~~~--------p~g~v~D~~~gi~l~~~~--~Ge~y~l~l  373 (437)
                      ...+.+..+...++...||....              ...+.+        ...+++|++++++.++..  .++.|++  
T Consensus       147 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i--  224 (311)
T 3m2p_A          147 YSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNI--  224 (311)
T ss_dssp             HHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEE--
T ss_pred             HHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEe--
Confidence            66666666666666555542110              001111        123899999999999853  4677766  


Q ss_pred             cCCCCCCCCcHHHHHHHHHhhhCCceecccCCCc-ccCCCCCCCCCHHHHhhccceeecc
Q 013761          374 EAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSF-RPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       374 ~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~-r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      .++.   .+++.|+++.+.+.+|... .+.+... ++.......+|.+|+++. ++|+|+
T Consensus       225 ~~~~---~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~  279 (311)
T 3m2p_A          225 GSGD---ALTNYEVANTINNAFGNKD-NLLVKNPNANEGIHSSYMDSSKAKEL-LDFSTD  279 (311)
T ss_dssp             CCSC---EECHHHHHHHHHHHTTCTT-CEEECSSSBCCSCCCBCBCCHHHHHH-SCCCCS
T ss_pred             CCCC---cccHHHHHHHHHHHhCCCC-cceecCCCCCCCcCceecCHHHHHHH-hCCCcc
Confidence            4332   4789999999999999532 2222222 455567789999999997 788887

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.91  E-value=4.4e-23  Score=204.98  Aligned_cols=260  Identities=14%  Similarity=0.122  Sum_probs=179.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCc---HHHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKAD---QEVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~---~~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +|+||||||+||||++|+++|+++  |++|++++|+..   .+....+ ..++.++.+|++|.+++.++++++|+|||||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            479999999999999999999998  899999999653   1122222 3578999999999999999999999999999


Q ss_pred             cCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-Ccchhhhh---------hhhhccCCCCcceeeccCc
Q 013761          235 TARST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLL---------LAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       235 g~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~---------~~k~v~~ssl~~~i~rP~~  299 (437)
                      |....     .+...+++|+.|+.++++++.+.++++.++++. .|+.....         ....+.+.       .|..
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-------~~~~  156 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-------TNYN  156 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-------SCCC
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCC-------CCCC
Confidence            97642     356789999999999999999988887777643 22211000         00011111       1333


Q ss_pred             ccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee------------c--cccC--------CCcccHHHHHHH
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL------------S--KKLS--------LPLGCTLDRYEG  357 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i------------~--~~~~--------~p~g~v~D~~~g  357 (437)
                      +...|+.+|..++........+++..+...++...||....            .  ..+.        ....+++|++++
T Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  236 (348)
T 1oc2_A          157 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG  236 (348)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHH
Confidence            45789999999888776665555665555555544442110            0  0010        112389999999


Q ss_pred             HHHHhc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          358 LVLSVG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       358 i~l~~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++.++.  ..|+.|++.  .+.   .+++.|+++.+.+.+|.....+++...++.......+|.+|+++. ++|+|+.
T Consensus       237 ~~~~~~~~~~g~~~~i~--~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  308 (348)
T 1oc2_A          237 VWAILTKGRMGETYLIG--ADG---EKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDE-LGWTPQF  308 (348)
T ss_dssp             HHHHHHHCCTTCEEEEC--CSC---EEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHH-HCCCCSC
T ss_pred             HHHHhhCCCCCCeEEeC--CCC---CCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHH-cCCCCCC
Confidence            998884  357788773  322   468999999999999853222333333444444567899999987 7788763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=7.6e-23  Score=202.25  Aligned_cols=258  Identities=14%  Similarity=0.096  Sum_probs=176.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      ++|+||||||+||||++|+++|+++|  ++|++++|...   .+.+..+  ..++.++.+|++|.+++++++.++|+|||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            45789999999999999999999986  89999999642   1222222  34789999999999999999999999999


Q ss_pred             eccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCC--ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          233 CATARST-----ITGDLFRVDYQGVYNVTKAFQDFNN--KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       233 ~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gv--kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      |||....     .+..++++|+.|+.++++++.+.++  ++.++++. .|+...   ...+.+.       .|..+...|
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~---~~~~~E~-------~~~~~~~~Y  151 (336)
T 2hun_A           82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL---KGSFTEN-------DRLMPSSPY  151 (336)
T ss_dssp             CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS---SSCBCTT-------BCCCCCSHH
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC---CCCcCCC-------CCCCCCCcc
Confidence            9997642     3567899999999999999998874  56666542 122110   0111221       122345678


Q ss_pred             hhhhhhcccchhhhhcccccceeeeeeeccCcccee------------c--cccC--------CCcccHHHHHHHHHHHh
Q 013761          305 VAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL------------S--KKLS--------LPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i------------~--~~~~--------~p~g~v~D~~~gi~l~~  362 (437)
                      +.+|..++........+++..+...++...||....            .  ..+.        ....+++|++++++.++
T Consensus       152 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  231 (336)
T 2hun_A          152 SATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVL  231 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHH
Confidence            999988888776655555655555555444432110            0  0010        11238999999999887


Q ss_pred             c--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          363 G--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       363 ~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      .  ..|+.|++.  .+.   .+++.|+++.+.+.+|.....+++...++.......+|.+|+++. ++|+|+.
T Consensus       232 ~~~~~g~~~~v~--~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  298 (336)
T 2hun_A          232 LKGESREIYNIS--AGE---EKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRD-LKWRPKY  298 (336)
T ss_dssp             HHCCTTCEEEEC--CSC---EECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHH-HCCCCSS
T ss_pred             hCCCCCCEEEeC--CCC---cccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHH-hCCCCCC
Confidence            4  357788773  322   468999999999999853222333333444444567899999987 7888863

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=1.4e-22  Score=200.23  Aligned_cols=259  Identities=19%  Similarity=0.192  Sum_probs=179.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~VI  231 (437)
                      ..+|+||||||+||||++|+++|+++|++|++++|+.+.   .....+  ...+.++.+|++|.+++.+++++  +|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            457899999999999999999999999999999997652   122222  34688999999999999999987  59999


Q ss_pred             EeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCC--ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          232 YCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNN--KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       232 h~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gv--kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      |+||....     .+...+++|+.|+.++++++.+.++  ++.++++. .|+...   ...+.+.       .|..+...
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~---~~~~~E~-------~~~~p~~~  161 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ---AERQDEN-------TPFYPRSP  161 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS---SSSBCTT-------SCCCCCSH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCC---CCCCCcc-------cCCCCCCh
Confidence            99997542     3567899999999999999999885  46666542 222110   0112222       12234577


Q ss_pred             hhhhhhhcccchhhhhcccccceeeeeeeccCccce--------e---------ccccC---------CCcccHHHHHHH
Q 013761          304 VVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L---------SKKLS---------LPLGCTLDRYEG  357 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i---------~~~~~---------~p~g~v~D~~~g  357 (437)
                      |+.+|..++........+++......++++.||...        +         .....         ....|++|++++
T Consensus       162 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a  241 (335)
T 1rpn_A          162 YGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA  241 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHH
Confidence            999999988887666666666666667666555210        0         00010         012389999999


Q ss_pred             HHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ecccC--CCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          358 LVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR-VRVPF--SSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       358 i~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~iP~--~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++.++. ..++.|++  .++.   .+++.|+++.+.+.+|.+. ..+++  ..+++.......+|.+|+++. ++|+|+.
T Consensus       242 ~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  315 (335)
T 1rpn_A          242 MWLMLQQDKADDYVV--ATGV---TTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRV-LGWKPRT  315 (335)
T ss_dssp             HHHHHHSSSCCCEEE--CCSC---EEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHH-HCCCCCS
T ss_pred             HHHHHhcCCCCEEEE--eCCC---CccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHh-cCCCcCC
Confidence            999884 34566766  4332   4789999999999998531 11222  223555555667899999987 7888863

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=1.4e-22  Score=202.24  Aligned_cols=259  Identities=15%  Similarity=0.135  Sum_probs=177.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH----hhC----CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV----DML----PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~----~~~----~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      +.+|+||||||+||||++|+++|+++|++|++++|+...  ...    +.+    ...+.++.+|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            456899999999999999999999999999999997541  111    111    2578999999999999999999999


Q ss_pred             EEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          229 KIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       229 ~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      +|||+||....     .+...+++|+.|+.++++++.+.+++ +.++++. .|+...   ...+.+.       .|..+.
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~---~~~~~E~-------~~~~~~  174 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHP---GLPKVED-------TIGKPL  174 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC---CSSBCTT-------CCCCCC
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCC---CCCCCCC-------CCCCCC
Confidence            99999997642     35678999999999999999999875 6666542 222110   0111121       122345


Q ss_pred             chhhhhhhhcccchhhhhcccccceeeeeeeccCccce------------e----c--cccC--------CCcccHHHHH
Q 013761          302 QDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE------------L----S--KKLS--------LPLGCTLDRY  355 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i----~--~~~~--------~p~g~v~D~~  355 (437)
                      ..|+.+|..++........+.+..+...++...||...            .    .  ..+.        ....+++|++
T Consensus       175 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  254 (352)
T 1sb8_A          175 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV  254 (352)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence            67888888887776555555555555555444333110            0    0  0010        1123899999


Q ss_pred             HHHHHHhcc----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhh---CCceec-ccCCCcccCCCCCCCCCHHHHhhccc
Q 013761          356 EGLVLSVGG----NGRSYVLILEAGPSADRSQSKLYFARFSTKV---GFCRVR-VPFSSFRPVKPDDPPMDPFLVHTMTI  427 (437)
Q Consensus       356 ~gi~l~~~~----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~---G~~~v~-iP~~~~r~~~~~~~~ld~~ki~~~gi  427 (437)
                      ++++.++..    .|+.|++  ..+.   .+++.|+++.+.+.+   |..... ..+..+++.......+|.+|+++. +
T Consensus       255 ~a~~~~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-l  328 (352)
T 1sb8_A          255 QANLLAATAGLDARNQVYNI--AVGG---RTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKL-L  328 (352)
T ss_dssp             HHHHHHHTCCGGGCSEEEEE--SCSC---CEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHH-T
T ss_pred             HHHHHHHhccccCCCceEEe--CCCC---CccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHH-h
Confidence            999887743    4677766  3332   478999999999999   853211 113334444555678899999987 7


Q ss_pred             eeeccc
Q 013761          428 RFEPRR  433 (437)
Q Consensus       428 ~fep~~  433 (437)
                      +|+|+.
T Consensus       329 G~~p~~  334 (352)
T 1sb8_A          329 GYAPKY  334 (352)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            888864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.90  E-value=3.5e-24  Score=215.26  Aligned_cols=265  Identities=11%  Similarity=0.030  Sum_probs=178.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcHHHHhhCCCCeEEEEecCC-CHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDMLPRSVEIVLGDVG-DPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dlt-d~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      |++|+||||||+||||++|+++|+++ |++|++++|+.+.........++.++.+|++ |.+.+.++++++|+|||+||.
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~  101 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI  101 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence            67889999999999999999999998 9999999998653111111358999999999 999999999999999999998


Q ss_pred             CCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccC-cccchhhhhhh
Q 013761          237 RST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQG-TYFQDVVAFKY  309 (437)
Q Consensus       237 ~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~-~~~~~y~~sk~  309 (437)
                      ...     .+.+.+++|+.|+.++++++++.+.++.++++. .|+...   ...+.+..... ...|. .+.+.|+.+|.
T Consensus       102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~---~~~~~e~~~~~-~~~p~~~p~~~Y~~sK~  177 (372)
T 3slg_A          102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCA---DEQFDPDASAL-TYGPINKPRWIYACSKQ  177 (372)
T ss_dssp             CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCC---CSSBCTTTCCE-EECCTTCTTHHHHHHHH
T ss_pred             ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCC---CCCCCcccccc-ccCCCCCCCCcHHHHHH
Confidence            653     245688999999999999999988557666642 222110   01122222111 11121 24557899999


Q ss_pred             hcccchhhhhcccccceeeeeeeccCcccee----------------c------cccCC--------CcccHHHHHHHHH
Q 013761          310 DAGMDAKFELSETGDAVFSGYVFTRGGYVEL----------------S------KKLSL--------PLGCTLDRYEGLV  359 (437)
Q Consensus       310 a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------------~------~~~~~--------p~g~v~D~~~gi~  359 (437)
                      .++.....+..+ +..+...++...||....                .      ..+.+        ...|++|++++++
T Consensus       178 ~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          178 LMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            888887666555 666666666555542210                0      01111        1238999999999


Q ss_pred             HHhc-----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCC---------c---ccCCCCCCCCCHH
Q 013761          360 LSVG-----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSS---------F---RPVKPDDPPMDPF  420 (437)
Q Consensus       360 l~~~-----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~---------~---r~~~~~~~~ld~~  420 (437)
                      .++.     ..|+.|++  +++  .+.+++.|+++.+.+.+|...  ...|...         +   .+.......+|.+
T Consensus       257 ~~~~~~~~~~~~~~~ni--~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  332 (372)
T 3slg_A          257 KIIENSNGVATGKIYNI--GNP--NNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIE  332 (372)
T ss_dssp             HHHHCGGGTTTTEEEEE--CCT--TCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBCCH
T ss_pred             HHHhcccCcCCCceEEe--CCC--CCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecCHH
Confidence            9884     25778877  331  125789999999999988321  1111100         0   0123456688999


Q ss_pred             HHhhccceeeccc
Q 013761          421 LVHTMTIRFEPRR  433 (437)
Q Consensus       421 ki~~~gi~fep~~  433 (437)
                      |++.. ++|+|+.
T Consensus       333 k~~~~-lG~~p~~  344 (372)
T 3slg_A          333 NTMQE-LGWAPQF  344 (372)
T ss_dssp             HHHHH-HTCCCCC
T ss_pred             HHHHH-cCCCCCC
Confidence            99987 8888874

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=6.9e-23  Score=200.86  Aligned_cols=254  Identities=17%  Similarity=0.102  Sum_probs=173.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~~~  239 (437)
                      |+||||||+||||++|+++|+++|++|++++|..... ...+...+.++.+|++|.++++++++  ++|+|||+||....
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   79 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGK-RENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCC-GGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCc-hhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence            4799999999999999999999999999999854321 12233467889999999999999998  78999999997542


Q ss_pred             -----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          240 -----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       240 -----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                           .+...+++|+.|+.++++++++.+++ +.++++.  .|+...  ....+.+.       .|..+...|+.+|...
T Consensus        80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~--~~~~~~E~-------~~~~~~~~Y~~sK~~~  150 (311)
T 2p5y_A           80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVP--EGERAEET-------WPPRPKSPYAASKAAF  150 (311)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCC--TTCCBCTT-------SCCCCCSHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCC--CCCCcCCC-------CCCCCCChHHHHHHHH
Confidence                 25678999999999999999998874 5555532  111000  00011111       1223456788888888


Q ss_pred             ccchhhhhcccccceeeeeeeccCccce-----------e------ccccC-------------CCcccHHHHHHHHHHH
Q 013761          312 GMDAKFELSETGDAVFSGYVFTRGGYVE-----------L------SKKLS-------------LPLGCTLDRYEGLVLS  361 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~~~~~G~~~-----------i------~~~~~-------------~p~g~v~D~~~gi~l~  361 (437)
                      +........+++..+...++.+.||...           .      ...+.             ....|++|++++++.+
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  230 (311)
T 2p5y_A          151 EHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA  230 (311)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHH
Confidence            8777655555566555555554444210           0      00000             0123899999999998


Q ss_pred             hccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          362 VGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       362 ~~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +..+|+.|++  +.+.   .++++|+++.+.+.+|.. +++.+...++.+.....+|.+|+++  ++|+|+.
T Consensus       231 ~~~~~~~~~i--~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~--lg~~p~~  294 (311)
T 2p5y_A          231 LFSLEGIYNV--GTGE---GHTTREVLMAVAEAAGKA-PEVQPAPPRPGDLERSVLSPLKLMA--HGWRPKV  294 (311)
T ss_dssp             HHHCCEEEEE--SCSC---CEEHHHHHHHHHHHHTCC-CCEEEECCCTTCCSBCCBCCHHHHT--TTCCCSS
T ss_pred             HhCCCCEEEe--CCCC---CccHHHHHHHHHHHhCCC-CCceeCCCCccchhhccCCHHHHHH--CCCCCCC
Confidence            8655777766  3332   478999999999999852 2222222334444567899999998  7788864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.90  E-value=1.3e-22  Score=205.02  Aligned_cols=261  Identities=13%  Similarity=0.073  Sum_probs=176.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+|+||||||+||||++|+++|+++| ++|++++|+..... ..+  ...+.++.+|++|.++++++++++|+|||+||
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~  108 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK-INVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT  108 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG-GGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch-hhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence            667899999999999999999999999 99999999765311 112  35789999999999999999999999999999


Q ss_pred             CCCC-----chhhHHHHHHHHHHHHHHHHHhc-CC-ceeeeecC-Ccchhhhhhhhhcc--CCCCcceeeccC-cccchh
Q 013761          236 ARST-----ITGDLFRVDYQGVYNVTKAFQDF-NN-KLAQLRAG-KSSKSKLLLAKFKS--ADSLNGWEVRQG-TYFQDV  304 (437)
Q Consensus       236 ~~~~-----~~~~~~~vNv~gt~~l~~aa~~~-gv-kl~~l~~~-~~g~sk~~~~k~v~--~ssl~~~i~rP~-~~~~~y  304 (437)
                      ....     .+...+++|+.++.++++++++. ++ ++.++++. .|+....   ..+.  +....    .|. .+...|
T Consensus       109 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~---~~~~~~E~~~~----~~~~~~~~~Y  181 (377)
T 2q1s_A          109 YHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTF---DDAKATEETDI----VSLHNNDSPY  181 (377)
T ss_dssp             CSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-----------------CCCCC----CCSSCCCSHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCC---CCcCccccccc----ccccCCCCch
Confidence            7643     35678999999999999999998 77 46666542 2321110   0122  22100    022 345779


Q ss_pred             hhhhhhcccchhhhhcccccceeeeeeeccCccce---------------------ec------cccCC--------Ccc
Q 013761          305 VAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE---------------------LS------KKLSL--------PLG  349 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~---------------------i~------~~~~~--------p~g  349 (437)
                      +.+|..++........+.+..+...++...||...                     ..      ..+..        ...
T Consensus       182 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i  261 (377)
T 2q1s_A          182 SMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFI  261 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeE
Confidence            99999888877665555565555555544443211                     00      01111        112


Q ss_pred             cHHHHHHH-HHHHhccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCC-CCCCCHHHHhhccc
Q 013761          350 CTLDRYEG-LVLSVGGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPD-DPPMDPFLVHTMTI  427 (437)
Q Consensus       350 ~v~D~~~g-i~l~~~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~-~~~ld~~ki~~~gi  427 (437)
                      +++|++++ ++.++..+... .+++..+.   .+++.|+++.+.+.+|.+ .++.+.+.++.... ...+|.+|+++. +
T Consensus       262 ~v~Dva~a~i~~~~~~~~~g-~~~i~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~~~d~~k~~~~-l  335 (377)
T 2q1s_A          262 FVEDVANGLIACAADGTPGG-VYNIASGK---ETSIADLATKINEITGNN-TELDRLPKRPWDNSGKRFGSPEKARRE-L  335 (377)
T ss_dssp             EHHHHHHHHHHHHHHCCTTE-EEECCCCC---CEEHHHHHHHHHHHHTCC-SCCCCCCCCGGGCC-CCCCCCHHHHHH-H
T ss_pred             EHHHHHHHHHHHHHhcCCCC-eEEecCCC---ceeHHHHHHHHHHHhCCC-CCceeCCCCccccccccccCHHHHHHH-c
Confidence            79999999 88877432122 44555543   578999999999999853 22222223444445 678999999877 7


Q ss_pred             eeeccc
Q 013761          428 RFEPRR  433 (437)
Q Consensus       428 ~fep~~  433 (437)
                      +|+|+.
T Consensus       336 G~~p~~  341 (377)
T 2q1s_A          336 GFSADV  341 (377)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            888863

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=3e-22  Score=197.98  Aligned_cols=259  Identities=16%  Similarity=0.132  Sum_probs=176.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC--CCCeEEEEecCCCHHHHHHHHhcc--cEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML--PRSVEIVLGDVGDPCTLKAAVENC--NKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~--D~VI  231 (437)
                      |++|+||||||+||||++|+++|+++|++|++++|+.+.   ..+..+  ..++.++.+|++|.+++.++++++  |+||
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            356899999999999999999999999999999998652   122222  236889999999999999999874  9999


Q ss_pred             EeccCCC-----CchhhHHHHHHHHHHHHHHHHHhcCC--ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          232 YCATARS-----TITGDLFRVDYQGVYNVTKAFQDFNN--KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       232 h~Ag~~~-----~~~~~~~~vNv~gt~~l~~aa~~~gv--kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      ||||...     ..+...+++|+.|+.++++++.+.++  ++.++++. .|+....   ..+.+.       .|..+...
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~---~~~~e~-------~~~~~~~~  150 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQE---IPQTEK-------TPFYPRSP  150 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSS---SSBCTT-------SCCCCCSH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC---CCCCcc-------CCCCCCCh
Confidence            9999754     23667899999999999999998885  46666542 2221110   011111       23334678


Q ss_pred             hhhhhhhcccchhhhhcccccceeeeeeeccCcccee----------------cc-ccC---------CCcccHHHHHHH
Q 013761          304 VVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL----------------SK-KLS---------LPLGCTLDRYEG  357 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------------~~-~~~---------~p~g~v~D~~~g  357 (437)
                      |+.+|...+........+++......+.++.+|....                .. ...         ....+++|++++
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a  230 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEA  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHH
Confidence            9999999988776666666655555565554442110                00 000         113489999999


Q ss_pred             HHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ec---ccCC----------------CcccCCCCCCC
Q 013761          358 LVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR-VR---VPFS----------------SFRPVKPDDPP  416 (437)
Q Consensus       358 i~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~---iP~~----------------~~r~~~~~~~~  416 (437)
                      ++.++. ..++.|++  .++.   .+++.|+++.+.+.+|.+. +.   +|..                .+++.......
T Consensus       231 ~~~~~~~~~~~~~~i--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (345)
T 2z1m_A          231 MWLMMQQPEPDDYVI--ATGE---THTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILV  305 (345)
T ss_dssp             HHHHHTSSSCCCEEE--CCSC---CEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCC
T ss_pred             HHHHHhCCCCceEEE--eCCC---CccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceee
Confidence            999885 34566765  4332   5789999999999998532 11   2221                12333344557


Q ss_pred             CCHHHHhhccceeeccc
Q 013761          417 MDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       417 ld~~ki~~~gi~fep~~  433 (437)
                      +|.+|+++. ++|+|+.
T Consensus       306 ~d~~k~~~~-lG~~p~~  321 (345)
T 2z1m_A          306 GNPEKAMKK-LGWKPRT  321 (345)
T ss_dssp             BCCHHHHHH-HCCCCCS
T ss_pred             cCHHHHHHH-cCCcccC
Confidence            799999887 7888863

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=6.3e-23  Score=200.80  Aligned_cols=253  Identities=12%  Similarity=0.045  Sum_probs=173.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC--
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST--  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~--  239 (437)
                      |+||||||+||||++|+++|+++|++|++++|+.+.. .......+.++.+|++|.+ +.+++++ |+|||+||....  
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR-REFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC-GGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc-hhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            5899999999999999999999999999999976531 1223557899999999998 8888888 999999996432  


Q ss_pred             ---chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          240 ---ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       240 ---~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                         .+...+++|+.|+.++++++++.+++ +.++++. .|+....   ..+.+.       .|..+...|+.+|..++..
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~---~~~~e~-------~~~~p~~~Y~~sK~~~e~~  147 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADV---IPTPEE-------EPYKPISVYGAAKAAGEVM  147 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSS---SSBCTT-------SCCCCCSHHHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCC---CCCCCC-------CCCCCCChHHHHHHHHHHH
Confidence               25678999999999999999999984 6666542 2221100   011121       2333567899999998888


Q ss_pred             hhhhhcccccceeeeeeeccCccce-------e----c---cccC--------CCcccHHHHHHHHHHHhcc------CC
Q 013761          315 AKFELSETGDAVFSGYVFTRGGYVE-------L----S---KKLS--------LPLGCTLDRYEGLVLSVGG------NG  366 (437)
Q Consensus       315 ~~~~~~~~~~~v~~g~~~~~~G~~~-------i----~---~~~~--------~p~g~v~D~~~gi~l~~~~------~G  366 (437)
                      ......+.+..+...++...||...       .    .   ..+.        ....|++|++++++.++..      .+
T Consensus       148 ~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~  227 (312)
T 3ko8_A          148 CATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF  227 (312)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSE
T ss_pred             HHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCC
Confidence            7766666666666665555544211       0    0   0000        1123799999999998843      34


Q ss_pred             cEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ec-ccCCC---cccCCCCCCCCCHHHHhhccceeeccc
Q 013761          367 RSYVLILEAGPSADRSQSKLYFARFSTKVGFCR-VR-VPFSS---FRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       367 e~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~-iP~~~---~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +.|++  +++.   .+++.|+++.+.+.+|... +. +|...   .++.......+|.+|++.. ++|+|+.
T Consensus       228 ~~~ni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  293 (312)
T 3ko8_A          228 LALNV--GNVD---AVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKL-TGWRPTM  293 (312)
T ss_dssp             EEEEE--SCSS---CEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHH-HCCCCSS
T ss_pred             cEEEE--cCCC---ceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHH-hCCCCCC
Confidence            55655  5443   5789999999999998432 11 22211   1233445568999999777 7888874

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=3.1e-22  Score=198.22  Aligned_cols=256  Identities=15%  Similarity=0.097  Sum_probs=175.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC---C---CeEEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR---G---YSVKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~---G---~~V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+||||||+||||++|+++|+++   |   ++|++++|...   ...+..+  ..++.++.+|++|.+++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            47999999999999999999997   8   99999999642   1122222  357899999999999999999999999


Q ss_pred             EEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          231 IYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       231 Ih~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      ||+||....     .+..++++|+.|+.++++++.+.++ ++.++++. .|+...   ...+.+.       .|..+...
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~---~~~~~E~-------~~~~~~~~  150 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSID---SGSWTES-------SPLEPNSP  150 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCS---SSCBCTT-------SCCCCCSH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCC---CCCCCCC-------CCCCCCCc
Confidence            999997642     3567899999999999999999988 46666542 222110   0111121       12234567


Q ss_pred             hhhhhhhcccchhhhhcccccceeeeeeeccCcccee------------c--cccC--------CCcccHHHHHHHHHHH
Q 013761          304 VVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL------------S--KKLS--------LPLGCTLDRYEGLVLS  361 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i------------~--~~~~--------~p~g~v~D~~~gi~l~  361 (437)
                      |+.+|...+........+++..+...++...||....            .  ..+.        ....+++|++++++.+
T Consensus       151 Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  230 (337)
T 1r6d_A          151 YAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALV  230 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHH
Confidence            8888888887776555555655555555444432110            0  0010        0123899999999988


Q ss_pred             hc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          362 VG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       362 ~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +.  ..|+.|++  ..+.   .+++.|+++.+.+.+|.+...+++...++.......+|.+|+++. ++|+|+.
T Consensus       231 ~~~~~~g~~~~v--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  298 (337)
T 1r6d_A          231 LAGGRAGEIYHI--GGGL---ELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERE-LGYRPQV  298 (337)
T ss_dssp             HHHCCTTCEEEE--CCCC---EEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHH-HCCCCCS
T ss_pred             HhCCCCCCEEEe--CCCC---CccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHH-cCCCCCC
Confidence            74  35778876  3332   468999999999999854222333233333334457899999887 7788763

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.89  E-value=6.3e-22  Score=195.16  Aligned_cols=255  Identities=13%  Similarity=0.118  Sum_probs=170.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~~  238 (437)
                      ||+||||||+||||++|+++|+++|++|++++|+.... ...+..++.++.+|++|.+++.++++  ++|+|||+||...
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH-EDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc-hhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            46899999999999999999999999999999975421 12333478899999999999999999  8999999999764


Q ss_pred             C-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          239 T-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       239 ~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                      .     .+...+++|+.|+.++++++++.+++ +.++++. .|+...   ...+.+.       .|..+...|+.+|..+
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~---~~~~~E~-------~~~~~~~~Y~~sK~~~  149 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVD---VDLITEE-------TMTNPTNTYGETKLAI  149 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCS---SSSBCTT-------SCCCCSSHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCC---CCCCCcC-------CCCCCCChHHHHHHHH
Confidence            2     35678999999999999999998875 6655532 121100   0111121       1222346677777777


Q ss_pred             ccchhhhhcccccceeeeeeeccCccc-------------ee--------c-cc--cC--------------CCcccHHH
Q 013761          312 GMDAKFELSETGDAVFSGYVFTRGGYV-------------EL--------S-KK--LS--------------LPLGCTLD  353 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~~~~~G~~-------------~i--------~-~~--~~--------------~p~g~v~D  353 (437)
                      +........+++..+...++...||..             ..        . ..  +.              ....|++|
T Consensus       150 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~D  229 (330)
T 2c20_A          150 EKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVED  229 (330)
T ss_dssp             HHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHH
T ss_pred             HHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHH
Confidence            776655554445544444443322211             00        0 00  00              01237999


Q ss_pred             HHHHHHHHhcc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccce
Q 013761          354 RYEGLVLSVGG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIR  428 (437)
Q Consensus       354 ~~~gi~l~~~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~  428 (437)
                      ++++++.++..     .++.|++  +++.   .+++.|+++.+.+..|.. +.+.+...++..+....+|.+|+++. ++
T Consensus       230 va~a~~~~~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~-lG  302 (330)
T 2c20_A          230 LVAAHFLGLKDLQNGGESDFYNL--GNGN---GFSVKEIVDAVREVTNHE-IPAEVAPRRAGDPARLVASSQKAKEK-LG  302 (330)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEC--CCTT---CBCHHHHHHHHHHHTTSC-CCEEEECCCSSCCSEECBCCHHHHHH-HC
T ss_pred             HHHHHHHHHhccccCCCCCeEEe--CCCC---CccHHHHHHHHHHHhCCC-CceeeCCCCCCcccccccCHHHHHHH-hC
Confidence            99999988732     3566654  4432   478999999999998842 22211222333444568899999877 78


Q ss_pred             eeccc
Q 013761          429 FEPRR  433 (437)
Q Consensus       429 fep~~  433 (437)
                      |+|+.
T Consensus       303 ~~p~~  307 (330)
T 2c20_A          303 WDPRY  307 (330)
T ss_dssp             CCCSC
T ss_pred             CCCcc
Confidence            88863

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=2.7e-22  Score=196.80  Aligned_cols=253  Identities=11%  Similarity=0.077  Sum_probs=167.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC--
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS--  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~--  238 (437)
                      ||+||||||+||||++|+++|+++| .|+++++.... ........+.++.+|++| +++.++++++|+|||+|+...  
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~-~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~   77 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSG-NEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVR   77 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSC-CGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCC-ChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChh
Confidence            3689999999999999999999999 55555554332 112335678999999999 999999999999999999643  


Q ss_pred             ---CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          239 ---TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       239 ---~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                         ..+...+++|+.|+.++++++++.+++ +.++++. .|+....   ..+.+.       .|..+...|+.+|..++.
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~---~~~~E~-------~~~~~~~~Y~~sK~~~e~  147 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKV---IPTPED-------YPTHPISLYGASKLACEA  147 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSS---SSBCTT-------SCCCCCSHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCC---CCCCCC-------CCCCCCCHHHHHHHHHHH
Confidence               236779999999999999999998874 6666542 2221100   011111       233356778999988888


Q ss_pred             chhhhhcccccceeeeeeeccCcccee-----------c---ccc-C-------CCcccHHHHHHHHHHHhcc--CCcEE
Q 013761          314 DAKFELSETGDAVFSGYVFTRGGYVEL-----------S---KKL-S-------LPLGCTLDRYEGLVLSVGG--NGRSY  369 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G~~~i-----------~---~~~-~-------~p~g~v~D~~~gi~l~~~~--~Ge~y  369 (437)
                      .......+++..+...++...||....           .   ..+ .       ....|++|++++++.++..  .++.|
T Consensus       148 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  227 (313)
T 3ehe_A          148 LIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIF  227 (313)
T ss_dssp             HHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEE
T ss_pred             HHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceE
Confidence            877666666766666666665552110           0   001 0       1123899999999999863  34555


Q ss_pred             EEEccCCCCCCCCcHHHHHHHHHhhhCCc-eeccc-CCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          370 VLILEAGPSADRSQSKLYFARFSTKVGFC-RVRVP-FSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       370 ~l~l~~~~~~~~~s~~e~~~~i~~~~G~~-~v~iP-~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                        |++++.   .+++.|+++.+.+.+|.. .+..+ ....++.......+|.+|++.  ++|+|+.
T Consensus       228 --ni~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~--lG~~p~~  286 (313)
T 3ehe_A          228 --NIGSED---QIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKR--LGWKPRY  286 (313)
T ss_dssp             --ECCCSC---CEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHH--HTCCCSC
T ss_pred             --EECCCC---CeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHH--cCCCCCC
Confidence              445543   578999999999999953 22221 111133344556899999976  5777763

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.89  E-value=4.5e-22  Score=195.45  Aligned_cols=254  Identities=15%  Similarity=0.131  Sum_probs=174.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~  237 (437)
                      ..|+||||||+||||++|+++|+++|++|++++|+....   .+  ++.++.+|++|.+++.+++++  +|+||||||..
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~---~l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   85 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK---LP--NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS   85 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC---CT--TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc---cc--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence            457999999999999999999999999999999986531   12  688999999999999999987  89999999976


Q ss_pred             CC-----chhhHHHHHHHHHHHHHHHHHhc-CC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhh
Q 013761          238 ST-----ITGDLFRVDYQGVYNVTKAFQDF-NN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKY  309 (437)
Q Consensus       238 ~~-----~~~~~~~vNv~gt~~l~~aa~~~-gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~  309 (437)
                      ..     .+...+++|+.|+.++++++.+. ++ ++.++++. .|+.... ....+.+.       .|..+...|+.+|.
T Consensus        86 ~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~-~~~~~~E~-------~~~~~~~~Y~~sK~  157 (321)
T 2pk3_A           86 SVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILP-EESPVSEE-------NQLRPMSPYGVSKA  157 (321)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCG-GGCSBCTT-------SCCBCCSHHHHHHH
T ss_pred             chhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCC-CCCCCCCC-------CCCCCCCccHHHHH
Confidence            42     36679999999999999999776 34 46666542 2221100 00122222       12234577899999


Q ss_pred             hcccchhhhhcccccceeeeeeeccCccce------------ecc---c----cC--------CCcccHHHHHHHHHHHh
Q 013761          310 DAGMDAKFELSETGDAVFSGYVFTRGGYVE------------LSK---K----LS--------LPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       310 a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i~~---~----~~--------~p~g~v~D~~~gi~l~~  362 (437)
                      .++........+++..+...++.+.||...            ...   .    +.        ....+++|++++++.++
T Consensus       158 ~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~  237 (321)
T 2pk3_A          158 SVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLS  237 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHH
Confidence            888877665555565555555444443211            000   0    00        11238999999999888


Q ss_pred             c--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          363 G--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       363 ~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      .  ..|+.|++  ..+.   .+++.|+++.+.+.+|...  ..+|. ..++.......+|.+|+++. ++|+|+.
T Consensus       238 ~~~~~g~~~~i--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~p~-~~~~~~~~~~~~d~~k~~~~-lG~~p~~  305 (321)
T 2pk3_A          238 QYGKTGDVYNV--CSGI---GTRIQDVLDLLLAMANVKIDTELNPL-QLRPSEVPTLIGSNKRLKDS-TGWKPRI  305 (321)
T ss_dssp             HHCCTTCEEEE--SCSC---EEEHHHHHHHHHHHSSSCCEEEECGG-GCCSSCCSBCCBCCHHHHHH-HCCCCCS
T ss_pred             hCCCCCCeEEe--CCCC---CeeHHHHHHHHHHHhCCCCceeeccc-cCCCcccchhccCHHHHHHH-cCCCcCC
Confidence            4  34778876  3332   4789999999999998532  12331 13444456678999999987 7888863

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.89  E-value=4.5e-22  Score=197.09  Aligned_cols=263  Identities=11%  Similarity=0.037  Sum_probs=174.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~  233 (437)
                      ||+||||||+||||++|+++|+++|++|++++|...   ......+  ..++.++.+|++|.+++++++++  +|+||||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            368999999999999999999999999999998532   1111111  23588999999999999999998  9999999


Q ss_pred             ccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc--eeeeecC-CcchhhhhhhhhccCCCC---------cceeec
Q 013761          234 ATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK--LAQLRAG-KSSKSKLLLAKFKSADSL---------NGWEVR  296 (437)
Q Consensus       234 Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk--l~~l~~~-~~g~sk~~~~k~v~~ssl---------~~~i~r  296 (437)
                      ||....     .+...+++|+.|+.++++++.+.+++  +.++++. .|+....   ....+...         ......
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~---~~~~e~~~~~~~~~~~~~~~e~~  157 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQ---YKYNETETRYTCVDKPNGYDEST  157 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTT---SCEEECSSCEEETTCTTCBCTTS
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCc---CCcccccccccccccccCccccC
Confidence            997642     35678999999999999999998874  6666542 2221100   00000000         000011


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce-----------e-----c-c-----ccCC--------
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-----------L-----S-K-----KLSL--------  346 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-----------i-----~-~-----~~~~--------  346 (437)
                      |..+...|+.+|..++........+++..+...++...||...           .     . .     .+..        
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  237 (347)
T 1orr_A          158 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  237 (347)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceE
Confidence            2234567899999888877665555565555555444443210           0     0 0     1110        


Q ss_pred             CcccHHHHHHHHHHHhc----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCCcccCCCCCCCCCHH
Q 013761          347 PLGCTLDRYEGLVLSVG----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSSFRPVKPDDPPMDPF  420 (437)
Q Consensus       347 p~g~v~D~~~gi~l~~~----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~r~~~~~~~~ld~~  420 (437)
                      ...+++|++++++.++.    ..|+.|++..+..   ..+++.|+++.+.+.+|...  ..+|   .++.......+|.+
T Consensus       238 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~---~~~s~~e~~~~i~~~~g~~~~~~~~~---~~~~~~~~~~~d~~  311 (347)
T 1orr_A          238 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIV---NSLSLLELFKLLEDYCNIDMRFTNLP---VRESDQRVFVADIK  311 (347)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGG---GEEEHHHHHHHHHHHHTCCCCEEEEC---CCSSCCSEECBCCH
T ss_pred             eeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCC---CCccHHHHHHHHHHHhCCCCCceeCC---CCCCCcceeecCHH
Confidence            12289999999998874    2578887732211   12689999999999998431  2233   34444445678999


Q ss_pred             HHhhccceeeccc
Q 013761          421 LVHTMTIRFEPRR  433 (437)
Q Consensus       421 ki~~~gi~fep~~  433 (437)
                      |+++. ++|+|+.
T Consensus       312 k~~~~-lG~~p~~  323 (347)
T 1orr_A          312 KITNA-IDWSPKV  323 (347)
T ss_dssp             HHHHH-HCCCCCS
T ss_pred             HHHHH-HCCCccC
Confidence            99877 7888863

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=6.8e-22  Score=198.14  Aligned_cols=257  Identities=16%  Similarity=0.166  Sum_probs=174.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC-------CCCeEEEEecCCCHHHHHHHHhc--cc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML-------PRSVEIVLGDVGDPCTLKAAVEN--CN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~-------~~~v~~v~~Dltd~~~v~~a~~~--~D  228 (437)
                      ||+||||||+||||++|+++|+++|++|++++|+.+.   ..+..+       ..++.++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999997542   111111       24688999999999999999987  59


Q ss_pred             EEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCC----ceeeeecC-CcchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNN----KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gv----kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||....     .+...+++|+.|+.++++++.+.++    ++.++++. .|+...   ...+.+.       .|.
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~---~~~~~E~-------~~~  150 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQ---EIPQKET-------TPF  150 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCC---SSSBCTT-------SCC
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCC---CCCCCcc-------CCC
Confidence            99999997542     2556889999999999999999886    46666542 122110   0011222       122


Q ss_pred             cccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce-----------e------ccccC---------CCcccHH
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-----------L------SKKLS---------LPLGCTL  352 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-----------i------~~~~~---------~p~g~v~  352 (437)
                      .+...|+.+|...+........+++..+...++++.||...           .      .....         ....|++
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence            34578999999998887766666777777778777655210           0      00000         1123899


Q ss_pred             HHHHHHHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ec---ccCC----------------------
Q 013761          353 DRYEGLVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR-VR---VPFS----------------------  405 (437)
Q Consensus       353 D~~~gi~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~---iP~~----------------------  405 (437)
                      |++++++.++. ..++.|++  +++.   .+++.|+++.+.+.+|.+. +.   +|.+                      
T Consensus       231 Dva~a~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  305 (372)
T 1db3_A          231 DYVKMQWMMLQQEQPEDFVI--ATGV---QYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIA  305 (372)
T ss_dssp             HHHHHHHHTTSSSSCCCEEE--CCCC---CEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEE
T ss_pred             HHHHHHHHHHhcCCCceEEE--cCCC---ceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceee
Confidence            99999999884 34566765  4432   4789999999999998421 11   2211                      


Q ss_pred             --C--cccCCCCCCCCCHHHHhhccceeeccc
Q 013761          406 --S--FRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       406 --~--~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                        .  +++.......+|.+|+++. ++|+|+.
T Consensus       306 ~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  336 (372)
T 1db3_A          306 VDPRYFRPAEVETLLGDPTKAHEK-LGWKPEI  336 (372)
T ss_dssp             ECGGGCCCCC-CCCCBCCHHHHHH-HCCCCCS
T ss_pred             ccccccCCCchhhhccCHHHHHHH-hCCcccc
Confidence              1  2333344567899999987 7888864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.89  E-value=8.3e-22  Score=195.72  Aligned_cols=256  Identities=16%  Similarity=0.104  Sum_probs=169.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--------HHHhh----CCCCeEEEEecCCCHHHHHHHHh--c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--------EVVDM----LPRSVEIVLGDVGDPCTLKAAVE--N  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--------~~~~~----~~~~v~~v~~Dltd~~~v~~a~~--~  226 (437)
                      +|+||||||+||||++|+++|+++|++|++++|....        +..+.    ....+.++.+|++|.++++++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            5799999999999999999999999999999985321        11111    23478999999999999999998  7


Q ss_pred             ccEEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCc
Q 013761          227 CNKIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       227 ~D~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +|+|||+||....     .+.+.+++|+.|+.++++++++.+++ +.++++. .|+...   ...+.+.       .|..
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~---~~~~~E~-------~~~~  151 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQ---YLPLDEA-------HPTG  151 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCS---SSSBCTT-------SCCC
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCC---CCCcCCC-------CCCC
Confidence            8999999997642     35678999999999999999998874 6666542 122100   0112222       1111


Q ss_pred             c-cchhhhhhhhcccchhhhhcc-cccceeeeeeeccCccc--------------eec---------cc--cC-------
Q 013761          300 Y-FQDVVAFKYDAGMDAKFELSE-TGDAVFSGYVFTRGGYV--------------ELS---------KK--LS-------  345 (437)
Q Consensus       300 ~-~~~y~~sk~a~~~~~~~~~~~-~~~~v~~g~~~~~~G~~--------------~i~---------~~--~~-------  345 (437)
                      + ...|+.+|..++........+ .+..+...++.+.||..              ...         ..  +.       
T Consensus       152 p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (348)
T 1ek6_A          152 GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYD  231 (348)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCccc
Confidence            2 567888888888776554433 11444444443333220              000         00  00       


Q ss_pred             -------CCcccHHHHHHHHHHHhc----cCC-cEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCC
Q 013761          346 -------LPLGCTLDRYEGLVLSVG----GNG-RSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPD  413 (437)
Q Consensus       346 -------~p~g~v~D~~~gi~l~~~----~~G-e~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~  413 (437)
                             ....|++|++++++.++.    ..| +.|++  +++.   .+++.|+++.+.+..|.+ +++.+...++....
T Consensus       232 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~  305 (348)
T 1ek6_A          232 TEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNL--GTGT---GYSVLQMVQAMEKASGKK-IPYKVVARREGDVA  305 (348)
T ss_dssp             SSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEE--CCSC---CEEHHHHHHHHHHHHCSC-CCEEEECCCTTCCS
T ss_pred             CCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEe--CCCC---CccHHHHHHHHHHHhCCC-CceeeCCCCCccch
Confidence                   012389999999998873    234 66765  4332   478999999999999842 22111122333344


Q ss_pred             CCCCCHHHHhhccceeeccc
Q 013761          414 DPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       414 ~~~ld~~ki~~~gi~fep~~  433 (437)
                      ...+|.+|++.. ++|+|+.
T Consensus       306 ~~~~d~~k~~~~-lG~~p~~  324 (348)
T 1ek6_A          306 ACYANPSLAQEE-LGWTAAL  324 (348)
T ss_dssp             EECBCCHHHHHT-TCCCCCC
T ss_pred             hhccCHHHHHHh-cCCCCCC
Confidence            567899999887 7888863

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1.1e-21  Score=197.40  Aligned_cols=256  Identities=16%  Similarity=0.140  Sum_probs=176.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhh--------CCCCeEEEEecCCCHHHHHHHHhc--cc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDM--------LPRSVEIVLGDVGDPCTLKAAVEN--CN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~--------~~~~v~~v~~Dltd~~~v~~a~~~--~D  228 (437)
                      |+||||||+||||++|+++|+++|++|++++|+.+.   .....        ....+.++.+|++|.+++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            789999999999999999999999999999997542   11111        124688999999999999999987  59


Q ss_pred             EEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCC----ceeeeecC-CcchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNN----KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gv----kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||....     .+...+++|+.|+.++++++.+.++    ++.++++. .|+...   ...+.+.       .|.
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~---~~~~~E~-------~~~  174 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ---EIPQKET-------TPF  174 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCS---SSSBCTT-------SCC
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCC---CCCCCcc-------CCC
Confidence            99999997642     2566899999999999999999886    46666542 222110   0112222       122


Q ss_pred             cccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce-----------e------cccc--C-------CCcccHH
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-----------L------SKKL--S-------LPLGCTL  352 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-----------i------~~~~--~-------~p~g~v~  352 (437)
                      .+...|+.+|...+........+++..+...++++.||...           .      ....  .       ....|++
T Consensus       175 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  254 (375)
T 1t2a_A          175 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK  254 (375)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence            34578999999988887766666677766677776555210           0      0001  0       1123899


Q ss_pred             HHHHHHHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ec---ccCC----------------CcccCC
Q 013761          353 DRYEGLVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR-VR---VPFS----------------SFRPVK  411 (437)
Q Consensus       353 D~~~gi~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~---iP~~----------------~~r~~~  411 (437)
                      |++++++.++. ..++.|++  .++.   .+++.|+++.+.+..|.+. +.   +|.+                .+++..
T Consensus       255 Dva~a~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  329 (375)
T 1t2a_A          255 DYVEAMWLMLQNDEPEDFVI--ATGE---VHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTE  329 (375)
T ss_dssp             HHHHHHHHHHHSSSCCCEEE--CCSC---CEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSC
T ss_pred             HHHHHHHHHHhcCCCceEEE--eCCC---cccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCccc
Confidence            99999999884 34566766  4332   4789999999999998532 11   2322                123333


Q ss_pred             CCCCCCCHHHHhhccceeeccc
Q 013761          412 PDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       412 ~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      .....+|.+|+++. ++|+|+.
T Consensus       330 ~~~~~~d~~k~~~~-lG~~p~~  350 (375)
T 1t2a_A          330 VDFLQGDCTKAKQK-LNWKPRV  350 (375)
T ss_dssp             CCBCCBCCHHHHHH-HCCCCCS
T ss_pred             chhhcCCHHHHHHh-cCCCccC
Confidence            44567899999987 7888863

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.88  E-value=4.4e-22  Score=200.81  Aligned_cols=256  Identities=16%  Similarity=0.168  Sum_probs=177.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC-------CC-CeEEEEecCCCHHHHHHHHhc--c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML-------PR-SVEIVLGDVGDPCTLKAAVEN--C  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~-------~~-~v~~v~~Dltd~~~v~~a~~~--~  227 (437)
                      +|+||||||+||||++|+++|+++|++|++++|+.+.   ..+..+       .. .+.++.+|++|.+++.+++++  +
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            3799999999999999999999999999999997642   011111       12 688999999999999999987  5


Q ss_pred             cEEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCC------ceeeeecC-CcchhhhhhhhhccCCCCcceee
Q 013761          228 NKIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNN------KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       228 D~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gv------kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      |+||||||....     .+...+++|+.|+.++++++.+.++      ++.++++. .|+...    ..+.+.       
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~----~~~~E~-------  176 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP----PPQSET-------  176 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC----SSBCTT-------
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCC----CCCCCC-------
Confidence            999999997653     3567899999999999999988765      56666542 222110    011221       


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee---------------ccc--cC---------CCcc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------------SKK--LS---------LPLG  349 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------------~~~--~~---------~p~g  349 (437)
                      .|..+...|+.+|..++........+++......++++.||....               ...  ..         ....
T Consensus       177 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v  256 (381)
T 1n7h_A          177 TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG  256 (381)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeE
Confidence            123346789999999988877666666666666666665542110               000  10         1123


Q ss_pred             cHHHHHHHHHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce---ecccCCCcccCCCCCCCCCHHHHhhc
Q 013761          350 CTLDRYEGLVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR---VRVPFSSFRPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       350 ~v~D~~~gi~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~---v~iP~~~~r~~~~~~~~ld~~ki~~~  425 (437)
                      +++|++++++.++. ..++.|++  ..+.   .+++.|+++.+.+.+|...   +.+....+++.......+|.+|+++.
T Consensus       257 ~v~Dva~a~~~~~~~~~~~~~~i--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  331 (381)
T 1n7h_A          257 FAGDYVEAMWLMLQQEKPDDYVV--ATEE---GHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEV  331 (381)
T ss_dssp             EHHHHHHHHHHHHTSSSCCEEEE--CCSC---EEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHH
T ss_pred             EHHHHHHHHHHHHhCCCCCeEEe--eCCC---CCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHh
Confidence            89999999999885 34566766  3332   4789999999999998531   12222223455555567899999987


Q ss_pred             cceeeccc
Q 013761          426 TIRFEPRR  433 (437)
Q Consensus       426 gi~fep~~  433 (437)
                       ++|+|+.
T Consensus       332 -lG~~p~~  338 (381)
T 1n7h_A          332 -LGWKPQV  338 (381)
T ss_dssp             -HCCCCCS
T ss_pred             -cCCcccC
Confidence             7888854

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=7e-22  Score=197.38  Aligned_cols=261  Identities=14%  Similarity=0.101  Sum_probs=170.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh--CCCCeEEEEecCCCHHHHHHHHhc--ccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM--LPRSVEIVLGDVGDPCTLKAAVEN--CNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~--~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh  232 (437)
                      |.+|+||||||+||||++|+++|+++|++|++++|+.+.  .....  ...++.++.+|++|.+++.+++++  +|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            567899999999999999999999999999999997642  11121  245789999999999999999987  799999


Q ss_pred             eccCCCC-----chhhHHHHHHHHHHHHHHHHHhcC-C-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          233 CATARST-----ITGDLFRVDYQGVYNVTKAFQDFN-N-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       233 ~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~g-v-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      |||....     .+...+++|+.|+.++++++.+.+ + ++.++++. .|+.....  ..+.+.       .|..+...|
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~E~-------~~~~~~~~Y  157 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI--WGYREN-------EAMGGYDPY  157 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS--SCBCTT-------SCBCCSSHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcC--CCCCCC-------CCCCCCCcc
Confidence            9996432     256789999999999999999876 5 46665542 22211000  011111       122245678


Q ss_pred             hhhhhhcccchhhhhccc---------ccceeeeeeeccCccce---------ec------cccC-------CCcccHHH
Q 013761          305 VAFKYDAGMDAKFELSET---------GDAVFSGYVFTRGGYVE---------LS------KKLS-------LPLGCTLD  353 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~---------~~~v~~g~~~~~~G~~~---------i~------~~~~-------~p~g~v~D  353 (437)
                      +.+|..++........++         +..+...++...||...         +.      ..+.       .+..|++|
T Consensus       158 ~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~D  237 (357)
T 1rkx_A          158 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLE  237 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHH
Confidence            888888877765544433         44444444433333111         00      0000       12238999


Q ss_pred             HHHHHHHHhc-------cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCC-cccCCCCCCCCCHHHHhhc
Q 013761          354 RYEGLVLSVG-------GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSS-FRPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       354 ~~~gi~l~~~-------~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~-~r~~~~~~~~ld~~ki~~~  425 (437)
                      ++++++.++.       ..++.|++  +++. .+.+++.|+++.+.+..|.. +++.+.. .++.......+|.+|+++.
T Consensus       238 va~a~~~~~~~~~~~~~~~~~~~ni--~~~~-~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~  313 (357)
T 1rkx_A          238 PLSGYLLLAQKLYTDGAEYAEGWNF--GPND-ADATPVKNIVEQMVKYWGEG-ASWQLDGNAHPHEAHYLKLDCSKAKMQ  313 (357)
T ss_dssp             HHHHHHHHHHHHHHTCGGGCSEEEC--CCCG-GGCEEHHHHHHHHHHHHCTT-CCEEC-------CCCCCCBCCHHHHHH
T ss_pred             HHHHHHHHHHhhhhcCCCCCceEEE--CCCC-CCcccHHHHHHHHHHHhCCC-CccccCCCCCCcCcccccCCHHHHHHH
Confidence            9999998774       24667765  3320 12478999999999999842 1222211 1344455678999999987


Q ss_pred             cceeeccc
Q 013761          426 TIRFEPRR  433 (437)
Q Consensus       426 gi~fep~~  433 (437)
                       ++|+|+.
T Consensus       314 -lG~~p~~  320 (357)
T 1rkx_A          314 -LGWHPRW  320 (357)
T ss_dssp             -HCCCCCC
T ss_pred             -hCCCcCC
Confidence             7888863

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.88  E-value=4.5e-23  Score=200.57  Aligned_cols=253  Identities=11%  Similarity=0.015  Sum_probs=170.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag  235 (437)
                      .|++|+||||||+||||++|+++|+++|+      +....      ...+.++.+|++|.+++.+++++  +|+|||+||
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~   70 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAA   70 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------ccccCceecccCCHHHHHHHHhhcCCCEEEECce
Confidence            36789999999999999999999999998      21110      01233456899999999999998  899999999


Q ss_pred             CCCC------chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccc-hhhh
Q 013761          236 ARST------ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQ-DVVA  306 (437)
Q Consensus       236 ~~~~------~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~-~y~~  306 (437)
                      ....      .+...+++|+.|+.++++++++.+++ +.++++. .|+...   ...+.+....   ..|..+.. .|+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~---~~~~~E~~~~---~~~~~p~~~~Y~~  144 (319)
T 4b8w_A           71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKT---TYPIDETMIH---NGPPHNSNFGYSY  144 (319)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSC---CSSBCGGGGG---BSCCCSSSHHHHH
T ss_pred             ecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCC---CCCccccccc---cCCCCCCcchHHH
Confidence            8642      35568999999999999999999986 6555542 222110   0112222110   01222233 5888


Q ss_pred             hhhhcccchhhhhcccccceeeeeeeccCccce-------------ec---------cccCC--------CcccHHHHHH
Q 013761          307 FKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-------------LS---------KKLSL--------PLGCTLDRYE  356 (437)
Q Consensus       307 sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-------------i~---------~~~~~--------p~g~v~D~~~  356 (437)
                      +|..++.....+..+.+..+...++...||...             +.         ..+..        ...|++|+++
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  224 (319)
T 4b8w_A          145 AKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQ  224 (319)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHH
Confidence            999888887766666666666666555554221             00         01110        1138999999


Q ss_pred             HHHHHhcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          357 GLVLSVGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       357 gi~l~~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +++.++..  .+...++|++++.   .+++.|+++.+.+.+|.. .++.+...++.......+|.+|+++. ++|.|+.
T Consensus       225 a~~~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~-lg~~p~~  298 (319)
T 4b8w_A          225 LFIWVLREYNEVEPIILSVGEED---EVSIKEAAEAVVEAMDFH-GEVTFDTTKSDGQFKKTASNSKLRTY-LPDFRFT  298 (319)
T ss_dssp             HHHHHHHHCCCSSCEEECCCGGG---CEEHHHHHHHHHHHTTCC-SCEEEETTSCCCCSCCCBCCHHHHHH-CTTCCCC
T ss_pred             HHHHHHhccccCCceEEEecCCC---ceeHHHHHHHHHHHhCCC-CcEEeCCCCCcCcccccCCHHHHHHh-cCCCCCC
Confidence            99998843  2333445555543   578999999999999952 33333344455556678999999997 7888764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.88  E-value=6.5e-22  Score=200.13  Aligned_cols=257  Identities=12%  Similarity=-0.013  Sum_probs=174.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC-
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS-  238 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~-  238 (437)
                      ++|+||||||+||||++|+++|+++|++|++++|+..... ......+.++.+|++|.+++.++++++|+|||+||... 
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~  106 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG  106 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch-hhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCc
Confidence            5689999999999999999999999999999999765311 11124688999999999999999999999999999754 


Q ss_pred             -----CchhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-Ccchhhhhh--hhhccCCCCcceeeccCcccchhhhhhh
Q 013761          239 -----TITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLL--AKFKSADSLNGWEVRQGTYFQDVVAFKY  309 (437)
Q Consensus       239 -----~~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~--~k~v~~ssl~~~i~rP~~~~~~y~~sk~  309 (437)
                           ..+.+.+++|+.|+.++++++++.++ ++.++++. .|+......  ...+.+...     .|..+...|+.+|.
T Consensus       107 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~-----~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          107 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDA-----WPAEPQDAFGLEKL  181 (379)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG-----SSBCCSSHHHHHHH
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccC-----CCCCCCChhHHHHH
Confidence                 23567899999999999999999988 46666542 222111000  001111110     12234567888998


Q ss_pred             hcccchhhhhcccccceeeeeeeccCccce------------e------ccc-cC--------CCcccHHHHHHHHHHHh
Q 013761          310 DAGMDAKFELSETGDAVFSGYVFTRGGYVE------------L------SKK-LS--------LPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       310 a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i------~~~-~~--------~p~g~v~D~~~gi~l~~  362 (437)
                      ..+........+.+..+...++...||...            .      ... +.        ....|++|++++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            888777655555565555555444443210            0      000 10        11237999999999988


Q ss_pred             c-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCCcccCCCCCCCCCHHHHhhccceeecc
Q 013761          363 G-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       363 ~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      . ..++.|++  ..+.   .+++.|+++.+.+.+|...  ..+|..    .......+|.+|++.. ++|+|+
T Consensus       262 ~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~p~~----~~~~~~~~d~~k~~~~-lG~~p~  324 (379)
T 2c5a_A          262 KSDFREPVNI--GSDE---MVSMNEMAEMVLSFEEKKLPIHHIPGP----EGVRGRNSDNNLIKEK-LGWAPN  324 (379)
T ss_dssp             HSSCCSCEEE--CCCC---CEEHHHHHHHHHHTTTCCCCEEEECCC----CCCSBCEECCHHHHHH-HSCCCC
T ss_pred             hccCCCeEEe--CCCC---ccCHHHHHHHHHHHhCCCCceeeCCCC----CCcccccCCHHHHHHH-hCCCCC
Confidence            4 35677766  3332   5789999999999998431  224431    1233457899999987 788886

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.88  E-value=4e-21  Score=190.23  Aligned_cols=255  Identities=16%  Similarity=0.108  Sum_probs=169.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHH---Hhh-CCCCeEEEEecCCCHHHHHHHHhc--ccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEV---VDM-LPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~---~~~-~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~  233 (437)
                      |+||||||+||||++|+++|+++|++|++++|...  ...   +.. ....+.++.+|++|.+++++++++  +|+||||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            47999999999999999999999999999987432  111   111 134678999999999999999975  8999999


Q ss_pred             ccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCc-ccchhh
Q 013761          234 ATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGT-YFQDVV  305 (437)
Q Consensus       234 Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~-~~~~y~  305 (437)
                      ||....     .+.+.+++|+.|+.++++++++.+++ +.++++. .|+...   ...+.+.       .|.. ....|+
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~---~~~~~e~-------~~~~~~~~~Y~  150 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNP---KIPYVES-------FPTGTPQSPYG  150 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCC---SSSBCTT-------SCCCCCSSHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCC---CCCcCcc-------cCCCCCCChHH
Confidence            997542     24568999999999999999988874 6665532 122100   0011111       1111 256788


Q ss_pred             hhhhhcccchhhhhccc-ccceeeeeeeccCccc-------------e-ec---------cc--c-------CC------
Q 013761          306 AFKYDAGMDAKFELSET-GDAVFSGYVFTRGGYV-------------E-LS---------KK--L-------SL------  346 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~-~~~v~~g~~~~~~G~~-------------~-i~---------~~--~-------~~------  346 (437)
                      .+|...+........+. +..+...|+++.||..             . ..         ..  +       ..      
T Consensus       151 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  230 (338)
T 1udb_A          151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCcee
Confidence            99988887775554444 4556666655544420             0 00         00  0       00      


Q ss_pred             -CcccHHHHHHHHHHHhcc----CC-cEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHH
Q 013761          347 -PLGCTLDRYEGLVLSVGG----NG-RSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPF  420 (437)
Q Consensus       347 -p~g~v~D~~~gi~l~~~~----~G-e~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~  420 (437)
                       ...|++|++++++.++..    .+ +.|++  +++.   .+++.|+++.+.+.+|.+ +.+.+...++.......+|.+
T Consensus       231 ~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni--~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~  304 (338)
T 1udb_A          231 RDYIHVMDLADGHVVAMEKLANKPGVHIYNL--GAGV---GNSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADAS  304 (338)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHTTCCEEEEEEE--SCSC---CEEHHHHHHHHHHHHTSC-CCEEEECCCTTCCSBCCBCCH
T ss_pred             eeeEEHHHHHHHHHHHHhhhhccCCCcEEEe--cCCC---ceeHHHHHHHHHHHhCCC-CcceeCCCCCCchhhhhcCHH
Confidence             123899999999988742    22 45554  5443   578999999999999852 222222233444455678999


Q ss_pred             HHhhccceeeccc
Q 013761          421 LVHTMTIRFEPRR  433 (437)
Q Consensus       421 ki~~~gi~fep~~  433 (437)
                      |+++. ++|+|+.
T Consensus       305 k~~~~-lG~~p~~  316 (338)
T 1udb_A          305 KADRE-LNWRVTR  316 (338)
T ss_dssp             HHHHH-HCCCCCC
T ss_pred             HHHHH-cCCCcCC
Confidence            99877 7888863

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.88  E-value=1.9e-21  Score=192.45  Aligned_cols=263  Identities=13%  Similarity=0.033  Sum_probs=172.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcHHHHhhCCCCeEEEEecCCC-HHHHHHHHhcccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDMLPRSVEIVLGDVGD-PCTLKAAVENCNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd-~~~v~~a~~~~D~VIh~Ag~~~~  239 (437)
                      |+||||||+||||++|+++|+++ |++|++++|+.+..........+.++.+|++| .+.++++++++|+|||+||....
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            58999999999999999999998 89999999986531111113478999999998 46788999999999999997653


Q ss_pred             -----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccC-cccchhhhhhhhcc
Q 013761          240 -----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQG-TYFQDVVAFKYDAG  312 (437)
Q Consensus       240 -----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~-~~~~~y~~sk~a~~  312 (437)
                           .+...+++|+.++.++++++++.+.++.++++. .|+...   ...+.+..... ...|. .+...|+.+|..++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~---~~~~~e~~~~~-~~~~~~~~~~~Y~~sK~~~e  156 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCS---DKYFDEDHSNL-IVGPVNKPRWIYSVSKQLLD  156 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCC---CSSBCTTTCCC-BCCCTTCGGGHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCC---CCCcCCccccc-ccCcccCcccccHHHHHHHH
Confidence                 245689999999999999999988666666642 222110   01122221110 01111 23457888998888


Q ss_pred             cchhhhhcccccceeeeeeeccCccce----------------e----c--cccC--------CCcccHHHHHHHHHHHh
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGYVE----------------L----S--KKLS--------LPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~~~----------------i----~--~~~~--------~p~g~v~D~~~gi~l~~  362 (437)
                      ........+.+..+...++...||...                .    .  ..+.        ....|++|++++++.++
T Consensus       157 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  236 (345)
T 2bll_A          157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII  236 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHH
Confidence            877665555566555555554444211                0    0  0010        01238999999999988


Q ss_pred             cc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCCcc------------cCCCCCCCCCHHHHh
Q 013761          363 GG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSSFR------------PVKPDDPPMDPFLVH  423 (437)
Q Consensus       363 ~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~r------------~~~~~~~~ld~~ki~  423 (437)
                      ..     .|+.|++.  ++.  ..+++.|+++.+.+.+|...  +.+|.....            ........+|.+|++
T Consensus       237 ~~~~~~~~g~~~~i~--~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (345)
T 2bll_A          237 ENAGNRCDGEIINIG--NPE--NEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAH  312 (345)
T ss_dssp             HCGGGTTTTEEEEEC--CTT--SEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHH
T ss_pred             hhccccCCCceEEeC--CCC--CCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHHHH
Confidence            42     46778763  221  13689999999999987432  233322110            112345678999998


Q ss_pred             hccceeeccc
Q 013761          424 TMTIRFEPRR  433 (437)
Q Consensus       424 ~~gi~fep~~  433 (437)
                      +. ++|+|+.
T Consensus       313 ~~-lG~~p~~  321 (345)
T 2bll_A          313 RC-LDWEPKI  321 (345)
T ss_dssp             HH-HCCCCCC
T ss_pred             Hh-cCCCccc
Confidence            87 7888864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=2e-21  Score=196.55  Aligned_cols=259  Identities=13%  Similarity=0.075  Sum_probs=169.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHH-HCCCeEEEEecCCcH----------HHH----hhC-----CCC---eEEEEecCCCH
Q 013761          161 NTTVLVVGATSRIGRIVIRKLM-LRGYSVKALVRKADQ----------EVV----DML-----PRS---VEIVLGDVGDP  217 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll-~~G~~V~~~~R~~~~----------~~~----~~~-----~~~---v~~v~~Dltd~  217 (437)
                      +|+||||||+||||++|+++|+ ++|++|++++|+...          +.+    +.+     ...   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999986532          111    112     124   88999999999


Q ss_pred             HHHHHHHh--c-ccEEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-Ccchhhhh----hhh
Q 013761          218 CTLKAAVE--N-CNKIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLL----LAK  283 (437)
Q Consensus       218 ~~v~~a~~--~-~D~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~----~~k  283 (437)
                      +++.++++  + +|+||||||....     .+..++++|+.|+.++++++++.+++ +.++++. .++.....    ...
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            99999998  6 9999999997643     35678999999999999999998874 5555532 12111000    000


Q ss_pred             hccCCCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccc-------------------------
Q 013761          284 FKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYV-------------------------  338 (437)
Q Consensus       284 ~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~-------------------------  338 (437)
                      .+.+.       .|..+...|+.+|..++........+++..+...++...||..                         
T Consensus       162 ~~~E~-------~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~  234 (397)
T 1gy8_A          162 PIDIN-------AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS  234 (397)
T ss_dssp             CBCTT-------SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred             CcCcc-------CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHH
Confidence            11111       1222356788888877777655554445544444443333210                         


Q ss_pred             ee-c-c------------ccC--------------CCcccHHHHHHHHHHHhcc---CC--------cEEEEEccCCCCC
Q 013761          339 EL-S-K------------KLS--------------LPLGCTLDRYEGLVLSVGG---NG--------RSYVLILEAGPSA  379 (437)
Q Consensus       339 ~i-~-~------------~~~--------------~p~g~v~D~~~gi~l~~~~---~G--------e~y~l~l~~~~~~  379 (437)
                      .. . .            .+.              ....|++|++++++.++..   .+        +.|++  +++.  
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni--~~~~--  310 (397)
T 1gy8_A          235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNL--GTSR--  310 (397)
T ss_dssp             HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEE--SCSC--
T ss_pred             HHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEe--CCCC--
Confidence            00 0 0            000              0123899999999988732   22        56655  4432  


Q ss_pred             CCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          380 DRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       380 ~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                       .+++.|+++.+.+.+|.. +++.+...++..+....+|.+|++.. ++|+|+.
T Consensus       311 -~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  361 (397)
T 1gy8_A          311 -GYSVREVIEVARKTTGHP-IPVRECGRREGDPAYLVAASDKAREV-LGWKPKY  361 (397)
T ss_dssp             -CEEHHHHHHHHHHHHCCC-CCEEEECCCTTCCSEECBCCHHHHHH-TCCCCSC
T ss_pred             -cccHHHHHHHHHHHhCCC-CCeeeCCCCCCcccccccCHHHHHHH-hCCCCCc
Confidence             478999999999999842 22211122333444568899999887 7888863

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.88  E-value=1.4e-21  Score=195.00  Aligned_cols=265  Identities=12%  Similarity=0.090  Sum_probs=173.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCc---HHHHhhC--CCCeEEEEecCCCHHHHHHHHh--cccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKAD---QEVVDML--PRSVEIVLGDVGDPCTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~---~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~  233 (437)
                      |+||||||+||||++|+++|++. |++|++++|+..   .+.+..+  ..++.++.+|++|.+++.++++  ++|+||||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999998 799999999652   1122222  3478999999999999999998  89999999


Q ss_pred             ccCCCC-----chhhHHHHHHHHHHHHHHHHHhc--CC--------ceeeeecC-CcchhhhhhhhhccCCCC-cceeec
Q 013761          234 ATARST-----ITGDLFRVDYQGVYNVTKAFQDF--NN--------KLAQLRAG-KSSKSKLLLAKFKSADSL-NGWEVR  296 (437)
Q Consensus       234 Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~--gv--------kl~~l~~~-~~g~sk~~~~k~v~~ssl-~~~i~r  296 (437)
                      ||....     .+..++++|+.|+.++++++.+.  ++        ++.++++. .|+..... ......... ....-.
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~-~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHP-DEVENSVTLPLFTETT  159 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCG-GGSCTTSCCCCBCTTS
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccc-ccccccccCCCCCCCC
Confidence            998642     35678999999999999999988  75        56666542 22211000 000000000 001111


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------e----c--cccC--------CCcccHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L----S--KKLS--------LPLGCTLDR  354 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i----~--~~~~--------~p~g~v~D~  354 (437)
                      |..+...|+.+|..++........+++..+...++...||...        .    .  ..+.        ....+++|+
T Consensus       160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence            2334678999999988887666555566555555544444211        0    0  0010        012389999


Q ss_pred             HHHHHHHhc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceec-ccCC------CcccCCCCCCCCCHHHHhhc
Q 013761          355 YEGLVLSVG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVR-VPFS------SFRPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       355 ~~gi~l~~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~-iP~~------~~r~~~~~~~~ld~~ki~~~  425 (437)
                      +++++.++.  ..|+.|++.  .+.   .+++.|+++.+.+.+|..... .|+.      ..++.......+|.+|+++.
T Consensus       240 a~a~~~~~~~~~~g~~~~v~--~~~---~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~  314 (361)
T 1kew_A          240 ARALHMVVTEGKAGETYNIG--GHN---EKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRE  314 (361)
T ss_dssp             HHHHHHHHHHCCTTCEEEEC--CCC---EEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCEEEec--CCC---eeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHH
Confidence            999998884  357788773  332   468999999999998832111 1211      12232334457899999987


Q ss_pred             cceeeccc
Q 013761          426 TIRFEPRR  433 (437)
Q Consensus       426 gi~fep~~  433 (437)
                       ++|+|+.
T Consensus       315 -lG~~p~~  321 (361)
T 1kew_A          315 -LGWKPLE  321 (361)
T ss_dssp             -HCCCCSC
T ss_pred             -hCCCCcc
Confidence             7888863

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.87  E-value=1.4e-21  Score=193.67  Aligned_cols=251  Identities=15%  Similarity=0.112  Sum_probs=162.7

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIY  232 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh  232 (437)
                      ..+.+|+||||||+||||++|+++|+++|++|++++|+....  ....+ .++.++.+|++|.+++.++++  ++|+|||
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih   94 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSFKPTHVVH   94 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence            347889999999999999999999999999999999965421  11222 478899999999999999999  8999999


Q ss_pred             eccCCCC-c--hhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhh
Q 013761          233 CATARST-I--TGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAF  307 (437)
Q Consensus       233 ~Ag~~~~-~--~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~s  307 (437)
                      |||.... .  ... +++|+.|+.++++++.+.++ ++.++++. .++..... ...+.+..         .+...|+.+
T Consensus        95 ~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~-~~~~~E~~---------~~~~~Y~~s  163 (330)
T 2pzm_A           95 SAAAYKDPDDWAED-AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATV-PIPIDSPT---------APFTSYGIS  163 (330)
T ss_dssp             CCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSS-SBCTTCCC---------CCCSHHHHH
T ss_pred             CCccCCCccccChh-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccC-CCCcCCCC---------CCCChHHHH
Confidence            9997653 1  112 89999999999999998887 46555532 11110000 00111111         124567777


Q ss_pred             hhhcccchhhhhcccccceee---eeeeccCcccee-----c-----ccc-----CCCcccHHHHHH-HHHHHhccC-Cc
Q 013761          308 KYDAGMDAKFELSETGDAVFS---GYVFTRGGYVEL-----S-----KKL-----SLPLGCTLDRYE-GLVLSVGGN-GR  367 (437)
Q Consensus       308 k~a~~~~~~~~~~~~~~~v~~---g~~~~~~G~~~i-----~-----~~~-----~~p~g~v~D~~~-gi~l~~~~~-Ge  367 (437)
                      |...+......    +.....   ..+++++.....     .     ..+     .....+++|+++ +++.++..+ |+
T Consensus       164 K~~~e~~~~~~----~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~g~  239 (330)
T 2pzm_A          164 KTAGEAFLMMS----DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRPTG  239 (330)
T ss_dssp             HHHHHHHHHTC----SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCCCE
T ss_pred             HHHHHHHHHHc----CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCCCC
Confidence            77666554332    222222   333333310000     0     000     112348999999 999888433 67


Q ss_pred             EEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHH-----hhccceeeccc
Q 013761          368 SYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLV-----HTMTIRFEPRR  433 (437)
Q Consensus       368 ~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki-----~~~gi~fep~~  433 (437)
                      .|++  ..+.   .+++.|+++.+.+.+|..  .+.+...++ ......+|.+|+     +.  ++|+|+.
T Consensus       240 ~~~v--~~~~---~~s~~e~~~~i~~~~g~~--~~~~~~~~~-~~~~~~~d~~k~~~~~l~~--lG~~p~~  300 (330)
T 2pzm_A          240 VFNV--STGE---GHSIKEVFDVVLDYVGAT--LAEPVPVVA-PGADDVPSVVLDPSKTETE--FGWKAKV  300 (330)
T ss_dssp             EEEE--SCSC---CEEHHHHHHHHHHHHTCC--CSSCCCEEC-CCTTSCSEECBCCHHHHHH--HCCCCCC
T ss_pred             EEEe--CCCC---CCCHHHHHHHHHHHhCCC--CceeCCCCc-chhhccCCHHHHhhchHHH--cCCcccC
Confidence            7766  3332   468999999999999864  332222233 345567888888     66  6777753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.87  E-value=4.1e-21  Score=190.54  Aligned_cols=254  Identities=13%  Similarity=0.064  Sum_probs=161.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCC--CCeEEEEecCCCHHHHHHHHhc--ccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLP--RSVEIVLGDVGDPCTLKAAVEN--CNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~A  234 (437)
                      +.+|+||||||+||||++|+++|+++|++|++++|+.... .+.+.  .++.++.+|++|.+++++++++  +|+|||||
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR-REHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc-hhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            6778999999999999999999999999999999975421 11121  4788999999999999999998  99999999


Q ss_pred             cCCCCc--hhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCccc-chhhhhhh
Q 013761          235 TARSTI--TGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYF-QDVVAFKY  309 (437)
Q Consensus       235 g~~~~~--~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~-~~y~~sk~  309 (437)
                      |.....  .+..+++|+.|+.++++++.+.++ ++.++++. .|+.........+.+..         .+. ..|+.+|.
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~---------~p~~~~Y~~sK~  168 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPR---------NPANSSYAISKS  168 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCC---------CCTTCHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCC---------CCCCCchHHHHH
Confidence            986541  111189999999999999999887 46665532 11100000000111111         123 56777777


Q ss_pred             hcccchhh-hhcccccceeeeeeeccCc---cce-ec----c-------ccCCCcccHHHHHHHHHHHhccC-CcEEEEE
Q 013761          310 DAGMDAKF-ELSETGDAVFSGYVFTRGG---YVE-LS----K-------KLSLPLGCTLDRYEGLVLSVGGN-GRSYVLI  372 (437)
Q Consensus       310 a~~~~~~~-~~~~~~~~v~~g~~~~~~G---~~~-i~----~-------~~~~p~g~v~D~~~gi~l~~~~~-Ge~y~l~  372 (437)
                      ..+..... ..  ....+.++.+++++.   +.. ..    .       .......+++|++++++.++..+ |+.|++ 
T Consensus       169 ~~E~~~~~s~~--~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~g~~~~v-  245 (333)
T 2q1w_A          169 ANEDYLEYSGL--DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVGHGAYHF-  245 (333)
T ss_dssp             HHHHHHHHHTC--CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCCCEEEEC-
T ss_pred             HHHHHHHhhhC--CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCCCCEEEe-
Confidence            76665543 22  111122223333321   000 00    0       00012237999999999988533 666655 


Q ss_pred             ccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCccc----CCCCCCCCCHHHHhhccceeeccc
Q 013761          373 LEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRP----VKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       373 l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~----~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                       ..+.   .+++.|+++.+.+.+|..  ++.+...++    .-.....+|.+|++++  +|+|+.
T Consensus       246 -~~~~---~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~d~~k~~~~--G~~p~~  302 (333)
T 2q1w_A          246 -SSGT---DVAIKELYDAVVEAMALP--SYPEPEIRELGPDDAPSILLDPSRTIQDF--GKIEFT  302 (333)
T ss_dssp             -SCSC---CEEHHHHHHHHHHHTTCS--SCCCCEEEECCTTSCCCCCBCCHHHHHHH--CCCCCC
T ss_pred             -CCCC---CccHHHHHHHHHHHhCCC--CceeCCCCCcccccccccccCCHHHHHhc--CCCcCC
Confidence             4332   478999999999999864  222222211    1125678999999998  777753

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.87  E-value=1.9e-21  Score=188.24  Aligned_cols=238  Identities=14%  Similarity=0.096  Sum_probs=162.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~~~  239 (437)
                      |+||||||+||||++|+++|+++|++|++++|.                .+|++|.+++.++++  ++|+|||+||....
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            489999999999999999999999999999993                279999999999998  58999999998652


Q ss_pred             -----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          240 -----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       240 -----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                           .+...+++|+.|+.++++++++.++++.++++. .|+...   ...+.+.       .|..+.+.|+.+|..++.
T Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~---~~~~~E~-------~~~~p~~~Y~~sK~~~E~  139 (287)
T 3sc6_A           70 DQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDR---PEGYDEF-------HNPAPINIYGASKYAGEQ  139 (287)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCC---SSCBCTT-------SCCCCCSHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCC---CCCCCCC-------CCCCCCCHHHHHHHHHHH
Confidence                 467799999999999999999999987777643 222110   0112222       223345678888888777


Q ss_pred             chhhhhcccccceeeeeeeccCcc--ce-e------cccc------CCCcccHHHHHHHHHHHhcc-CCcEEEEEccCCC
Q 013761          314 DAKFELSETGDAVFSGYVFTRGGY--VE-L------SKKL------SLPLGCTLDRYEGLVLSVGG-NGRSYVLILEAGP  377 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G~--~~-i------~~~~------~~p~g~v~D~~~gi~l~~~~-~Ge~y~l~l~~~~  377 (437)
                      .......++ ..+.++.++++++.  .. +      ...+      .....|++|++++++.++.. .++.|++  .++.
T Consensus       140 ~~~~~~~~~-~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i--~~~~  216 (287)
T 3sc6_A          140 FVKELHNKY-FIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLYGTYHV--SNTG  216 (287)
T ss_dssp             HHHHHCSSE-EEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCCCEEEEC--CCBS
T ss_pred             HHHHhCCCc-EEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCCCCeEEE--cCCC
Confidence            665443322 22333333333220  00 0      0000      01123799999999999853 3555644  5443


Q ss_pred             CCCCCcHHHHHHHHHhhhCCce--ecccCC--CcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          378 SADRSQSKLYFARFSTKVGFCR--VRVPFS--SFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       378 ~~~~~s~~e~~~~i~~~~G~~~--v~iP~~--~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                         .+++.|+++.+.+..|...  ..+|..  ..+...+....+|.+|++.  ++|+|+.
T Consensus       217 ---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~--lg~~p~~  271 (287)
T 3sc6_A          217 ---SCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRL--NGFLQMP  271 (287)
T ss_dssp             ---CEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHH--TTCCCCC
T ss_pred             ---cccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHh--hCCCCCc
Confidence               4789999999999999432  223332  2233345567899999993  6777764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.87  E-value=3.2e-22  Score=194.05  Aligned_cols=241  Identities=13%  Similarity=0.065  Sum_probs=163.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-ccEEEEeccCCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-CNKIIYCATARS  238 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-~D~VIh~Ag~~~  238 (437)
                      ++|+||||| +||||++|+++|+++|++|++++|+.+.     +...+.++.+|++|.+++.+++++ +|+|||+||...
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~   75 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP-----MPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE   75 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC-----CCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc-----cccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC
Confidence            467999999 5999999999999999999999998653     346789999999999999999998 999999999765


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchh
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~  316 (437)
                      ..+...+++|+.++.++++++++.+++ +.++++. .|+...   ...+.+.       .|..+.+.|+.+|..++.. .
T Consensus        76 ~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~---~~~~~E~-------~~~~p~~~Y~~sK~~~E~~-~  144 (286)
T 3gpi_A           76 YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEV---EEWLDED-------TPPIAKDFSGKRMLEAEAL-L  144 (286)
T ss_dssp             HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCC---SSEECTT-------SCCCCCSHHHHHHHHHHHH-G
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCC---CCCCCCC-------CCCCCCChhhHHHHHHHHH-H
Confidence            556778899999999999999988875 6665542 222110   0111222       1223456788888887766 4


Q ss_pred             hhhcccccceeeeeeeccCccce------ecccc-------CCCcccHHHHHHHHHHHhc-----cCCcEEEEEccCCCC
Q 013761          317 FELSETGDAVFSGYVFTRGGYVE------LSKKL-------SLPLGCTLDRYEGLVLSVG-----GNGRSYVLILEAGPS  378 (437)
Q Consensus       317 ~~~~~~~~~v~~g~~~~~~G~~~------i~~~~-------~~p~g~v~D~~~gi~l~~~-----~~Ge~y~l~l~~~~~  378 (437)
                      ..     ......++...||...      +....       .....+++|++++++.++.     ..|+.|++  .++. 
T Consensus       145 ~~-----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~--~~~~-  216 (286)
T 3gpi_A          145 AA-----YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIV--TDNQ-  216 (286)
T ss_dssp             GG-----SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEE--CCSC-
T ss_pred             hc-----CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEE--eCCC-
Confidence            32     3334444444443211      00100       0112389999999998884     34677866  3332 


Q ss_pred             CCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          379 ADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       379 ~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                        .+++.|+++.+.+.+|.. ..+.+..   .......+|.+|++ . ++|+|+.
T Consensus       217 --~~s~~e~~~~i~~~~g~~-~~~~~~~---~~~~~~~~d~~k~~-~-lG~~p~~  263 (286)
T 3gpi_A          217 --PLPVHDLLRWLADRQGIA-YPAGATP---PVQGNKKLSNARLL-A-SGYQLIY  263 (286)
T ss_dssp             --CEEHHHHHHHHHHHTTCC-CCCSCCC---CBCSSCEECCHHHH-H-TTCCCSS
T ss_pred             --CCCHHHHHHHHHHHcCCC-CCCCCCc---ccCCCeEeeHHHHH-H-cCCCCcC
Confidence              478999999999999953 2222221   33556789999998 4 6787763

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.87  E-value=4.3e-21  Score=189.90  Aligned_cols=252  Identities=13%  Similarity=0.073  Sum_probs=163.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC-
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS-  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~-  238 (437)
                      +|+||||||+||||++|+++|+++|++|++++|+....  ..+ ..++.++.+|++|.+++.++++++|+|||+||... 
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   90 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI--QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPS   90 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG--GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh--hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcC
Confidence            35899999999999999999999999999999986531  111 13688999999999999999999999999999754 


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcc----cchhhhhhhh
Q 013761          239 --TITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTY----FQDVVAFKYD  310 (437)
Q Consensus       239 --~~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~----~~~y~~sk~a  310 (437)
                        ..+.+.+++|+.|+.++++++.+.++ ++.++++. .|+.....  ....+.       .|..+    ...|+.+|..
T Consensus        91 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~--~~~~E~-------~~~~p~~~~~~~Y~~sK~~  161 (342)
T 2x4g_A           91 RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQG--LPGHEG-------LFYDSLPSGKSSYVLCKWA  161 (342)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTS--SCBCTT-------CCCSSCCTTSCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCC--CCCCCC-------CCCCccccccChHHHHHHH
Confidence              23567899999999999999999987 46666542 22211100  011121       11122    5678888888


Q ss_pred             cccchhhhhcccccceeeeeeeccCccce----ec-------cc--cC-----CCcccHHHHHHHHHHHhc--cCCcEEE
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVE----LS-------KK--LS-----LPLGCTLDRYEGLVLSVG--GNGRSYV  370 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~----i~-------~~--~~-----~p~g~v~D~~~gi~l~~~--~~Ge~y~  370 (437)
                      .+........+ +..+...++...||...    +.       ..  +.     ....+++|++++++.++.  ..|+.|+
T Consensus       162 ~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~  240 (342)
T 2x4g_A          162 LDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYL  240 (342)
T ss_dssp             HHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             HHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCceEE
Confidence            77766544333 54444444433333211    00       00  00     112389999999999884  2377887


Q ss_pred             EEccCCCCCCCCcHHHHHHHHHhhhCCcee-cccCCCcc--------------------cC----CCCCCCCCHHHHhhc
Q 013761          371 LILEAGPSADRSQSKLYFARFSTKVGFCRV-RVPFSSFR--------------------PV----KPDDPPMDPFLVHTM  425 (437)
Q Consensus       371 l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v-~iP~~~~r--------------------~~----~~~~~~ld~~ki~~~  425 (437)
                      +.  .+   . +++.|+++.+.+..|.... .+|.+.++                    +.    -.....+|.+|+++.
T Consensus       241 v~--~~---~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  314 (342)
T 2x4g_A          241 LT--GH---N-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREE  314 (342)
T ss_dssp             EC--CE---E-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHH
T ss_pred             Ec--CC---c-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHh
Confidence            73  22   2 6899999999999984321 34433110                    00    024567899999987


Q ss_pred             ccee-ec
Q 013761          426 TIRF-EP  431 (437)
Q Consensus       426 gi~f-ep  431 (437)
                       ++| +|
T Consensus       315 -lG~~~p  320 (342)
T 2x4g_A          315 -LGFFST  320 (342)
T ss_dssp             -HCCCCC
T ss_pred             -CCCCCC
Confidence             778 77

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=1.8e-21  Score=190.24  Aligned_cols=252  Identities=13%  Similarity=0.003  Sum_probs=170.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~  236 (437)
                      +|+||||||+||||++|+++|+++  |++|++++|+......   ...+.++.+|++|.+++.++++  ++|+|||+||.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV---VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH---HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc---cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            578999999999999999999998  8999999997653111   1256789999999999999998  78999999997


Q ss_pred             CCC----chhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhh
Q 013761          237 RST----ITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       237 ~~~----~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                      ...    .+...+++|+.|+.++++++++.++ ++.++++. .|+....  ...+.+.       .|..+...|+.+|..
T Consensus        79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~-------~~~~~~~~Y~~sK~~  149 (312)
T 2yy7_A           79 LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTP--KENTPQY-------TIMEPSTVYGISKQA  149 (312)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSC--SSSBCSS-------CBCCCCSHHHHHHHH
T ss_pred             CCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCC--CCCcccc-------CcCCCCchhHHHHHH
Confidence            542    3566899999999999999999888 45555532 2221100  0011111       122345778999998


Q ss_pred             cccchhhhhcccccceeeeeeeccCccc------------e-----e-ccccC--------CCcccHHHHHHHHHHHhcc
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYV------------E-----L-SKKLS--------LPLGCTLDRYEGLVLSVGG  364 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~------------~-----i-~~~~~--------~p~g~v~D~~~gi~l~~~~  364 (437)
                      .+........+++..+...++...||..            .     . ...+.        ....|++|++++++.++..
T Consensus       150 ~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  229 (312)
T 2yy7_A          150 GERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKA  229 (312)
T ss_dssp             HHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhC
Confidence            8877765555555555554544433310            0     0 00000        1113899999999988842


Q ss_pred             C------CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccC---CCCCCCCCHHHHhhccceeeccc
Q 013761          365 N------GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPV---KPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       365 ~------Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~---~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +      |+.|++  +..    .+++.|+++.+.+..|.  ..+++......   ......+|.+|+++. ++|+|+.
T Consensus       230 ~~~~~~~~~~~ni--~~~----~~s~~e~~~~i~~~~~~--~~i~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  298 (312)
T 2yy7_A          230 PVEKIKIHSSYNL--AAM----SFTPTEIANEIKKHIPE--FTITYEPDFRQKIADSWPASIDDSQARED-WDWKHTF  298 (312)
T ss_dssp             CGGGCCCSSCEEC--CSE----EECHHHHHHHHHTTCTT--CEEEECCCTHHHHHTTSCSSBCCHHHHHH-HCCCCCC
T ss_pred             cccccccCceEEe--CCC----ccCHHHHHHHHHHHCCC--CceEeccCccccccccccccCCHHHHHHH-cCCCCCC
Confidence            1      367766  322    47899999999999882  23333221110   122347899999987 7888874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.86  E-value=2.6e-21  Score=189.70  Aligned_cols=245  Identities=12%  Similarity=0.059  Sum_probs=134.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~  238 (437)
                      +|+||||||+||||++|+++|+++|++|++++|+...      + +  ++.+|++|.+++.+++++  +|+||||||...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~-~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   72 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------P-K--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR   72 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------C-C--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence            5799999999999999999999999999999986542      1 2  778999999999999986  899999999754


Q ss_pred             C-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          239 T-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       239 ~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                      .     .+.+.+++|+.|+.++++++.+.++++.++++.. |+..    ...+.+.       .|..+...|+.+|...+
T Consensus        73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~----~~~~~E~-------~~~~~~~~Y~~sK~~~e  141 (315)
T 2ydy_A           73 PDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT----NPPYREE-------DIPAPLNLYGKTKLDGE  141 (315)
T ss_dssp             ---------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSS----SCSBCTT-------SCCCCCSHHHHHHHHHH
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCC----CCCCCCC-------CCCCCcCHHHHHHHHHH
Confidence            2     3567899999999999999999888877766421 2110    0111111       11123455666666655


Q ss_pred             cchhhhhcccccceeeeeeeccCcc-----ce-e------c-cc------cCCCcccHHHHHHHHHHHhc------cCCc
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGY-----VE-L------S-KK------LSLPLGCTLDRYEGLVLSVG------GNGR  367 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~-----~~-i------~-~~------~~~p~g~v~D~~~gi~l~~~------~~Ge  367 (437)
                      ........+. ..+.++.++++...     .. +      . ..      ......+++|++++++.++.      ..|+
T Consensus       142 ~~~~~~~~~~-~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  220 (315)
T 2ydy_A          142 KAVLENNLGA-AVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKG  220 (315)
T ss_dssp             HHHHHHCTTC-EEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCE
T ss_pred             HHHHHhCCCe-EEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCC
Confidence            5443221111 11122222221110     00 0      0 00      00122379999999988773      3466


Q ss_pred             EEEEEccCCCCCCCCcHHHHHHHHHhhhCCce---ecccC-CCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          368 SYVLILEAGPSADRSQSKLYFARFSTKVGFCR---VRVPF-SSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       368 ~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~---v~iP~-~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      .|++  ..+.   .+++.|+++.+.+..|...   ..+|. .......+....+|.+|++.+  +|+|+.
T Consensus       221 ~~~i--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~--G~~p~~  283 (315)
T 2ydy_A          221 TFHW--SGNE---QMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETL--GIGQRT  283 (315)
T ss_dssp             EEEC--CCSC---CBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHT--TCCCCC
T ss_pred             eEEE--cCCC---cccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhc--CCCCCC
Confidence            6655  4432   4789999999999998532   12332 111122344568999999997  776653

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.86  E-value=1.1e-20  Score=187.93  Aligned_cols=259  Identities=16%  Similarity=0.089  Sum_probs=171.4

Q ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          156 IPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      .+++.+|+||||||+||||++|+++|+++|++|++++|+...  .....+  ...+.++.+|+.|.     ++.++|+||
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vi   96 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIY   96 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEE
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEE
Confidence            345678999999999999999999999999999999997531  111111  34689999999885     356899999


Q ss_pred             EeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhh
Q 013761          232 YCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       232 h~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      |+||....     .+...+++|+.|+.++++++.+.++++.++++. .|+...   ...+.+...  ....|..+...|+
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~---~~~~~E~~~--~~~~~~~~~~~Y~  171 (343)
T 2b69_A           97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPE---VHPQSEDYW--GHVNPIGPRACYD  171 (343)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCS---SSSBCTTCC--CBCCSSSTTHHHH
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCC---CCCCccccc--ccCCCCCCCCchH
Confidence            99997542     356789999999999999999998887777642 222110   011222211  0112333456789


Q ss_pred             hhhhhcccchhhhhcccccceeeeeeeccCccce----------e-c-----cccC--------CCcccHHHHHHHHHHH
Q 013761          306 AFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE----------L-S-----KKLS--------LPLGCTLDRYEGLVLS  361 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~----------i-~-----~~~~--------~p~g~v~D~~~gi~l~  361 (437)
                      .+|..++........+.+..+...++...||...          . .     ..+.        ....+++|++++++.+
T Consensus       172 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  251 (343)
T 2b69_A          172 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL  251 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHH
Confidence            9998888877655555566655555554444210          0 0     0110        0122899999999988


Q ss_pred             hcc-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          362 VGG-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       362 ~~~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +.. .++.|++  .++.   .+++.|+++.+.+.+|...  ..+|..   ...+....+|.+|+++. ++|+|+.
T Consensus       252 ~~~~~~~~~~i--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~p~~---~~~~~~~~~d~~k~~~~-lG~~p~~  317 (343)
T 2b69_A          252 MNSNVSSPVNL--GNPE---EHTILEFAQLIKNLVGSGSEIQFLSEA---QDDPQKRKPDIKKAKLM-LGWEPVV  317 (343)
T ss_dssp             HTSSCCSCEEE--SCCC---EEEHHHHHHHHHHHHTCCCCEEEECCC---TTCCCCCCBCCHHHHHH-HCCCCCS
T ss_pred             HhcCCCCeEEe--cCCC---CCcHHHHHHHHHHHhCCCCCceeCCCC---CCCCceecCCHHHHHHH-cCCCCCC
Confidence            853 4666766  4332   4789999999999998431  223322   23345567899999987 7888863

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.86  E-value=9.1e-21  Score=191.98  Aligned_cols=262  Identities=13%  Similarity=0.084  Sum_probs=168.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH------------------HHh----hCCCCeEEEEecCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE------------------VVD----MLPRSVEIVLGDVGD  216 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~------------------~~~----~~~~~v~~v~~Dltd  216 (437)
                      ..+++||||||+||||++|+++|+++|++|++++|.....                  ...    .....+.++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            4578999999999999999999999999999999864321                  010    113578899999999


Q ss_pred             HHHHHHHHhc--ccEEEEeccCCCCc-----h---hhHHHHHHHHHHHHHHHHHhcCC--ceeeeecCC-cchhhhhhhh
Q 013761          217 PCTLKAAVEN--CNKIIYCATARSTI-----T---GDLFRVDYQGVYNVTKAFQDFNN--KLAQLRAGK-SSKSKLLLAK  283 (437)
Q Consensus       217 ~~~v~~a~~~--~D~VIh~Ag~~~~~-----~---~~~~~vNv~gt~~l~~aa~~~gv--kl~~l~~~~-~g~sk~~~~k  283 (437)
                      .+++.+++++  +|+||||||.....     +   ...+++|+.|+.++++++.+.++  ++.++++.. |+...    .
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~----~  164 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN----I  164 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS----S
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC----C
Confidence            9999999998  89999999975421     1   24789999999999999999885  566665431 22111    0


Q ss_pred             hccCCCCc-------ceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce-----------------
Q 013761          284 FKSADSLN-------GWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-----------------  339 (437)
Q Consensus       284 ~v~~ssl~-------~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-----------------  339 (437)
                      .+.+....       .....|..+...|+.+|..++........+++..+...++...||...                 
T Consensus       165 ~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~  244 (404)
T 1i24_A          165 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA  244 (404)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred             CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence            11111000       000023345678999999888776655555565555555444443211                 


Q ss_pred             --------e------ccccC--------CCcccHHHHHHHHHHHhcc---CC--cEEEEEccCCCCCCCCcHHHHHHHHH
Q 013761          340 --------L------SKKLS--------LPLGCTLDRYEGLVLSVGG---NG--RSYVLILEAGPSADRSQSKLYFARFS  392 (437)
Q Consensus       340 --------i------~~~~~--------~p~g~v~D~~~gi~l~~~~---~G--e~y~l~l~~~~~~~~~s~~e~~~~i~  392 (437)
                              .      ...+.        ....|++|++++++.++..   .|  +.|++  ++.    .+++.|+++.+.
T Consensus       245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni--~~~----~~s~~e~~~~i~  318 (404)
T 1i24_A          245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQ--FTE----QFSVNELASLVT  318 (404)
T ss_dssp             TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEE--CSE----EEEHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEE--CCC----CCcHHHHHHHHH
Confidence                    0      00010        0113899999999998843   25  46655  432    478999999999


Q ss_pred             hh---hCCce--ecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          393 TK---VGFCR--VRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       393 ~~---~G~~~--v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +.   +|.+.  ..+|..... .......+|.+|++.  ++|+|+.
T Consensus       319 ~~~~~~g~~~~~~~~p~~~~~-~~~~~~~~d~~k~~~--LG~~p~~  361 (404)
T 1i24_A          319 KAGSKLGLDVKKMTVPNPRVE-AEEHYYNAKHTKLME--LGLEPHY  361 (404)
T ss_dssp             HHHHTTTCCCCEEEECCSSCS-CSSCCCCBCCCHHHH--TTCCCCC
T ss_pred             HHHHhhCCCccccccCcccCc-cccceEecCHHHHHH--cCCCcCc
Confidence            87   67421  223322110 122345679999984  6788764

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.86  E-value=7.4e-21  Score=184.51  Aligned_cols=240  Identities=12%  Similarity=0.101  Sum_probs=160.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~  237 (437)
                      .-++|||||||||||++|+++|+++|++|++++|+                .+|++|.+++.++++  ++|+||||||..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            45799999999999999999999999999999986                279999999999998  689999999976


Q ss_pred             CC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          238 ST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       238 ~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                      ..     .+.+.+++|+.|+.++++++.+.++++.++++. .|+...   ...+.+.       .|..+...|+.+|..+
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~---~~~~~E~-------~~~~~~~~Y~~sK~~~  144 (292)
T 1vl0_A           75 AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEA---KEPITEF-------DEVNPQSAYGKTKLEG  144 (292)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCC---SSCBCTT-------SCCCCCSHHHHHHHHH
T ss_pred             CHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCC---CCCCCCC-------CCCCCccHHHHHHHHH
Confidence            52     356789999999999999999988887776642 122110   0011121       1222345677777777


Q ss_pred             ccchhhhhcccccceeeeeeeccCc-cce-e------cccc------CCCcccHHHHHHHHHHHhc-cCCcEEEEEccCC
Q 013761          312 GMDAKFELSETGDAVFSGYVFTRGG-YVE-L------SKKL------SLPLGCTLDRYEGLVLSVG-GNGRSYVLILEAG  376 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~~~~~G-~~~-i------~~~~------~~p~g~v~D~~~gi~l~~~-~~Ge~y~l~l~~~  376 (437)
                      +........+ ...+.++.++++.. +.. .      ...+      .....+++|++++++.++. ..|+.|++  ..+
T Consensus       145 E~~~~~~~~~-~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i--~~~  221 (292)
T 1vl0_A          145 ENFVKALNPK-YYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHC--TCK  221 (292)
T ss_dssp             HHHHHHHCSS-EEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEEEEC--CCB
T ss_pred             HHHHHhhCCC-eEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcCCCcEEEe--cCC
Confidence            6655433221 11222222332200 000 0      0000      0112379999999998884 35666655  433


Q ss_pred             CCCCCCcHHHHHHHHHhhhCCc--eecccCCCcc--cCCCCCCCCCHHHHhhccceeecc
Q 013761          377 PSADRSQSKLYFARFSTKVGFC--RVRVPFSSFR--PVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       377 ~~~~~~s~~e~~~~i~~~~G~~--~v~iP~~~~r--~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      .   .+++.|+++.+.+.+|..  ...+|...+.  ...+....+|.+|+++. ++|+|+
T Consensus       222 ~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~  277 (292)
T 1vl0_A          222 G---ICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELT-TGDITR  277 (292)
T ss_dssp             S---CEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHT-TCCCCC
T ss_pred             C---CccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHH-cCCCCC
Confidence            2   478999999999999853  2235544332  22345568999999997 788886

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=3.7e-21  Score=190.63  Aligned_cols=261  Identities=15%  Similarity=0.116  Sum_probs=165.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH--HhhCC---CCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV--VDMLP---RSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~--~~~~~---~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      ++|+||||||+||||++|+++|+++|++|++++|+.+.  ..  +..+.   .++.++.+|++|.++++++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            56899999999999999999999999999999997652  11  11222   2588999999999999999999999999


Q ss_pred             eccCCCCc----hhhHHHHHHHHHHHHHHHHHhcC-Cc-eeeeecCC--cchhhhhhhhhccCCCCcce-eecc-Ccccc
Q 013761          233 CATARSTI----TGDLFRVDYQGVYNVTKAFQDFN-NK-LAQLRAGK--SSKSKLLLAKFKSADSLNGW-EVRQ-GTYFQ  302 (437)
Q Consensus       233 ~Ag~~~~~----~~~~~~vNv~gt~~l~~aa~~~g-vk-l~~l~~~~--~g~sk~~~~k~v~~ssl~~~-i~rP-~~~~~  302 (437)
                      +|+.....    ..+++++|+.|+.++++++.+.+ ++ +.++++..  ++....  ...+.+...... ...+ ..+..
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~--~~~~~E~~~~~~~~~~~~~~~~~  161 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ--LPVYDESCWSDMEFCRAKKMTAW  161 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCTTH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC--CcccCcccCCchhhhcccCCccc
Confidence            99865321    23589999999999999999887 54 55555422  111000  011222211000 0000 00234


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccce---ec------------cccCC------CcccHHHHHHHHHHH
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE---LS------------KKLSL------PLGCTLDRYEGLVLS  361 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~---i~------------~~~~~------p~g~v~D~~~gi~l~  361 (437)
                      .|+.+|..++.....+..+++..+...++++.||...   ..            ....+      ...|++|++++++.+
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHH
Confidence            6899999888877655555666666666655555221   00            00000      134899999999988


Q ss_pred             hcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCc-ccCCCCCCCCCHHHHhhccceeecc
Q 013761          362 VGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSF-RPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       362 ~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~-r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      +..  .++.|++  ..+    .++++|+++.+.+..+.  ..+|.... .+.......+|.+|++.  ++|+|+
T Consensus       242 ~~~~~~~~~~~~--~~~----~~s~~e~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~d~~k~~~--lG~~p~  305 (337)
T 2c29_D          242 FENPKAEGRYIC--SSH----DCIILDLAKMLREKYPE--YNIPTEFKGVDENLKSVCFSSKKLTD--LGFEFK  305 (337)
T ss_dssp             HHCTTCCEEEEE--CCE----EEEHHHHHHHHHHHCTT--SCCCSCCTTCCTTCCCCEECCHHHHH--HTCCCC
T ss_pred             hcCcccCceEEE--eCC----CCCHHHHHHHHHHHCCC--ccCCCCCCcccCCCccccccHHHHHH--cCCCcC
Confidence            843  2445643  222    36899999999987631  22332211 11223445689999954  577776

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=3.9e-21  Score=190.34  Aligned_cols=262  Identities=16%  Similarity=0.127  Sum_probs=163.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH----HHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ----EVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~----~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +|+||||||+||||++|+++|+++|++|++++|+.+.    .....+  ...+.++.+|++|.+++.++++++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            6899999999999999999999999999999987542    111111  2468899999999999999999999999999


Q ss_pred             cCCCCc---h-hhHHHHHHHHHHHHHHHHHhcC-Cc-eeeeecCC--cchhhhhhhhhccCCCCcce-eeccCcc-cchh
Q 013761          235 TARSTI---T-GDLFRVDYQGVYNVTKAFQDFN-NK-LAQLRAGK--SSKSKLLLAKFKSADSLNGW-EVRQGTY-FQDV  304 (437)
Q Consensus       235 g~~~~~---~-~~~~~vNv~gt~~l~~aa~~~g-vk-l~~l~~~~--~g~sk~~~~k~v~~ssl~~~-i~rP~~~-~~~y  304 (437)
                      |.....   + .+++++|+.|+.++++++.+++ ++ +.++++..  ++...+.....+.+...... ...|..+ ...|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            875321   2 3488999999999999999986 64 55555321  11100000012333321100 0011111 1258


Q ss_pred             hhhhhhcccchhhhhcccccceeeeeeeccCccce---ec-----------c-c--cC-----------CCcccHHHHHH
Q 013761          305 VAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE---LS-----------K-K--LS-----------LPLGCTLDRYE  356 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~---i~-----------~-~--~~-----------~p~g~v~D~~~  356 (437)
                      +.+|..++..+..+..+++..+...++++.||...   ..           . .  +.           .+..|++|+++
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~  248 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCR  248 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHH
Confidence            88898888776655555566666666655555211   00           0 0  00           02458999999


Q ss_pred             HHHHHhcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCc-ccCCCCCCCCCHHHHhhccceeeccc
Q 013761          357 GLVLSVGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSF-RPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       357 gi~l~~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~-r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +++.++..  .++.|++  ..+    .+++.|+++.+.+..+.  ..+|.... .+. .....+|.+|++.  ++|+|+.
T Consensus       249 a~~~~~~~~~~~~~~~~--~~~----~~s~~e~~~~l~~~~~~--~~~~~~~~~~~~-~~~~~~d~~k~~~--lG~~p~~  317 (338)
T 2rh8_A          249 AHIFVAEKESASGRYIC--CAA----NTSVPELAKFLSKRYPQ--YKVPTDFGDFPP-KSKLIISSEKLVK--EGFSFKY  317 (338)
T ss_dssp             HHHHHHHCTTCCEEEEE--CSE----EECHHHHHHHHHHHCTT--SCCCCCCTTSCS-SCSCCCCCHHHHH--HTCCCSC
T ss_pred             HHHHHHcCCCcCCcEEE--ecC----CCCHHHHHHHHHHhCCC--CCCCCCCCCCCc-CcceeechHHHHH--hCCCCCC
Confidence            99988843  2455644  322    36899999999887652  12332111 111 1236889999955  5777763

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.86  E-value=5.9e-21  Score=187.49  Aligned_cols=245  Identities=13%  Similarity=0.038  Sum_probs=165.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~  237 (437)
                      ++|+||||||+||||++|+++|+++|++|++++|+.               .+|++|.+++.++++  ++|+|||+||..
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~   66 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKV   66 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence            467999999999999999999999999999988753               279999999999999  899999999976


Q ss_pred             CC------chhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcc-cchhhhhh
Q 013761          238 ST------ITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTY-FQDVVAFK  308 (437)
Q Consensus       238 ~~------~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~-~~~y~~sk  308 (437)
                      ..      .+.+.+++|+.++.++++++++.++ ++.++++. .|+...   ...+.+.....   .+..+ ...|+.+|
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~---~~~~~E~~~~~---~~~~p~~~~Y~~sK  140 (321)
T 1e6u_A           67 GGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLA---KQPMAESELLQ---GTLEPTNEPYAIAK  140 (321)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTC---CSSBCGGGTTS---SCCCGGGHHHHHHH
T ss_pred             CCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCC---CCCcCcccccc---CCCCCCCCccHHHH
Confidence            42      3566899999999999999999988 46666542 222110   01122221100   02222 24788888


Q ss_pred             hhcccchhhhhcccccceeeeeeeccCccce------------ec-----------cccC-C-------CcccHHHHHHH
Q 013761          309 YDAGMDAKFELSETGDAVFSGYVFTRGGYVE------------LS-----------KKLS-L-------PLGCTLDRYEG  357 (437)
Q Consensus       309 ~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i~-----------~~~~-~-------p~g~v~D~~~g  357 (437)
                      ..++........+.+..+...++...||...            +.           ..+. +       ...|++|++++
T Consensus       141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~  220 (321)
T 1e6u_A          141 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  220 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHH
Confidence            8888776655544555555544444443211            00           0111 0       11289999999


Q ss_pred             HHHHhccC-----------CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhcc
Q 013761          358 LVLSVGGN-----------GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMT  426 (437)
Q Consensus       358 i~l~~~~~-----------Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~g  426 (437)
                      ++.++...           |+.|++  +++.   .+++.|+++.+.+.+|.. .++.+...++.......+|.+|+++  
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~--  292 (321)
T 1e6u_A          221 SIHVMELAHEVWLENTQPMLSHINV--GTGV---DCTIRELAQTIAKVVGYK-GRVVFDASKPDGTPRKLLDVTRLHQ--  292 (321)
T ss_dssp             HHHHHHSCHHHHHHTSBTTBCCEEE--SCSC---CEEHHHHHHHHHHHHTCC-SEEEEETTSCCCCSBCCBCCHHHHH--
T ss_pred             HHHHHhCcccccccccccCCceEEe--CCCC---CccHHHHHHHHHHHhCCC-CceEeCCCCCCCcccccCCHHHHHh--
Confidence            99988432           466766  4332   478999999999999853 2222222334445567899999998  


Q ss_pred             ceeeccc
Q 013761          427 IRFEPRR  433 (437)
Q Consensus       427 i~fep~~  433 (437)
                      ++|+|+.
T Consensus       293 lG~~p~~  299 (321)
T 1e6u_A          293 LGWYHEI  299 (321)
T ss_dssp             TTCCCCC
T ss_pred             cCCccCC
Confidence            6787763

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.86  E-value=1.6e-20  Score=187.72  Aligned_cols=255  Identities=11%  Similarity=0.041  Sum_probs=166.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh  232 (437)
                      +.+|+||||||+||||++|+++|+++| ++|++++|+........+. .+. +.+|++|.+.++++++     ++|+|||
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih  121 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH  121 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc-Cce-EeeecCcHHHHHHHHhhcccCCCCEEEE
Confidence            567899999999999999999999999 9999999976532122222 223 6799999999999998     4899999


Q ss_pred             eccCCCC---chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhh
Q 013761          233 CATARST---ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFK  308 (437)
Q Consensus       233 ~Ag~~~~---~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk  308 (437)
                      +||....   .+.+.+++|+.|+.++++++.+.++++.++++. .|+...   ...+.+.       .|..+...|+.+|
T Consensus       122 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~---~~~~~E~-------~~~~p~~~Y~~sK  191 (357)
T 2x6t_A          122 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRT---SDFIESR-------EYEKPLNVFGYSK  191 (357)
T ss_dssp             CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCS---SCCCSSG-------GGCCCSSHHHHHH
T ss_pred             CCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCC---CCCcCCc-------CCCCCCChhHHHH
Confidence            9997643   467789999999999999999988877776643 122110   0011111       1223456788888


Q ss_pred             hhcccchhhhhcccccceeeeeeeccCccce------------e----c--ccc---------CCCcccHHHHHHHHHHH
Q 013761          309 YDAGMDAKFELSETGDAVFSGYVFTRGGYVE------------L----S--KKL---------SLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       309 ~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i----~--~~~---------~~p~g~v~D~~~gi~l~  361 (437)
                      ..++........+.+..+...++...||...            .    .  ..+         .....+++|++++++.+
T Consensus       192 ~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~  271 (357)
T 2x6t_A          192 FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF  271 (357)
T ss_dssp             HHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHH
Confidence            8888777665555555544444444333210            0    0  000         11224899999999998


Q ss_pred             hcc-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCcee-cccCCCc-ccCCCCCCCCCHHHHhhcccee-ecc
Q 013761          362 VGG-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRV-RVPFSSF-RPVKPDDPPMDPFLVHTMTIRF-EPR  432 (437)
Q Consensus       362 ~~~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v-~iP~~~~-r~~~~~~~~ld~~ki~~~gi~f-ep~  432 (437)
                      +.. .|+.|++  .++.   .+++.|+++.+.+..|...+ .+|.... .........+|..|++.+  +| .|.
T Consensus       272 ~~~~~~~~~~i--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l--G~~~~~  339 (357)
T 2x6t_A          272 LENGVSGIFNL--GTGR---AESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAA--GYDKPF  339 (357)
T ss_dssp             HHHCCCEEEEE--SCSC---CEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHT--TCCCCC
T ss_pred             HhcCCCCeEEe--cCCC---cccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHc--CCCCCC
Confidence            842 3677766  4332   47899999999999985411 1332221 111234467899999884  66 443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.85  E-value=7.6e-21  Score=184.83  Aligned_cols=241  Identities=13%  Similarity=0.077  Sum_probs=159.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCC-
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARS-  238 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~-  238 (437)
                      |+||||||+||||++|+++|+ +|++|++++|+..            ++.+|++|.+++.+++++  +|+|||+||... 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            479999999999999999999 8999999999752            246899999999999987  899999999754 


Q ss_pred             ----CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          239 ----TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       239 ----~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                          ..+.+.+++|+.|+.++++++++.++++.++++. .|+...   ...+.+.       .|..+.+.|+.+|..++.
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~---~~~~~E~-------~~~~p~~~Y~~sK~~~E~  137 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTG---DIPWQET-------DATSPLNVYGKTKLAGEK  137 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCT---TCCBCTT-------SCCCCSSHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCC---CCCCCCC-------CCCCCccHHHHHHHHHHH
Confidence                2356789999999999999999988887777643 222111   0112222       122345678888877776


Q ss_pred             chhhhhcccccceeeeeeeccCc--cce-ec------ccc------CCCcccHHHHHHHHHHHhcc------CCcEEEEE
Q 013761          314 DAKFELSETGDAVFSGYVFTRGG--YVE-LS------KKL------SLPLGCTLDRYEGLVLSVGG------NGRSYVLI  372 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G--~~~-i~------~~~------~~p~g~v~D~~~gi~l~~~~------~Ge~y~l~  372 (437)
                      ....... ....+.++.+++++.  +.. ..      ..+      .....|++|++++++.++..      .++.|++ 
T Consensus       138 ~~~~~~~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i-  215 (299)
T 1n2s_A          138 ALQDNCP-KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHL-  215 (299)
T ss_dssp             HHHHHCS-SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEEC-
T ss_pred             HHHHhCC-CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEE-
Confidence            6543322 111223333333321  000 00      000      01123799999999988842      2677755 


Q ss_pred             ccCCCCCCCCcHHHHHHHHHhhhCCce-------e-cccCCCc--ccCCCCCCCCCHHHHhhccceeecc
Q 013761          373 LEAGPSADRSQSKLYFARFSTKVGFCR-------V-RVPFSSF--RPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       373 l~~~~~~~~~s~~e~~~~i~~~~G~~~-------v-~iP~~~~--r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                       ..+.   .+++.|+++.+.+.+|...       + .+|...+  ....+....+|.+|+++. ++|+|+
T Consensus       216 -~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~  280 (299)
T 1n2s_A          216 -VAGG---TTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRN-FDLILP  280 (299)
T ss_dssp             -CCBS---CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHH-HTCCCC
T ss_pred             -eCCC---CCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHh-cCCCCC
Confidence             4332   4789999999999988431       1 1232222  112244568999999987 778775

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.84  E-value=7.8e-21  Score=185.91  Aligned_cols=243  Identities=14%  Similarity=0.034  Sum_probs=161.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-----HHHhh--CCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-----EVVDM--LPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-----~~~~~--~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      +++|+|||||||||||++|+++|+++|++|++++|+...     .....  ....+.++.+|++          ++|+||
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi   74 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVY   74 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEE
Confidence            567899999999999999999999999999999997651     00111  0124555566655          789999


Q ss_pred             EeccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          232 YCATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       232 h~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      |+||....     .+...++ |+.++.++++++++.+++ +.++++. .|+...   ...+.+.       .|..+...|
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~---~~~~~E~-------~~~~p~~~Y  143 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQAD---TLPTPED-------SPLSPRSPY  143 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCS---SSSBCTT-------SCCCCCSHH
T ss_pred             ECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCC---CCCCCCC-------CCCCCCChh
Confidence            99997642     2455777 999999999999999974 6665542 222110   0111221       233345778


Q ss_pred             hhhhhhcccchhhhhccccc-ceeeeeeeccCcccee--------c------cccC--------CCcccHHHHHHHHHHH
Q 013761          305 VAFKYDAGMDAKFELSETGD-AVFSGYVFTRGGYVEL--------S------KKLS--------LPLGCTLDRYEGLVLS  361 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~-~v~~g~~~~~~G~~~i--------~------~~~~--------~p~g~v~D~~~gi~l~  361 (437)
                      +.+|..++........+.+. .+...++...||....        .      ..+.        ....+++|++++++.+
T Consensus       144 ~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~  223 (321)
T 3vps_A          144 AASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL  223 (321)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHH
Confidence            88998888877766666666 5555555554442110        0      0010        1123899999999999


Q ss_pred             hcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeec
Q 013761          362 VGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEP  431 (437)
Q Consensus       362 ~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep  431 (437)
                      +..  .| .|++  ..+.   .+++.|+++.+. .+|.. +++.....++.......+|.+|++.. ++|+|
T Consensus       224 ~~~~~~g-~~~i--~~~~---~~s~~e~~~~i~-~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p  286 (321)
T 3vps_A          224 ANRPLPS-VVNF--GSGQ---SLSVNDVIRILQ-ATSPA-AEVARKQPRPNEITEFRADTALQTRQ-IGERS  286 (321)
T ss_dssp             GGSCCCS-EEEE--SCSC---CEEHHHHHHHHH-TTCTT-CEEEEECCCTTCCSBCCBCCHHHHHH-HCCCS
T ss_pred             HhcCCCC-eEEe--cCCC---cccHHHHHHHHH-HhCCC-CccccCCCCCCCcceeeccHHHHHHH-hCCCC
Confidence            843  35 5555  5443   578999999999 98843 22222233445566789999999997 78888

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.84  E-value=1.1e-20  Score=187.49  Aligned_cols=256  Identities=13%  Similarity=0.014  Sum_probs=167.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-cccEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-------YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-NCNKI  230 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-~~D~V  230 (437)
                      |++|+||||||+||||++|+++|+++|       ++|++++|+.+... ......+.++.+|++|.++++++++ ++|+|
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v   90 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-AGFSGAVDARAADLSAPGEAEKLVEARPDVI   90 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC-TTCCSEEEEEECCTTSTTHHHHHHHTCCSEE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc-cccCCceeEEEcCCCCHHHHHHHHhcCCCEE
Confidence            678899999999999999999999999       89999999764211 1123468899999999999999995 89999


Q ss_pred             EEeccCCCC----chhhHHHHHHHHHHHHHHHHHhcC-----C-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCc
Q 013761          231 IYCATARST----ITGDLFRVDYQGVYNVTKAFQDFN-----N-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       231 Ih~Ag~~~~----~~~~~~~vNv~gt~~l~~aa~~~g-----v-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      |||||....    .+.+.+++|+.|+.++++++.+.+     + ++.++++. .|+...   ...+.+.       .|..
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~---~~~~~E~-------~~~~  160 (342)
T 2hrz_A           91 FHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPL---PYPIPDE-------FHTT  160 (342)
T ss_dssp             EECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSC---CSSBCTT-------CCCC
T ss_pred             EECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCC---CCCcCCC-------CCCC
Confidence            999997642    356789999999999999998876     4 46665542 222110   0112222       1222


Q ss_pred             ccchhhhhhhhcccchhhhhcccccceeeeeeeccCc-cce------------e-----ccccCCC--------cccHHH
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGG-YVE------------L-----SKKLSLP--------LGCTLD  353 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G-~~~------------i-----~~~~~~p--------~g~v~D  353 (437)
                      +...|+.+|..++........+.+......++...+| ...            +     ...+.++        ..+++|
T Consensus       161 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  240 (342)
T 2hrz_A          161 PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRS  240 (342)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHH
Confidence            4578999999888877655554444333334333222 000            0     0000011        237999


Q ss_pred             HHHHHHHHhcc------CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCcee-cccCCCccc----CCCCCCCCCHHHH
Q 013761          354 RYEGLVLSVGG------NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRV-RVPFSSFRP----VKPDDPPMDPFLV  422 (437)
Q Consensus       354 ~~~gi~l~~~~------~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v-~iP~~~~r~----~~~~~~~ld~~ki  422 (437)
                      ++++++.++..      .++.|++  . +.   .++++|+++.+.+.+|.... .+.+.....    .......+|.+|+
T Consensus       241 va~~~~~~~~~~~~~~~~~~~~ni--~-g~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  314 (342)
T 2hrz_A          241 AVGFLIHGAMIDVEKVGPRRNLSM--P-GL---SATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRA  314 (342)
T ss_dssp             HHHHHHHHHHSCHHHHCSCCEEEC--C-CE---EEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHH
T ss_pred             HHHHHHHHHhccccccCCccEEEc--C-CC---CCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHH
Confidence            99999988742      3566655  3 22   47899999999999984321 121111100    0111225899999


Q ss_pred             hhccceeeccc
Q 013761          423 HTMTIRFEPRR  433 (437)
Q Consensus       423 ~~~gi~fep~~  433 (437)
                      ++  ++|+|+.
T Consensus       315 ~~--lG~~p~~  323 (342)
T 2hrz_A          315 RE--LGFTAES  323 (342)
T ss_dssp             HH--TTCCCCS
T ss_pred             HH--cCCCCCC
Confidence            88  6777753

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=4e-20  Score=172.81  Aligned_cols=202  Identities=9%  Similarity=0.029  Sum_probs=136.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      +|+||||||+|+||++|+++|+++|++|++++|+.+.  ...+...+.++.+|++|.+++.++++++|+|||+||.....
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK--IKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN   81 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG--CCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc--chhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence            4799999999999999999999999999999998653  12234689999999999999999999999999999876433


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhh
Q 013761          241 TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       241 ~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                       .+.+++|+.++.++++++++.+++ +.++++.. ++....   ... +       -.|..+...|+.+|...+......
T Consensus        82 -~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~---~~~-~-------~~~~~p~~~Y~~sK~~~e~~~~~~  149 (227)
T 3dhn_A           82 -PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG---LRL-M-------DSGEVPENILPGVKALGEFYLNFL  149 (227)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT---EEG-G-------GTTCSCGGGHHHHHHHHHHHHHTG
T ss_pred             -hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC---Ccc-c-------cCCcchHHHHHHHHHHHHHHHHHH
Confidence             337889999999999999999984 66655422 111000   000 0       112233456777777776554444


Q ss_pred             hcccccceeeeeeeccCccce------eccccC------CCcccHHHHHHHHHHHhc---cCCcEEEEEccCC
Q 013761          319 LSETGDAVFSGYVFTRGGYVE------LSKKLS------LPLGCTLDRYEGLVLSVG---GNGRSYVLILEAG  376 (437)
Q Consensus       319 ~~~~~~~v~~g~~~~~~G~~~------i~~~~~------~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l~~~  376 (437)
                      ..+.+..+...++...||...      ......      ....+++|++++++.++.   ..|++|.+.....
T Consensus       150 ~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~  222 (227)
T 3dhn_A          150 MKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEH  222 (227)
T ss_dssp             GGCCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSC
T ss_pred             hhccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehh
Confidence            444555444444443333111      011111      112389999999999984   3588998865544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.84  E-value=8.5e-20  Score=174.87  Aligned_cols=237  Identities=11%  Similarity=0.028  Sum_probs=154.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~~  239 (437)
                      |+||||||+||||++++++|+ +|++|++++|+....      .+   +.+|++|.+++.+++++  +|+||||||....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            479999999999999999999 599999999986421      12   78999999999999987  8999999997653


Q ss_pred             -----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          240 -----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       240 -----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                           .+++.+++|+.++.++++++.+.++++.++++.. ++...    ..+.+.       .|..+...|+.+|...+.
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~----~~~~e~-------~~~~~~~~Y~~sK~~~e~  139 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEK----GNYKEE-------DIPNPINYYGLSKLLGET  139 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSS----CSBCTT-------SCCCCSSHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCC----CCcCCC-------CCCCCCCHHHHHHHHHHH
Confidence                 3567899999999999999999888877665421 11000    011111       111123455666655544


Q ss_pred             chhhhhcccccceeeeeeeccCc---cce-e----c--ccc-----CCCcccHHHHHHHHHHHhc-cCCcEEEEEccCCC
Q 013761          314 DAKFELSETGDAVFSGYVFTRGG---YVE-L----S--KKL-----SLPLGCTLDRYEGLVLSVG-GNGRSYVLILEAGP  377 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G---~~~-i----~--~~~-----~~p~g~v~D~~~gi~l~~~-~~Ge~y~l~l~~~~  377 (437)
                      ....      ......++...||   +.. +    .  ..+     .....+++|++++++..+. ..++.|++  .. .
T Consensus       140 ~~~~------~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~g~~~i--~~-~  210 (273)
T 2ggs_A          140 FALQ------DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRKTGIIHV--AG-E  210 (273)
T ss_dssp             HHCC------TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTCCEEEEC--CC-C
T ss_pred             HHhC------CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCcCCeEEE--CC-C
Confidence            4332      1112222222222   000 0    0  000     1123479999999998884 33445544  43 2


Q ss_pred             CCCCCcHHHHHHHHHhhhCCce-ecccCC--CcccCCCCCCCCCHHHHhhccceeecc
Q 013761          378 SADRSQSKLYFARFSTKVGFCR-VRVPFS--SFRPVKPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       378 ~~~~~s~~e~~~~i~~~~G~~~-v~iP~~--~~r~~~~~~~~ld~~ki~~~gi~fep~  432 (437)
                         .+++.|+++.+.+.+|.+. +..|..  .+.+..+....+|.+|+++. ++|+|+
T Consensus       211 ---~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~  264 (273)
T 2ggs_A          211 ---RISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKI-LSTDFY  264 (273)
T ss_dssp             ---CEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHH-CSSCCC
T ss_pred             ---cccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHH-hCCCCC
Confidence               5789999999999998532 112211  22333455678999999997 788884

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.84  E-value=1.4e-20  Score=184.36  Aligned_cols=247  Identities=16%  Similarity=0.105  Sum_probs=167.4

Q ss_pred             EEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccCCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATARS  238 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~~~  238 (437)
                      +||||||+||||++|+++|+++  |++|++++|+....      ..+.++.+|++|.+++.++++  ++|+|||+||...
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------cCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            4899999999999999999998  89999999875421      146788999999999999998  7899999999753


Q ss_pred             C----chhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          239 T----ITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       239 ~----~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                      .    .+...+++|+.|+.++++++++.++ ++.++++. .|+....  ...+.+.       .|..+...|+.+|..++
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~-------~~~~p~~~Y~~sK~~~e  145 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETP--KNKVPSI-------TITRPRTMFGVTKIAAE  145 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSC--SSSBCSS-------SCCCCCSHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCC--CCCcccc-------ccCCCCchHHHHHHHHH
Confidence            2    3567899999999999999999988 46666542 2221100  0011111       12234678999999888


Q ss_pred             cchhhhhcccccceeeeeeeccCccc------------e-----ec-ccc--------CCCcccHHHHHHHHHHHhcc--
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGYV------------E-----LS-KKL--------SLPLGCTLDRYEGLVLSVGG--  364 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~~------------~-----i~-~~~--------~~p~g~v~D~~~gi~l~~~~--  364 (437)
                      ........+++..+...++.+.||..            .     .. ..+        ..+..|++|++++++.++..  
T Consensus       146 ~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  225 (317)
T 3ajr_A          146 LLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADR  225 (317)
T ss_dssp             HHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCc
Confidence            87766555566665555554444310            0     00 000        01112899999999988842  


Q ss_pred             ----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCc-cc--CCCCCCCCCHHHHhhccceeeccc
Q 013761          365 ----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSF-RP--VKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       365 ----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~-r~--~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                          .|+.|++  +.+    .+++.|+++.+.+..|.  ..+++... +.  .......+|.+|++.. ++|+|+.
T Consensus       226 ~~~~~g~~~~i--~~~----~~s~~e~~~~i~~~~~~--~~i~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  292 (317)
T 3ajr_A          226 DKLVLRNGYNV--TAY----TFTPSELYSKIKERIPE--FEIEYKEDFRDKIAATWPESLDSSEASNE-WGFSIEY  292 (317)
T ss_dssp             GGCSSCSCEEC--CSE----EECHHHHHHHHHTTCCS--CCEEECCCHHHHHHTTSCSCBCCHHHHHH-HCCCCCC
T ss_pred             cccccCceEec--CCc----cccHHHHHHHHHHHCCc--cccccccccchhhccccccccCHHHHHHH-cCCCCCC
Confidence                2467766  322    36899999999998872  23333221 11  0122346899999987 7888864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.84  E-value=3.1e-20  Score=182.16  Aligned_cols=260  Identities=18%  Similarity=0.165  Sum_probs=159.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEec-CCcH----HHHhhCC---CCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQ----EVVDMLP---RSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R-~~~~----~~~~~~~---~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +|+||||||+||||++|+++|+++|++|++++| +.+.    .....+.   ..+.++.+|++|.++++++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            579999999999999999999999999999998 5421    1112222   2578899999999999999999999999


Q ss_pred             eccCCCCc----hhhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecCC--cchhhhhhhhhccCCCCcce-eeccCcccc-
Q 013761          233 CATARSTI----TGDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAGK--SSKSKLLLAKFKSADSLNGW-EVRQGTYFQ-  302 (437)
Q Consensus       233 ~Ag~~~~~----~~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~~--~g~sk~~~~k~v~~ssl~~~-i~rP~~~~~-  302 (437)
                      +|+.....    ..+++++|+.|+.++++++.+. +++ +.++++..  ++....  ...+.+...... ...|..+.. 
T Consensus        81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~p~~~  158 (322)
T 2p4h_X           81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLRSVKPFGW  158 (322)
T ss_dssp             CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCTTH
T ss_pred             cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC--CeecCCccccchhhhcccCcccc
Confidence            99754211    2448999999999999999887 664 55555421  110000  011222211000 000101112 


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccce---e-----------c-cccCC-----CcccHHHHHHHHHHHh
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE---L-----------S-KKLSL-----PLGCTLDRYEGLVLSV  362 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~---i-----------~-~~~~~-----p~g~v~D~~~gi~l~~  362 (437)
                      .|+.+|..++.....+..+++..+...++...||...   .           . ....+     ...+++|++++++.++
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHh
Confidence            5888898877776555444565555555544444210   0           0 00011     2358999999999888


Q ss_pred             ccC--CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCC-cccC-CCCCCCCCHHHHhhccceeecc
Q 013761          363 GGN--GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSS-FRPV-KPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       363 ~~~--Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~-~r~~-~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      ...  ...|+  +. +.   .+++.|+++.+.+..+  ...+|... +... ......+|.+|++.  ++|+|+
T Consensus       239 ~~~~~~g~~~--~~-~~---~~s~~e~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~k~~~--lG~~p~  302 (322)
T 2p4h_X          239 ENSVPGGRYN--CS-PF---IVPIEEMSQLLSAKYP--EYQILTVDELKEIKGARLPDLNTKKLVD--AGFDFK  302 (322)
T ss_dssp             HSCCCCEEEE--CC-CE---EEEHHHHHHHHHHHCT--TSCCCCTTTTTTCCCEECCEECCHHHHH--TTCCCC
T ss_pred             hCcCCCCCEE--Ec-CC---CCCHHHHHHHHHHhCC--CCCCCCCccccCCCCCcceecccHHHHH--hCCccC
Confidence            432  22354  32 22   4789999999987654  12344321 1111 11346789999955  577776

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=1.2e-19  Score=197.78  Aligned_cols=261  Identities=13%  Similarity=0.095  Sum_probs=168.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---Hhh-CCCCeEEEEecCCCHHHHHHHHh--cccEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDM-LPRSVEIVLGDVGDPCTLKAAVE--NCNKI  230 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~-~~~~v~~v~~Dltd~~~v~~a~~--~~D~V  230 (437)
                      +++|+||||||+||||++|+++|+++|++|++++|+...  ..   +.. ....+.++.+|++|.++++++++  ++|+|
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            567899999999999999999999999999999997541  11   111 13568899999999999999998  78999


Q ss_pred             EEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-Ccchhhhhh-hhhccCCCCcceeeccCcccc
Q 013761          231 IYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLL-AKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       231 Ih~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~-~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ||+||.....     ..+.+++|+.|+.++++++++.+++ +.++++. .|+...... ...+.+.       .|..+..
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~-------~~~~p~~  161 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-------CPLGPTN  161 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-------SCCCCCS
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCcccc-------CCCCCCC
Confidence            9999976421     3568999999999999999998875 6666542 222110000 0011111       1222456


Q ss_pred             hhhhhhhhcccchhhhhcc--cccceeeeeeeccCccc--------------e----e-----cc--ccCC---------
Q 013761          303 DVVAFKYDAGMDAKFELSE--TGDAVFSGYVFTRGGYV--------------E----L-----SK--KLSL---------  346 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~--~~~~v~~g~~~~~~G~~--------------~----i-----~~--~~~~---------  346 (437)
                      .|+.+|..++........+  .+..+...|+++.||..              .    +     ..  .+..         
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  241 (699)
T 1z45_A          162 PYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD  241 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CC
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCC
Confidence            7888888887766544333  45555555554443310              0    0     00  1111         


Q ss_pred             -----CcccHHHHHHHHHHHhcc-------C--CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCC
Q 013761          347 -----PLGCTLDRYEGLVLSVGG-------N--GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKP  412 (437)
Q Consensus       347 -----p~g~v~D~~~gi~l~~~~-------~--Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~  412 (437)
                           ...|++|++++++.++..       .  ++.|++  +++.   .+++.|+++.+.+..|.. +.+.+...++.+.
T Consensus       242 g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni--~~~~---~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~  315 (699)
T 1z45_A          242 GTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNL--GSGK---GSTVFEVYHAFCKASGID-LPYKVTGRRAGDV  315 (699)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEE--SCSC---CEEHHHHHHHHHHHHTCC-CCC---------C
T ss_pred             CCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEE--CCCC---CCcHHHHHHHHHHHhCCC-CCceecCCCCCcc
Confidence                 112899999999988731       2  244544  5443   478999999999999852 2222222334445


Q ss_pred             CCCCCCHHHHhhccceeeccc
Q 013761          413 DDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       413 ~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ....+|.+|+++. ++|+|+.
T Consensus       316 ~~~~~d~~ka~~~-LG~~p~~  335 (699)
T 1z45_A          316 LNLTAKPDRAKRE-LKWQTEL  335 (699)
T ss_dssp             CCCCBCCHHHHHH-TCCCCCC
T ss_pred             ccccCCHHHHHHh-cCCCCCC
Confidence            5678999999987 7888864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.83  E-value=8.3e-20  Score=198.13  Aligned_cols=266  Identities=14%  Similarity=0.056  Sum_probs=173.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHH-HHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCT-LKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~-v~~a~~~~D~VIh~Ag~  236 (437)
                      +++|+||||||+||||++|+++|+++ |++|++++|+...........++.++.+|++|.++ ++++++++|+|||+||.
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~  392 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI  392 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence            56789999999999999999999998 89999999986531111113478999999999765 88899999999999997


Q ss_pred             CCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccC-cccchhhhhhh
Q 013761          237 RST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQG-TYFQDVVAFKY  309 (437)
Q Consensus       237 ~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~-~~~~~y~~sk~  309 (437)
                      ...     .+.+.+++|+.|+.++++++.+.+.++.++++. .|+...   ...+.+.... ....|. .+.+.|+.+|.
T Consensus       393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~---~~~~~E~~~~-~~~~p~~~p~~~Y~~sK~  468 (660)
T 1z7e_A          393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCS---DKYFDEDHSN-LIVGPVNKPRWIYSVSKQ  468 (660)
T ss_dssp             CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCC---SSSBCTTTCC-EEECCTTCTTHHHHHHHH
T ss_pred             cCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCC---CcccCCCccc-cccCcccCCCCCcHHHHH
Confidence            653     245689999999999999999988556666642 222110   0112222111 011111 23456888888


Q ss_pred             hcccchhhhhcccccceeeeeeeccCccce----------------ec------cccC--------CCcccHHHHHHHHH
Q 013761          310 DAGMDAKFELSETGDAVFSGYVFTRGGYVE----------------LS------KKLS--------LPLGCTLDRYEGLV  359 (437)
Q Consensus       310 a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~----------------i~------~~~~--------~p~g~v~D~~~gi~  359 (437)
                      .++........+.+..+...+....||...                ..      ..+.        ....+++|++++++
T Consensus       469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~  548 (660)
T 1z7e_A          469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  548 (660)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHH
Confidence            888776655555565555555554444211                00      0000        01237999999999


Q ss_pred             HHhcc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCCc-c-----------cCCCCCCCCCHH
Q 013761          360 LSVGG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSSF-R-----------PVKPDDPPMDPF  420 (437)
Q Consensus       360 l~~~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~-r-----------~~~~~~~~ld~~  420 (437)
                      .++..     .|+.|++..+.    ..+++.|+++.+.+..|...  +.+|.... +           ........+|.+
T Consensus       549 ~~l~~~~~~~~g~~~ni~~~~----~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  624 (660)
T 1z7e_A          549 RIIENAGNRCDGEIINIGNPE----NEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR  624 (660)
T ss_dssp             HHHHCGGGTTTTEEEEECCGG----GEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCH
T ss_pred             HHHhCccccCCCeEEEECCCC----CCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCHH
Confidence            88732     46777663221    13689999999999987322  22332210 0           012345678999


Q ss_pred             HHhhccceeeccc
Q 013761          421 LVHTMTIRFEPRR  433 (437)
Q Consensus       421 ki~~~gi~fep~~  433 (437)
                      |+++. ++|+|+.
T Consensus       625 ka~~~-LG~~p~~  636 (660)
T 1z7e_A          625 NAHRC-LDWEPKI  636 (660)
T ss_dssp             HHHHH-HCCCCCC
T ss_pred             HHHHh-cCCCccC
Confidence            99987 7888864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.83  E-value=3.7e-20  Score=182.72  Aligned_cols=258  Identities=15%  Similarity=0.047  Sum_probs=164.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhh----CCCCeEEE-EecCCCHHHHHHHHhcccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDM----LPRSVEIV-LGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~----~~~~v~~v-~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      +++|+||||||+||||++|+++|+++|++|++++|+.+..  ....    .+..+.++ .+|++|.++++++++++|+||
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            5788999999999999999999999999999999975421  1111    13578888 799999999999999999999


Q ss_pred             EeccCCCC--chhhHHHHHHHHHHHHHHHHHh-cCC-ceeeeecC-Ccchhhhhh-hhhccCCCCcce---------eec
Q 013761          232 YCATARST--ITGDLFRVDYQGVYNVTKAFQD-FNN-KLAQLRAG-KSSKSKLLL-AKFKSADSLNGW---------EVR  296 (437)
Q Consensus       232 h~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~-~gv-kl~~l~~~-~~g~sk~~~-~k~v~~ssl~~~---------i~r  296 (437)
                      ||||....  .+.+.+++|+.|+.++++++.+ .++ ++.++++. .++...... ...+.+......         ...
T Consensus        89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  168 (342)
T 1y1p_A           89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD  168 (342)
T ss_dssp             ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred             EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccc
Confidence            99997643  4677999999999999999985 555 46666542 221110000 011222211000         001


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc--ccce---eeeeeeccCccce----e----c------ccc-------CCCccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET--GDAV---FSGYVFTRGGYVE----L----S------KKL-------SLPLGC  350 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~--~~~v---~~g~~~~~~G~~~----i----~------~~~-------~~p~g~  350 (437)
                      |..+...|+.+|...+........++  +..+   .++.++++.....    .    .      ...       .....|
T Consensus       169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  248 (342)
T 1y1p_A          169 PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVS  248 (342)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEE
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeE
Confidence            22245679999999988876655543  3333   3333444321100    0    0      000       011238


Q ss_pred             HHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhc
Q 013761          351 TLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTM  425 (437)
Q Consensus       351 v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~  425 (437)
                      ++|++++++.++..   .|+.+ ++.+  .   .+++.|+++.+.+..|..  .+|... .+.......+|.+|++++
T Consensus       249 v~Dva~a~~~~~~~~~~~g~~~-~~~g--~---~~s~~e~~~~i~~~~~~~--~~~~~~-~~~~~~~~~~d~~k~~~~  317 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQIERRRV-YGTA--G---TFDWNTVLATFRKLYPSK--TFPADF-PDQGQDLSKFDTAPSLEI  317 (342)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEE-EECC--E---EECHHHHHHHHHHHCTTS--CCCCCC-CCCCCCCCEECCHHHHHH
T ss_pred             HHHHHHHHHHHHcCcccCCceE-EEeC--C---CCCHHHHHHHHHHHCCCc--cCCCCC-CccccccccCChHHHHHH
Confidence            99999999988842   35544 3322  1   368999999999998853  233221 111223467899999875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.83  E-value=1.1e-19  Score=177.19  Aligned_cols=251  Identities=12%  Similarity=0.043  Sum_probs=155.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-----ccEEEEeccC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-----CNKIIYCATA  236 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-----~D~VIh~Ag~  236 (437)
                      +||||||+||||++|+++|+++| ++|++++|+........+. .+. +.+|++|.+.+++++++     +|+|||+||.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-cce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            48999999999999999999999 9999999976532111111 122 67899999999999986     8999999997


Q ss_pred             CCC---chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          237 RST---ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       237 ~~~---~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                      ...   .+...+++|+.|+.++++++.+.++++.++++. .|+....   ..+.+.       .|..+...|+.+|..++
T Consensus        79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~---~~~~E~-------~~~~p~~~Y~~sK~~~e  148 (310)
T 1eq2_A           79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTS---DFIESR-------EYEKPLNVYGYSKFLFD  148 (310)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCS---CBCSSG-------GGCCCSSHHHHHHHHHH
T ss_pred             ccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCC---CCCCCC-------CCCCCCChhHHHHHHHH
Confidence            643   366789999999999999999988877766643 1221100   011111       12234567888888877


Q ss_pred             cchhhhhcccccceeeeeeeccCccce------------e------cccc---------CCCcccHHHHHHHHHHHhc-c
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGYVE------------L------SKKL---------SLPLGCTLDRYEGLVLSVG-G  364 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i------~~~~---------~~p~g~v~D~~~gi~l~~~-~  364 (437)
                      ........+.+..+...++...||...            +      ...+         .....|++|++++++.++. .
T Consensus       149 ~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~  228 (310)
T 1eq2_A          149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG  228 (310)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC
Confidence            776655555555544444443333110            0      0000         1122479999999998884 2


Q ss_pred             CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceec-ccCCCc-ccCCCCCCCCCHHHHhhcccee-ecc
Q 013761          365 NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVR-VPFSSF-RPVKPDDPPMDPFLVHTMTIRF-EPR  432 (437)
Q Consensus       365 ~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~-iP~~~~-r~~~~~~~~ld~~ki~~~gi~f-ep~  432 (437)
                      .++.|++  .++.   .+++.|+++.+.+.+|...++ +|.... .........+|..|++.+  +| .|.
T Consensus       229 ~~~~~~i--~~~~---~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--G~~~~~  292 (310)
T 1eq2_A          229 VSGIFNL--GTGR---AESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAA--GYDKPF  292 (310)
T ss_dssp             CCEEEEE--SCSC---CBCHHHHHHHC---------------------CCCSCCBCCHHHHHT--TCCCCC
T ss_pred             CCCeEEE--eCCC---ccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhc--CCCCCC
Confidence            3677766  4332   478999999999998853111 222221 111234467899999874  66 443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.82  E-value=1.4e-19  Score=174.88  Aligned_cols=241  Identities=12%  Similarity=0.054  Sum_probs=155.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +|+|+|||||| ||||++|+++|+++|++|++++|+..... ......++++.+|++|.+     ++++|+|||+|+...
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-AIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDS   75 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-HHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBT
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-hHhhCCCeEEEecccccc-----cCCCCEEEECCCccc
Confidence            45689999998 99999999999999999999999876311 111247899999999954     788999999999765


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHh--cCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQD--FNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~--~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                      .. .       ..+.++++++++  .+++ +.++++. .|+...   ...+.+.       .|..+.+.|+.+|..++..
T Consensus        76 ~~-~-------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~---~~~~~E~-------~~~~p~~~Y~~sK~~~E~~  137 (286)
T 3ius_A           76 GG-D-------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHD---GAWVDET-------TPLTPTAARGRWRVMAEQQ  137 (286)
T ss_dssp             TB-C-------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCT---TCEECTT-------SCCCCCSHHHHHHHHHHHH
T ss_pred             cc-c-------HHHHHHHHHHHhhcCCceEEEEeecceecCCCC---CCCcCCC-------CCCCCCCHHHHHHHHHHHH
Confidence            32 1       124678888888  5664 5555532 222110   0112222       1223446788888877766


Q ss_pred             hhhhhcccccceeeeeeeccCccce-----eccc---------cCCCcccHHHHHHHHHHHhc--cCCcEEEEEccCCCC
Q 013761          315 AKFELSETGDAVFSGYVFTRGGYVE-----LSKK---------LSLPLGCTLDRYEGLVLSVG--GNGRSYVLILEAGPS  378 (437)
Q Consensus       315 ~~~~~~~~~~~v~~g~~~~~~G~~~-----i~~~---------~~~p~g~v~D~~~gi~l~~~--~~Ge~y~l~l~~~~~  378 (437)
                      ....   .+..+...++...||...     +...         -.....|++|++++++.++.  ..|+.|++  .++. 
T Consensus       138 ~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i--~~~~-  211 (286)
T 3ius_A          138 WQAV---PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNV--CDDE-  211 (286)
T ss_dssp             HHHS---TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEE--CCSC-
T ss_pred             HHhh---cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEE--eCCC-
Confidence            5444   344444444444444211     0000         01122389999999999984  35677876  3332 


Q ss_pred             CCCCcHHHHHHHHHhhhCCc-eecccCCCcccCC------CCCCCCCHHHHhhccceeeccc
Q 013761          379 ADRSQSKLYFARFSTKVGFC-RVRVPFSSFRPVK------PDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       379 ~~~~s~~e~~~~i~~~~G~~-~v~iP~~~~r~~~------~~~~~ld~~ki~~~gi~fep~~  433 (437)
                        .+++.|+++.+.+.+|.+ .+.+|+...+...      .....+|.+|+++. ++|+|+.
T Consensus       212 --~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lG~~p~~  270 (286)
T 3ius_A          212 --PVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEE-LGVRLKY  270 (286)
T ss_dssp             --CBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHT-TCCCCSC
T ss_pred             --CccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHH-hCCCCCc
Confidence              478999999999999953 2234544332221      25668899999997 7888874

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.82  E-value=1.4e-19  Score=174.52  Aligned_cols=191  Identities=13%  Similarity=0.035  Sum_probs=139.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      |++|+||||||+||||++|+++|+++|++|++++|+....    ....+.++.+|++|.+++.++++++|+||||||...
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~   76 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----AGPNEECVQCDLADANAVNAMVAGCDGIVHLGGISV   76 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC----CCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc----cCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcC
Confidence            3568999999999999999999999999999999986531    145789999999999999999999999999999854


Q ss_pred             -CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccch
Q 013761          239 -TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDA  315 (437)
Q Consensus       239 -~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~  315 (437)
                       ..+++++++|+.|++++++++++.+++ +.++++. .++...  ....+.+.       .|..+...|+.+|...+.+.
T Consensus        77 ~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~--~~~~~~e~-------~~~~~~~~Y~~sK~~~e~~~  147 (267)
T 3rft_A           77 EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYP--QTERLGPD-------VPARPDGLYGVSKCFGENLA  147 (267)
T ss_dssp             CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSB--TTSCBCTT-------SCCCCCSHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCC--CCCCCCCC-------CCCCCCChHHHHHHHHHHHH
Confidence             347889999999999999999998874 6555532 221110  00112221       23334578999999998888


Q ss_pred             hhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc
Q 013761          316 KFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       316 ~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~  363 (437)
                      .....+++..+...++...++...-.... ....+++|+++.+...+.
T Consensus       148 ~~~a~~~g~~~~~vr~~~v~~~~~~~~~~-~~~~~~~d~a~~~~~~~~  194 (267)
T 3rft_A          148 RMYFDKFGQETALVRIGSCTPEPNNYRML-STWFSHDDFVSLIEAVFR  194 (267)
T ss_dssp             HHHHHHHCCCEEEEEECBCSSSCCSTTHH-HHBCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCeEEEEEeecccCCCCCCCce-eeEEcHHHHHHHHHHHHh
Confidence            77766777776666666555421111100 011258899998887774

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.82  E-value=9.3e-20  Score=175.91  Aligned_cols=201  Identities=20%  Similarity=0.144  Sum_probs=140.4

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+.  +   .++..+.++.++++|++|+++++++++.     
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999999999999998762  1   2333466899999999999999988875     


Q ss_pred             --ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 --CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 --~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                        +|+||||||+...          .|++++++|+.|++++++++      ++.|.....|       ++++.+|+....
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~p~m~~~~~G-------~IVnisS~~g~~  149 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAV------IPIMLKQGKG-------VIVNTASIAGIR  149 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTC
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCc-------EEEEEechhhcC
Confidence              4999999997432          16789999999999999999      7777654444       578877776654


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcccc------cceeeeeeeccCcccee----------ccc--cCCCcccHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETG------DAVFSGYVFTRGGYVEL----------SKK--LSLPLGCTLDRYE  356 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~------~~v~~g~~~~~~G~~~i----------~~~--~~~p~g~v~D~~~  356 (437)
                      ..|+  ...|..+|.+...+......+.+      +.+.|+.+.++......          ...  +.-..+..+|+++
T Consensus       150 ~~~~--~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~  227 (254)
T 4fn4_A          150 GGFA--GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIAN  227 (254)
T ss_dssp             SSSS--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHH
T ss_pred             CCCC--ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence            4443  56788888776655544444433      24555555544221000          000  1011335678777


Q ss_pred             HHHHHhc-----cCCcEEEEE
Q 013761          357 GLVLSVG-----GNGRSYVLI  372 (437)
Q Consensus       357 gi~l~~~-----~~Ge~y~l~  372 (437)
                      +++..+.     -.|+...+.
T Consensus       228 ~v~fLaSd~a~~iTG~~i~VD  248 (254)
T 4fn4_A          228 VIVFLASDEASFVNGDAVVVD  248 (254)
T ss_dssp             HHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHhCchhcCCcCCEEEeC
Confidence            7766552     247766664

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.82  E-value=4.1e-19  Score=177.15  Aligned_cols=103  Identities=21%  Similarity=0.263  Sum_probs=90.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-----CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG-----YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIY  232 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G-----~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh  232 (437)
                      +|+||||||+||||++|+++|+++|     ++|++++|+.....  ....++.++.+|++|.+++.+++++   +|+|||
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih   78 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFY   78 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence            4689999999999999999999999     99999999865311  1234788999999999999999998   999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHHHHHHhc--CCc
Q 013761          233 CATARSTITGDLFRVDYQGVYNVTKAFQDF--NNK  265 (437)
Q Consensus       233 ~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~--gvk  265 (437)
                      +||.....+...+++|+.|+.++++++++.  +++
T Consensus        79 ~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~  113 (364)
T 2v6g_A           79 VTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLK  113 (364)
T ss_dssp             CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCC
T ss_pred             CCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccc
Confidence            999877667889999999999999999987  565

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.82  E-value=2.1e-19  Score=173.64  Aligned_cols=205  Identities=19%  Similarity=0.189  Sum_probs=147.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      |+|||||||||||++++++|+++  |++|++++|+.+. ..+.  ...+.++.+|++|.+++.++++++|+|||+||...
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   78 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA--DQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHY   78 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH--HTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh--hcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCc
Confidence            47999999999999999999999  9999999998653 1111  24688999999999999999999999999999632


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-------CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhh
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-------KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-------~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                         ..  ++|+.++.++++++++.+++ +.++++.       .|+.+|...|.++...++.++++||+.+..+....   
T Consensus        79 ---~~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~---  150 (287)
T 2jl1_A           79 ---DN--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNE---  150 (287)
T ss_dssp             ---CH--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSG---
T ss_pred             ---Cc--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHHHcCCCeEEEECCEeccccchh---
Confidence               22  67999999999999999984 5555532       46677888888887788999999998554322010   


Q ss_pred             cccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHH
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLY  387 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~  387 (437)
                        .  +......+      ....+.|  ...    ....+++|++++++.++..   .|+.|++.  .+   +.+++.|+
T Consensus       151 --~--~~~~~~~~------~~~~~~~--~~~----~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~--~~---~~~s~~e~  209 (287)
T 2jl1_A          151 --G--LRASTESG------AIVTNAG--SGI----VNSVTRNELALAAATVLTEEGHENKTYNLV--SN---QPWTFDEL  209 (287)
T ss_dssp             --G--GHHHHHHT------EEEESCT--TCC----BCCBCHHHHHHHHHHHHTSSSCTTEEEEEC--CS---SCBCHHHH
T ss_pred             --h--HHHHhhCC------ceeccCC--CCc----cCccCHHHHHHHHHHHhcCCCCCCcEEEec--CC---CcCCHHHH
Confidence              0  00000011      1111111  111    1223699999999998843   46777663  33   24689999


Q ss_pred             HHHHHhhhCC
Q 013761          388 FARFSTKVGF  397 (437)
Q Consensus       388 ~~~i~~~~G~  397 (437)
                      ++.+.+.+|.
T Consensus       210 ~~~i~~~~g~  219 (287)
T 2jl1_A          210 AQILSEVSGK  219 (287)
T ss_dssp             HHHHHHHHSS
T ss_pred             HHHHHHHHCC
Confidence            9999999984

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.81  E-value=4.3e-20  Score=172.24  Aligned_cols=201  Identities=17%  Similarity=0.094  Sum_probs=133.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCC-HHHHHHHHhcccEEEEeccCCCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGD-PCTLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd-~~~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      |+||||||+|+||++++++|+++|++|++++|+.+..  ... .++.++.+|++| .+++.++++++|+||||||...  
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~--   75 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV--PQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG--   75 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS--CCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT--
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch--hhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC--
Confidence            4899999999999999999999999999999986531  111 579999999999 9999999999999999999765  


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhh
Q 013761          241 TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFEL  319 (437)
Q Consensus       241 ~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~  319 (437)
                       .+.+++|+.++.++++++++.+++ +.++++. ++...    ....+        .|..+...|+.+|...+....   
T Consensus        76 -~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~~~~~----~~~~e--------~~~~~~~~Y~~sK~~~e~~~~---  138 (219)
T 3dqp_A           76 -KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI-FSLQP----EKWIG--------AGFDALKDYYIAKHFADLYLT---  138 (219)
T ss_dssp             -SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT-TTTCG----GGCCS--------HHHHHTHHHHHHHHHHHHHHH---
T ss_pred             -CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc-cccCC----Ccccc--------cccccccHHHHHHHHHHHHHH---
Confidence             347788999999999999999875 5555532 11000    00000        111234556666666555443   


Q ss_pred             cccccceeeeeeeccCccc---eec-cccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHHHH
Q 013761          320 SETGDAVFSGYVFTRGGYV---ELS-KKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYFAR  390 (437)
Q Consensus       320 ~~~~~~v~~g~~~~~~G~~---~i~-~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~~~  390 (437)
                      ...+..+...++...+|..   ... ........+++|++++++..+..   .|+.|++..+      ..+++|++..
T Consensus       139 ~~~~i~~~ilrp~~v~g~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g------~~~~~e~~~~  210 (219)
T 3dqp_A          139 KETNLDYTIIQPGALTEEEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNG------KTAIKEALES  210 (219)
T ss_dssp             HSCCCEEEEEEECSEECSCCCSEEEESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEEC------SEEHHHHHHT
T ss_pred             hccCCcEEEEeCceEecCCCCCccccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCC------CccHHHHHHH
Confidence            2334333333333322211   100 01112234799999999999843   3778877433      2467776553

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.81  E-value=6.3e-20  Score=173.06  Aligned_cols=206  Identities=15%  Similarity=0.151  Sum_probs=132.2

Q ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCe-EEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          156 IPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSV-EIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v-~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ...+++|+||||||+||||++|+++|+++|++|++++|+.+.. ...  ..++ .++.+|++  +++.+++.++|+||||
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~--~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~   91 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR--ERGASDIVVANLE--EDFSHAFASIDAVVFA   91 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--HTTCSEEEECCTT--SCCGGGGTTCSEEEEC
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH--hCCCceEEEcccH--HHHHHHHcCCCEEEEC
Confidence            3457899999999999999999999999999999999987631 111  2367 99999999  7788899999999999


Q ss_pred             ccCCC-CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          234 ATARS-TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       234 Ag~~~-~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                      ||... ..+++.+++|+.++.++++++++.+++ +.++++-...  .       .+.       .| .+...|+.+|...
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~--~-------~~~-------~~-~~~~~Y~~sK~~~  154 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV--D-------PDQ-------GP-MNMRHYLVAKRLA  154 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCS--C-------GGG-------SC-GGGHHHHHHHHHH
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCC--C-------CCC-------Ch-hhhhhHHHHHHHH
Confidence            99865 347889999999999999999998875 5555431100  0       000       00 1233455555544


Q ss_pred             ccchhhhhcccccceee---eeeeccCcccee--cccc--CCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCC
Q 013761          312 GMDAKFELSETGDAVFS---GYVFTRGGYVEL--SKKL--SLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADR  381 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~---g~~~~~~G~~~i--~~~~--~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~  381 (437)
                      +....    +.+..+..   +.++++......  ....  .....+++|++++++.++..   .|+.|++..+      .
T Consensus       155 e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~------~  224 (236)
T 3e8x_A          155 DDELK----RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG------D  224 (236)
T ss_dssp             HHHHH----HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC------S
T ss_pred             HHHHH----HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC------C
Confidence            43322    22222222   222222110000  0000  02233799999999999843   5788877433      2


Q ss_pred             CcHHHHHHHHH
Q 013761          382 SQSKLYFARFS  392 (437)
Q Consensus       382 ~s~~e~~~~i~  392 (437)
                      .++.|+++.+.
T Consensus       225 ~~~~e~~~~i~  235 (236)
T 3e8x_A          225 TPIAKVVEQLG  235 (236)
T ss_dssp             EEHHHHHHTC-
T ss_pred             cCHHHHHHHhc
Confidence            57888887654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.81  E-value=8.8e-19  Score=175.48  Aligned_cols=217  Identities=16%  Similarity=0.121  Sum_probs=148.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC-CC-eEEEEecCCcH--HHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLR-GY-SVKALVRKADQ--EVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~-G~-~V~~~~R~~~~--~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      ++.+|+||||||+|+||++|+++|+++ |+ +|++++|+...  .....+ ...+.++.+|++|.+++.++++++|+|||
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            367899999999999999999999999 97 99999997652  111222 35789999999999999999999999999


Q ss_pred             eccCCCC-----chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-------Ccchhhhhhhhhcc-------CCCCcc
Q 013761          233 CATARST-----ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-------KSSKSKLLLAKFKS-------ADSLNG  292 (437)
Q Consensus       233 ~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-------~~g~sk~~~~k~v~-------~ssl~~  292 (437)
                      +||....     .+.+.+++|+.|+.++++++.+.+++ +.++++.       .|+.+|...+.++.       ..++..
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~  177 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQF  177 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGGGCCCSSCCEE
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence            9997652     24578999999999999999999985 5555532       35666666665433       145677


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhccccc-ceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc--cCCcEE
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSETGD-AVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG--GNGRSY  369 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~-~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~--~~Ge~y  369 (437)
                      +++||+.++.+.+. ..    .........+. .+   .+..+    ...+.    ..+++|++++++.++.  ..|+.|
T Consensus       178 ~~vRpg~v~g~~~~-~i----~~~~~~~~~g~~~~---~i~~~----~~~r~----~i~v~D~a~~v~~~l~~~~~g~~~  241 (344)
T 2gn4_A          178 SVVRYGNVVGSRGS-VV----PFFKKLVQNKASEI---PITDI----RMTRF----WITLDEGVSFVLKSLKRMHGGEIF  241 (344)
T ss_dssp             EEECCCEETTCTTS-HH----HHHHHHHHHTCCCE---EESCT----TCEEE----EECHHHHHHHHHHHHHHCCSSCEE
T ss_pred             EEEEeccEECCCCC-HH----HHHHHHHHcCCCce---EEeCC----CeEEe----eEEHHHHHHHHHHHHhhccCCCEE
Confidence            77888755543211 00    00000000111 00   01110    00111    2368999999998884  346777


Q ss_pred             EEEccCCCCCCCCcHHHHHHHHHhhhC
Q 013761          370 VLILEAGPSADRSQSKLYFARFSTKVG  396 (437)
Q Consensus       370 ~l~l~~~~~~~~~s~~e~~~~i~~~~G  396 (437)
                      ++  ..+    .+++.|+++.+.+..+
T Consensus       242 ~~--~~~----~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          242 VP--KIP----SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             EE--CCC----EEEHHHHHHHHCTTCC
T ss_pred             ec--CCC----cEEHHHHHHHHHHhCC
Confidence            65  222    3689999999987554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.80  E-value=9.1e-19  Score=165.15  Aligned_cols=212  Identities=19%  Similarity=0.155  Sum_probs=145.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +++|+||||||+|+||++++++|+++  |++|++++|+.+.  ...+...+.++.+|++|.+++.++++++|+||||||.
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--KEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH--HHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc--hhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            45789999999999999999999999  8999999997543  2233557789999999999999999999999999997


Q ss_pred             CCC------------c------hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC----------cc-----hhhhhhh
Q 013761          237 RST------------I------TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK----------SS-----KSKLLLA  282 (437)
Q Consensus       237 ~~~------------~------~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~----------~g-----~sk~~~~  282 (437)
                      ...            .      +.+.+++|+.++.++++++++.+++ +.++++..          |+     .+|...+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e  159 (253)
T 1xq6_A           80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAE  159 (253)
T ss_dssp             CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHH
Confidence            531            1      1246899999999999999998875 55554311          11     2455566


Q ss_pred             hhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHh
Q 013761          283 KFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       283 k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~  362 (437)
                      .++...++.+++++|+.++.+....      .          ...........+      . .....+++|++++++..+
T Consensus       160 ~~~~~~~i~~~~vrpg~v~~~~~~~------~----------~~~~~~~~~~~~------~-~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          160 QYLADSGTPYTIIRAGGLLDKEGGV------R----------ELLVGKDDELLQ------T-DTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             HHHHTSSSCEEEEEECEEECSCSSS------S----------CEEEESTTGGGG------S-SCCEEEHHHHHHHHHHHT
T ss_pred             HHHHhCCCceEEEecceeecCCcch------h----------hhhccCCcCCcC------C-CCcEEcHHHHHHHHHHHH
Confidence            6666667777777777544332100      0          000000000000      0 011236899999999988


Q ss_pred             cc---CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          363 GG---NGRSYVLILEAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       363 ~~---~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                      ..   .|+.|++..+..  ...+++.|+++.+.+.+|.
T Consensus       217 ~~~~~~g~~~~i~~~~~--~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          217 LFEEAKNKAFDLGSKPE--GTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             TCGGGTTEEEEEEECCT--TTSCCCCCHHHHHHTCCCC
T ss_pred             cCccccCCEEEecCCCc--CCCCCHHHHHHHHHHHhCC
Confidence            43   477887754321  1135788999999988763

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.80  E-value=5.2e-19  Score=169.87  Aligned_cols=149  Identities=16%  Similarity=0.115  Sum_probs=108.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +....+...+.++.+|++|+++++++++       .+|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            3778999999999999999999999999999999998652  2334446678999999999999999887       579


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||+...         .+++.+++|+.|++++++++.+      .|.... .+       +++..++.......| 
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~------~~~~~~~~g-------~iv~isS~~~~~~~~-  150 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAAR------QMIAQGRGG-------KIINMASQAGRRGEA-  150 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHTSCE-------EEEEECCGGGTSCCT-
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH------HHHhcCCCe-------EEEEECChhhccCCC-
Confidence            99999998532         1567899999999999999844      322111 11       344444433222222 


Q ss_pred             cccchhhhhhhhcccchhhhhcc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                       ....|+.+|.+.+.+......+
T Consensus       151 -~~~~Y~asK~a~~~~~~~la~e  172 (259)
T 4e6p_A          151 -LVAIYCATKAAVISLTQSAGLD  172 (259)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CChHHHHHHHHHHHHHHHHHHH
Confidence             3456777777766655444333

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.80  E-value=2.7e-19  Score=173.44  Aligned_cols=218  Identities=19%  Similarity=0.154  Sum_probs=139.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.  +.....+..+.++.+|++|.++++++++       .+|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            467899999999999999999999999999999998763  3344556789999999999999999887       5699


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+...         .+++.+++|+.|++++++++      ++.|.....+       +++..++.....  |...
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~~~~~~~~-------~iv~~sS~~~~~--~~~~  147 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL------LPQMRERGSG-------SVVNISSFGGQL--SFAG  147 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTC--CCTT
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHhcCCC-------EEEEEcCccccC--CCCC
Confidence            9999997432         15668999999998888887      3333221111       344444433322  2223


Q ss_pred             cchhhhhhhhcccchhhhhcc---cccc---eeeeeeeccC-cc-----ceeccc---------------cCCCcccHHH
Q 013761          301 FQDVVAFKYDAGMDAKFELSE---TGDA---VFSGYVFTRG-GY-----VELSKK---------------LSLPLGCTLD  353 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~---~~~~---v~~g~~~~~~-G~-----~~i~~~---------------~~~p~g~v~D  353 (437)
                      ...|+.+|.+.+.+......+   .+..   +.++.+.++. +.     ......               .....++++|
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  227 (281)
T 3m1a_A          148 FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAK  227 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHH
Confidence            567888888777666544444   3332   3333333321 10     000000               0011247999


Q ss_pred             HHHHHHHHhc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC
Q 013761          354 RYEGLVLSVG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVG  396 (437)
Q Consensus       354 ~~~gi~l~~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G  396 (437)
                      ++++++.++.  ..+..|.+  +++.   ...+.+....+.+..+
T Consensus       228 va~a~~~~~~~~~~~~~~~l--~s~~---~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          228 AAAAIRLALDTEKTPLRLAL--GGDA---VDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHHSSSCCSEEEE--SHHH---HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCeEEec--CchH---HHHHHHHHHHHHHHHH
Confidence            9999999884  44666765  3321   2234455555555443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.80  E-value=1e-18  Score=167.89  Aligned_cols=202  Identities=14%  Similarity=0.103  Sum_probs=135.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +   .+......+.++.+|++|.++++++++       
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998652  1   122335688999999999999998887       


Q ss_pred             cccEEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          226 NCNKIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      .+|+||||||+...        .+++.+++|+.|++++++++      ++.|.....+       +++..++.......|
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~~~~  155 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLA------APHMQKAGGG-------AILNISSMAGENTNV  155 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEEECCGGGTCCCT
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCc-------EEEEEcCHHHcCCCC
Confidence            56999999997543        25678999999999999998      4444332222       355555544332223


Q ss_pred             Ccccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCcc----ceec----cc-cCCCcccHHHHHHHHHHHh
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGY----VELS----KK-LSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~----~~i~----~~-~~~p~g~v~D~~~gi~l~~  362 (437)
                        ....|+.+|.+.+.+......+++.      .+.++.+.++.-.    ....    .. .....+..+|++++++..+
T Consensus       156 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~  233 (256)
T 3gaf_A          156 --RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLC  233 (256)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             --CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence              3567888888777666544444322      2233333322100    0000    00 1112346889999888776


Q ss_pred             c-----cCCcEEEEEcc
Q 013761          363 G-----GNGRSYVLILE  374 (437)
Q Consensus       363 ~-----~~Ge~y~l~l~  374 (437)
                      .     -.|+.+.+.++
T Consensus       234 s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          234 SPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCcccCccCCEEEECCC
Confidence            3     24888877544

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.80  E-value=6.6e-19  Score=171.16  Aligned_cols=221  Identities=19%  Similarity=0.157  Sum_probs=144.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCC---CeEEEEecCCCHHHHHHHHhc---
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPR---SVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~---~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.  +.   +.....   .+.++.+|++|+++++++++.   
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3788999999999999999999999999999999998652  11   222222   688999999999999988874   


Q ss_pred             ----ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          227 ----CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                          +|+||||||+...          .|++.+++|+.|++++++++.+      .|.....+       +++..++...
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~------~~~~~~~g-------~iv~isS~~~  154 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAR------EMVRGGGG-------SFVGISSIAA  154 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH------HHHHTTCE-------EEEEECCHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHhcCCc-------EEEEEeCHHH
Confidence                5999999997321          1567899999999999999843      33322221       3454444433


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCccc-----eec----c-ccCCCcccHHHHHH
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYV-----ELS----K-KLSLPLGCTLDRYE  356 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~-----~i~----~-~~~~p~g~v~D~~~  356 (437)
                      ..  +......|+.+|.+.+.+......+++.      .+.++.+.++....     ...    . ......+.++|+++
T Consensus       155 ~~--~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (281)
T 3svt_A          155 SN--THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVAN  232 (281)
T ss_dssp             HS--CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHH
T ss_pred             cC--CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            22  2223567888888777766555444432      23333333322100     000    0 01112346899999


Q ss_pred             HHHHHhc-----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          357 GLVLSVG-----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       357 gi~l~~~-----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                      +++..+.     -.|+.+.+.++..    .....++.+.+.+..|.
T Consensus       233 ~~~~l~s~~~~~itG~~~~vdgG~~----~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          233 MAMFLLSDAASFVTGQVINVDGGQM----LRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG----GSCCCCCHHHHHHHHCT
T ss_pred             HHHHHhCcccCCCCCCEEEeCCChh----cccCCcchhccccccCC
Confidence            9887763     2588887754432    11244667777777663

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.79  E-value=6.9e-19  Score=167.74  Aligned_cols=200  Identities=19%  Similarity=0.165  Sum_probs=130.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+..+   +   .+......+.++.+|++|.++++++++       
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999886532   1   122335678999999999999999887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      .+|+||||||+...         .|++.+++|+.|++++++++      ++.|.....+       +++..++.......
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~~~~g-------~iv~isS~~~~~~~  148 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKA------TPQMLRQRSG-------AIINLSSVVGAVGN  148 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCHHHHHCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHcCCC-------EEEEEcchhhcCCC
Confidence            56999999997532         15679999999999999999      3333221111       34444443322222


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc--e-e----ccc-cCCCcccHHHHHHHHHHHh
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV--E-L----SKK-LSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~--~-i----~~~-~~~p~g~v~D~~~gi~l~~  362 (437)
                      |  ....|+.+|.+.+.+......+.   +.   .+.++.+.++....  . .    ... .....+..+|++++++..+
T Consensus       149 ~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~  226 (246)
T 3osu_A          149 P--GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLA  226 (246)
T ss_dssp             T--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred             C--CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            2  35668888877766654444433   22   23333333322100  0 0    000 1112346789999888776


Q ss_pred             c-----cCCcEEEEEc
Q 013761          363 G-----GNGRSYVLIL  373 (437)
Q Consensus       363 ~-----~~Ge~y~l~l  373 (437)
                      .     -.|+.+.+.+
T Consensus       227 s~~~~~itG~~i~vdg  242 (246)
T 3osu_A          227 SDKAKYITGQTIHVNG  242 (246)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CccccCCCCCEEEeCC
Confidence            3     2378777743

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.79  E-value=5.5e-19  Score=168.93  Aligned_cols=201  Identities=16%  Similarity=0.134  Sum_probs=132.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|+++++++++       .+|
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4788999999999999999999999999999999998652  2233344567899999999999999887       569


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +||||||+...         .|++.+++|+.|++++++++      ++.|.....+       +++..++.......|  
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~m~~~~~g-------~iv~isS~~~~~~~~--  150 (248)
T 3op4_A           86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAV------LRGMMKKRQG-------RIINVGSVVGTMGNA--  150 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCHHHHHCCT--
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHcCCC-------EEEEEcchhhcCCCC--
Confidence            99999997542         15678999999999999998      4444322111       345544443322222  


Q ss_pred             ccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccce-------eccc-cCCCcccHHHHHHHHHHHhc--
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYVE-------LSKK-LSLPLGCTLDRYEGLVLSVG--  363 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~~-------i~~~-~~~p~g~v~D~~~gi~l~~~--  363 (437)
                      ....|+.+|.+...+......+.+   .   .+.++.+.++.....       .... .....+..+|++++++..+.  
T Consensus       151 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~  230 (248)
T 3op4_A          151 GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPE  230 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            356688888776666544444332   2   233333333221000       0000 11112368899988877662  


Q ss_pred             ---cCCcEEEEEc
Q 013761          364 ---GNGRSYVLIL  373 (437)
Q Consensus       364 ---~~Ge~y~l~l  373 (437)
                         -.|+.+.+.+
T Consensus       231 ~~~itG~~i~vdg  243 (248)
T 3op4_A          231 AAYITGETLHVNG  243 (248)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             cCCccCcEEEECC
Confidence               2478777743

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.79  E-value=1.2e-18  Score=169.57  Aligned_cols=207  Identities=15%  Similarity=0.104  Sum_probs=134.8

Q ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh----
Q 013761          155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE----  225 (437)
Q Consensus       155 ~~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~----  225 (437)
                      ...++.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|+++++++++    
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3445889999999999999999999999999999999998652  11   22335678999999999999999987    


Q ss_pred             ---cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 ---NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                         .+|+||||||+....         +++.+++|+.|++++++++.+      .|.....+      .+++..++....
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~m~~~~~~------g~iv~isS~~~~  173 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR------AMVDQGLG------GTIITTASMSGH  173 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHTSC------EEEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH------HHHHcCCC------cEEEEECchHhc
Confidence               569999999986431         567899999999999999843      33221110      124444444332


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc--ee----cccc-CCCcccHHHHHHHHHH
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV--EL----SKKL-SLPLGCTLDRYEGLVL  360 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~--~i----~~~~-~~p~g~v~D~~~gi~l  360 (437)
                      ...+......|..+|.+.+.+......+.+   .   .+.++.+.++....  ..    .... ....+..+|++++++.
T Consensus       174 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  253 (276)
T 3r1i_A          174 IINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLY  253 (276)
T ss_dssp             SCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHH
T ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            222222356688888877766654444432   2   23344444332100  00    0000 0112357788888877


Q ss_pred             Hhc-----cCCcEEEEEc
Q 013761          361 SVG-----GNGRSYVLIL  373 (437)
Q Consensus       361 ~~~-----~~Ge~y~l~l  373 (437)
                      .+.     -.|+.+.+.+
T Consensus       254 L~s~~~~~itG~~i~vdG  271 (276)
T 3r1i_A          254 LASAASSYMTGSDIVIDG  271 (276)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HcCccccCccCcEEEECc
Confidence            663     2578777743

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.79  E-value=1.3e-18  Score=181.95  Aligned_cols=234  Identities=15%  Similarity=0.078  Sum_probs=152.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEecCCcHHH-H----hh---------------CCCCeEEEEecC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLR---GYSVKALVRKADQEV-V----DM---------------LPRSVEIVLGDV  214 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~---G~~V~~~~R~~~~~~-~----~~---------------~~~~v~~v~~Dl  214 (437)
                      ...+|+||||||+||||++|+++|++.   |++|++++|+.+... .    +.               ...++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            356899999999999999999999998   999999999876321 1    11               125799999999


Q ss_pred             C------CHHHHHHHHhcccEEEEeccCCCC-chhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecCC-cchhhhhhhhhc
Q 013761          215 G------DPCTLKAAVENCNKIIYCATARST-ITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAGK-SSKSKLLLAKFK  285 (437)
Q Consensus       215 t------d~~~v~~a~~~~D~VIh~Ag~~~~-~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~~-~g~sk~~~~k~v  285 (437)
                      +      |.+.++++++++|+||||||.... .+.+.+++|+.|+.++++++.+.++ ++.++++.. |+...   ...+
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~---~~~~  226 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIE---PSAF  226 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSC---TTTC
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccC---CCCc
Confidence            8      777899999999999999998654 3557899999999999999999887 466666421 11100   0111


Q ss_pred             cCCCCcc----eeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce-------------ec-------
Q 013761          286 SADSLNG----WEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-------------LS-------  341 (437)
Q Consensus       286 ~~ssl~~----~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-------------i~-------  341 (437)
                      .+.....    ....+..+.+.|+.+|..++........+.+..+...+....||...             ..       
T Consensus       227 ~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g  306 (478)
T 4dqv_A          227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATG  306 (478)
T ss_dssp             CSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHC
T ss_pred             CCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcC
Confidence            1111000    00001112344778888777766655544455444444443333100             00       


Q ss_pred             ---c------------ccCCCcccHHHHHHHHHHHhcc-------CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCc
Q 013761          342 ---K------------KLSLPLGCTLDRYEGLVLSVGG-------NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFC  398 (437)
Q Consensus       342 ---~------------~~~~p~g~v~D~~~gi~l~~~~-------~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~  398 (437)
                         .            ...+...+++|++++++.++..       .++.|++  .++. ...+++.|+++.+.+. |.+
T Consensus       307 ~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv--~~~~-~~~~s~~el~~~l~~~-g~~  381 (478)
T 4dqv_A          307 IAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHV--MNPH-DDGIGLDEYVDWLIEA-GYP  381 (478)
T ss_dssp             EEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEE--SCCC-CSSCSHHHHHHHHHHT-TCS
T ss_pred             cccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEe--cCCC-CCCcCHHHHHHHHHHc-CCC
Confidence               0            0011224899999999988732       3456766  4432 1126899999999986 643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.79  E-value=1.3e-18  Score=169.22  Aligned_cols=202  Identities=15%  Similarity=0.115  Sum_probs=134.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++...+.++.+|++|.++++++++       .+|
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3788999999999999999999999999999999998652  2333446688999999999999998887       469


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +||||||+...         .|++.+++|+.|++++++++      ++.|.....+       +++..++.......|  
T Consensus       104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~~~~g-------~iv~isS~~~~~~~~--  168 (277)
T 4dqx_A          104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYV------IPVMRRNGGG-------SIINTTSYTATSAIA--  168 (277)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHH------HHHHTTTTCE-------EEEEECCGGGTSCCT--
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHcCCc-------EEEEECchhhCcCCC--
Confidence            99999997532         15678999999999999999      4444332222       345545443322222  


Q ss_pred             ccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccC-cc-----ce-------ec-cccCCCcccHHHHHHHHH
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRG-GY-----VE-------LS-KKLSLPLGCTLDRYEGLV  359 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~-G~-----~~-------i~-~~~~~p~g~v~D~~~gi~  359 (437)
                      ....|+.+|.+.+.+......+++   .   .+.++.+.++. ..     ..       .. .......+..+|++++++
T Consensus       169 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~  248 (277)
T 4dqx_A          169 DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAML  248 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHH
Confidence            356688888777666544443332   2   23333333321 00     00       00 001112346889999988


Q ss_pred             HHhc-----cCCcEEEEEcc
Q 013761          360 LSVG-----GNGRSYVLILE  374 (437)
Q Consensus       360 l~~~-----~~Ge~y~l~l~  374 (437)
                      ..+.     -.|+.+.+.++
T Consensus       249 ~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          249 FLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             HHHSGGGTTCCSCEEEESSS
T ss_pred             HHhCCccCCCcCCEEEECCc
Confidence            7763     25887777544

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.79  E-value=1e-18  Score=169.09  Aligned_cols=201  Identities=16%  Similarity=0.122  Sum_probs=129.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|+++++++++       .+|
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999999998652  2334446689999999999999998887       569


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +||||||+...         .|++++++|+.|++++++++      ++.|.....+       +++..++.......|  
T Consensus       104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~Iv~isS~~~~~~~~--  168 (266)
T 3grp_A          104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTREL------IHSMMRRRYG-------RIINITSIVGVVGNP--  168 (266)
T ss_dssp             EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCC---------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHcCCc-------EEEEECCHHHcCCCC--
Confidence            99999998542         26678999999999999988      4343322111       355555544332223  


Q ss_pred             ccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCcc--ce-----ecccc-CCCcccHHHHHHHHHHHhc--
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGY--VE-----LSKKL-SLPLGCTLDRYEGLVLSVG--  363 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~--~~-----i~~~~-~~p~g~v~D~~~gi~l~~~--  363 (437)
                      ....|..+|.+...+......+.+   .   .+.++.+.++...  ..     ..... ....+..+|++++++..+.  
T Consensus       169 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~  248 (266)
T 3grp_A          169 GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDE  248 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            245677777766655544443332   2   2222222222100  00     00001 1123467899998887663  


Q ss_pred             ---cCCcEEEEEc
Q 013761          364 ---GNGRSYVLIL  373 (437)
Q Consensus       364 ---~~Ge~y~l~l  373 (437)
                         -.|+.+.+.+
T Consensus       249 ~~~itG~~i~vdG  261 (266)
T 3grp_A          249 AAYLTGQTLHING  261 (266)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             ccCccCCEEEECC
Confidence               2578777743

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.79  E-value=1.8e-18  Score=166.62  Aligned_cols=198  Identities=19%  Similarity=0.107  Sum_probs=132.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VI  231 (437)
                      +++|+||||||+||||++++++|+++|++|++++|+.+.    .....+.++.+|++|+++++++++       .+|+||
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP----SADPDIHTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC----CSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh----cccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            678999999999999999999999999999999998653    112368999999999999999887       579999


Q ss_pred             EeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          232 YCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       232 h~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ||||+....         +++.+++|+.|++++++++      ++.|.....+       +++..++.......+.....
T Consensus       102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~iv~isS~~~~~~~~~~~~~  168 (260)
T 3un1_A          102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRA------AAEMLKQGSG-------HIVSITTSLVDQPMVGMPSA  168 (260)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEEECCTTTTSCBTTCCCH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHcCCc-------EEEEEechhhccCCCCCccH
Confidence            999975321         5678999999999999998      3333322111       23433333222222333456


Q ss_pred             hhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccceec----c-ccCCCcccHHHHHHHHHHHhc---cCCcE
Q 013761          303 DVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVELS----K-KLSLPLGCTLDRYEGLVLSVG---GNGRS  368 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~i~----~-~~~~p~g~v~D~~~gi~l~~~---~~Ge~  368 (437)
                      .|+.+|.+.+.+......++   +.   .+.++.+.++.......    . ......+.++|++++++....   -.|+.
T Consensus       169 ~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG~~  248 (260)
T 3un1_A          169 LASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEHAGFITGEI  248 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHhcccCCCCCcE
Confidence            68888887776665544444   22   23334443332111100    0 111123478899998886652   35888


Q ss_pred             EEEEc
Q 013761          369 YVLIL  373 (437)
Q Consensus       369 y~l~l  373 (437)
                      +.+.+
T Consensus       249 i~vdG  253 (260)
T 3un1_A          249 LHVDG  253 (260)
T ss_dssp             EEEST
T ss_pred             EEECC
Confidence            87743

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.79  E-value=5.9e-19  Score=170.23  Aligned_cols=199  Identities=12%  Similarity=0.031  Sum_probs=129.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+..  ....  ..+.++.+|++|.++++++++.       +|+
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ--AGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH--HTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh--cCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6789999999999999999999999999999999987642  1222  2478999999999999998873       699


Q ss_pred             EEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          230 IIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       230 VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      ||||||+....        +++.+++|+.|++++++++      ++.|.....+       +++..++.......|  ..
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~m~~~~~g-------~iv~isS~~~~~~~~--~~  167 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHC------EPLLTASEVA-------DIVHISDDVTRKGSS--KH  167 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHH------HHHHHTSSSC-------EEEEECCGGGGTCCS--SC
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHhcCCc-------EEEEECChhhcCCCC--Cc
Confidence            99999975321        4578999999999999999      4444433222       355555443332222  35


Q ss_pred             chhhhhhhhcccchhhhhccccc-----ceeeeeeeccCccce-ec----cc-cCCCcccHHHHHHHHHHHhc---cCCc
Q 013761          302 QDVVAFKYDAGMDAKFELSETGD-----AVFSGYVFTRGGYVE-LS----KK-LSLPLGCTLDRYEGLVLSVG---GNGR  367 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~~~-----~v~~g~~~~~~G~~~-i~----~~-~~~p~g~v~D~~~gi~l~~~---~~Ge  367 (437)
                      ..|..+|.+.+.+......+++.     .+.++.+.++..... ..    .. .....+..+|++++++..+.   -.|+
T Consensus       168 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~~~itG~  247 (260)
T 3gem_A          168 IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDSTYVTGT  247 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHHCSSCCSC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCCCCC
Confidence            67888888777666555544432     222232222211000 00    00 11112357888888887663   3588


Q ss_pred             EEEEEcc
Q 013761          368 SYVLILE  374 (437)
Q Consensus       368 ~y~l~l~  374 (437)
                      .+.+.++
T Consensus       248 ~i~vdGG  254 (260)
T 3gem_A          248 TLTVNGG  254 (260)
T ss_dssp             EEEESTT
T ss_pred             EEEECCC
Confidence            8877443

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.79  E-value=9.4e-19  Score=170.43  Aligned_cols=147  Identities=18%  Similarity=0.133  Sum_probs=106.7

Q ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          156 IPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      .+++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|+++++++++       .
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            345889999999999999999999999999999999998652  2333446678999999999999998887       4


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+||||||+...         .+++++++|+.|++++++++.      +.|.....+       +++..+++......|
T Consensus       104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~------~~m~~~~~g-------~Iv~isS~~~~~~~~  170 (277)
T 3gvc_A          104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAA------PRMIERGGG-------AIVNLSSLAGQVAVG  170 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHH------HHHHHTTCE-------EEEEECCGGGTSCCT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH------HHHHhcCCc-------EEEEEcchhhccCCC
Confidence            6999999998532         156799999999999999984      333322111       344444443322222


Q ss_pred             Ccccchhhhhhhhcccchhh
Q 013761          298 GTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~  317 (437)
                        ....|+.+|.+.+.+...
T Consensus       171 --~~~~Y~asKaa~~~l~~~  188 (277)
T 3gvc_A          171 --GTGAYGMSKAGIIQLSRI  188 (277)
T ss_dssp             --TBHHHHHHHHHHHHHHHH
T ss_pred             --CchhHHHHHHHHHHHHHH
Confidence              245677777766655543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.79  E-value=1.1e-18  Score=168.23  Aligned_cols=218  Identities=15%  Similarity=0.074  Sum_probs=138.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHh-------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      .+.+|+||||||+||||++++++|+++|++|++++|+.+.  ...+.+.  ..+.++.+|++|.++++++++       .
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999999999999999997642  1222222  278999999999999999887       5


Q ss_pred             ccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 CNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 ~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      +|+||||||....           .+++.+++|+.|++++++++.+.      |.....+       +++..++......
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~-------~iv~isS~~~~~~  159 (278)
T 2bgk_A           93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARV------MIPAKKG-------SIVFTASISSFTA  159 (278)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HGGGTCE-------EEEEECCGGGTCC
T ss_pred             CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HhhcCCC-------eEEEEeeccccCC
Confidence            7999999997532           14668999999999999999543      2211111       2333333322211


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcc---cccc---eeeeeeeccCccc--e----ec----cc---cCCCcccHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSE---TGDA---VFSGYVFTRGGYV--E----LS----KK---LSLPLGCTLDRYE  356 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~---~~~~---v~~g~~~~~~G~~--~----i~----~~---~~~p~g~v~D~~~  356 (437)
                      .|. ....|+.+|...+.+......+   .+..   +.++.+.++....  .    ..    ..   +.....+.+|+++
T Consensus       160 ~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  238 (278)
T 2bgk_A          160 GEG-VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVAD  238 (278)
T ss_dssp             CTT-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHH
T ss_pred             CCC-CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHH
Confidence            121 2456777777666555433332   2332   2233333322100  0    00    00   0011347899999


Q ss_pred             HHHHHhc-----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhh
Q 013761          357 GLVLSVG-----GNGRSYVLILEAGPSADRSQSKLYFARFSTK  394 (437)
Q Consensus       357 gi~l~~~-----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~  394 (437)
                      +++..+.     -.|+.|.+.++.     ..++.|+++.+.+.
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~gg~-----~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDGGY-----TRTNPAFPTALKHG  276 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG-----GGCCTHHHHHSCSC
T ss_pred             HHHHHcCcccccCCCCEEEECCcc-----cccCCccchhhhhh
Confidence            9988773     247777774332     24677888877654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.79  E-value=3.1e-18  Score=165.81  Aligned_cols=202  Identities=16%  Similarity=0.120  Sum_probs=137.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++       .+|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999999998762  3334446688999999999999999887       569


Q ss_pred             EEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          229 KIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       229 ~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +||||||+...           .|++.+++|+.|++++++++      ++.|.....+       +++..++.......|
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~iv~isS~~~~~~~~  154 (271)
T 3tzq_B           88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYA------IPRLISAGGG-------AIVNISSATAHAAYD  154 (271)
T ss_dssp             EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHTTCE-------EEEEECCGGGTSBCS
T ss_pred             EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCC-------EEEEECCHHHcCCCC
Confidence            99999998622           15678999999999999999      4444332222       345545443322222


Q ss_pred             Ccccchhhhhhhhcccchhhhhcc---ccc---ceeeeeeeccCcccee----c----cc-cCCCcccHHHHHHHHHHHh
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSE---TGD---AVFSGYVFTRGGYVEL----S----KK-LSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~---~~~---~v~~g~~~~~~G~~~i----~----~~-~~~p~g~v~D~~~gi~l~~  362 (437)
                        ....|..+|.+.+.+......+   ++.   .+.++.+.++......    .    .. .....+..+|++++++..+
T Consensus       155 --~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~  232 (271)
T 3tzq_B          155 --MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLA  232 (271)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             --CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence              3567888888777666544444   232   2334444443211000    0    00 1111236789999888776


Q ss_pred             c-----cCCcEEEEEcc
Q 013761          363 G-----GNGRSYVLILE  374 (437)
Q Consensus       363 ~-----~~Ge~y~l~l~  374 (437)
                      .     -.|+.+.+.++
T Consensus       233 s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          233 SDRAAFITGQVIAADSG  249 (271)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CcccCCcCCCEEEECCC
Confidence            3     35888888655

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.79  E-value=2.3e-18  Score=167.16  Aligned_cols=202  Identities=17%  Similarity=0.126  Sum_probs=132.0

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc-----------H---H---HHhhCCCCeEEEEecCCCHHH
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-----------Q---E---VVDMLPRSVEIVLGDVGDPCT  219 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~-----------~---~---~~~~~~~~v~~v~~Dltd~~~  219 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|+..           +   +   ........+.++.+|++|+++
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            3478999999999999999999999999999999999731           1   1   122345678999999999999


Q ss_pred             HHHHHh-------cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhh
Q 013761          220 LKAAVE-------NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAK  283 (437)
Q Consensus       220 v~~a~~-------~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k  283 (437)
                      ++++++       .+|+||||||+...         .|++++++|+.|++++++++      ++.|.....+       +
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~~~~~~~g-------~  152 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAV------APGMIKRNYG-------R  152 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------E
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------E
Confidence            999887       56999999997542         15678999999999999998      3433322111       3


Q ss_pred             hccCCCCcceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc-----eec-----------
Q 013761          284 FKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV-----ELS-----------  341 (437)
Q Consensus       284 ~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~-----~i~-----------  341 (437)
                      ++..++.......|  ....|..+|.+.+.+......+.   +.   .+.++.+.++....     ...           
T Consensus       153 iv~isS~~~~~~~~--~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  230 (281)
T 3s55_A          153 IVTVSSMLGHSANF--AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDV  230 (281)
T ss_dssp             EEEECCGGGGSCCT--TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHH
T ss_pred             EEEECChhhcCCCC--CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHH
Confidence            44444443332222  34567777776665554433332   22   23334443332100     000           


Q ss_pred             -------cccCCCcccHHHHHHHHHHHhc-----cCCcEEEEEc
Q 013761          342 -------KKLSLPLGCTLDRYEGLVLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       342 -------~~~~~p~g~v~D~~~gi~l~~~-----~~Ge~y~l~l  373 (437)
                             .....+.++.+|++++++..+.     -.|+.+.+.+
T Consensus       231 ~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  274 (281)
T 3s55_A          231 ESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA  274 (281)
T ss_dssp             HHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence                   0001223468899999887763     2378777743

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.78  E-value=6.7e-19  Score=171.65  Aligned_cols=223  Identities=13%  Similarity=0.142  Sum_probs=151.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHHHhh-CCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDM-LPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~~~~-~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +|+||||||||+||++++++|+++| ++|++++|+.+...... ...+++++.+|++|++++.++++++|+|||+|+...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            5799999999999999999999999 99999999875321111 124688999999999999999999999999998532


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC------------CcchhhhhhhhhccCCCCcceeeccCcccchhh
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG------------KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~------------~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      .   ...+.|+.++.++++++++.+++ +.+.+..            .|+.+|...+.++...++.++++||+.++++..
T Consensus        85 ~---~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~  161 (299)
T 2wm3_A           85 S---CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLL  161 (299)
T ss_dssp             H---TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGG
T ss_pred             c---ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhch
Confidence            1   12467889999999999999986 4443321            234566677777777789999999997765432


Q ss_pred             hhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc----CCcEEEEEccCCCCCCC
Q 013761          306 AFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG----NGRSYVLILEAGPSADR  381 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~----~Ge~y~l~l~~~~~~~~  381 (437)
                      . .+.      ......+...   .+..+.|  ...    .+..+++|++++++.++..    .|+.|.+.  .+    .
T Consensus       162 ~-~~~------~~~~~~g~~~---~~~~~~~--~~~----~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~--g~----~  219 (299)
T 2wm3_A          162 S-HFL------PQKAPDGKSY---LLSLPTG--DVP----MDGMSVSDLGPVVLSLLKMPEKYVGQNIGLS--TC----R  219 (299)
T ss_dssp             T-TTC------CEECTTSSSE---EECCCCT--TSC----EEEECGGGHHHHHHHHHHSHHHHTTCEEECC--SE----E
T ss_pred             h-hcC------CcccCCCCEE---EEEecCC--CCc----cceecHHHHHHHHHHHHcChhhhCCeEEEee--ec----c
Confidence            1 000      0000011000   0001111  001    1123688999999888742    47777662  22    4


Q ss_pred             CcHHHHHHHHHhhhCCce--ecccCCCcc
Q 013761          382 SQSKLYFARFSTKVGFCR--VRVPFSSFR  408 (437)
Q Consensus       382 ~s~~e~~~~i~~~~G~~~--v~iP~~~~r  408 (437)
                      +|+.|+++.+.+.+|.+.  ..+|.+.++
T Consensus       220 ~s~~e~~~~~~~~~g~~~~~~~~~~~~~~  248 (299)
T 2wm3_A          220 HTAEEYAALLTKHTRKVVHDAKMTPEDYE  248 (299)
T ss_dssp             ECHHHHHHHHHHHHSSCEEECCCCTHHHH
T ss_pred             CCHHHHHHHHHHHHCCCceeEecCHHHHH
Confidence            789999999999999532  335555544

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.78  E-value=2e-18  Score=165.37  Aligned_cols=197  Identities=18%  Similarity=0.111  Sum_probs=136.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~Ag  235 (437)
                      |+||++|||||++|||++++++|+++|++|++++|+.+. ........+..+.+|++|+++++++++.   +|+||||||
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG-VHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTS-TTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            689999999999999999999999999999999998763 1122345789999999999999999886   499999999


Q ss_pred             CCCCc-------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhh
Q 013761          236 ARSTI-------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFK  308 (437)
Q Consensus       236 ~~~~~-------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk  308 (437)
                      +..+.       |++++++|+.|++++++++      ++.|... .|       ++++.+|+......|+  ...|..+|
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~------~p~m~~~-~G-------~IVnisS~~~~~~~~~--~~~Y~asK  151 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLA------RPLLAQR-GG-------SILNIASMYSTFGSAD--RPAYSASK  151 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHH------HHHHHHH-CE-------EEEEECCGGGTSCCSS--CHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHc-CC-------eEEEEeeccccCCCCC--CHHHHHHH
Confidence            86432       7789999999999999999      5666432 12       5777777766544444  56788888


Q ss_pred             hhcccchhhhhcccc------cceeeeeeeccCccc-----eecccc--CCCc---ccHHHHHHHHHHHhc-----cCCc
Q 013761          309 YDAGMDAKFELSETG------DAVFSGYVFTRGGYV-----ELSKKL--SLPL---GCTLDRYEGLVLSVG-----GNGR  367 (437)
Q Consensus       309 ~a~~~~~~~~~~~~~------~~v~~g~~~~~~G~~-----~i~~~~--~~p~---g~v~D~~~gi~l~~~-----~~Ge  367 (437)
                      .+...+......+++      +.+.|+.+.++....     +....+  ..|+   +..+|++++++..+.     -.|+
T Consensus       152 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~  231 (242)
T 4b79_A          152 GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGA  231 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCc
Confidence            776665544444433      245555555442100     000000  1222   356777777665552     2466


Q ss_pred             EEEEE
Q 013761          368 SYVLI  372 (437)
Q Consensus       368 ~y~l~  372 (437)
                      ...+.
T Consensus       232 ~l~VD  236 (242)
T 4b79_A          232 VLAVD  236 (242)
T ss_dssp             EEEES
T ss_pred             eEEEC
Confidence            66663

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.78  E-value=7.9e-19  Score=168.57  Aligned_cols=225  Identities=11%  Similarity=-0.030  Sum_probs=151.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC-C
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS-T  239 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~-~  239 (437)
                      +|+||||||+||||++|+++|+++|++|++++|+....    ....+.++.+|++|.+++.++++++|+||||||... .
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   77 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----AEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVER   77 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----CCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----cCCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCC
Confidence            47899999999999999999999999999999986531    224678999999999999999999999999999763 3


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhh
Q 013761          240 ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       240 ~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~  317 (437)
                      .+...+++|+.++.++++++.+.+++ +.++++. .++....  ...+.+.       .|..+...|+.+|...+.....
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~--~~~~~E~-------~~~~~~~~Y~~sK~~~e~~~~~  148 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR--TTRIDTE-------VPRRPDSLYGLSKCFGEDLASL  148 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT--TSCBCTT-------SCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC--CCCCCCC-------CCCCCCChHHHHHHHHHHHHHH
Confidence            46788999999999999999998874 6666542 1221100  0122222       2223457899999988887765


Q ss_pred             hhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhccC---CcEEEEEccCCCCCCCCcHHHHHHHHHhh
Q 013761          318 ELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGN---GRSYVLILEAGPSADRSQSKLYFARFSTK  394 (437)
Q Consensus       318 ~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~---Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~  394 (437)
                      ...+.+..+...++...|+....... .....+++|++++++..+..+   ++.|.+  ..+.   ..+..++.+.  +.
T Consensus       149 ~~~~~gi~~~~lrp~~v~~~~~~~~~-~~~~~~~~dva~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~d~~~~--~~  220 (267)
T 3ay3_A          149 YYHKFDIETLNIRIGSCFPKPKDARM-MATWLSVDDFMRLMKRAFVAPKLGCTVVYG--ASAN---TESWWDNDKS--AF  220 (267)
T ss_dssp             HHHTTCCCEEEEEECBCSSSCCSHHH-HHHBCCHHHHHHHHHHHHHSSCCCEEEEEE--CCSC---SSCCBCCGGG--GG
T ss_pred             HHHHcCCCEEEEeceeecCCCCCCCe-eeccccHHHHHHHHHHHHhCCCCCceeEec--CCCc---cccccCHHHH--HH
Confidence            55566666666666554431100000 011236899999999888533   233433  2222   1233444444  67


Q ss_pred             hCCceecccCCCc
Q 013761          395 VGFCRVRVPFSSF  407 (437)
Q Consensus       395 ~G~~~v~iP~~~~  407 (437)
                      +||. +++++...
T Consensus       221 lg~~-p~~~~~~~  232 (267)
T 3ay3_A          221 LGWV-PQDSSEIW  232 (267)
T ss_dssp             GCCC-CCCCGGGG
T ss_pred             cCCC-CCCCHHHH
Confidence            7874 34454433

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.78  E-value=3.1e-18  Score=164.97  Aligned_cols=203  Identities=20%  Similarity=0.142  Sum_probs=132.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCC-CCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLP-RSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~-~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +.... ..+.++.+|++|+++++++++      
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999998652  11   12222 578999999999999998887      


Q ss_pred             -cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|+||||||+...         .|++++++|+.|++++++++.      +.|.....+       +++..++..... 
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~------~~m~~~~~g-------~iv~isS~~~~~-  152 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACL------DALIASGSG-------RVVLTSSITGPI-  152 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHSSC-------EEEEECCSBTTT-
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH------HHHHhcCCc-------EEEEEechhhcc-
Confidence             57999999997532         156789999999999999994      444322111       344444443210 


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc---ccc---eeeeeeeccCccc---e----ecccc-CCCcccHHHHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET---GDA---VFSGYVFTRGGYV---E----LSKKL-SLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~~---v~~g~~~~~~G~~---~----i~~~~-~~p~g~v~D~~~gi~l~  361 (437)
                      .+......|+.+|.+.+.+......+.   +..   +.++.+.++.-..   .    ..... ....+..+|++++++..
T Consensus       153 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L  232 (262)
T 3pk0_A          153 TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFL  232 (262)
T ss_dssp             BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            111235668888887776665444442   322   3333333321000   0    00111 11123678998888876


Q ss_pred             hc-----cCCcEEEEEcc
Q 013761          362 VG-----GNGRSYVLILE  374 (437)
Q Consensus       362 ~~-----~~Ge~y~l~l~  374 (437)
                      +.     -.|+.+.+.++
T Consensus       233 ~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          233 ATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCccccCCcCCEEEECCC
Confidence            62     35888877544

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.78  E-value=2.5e-18  Score=165.45  Aligned_cols=201  Identities=17%  Similarity=0.140  Sum_probs=126.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|+++++++++       ++|+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            678999999999999999999999999999999998652  2233444468899999999999999988       6799


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+...         .+++.+++|+.|++++++++.+      .|.....       .+++..++.......|  .
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~------~~~~~~~-------g~iv~isS~~~~~~~~--~  149 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK------PMKEAGR-------GSIINISSIEGLAGTV--A  149 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHTC-------EEEEEECCGGGTSCCT--T
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHhcCC-------CEEEEEeehhhcCCCC--C
Confidence            9999997532         2567899999999999888733      2221111       1233333332221112  2


Q ss_pred             cchhhhhhhhcccchhhhhcc---ccc---ceeeeeeeccCccce---eccccCCCcccHHHHHHHHHHHhc-----cCC
Q 013761          301 FQDVVAFKYDAGMDAKFELSE---TGD---AVFSGYVFTRGGYVE---LSKKLSLPLGCTLDRYEGLVLSVG-----GNG  366 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~---~~~---~v~~g~~~~~~G~~~---i~~~~~~p~g~v~D~~~gi~l~~~-----~~G  366 (437)
                      ...|+.+|.+.+.+......+   .+.   .+.++.+.++.....   .........+..+|++++++..+.     -.|
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G  229 (260)
T 1nff_A          150 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTG  229 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhhHHhCccCCCCCHHHHHHHHHHHhCccccCCcC
Confidence            345666666655544333222   222   223333333221100   000000112367899998887763     247


Q ss_pred             cEEEEEcc
Q 013761          367 RSYVLILE  374 (437)
Q Consensus       367 e~y~l~l~  374 (437)
                      +.|.+.++
T Consensus       230 ~~~~v~gG  237 (260)
T 1nff_A          230 AEFVVDGG  237 (260)
T ss_dssp             CEEEESTT
T ss_pred             CEEEECCC
Confidence            77777443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.78  E-value=2.1e-18  Score=163.67  Aligned_cols=195  Identities=13%  Similarity=0.045  Sum_probs=127.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++.       +|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            357899999999999999999999999999999998652  22223344689999999999999988874       599


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+...         .+++.+++|+.|++++++++      ++.|.... +       +++..++.......|  .
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~~-~-------~iv~isS~~~~~~~~--~  144 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQT------VRLIGERG-G-------VLANVLSSAAQVGKA--N  144 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHH------HHHHTTTC-E-------EEEEECCEECCSSCS--S
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcC-C-------EEEEEeCHHhcCCCC--C
Confidence            9999998532         15679999999999999999      44443221 1       345545443332223  3


Q ss_pred             cchhhhhhhhcccchhhhhccccc------ceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhccCCcEEE
Q 013761          301 FQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYV  370 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~Ge~y~  370 (437)
                      ...|+.+|.+...+......+...      .+.++.+.++..... ...........+|+++.++..+..+...|+
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~pedvA~~v~~l~~~~~~~~i  219 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT-DHVDPSGFMTPEDAAAYMLDALEARSSCHV  219 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------CBCHHHHHHHHHHHTCCCSSEEE
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc-CCCCCcCCCCHHHHHHHHHHHHhCCCCcce
Confidence            567888888877666544444322      233444433321000 000001123578888888888765555554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.78  E-value=9.1e-19  Score=169.87  Aligned_cols=203  Identities=15%  Similarity=0.106  Sum_probs=133.3

Q ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          156 IPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      +.+|.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++     
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345889999999999999999999999999999999998652  11   22335678999999999999999887     


Q ss_pred             --cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          226 --NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                        .+|+||||||+...         .|++.+++|+.|++++++++      ++.|.....+       +++..+++....
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iV~isS~~~~~  167 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREA------AKRMIPRGYG-------KIVNIGSLTSEL  167 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTS
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCc-------EEEEEccHHhCC
Confidence              46999999997532         15678999999999999998      3343322111       345545444332


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc-----eec-----cccCCCcccHHHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV-----ELS-----KKLSLPLGCTLDRYEGL  358 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~-----~i~-----~~~~~p~g~v~D~~~gi  358 (437)
                      ..|  ....|+.+|.+...+......+++   .   .+.++.+.++....     ...     .......+..+|+++++
T Consensus       168 ~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  245 (271)
T 4ibo_A          168 ARA--TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTA  245 (271)
T ss_dssp             BCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred             CCC--CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            222  356688888777666544444332   2   23333333322100     000     00111123577888888


Q ss_pred             HHHhc-----cCCcEEEEEc
Q 013761          359 VLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       359 ~l~~~-----~~Ge~y~l~l  373 (437)
                      +..+.     -.|+.+.+.+
T Consensus       246 ~~L~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          246 VFLSASASDYVNGQIIYVDG  265 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCccccCCCCcEEEECC
Confidence            76652     3478777743

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.78  E-value=4.7e-18  Score=165.76  Aligned_cols=239  Identities=15%  Similarity=0.062  Sum_probs=140.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCc-
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI-  240 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~-  240 (437)
                      |+|||||||||||++|+++|+++||+|+++.|++...       .   +..|    +...+.++++|+|||+||..... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------~---~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------R---ITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------E---EEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------e---eecc----hhhHhhccCCCEEEEeccCcccch
Confidence            5899999999999999999999999999999976421       1   1122    23345677899999999853211 


Q ss_pred             --------hhhHHHHHHHHHHHHHHHHHhcCCc---eeeeec-CCcchhhhhhhhhccCCCCcceeeccCcccchhhhhh
Q 013761          241 --------TGDLFRVDYQGVYNVTKAFQDFNNK---LAQLRA-GKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFK  308 (437)
Q Consensus       241 --------~~~~~~vNv~gt~~l~~aa~~~gvk---l~~l~~-~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk  308 (437)
                              ...++++|+.++.++++++...+++   +.+.++ ..|+...   ...+.+++       |....+.+...+
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~---~~~~~E~~-------p~~~~~~~~~~~  136 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSL---TAEYDEDS-------PGGDFDFFSNLV  136 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCS---SCCBCTTC-------CCSCSSHHHHHH
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCC---CCcccccC-------CccccchhHHHH
Confidence                    2457899999999999999988875   233332 2232111   01222221       111222222222


Q ss_pred             hhcccchhhhhcccccceeeeeeeccCccce-----ec----c---------ccCCCcccHHHHHHHHHHHhccC--CcE
Q 013761          309 YDAGMDAKFELSETGDAVFSGYVFTRGGYVE-----LS----K---------KLSLPLGCTLDRYEGLVLSVGGN--GRS  368 (437)
Q Consensus       309 ~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-----i~----~---------~~~~p~g~v~D~~~gi~l~~~~~--Ge~  368 (437)
                      ...+..  ......+...+..+....||...     ..    .         .......|++|++++++.++..+  ++.
T Consensus       137 ~~~e~~--~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~  214 (298)
T 4b4o_A          137 TKWEAA--ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGV  214 (298)
T ss_dssp             HHHHHH--HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEE
T ss_pred             HHHHHH--HHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCe
Confidence            222211  11223333333334333333110     00    0         00112238999999999988533  456


Q ss_pred             EEEEccCCCCCCCCcHHHHHHHHHhhhCCce-ecccCCCcccCC--------CCCCCCCHHHHhhccceeec
Q 013761          369 YVLILEAGPSADRSQSKLYFARFSTKVGFCR-VRVPFSSFRPVK--------PDDPPMDPFLVHTMTIRFEP  431 (437)
Q Consensus       369 y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~iP~~~~r~~~--------~~~~~ld~~ki~~~gi~fep  431 (437)
                      |++  ..+.   .+|++|+++.+++.+|.+. +++|...++..-        -....+.+.|+.++|+.|..
T Consensus       215 yn~--~~~~---~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~y  281 (298)
T 4b4o_A          215 LNG--VAPS---SATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSF  281 (298)
T ss_dssp             EEE--SCSC---CCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSC
T ss_pred             EEE--ECCC---ccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCC
Confidence            655  4443   5789999999999999432 345544333210        12335677899998888763

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.78  E-value=2.9e-18  Score=164.31  Aligned_cols=206  Identities=18%  Similarity=0.132  Sum_probs=129.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++...+.++.+|++|.++++++++       .+|+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            678999999999999999999999999999999998763  2333445678999999999999999887       5799


Q ss_pred             EEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          230 IIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       230 VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      ||||||+...             .|++.+++|+.|++++++++.+      .|....... +....+++..++.......
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~------~m~~~~~~~-~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAE------VMSQGEPDA-DGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHH------HHTTSCCCT-TSCCEEEEEECCTHHHHCC
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHH------HHHhccccC-CCCCeEEEEEechhhccCC
Confidence            9999997531             2567899999999999999944      443210000 0000135555555443322


Q ss_pred             cCcccchhhhhhhhcccchhhhhcc---ccc---ceeeeeeeccCcc--c-ee----ccccC--CCcccHHHHHHHHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSE---TGD---AVFSGYVFTRGGY--V-EL----SKKLS--LPLGCTLDRYEGLVLS  361 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~---~~~---~v~~g~~~~~~G~--~-~i----~~~~~--~p~g~v~D~~~gi~l~  361 (437)
                      |  ....|+.+|.+.+.+......+   .+.   .+.++.+.++...  . ..    .....  ...+..+|++++++..
T Consensus       158 ~--~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l  235 (257)
T 3tpc_A          158 I--GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHI  235 (257)
T ss_dssp             T--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHH
T ss_pred             C--CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            3  3567888888776665444333   222   2334444333210  0 00    01111  1234688888888876


Q ss_pred             hc---cCCcEEEEEc
Q 013761          362 VG---GNGRSYVLIL  373 (437)
Q Consensus       362 ~~---~~Ge~y~l~l  373 (437)
                      +.   -.|+.+.+.+
T Consensus       236 ~s~~~itG~~i~vdG  250 (257)
T 3tpc_A          236 CENTMLNGEVIRLDG  250 (257)
T ss_dssp             HHCTTCCSCEEEEST
T ss_pred             cccCCcCCcEEEECC
Confidence            63   3577777743

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.78  E-value=4.4e-18  Score=165.23  Aligned_cols=147  Identities=17%  Similarity=0.103  Sum_probs=104.4

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC-------------CcH--H---HHhhCCCCeEEEEecCCCHH
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK-------------ADQ--E---VVDMLPRSVEIVLGDVGDPC  218 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~-------------~~~--~---~~~~~~~~v~~v~~Dltd~~  218 (437)
                      .++++|++|||||+||||++++++|+++|++|++++|+             .+.  +   ........+.++.+|++|.+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            45889999999999999999999999999999999984             211  1   12233567899999999999


Q ss_pred             HHHHHHh-------cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhh
Q 013761          219 TLKAAVE-------NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLL  281 (437)
Q Consensus       219 ~v~~a~~-------~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~  281 (437)
                      +++++++       .+|+||||||+....         +++++++|+.|++++++++.      +.|.... .+      
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~------~~~~~~~~~g------  158 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATV------PAMIEAGNGG------  158 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHCSCE------
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH------HHHHhcCCCC------
Confidence            9999887       469999999985421         56789999999999999983      3332211 11      


Q ss_pred             hhhccCCCCcceeeccCcccchhhhhhhhcccchhhh
Q 013761          282 AKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       282 ~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                       +++..++.......|  ....|..+|.+...+....
T Consensus       159 -~iv~isS~~~~~~~~--~~~~Y~asKaa~~~~~~~l  192 (280)
T 3pgx_A          159 -SIVVVSSSAGLKATP--GNGHYSASKHGLTALTNTL  192 (280)
T ss_dssp             -EEEEECCGGGTSCCT--TBHHHHHHHHHHHHHHHHH
T ss_pred             -EEEEEcchhhccCCC--CchhHHHHHHHHHHHHHHH
Confidence             244444433322222  2455777776665554433

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.77  E-value=2.5e-18  Score=166.47  Aligned_cols=201  Identities=17%  Similarity=0.094  Sum_probs=130.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++++|++|||||+||||++++++|+++|++|++++|+...   +   .+......+.++.+|++|.++++++++      
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999999999999999999985432   1   122335678999999999999999887      


Q ss_pred             -cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|+||||||+...         .+++++++|+.|++++++++.      +.|.....+       +++..++......
T Consensus       105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~------~~~~~~~~g-------~iv~isS~~~~~~  171 (269)
T 4dmm_A          105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAA------KIMLKQRSG-------RIINIASVVGEMG  171 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHTCC-------EEEEECCHHHHHC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH------HHHHHcCCc-------EEEEECchhhcCC
Confidence             46999999998642         156789999999999999983      333221111       3444444333222


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccce----ecccc-CCCcccHHHHHHHHHHHhcc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVE----LSKKL-SLPLGCTLDRYEGLVLSVGG  364 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~----i~~~~-~~p~g~v~D~~~gi~l~~~~  364 (437)
                      .|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++.....    ..... ....+..+|++++++..+..
T Consensus       172 ~~--~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~  249 (269)
T 4dmm_A          172 NP--GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAAD  249 (269)
T ss_dssp             CT--TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHC
T ss_pred             CC--CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCC
Confidence            22  24567888877666554443332   22   233333333221000    00111 11234678999888776632


Q ss_pred             ------CCcEEEEEc
Q 013761          365 ------NGRSYVLIL  373 (437)
Q Consensus       365 ------~Ge~y~l~l  373 (437)
                            .|+.+.+.+
T Consensus       250 ~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          250 PAAAYITGQVINIDG  264 (269)
T ss_dssp             GGGGGCCSCEEEEST
T ss_pred             cccCCCcCCEEEECC
Confidence                  388887743

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.77  E-value=1.8e-18  Score=165.18  Aligned_cols=149  Identities=21%  Similarity=0.202  Sum_probs=108.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +....+...+.++.+|++|+++++++++       .+|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            4789999999999999999999999999999999998752  2333446688999999999999999887       469


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||+...         .|++.+++|+.|++++++++      ++.|.... .+       +++..++.......| 
T Consensus        83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~~~~~~~~g-------~iv~isS~~~~~~~~-  148 (247)
T 3rwb_A           83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAG------TDQMRAAGKAG-------RVISIASNTFFAGTP-  148 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCCE-------EEEEECCTHHHHTCT-
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHcCCCc-------EEEEECchhhccCCC-
Confidence            99999997532         15678999999999999997      33333211 11       344444433322222 


Q ss_pred             cccchhhhhhhhcccchhhhhcc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                       ....|..+|.+...+......+
T Consensus       149 -~~~~Y~asKaa~~~~~~~la~e  170 (247)
T 3rwb_A          149 -NMAAYVAAKGGVIGFTRALATE  170 (247)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CchhhHHHHHHHHHHHHHHHHH
Confidence             2456777777666555443333

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.77  E-value=2.9e-18  Score=163.15  Aligned_cols=201  Identities=14%  Similarity=0.091  Sum_probs=131.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIY  232 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh  232 (437)
                      ++.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++   .+|+|||
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            4788999999999999999999999999999999998652  2333445688999999999999999998   4699999


Q ss_pred             eccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          233 CATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       233 ~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      |||+...         .+++.+++|+.|++++++++      ++.|.....+       +++..++.......|  ....
T Consensus        91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~~~~--~~~~  155 (249)
T 3f9i_A           91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREA------IKKMIQKRYG-------RIINISSIVGIAGNP--GQAN  155 (249)
T ss_dssp             CCC-------------CHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCCCC--CCS--CSHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHhCCCc-------EEEEEccHHhccCCC--CCch
Confidence            9997532         26779999999999999998      3333221111       355555544333223  3567


Q ss_pred             hhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccce-------eccc-cCCCcccHHHHHHHHHHHhc-----c
Q 013761          304 VVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYVE-------LSKK-LSLPLGCTLDRYEGLVLSVG-----G  364 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~~-------i~~~-~~~p~g~v~D~~~gi~l~~~-----~  364 (437)
                      |+.+|.+.+.+......+..   .   .+.++.+.++.....       .... .....++.+|++++++..+.     -
T Consensus       156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  235 (249)
T 3f9i_A          156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI  235 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence            88888877766654444332   2   222333332211000       0000 01122358899999887763     2


Q ss_pred             CCcEEEEEc
Q 013761          365 NGRSYVLIL  373 (437)
Q Consensus       365 ~Ge~y~l~l  373 (437)
                      .|+.+.+.+
T Consensus       236 tG~~~~vdg  244 (249)
T 3f9i_A          236 TGQTLHVNG  244 (249)
T ss_dssp             CSCEEEEST
T ss_pred             cCcEEEECC
Confidence            478777743

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.77  E-value=3.4e-18  Score=166.56  Aligned_cols=149  Identities=15%  Similarity=0.133  Sum_probs=105.9

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHH---hhC-CCCeEEEEecCCCHHHHHHHHh----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVV---DML-PRSVEIVLGDVGDPCTLKAAVE----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~---~~~-~~~v~~v~~Dltd~~~v~~a~~----  225 (437)
                      .+|++|++|||||+||||++++++|+++|++|++++|+...   ...   ... ...+.++.+|++|.++++++++    
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34788999999999999999999999999999999995432   111   122 4578999999999999999887    


Q ss_pred             ---cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 ---NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                         .+|+||||||+....         +++.+++|+.|++++++++      ++.|.....+       +++..++....
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~  167 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGA------IPPMKKKGWG-------RIINIASAHGL  167 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGT
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------EEEEECCcccc
Confidence               469999999985321         5678999999999999998      3333322111       34444444332


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhc
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                      ...|  ....|+.+|.+.+.+......
T Consensus       168 ~~~~--~~~~Y~asKaa~~~l~~~la~  192 (281)
T 3v2h_A          168 VASP--FKSAYVAAKHGIMGLTKTVAL  192 (281)
T ss_dssp             SCCT--TCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCC--CchHHHHHHHHHHHHHHHHHH
Confidence            2222  245677777766655543333

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.77  E-value=3.7e-18  Score=164.07  Aligned_cols=197  Identities=17%  Similarity=0.172  Sum_probs=133.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~VI  231 (437)
                      |+|+||||||++|||++++++|+++|++|++++|+.+. +.......++.++++|++|+++++++++.       +|+||
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999998653 22233345788999999999999988864       49999


Q ss_pred             EeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          232 YCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       232 h~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ||||+....         |++++++|+.|++++++++      ++.|.... |       .+++.+|+......|+  ..
T Consensus        81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~~~m~~~~-G-------~IInisS~~~~~~~~~--~~  144 (247)
T 3ged_A           81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLC------RDELIKNK-G-------RIINIASTRAFQSEPD--SE  144 (247)
T ss_dssp             ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTT-C-------EEEEECCGGGTSCCTT--CH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHhhcC-C-------cEEEEeecccccCCCC--CH
Confidence            999975432         6789999999999999999      55554322 2       4667676665444444  56


Q ss_pred             hhhhhhhhcccchhhhhccccc-----ceeeeeeeccCccceecccc--CCCc---ccHHHHHHHHHHHhc---cCCcEE
Q 013761          303 DVVAFKYDAGMDAKFELSETGD-----AVFSGYVFTRGGYVELSKKL--SLPL---GCTLDRYEGLVLSVG---GNGRSY  369 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~-----~v~~g~~~~~~G~~~i~~~~--~~p~---g~v~D~~~gi~l~~~---~~Ge~y  369 (437)
                      .|..+|.+...+......+.+.     .+.+|.+.++... ......  ..|.   +..+|++++++..+.   -.|+..
T Consensus       145 ~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~-~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~~~iTG~~i  223 (247)
T 3ged_A          145 AYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ-EFTQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETI  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC----CCHHHHHTSTTSSCBCHHHHHHHHHHHHHCSSCCSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHHhCCCCCCCeE
Confidence            6888887766655444444432     2333333222110 000000  1232   357788887776663   247766


Q ss_pred             EEEc
Q 013761          370 VLIL  373 (437)
Q Consensus       370 ~l~l  373 (437)
                      .+.+
T Consensus       224 ~VDG  227 (247)
T 3ged_A          224 IVDG  227 (247)
T ss_dssp             EEST
T ss_pred             EECc
Confidence            6643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.77  E-value=1.5e-18  Score=173.03  Aligned_cols=210  Identities=11%  Similarity=0.028  Sum_probs=142.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHHH---hh-CCCCeEEEEecCCCHHHHHHHHh--cccEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVV---DM-LPRSVEIVLGDVGDPCTLKAAVE--NCNKI  230 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~~---~~-~~~~v~~v~~Dltd~~~v~~a~~--~~D~V  230 (437)
                      |.+|+||||||||+||++|++.|++.|++|++++|+..  ....   .. ...++.++.+|++|.+++.++++  ++|+|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            45679999999999999999999999999999999862  1111   11 13578999999999999999999  99999


Q ss_pred             EEeccCCCCchhhHHHHHHHHHHHHHHHHHhcC-Cceeeeec--------------CCcchhhhhhhhhccCCCCcceee
Q 013761          231 IYCATARSTITGDLFRVDYQGVYNVTKAFQDFN-NKLAQLRA--------------GKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       231 Ih~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~g-vkl~~l~~--------------~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      ||+||..          |+.++.++++++++.+ ++....+.              ..|+.+|..+++++...+++++++
T Consensus        88 i~~a~~~----------n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tiv  157 (346)
T 3i6i_A           88 VSTVGGE----------SILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYI  157 (346)
T ss_dssp             EECCCGG----------GGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEE
T ss_pred             EECCchh----------hHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEE
Confidence            9999862          8889999999999999 87433221              123456677777777788888899


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEE
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLI  372 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~  372 (437)
                      ||+.++..+.....   .... .....+.    ..+.+.   ....    ....+++|++++++.++..   .++.|.+.
T Consensus       158 rpg~~~g~~~~~~~---~~~~-~~~~~~~----~~~~g~---g~~~----~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~  222 (346)
T 3i6i_A          158 CCNSIASWPYYNNI---HPSE-VLPPTDF----FQIYGD---GNVK----AYFVAGTDIGKFTMKTVDDVRTLNKSVHFR  222 (346)
T ss_dssp             ECCEESSCCCSCC---------CCCCSSC----EEEETT---SCCC----EEEECHHHHHHHHHHHTTCGGGTTEEEECC
T ss_pred             EecccccccCcccc---cccc-ccCCCce----EEEccC---CCce----EEecCHHHHHHHHHHHHhCccccCeEEEEe
Confidence            98866543211000   0000 0000000    011111   1111    1123699999999999853   25656553


Q ss_pred             ccCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          373 LEAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       373 l~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                       +.+   +.+++.|+++.+.+.+|.
T Consensus       223 -g~~---~~~s~~e~~~~~~~~~g~  243 (346)
T 3i6i_A          223 -PSC---NCLNINELASVWEKKIGR  243 (346)
T ss_dssp             -CGG---GEECHHHHHHHHHHHHTS
T ss_pred             -CCC---CCCCHHHHHHHHHHHHCC
Confidence             222   257899999999999984

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.77  E-value=3.7e-18  Score=164.19  Aligned_cols=201  Identities=16%  Similarity=0.140  Sum_probs=130.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhcc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVENC-----  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~~-----  227 (437)
                      +.+|++|||||+||||++++++|+++|++|+++ +|+.+.  +   .+......+.++.+|++|.++++++++.+     
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999997 666542  1   12233567899999999999999988754     


Q ss_pred             --cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          228 --NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       228 --D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                        |+||||||+....         |++.+++|+.|++++++++      ++.|.....+       +++..++.....  
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~m~~~~~g-------~iv~isS~~~~~--  146 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEA------AKLMEKNGGG-------HIVSISSLGSIR--  146 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHTTTCE-------EEEEEEEGGGTS--
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCc-------EEEEECchhhCC--
Confidence              9999999974321         5678999999999999999      4444332222       344444443322  


Q ss_pred             cCcccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCccce-----ec----c-ccCCCcccHHHHHHHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYVE-----LS----K-KLSLPLGCTLDRYEGLVL  360 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~~-----i~----~-~~~~p~g~v~D~~~gi~l  360 (437)
                      +......|+.+|.+.+.+......+++.      .+.++.+.++.....     ..    . ......+..+|++++++.
T Consensus       147 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~  226 (258)
T 3oid_A          147 YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEF  226 (258)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            2223567888888777666544444322      233333333211000     00    0 001112468899999887


Q ss_pred             Hhc-----cCCcEEEEEcc
Q 013761          361 SVG-----GNGRSYVLILE  374 (437)
Q Consensus       361 ~~~-----~~Ge~y~l~l~  374 (437)
                      .+.     -.|+.+.+.++
T Consensus       227 L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          227 LVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             HTSSTTTTCCSCEEEESTT
T ss_pred             HhCcccCCccCCEEEECCC
Confidence            773     24787777443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.77  E-value=2.3e-18  Score=166.90  Aligned_cols=202  Identities=16%  Similarity=0.138  Sum_probs=130.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++       
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4788999999999999999999999999999999998652  11   22234578899999999999998887       


Q ss_pred             cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          226 NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      .+|+||||||+....         |++++++|+.|++++++++.      +.|.....+       +++..++.......
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~------~~~~~~~~g-------~iv~isS~~~~~~~  171 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVL------RPMMKARGG-------RIVNITSVVGSAGN  171 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHTCE-------EEEEECCHHHHHCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH------HHHHHcCCC-------EEEEECchhhCCCC
Confidence            469999999975421         56789999999999999984      333221111       34444443332222


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCcc--ce-----ecccc-CCCcccHHHHHHHHHHHh
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGY--VE-----LSKKL-SLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~--~~-----i~~~~-~~p~g~v~D~~~gi~l~~  362 (437)
                      |  ....|+.+|.+...+......+++   .   .+.++.+.++...  ..     ..... ....+..+|++++++..+
T Consensus       172 ~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  249 (270)
T 3ftp_A          172 P--GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLA  249 (270)
T ss_dssp             T--TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             C--CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            2  245677777776665544443332   2   2222222221100  00     00000 111236789999888766


Q ss_pred             c-----cCCcEEEEEcc
Q 013761          363 G-----GNGRSYVLILE  374 (437)
Q Consensus       363 ~-----~~Ge~y~l~l~  374 (437)
                      .     -.|+.+.+.++
T Consensus       250 s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          250 SPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCCcCCccCcEEEECCC
Confidence            2     25887877443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.77  E-value=6.4e-18  Score=164.93  Aligned_cols=201  Identities=21%  Similarity=0.151  Sum_probs=131.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+   .....+.++.+|++|+++++++++       .
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999999999999999998652  2222   234578999999999999998887       4


Q ss_pred             ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 ~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      +|+||||||+...          .|++.+++|+.|++++++++      ++.|.....+       +++..+++......
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~Iv~isS~~~~~~~  172 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLT------VPYLKQRGGG-------AIVVVSSINGTRTF  172 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCSBTTTBC
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCc-------eEEEEcChhhccCC
Confidence            6999999997532          15678999999999999999      4444322211       34555544332211


Q ss_pred             cCcccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCccce-----e-----cccc--CCC-----cccHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYVE-----L-----SKKL--SLP-----LGCTLD  353 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~~-----i-----~~~~--~~p-----~g~v~D  353 (437)
                      +......|+.+|.+...+......+.+.      .+.++.+.++.....     .     ...+  ..|     .+..+|
T Consensus       173 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~ped  252 (283)
T 3v8b_A          173 TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSED  252 (283)
T ss_dssp             CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHH
Confidence            2223566888888777666544444321      234444433321000     0     0000  011     236789


Q ss_pred             HHHHHHHHhc-----cCCcEEEEE
Q 013761          354 RYEGLVLSVG-----GNGRSYVLI  372 (437)
Q Consensus       354 ~~~gi~l~~~-----~~Ge~y~l~  372 (437)
                      ++++++..+.     -.|+.+.+.
T Consensus       253 vA~~v~fL~s~~a~~itG~~i~vd  276 (283)
T 3v8b_A          253 VAELIRFLVSERARHVTGSPVWID  276 (283)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHcCccccCCcCCEEEEC
Confidence            9988887763     247777674

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.77  E-value=6.1e-18  Score=162.41  Aligned_cols=201  Identities=15%  Similarity=0.096  Sum_probs=136.5

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.++..+.++.+|++|.++++++++       .+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            34789999999999999999999999999999999998652  2233345678999999999999998876       45


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||+....         +++.+++|+.|++++++++      ++.|...  +       +++..++.......| 
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~~~~~--g-------~iv~isS~~~~~~~~-  147 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRL------TPLIREG--G-------SIVFTSSVADEGGHP-  147 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------GGGEEEE--E-------EEEEECCGGGSSBCT-
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH------HHHHhcC--C-------EEEEECChhhcCCCC-
Confidence            9999999985421         5678999999999999999      5555321  1       456656554433333 


Q ss_pred             cccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCcc----ce-ec---------cccCCCcccHHHHHHHH
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGY----VE-LS---------KKLSLPLGCTLDRYEGL  358 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~----~~-i~---------~~~~~p~g~v~D~~~gi  358 (437)
                       ....|..+|.+...+......+.   +.   .+.++.+.++...    .. ..         .......+..+|+++++
T Consensus       148 -~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  226 (255)
T 4eso_A          148 -GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAV  226 (255)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence             35678888887776665444443   22   3344444443210    00 00         00111123678888888


Q ss_pred             HHHhc----cCCcEEEEEcc
Q 013761          359 VLSVG----GNGRSYVLILE  374 (437)
Q Consensus       359 ~l~~~----~~Ge~y~l~l~  374 (437)
                      +..+.    -.|+.+.+.++
T Consensus       227 ~~L~s~~~~itG~~i~vdGG  246 (255)
T 4eso_A          227 LFLAFEATFTTGAKLAVDGG  246 (255)
T ss_dssp             HHHHHTCTTCCSCEEEESTT
T ss_pred             HHHcCcCcCccCCEEEECCC
Confidence            76652    24777777544

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.77  E-value=4.7e-18  Score=164.40  Aligned_cols=147  Identities=20%  Similarity=0.228  Sum_probs=107.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VI  231 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+. ........+.++.+|++|.++++++++       .+|+||
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-LKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH-HHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            678999999999999999999999999999999998653 222223478899999999999998887       569999


Q ss_pred             EeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          232 YCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       232 h~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ||||+...         .|++++++|+.|++++++++      ++.|.....+       +++..++.......|  ...
T Consensus        93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~~~~g-------~IV~isS~~~~~~~~--~~~  157 (266)
T 3p19_A           93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAV------LAPMKARNCG-------TIINISSIAGKKTFP--DHA  157 (266)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCC-------EEEEECCGGGTSCCT--TCH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCc-------EEEEEcChhhCCCCC--CCc
Confidence            99997532         15678999999999999988      4444322111       355555544332223  356


Q ss_pred             hhhhhhhhcccchhhhhcc
Q 013761          303 DVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~  321 (437)
                      .|+.+|.+...+......+
T Consensus       158 ~Y~asK~a~~~~~~~la~e  176 (266)
T 3p19_A          158 AYCGTKFAVHAISENVREE  176 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHH
Confidence            6888887776665444444

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.77  E-value=3.2e-18  Score=166.93  Aligned_cols=204  Identities=18%  Similarity=0.102  Sum_probs=135.2

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHh------
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.   ....+.++.+|++|+++++++++      
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999998652  22222   24578999999999999998887      


Q ss_pred             -cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          226 -NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                       .+|+||||||+...          .+++.+++|+.|++++++++      ++.|.....+       +++..++.....
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~  150 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQ------VPAIAALGGG-------SLTFTSSFVGHT  150 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEEECCSBTTT
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------EEEEEcChhhCc
Confidence             46999999997532          15679999999999999998      4444332222       344444443221


Q ss_pred             eccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCcccee---c--------cc-cCCCcccHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVEL---S--------KK-LSLPLGCTLDRYE  356 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~i---~--------~~-~~~p~g~v~D~~~  356 (437)
                       .+......|+.+|.+...+......++   +.   .+.++.+.++......   .        .. .....+..+|+++
T Consensus       151 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  229 (280)
T 3tox_A          151 -AGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAE  229 (280)
T ss_dssp             -BCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHH
Confidence             111235668888887776665444443   22   2334444433211100   0        00 0011346889999


Q ss_pred             HHHHHhc-----cCCcEEEEEcc
Q 013761          357 GLVLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       357 gi~l~~~-----~~Ge~y~l~l~  374 (437)
                      +++..+.     -.|+.+.+.++
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG  252 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGG  252 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCccccCCcCcEEEECCC
Confidence            9887763     34888877544

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.77  E-value=1.6e-18  Score=169.00  Aligned_cols=148  Identities=20%  Similarity=0.159  Sum_probs=117.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..++++..+..+++|++|+++++++++.       +|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            889999999999999999999999999999999998762  34455677889999999999999988875       499


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+...         .|++++++|+.|++++++++      ++.|...  |       .+++.+++......|+  
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~------~p~m~~~--G-------~IInisS~~~~~~~~~--  169 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKA------LPLLARG--S-------SVVLTGSTAGSTGTPA--  169 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHH------TTTEEEE--E-------EEEEECCGGGGSCCTT--
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHH------HHHHhhC--C-------eEEEEeehhhccCCCC--
Confidence            9999997532         27889999999999999999      7777532  2       4666676665444443  


Q ss_pred             cchhhhhhhhcccchhhhhcccc
Q 013761          301 FQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      ...|..+|.+...+......+++
T Consensus       170 ~~~Y~asKaav~~ltr~lA~Ela  192 (273)
T 4fgs_A          170 FSVYAASKAALRSFARNWILDLK  192 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chHHHHHHHHHHHHHHHHHHHhc
Confidence            56788888877666554444443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.77  E-value=3.6e-18  Score=165.46  Aligned_cols=204  Identities=15%  Similarity=0.114  Sum_probs=143.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      |+||||||||+||++|+++|++. |++|++++|+.+.. ......+++++.+|++|++++.++++++|+|||+||.....
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   79 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPS   79 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccc
Confidence            47999999999999999999998 99999999987531 11124579999999999999999999999999999875432


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC------Ccchhh--hhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          241 TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG------KSSKSK--LLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       241 ~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~------~~g~sk--~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                           ..|+.++.++++++++.+++ +.++++.      .+..++  ...+..+...++.++++||+.++++... ... 
T Consensus        80 -----~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~-~~~-  152 (289)
T 3e48_A           80 -----FKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKP-YLP-  152 (289)
T ss_dssp             -----HHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEEEEEECEESTTHHH-HHH-
T ss_pred             -----hhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEEEEeccccccccHH-HHH-
Confidence                 35889999999999999986 5555531      111111  2334556677899999999977654321 000 


Q ss_pred             ccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHH
Q 013761          312 GMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYF  388 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~  388 (437)
                            .....+      ....+.|  ....    +..+++|++++++.++..   .|+.|++.   +.   .+++.|++
T Consensus       153 ------~~~~~~------~~~~~~g--~~~~----~~i~~~Dva~~~~~~l~~~~~~g~~~~~~---~~---~~s~~e~~  208 (289)
T 3e48_A          153 ------ELMNMH------KLIYPAG--DGRI----NYITRNDIARGVIAIIKNPDTWGKRYLLS---GY---SYDMKELA  208 (289)
T ss_dssp             ------HHHHHT------EECCCCT--TCEE----EEECHHHHHHHHHHHHHCGGGTTCEEEEC---CE---EEEHHHHH
T ss_pred             ------HHHHCC------CEecCCC--Ccee----eeEEHHHHHHHHHHHHcCCCcCCceEEeC---CC---cCCHHHHH
Confidence                  000000      0111111  1111    123689999999988842   27788774   22   47899999


Q ss_pred             HHHHhhhCC
Q 013761          389 ARFSTKVGF  397 (437)
Q Consensus       389 ~~i~~~~G~  397 (437)
                      +.+.+.+|.
T Consensus       209 ~~~~~~~g~  217 (289)
T 3e48_A          209 AILSEASGT  217 (289)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            999999994

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.77  E-value=2.1e-18  Score=167.49  Aligned_cols=194  Identities=18%  Similarity=0.121  Sum_probs=125.3

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      ..+.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++...+.++.+|++|+++++++++       .+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            34778999999999999999999999999999999998652  2334445688999999999999999887       57


Q ss_pred             cEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          228 NKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       228 D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      |+||||||+...          .|++.+++|+.|++++++++      ++.|......     ..+++..+++......|
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~~~~~-----~g~IV~isS~~~~~~~~  172 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEA------FRVMKAQEPR-----GGRIINNGSISATSPRP  172 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHSSSC-----CEEEEEECCSSTTSCCT
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHH------HHHHHhCCCC-----CcEEEEECchhhcCCCC
Confidence            999999998532          15678999999999999999      4444332100     01455555554433233


Q ss_pred             Ccccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc--e----ec-cccCCCcccHHHHHHHHHHHhc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV--E----LS-KKLSLPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~--~----i~-~~~~~p~g~v~D~~~gi~l~~~  363 (437)
                        ....|+.+|.+.+.+......+.+   .   .+.++.+.++....  .    .. .....+.+..+|++++++..+.
T Consensus       173 --~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s  249 (272)
T 4dyv_A          173 --YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMAS  249 (272)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHH
T ss_pred             --CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhC
Confidence              356788888887766654444432   2   23344443332100  0    00 0001123367788888877764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.77  E-value=4.5e-18  Score=161.58  Aligned_cols=200  Identities=14%  Similarity=0.062  Sum_probs=131.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.  +   ........+.++.+|++|.++++++++.       
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  1   1223356789999999999999998875       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+||||||+....         +++.+++|+.|++++++++.+      .|.....+       +++..++.......|
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~g-------~iv~isS~~~~~~~~  149 (247)
T 3lyl_A           83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVR------GMMKKRWG-------RIISIGSVVGSAGNP  149 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHTCE-------EEEEECCTHHHHCCT
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH------HHHHcCCe-------EEEEEcchhhccCCC
Confidence            59999999986431         567899999999999999833      33221111       344444443322222


Q ss_pred             Ccccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccce-------ecc-ccCCCcccHHHHHHHHHHHhc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYVE-------LSK-KLSLPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~~-------i~~-~~~~p~g~v~D~~~gi~l~~~  363 (437)
                        ....|+.+|.+.+.+......++.   .   .+.++.+.++.....       ... ......++.+|++++++..+.
T Consensus       150 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s  227 (247)
T 3lyl_A          150 --GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLAS  227 (247)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHS
T ss_pred             --CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhC
Confidence              356688888776666544444332   2   223333333221000       000 011122368899998887763


Q ss_pred             -----cCCcEEEEEc
Q 013761          364 -----GNGRSYVLIL  373 (437)
Q Consensus       364 -----~~Ge~y~l~l  373 (437)
                           -.|+.+.+.+
T Consensus       228 ~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          228 EEAKYITGQTLHVNG  242 (247)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             CCcCCccCCEEEECC
Confidence                 2478777743

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.77  E-value=4.9e-18  Score=163.13  Aligned_cols=103  Identities=18%  Similarity=0.219  Sum_probs=86.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC----CCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML----PRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~----~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+    +.++.++.+|++|+++++++++       
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999998652  111222    4578899999999999999887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ++|+||||||+...         .+++.+++|+.|++++++++.+
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  129 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVP  129 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            57999999997532         1567899999999999998843

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.77  E-value=4.3e-18  Score=164.82  Aligned_cols=104  Identities=20%  Similarity=0.232  Sum_probs=87.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC------------cH--H---HHhhCCCCeEEEEecCCCHHHH
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA------------DQ--E---VVDMLPRSVEIVLGDVGDPCTL  220 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~------------~~--~---~~~~~~~~v~~v~~Dltd~~~v  220 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.            +.  +   ........+.++.+|++|++++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            47899999999999999999999999999999999872            11  1   1122356899999999999999


Q ss_pred             HHHHh-------cccEEEEeccCCCC-----chhhHHHHHHHHHHHHHHHHHh
Q 013761          221 KAAVE-------NCNKIIYCATARST-----ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       221 ~~a~~-------~~D~VIh~Ag~~~~-----~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +++++       .+|+||||||+...     .|++++++|+.|++++++++.+
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  142 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIP  142 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99887       56999999998643     2677999999999999999843

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.77  E-value=8.6e-18  Score=160.31  Aligned_cols=103  Identities=18%  Similarity=0.233  Sum_probs=86.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.+|+||||||+||||++++++|+++|++|++++|+.+.  ..   +.....++.++.+|++|.++++++++       .
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  11   22234578999999999999999887       5


Q ss_pred             ccEEEEeccCCC-C---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARS-T---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~-~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||+.. .         .+++.+++|+.|++++++++.+
T Consensus        91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  135 (260)
T 3awd_A           91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR  135 (260)
T ss_dssp             CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            799999999754 1         1466899999999999999854

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.76  E-value=7e-18  Score=161.94  Aligned_cols=202  Identities=18%  Similarity=0.174  Sum_probs=132.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +|++|++|||||+||||++++++|+++|++|++++|+.+.  +...   ..+..+.++.+|++|+++++++++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3788999999999999999999999999999999998752  2222   234578999999999999999887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeee-cCCcchhhhhhhhhccCCCCcceee
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLR-AGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~-~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      .+|+||||||+...         .|++.+++|+.|++++++++      ++.|. ....+       +++..++......
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~------~~~~~~~~~~g-------~iv~isS~~~~~~  149 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAI------GKYWIEKGIKG-------NIINMVATYAWDA  149 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHTCCC-------EEEEECCGGGGSC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhhCCCc-------EEEEECchhhccC
Confidence            46999999996432         15678999999999999998      33331 11111       3444444433322


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc----cc---ceeeeeeeccCccc------eecccc--CCC---cccHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET----GD---AVFSGYVFTRGGYV------ELSKKL--SLP---LGCTLDRYEG  357 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~----~~---~v~~g~~~~~~G~~------~i~~~~--~~p---~g~v~D~~~g  357 (437)
                      .|  ....|..+|.+...+......+.    +.   .+.++.+.++....      .....+  ..|   .+..+|++++
T Consensus       150 ~~--~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  227 (257)
T 3imf_A          150 GP--GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGL  227 (257)
T ss_dssp             CT--TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHH
T ss_pred             CC--CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            23  35568888877666554433332    32   23344443332110      000000  112   2367899998


Q ss_pred             HHHHhc-----cCCcEEEEEcc
Q 013761          358 LVLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       358 i~l~~~-----~~Ge~y~l~l~  374 (437)
                      ++..+.     -.|+.+.+.++
T Consensus       228 v~~L~s~~~~~itG~~i~vdGG  249 (257)
T 3imf_A          228 AYYLCSDEAAYINGTCMTMDGG  249 (257)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHcCchhcCccCCEEEECCC
Confidence            887763     25887777443

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.76  E-value=2.6e-18  Score=164.75  Aligned_cols=149  Identities=15%  Similarity=0.140  Sum_probs=110.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE------NC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~------~~  227 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +...+..+.++.+|++|.++++++++      .+
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            678999999999999999999999999999999998762  22   22335678999999999999999987      46


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||+....         +++.+++|+.|++++++++      ++.|.....+       +++..++.......| 
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~~~~~~~g-------~iv~isS~~~~~~~~-  150 (252)
T 3h7a_A           85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRES------ARLMLAHGQG-------KIFFTGATASLRGGS-  150 (252)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEEEEGGGTCCCT-
T ss_pred             eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCc-------EEEEECCHHHcCCCC-
Confidence            9999999975421         5678999999999999998      4444322211       344444443322223 


Q ss_pred             cccchhhhhhhhcccchhhhhccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                       ....|+.+|.+...+......+.
T Consensus       151 -~~~~Y~asKaa~~~l~~~la~e~  173 (252)
T 3h7a_A          151 -GFAAFASAKFGLRAVAQSMAREL  173 (252)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHh
Confidence             35668888887776665444443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.76  E-value=2e-18  Score=165.76  Aligned_cols=200  Identities=21%  Similarity=0.235  Sum_probs=137.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIY  232 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh  232 (437)
                      +|+||++|||||++|||++++++|+++|++|++.+|+..++   .......++.++.+|++|+++++++++.  +|+|||
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN   85 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN   85 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            38999999999999999999999999999999999987543   2344567889999999999998887764  699999


Q ss_pred             eccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          233 CATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       233 ~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      |||+...         .|++++++|+.|++++++++      ++.|... ..|       ++++.+|+......|+  ..
T Consensus        86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~------~~~m~~~g~~G-------~IVnisS~~~~~g~~~--~~  150 (247)
T 4hp8_A           86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAF------AKELLAKGRSG-------KVVNIASLLSFQGGIR--VP  150 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCCE-------EEEEECCGGGTSCCSS--CH
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHH------HHHHHHhCCCc-------EEEEEechhhCCCCCC--Ch
Confidence            9998542         27889999999999999998      5665432 233       5777777665544443  45


Q ss_pred             hhhhhhhhcccchhhhhcccc------cceeeeeeeccCccc---e--ecccc--CCCc---ccHHHHHHHHHHHhc---
Q 013761          303 DVVAFKYDAGMDAKFELSETG------DAVFSGYVFTRGGYV---E--LSKKL--SLPL---GCTLDRYEGLVLSVG---  363 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~------~~v~~g~~~~~~G~~---~--i~~~~--~~p~---g~v~D~~~gi~l~~~---  363 (437)
                      .|..+|.+...+......+++      +.+.++.+.++.-..   .  ....+  ..|+   +..+|++.+++..+.   
T Consensus       151 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a  230 (247)
T 4hp8_A          151 SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence            688888776655544444433      234455554432100   0  00000  1222   356677777665552   


Q ss_pred             --cCCcEEEEE
Q 013761          364 --GNGRSYVLI  372 (437)
Q Consensus       364 --~~Ge~y~l~  372 (437)
                        -.|+...+.
T Consensus       231 ~~iTG~~i~VD  241 (247)
T 4hp8_A          231 DYVHGAILNVD  241 (247)
T ss_dssp             TTCCSCEEEES
T ss_pred             cCCcCCeEEEC
Confidence              247766663

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.76  E-value=1e-18  Score=168.73  Aligned_cols=150  Identities=19%  Similarity=0.100  Sum_probs=115.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +|+||++|||||++|||++++++|+++|++|++.+|+.+.  +.   +.....++.++++|++|+++++++++.      
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            4789999999999999999999999999999999998652  22   233456789999999999999988875      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceee
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       +|+||||||+....         |++++++|+.|++++++++      ++.|... ..|       ++++.+++.....
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~p~m~~~~~~G-------~IVnisS~~~~~~  152 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSA------AKRMIARNSGG-------KIINIGSLTSQAA  152 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCCE-------EEEEECCGGGTSB
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHccCCC-------EEEEEeehhhcCC
Confidence             49999999975422         7789999999999999999      6666432 222       5777777666544


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|+  ...|..+|.+...+......+.
T Consensus       153 ~~~--~~~Y~asKaal~~ltr~lA~el  177 (255)
T 4g81_D          153 RPT--VAPYTAAKGGIKMLTCSMAAEW  177 (255)
T ss_dssp             CTT--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--chhHHHHHHHHHHHHHHHHHHh
Confidence            444  5668888877665554444443

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.76  E-value=7e-18  Score=165.70  Aligned_cols=204  Identities=21%  Similarity=0.162  Sum_probs=131.7

Q ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC---C-CCeEEEEecCCCHHHHHHHHhc---
Q 013761          156 IPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML---P-RSVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~---~-~~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      +.++.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+++   . ..+.++.+|++|.++++++++.   
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998762  222222   2 4789999999999999888874   


Q ss_pred             ----ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          227 ----CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                          +|+||||||+...         .|++.+++|+.|++++++++      ++.|.....+       +++..++....
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~iV~isS~~~~  182 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQAC------LAPLTASGRG-------RVILTSSITGP  182 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHT------HHHHHHHSSC-------EEEEECCSBTT
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------EEEEEeChhhc
Confidence                5999999997532         15678999999999999998      3333322111       34444444321


Q ss_pred             -eeccCcccchhhhhhhhcccchhhhhccc---ccc---eeeeeeeccCcc--c-e----ecccc-CCCcccHHHHHHHH
Q 013761          294 -EVRQGTYFQDVVAFKYDAGMDAKFELSET---GDA---VFSGYVFTRGGY--V-E----LSKKL-SLPLGCTLDRYEGL  358 (437)
Q Consensus       294 -i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~~---v~~g~~~~~~G~--~-~----i~~~~-~~p~g~v~D~~~gi  358 (437)
                       ...|  ....|+.+|.+...+......+.   +..   +.++.+.++...  . .    ..... ....+..+|+++++
T Consensus       183 ~~~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  260 (293)
T 3rih_A          183 VTGYP--GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLA  260 (293)
T ss_dssp             TBBCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             cCCCC--CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence             1122  24568888877766654443332   222   333333332110  0 0    00111 11123578888888


Q ss_pred             HHHhc-----cCCcEEEEEcc
Q 013761          359 VLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       359 ~l~~~-----~~Ge~y~l~l~  374 (437)
                      +..+.     -.|+.+.+.++
T Consensus       261 ~fL~s~~a~~itG~~i~vdGG  281 (293)
T 3rih_A          261 AFLATDEAGYITGQAIVVDGG  281 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCccccCCCCCEEEECCC
Confidence            77662     35787877544

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.76  E-value=6.8e-18  Score=163.89  Aligned_cols=201  Identities=20%  Similarity=0.163  Sum_probs=130.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HH---HhhCCCCeEEEEecCCCHHHHHHHHh------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EV---VDMLPRSVEIVLGDVGDPCTLKAAVE------NC  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~---~~~~~~~v~~v~~Dltd~~~v~~a~~------~~  227 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+... +.   +......+.++.+|++|.++++++.+      .+
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999999976542 12   22334578999999999999988765      57


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||+....         |++.+++|+.|++++++++      ++.|.....+       +++..++.......| 
T Consensus       108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~IV~isS~~~~~~~~-  173 (273)
T 3uf0_A          108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSF------GTAMLAHGSG-------RIVTIASMLSFQGGR-  173 (273)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTSCCS-
T ss_pred             cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCC-------EEEEEcchHhcCCCC-
Confidence            9999999986431         5678999999999999998      4443322111       345444443332222 


Q ss_pred             cccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc-----e----eccc-cCCCcccHHHHHHHHHHHh
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV-----E----LSKK-LSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~-----~----i~~~-~~~p~g~v~D~~~gi~l~~  362 (437)
                       ....|+.+|.+.+.+......+.   +.   .+.++.+.++....     .    .... .....+..+|++++++..+
T Consensus       174 -~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~  252 (273)
T 3uf0_A          174 -NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLA  252 (273)
T ss_dssp             -SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHH
T ss_pred             -CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence             35568888877766654444442   22   23333333322100     0    0000 0111235788888888766


Q ss_pred             c-----cCCcEEEEEc
Q 013761          363 G-----GNGRSYVLIL  373 (437)
Q Consensus       363 ~-----~~Ge~y~l~l  373 (437)
                      .     -.|+.+.+.+
T Consensus       253 s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          253 SDAASYVHGQVLAVDG  268 (273)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CchhcCCcCCEEEECc
Confidence            3     2578777743

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.76  E-value=1.2e-17  Score=159.36  Aligned_cols=101  Identities=19%  Similarity=0.305  Sum_probs=85.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC-cH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA-DQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~-~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+. +.  +.+...+.++.++.+|++|+++++++++       .+|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            6789999999999999999999999999999999987 42  1233345678999999999999998875       569


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      +||||||+...         .+++.+++|+.|++++++++
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  124 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAF  124 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            99999997532         15678999999999999997

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.76  E-value=2.9e-18  Score=165.85  Aligned_cols=215  Identities=16%  Similarity=0.135  Sum_probs=126.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC------CCCeEEEEecCCCHHHHHHHHh-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML------PRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~------~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+      ..++.++.+|++|+++++++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999998652  111111      2468899999999999999887     


Q ss_pred             --cccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          226 --NCNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                        ++|+||||||+...             .+++.+++|+.|++++++++.+      .|....        .+++..++.
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~--------g~iv~isS~  149 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVP------HLSSTK--------GEIVNISSI  149 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHT--------CEEEEECCT
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHH------HHhhcC--------CeEEEEecc
Confidence              67999999997431             1556899999999999999844      322110        133443433


Q ss_pred             cc-eeeccCcccchhhhhhhhcccchhhhhcc---ccc---ceeeeeeeccCccc------ee------c----ccc-CC
Q 013761          291 NG-WEVRQGTYFQDVVAFKYDAGMDAKFELSE---TGD---AVFSGYVFTRGGYV------EL------S----KKL-SL  346 (437)
Q Consensus       291 ~~-~i~rP~~~~~~y~~sk~a~~~~~~~~~~~---~~~---~v~~g~~~~~~G~~------~i------~----~~~-~~  346 (437)
                      .. ....|  ....|+.+|.+.+.+......+   .+.   .+.++.+.++....      ..      .    ... ..
T Consensus       150 ~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  227 (278)
T 1spx_A          150 ASGLHATP--DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG  227 (278)
T ss_dssp             TSSSSCCT--TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS
T ss_pred             cccccCCC--CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCc
Confidence            22 21112  2345666666655544332222   222   23333333332100      00      0    000 01


Q ss_pred             CcccHHHHHHHHHHHhc------cCCcEEEEEccCCCCCCCCcHHHHHHHHHhh
Q 013761          347 PLGCTLDRYEGLVLSVG------GNGRSYVLILEAGPSADRSQSKLYFARFSTK  394 (437)
Q Consensus       347 p~g~v~D~~~gi~l~~~------~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~  394 (437)
                      ..+..+|++++++..+.      -.|+.+.+.++.     ..++.++++.+.+.
T Consensus       228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~-----~~~~~~~~~~~~~~  276 (278)
T 1spx_A          228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS-----SLIMGLHCQDFAKL  276 (278)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG-----GGC-----------
T ss_pred             CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCc-----ccccCcccccHHHH
Confidence            12468899998887662      358877774332     35678888877654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.76  E-value=1.3e-17  Score=160.34  Aligned_cols=203  Identities=18%  Similarity=0.162  Sum_probs=132.2

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++++...   +   .+......+.++.+|++|.++++++++     
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999554432   1   122335678999999999999999887     


Q ss_pred             --cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 --NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                        .+|+||||||....          .|++.+++|+.|++++++++      ++.|..  .+       +++..++....
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~--~g-------~iv~isS~~~~  148 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTA------LPKMAK--GG-------AIVTFSSQAGR  148 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH------GGGEEE--EE-------EEEEECCHHHH
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHH------HHHHhc--CC-------EEEEEcCHHhc
Confidence              46999999996521          15678999999999999999      444432  11       34554544332


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhccccc-----ceeeeeeeccCcc----ceecccc-----CCCcccHHHHHHHHH
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSETGD-----AVFSGYVFTRGGY----VELSKKL-----SLPLGCTLDRYEGLV  359 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~-----~v~~g~~~~~~G~----~~i~~~~-----~~p~g~v~D~~~gi~  359 (437)
                      . .+......|..+|.+...+......+.+.     .+.++.+.++...    ......+     ....+..+|++++++
T Consensus       149 ~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~  227 (259)
T 3edm_A          149 D-GGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVA  227 (259)
T ss_dssp             H-CCSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHHH
T ss_pred             c-CCCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            1 12223566888888877766555444432     2333333332110    0000000     011236889998888


Q ss_pred             HHhc-----cCCcEEEEEccC
Q 013761          360 LSVG-----GNGRSYVLILEA  375 (437)
Q Consensus       360 l~~~-----~~Ge~y~l~l~~  375 (437)
                      ..+.     -.|+.+.+.++.
T Consensus       228 ~L~s~~~~~itG~~i~vdGg~  248 (259)
T 3edm_A          228 FLASDDAAYVTGACYDINGGV  248 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESBCS
T ss_pred             HHcCccccCccCCEEEECCCc
Confidence            7663     258888886553

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.76  E-value=4.6e-18  Score=162.92  Aligned_cols=206  Identities=17%  Similarity=0.130  Sum_probs=130.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh------cccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE------NCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~------~~D~VIh  232 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+. ..+.+...+.++.+|++|.++++++++      .+|+|||
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED-VVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH-HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH-HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            678999999999999999999999999999999996543 445567789999999999999999887      6799999


Q ss_pred             eccCCC-------------CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcch-hhhhhhhhccCCCCcceeeccC
Q 013761          233 CATARS-------------TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSK-SKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       233 ~Ag~~~-------------~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~-sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |||+..             ..+++++++|+.|++++++++.+      .|....... ......+++..++.......| 
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~------~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  158 (257)
T 3tl3_A           86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAE------RIAKTEPVGPNAEERGVIINTASVAAFDGQI-  158 (257)
T ss_dssp             CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHH------HHTTSCCC--CCCCSEEEEEECCCC--CCHH-
T ss_pred             CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHH------HHHHhcccccccCCCcEEEEEcchhhcCCCC-
Confidence            999642             12677999999999999999944      332210000 000001455555554432222 


Q ss_pred             cccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc---e----eccccC--CCcccHHHHHHHHHHHhc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV---E----LSKKLS--LPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~---~----i~~~~~--~p~g~v~D~~~gi~l~~~  363 (437)
                       ....|+.+|.+...+......+.+   .   .+.++.+.++.-..   .    ......  ...+..+|++++++..+.
T Consensus       159 -~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s  237 (257)
T 3tl3_A          159 -GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIE  237 (257)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHH
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhc
Confidence             245688888776665544433332   2   23333333322100   0    001111  123467888888887763


Q ss_pred             ---cCCcEEEEEc
Q 013761          364 ---GNGRSYVLIL  373 (437)
Q Consensus       364 ---~~Ge~y~l~l  373 (437)
                         -.|+.+.+.+
T Consensus       238 ~~~itG~~i~vdG  250 (257)
T 3tl3_A          238 NPMLNGEVIRLDG  250 (257)
T ss_dssp             CTTCCSCEEEEST
T ss_pred             CCCCCCCEEEECC
Confidence               3577777743

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.76  E-value=5.1e-18  Score=163.58  Aligned_cols=201  Identities=18%  Similarity=0.226  Sum_probs=139.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST  239 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~  239 (437)
                      +||||||+|+||++++++|+++  |++|++++|+.+. ..+.  ...+.++.+|++|.+++.++++++|+|||+||... 
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~-   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA--AQGITVRQADYGDEAALTSALQGVEKLLLISSSEV-   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH--HTTCEEEECCTTCHHHHHHHTTTCSEEEECC-----
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh--cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc-
Confidence            4899999999999999999998  9999999998653 1111  23688999999999999999999999999998531 


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec-------CCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          240 ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA-------GKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       240 ~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~-------~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                            ..|+.++.++++++++.+++ +.++++       ..|+.+|...|.++...++.++++||+.+.... ..    
T Consensus        78 ------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~-~~----  146 (286)
T 2zcu_A           78 ------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENY-LA----  146 (286)
T ss_dssp             ----------CHHHHHHHHHHHHTCCEEEEEEETTTTTCCSTTHHHHHHHHHHHHHHCSEEEEEEECCBHHHH-HT----
T ss_pred             ------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCcchhHHHHHHHHHHHHHcCCCeEEEeChHHhhhh-HH----
Confidence                  25889999999999999975 555543       246778888888887778999999997443321 10    


Q ss_pred             ccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCCCCCcHHHHH
Q 013761          312 GMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSADRSQSKLYF  388 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~~~~s~~e~~  388 (437)
                       .  .....+.+ . .   .. +.|  ...    ....+++|++++++.++..   .|+.|++.  .+   +.+++.|++
T Consensus       147 -~--~~~~~~~~-~-~---~~-~~~--~~~----~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~--~~---~~~s~~e~~  206 (286)
T 2zcu_A          147 -S--APAALEHG-V-F---IG-AAG--DGK----IASATRADYAAAAARVISEAGHEGKVYELA--GD---SAWTLTQLA  206 (286)
T ss_dssp             -T--HHHHHHHT-E-E---EE-SCT--TCC----BCCBCHHHHHHHHHHHHHSSSCTTCEEEEC--CS---SCBCHHHHH
T ss_pred             -H--hHHhhcCC-c-e---ec-cCC--CCc----cccccHHHHHHHHHHHhcCCCCCCceEEEe--CC---CcCCHHHHH
Confidence             0  00000011 0 0   01 111  111    1223699999999988843   47788773  22   246899999


Q ss_pred             HHHHhhhCC
Q 013761          389 ARFSTKVGF  397 (437)
Q Consensus       389 ~~i~~~~G~  397 (437)
                      +.+.+.+|.
T Consensus       207 ~~i~~~~g~  215 (286)
T 2zcu_A          207 AELTKQSGK  215 (286)
T ss_dssp             HHHHHHHSS
T ss_pred             HHHHHHHCC
Confidence            999999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.76  E-value=4.9e-18  Score=163.34  Aligned_cols=150  Identities=19%  Similarity=0.164  Sum_probs=109.9

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ..+.+|+||||||+||||++++++|+++|++|++++|+.+.  +   .+......+.++.+|++|.++++++++.     
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            34788999999999999999999999999999999998652  1   1223356789999999999999988875     


Q ss_pred             --ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 --CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 --~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                        +|+||||||+...          .+++.+++|+.|++++++++      ++.|.....+       +++..++.....
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~  171 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAF------APAMIAAKRG-------HIINISSLAGKN  171 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCC-------EEEEECSSCSSC
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhCCCc-------eEEEEechhhcC
Confidence              6999999997321          15678999999999999998      4444322211       355555544332


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ..|  ....|+.+|.+.+.+......+
T Consensus       172 ~~~--~~~~Y~asKaa~~~l~~~la~e  196 (262)
T 3rkr_A          172 PVA--DGAAYTASKWGLNGLMTSAAEE  196 (262)
T ss_dssp             CCT--TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--CCchHHHHHHHHHHHHHHHHHH
Confidence            222  3567888888777665444433

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.76  E-value=1.2e-17  Score=167.96  Aligned_cols=222  Identities=19%  Similarity=0.146  Sum_probs=150.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC--CCCeEEEEec-CCCHHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML--PRSVEIVLGD-VGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~v~~v~~D-ltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+|+||||||||+||++|+++|+++|++|++++|+.+......+  ..++.++.+| ++|.+++.++++++|+||||++.
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            36789999999999999999999999999999998763211111  2368899999 99999999999999999999975


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcC-Cc-eeeeecC-----------CcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          237 RSTITGDLFRVDYQGVYNVTKAFQDFN-NK-LAQLRAG-----------KSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       237 ~~~~~~~~~~vNv~gt~~l~~aa~~~g-vk-l~~l~~~-----------~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      ...      ..|..+ .++++++++.+ ++ +.++++.           .|+.+|...+.++...++.++++||+.+ .+
T Consensus        84 ~~~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg~~-g~  155 (352)
T 1xgk_A           84 QAG------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIY-NN  155 (352)
T ss_dssp             TTS------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEE-GG
T ss_pred             CCc------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCEEEEeccee-cC
Confidence            321      347777 99999999998 74 5555432           3567888888888888899999998743 22


Q ss_pred             hhhhhhhcccchhhhhc--ccccceeeeeeeccCccceeccccCCCcccH-HHHHHHHHHHhcc-----CCcEEEEEccC
Q 013761          304 VVAFKYDAGMDAKFELS--ETGDAVFSGYVFTRGGYVELSKKLSLPLGCT-LDRYEGLVLSVGG-----NGRSYVLILEA  375 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~--~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v-~D~~~gi~l~~~~-----~Ge~y~l~l~~  375 (437)
                      ....    .....+...  ..+..  ...+  +++ ...    ..+..++ +|++++++.++..     .|+.|++.  .
T Consensus       156 ~~~~----~~~~~~~~~~~~~g~~--~~~~--~~~-~~~----~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~--~  220 (352)
T 1xgk_A          156 NFTS----LPYPLFQMELMPDGTF--EWHA--PFD-PDI----PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT--F  220 (352)
T ss_dssp             GCBS----SSCSSCBEEECTTSCE--EEEE--SSC-TTS----CEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC--S
T ss_pred             Cchh----cccccccccccCCCce--EEee--ccC-CCC----ceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe--c
Confidence            1110    000000000  00100  0000  110 000    0112368 8999999988843     47888774  2


Q ss_pred             CCCCCCCcHHHHHHHHHhhhCCc--eecccCCCcc
Q 013761          376 GPSADRSQSKLYFARFSTKVGFC--RVRVPFSSFR  408 (437)
Q Consensus       376 ~~~~~~~s~~e~~~~i~~~~G~~--~v~iP~~~~r  408 (437)
                      +    .+++.|+++.+.+.+|.+  ...+|.+.++
T Consensus       221 ~----~~s~~e~~~~i~~~~G~~~~~~~vp~~~~~  251 (352)
T 1xgk_A          221 E----TLSPVQVCAAFSRALNRRVTYVQVPKVEIK  251 (352)
T ss_dssp             E----EECHHHHHHHHHHHHTSCEEEEECSSCCCC
T ss_pred             C----CCCHHHHHHHHHHHHCCCCceEECCHHHHH
Confidence            2    478999999999999953  2346655444

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.76  E-value=1e-17  Score=162.86  Aligned_cols=104  Identities=25%  Similarity=0.292  Sum_probs=84.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++       
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999998652  11   22335678999999999999998887       


Q ss_pred             cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          226 NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      .+|+||||||+....         +++++++|+.|++++++++.+
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  145 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLR  145 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhc
Confidence            359999999985421         567899999999999999844

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.76  E-value=3.1e-18  Score=167.29  Aligned_cols=220  Identities=18%  Similarity=0.145  Sum_probs=134.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC----CCCeEEEEecCCCHHHHHHHHhcc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML----PRSVEIVLGDVGDPCTLKAAVENC----  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~----~~~v~~v~~Dltd~~~v~~a~~~~----  227 (437)
                      +|.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+.+    +..+.++.+|++|.++++++++.+    
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  102 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999999999999999998652  112221    457899999999999999988764    


Q ss_pred             ---cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          228 ---NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       228 ---D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                         |+||||||....         .++..+++|+.|++++++++.+...+     ....       .+++..++..... 
T Consensus       103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~~~~-------~~iv~isS~~~~~-  169 (302)
T 1w6u_A          103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK-----AQKG-------AAFLSITTIYAET-  169 (302)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTCC-------EEEEEECCTHHHH-
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----hcCC-------CEEEEEccccccc-
Confidence               999999997432         15678999999999999988542210     0000       0233333322211 


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcc---cccc---eeeeeeeccCcccee----------cccc-CCCcccHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSE---TGDA---VFSGYVFTRGGYVEL----------SKKL-SLPLGCTLDRYEGL  358 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~---~~~~---v~~g~~~~~~G~~~i----------~~~~-~~p~g~v~D~~~gi  358 (437)
                       +......|+.+|.+.+.+......+   .+..   +.++.+.++.-....          .... ....++++|+++++
T Consensus       170 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~  248 (302)
T 1w6u_A          170 -GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLA  248 (302)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHH
Confidence             1123455777776666555433333   2222   223333222000000          0000 01124689999999


Q ss_pred             HHHhcc-----CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC
Q 013761          359 VLSVGG-----NGRSYVLILEAGPSADRSQSKLYFARFSTKVG  396 (437)
Q Consensus       359 ~l~~~~-----~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G  396 (437)
                      +..+..     .|+.|.+..  +.   ..+++++++.+.+..|
T Consensus       249 ~~l~~~~~~~~~G~~~~v~g--g~---~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          249 AFLCSDYASWINGAVIKFDG--GE---EVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHTSGGGTTCCSCEEEEST--TH---HHHHHSTTGGGGGCCH
T ss_pred             HHHcCCcccccCCCEEEECC--Ce---eeccCCccccchhhcc
Confidence            887732     477776632  21   2355666666665544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.76  E-value=5e-18  Score=159.85  Aligned_cols=192  Identities=15%  Similarity=0.089  Sum_probs=124.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcc----cEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENC----NKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~----D~VIh~A  234 (437)
                      ||+||||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++.+    |+|||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            4689999999999999999999999999999998763  334455678899999999999999999876    8999999


Q ss_pred             cCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhh
Q 013761          235 TARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       235 g~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      |.....         +++.+++|+.|++++++++.+      .|.....        +++..++.....  +......|+
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~~--------~iv~isS~~~~~--~~~~~~~Y~  144 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVK------RYKDQPV--------NVVMIMSTAAQQ--PKAQESTYC  144 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHH------HHTTSCC--------EEEEECCGGGTS--CCTTCHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHH------HHHhCCC--------eEEEEeecccCC--CCCCCchhH
Confidence            975321         567899999999999999944      3322110        233333333222  222356788


Q ss_pred             hhhhhcccchhhhhccccc------ceeeeeeeccCccceecccc-CCCcccHHHHHHHHHHHhccCCcEE
Q 013761          306 AFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYVELSKKL-SLPLGCTLDRYEGLVLSVGGNGRSY  369 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~~i~~~~-~~p~g~v~D~~~gi~l~~~~~Ge~y  369 (437)
                      .+|.+...+......+++.      .+.++.+.++.... ..... .......+|+++.++..+..+...|
T Consensus       145 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          145 AVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET-SGKSLDTSSFMSAEDAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh-cCCCCCcccCCCHHHHHHHHHHHHhCcCCCC
Confidence            8888777766555444432      12222222221000 00001 0112357888888888776444444

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.76  E-value=7.3e-18  Score=160.16  Aligned_cols=102  Identities=15%  Similarity=0.188  Sum_probs=86.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +.+|+||||||+||||++++++|+++|++|++++|+.+.  ..   +......+.++.+|++|+++++++++       +
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999998652  11   22235578899999999999999887       6


Q ss_pred             ccEEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHH
Q 013761          227 CNKIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ~D~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|+||||||....        .+++.+++|+.|++++++++.
T Consensus        89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  130 (255)
T 1fmc_A           89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVA  130 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            7999999997542        146789999999999999884

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.76  E-value=5.5e-18  Score=165.01  Aligned_cols=205  Identities=16%  Similarity=0.083  Sum_probs=126.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+..+   +   .+......+.++++|++|+++++++++      
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999975432   1   122335679999999999999998887      


Q ss_pred             -cccEEEEeccCCC--C---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 -NCNKIIYCATARS--T---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 -~~D~VIh~Ag~~~--~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                       .+|+||||||+..  .         .|++++++|+.|++++++++      ++.|......    ...+++..++....
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~~----~~g~Iv~isS~~~~  175 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAV------LKAMLASDAR----ASRSIINITSVSAV  175 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHH------HHHHHHHCCC----CCEEEEEECCC---
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHhCCC----CCCEEEEEcchhhc
Confidence             5699999999831  1         25678999999999999999      4444321100    00135555555443


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc--e-ecccc---CCC---cccHHHHHHHH
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV--E-LSKKL---SLP---LGCTLDRYEGL  358 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~--~-i~~~~---~~p---~g~v~D~~~gi  358 (437)
                      ...|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++....  . ....+   ..|   .+..+|+++++
T Consensus       176 ~~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  253 (280)
T 4da9_A          176 MTSP--ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIV  253 (280)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHH
T ss_pred             cCCC--CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHH
Confidence            3333  24568888877766654444332   22   23333333322100  0 00000   111   23678999988


Q ss_pred             HHHhc-----cCCcEEEEEcc
Q 013761          359 VLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       359 ~l~~~-----~~Ge~y~l~l~  374 (437)
                      +..+.     -.|+.+.+.++
T Consensus       254 ~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          254 AGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             HHHHTSTTGGGTTCEEEESTT
T ss_pred             HHHhCccccCCCCCEEEECCC
Confidence            87763     34787777433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.76  E-value=1.3e-17  Score=166.15  Aligned_cols=101  Identities=19%  Similarity=0.224  Sum_probs=83.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---HH----H---HhhCCCCeEEEEecCCCHHHHHHHHh---
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---QE----V---VDMLPRSVEIVLGDVGDPCTLKAAVE---  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~~----~---~~~~~~~v~~v~~Dltd~~~v~~a~~---  225 (437)
                      |.+|++|||||+||||++++++|+++|++|++.+|+..   .+    .   ....+..+.++.+|++|.++++++++   
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999998742   11    1   11224578999999999999999988   


Q ss_pred             ----cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          226 ----NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       226 ----~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                          .+|+||||||+...         .+++++++|+.|++++++++
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~  129 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAA  129 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence                67999999997532         15678999999999999999

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.76  E-value=6.1e-18  Score=163.56  Aligned_cols=200  Identities=15%  Similarity=0.087  Sum_probs=137.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+. +   .......++.++.+|++|+++++++++.       
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999999998763 1   1223356789999999999999888865       


Q ss_pred             ccEEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          227 CNKIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       227 ~D~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +|+||||||+...        .|++.+++|+.|++++++++      ++.|.... |       .+++.+|+......|+
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~p~m~~~~-G-------~IVnisS~~~~~~~~~  149 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYC------VPHLKATR-G-------AIVNISSKTAVTGQGN  149 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHT-C-------EEEEECCTHHHHCCSS
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcC-C-------eEEEEeehhhccCCCC
Confidence            4999999997532        26779999999999999999      66664321 2       5777777766544444


Q ss_pred             cccchhhhhhhhcccchhhhhcccc------cceeeeeeeccCcc--c------e-----eccccCC--CcccHHHHHHH
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSETG------DAVFSGYVFTRGGY--V------E-----LSKKLSL--PLGCTLDRYEG  357 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~~------~~v~~g~~~~~~G~--~------~-----i~~~~~~--p~g~v~D~~~g  357 (437)
                        ...|..+|.+...+......+.+      +.+.++.+.++.-.  .      .     +....++  ..+..+|+++.
T Consensus       150 --~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~  227 (258)
T 4gkb_A          150 --TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADT  227 (258)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHH
T ss_pred             --chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence              56788888776665544443333      24555555543210  0      0     0011111  12356777777


Q ss_pred             HHHHhc-----cCCcEEEEEc
Q 013761          358 LVLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       358 i~l~~~-----~~Ge~y~l~l  373 (437)
                      ++..+.     -.|+...+.+
T Consensus       228 v~fLaS~~a~~iTG~~i~VDG  248 (258)
T 4gkb_A          228 AVFLLSPRASHTTGEWLFVDG  248 (258)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCchhcCccCCeEEECC
Confidence            665552     3577776643

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.76  E-value=8.1e-18  Score=159.93  Aligned_cols=102  Identities=22%  Similarity=0.282  Sum_probs=84.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCe-EEEEecCCCHHHHHHHHh------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSV-EIVLGDVGDPCTLKAAVE------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v-~~v~~Dltd~~~v~~a~~------~~D~  229 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.++..+ .++.+|++|.++++++++      .+|+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            678999999999999999999999999999999998652  2222334456 889999999999998875      5799


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHH
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||||||.....         +++.+++|+.|++++++++.
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  128 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFG  128 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99999975421         46689999999999999874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.76  E-value=7.6e-18  Score=161.39  Aligned_cols=101  Identities=15%  Similarity=0.151  Sum_probs=85.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++...+.++.+|++|+++++++++       .+|+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            678999999999999999999999999999999998652  2233444568899999999999998887       6799


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      ||||||+...         .+++.+++|+.|++++++++
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  121 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTV  121 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            9999997542         15678999999999888877

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.76  E-value=9.2e-18  Score=153.56  Aligned_cols=136  Identities=19%  Similarity=0.277  Sum_probs=104.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      +|+|+||||+|+||++++++|+++|++|++++|+.+.. ......++.++.+|++|.+++.++++++|+|||+||.....
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   81 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc-ccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence            47999999999999999999999999999999986531 11114578999999999999999999999999999975431


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--------------CcchhhhhhhhhccCCCCcceeeccCc
Q 013761          241 TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--------------KSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       241 ~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--------------~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                        ...++|+.++.++++++++.+++ +.++++.              .|+.+|...+.++...++.++++||+.
T Consensus        82 --~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~  153 (206)
T 1hdo_A           82 --SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPH  153 (206)
T ss_dssp             --SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSE
T ss_pred             --CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhCCCCEEEEeCCc
Confidence              22358999999999999998875 5544431              123444455555556667777777764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.76  E-value=1.7e-18  Score=177.70  Aligned_cols=227  Identities=14%  Similarity=0.074  Sum_probs=143.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-H----------------HhhCCCCeEEEEecCCCHHHHH
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-V----------------VDMLPRSVEIVLGDVGDPCTLK  221 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~----------------~~~~~~~v~~v~~Dltd~~~v~  221 (437)
                      +.+|+||||||+||||++|+++|++.|++|++++|+.+.. .                ......++.++.+|++|.+++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            5678999999999999999999999999999999987621 0                0111357999999999988888


Q ss_pred             HHHhcccEEEEeccCCC--CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhh--hhhhhccCCCCcceeecc
Q 013761          222 AAVENCNKIIYCATARS--TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKL--LLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       222 ~a~~~~D~VIh~Ag~~~--~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~--~~~k~v~~ssl~~~i~rP  297 (437)
                       ++.++|+||||||...  ..+...+++|+.|+.++++++.+...++.++++...|....  .....+.+....    .+
T Consensus       147 -~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~----~~  221 (427)
T 4f6c_A          147 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVY----KG  221 (427)
T ss_dssp             -CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGGGSEECSSCSCCEECTTCSC----SS
T ss_pred             -CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHhCCCccCCCCCccccccccc----cC
Confidence             7778999999999864  34677999999999999999998434566665322110000  000112222110    11


Q ss_pred             CcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce---------------ecc----ccCC---------Ccc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE---------------LSK----KLSL---------PLG  349 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~---------------i~~----~~~~---------p~g  349 (437)
                      ..+...|+.+|+.++....... +.+..+...++...+|...               ..+    ...+         ...
T Consensus       222 ~~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  300 (427)
T 4f6c_A          222 QLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFS  300 (427)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCE
T ss_pred             CCCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEe
Confidence            2245678888887776665432 3454444444433333110               000    0001         123


Q ss_pred             cHHHHHHHHHHHhcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          350 CTLDRYEGLVLSVGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       350 ~v~D~~~gi~l~~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                      +++|++++++.++..  .|+.|++  .++.   .+++.|+++.+.+ .|.
T Consensus       301 ~v~DvA~ai~~~~~~~~~g~~~~l--~~~~---~~s~~el~~~i~~-~g~  344 (427)
T 4f6c_A          301 FVDTTARQIVALAQVNTPQIIYHV--LSPN---KMPVKSLLECVKR-KEI  344 (427)
T ss_dssp             EHHHHHHHHHHHTTSCCCCSEEEE--SCSC---CEEHHHHHHHHHS-SCC
T ss_pred             eHHHHHHHHHHHHcCCCCCCEEEe--cCCC---CCcHHHHHHHHHH-cCC
Confidence            799999999998843  5777876  3332   4789999999998 453

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.76  E-value=1e-17  Score=160.37  Aligned_cols=200  Identities=17%  Similarity=0.161  Sum_probs=133.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecC--CCHHHHHHHHh----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDV--GDPCTLKAAVE----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dl--td~~~v~~a~~----  225 (437)
                      .|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.    ....+.++.+|+  +|.++++++++    
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998652  11111    133788999999  99999988887    


Q ss_pred             ---cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          226 ---NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                         .+|+||||||+...          .|++++++|+.|++++++++      ++.|.....+       +++..++...
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~m~~~~~g-------~iv~isS~~~  155 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQAL------LPLLLKSDAG-------SLVFTSSSVG  155 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHTSSSC-------EEEEECCGGG
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH------HHHHHHCCCC-------EEEEECChhh
Confidence               46999999997421          15678999999999999999      5555433222       3555555443


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce-ec-----cccCCCcccHHHHHHHHHHHhc---
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-LS-----KKLSLPLGCTLDRYEGLVLSVG---  363 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-i~-----~~~~~p~g~v~D~~~gi~l~~~---  363 (437)
                      ....|  ....|..+|.+...+......+++.. +......|+.+.. ..     .......+..+|+++.++..+.   
T Consensus       156 ~~~~~--~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L~s~~~  232 (252)
T 3f1l_A          156 RQGRA--NWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDS  232 (252)
T ss_dssp             TSCCT--TCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred             ccCCC--CCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccchhccCCHHHHHHHHHHHcCccc
Confidence            32223  35678888888777766555555433 3333334433211 00     0000112246788887776652   


Q ss_pred             --cCCcEEEEEc
Q 013761          364 --GNGRSYVLIL  373 (437)
Q Consensus       364 --~~Ge~y~l~l  373 (437)
                        -.|+.+.+.+
T Consensus       233 ~~itG~~i~vdg  244 (252)
T 3f1l_A          233 RRKTGMTFDAQP  244 (252)
T ss_dssp             TTCCSCEEESSC
T ss_pred             cCCCCCEEEeCC
Confidence              3477666643

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.76  E-value=8.2e-18  Score=164.39  Aligned_cols=223  Identities=12%  Similarity=0.039  Sum_probs=145.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---HHH---Hhh-CCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---QEV---VDM-LPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~~~---~~~-~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      +|+|+||||||+||++++++|+++|++|++++|+..   .+.   +.. ...+++++.+|++|++++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            568999999999999999999999999999999853   111   111 1457899999999999999999999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHHHHHHhcC-CceeeeecCC---------------cchhhhhhhhhccCCCCcceeecc
Q 013761          234 ATARSTITGDLFRVDYQGVYNVTKAFQDFN-NKLAQLRAGK---------------SSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       234 Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~g-vkl~~l~~~~---------------~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      |+.....      .|+.++.++++++++++ ++....+.-.               ...+|..++.++...+++++++||
T Consensus        84 a~~~~~~------~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilrp  157 (313)
T 1qyd_A           84 LAGGVLS------HHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS  157 (313)
T ss_dssp             CCCSSSS------TTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEEC
T ss_pred             Cccccch------hhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCeEEEEe
Confidence            9975432      26778899999999998 8632222100               014566667777777889999999


Q ss_pred             CcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEcc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILE  374 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~  374 (437)
                      +.++..... .+     ....    ............+|.....    .+..+++|++++++.++..   .|+.|.+. +
T Consensus       158 ~~~~~~~~~-~~-----~~~~----~~~~~~~~~~~~~~~g~~~----~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~-g  222 (313)
T 1qyd_A          158 NMFAGYFAG-SL-----AQLD----GHMMPPRDKVLIYGDGNVK----GIWVDEDDVGTYTIKSIDDPQTLNKTMYIR-P  222 (313)
T ss_dssp             CEEHHHHTT-TS-----SCTT----CCSSCCSSEECCBTTSCSE----EEEECHHHHHHHHHHHTTCGGGSSSEEECC-C
T ss_pred             ceecccccc-cc-----cccc----ccccCCCCeEEEeCCCCce----EEEEEHHHHHHHHHHHHhCcccCCceEEEe-C
Confidence            855432211 00     0000    0000000001111111111    1123699999999998843   35655442 2


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhCCc--eecccCCCc
Q 013761          375 AGPSADRSQSKLYFARFSTKVGFC--RVRVPFSSF  407 (437)
Q Consensus       375 ~~~~~~~~s~~e~~~~i~~~~G~~--~v~iP~~~~  407 (437)
                      .+   +.+|+.|+++.+.+.+|.+  ...+|...+
T Consensus       223 ~~---~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  254 (313)
T 1qyd_A          223 PM---NILSQKEVIQIWERLSEQNLDKIYISSQDF  254 (313)
T ss_dssp             GG---GEEEHHHHHHHHHHHHTCCCEECCBCSHHH
T ss_pred             CC---CccCHHHHHHHHHHhcCCCCceEECCHHHH
Confidence            21   2478999999999999942  233554433

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.76  E-value=7.7e-18  Score=162.59  Aligned_cols=202  Identities=15%  Similarity=0.089  Sum_probs=130.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..++    ....+.++.+|++|+++++++++      
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999999999999999998652  11111    35679999999999999998887      


Q ss_pred             -cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|+||||||+....         |++.+++|+.|++++++++.+      .|.....+      .+++..++......
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~~~------g~iv~isS~~~~~~  164 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGK------AMVAAGEG------GAIITVASAAALAP  164 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHTSC------EEEEEECCGGGTSC
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH------HHHhcCCC------eEEEEEcchhhccC
Confidence             569999999986421         567899999999999999843      33221100      13444444433222


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc-----e----ecccc-CCCcccHHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV-----E----LSKKL-SLPLGCTLDRYEGLV  359 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~-----~----i~~~~-~~p~g~v~D~~~gi~  359 (437)
                      .|  ....|..+|.+...+......+++   .   .+.++.+.++....     .    ..... ....+..+|++++++
T Consensus       165 ~~--~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~  242 (266)
T 4egf_A          165 LP--DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVV  242 (266)
T ss_dssp             CT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             CC--CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            22  345677888776666544444332   2   23333333321100     0    00011 111236789999888


Q ss_pred             HHhc-----cCCcEEEEEc
Q 013761          360 LSVG-----GNGRSYVLIL  373 (437)
Q Consensus       360 l~~~-----~~Ge~y~l~l  373 (437)
                      ..+.     -.|+.+.+.+
T Consensus       243 ~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCccCcEEEECC
Confidence            7663     2478777743

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.75  E-value=9.5e-18  Score=160.16  Aligned_cols=204  Identities=19%  Similarity=0.134  Sum_probs=132.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcHHHH----hhC-CCCeEEEEecCCCH-HHHHHHHh------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQEVV----DML-PRSVEIVLGDVGDP-CTLKAAVE------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~~~~----~~~-~~~v~~v~~Dltd~-~~v~~a~~------  225 (437)
                      |.+|+++||||+||||++++++|+++|++ |++++|+.+.+..    +.. ...+.++.+|++|+ ++++++++      
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            67899999999999999999999999996 9999998642211    122 34688999999998 88888876      


Q ss_pred             -cccEEEEeccCCC-CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          226 -NCNKIIYCATARS-TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       226 -~~D~VIh~Ag~~~-~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                       .+|+||||||+.. ..+++.+++|+.|++++++++.+      .|.....+    ...+++..++.......|  ....
T Consensus        83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~~~----~~g~iv~isS~~~~~~~~--~~~~  150 (254)
T 1sby_A           83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILD------FWDKRKGG----PGGIIANICSVTGFNAIH--QVPV  150 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHH------HHCGGGTC----CCEEEEEECCGGGTSCCT--TSHH
T ss_pred             CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHH------HHHHhcCC----CCCEEEEECchhhccCCC--CchH
Confidence             5799999999754 34788999999999999999944      33211100    001344444443322222  3456


Q ss_pred             hhhhhhhcccchhhhhcc---ccc---ceeeeeeeccCccc--ee---cc---c--cCCCcccHHHHHHHHHHHh--ccC
Q 013761          304 VVAFKYDAGMDAKFELSE---TGD---AVFSGYVFTRGGYV--EL---SK---K--LSLPLGCTLDRYEGLVLSV--GGN  365 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~---~~~---~v~~g~~~~~~G~~--~i---~~---~--~~~p~g~v~D~~~gi~l~~--~~~  365 (437)
                      |+.+|.+.+.+......+   .+.   .+.++.+.++....  ..   ..   .  ...|....+|++++++..+  ...
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~~~~~  230 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKN  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHCCT
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHHcCCC
Confidence            888887776655433333   222   23444444432100  00   00   0  0124457889999988776  356


Q ss_pred             CcEEEEEcc
Q 013761          366 GRSYVLILE  374 (437)
Q Consensus       366 Ge~y~l~l~  374 (437)
                      |+.|.+.++
T Consensus       231 G~~~~v~gG  239 (254)
T 1sby_A          231 GAIWKLDLG  239 (254)
T ss_dssp             TCEEEEETT
T ss_pred             CCEEEEeCC
Confidence            888877544

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.75  E-value=9.1e-18  Score=161.85  Aligned_cols=149  Identities=17%  Similarity=0.174  Sum_probs=105.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCC-CeEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPR-SVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~-~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.    .+. .+.++.+|++|.++++++++.    
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999998652  11111    223 489999999999999988864    


Q ss_pred             ---ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 ---CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                         +|+||||||+....         |++.+++|+.|++++++++.      +.|.....+       +++..++.....
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~------~~~~~~~~g-------~iv~isS~~~~~  151 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFL------PQLESRADA-------AIVCVNSLLASQ  151 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHH------HHHTTSTTE-------EEEEEEEGGGTS
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHH------HHhhccCCe-------EEEEECCcccCC
Confidence               59999999975321         56789999999999999994      333322211       244433333222


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ..|  ....|..+|.+...+......+
T Consensus       152 ~~~--~~~~Y~asKaa~~~l~~~la~e  176 (265)
T 3lf2_A          152 PEP--HMVATSAARAGVKNLVRSMAFE  176 (265)
T ss_dssp             CCT--TBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--CchhhHHHHHHHHHHHHHHHHH
Confidence            222  2456777776666555433333

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.75  E-value=1.7e-17  Score=162.42  Aligned_cols=199  Identities=18%  Similarity=0.155  Sum_probs=130.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H----HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E----VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~----~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +    ........+.++.+|++|+++++++++      
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998752  1    122335678999999999999998887      


Q ss_pred             -cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          226 -NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                       .+|+||||||....          .+++.+++|+.|++++++++.+.      |...  +       +++..++.....
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~--g-------~iv~isS~~~~~  188 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH------LKQG--D-------VIINTASIVAYE  188 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT------CCTT--C-------EEEEECCTHHHH
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhhC--C-------EEEEEechHhcC
Confidence             46999999997532          15679999999999999999543      3211  1       344444443322


Q ss_pred             eccCcccchhhhhhhhcccchhhhhccc---ccc---eeeeeeeccCccce--------ecccc-CCCcccHHHHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSET---GDA---VFSGYVFTRGGYVE--------LSKKL-SLPLGCTLDRYEGLV  359 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~~---v~~g~~~~~~G~~~--------i~~~~-~~p~g~v~D~~~gi~  359 (437)
                      ..|  ....|+.+|.+.+.+......+.   +..   +.++.+.++.-...        ..... ....+..+|++++++
T Consensus       189 ~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  266 (291)
T 3ijr_A          189 GNE--TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYV  266 (291)
T ss_dssp             CCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHH
T ss_pred             CCC--CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHH
Confidence            222  24567777777666554443333   222   23333333211000        00000 111236788888888


Q ss_pred             HHhc-----cCCcEEEEEc
Q 013761          360 LSVG-----GNGRSYVLIL  373 (437)
Q Consensus       360 l~~~-----~~Ge~y~l~l  373 (437)
                      ..+.     -.|+.+.+.+
T Consensus       267 ~L~s~~~~~itG~~i~vdG  285 (291)
T 3ijr_A          267 YLASSDSSYVTGQMIHVNG  285 (291)
T ss_dssp             HHHSGGGTTCCSCEEEESS
T ss_pred             HHhCCccCCCcCCEEEECC
Confidence            7662     3577777743

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.75  E-value=4.5e-18  Score=162.16  Aligned_cols=102  Identities=22%  Similarity=0.211  Sum_probs=85.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|+++++++++       .
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  11   22335678999999999999999887       5


Q ss_pred             ccEEEEeccCCCC------------chhhHHHHHHHHHHHHHHHHH
Q 013761          227 CNKIIYCATARST------------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ~D~VIh~Ag~~~~------------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|+||||||+...            .+++.+++|+.|++++++++.
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  132 (253)
T 3qiv_A           87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVY  132 (253)
T ss_dssp             CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            6999999997321            156789999999999999883

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.75  E-value=8.6e-18  Score=163.19  Aligned_cols=201  Identities=15%  Similarity=0.125  Sum_probs=129.0

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      ..|.+|++|||||+||||++++++|+++|++|++++|+.+.  +...+    .+..+.++.+|++|.++++++++     
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999998652  11111    25678999999999999998887     


Q ss_pred             --cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          226 --NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                        .+|+||||||+...         .|++++++|+.|++++++++..      .|.....       .+++..++.....
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~~-------g~iv~isS~~~~~  169 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYE------KFFRDHG-------GVIVNITATLGNR  169 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HTHHHHC-------EEEEEECCSHHHH
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHHcCC-------CEEEEECchhhCC
Confidence              46999999996432         1567999999999999999843      2221111       1344444433222


Q ss_pred             eccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc------e----ec-cccCCCcccHHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV------E----LS-KKLSLPLGCTLDRYEG  357 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~------~----i~-~~~~~p~g~v~D~~~g  357 (437)
                      ..|  ....|+.+|.+...+......++   +.   .+.++.+.++....      .    .. .......+..+|++++
T Consensus       170 ~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  247 (277)
T 4fc7_A          170 GQA--LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHS  247 (277)
T ss_dssp             TCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             CCC--CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHH
Confidence            222  24557777766665554333333   21   23333333221000      0    00 0011123467899988


Q ss_pred             HHHHhc-----cCCcEEEEE
Q 013761          358 LVLSVG-----GNGRSYVLI  372 (437)
Q Consensus       358 i~l~~~-----~~Ge~y~l~  372 (437)
                      ++..+.     -.|+.+.+.
T Consensus       248 v~fL~s~~~~~itG~~i~vd  267 (277)
T 4fc7_A          248 VLYLASPLASYVTGAVLVAD  267 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHcCCccCCcCCCEEEEC
Confidence            887763     357877774

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.75  E-value=2e-17  Score=153.88  Aligned_cols=202  Identities=10%  Similarity=-0.040  Sum_probs=126.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT  241 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~  241 (437)
                      |+||||||||+||++|+++|+++|++|++++|+.+. ........+.++.+|++|.++  +++.++|+||||||....  
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK-AADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWG--   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTT--
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccc-cccccCCCceEEecccccccH--hhcccCCEEEECCccCCC--
Confidence            479999999999999999999999999999998653 222344689999999999988  888999999999998622  


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhc
Q 013761          242 GDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       242 ~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                      .....+|+.++.++++++++.+.++.++++. .+............+.       .+..+...|+.+|...+... ....
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~-------~~~~~~~~y~~sK~~~e~~~-~~~~  147 (224)
T 3h2s_A           76 SGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFP-------ESAASQPWYDGALYQYYEYQ-FLQM  147 (224)
T ss_dssp             SSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCC-------GGGGGSTTHHHHHHHHHHHH-HHTT
T ss_pred             cchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCC-------CCCccchhhHHHHHHHHHHH-HHHh
Confidence            1245789999999999999988666666532 1110000000000000       01112345666666555221 1122


Q ss_pred             ccccceeeeeeeccCccce------eccccC-----CCcccHHHHHHHHHHHhc---cCCcEEEEEccCC
Q 013761          321 ETGDAVFSGYVFTRGGYVE------LSKKLS-----LPLGCTLDRYEGLVLSVG---GNGRSYVLILEAG  376 (437)
Q Consensus       321 ~~~~~v~~g~~~~~~G~~~------i~~~~~-----~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l~~~  376 (437)
                      +.+..+...++...+|...      ....+.     ....+++|++++++.++.   ..|+.|++..-+.
T Consensus       148 ~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~  217 (224)
T 3h2s_A          148 NANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADL  217 (224)
T ss_dssp             CTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC-
T ss_pred             cCCCcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcc
Confidence            3344433334333332100      000110     112379999999999984   3488898854433

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.75  E-value=1.6e-17  Score=159.42  Aligned_cols=102  Identities=17%  Similarity=0.214  Sum_probs=85.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHh--------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVE--------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~--------  225 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +..   ...+.++.++.+|++|+++++++++        
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  111   1224578899999999999998884        


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      .+|+||||||+...         .+++++++|+.|++++++++.
T Consensus        87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  130 (260)
T 2ae2_A           87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH  130 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            57999999997532         156789999999999999983

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.75  E-value=1.1e-17  Score=161.56  Aligned_cols=201  Identities=15%  Similarity=0.089  Sum_probs=130.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH------HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE------VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~------~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++.+|+||||||+||||++++++|+++|++|++++|+....      ........+.++.+|++|.++++++++      
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD  105 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            37789999999999999999999999999999999965421      122335678999999999999998887      


Q ss_pred             -cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|+||||||+....         +++.+++|+.|++++++++      ++.|.....+       +++..++..... 
T Consensus       106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~-  171 (271)
T 4iin_A          106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREA------LKVMSKSRFG-------SVVNVASIIGER-  171 (271)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCHHHHH-
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHH------HHHHhhcCCC-------EEEEEechhhcC-
Confidence             569999999985432         5678999999999999998      3333322111       344444433222 


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc---ee----cccc-CCCcccHHHHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV---EL----SKKL-SLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~---~i----~~~~-~~p~g~v~D~~~gi~l~  361 (437)
                       +......|+.+|.+.+.+......+.   +.   .+.++.+.++....   ..    .... ....+..+|++++++..
T Consensus       172 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l  250 (271)
T 4iin_A          172 -GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFL  250 (271)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred             -CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence             22235668888877766654444432   22   23333333321100   00    0001 11223688999988877


Q ss_pred             hc-----cCCcEEEEEc
Q 013761          362 VG-----GNGRSYVLIL  373 (437)
Q Consensus       362 ~~-----~~Ge~y~l~l  373 (437)
                      +.     -.|+.+.+.+
T Consensus       251 ~s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          251 LSDHSSYITGETLKVNG  267 (271)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCCCcCCCcCCEEEeCC
Confidence            63     2578777743

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.75  E-value=2.6e-17  Score=160.53  Aligned_cols=192  Identities=14%  Similarity=0.118  Sum_probs=128.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---------H---HHhhCCCCeEEEEecCCCHHHHHHHHh-
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---------E---VVDMLPRSVEIVLGDVGDPCTLKAAVE-  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---------~---~~~~~~~~v~~v~~Dltd~~~v~~a~~-  225 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.         +   ........+.++.+|++|.++++++++ 
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            678999999999999999999999999999999998651         1   122235578999999999999999887 


Q ss_pred             ------cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          226 ------NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       226 ------~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                            .+|+||||||+....         +++++++|+.|++++++++      ++.|.....+       +++..++.
T Consensus        87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~iv~isS~  153 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSC------IPHMKGRDNP-------HILTLSPP  153 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHH------GGGTTTSSSC-------EEEECCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCc-------EEEEECCh
Confidence                  569999999975421         5678999999999999999      5555433222       45666654


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee--c------cccCCCcccHHHHHHHHHHHh
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL--S------KKLSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i--~------~~~~~p~g~v~D~~~gi~l~~  362 (437)
                      ......+ .....|+.+|.+...+......+.+..-+......|+.....  .      .......+..+|++++++..+
T Consensus       154 ~~~~~~~-~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedvA~~~~~l~  232 (285)
T 3sc4_A          154 IRLEPKW-LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYVVL  232 (285)
T ss_dssp             CCCSGGG-SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHHHHHHHHHH
T ss_pred             hhccCCC-CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccccccccCCCCHHHHHHHHHHHh
Confidence            4332220 124668888887776665444443322122222333321110  0      000111235678888888777


Q ss_pred             cc
Q 013761          363 GG  364 (437)
Q Consensus       363 ~~  364 (437)
                      ..
T Consensus       233 s~  234 (285)
T 3sc4_A          233 NK  234 (285)
T ss_dssp             TS
T ss_pred             CC
Confidence            43

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.75  E-value=1.9e-17  Score=161.02  Aligned_cols=148  Identities=22%  Similarity=0.157  Sum_probs=104.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC----------------cH--H---HHhhCCCCeEEEEecCCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA----------------DQ--E---VVDMLPRSVEIVLGDVGD  216 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~----------------~~--~---~~~~~~~~v~~v~~Dltd  216 (437)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.                +.  +   ........+.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            47899999999999999999999999999999999872                11  1   112235678999999999


Q ss_pred             HHHHHHHHh-------cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhh
Q 013761          217 PCTLKAAVE-------NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSK  278 (437)
Q Consensus       217 ~~~v~~a~~-------~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk  278 (437)
                      +++++++++       .+|+||||||+...          .|++++++|+.|++++++++.      +.|.... .+   
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~------~~~~~~~~~g---  158 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGV------PHMIAGGRGG---  158 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHTSCE---
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH------HHHHhCCCCc---
Confidence            999999887       46999999997432          156789999999999999984      3332211 11   


Q ss_pred             hhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhc
Q 013761          279 LLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       279 ~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                          +++..++.......|  ....|..+|.+...+......
T Consensus       159 ----~iv~isS~~~~~~~~--~~~~Y~asKaa~~~~~~~la~  194 (286)
T 3uve_A          159 ----SIILTSSVGGLKAYP--HTGHYVAAKHGVVGLMRAFGV  194 (286)
T ss_dssp             ----EEEEECCGGGTSCCT--TCHHHHHHHHHHHHHHHHHHH
T ss_pred             ----EEEEECchhhccCCC--CccHHHHHHHHHHHHHHHHHH
Confidence                344444443322222  245577777666555543333

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.75  E-value=1.4e-17  Score=161.20  Aligned_cols=146  Identities=16%  Similarity=0.124  Sum_probs=105.9

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +.+.+|+||||||+||||++++++|+++|++|++++|+.+..     ...+.++.+|++|.++++++++       .+|+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            347899999999999999999999999999999999986531     2357789999999999999887       4699


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+....         +++++++|+.|++++++++      ++.|.....+       +++..++.......|  .
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~~~~--~  149 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYT------IPVMLAIGHG-------SIINIASVQSYAATK--N  149 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTSBCT--T
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHHcCCC-------EEEEECchhhccCCC--C
Confidence            99999975421         5678999999999999998      3333322111       344444443322222  2


Q ss_pred             cchhhhhhhhcccchhhhhccc
Q 013761          301 FQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ...|+.+|.+.+.+......++
T Consensus       150 ~~~Y~asKaa~~~l~~~la~e~  171 (269)
T 3vtz_A          150 AAAYVTSKHALLGLTRSVAIDY  171 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHh
Confidence            4567777777666655444443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.75  E-value=1.9e-17  Score=164.14  Aligned_cols=105  Identities=19%  Similarity=0.269  Sum_probs=86.8

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC------------cH--H---HHhhCCCCeEEEEecCCCHHH
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA------------DQ--E---VVDMLPRSVEIVLGDVGDPCT  219 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~------------~~--~---~~~~~~~~v~~v~~Dltd~~~  219 (437)
                      .++.+|++|||||+||||+++++.|+++|++|++++|+.            +.  +   ........+.++.+|++|+++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            347899999999999999999999999999999998862            11  1   122335678999999999999


Q ss_pred             HHHHHh-------cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          220 LKAAVE-------NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       220 v~~a~~-------~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ++++++       .+|+||||||+...         .|++++++|+.|++++++++.+
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  179 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLP  179 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            999887       46999999997542         1567899999999999999843

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.75  E-value=1.5e-17  Score=159.41  Aligned_cols=103  Identities=21%  Similarity=0.228  Sum_probs=86.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      .|.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++       
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3778999999999999999999999999999999998652  11   12234578899999999999998887       


Q ss_pred             cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      .+|+||||||+...          .|++.+++|+.|++++++++.
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  135 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVV  135 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            57999999997431          156789999999999999984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.75  E-value=1.6e-17  Score=160.05  Aligned_cols=103  Identities=17%  Similarity=0.224  Sum_probs=86.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      .|.+|++|||||+||||++++++|+++|++|++++|+.+.  +   .+......+.++.+|++|+++++++++       
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999999998652  1   122335678999999999999999887       


Q ss_pred             cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      .+|+||||||....          .+++.+++|+.|++++++++.
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  132 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFT  132 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45999999987421          156789999999999999984

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.75  E-value=1.6e-17  Score=161.06  Aligned_cols=106  Identities=24%  Similarity=0.237  Sum_probs=88.2

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC------------cH--H---HHhhCCCCeEEEEecCCCHHH
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA------------DQ--E---VVDMLPRSVEIVLGDVGDPCT  219 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~------------~~--~---~~~~~~~~v~~v~~Dltd~~~  219 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|+.            +.  +   ........+.++.+|++|.++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            347899999999999999999999999999999999872            11  1   122335678999999999999


Q ss_pred             HHHHHh-------cccEEEEeccCCCC-------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          220 LKAAVE-------NCNKIIYCATARST-------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       220 v~~a~~-------~~D~VIh~Ag~~~~-------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ++++++       .+|+||||||+...       .+++.+++|+.|++++++++...
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  142 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPY  142 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence            998887       56999999997542       26779999999999999999554

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.75  E-value=1.5e-17  Score=159.21  Aligned_cols=205  Identities=19%  Similarity=0.084  Sum_probs=130.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++...+.++.+|++|.++++++++       .+|+
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            678999999999999999999999999999999998763  2334456689999999999999999887       4599


Q ss_pred             EEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ||||||+...          .+++.+++|+.|++++++++.      +.|.....   +.....++..++.......|  
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~~~~~~~---~~~~~~iv~isS~~~~~~~~--  155 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLI------PHFKENGA---KGQECVILNVASTGAGRPRP--  155 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHHH---TTCCEEEEEECCTTTTSCCT--
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH------HHHHhcCC---CCCCeEEEEeCchhhcCCCC--
Confidence            9999997541          145689999999999999983      33322110   00001244444443322222  


Q ss_pred             ccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCcc-------ceecccc--CCC---cccHHHHHHHHHHH
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGY-------VELSKKL--SLP---LGCTLDRYEGLVLS  361 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~-------~~i~~~~--~~p---~g~v~D~~~gi~l~  361 (437)
                      ....|..+|.+.+.+......++.   .   .+.++.+.++.-.       ......+  ..|   .+..+|++++++..
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  235 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFL  235 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHH
Confidence            355688888877766644444432   2   2233333322110       0000000  011   23688999988877


Q ss_pred             hc-----cCCcEEEEEcc
Q 013761          362 VG-----GNGRSYVLILE  374 (437)
Q Consensus       362 ~~-----~~Ge~y~l~l~  374 (437)
                      +.     -.|+.+.+.++
T Consensus       236 ~s~~~~~itG~~i~vdgG  253 (261)
T 3n74_A          236 CSPQASMITGVALDVDGG  253 (261)
T ss_dssp             TSGGGTTCCSCEEEESTT
T ss_pred             cCCcccCcCCcEEEecCC
Confidence            62     35888877544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.75  E-value=1.1e-17  Score=160.47  Aligned_cols=203  Identities=16%  Similarity=0.108  Sum_probs=128.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHh---hCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVD---MLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+..   ..+   .....+.++.+|++|.++++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999998876521   111   223578999999999999999887       


Q ss_pred             cccEEEEeccCC--CC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          226 NCNKIIYCATAR--ST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 ~~D~VIh~Ag~~--~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                      .+|+||||||+.  ..         .+++.+++|+.|++++++++      ++.|.....+       +++..++.....
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~~~g-------~iv~iss~~~~~  151 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLV------VPVMRKQNFG-------RIINYGFQGADS  151 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCTTGGG
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHH------HHHHHhcCCC-------eEEEEeechhcc
Confidence            569999999942  11         15678999999999999998      3333221111       233333331111


Q ss_pred             eccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccce---ecc----c-cCCCcccHHHHHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVE---LSK----K-LSLPLGCTLDRYEGLVL  360 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~---i~~----~-~~~p~g~v~D~~~gi~l  360 (437)
                      ..+......|+.+|.+.+.+......+.   +.   .+.++.+.++.....   ...    . .....+..+|++++++.
T Consensus       152 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~  231 (264)
T 3i4f_A          152 APGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISF  231 (264)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHH
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence            1222235678888887766654443332   22   233333333321000   000    0 00112367899998887


Q ss_pred             Hhc-----cCCcEEEEEcc
Q 013761          361 SVG-----GNGRSYVLILE  374 (437)
Q Consensus       361 ~~~-----~~Ge~y~l~l~  374 (437)
                      .+.     -.|+.+.+.++
T Consensus       232 l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          232 LCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             HHSGGGTTCCSCEEEESCS
T ss_pred             HcCcccCCCCCcEEEEcCc
Confidence            763     24888877544

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.75  E-value=1.5e-17  Score=160.53  Aligned_cols=150  Identities=18%  Similarity=0.177  Sum_probs=107.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHh---cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVE---NC  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~---~~  227 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++     ...+.++.+|++|.++++++++   .+
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            3778999999999999999999999999999999998652  112211     3467889999999999999987   46


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||+....         |++.+++|+.|++++++++      ++.|.....+       +++..++.....  |.
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~~~~g-------~iv~isS~~~~~--~~  151 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSY------LKKMIERKEG-------RVIFIASEAAIM--PS  151 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTEE-------EEEEECCGGGTS--CC
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhCCCC-------EEEEEcchhhcc--CC
Confidence            9999999975421         5668999999999999998      4444322211       344444443322  22


Q ss_pred             cccchhhhhhhhcccchhhhhccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .....|..+|.+...+......+.
T Consensus       152 ~~~~~Y~asKaa~~~l~~~la~e~  175 (267)
T 3t4x_A          152 QEMAHYSATKTMQLSLSRSLAELT  175 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHh
Confidence            235567777777666554444443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.75  E-value=1.8e-17  Score=157.71  Aligned_cols=102  Identities=23%  Similarity=0.298  Sum_probs=84.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec-CCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R-~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      |++|++|||||+||||++++++|+++|++|++++| +.+.  +.   +......+.++.+|++|+++++++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999 4431  11   12234578899999999999999887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      .+|+||||||+...         .+++++++|+.|++++++++.
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  125 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVS  125 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            57999999997532         156789999999999999884

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.75  E-value=1.3e-17  Score=162.06  Aligned_cols=150  Identities=17%  Similarity=0.151  Sum_probs=110.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE------N  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~------~  226 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++      .
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999999999999999998752  22   22335678999999999999998887      5


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+||||||+....         +++.+++|+.|++++++++      ++.|.....+       +++..++.....  |
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~Iv~isS~~~~~--~  174 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSA------LPKMVARKWG-------RVVSIGSINQLR--P  174 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTS--C
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCc-------EEEEECCHHhCC--C
Confidence            69999999974321         5678999999999999999      4444322211       345545443322  3


Q ss_pred             Ccccchhhhhhhhcccchhhhhccc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ......|+.+|.+...+......++
T Consensus       175 ~~~~~~Y~asKaa~~~l~~~la~e~  199 (275)
T 4imr_A          175 KSVVTAYAATKAAQHNLIQSQARDF  199 (275)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHh
Confidence            3334568888877766655444443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.75  E-value=6.5e-18  Score=164.93  Aligned_cols=110  Identities=20%  Similarity=0.265  Sum_probs=93.8

Q ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccE
Q 013761          155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNK  229 (437)
Q Consensus       155 ~~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~  229 (437)
                      .++++.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++.   +|+
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            3456889999999999999999999999999999999998763  23444566899999999999999999985   599


Q ss_pred             EEEeccCCCC-------chhhHHHHHHHHHHHHHHHHHhcCC
Q 013761          230 IIYCATARST-------ITGDLFRVDYQGVYNVTKAFQDFNN  264 (437)
Q Consensus       230 VIh~Ag~~~~-------~~~~~~~vNv~gt~~l~~aa~~~gv  264 (437)
                      ||||||+...       .+++++++|+.|++++++++.+...
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~  131 (291)
T 3rd5_A           90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT  131 (291)
T ss_dssp             EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999997542       3677999999999999999965543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.75  E-value=1.4e-17  Score=157.44  Aligned_cols=103  Identities=22%  Similarity=0.260  Sum_probs=85.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~  233 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.. ..+.++.+|++|.++++++++.   +|+||||
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            678999999999999999999999999999999998652  122222 3567889999999999999974   6999999


Q ss_pred             ccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          234 ATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       234 Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ||....         .+++.+++|+.|++++++++.+.
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  121 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD  121 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            997532         14668999999999999988553

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.75  E-value=8.5e-18  Score=160.83  Aligned_cols=103  Identities=17%  Similarity=0.146  Sum_probs=86.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++...+.++.+|++|+++++++++.       +|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3778999999999999999999999999999999998652  22233355789999999999999988875       49


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +||||||+...         .+++.+++|+.|++++++++.
T Consensus        83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  123 (253)
T 1hxh_A           83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI  123 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHH
Confidence            99999997532         156789999999999999883

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.75  E-value=9.7e-18  Score=162.05  Aligned_cols=204  Identities=15%  Similarity=0.116  Sum_probs=127.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec-CCcH--HHHhhC----CCCeEEEEecCCCH----HHHHHHHh--
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQ--EVVDML----PRSVEIVLGDVGDP----CTLKAAVE--  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R-~~~~--~~~~~~----~~~v~~v~~Dltd~----~~v~~a~~--  225 (437)
                      |.+|++|||||+||||++++++|+++|++|++++| +.+.  +..+++    +..+.++.+|++|.    ++++++++  
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 6442  112221    45789999999999    99988887  


Q ss_pred             -----cccEEEEeccCCC--------------------CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhh
Q 013761          226 -----NCNKIIYCATARS--------------------TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLL  280 (437)
Q Consensus       226 -----~~D~VIh~Ag~~~--------------------~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~  280 (437)
                           .+|+||||||+..                    ..+++++++|+.|++++++++.+.      |. ... ..+..
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~-~~~-~~~~~  160 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARR------QG-EGG-AWRSR  160 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHT------C---------CC
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHH------Hh-cCC-CCCCC
Confidence                 5699999999743                    224568999999999999999553      32 110 00000


Q ss_pred             hhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccce-----eccccC-CC-
Q 013761          281 LAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVE-----LSKKLS-LP-  347 (437)
Q Consensus       281 ~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~-----i~~~~~-~p-  347 (437)
                      ..+++..++.......|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++.....     ...... .. 
T Consensus       161 ~g~iv~isS~~~~~~~~--~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~  238 (276)
T 1mxh_A          161 NLSVVNLCDAMTDLPLP--GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQS  238 (276)
T ss_dssp             CEEEEEECCGGGGSCCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSC
T ss_pred             CcEEEEECchhhcCCCC--CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCCccCCHHHHHHHHhcCCCCCC
Confidence            01355555544332222  34568888877766554433332   22   233444444310000     000111 11 


Q ss_pred             cccHHHHHHHHHHHhcc-----CCcEEEEE
Q 013761          348 LGCTLDRYEGLVLSVGG-----NGRSYVLI  372 (437)
Q Consensus       348 ~g~v~D~~~gi~l~~~~-----~Ge~y~l~  372 (437)
                      .+..+|++++++..+..     .|+.+.+.
T Consensus       239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vd  268 (276)
T 1mxh_A          239 EASAAQIADAIAFLVSKDAGYITGTTLKVD  268 (276)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence            34688999888877631     47777663

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.74  E-value=2.8e-17  Score=161.40  Aligned_cols=149  Identities=20%  Similarity=0.197  Sum_probs=107.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc----------H----H---HHhhCCCCeEEEEecCCCHHHH
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD----------Q----E---VVDMLPRSVEIVLGDVGDPCTL  220 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~----------~----~---~~~~~~~~v~~v~~Dltd~~~v  220 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+..          .    +   .+......+.++.+|++|.+++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            478999999999999999999999999999999998721          1    1   1223456899999999999999


Q ss_pred             HHHHh-------cccEEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhh
Q 013761          221 KAAVE-------NCNKIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLA  282 (437)
Q Consensus       221 ~~a~~-------~~D~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~  282 (437)
                      +++++       .+|+||||||+....          |++.+++|+.|++++++++      ++.|.... .+       
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~~g-------  171 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVA------IPHIMAGKRGG-------  171 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTSCE-------
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHhcCCCc-------
Confidence            99887       469999999975321          5679999999999999998      33332211 11       


Q ss_pred             hhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          283 KFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       283 k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +++..+++......|  ....|+.+|.+...+......+
T Consensus       172 ~Iv~isS~~~~~~~~--~~~~Y~asKaa~~~l~~~la~e  208 (299)
T 3t7c_A          172 SIVFTSSIGGLRGAE--NIGNYIASKHGLHGLMRTMALE  208 (299)
T ss_dssp             EEEEECCGGGTSCCT--TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECChhhccCCC--CcchHHHHHHHHHHHHHHHHHH
Confidence            344444443332222  2456777777666555443333

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.74  E-value=3.3e-17  Score=158.39  Aligned_cols=105  Identities=14%  Similarity=0.144  Sum_probs=88.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++++...   .   .+...+..+.++.+|++|.++++++++      
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999998876542   1   122345678999999999999998887      


Q ss_pred             -cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 -NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       .+|+||||||+...         .|++.+++|+.|++++++++.+.
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  141 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRH  141 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence             45999999998542         15678999999999999999554

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.74  E-value=2.7e-17  Score=159.41  Aligned_cols=149  Identities=18%  Similarity=0.210  Sum_probs=105.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC-------------CcH--H---HHhhCCCCeEEEEecCCCHHH
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK-------------ADQ--E---VVDMLPRSVEIVLGDVGDPCT  219 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~-------------~~~--~---~~~~~~~~v~~v~~Dltd~~~  219 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+             .+.  +   ........+.++.+|++|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4789999999999999999999999999999999984             111  1   122335678999999999999


Q ss_pred             HHHHHhc-------ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhh
Q 013761          220 LKAAVEN-------CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLA  282 (437)
Q Consensus       220 v~~a~~~-------~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~  282 (437)
                      ++++++.       +|+||||||+....         +++.+++|+.|++++++++      ++.|.... .+       
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~~g-------  154 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAG------APRIIEGGRGG-------  154 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTSCE-------
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHH------HHHHHhcCCCC-------
Confidence            9988874       69999999985432         5678999999999999998      33332211 11       


Q ss_pred             hhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          283 KFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       283 k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +++..++.......|  ....|..+|.+...+......+
T Consensus       155 ~iv~isS~~~~~~~~--~~~~Y~asKaa~~~~~~~la~e  191 (277)
T 3tsc_A          155 SIILISSAAGMKMQP--FMIHYTASKHAVTGLARAFAAE  191 (277)
T ss_dssp             EEEEECCGGGTSCCS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEccHhhCCCCC--CchhhHHHHHHHHHHHHHHHHH
Confidence            344444443332222  2455777776666555433333

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.74  E-value=5.8e-18  Score=168.01  Aligned_cols=230  Identities=11%  Similarity=-0.006  Sum_probs=144.5

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC----------CcH--H---HHhhCCCCeEEEEecCCCHHHHH
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK----------ADQ--E---VVDMLPRSVEIVLGDVGDPCTLK  221 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~----------~~~--~---~~~~~~~~v~~v~~Dltd~~~v~  221 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|+          .+.  .   .+......+.++.+|++|.++++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            34789999999999999999999999999999999987          331  1   12233557889999999999999


Q ss_pred             HHHh-------cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhc
Q 013761          222 AAVE-------NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFK  285 (437)
Q Consensus       222 ~a~~-------~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v  285 (437)
                      ++++       .+|+||||||+...         .+++++++|+.|++++++++..      .|....... +....+++
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~------~~~~~~~~~-~~~~g~IV  175 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAA------YWRGLSKAG-KAVDGRII  175 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHTT-CCCCEEEE
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHHccccC-CCCCcEEE
Confidence            8887       56999999998542         1567899999999999999843      322100000 00001355


Q ss_pred             cCCCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce-ec-----cc----c-CCCcccHHHH
Q 013761          286 SADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE-LS-----KK----L-SLPLGCTLDR  354 (437)
Q Consensus       286 ~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~-i~-----~~----~-~~p~g~v~D~  354 (437)
                      ..++.......|  ....|+.+|.+.+.+......+.+..-+......|+ ... ..     ..    . .......+|+
T Consensus       176 ~isS~~~~~~~~--~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedv  252 (322)
T 3qlj_A          176 NTSSGAGLQGSV--GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPENV  252 (322)
T ss_dssp             EECCHHHHHCBT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCGGGT
T ss_pred             EEcCHHHccCCC--CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCHHHH
Confidence            555544332223  356788888887776655444432211111222222 100 00     00    0 0111257788


Q ss_pred             HHHHHHHhc-----cCCcEEEEEccCCCC------------CCCCcHHHHHHHHHhhhC
Q 013761          355 YEGLVLSVG-----GNGRSYVLILEAGPS------------ADRSQSKLYFARFSTKVG  396 (437)
Q Consensus       355 ~~gi~l~~~-----~~Ge~y~l~l~~~~~------------~~~~s~~e~~~~i~~~~G  396 (437)
                      +++++..+.     -.|+.+.+.++....            +...++.|+++.+.+.+|
T Consensus       253 a~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~  311 (322)
T 3qlj_A          253 SPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLG  311 (322)
T ss_dssp             HHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHH
T ss_pred             HHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhh
Confidence            888887762     258888776553210            012256888888888877

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.74  E-value=2.9e-17  Score=155.43  Aligned_cols=103  Identities=18%  Similarity=0.251  Sum_probs=81.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +.+|+||||||+||||++++++|+++|++|+++ .|+.+.  +.   +.....++.++.+|++|.++++++++       
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999 555442  11   12235578999999999999998887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      .+|+||||||....         .+++.+++|+.|++++++++.+
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  127 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSK  127 (247)
T ss_dssp             CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            57999999997532         2567999999999999998854

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.74  E-value=5.2e-17  Score=156.09  Aligned_cols=203  Identities=19%  Similarity=0.132  Sum_probs=129.8

Q ss_pred             CCCCCCCEEEEECCCC-hHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hC-CCCeEEEEecCCCHHHHHHHHhc--
Q 013761          156 IPGAQNTTVLVVGATS-RIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---ML-PRSVEIVLGDVGDPCTLKAAVEN--  226 (437)
Q Consensus       156 ~~~l~~k~vLVTGAtG-~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~-~~~v~~v~~Dltd~~~v~~a~~~--  226 (437)
                      ..++.+|++|||||+| |||++++++|+++|++|++++|+.+.  +..+   .. ...+.++.+|++|.++++++++.  
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            3457899999999996 89999999999999999999998652  1222   22 35799999999999999998874  


Q ss_pred             -----ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          227 -----CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       227 -----~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                           +|+||||||+....         +++.+++|+.|++++++++.+      .|.....+      .+++..++...
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~~------~~iv~~sS~~~  164 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALR------YFRGVDHG------GVIVNNASVLG  164 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHHTSSCC------EEEEEECCGGG
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH------HHHhcCCC------eEEEEeCCHHH
Confidence                 59999999975421         567899999999999999943      33322110      13444444433


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc----eecccc-----CCCcccHHHHHHH
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV----ELSKKL-----SLPLGCTLDRYEG  357 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~----~i~~~~-----~~p~g~v~D~~~g  357 (437)
                      ....|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++....    .....+     ....+..+|++++
T Consensus       165 ~~~~~--~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          165 WRAQH--SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             TCCCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHH
T ss_pred             cCCCC--CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence            22222  35678888887776665444432   22   22333333321100    000000     0112368899998


Q ss_pred             HHHHhc-----cCCcEEEEE
Q 013761          358 LVLSVG-----GNGRSYVLI  372 (437)
Q Consensus       358 i~l~~~-----~~Ge~y~l~  372 (437)
                      ++..+.     -.|+.+.+.
T Consensus       243 i~~l~s~~~~~~tG~~i~vd  262 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVS  262 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHcCccccCccCCEEEEc
Confidence            887663     347777664

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.74  E-value=3.6e-17  Score=164.45  Aligned_cols=192  Identities=16%  Similarity=0.088  Sum_probs=130.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH------------HHHhhCCCCeEEEEecCCCHHHHHHHHh
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ------------EVVDMLPRSVEIVLGDVGDPCTLKAAVE  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~------------~~~~~~~~~v~~v~~Dltd~~~v~~a~~  225 (437)
                      +|.+|+||||||+||||++++++|+++|++|++++|+.+.            +.+......+.++.+|++|+++++++++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999998652            1122335678999999999999999887


Q ss_pred             -------cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCC
Q 013761          226 -------NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADS  289 (437)
Q Consensus       226 -------~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ss  289 (437)
                             .+|+||||||+...         .+++++++|+.|++++++++      ++.|.....+       +++..++
T Consensus       122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------lp~m~~~~~g-------~IV~iSS  188 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKAC------IPYLKKSKVA-------HILNISP  188 (346)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHH------HHHHTTCSSC-------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHCCCC-------EEEEECC
Confidence                   56999999997532         15678999999999999999      5555433222       4555555


Q ss_pred             CcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee------c-cccCCCcccHHHHHHHHHHHh
Q 013761          290 LNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL------S-KKLSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       290 l~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i------~-~~~~~p~g~v~D~~~gi~l~~  362 (437)
                      .......+......|..+|.+...+......+++ .-+......|+..+..      . .......+..+|++++++..+
T Consensus       189 ~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA~~v~~L~  267 (346)
T 3kvo_A          189 PLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIF  267 (346)
T ss_dssp             CCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccccccccCCCHHHHHHHHHHHH
Confidence            4433221122356788999887777665555544 2222233334321110      0 000011225678999888877


Q ss_pred             c
Q 013761          363 G  363 (437)
Q Consensus       363 ~  363 (437)
                      .
T Consensus       268 s  268 (346)
T 3kvo_A          268 Q  268 (346)
T ss_dssp             T
T ss_pred             h
Confidence            4

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.74  E-value=2.9e-17  Score=159.02  Aligned_cols=102  Identities=18%  Similarity=0.195  Sum_probs=85.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHh--------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVE--------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~--------  225 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..   ......+.++.+|++|+++++++++        
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  111   2234578899999999999988884        


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      .+|+||||||+...         .+++.+++|+.|++++++++.
T Consensus        99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  142 (273)
T 1ae1_A           99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY  142 (273)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            47999999997532         256789999999999999983

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.74  E-value=2.5e-17  Score=159.68  Aligned_cols=192  Identities=13%  Similarity=0.033  Sum_probs=126.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---------HH---HhhCCCCeEEEEecCCCHHHHHHHHh-
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---------EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---------~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-  225 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+.         +.   .......+.++.+|++|.++++++++ 
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            788999999999999999999999999999999998641         11   11225578999999999999998887 


Q ss_pred             ------cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          226 ------NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       226 ------~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                            .+|+||||||+....         +++++++|+.|++++++++      ++.|.....+       +++..++.
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~iv~isS~  150 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQAC------LPHLLQAPNP-------HILTLAPP  150 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHH------HHHHTTSSSC-------EEEECCCC
T ss_pred             HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHH------HHHHHhcCCc-------eEEEECCh
Confidence                  469999999975321         5678999999999999999      5555433222       45555555


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce--ecccc----CCCcccHHHHHHHHHHHhc
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--LSKKL----SLPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--i~~~~----~~p~g~v~D~~~gi~l~~~  363 (437)
                      ......+......|+.+|.+...+......+.+..-+......|+.++.  ....+    ....+..+|++++++..+.
T Consensus       151 ~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~s  229 (274)
T 3e03_A          151 PSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHAVLT  229 (274)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHHHHHHHT
T ss_pred             HhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccccccccCCHHHHHHHHHHHhC
Confidence            4332211112456888888777666544444432212222233332111  00000    0112346788888887773

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.74  E-value=2.1e-17  Score=158.64  Aligned_cols=103  Identities=17%  Similarity=0.125  Sum_probs=85.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H--HHhhC----CCCeEEEEecCCCHHHHHHHHh------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E--VVDML----PRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~--~~~~~----~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+. .  ..+.+    +..+.++.+|++|+++++++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999998653 1  11111    4568899999999999998887      


Q ss_pred             -cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 -NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                       .+|+||||||+...         .+++.+++|+.|++++++++.+
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  127 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALP  127 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             47999999997542         1567899999999999999843

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.74  E-value=1.4e-17  Score=158.36  Aligned_cols=207  Identities=17%  Similarity=0.076  Sum_probs=128.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC-CcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK-ADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~-~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      +|.+|+||||||+||||++++++|+++|++|++++|+ .+.  ..   +.....++.++.+|++|+++++++++      
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999998 542  11   12224578999999999999999988      


Q ss_pred             -cccEEEEeccC-CCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          226 -NCNKIIYCATA-RST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       226 -~~D~VIh~Ag~-~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                       ++|+||||||. ...         .+++.+++|+.|++++++++.+      .|.....  ......+++..++.....
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~------~~~~~~~--~~~~~~~iv~~sS~~~~~  155 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALP------HLAAAAK--ASGQTSAVISTGSIAGHT  155 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHHH--HHTSCEEEEEECCTHHHH
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHH------HHHhccc--CCCCCcEEEEecchhhcc
Confidence             68999999997 321         1456899999999999998833      2221100  000001334434332211


Q ss_pred             eccCcccchhhhhhhhcccchhhhhccc---ccc---eeeeeeeccCccc---ee----ccccC-CCcccHHHHHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSET---GDA---VFSGYVFTRGGYV---EL----SKKLS-LPLGCTLDRYEGLVL  360 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~~---v~~g~~~~~~G~~---~i----~~~~~-~p~g~v~D~~~gi~l  360 (437)
                       .+......|+.+|...+.+......+.   +..   +.++.+.++....   ..    ..... ...++++|++++++.
T Consensus       156 -~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (258)
T 3afn_B          156 -GGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLF  234 (258)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHH
Confidence             022234567888877766554433332   322   2233333321100   00    00001 123468899998887


Q ss_pred             Hhcc------CCcEEEEEc
Q 013761          361 SVGG------NGRSYVLIL  373 (437)
Q Consensus       361 ~~~~------~Ge~y~l~l  373 (437)
                      .+..      .|+.|.+..
T Consensus       235 l~~~~~~~~~~G~~~~v~g  253 (258)
T 3afn_B          235 FASHLASGYITGQVLDING  253 (258)
T ss_dssp             HHCHHHHTTCCSEEEEEST
T ss_pred             HhCcchhccccCCEEeECC
Confidence            7631      477777643

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.74  E-value=6.2e-17  Score=156.95  Aligned_cols=200  Identities=15%  Similarity=0.099  Sum_probs=131.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++++...   +   .+...+..+.++.+|++|+++++++++      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999999999999999999876542   1   122335678999999999999999887      


Q ss_pred             -cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|+||||||+...         .|++.+++|+.|++++++++.+      .|...  +       +++..++..... 
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~------~m~~~--g-------~iv~isS~~~~~-  171 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASR------HLGDG--G-------RIITIGSNLAEL-  171 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HCCTT--C-------EEEEECCGGGTC-
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH------HHhcC--C-------EEEEEeChhhcc-
Confidence             56999999997542         1567899999999999999944      33211  1       344433322211 


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccce--e----ccc-cCCCcccHHHHHHHHHHHh
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVE--L----SKK-LSLPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~--i----~~~-~~~p~g~v~D~~~gi~l~~  362 (437)
                      .|......|..+|.+.+.+......+.   +.   .+.++.+.++.....  .    ... .....+..+|++++++..+
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          172 VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            111235678888887776665444443   22   233444444321100  0    000 1112236788888877666


Q ss_pred             c-----cCCcEEEEEc
Q 013761          363 G-----GNGRSYVLIL  373 (437)
Q Consensus       363 ~-----~~Ge~y~l~l  373 (437)
                      .     -.|+.+.+.+
T Consensus       252 s~~~~~itG~~i~vdG  267 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDG  267 (271)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CcccCCccCCEEEeCc
Confidence            2     3477777743

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.74  E-value=2.8e-17  Score=157.69  Aligned_cols=102  Identities=17%  Similarity=0.256  Sum_probs=85.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHh------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++     ...+.++.+|++|+++++++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999998652  111221     2278899999999999999987      


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ++|+||||||+...         .+++.+++|+.|++++++++.
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  128 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAA  128 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            58999999997532         256789999999999999884

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.74  E-value=2.6e-17  Score=157.16  Aligned_cols=201  Identities=16%  Similarity=0.105  Sum_probs=127.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec-CCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R-~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      .+.+|+||||||+||||++++++|+++|++|+++++ +.+.  .   ........+.++.+|++|.++++++++      
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            367899999999999999999999999999999884 4331  1   222345678999999999999999887      


Q ss_pred             -cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|+||||||+...         .+++.+++|+.|++++++++      ++.|.....+       +++..++......
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~~  156 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQV------IDGMVERGWG-------RIINISSVNGQKG  156 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCCCGGGS
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCC-------EEEEEcchhhccC
Confidence             45999999997542         15679999999999999998      4433322111       3555555443322


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc---e----eccc-cCCCcccHHHHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV---E----LSKK-LSLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~---~----i~~~-~~~p~g~v~D~~~gi~l~  361 (437)
                      .|  ....|+.+|.+.+.+......+..   .   .+.++.+.++....   .    .... .....+..+|++++++..
T Consensus       157 ~~--~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  234 (256)
T 3ezl_A          157 QF--GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWL  234 (256)
T ss_dssp             CS--CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred             CC--CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            22  356788888877666544444332   2   12222222211000   0    0000 111223678898888776


Q ss_pred             hc-----cCCcEEEEEc
Q 013761          362 VG-----GNGRSYVLIL  373 (437)
Q Consensus       362 ~~-----~~Ge~y~l~l  373 (437)
                      +.     -.|+.+.+.+
T Consensus       235 ~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          235 ASEESGFSTGADFSLNG  251 (256)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCCcccCCcCcEEEECC
Confidence            62     3478777743

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.74  E-value=1.1e-17  Score=160.04  Aligned_cols=102  Identities=16%  Similarity=0.129  Sum_probs=86.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHh---hCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVD---MLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~---~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.+..+   ..+..+.++.+|++|+++++++++       ++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999987632222   224568889999999999999988       679


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +||||||+...         .+++.+++|+.|++++++++.
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  122 (255)
T 2q2v_A           82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLAL  122 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99999997532         156789999999999998873

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.73  E-value=2.7e-17  Score=155.55  Aligned_cols=101  Identities=21%  Similarity=0.227  Sum_probs=84.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+.  ...+.    .+..+.++.+|++|.++++++++       
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            678999999999999999999999999999999998652  11111    24578899999999999999987       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      ++|+||||||....         .+++.+++|+.|++++++++
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  127 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNS  127 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence            67999999997542         14568999999999999887

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.73  E-value=4.9e-17  Score=157.30  Aligned_cols=197  Identities=18%  Similarity=0.172  Sum_probs=127.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +.+|++|||||+||||++++++|+++|++|++++++...   +   ........+.++.+|++|+++++++++       
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999998665442   1   122345678999999999999999887       


Q ss_pred             cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          226 NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      .+|+||||||+....         |++.+++|+.|++++++++.      +.|...  +       +++..++.......
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~------~~~~~~--g-------~iv~isS~~~~~~~  169 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAA------QRLRVG--G-------RIINMSTSQVGLLH  169 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH------HHEEEE--E-------EEEEECCTHHHHCC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHH------HHHhhC--C-------eEEEEeChhhccCC
Confidence            469999999985421         56789999999999999994      444321  1       35555544333223


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc----eec----ccc-CCCcccHHHHHHHHHHH
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV----ELS----KKL-SLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~----~i~----~~~-~~p~g~v~D~~~gi~l~  361 (437)
                      |  ....|+.+|.+...+......+.+   .   .+.++.+.++....    ...    ... ....+..+|++++++..
T Consensus       170 ~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  247 (267)
T 3u5t_A          170 P--SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFL  247 (267)
T ss_dssp             T--TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHH
T ss_pred             C--CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            3  356688888877766654444432   2   23334333332100    000    000 01123678999888877


Q ss_pred             hc-----cCCcEEEEE
Q 013761          362 VG-----GNGRSYVLI  372 (437)
Q Consensus       362 ~~-----~~Ge~y~l~  372 (437)
                      +.     -.|+.+.+.
T Consensus       248 ~s~~~~~itG~~i~vd  263 (267)
T 3u5t_A          248 AGPDGAWVNGQVLRAN  263 (267)
T ss_dssp             HSTTTTTCCSEEEEES
T ss_pred             hCccccCccCCEEEeC
Confidence            63     247766663

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.73  E-value=2.2e-17  Score=158.11  Aligned_cols=191  Identities=14%  Similarity=0.093  Sum_probs=124.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----C-CCeEEEEecCCCHHHHHHHHhc----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----P-RSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~-~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.  +..+++     . ..+.++.+|++|.++++++++.    
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999998652  111111     2 5788999999999999988874    


Q ss_pred             ---ccEEEEeccCCCC--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 ---CNKIIYCATARST--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                         +|+||||||+...        .+++.+++|+.|++++++++      ++.|.....+       +++..++......
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~~~~  151 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTV------TEIMKVQKNG-------YIFNVASRAAKYG  151 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECC------
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHhCCCe-------EEEEEccHHhcCC
Confidence               5999999998532        15678999999999999999      4444322222       4555555443321


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCccceecccc-CCCcccHHHHHHHHHHHhccC
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYVELSKKL-SLPLGCTLDRYEGLVLSVGGN  365 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~~i~~~~-~~p~g~v~D~~~gi~l~~~~~  365 (437)
                      .+  ....|+.+|.+...+......+.+.      .+.++.+.++.... ....+ ....+..+|++++++..+..+
T Consensus       152 ~~--~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~p~dva~~v~~l~s~~  225 (250)
T 3nyw_A          152 FA--DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKK-AGTPFKDEEMIQPDDLLNTIRCLLNLS  225 (250)
T ss_dssp             -C--CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH-TTCCSCGGGSBCHHHHHHHHHHHHTSC
T ss_pred             CC--CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhh-cCCCcccccCCCHHHHHHHHHHHHcCC
Confidence            22  2567888888777666544444322      12222222211000 00000 011235788888888777543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.73  E-value=3.4e-17  Score=156.50  Aligned_cols=104  Identities=25%  Similarity=0.305  Sum_probs=86.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC---C-------CCeEEEEecCCCHHHHHHHHhc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML---P-------RSVEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~---~-------~~v~~v~~Dltd~~~v~~a~~~  226 (437)
                      |++|+||||||+||||++++++|+++|++|++++|+.+.  +..+.+   .       ..+.++.+|++|.++++++++.
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            678999999999999999999999999999999998652  222222   1       4678999999999999998876


Q ss_pred             c--------cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 C--------NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 ~--------D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +        |+||||||....         .+++.+++|+.|++++++++.+.
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  137 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQA  137 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            4        999999997542         15678999999999999998553

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.73  E-value=3.6e-17  Score=154.71  Aligned_cols=198  Identities=19%  Similarity=0.118  Sum_probs=125.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~  233 (437)
                      +.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+.+ ..+.++.+|++|.++++++++.   +|+||||
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-PGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            678999999999999999999999999999999998652  122223 2567789999999999999974   6999999


Q ss_pred             ccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          234 ATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       234 Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      ||.....         +++.+++|+.|++++++++.+.      |.... .       .+++..++.....  +......
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~~~-------~~iv~~sS~~~~~--~~~~~~~  148 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG------LIARGVP-------GAIVNVSSQCSQR--AVTNHSV  148 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCC-------EEEEEECCGGGTS--CCTTBHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhCCCC-------cEEEEeCchhhcc--CCCCCch
Confidence            9975321         4668999999999999998542      21110 0       0233333322211  1122456


Q ss_pred             hhhhhhhcccchhhhhccc---ccc---eeeeeeeccCccce-----e----ccc-cCCCcccHHHHHHHHHHHhc----
Q 013761          304 VVAFKYDAGMDAKFELSET---GDA---VFSGYVFTRGGYVE-----L----SKK-LSLPLGCTLDRYEGLVLSVG----  363 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~---~~~---v~~g~~~~~~G~~~-----i----~~~-~~~p~g~v~D~~~gi~l~~~----  363 (437)
                      |+.+|.+.+.+......+.   +..   +.++.+.++.....     .    ... .....++++|++++++..+.    
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            7777777666654433332   222   22333322221100     0    000 00112478999999988773    


Q ss_pred             -cCCcEEEEE
Q 013761          364 -GNGRSYVLI  372 (437)
Q Consensus       364 -~~Ge~y~l~  372 (437)
                       -.|+.|.+.
T Consensus       229 ~~~G~~~~v~  238 (244)
T 3d3w_A          229 MTTGSTLPVE  238 (244)
T ss_dssp             TCCSCEEEES
T ss_pred             CCCCCEEEEC
Confidence             247777663

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=7.1e-17  Score=153.82  Aligned_cols=101  Identities=22%  Similarity=0.318  Sum_probs=85.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+  .+.++.+|++|+++++++++.       +|+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            678999999999999999999999999999999998652  222233  378899999999999988875       699


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||+...         .+++.+++|+.|++++++++.+
T Consensus        81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  121 (245)
T 1uls_A           81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASE  121 (245)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            9999997532         1567899999999999999944

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.73  E-value=3.3e-17  Score=158.83  Aligned_cols=209  Identities=16%  Similarity=0.116  Sum_probs=133.6

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh------ccc
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE------NCN  228 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~------~~D  228 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++      .+|
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            34788999999999999999999999999999999998652  2334456789999999999999999887      469


Q ss_pred             EEEEe-ccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          229 KIIYC-ATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       229 ~VIh~-Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                      +|||| ||....              .+++.+++|+.|++++++++.....+...+.....+       +++..++....
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g-------~iv~isS~~~~  178 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERG-------ALVLTASIAGY  178 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCE-------EEEEECCGGGT
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCe-------EEEEEeccccc
Confidence            99999 554221              156789999999999999984322111000001111       35555554433


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCcc--ce-----eccccC--CCcccHHHHHHHH
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGY--VE-----LSKKLS--LPLGCTLDRYEGL  358 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~--~~-----i~~~~~--~p~g~v~D~~~gi  358 (437)
                      ...|  ....|+.+|.+...+......++..      .+.++.+.++...  ..     ......  ...+..+|+++++
T Consensus       179 ~~~~--~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v  256 (281)
T 3ppi_A          179 EGQI--GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAA  256 (281)
T ss_dssp             SCCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHH
T ss_pred             CCCC--CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            2223  3567888888777665444444322      2223333221100  00     000111  1223678999988


Q ss_pred             HHHhc---cCCcEEEEEcc
Q 013761          359 VLSVG---GNGRSYVLILE  374 (437)
Q Consensus       359 ~l~~~---~~Ge~y~l~l~  374 (437)
                      +..+.   -.|+.+.+.++
T Consensus       257 ~~l~s~~~~tG~~i~vdGG  275 (281)
T 3ppi_A          257 AFLLTNGYINGEVMRLDGA  275 (281)
T ss_dssp             HHHHHCSSCCSCEEEESTT
T ss_pred             HHHHcCCCcCCcEEEECCC
Confidence            87773   35777777443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.73  E-value=1.3e-17  Score=160.95  Aligned_cols=98  Identities=21%  Similarity=0.278  Sum_probs=85.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKI  230 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~V  230 (437)
                      +|.+|+||||||+||||++++++|+++|++|++++|+.+.      ...+.++.+|++|.++++++++       .+|+|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999997653      3468899999999999998887       47999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |||||+...         .+++.+++|+.|++++++++.+
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  118 (264)
T 2dtx_A           79 VNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIP  118 (264)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            999997532         2567899999999999999944

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.73  E-value=1.7e-17  Score=159.32  Aligned_cols=104  Identities=20%  Similarity=0.156  Sum_probs=87.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++       .+|
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            3678999999999999999999999999999999998652  2233444478899999999999999887       679


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||+...         .+++.+++|+.|++++++++.+
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  130 (263)
T 3ak4_A           89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACR  130 (263)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            99999997532         1567899999999999999854

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=4.4e-17  Score=157.25  Aligned_cols=105  Identities=26%  Similarity=0.346  Sum_probs=88.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++.       +|
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence            3678999999999999999999999999999999998652  23344556789999999999999988875       59


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +||||||+....         +++.+++|+.|++++++++.+.
T Consensus        83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  125 (263)
T 2a4k_A           83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV  125 (263)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            999999975421         4678999999999999999553

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.73  E-value=1.2e-17  Score=161.58  Aligned_cols=148  Identities=18%  Similarity=0.163  Sum_probs=109.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++       .
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  11   22335678899999999999998887       4


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+||||||+....         +++++++|+.|++++++++      ++.|.....+       +++..++.......|
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~IV~isS~~~~~~~~  148 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV------LPIMEAQRSG-------QIINIGSIGALSVVP  148 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTCCCT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhCCCe-------EEEEEcCHHHcccCC
Confidence            69999999985421         5678999999999999998      4444322222       455555554433333


Q ss_pred             Ccccchhhhhhhhcccchhhhhcc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                        ....|+.+|.+...+......+
T Consensus       149 --~~~~Y~asKaal~~l~~~la~e  170 (264)
T 3tfo_A          149 --TAAVYCATKFAVRAISDGLRQE  170 (264)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CChhHHHHHHHHHHHHHHHHHh
Confidence              2456888887766655443333

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.73  E-value=6.3e-17  Score=154.72  Aligned_cols=103  Identities=17%  Similarity=0.233  Sum_probs=88.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      +.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+.+...+.++.+|++|.++++++++       .+|+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            678999999999999999999999999999999998752  2333445678999999999999999887       6799


Q ss_pred             EEEeccCCCC---------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST---------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~---------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||....               .+++.+++|+.|++++++++.+
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  136 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAG  136 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999997532               1566899999999999999954

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.73  E-value=2.1e-17  Score=161.12  Aligned_cols=216  Identities=16%  Similarity=0.126  Sum_probs=140.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC-------cH-HHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA-------DQ-EVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~-------~~-~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      +|+|+||||||+||++|+++|+++|++|++++|+.       +. ..+..+ ..+++++.+|++|.+++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            56899999999999999999999999999999986       21 111111 2468999999999999999999999999


Q ss_pred             EeccCCCCchhhHHHHHHHHHHHHHHHHHhcC-CceeeeecC---------------CcchhhhhhhhhccCCCCcceee
Q 013761          232 YCATARSTITGDLFRVDYQGVYNVTKAFQDFN-NKLAQLRAG---------------KSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       232 h~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~g-vkl~~l~~~---------------~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      |+||...          +.++.++++++++++ ++....+.-               .| .+|..++.++...++.++++
T Consensus        82 ~~a~~~~----------~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~i~~~~l  150 (307)
T 2gas_A           82 CAAGRLL----------IEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAEGVPYTYL  150 (307)
T ss_dssp             ECSSSSC----------GGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEE
T ss_pred             ECCcccc----------cccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHH-HHHHHHHHHHHHcCCCeEEE
Confidence            9998643          456788999999998 763222210               12 44556666776778889999


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEE
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLI  372 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~  372 (437)
                      +|+.++...... ..  .... .....  .  ...+++.+   ...    .+..+++|++++++.++..   .|+.|.+.
T Consensus       151 rp~~~~~~~~~~-~~--~~~~-~~~~~--~--~~~~~~~~---~~~----~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~  215 (307)
T 2gas_A          151 CCHAFTGYFLRN-LA--QLDA-TDPPR--D--KVVILGDG---NVK----GAYVTEADVGTFTIRAANDPNTLNKAVHIR  215 (307)
T ss_dssp             ECCEETTTTGGG-TT--CTTC-SSCCS--S--EEEEETTS---CSE----EEEECHHHHHHHHHHHHTCGGGTTEEEECC
T ss_pred             Ecceeecccccc-cc--cccc-ccCCC--C--eEEEecCC---Ccc----eEEeeHHHHHHHHHHHHcCccccCceEEEe
Confidence            998665432111 00  0000 00000  0  00111111   111    1123689999999988843   25555442


Q ss_pred             ccCCCCCCCCcHHHHHHHHHhhhCCc--eecccCCC
Q 013761          373 LEAGPSADRSQSKLYFARFSTKVGFC--RVRVPFSS  406 (437)
Q Consensus       373 l~~~~~~~~~s~~e~~~~i~~~~G~~--~v~iP~~~  406 (437)
                       +.+   +.+|+.|+++.+.+.+|.+  ...+|...
T Consensus       216 -~~~---~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  247 (307)
T 2gas_A          216 -LPK---NYLTQNEVIALWEKKIGKTLEKTYVSEEQ  247 (307)
T ss_dssp             -CGG---GEEEHHHHHHHHHHHHTSCCEEEEECHHH
T ss_pred             -CCC---CcCCHHHHHHHHHHHhCCCCceeecCHHH
Confidence             221   2478999999999999942  23355433

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.73  E-value=3.2e-17  Score=158.19  Aligned_cols=202  Identities=18%  Similarity=0.132  Sum_probs=127.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH------HHhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE------VVDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~------~~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++++....      ........+.++.+|++|.++++++++      
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999654421      112235678999999999999998887      


Q ss_pred             -cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 -NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       .+|+||||||+....         ++..+++|+.|++++++++.      +.|.....+       +++..++......
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~------~~~~~~~~g-------~iv~isS~~~~~~  168 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFI------AGMVERRFG-------RIVNIGSVNGSRG  168 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHTCE-------EEEEECCHHHHHC
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHH------HHHHhcCCC-------EEEEeCChhhccC
Confidence             569999999975421         56789999999999999983      333211111       2444443322222


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc--------eecccc-CCCcccHHHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV--------ELSKKL-SLPLGCTLDRYEGLVL  360 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~--------~i~~~~-~~p~g~v~D~~~gi~l  360 (437)
                      .|  ....|+.+|.+...+......++   +.   .+.++.+.++....        ...... ....+..+|++++++.
T Consensus       169 ~~--~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          169 AF--GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             CT--TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHH
T ss_pred             CC--CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHH
Confidence            22  34567777776665554333332   21   23333333321100        000000 0112368899999887


Q ss_pred             Hhc-----cCCcEEEEEcc
Q 013761          361 SVG-----GNGRSYVLILE  374 (437)
Q Consensus       361 ~~~-----~~Ge~y~l~l~  374 (437)
                      .+.     -.|+.+.+.++
T Consensus       247 L~s~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGG  265 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTT
T ss_pred             HhCCCcCCeeCcEEEECCC
Confidence            763     24777777443

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.73  E-value=1.9e-17  Score=160.05  Aligned_cols=147  Identities=18%  Similarity=0.139  Sum_probs=105.0

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      ..+.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.    .+..+.++.+|++|.++++++++     
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999998652  11222    24578899999999999998887     


Q ss_pred             --cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc-ce
Q 013761          226 --NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN-GW  293 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~-~~  293 (437)
                        .+|+||||||+....         +++++++|+.|++++++++.      +.|.....+       +++..++.. ..
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~m~~~~~g-------~iv~isS~~~~~  163 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF------SLLRESDNP-------SIINIGSLTVEE  163 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH------HHHTTCSSC-------EEEEECCGGGTC
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH------HHHHHcCCc-------EEEEECCcchhc
Confidence              469999999975421         56789999999999999983      333322111       344444433 22


Q ss_pred             eeccCcccchhhhhhhhcccchhhh
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                      ...|  ....|..+|.+.+.+....
T Consensus       164 ~~~~--~~~~Y~asK~a~~~~~~~l  186 (267)
T 1vl8_A          164 VTMP--NISAYAASKGGVASLTKAL  186 (267)
T ss_dssp             CCSS--SCHHHHHHHHHHHHHHHHH
T ss_pred             cCCC--CChhHHHHHHHHHHHHHHH
Confidence            1112  2456777777666555433

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.73  E-value=4e-17  Score=157.28  Aligned_cols=105  Identities=10%  Similarity=0.161  Sum_probs=87.0

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-----HH---HhhCCCCeEEEEecCCCHHHHHHHHh---
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-----EV---VDMLPRSVEIVLGDVGDPCTLKAAVE---  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-----~~---~~~~~~~v~~v~~Dltd~~~v~~a~~---  225 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|....     +.   +...+..+.++.+|++|.++++++++   
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999886431     11   12234578999999999999999887   


Q ss_pred             ----cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          226 ----NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ----~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                          .+|+||||||+....         +++.+++|+.|++++++++.+
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  135 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAK  135 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                469999999975322         567899999999999999954

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.73  E-value=6.6e-17  Score=158.45  Aligned_cols=200  Identities=16%  Similarity=0.140  Sum_probs=131.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-------HHHhhCCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-------EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-------~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.       +.....+..+.++.+|++|.++++++++     
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999987431       1122345678999999999999988886     


Q ss_pred             --cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          226 --NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                        .+|+||||||+...          .|++.+++|+.|++++++++.      +.|...  +       +++..++....
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~------~~~~~~--g-------~Iv~isS~~~~  190 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAI------PLLPKG--A-------SIITTSSIQAY  190 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHG------GGCCTT--C-------EEEEECCGGGT
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH------HHhhcC--C-------EEEEECChhhc
Confidence              46999999997431          156799999999999999994      443221  1       34555544433


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccC----cc-ceecccc-----CCCcccHHHHHHH
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRG----GY-VELSKKL-----SLPLGCTLDRYEG  357 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~----G~-~~i~~~~-----~~p~g~v~D~~~g  357 (437)
                      ...|  ....|..+|.+.+.+......++   +.   .+.++.+.++.    +. ......+     ....+..+|++++
T Consensus       191 ~~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  268 (294)
T 3r3s_A          191 QPSP--HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPV  268 (294)
T ss_dssp             SCCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHH
T ss_pred             cCCC--CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            2222  34567777777666654443333   22   23333333321    00 0000001     0112367888888


Q ss_pred             HHHHhc-----cCCcEEEEEcc
Q 013761          358 LVLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       358 i~l~~~-----~~Ge~y~l~l~  374 (437)
                      ++..+.     -.|+.+.+.++
T Consensus       269 v~~L~s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          269 YVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCccccCCCCCEEEECCC
Confidence            887662     34887777443

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.73  E-value=2.3e-17  Score=162.31  Aligned_cols=105  Identities=15%  Similarity=0.104  Sum_probs=88.1

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      .++.+|+||||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++      
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            34789999999999999999999999999999999998652  11   22235578999999999999998887      


Q ss_pred             -cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          226 -NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                       .+|+||||||+....         +++.+++|+.|++++++++.+
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  152 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLP  152 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             569999999975321         567899999999999999843

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.73  E-value=4.1e-17  Score=158.51  Aligned_cols=203  Identities=13%  Similarity=0.103  Sum_probs=127.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++.  .++.++.+|++|.++++++++       .+
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            678999999999999999999999999999999998652  1222221  268889999999999998887       46


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||+...         .+++.+++|+.|++++++++.      +.|......   ....+++..++.......|+
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~------~~m~~~~~~---~~~g~iV~isS~~~~~~~~~  177 (276)
T 2b4q_A          107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLL------PLLRRSASA---ENPARVINIGSVAGISAMGE  177 (276)
T ss_dssp             SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHH------HHHHHHCCS---SSCEEEEEECCGGGTCCCCC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH------HHHHhccCC---CCCCEEEEECCHHHcCCCCC
Confidence            999999997532         156799999999999999983      333211110   00013444444433222222


Q ss_pred             cccc-hhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc---e----ecc--ccC-CCcccHHHHHHHHHHH
Q 013761          299 TYFQ-DVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV---E----LSK--KLS-LPLGCTLDRYEGLVLS  361 (437)
Q Consensus       299 ~~~~-~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~---~----i~~--~~~-~p~g~v~D~~~gi~l~  361 (437)
                        .. .|..+|.+.+.+......+.   +.   .+.++.+.++....   .    ...  ... ...+..+|++++++..
T Consensus       178 --~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  255 (276)
T 2b4q_A          178 --QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISL  255 (276)
T ss_dssp             --SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHH
T ss_pred             --CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHH
Confidence              33 67788877666554433332   22   23333333332100   0    000  110 1123678888888776


Q ss_pred             hc-----cCCcEEEEE
Q 013761          362 VG-----GNGRSYVLI  372 (437)
Q Consensus       362 ~~-----~~Ge~y~l~  372 (437)
                      +.     -.|+.+.+.
T Consensus       256 ~s~~~~~~tG~~i~vd  271 (276)
T 2b4q_A          256 AGTAGAYMTGNVIPID  271 (276)
T ss_dssp             HSGGGTTCCSCEEEES
T ss_pred             hCccccCCCCCEEEeC
Confidence            63     247766663

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.73  E-value=3.2e-17  Score=159.75  Aligned_cols=195  Identities=17%  Similarity=0.125  Sum_probs=123.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC----CCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML----PRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~----~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+++    ...+.++.+|++|.++++++++.     
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999999999999999999998652  112221    23358999999999999988874     


Q ss_pred             --ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 --CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 --~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                        +|+||||||+...          .+++++++|+.|++++++++      ++.|......     ..+++..+++....
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~~~~~-----~g~IV~isS~~~~~  178 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHA------FRMMKAQTPR-----GGRIINNGSISAQT  178 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHSSSC-----CEEEEEECCGGGTC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCC-----CcEEEEECCHHhCC
Confidence              4999999997532          15669999999999999998      4444322100     01455555554433


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCcc--ce-ec---c-ccCCCcccHHHHHHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGY--VE-LS---K-KLSLPLGCTLDRYEGLVLS  361 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~--~~-i~---~-~~~~p~g~v~D~~~gi~l~  361 (437)
                      ..|  ....|+.+|.+.+.+......+.+   .   .+.++.+.++...  .. ..   . ......+..+|++++++..
T Consensus       179 ~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL  256 (281)
T 4dry_A          179 PRP--NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYM  256 (281)
T ss_dssp             CCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHH
T ss_pred             CCC--CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHH
Confidence            233  356788888877766654444332   2   2333333332210  00 00   0 0011223578888888877


Q ss_pred             hccC
Q 013761          362 VGGN  365 (437)
Q Consensus       362 ~~~~  365 (437)
                      +..+
T Consensus       257 ~s~~  260 (281)
T 4dry_A          257 ASLP  260 (281)
T ss_dssp             HHSC
T ss_pred             hCCC
Confidence            7533

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=2.3e-17  Score=158.12  Aligned_cols=101  Identities=16%  Similarity=0.178  Sum_probs=84.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKI  230 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~V  230 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.+ ..+.+. . .++.+|++|.++++++++       .+|+|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6789999999999999999999999999999999987642 222222 3 789999999999998887       46999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |||||+...         .+++.+++|+.|++++++++.+
T Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  121 (256)
T 2d1y_A           82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAR  121 (256)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            999997542         1567899999999999999843

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.72  E-value=3.2e-17  Score=158.55  Aligned_cols=144  Identities=15%  Similarity=0.082  Sum_probs=102.4

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      .++.+|++|||||+||||++++++|+++|++|++++|+.+..     . ....+.+|++|.++++++++       .+|+
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-----~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-----A-ADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS-----C-CSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----H-hhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            347899999999999999999999999999999999976531     1 12445799999999888776       4699


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+....         +++.+++|+.|++++++++      ++.|.....+       +++..++.......|  .
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~iv~isS~~~~~~~~--~  162 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAA------IPLMAAAGGG-------AIVNVASCWGLRPGP--G  162 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCSBTTBCCT--T
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHhcCCc-------EEEEECCHHhCCCCC--C
Confidence            99999986421         5678999999999999999      4444322111       344444443332222  3


Q ss_pred             cchhhhhhhhcccchhhhhcc
Q 013761          301 FQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ...|+.+|.+.+.+......+
T Consensus       163 ~~~Y~asKaa~~~l~~~la~e  183 (266)
T 3uxy_A          163 HALYCLTKAALASLTQCMGMD  183 (266)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHH
Confidence            456777777766655444333

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.72  E-value=8.1e-17  Score=152.74  Aligned_cols=102  Identities=17%  Similarity=0.195  Sum_probs=85.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  ...+.+.  ..+.++.+|++|.++++++++.       +
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            678999999999999999999999999999999998652  1122222  4789999999999999998875       7


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      |+||||||....         .+++.+++|+.|++++++++.
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  125 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI  125 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence            999999997532         146789999999999988874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.72  E-value=1.4e-17  Score=161.37  Aligned_cols=147  Identities=13%  Similarity=0.043  Sum_probs=108.8

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      -+|+||++|||||++|||++++++|+++|++|++++|+.++.    . ....++++|++|+++++++++.       +|+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----L-PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----S-CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----C-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            358999999999999999999999999999999999976531    1 2334788999999999888864       499


Q ss_pred             EEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          230 IIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       230 VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      ||||||+...           .|++.+++|+.|++++++++      ++.|.....|       .+++.+++......|.
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~p~m~~~~~G-------~Iv~isS~~~~~~~~~  148 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQL------VPDMVARGSG-------VVVHVTSIQRVLPLPE  148 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTSCCTT
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhh------chhhhhcCCc-------eEEEEEehhhccCCCC
Confidence            9999996421           16779999999999999999      6666544433       4666666554332221


Q ss_pred             cccchhhhhhhhcccchhhhhccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                       ....|..+|.+...+......+.
T Consensus       149 -~~~~Y~asKaal~~lt~~lA~El  171 (261)
T 4h15_A          149 -STTAYAAAKAALSTYSKAMSKEV  171 (261)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -ccHHHHHHHHHHHHHHHHHHHHh
Confidence             23557777776665554443333

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.72  E-value=4.1e-17  Score=153.79  Aligned_cols=187  Identities=18%  Similarity=0.101  Sum_probs=119.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh----hCCCCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD----MLPRSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~----~~~~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      +|++|||||+||||++++++|+++|++|++++|+.+.  +..+    ..+..+.++.+|++|+++++++++       .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999998652  1111    235678999999999999999887       46


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||+....         +++.+++|+.|++++++++.      +.|.... +       .++..++....  .+.
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~~~~~~-~-------~ii~~sS~~~~--~~~  145 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFL------DSLKRTG-G-------LALVTTSDVSA--RLI  145 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHT-C-------EEEEECCGGGS--SCC
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHH------HHHhhcC-C-------cEEEEecchhc--ccC
Confidence            9999999985321         56789999999999999994      3331110 0       12222222211  122


Q ss_pred             cccchhhhhhhhcccchhhh-hccccc---ceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc
Q 013761          299 TYFQDVVAFKYDAGMDAKFE-LSETGD---AVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~-~~~~~~---~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~  363 (437)
                      .....|..+|.+.+.+.... ....+.   .+.++.+.++.................+|++++++..+.
T Consensus       146 ~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~~  214 (235)
T 3l77_A          146 PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLK  214 (235)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCCCGGGTCBCHHHHHHHHHHHHT
T ss_pred             CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCcccccCCCCHHHHHHHHHHHHc
Confidence            23456888888776655332 222232   233333333221100000000112357888888887774

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.72  E-value=5.5e-17  Score=153.81  Aligned_cols=102  Identities=23%  Similarity=0.289  Sum_probs=83.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      ++|++|||||+||||++++++|+++|++|++++|+.+.  +..+.    .+..+.++.+|++|+++++++++       +
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999998652  11222    23468999999999999999887       5


Q ss_pred             ccEEEEeccCCCC------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||....            .+++.+++|+.|++++++++.+
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  127 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLP  127 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            7999999997432            1456899999999999888743

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.72  E-value=3.8e-17  Score=156.06  Aligned_cols=104  Identities=21%  Similarity=0.296  Sum_probs=86.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh----CCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM----LPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~----~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |++|+||||||+||||++++++|+++|++|++++|+.+.  +..+.    ....+.++.+|++|.++++++++.      
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            678999999999999999999999999999999996542  11211    245789999999999999988875      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       +|+||||||.....         +++.+++|+.|++++++++.+.
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  137 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL  137 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHH
Confidence             69999999975321         4568999999999999998543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.72  E-value=1.2e-16  Score=152.43  Aligned_cols=99  Identities=19%  Similarity=0.240  Sum_probs=82.6

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      ++|.+|+||||||+||||++++++|+++|++|++++|+.+..      ..+..+.+|++|+++++++++.       +|+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH------HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            457889999999999999999999999999999999976521      1222488999999999988874       599


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ||||||+...         .+++.+++|+.|++++++++.+
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  125 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASR  125 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999997542         2567999999999999999843

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.72  E-value=9.8e-18  Score=154.82  Aligned_cols=185  Identities=14%  Similarity=0.053  Sum_probs=134.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|+.+.     ....+.++.+|++|.+++.+++  +|+||||||..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeec
Confidence            467999999999999999999999998  99999998653     2346888999999999888888  99999999976


Q ss_pred             C---CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--------CcchhhhhhhhhccCCCCc-ceeeccCcccchh
Q 013761          238 S---TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--------KSSKSKLLLAKFKSADSLN-GWEVRQGTYFQDV  304 (437)
Q Consensus       238 ~---~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--------~~g~sk~~~~k~v~~ssl~-~~i~rP~~~~~~y  304 (437)
                      .   ..+++.+++|+.++.++++++++.+++ +.++++.        .|+.+|...+.++...++. ++++||+.++.+.
T Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~  156 (215)
T 2a35_A           77 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR  156 (215)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTT
T ss_pred             cccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCC
Confidence            4   346778999999999999999999876 5555432        3566777788888777888 8999998665543


Q ss_pred             hhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc-cCCcEEEEE
Q 013761          305 VAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG-GNGRSYVLI  372 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~-~~Ge~y~l~  372 (437)
                      ....+    ...+  ..   ...   ...+ |    ..    ...+++|++++++.++. ..++.|++.
T Consensus       157 ~~~~~----~~~~--~~---~~~---~~~~-~----~~----~~i~~~Dva~~~~~~~~~~~~~~~~i~  204 (215)
T 2a35_A          157 EEFRL----AEIL--AA---PIA---RILP-G----KY----HGIEACDLARALWRLALEEGKGVRFVE  204 (215)
T ss_dssp             SCEEG----GGGT--TC---CCC--------C----HH----HHHHHHHHHHHHHHHHTCCCSEEEEEE
T ss_pred             CcchH----HHHH--HH---hhh---hccC-C----Cc----CcEeHHHHHHHHHHHHhcCCCCceEEc
Confidence            22100    0000  00   000   0000 0    00    12268999999999885 346778773

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.72  E-value=2.4e-17  Score=158.83  Aligned_cols=103  Identities=17%  Similarity=0.221  Sum_probs=85.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHh-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+     ...+.++.+|++|.++++++++     
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3778999999999999999999999999999999998652  111111     4578899999999999998887     


Q ss_pred             --cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 --NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                        .+|+||||||+...          .+++.+++|+.|++++++++.
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  136 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVL  136 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence              46999999997543          156789999999999888873

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.72  E-value=3.8e-17  Score=160.56  Aligned_cols=214  Identities=13%  Similarity=0.130  Sum_probs=141.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc-H-HHHhh-CCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-Q-EVVDM-LPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~-~-~~~~~-~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +++||||||||+||++|+++|+++|++|++++|+.+ . ..... ...+++++.+|++|.+++.++++++|+|||+|+..
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            468999999999999999999999999999999864 1 11111 13468999999999999999999999999999864


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcC-CceeeeecCC--------------cchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFN-NKLAQLRAGK--------------SSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~g-vkl~~l~~~~--------------~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      .          +.++.++++++++.+ ++....+.-.              ...+|..++.++...++.+++++|+.++.
T Consensus        91 ~----------~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~  160 (318)
T 2r6j_A           91 Q----------ILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFAS  160 (318)
T ss_dssp             G----------STTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEHH
T ss_pred             h----------hHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceehh
Confidence            2          456789999999998 8633332110              01445566667777789999999985543


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEccCCCCC
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILEAGPSA  379 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~~~~~~  379 (437)
                      ..... ..     . .....+    ...++..+   ....    +..+++|++++++.++..   .|+.|.+. +.+   
T Consensus       161 ~~~~~-~~-----~-~~~~~~----~~~~~~~~---~~~~----~~i~~~Dva~~~~~~l~~~~~~~~~~~~~-g~~---  218 (318)
T 2r6j_A          161 YFINY-LL-----R-PYDPKD----EITVYGTG---EAKF----AMNYEQDIGLYTIKVATDPRALNRVVIYR-PST---  218 (318)
T ss_dssp             HHHHH-HH-----C-TTCCCS----EEEEETTS---CCEE----EEECHHHHHHHHHHHTTCGGGTTEEEECC-CGG---
T ss_pred             hhhhh-hc-----c-ccCCCC----ceEEecCC---Ccee----eEeeHHHHHHHHHHHhcCccccCeEEEec-CCC---
Confidence            32111 00     0 000000    01111111   1111    123689999999988843   25545432 222   


Q ss_pred             CCCcHHHHHHHHHhhhCCc--eecccCCC
Q 013761          380 DRSQSKLYFARFSTKVGFC--RVRVPFSS  406 (437)
Q Consensus       380 ~~~s~~e~~~~i~~~~G~~--~v~iP~~~  406 (437)
                      +.+|+.|+++.+.+.+|.+  ...+|...
T Consensus       219 ~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  247 (318)
T 2r6j_A          219 NIITQLELISRWEKKIGKKFKKIHVPEEE  247 (318)
T ss_dssp             GEEEHHHHHHHHHHHHTCCCEEEEECHHH
T ss_pred             CccCHHHHHHHHHHHhCCCCceeecCHHH
Confidence            2478999999999999942  23355443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.72  E-value=3e-17  Score=156.58  Aligned_cols=103  Identities=22%  Similarity=0.244  Sum_probs=86.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+.  +..   ...+..+.++.+|++|+++++++++       .
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998652  111   1224578999999999999998886       4


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||+...         .+++.+++|+.|++++++++.+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  128 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALP  128 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            6999999997532         1567899999999999999843

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.72  E-value=6.3e-18  Score=159.38  Aligned_cols=144  Identities=17%  Similarity=0.158  Sum_probs=114.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      |++|+||||||+||||++++++|+++|+  +|++++|+.+... ......+.++.+|++|.++++++++++|+||||||.
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-EEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC-SGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc-ccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            4578999999999999999999999999  9999999865210 001136788999999999999999999999999997


Q ss_pred             CCC--chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--------CcchhhhhhhhhccCCCC-cceeeccCcccch
Q 013761          237 RST--ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--------KSSKSKLLLAKFKSADSL-NGWEVRQGTYFQD  303 (437)
Q Consensus       237 ~~~--~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--------~~g~sk~~~~k~v~~ssl-~~~i~rP~~~~~~  303 (437)
                      ...  .++.++++|+.++.++++++++.+++ +..+++.        .|+.+|...+.++...++ .+++++|+.++.+
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~  173 (242)
T 2bka_A           95 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCD  173 (242)
T ss_dssp             CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECT
T ss_pred             ccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHHHHHhcCCCCeEEEcCceecCC
Confidence            532  25678999999999999999998874 5555431        356677777777777777 4888999866554

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.72  E-value=3.9e-17  Score=158.95  Aligned_cols=148  Identities=21%  Similarity=0.166  Sum_probs=107.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +........+.++.+|++|.++++++++.       +|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            678999999999999999999999999999999998652  23344566899999999999999988874       499


Q ss_pred             EEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          230 IIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       230 VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      ||||||+...              .|++++++|+.|++++++++.+      .|....        .+++..++..... 
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~------~~~~~~--------g~iv~isS~~~~~-  147 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLP------ALVSSR--------GSVVFTISNAGFY-  147 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHT--------CEEEEECCGGGTS-
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHH------HHHhcC--------CeEEEEecchhcc-
Confidence            9999997431              1566899999999999999943      332111        1344444433222 


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                       |......|+.+|.+...+......+.
T Consensus       148 -~~~~~~~Y~asKaa~~~l~~~la~e~  173 (281)
T 3zv4_A          148 -PNGGGPLYTATKHAVVGLVRQMAFEL  173 (281)
T ss_dssp             -SSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHh
Confidence             22234567777777666654444443

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.72  E-value=4.8e-17  Score=157.92  Aligned_cols=105  Identities=23%  Similarity=0.227  Sum_probs=87.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++       
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4778999999999999999999999999999999998652  11   12224578899999999999998887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      .+|+||||||+...         .+++.+++|+.|++++++++.+.
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  144 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA  144 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhCh
Confidence            47999999997532         15678999999999999998543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.72  E-value=7.6e-17  Score=154.75  Aligned_cols=104  Identities=19%  Similarity=0.216  Sum_probs=86.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec-CCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R-~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +.+|+||||||+||||++++++|+++|++|++++| +.+.  +.   +...+.++.++.+|++|.++++++++       
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999 4331  11   22235678899999999999999887       


Q ss_pred             cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ++|+||||||.....         +++.+++|+.|++++++++.+.
T Consensus        99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  144 (274)
T 1ja9_A           99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  144 (274)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            679999999975421         4678999999999999998654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.72  E-value=8.3e-17  Score=153.71  Aligned_cols=103  Identities=16%  Similarity=0.213  Sum_probs=85.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec-CCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR-KADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R-~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +.+|+||||||+||||++++++|+++|++|++++| +.+.  +.   +......+.++.+|++|.++++++++       
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999 5431  11   12234578899999999999998887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      .+|+||||||....         .+++.+++|+.|++++++++.+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  129 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK  129 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            57999999997542         1456899999999999998854

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.71  E-value=3.9e-17  Score=160.53  Aligned_cols=207  Identities=12%  Similarity=0.077  Sum_probs=137.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC-c---HHH---Hhh-CCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA-D---QEV---VDM-LPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~-~---~~~---~~~-~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +|+|+||||||+||++|+++|+++|++|++++|+. +   ...   +.. ...++.++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            56899999999999999999999999999999986 2   111   111 134689999999999999999999999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHHHHHHhcC-CceeeeecC---------------CcchhhhhhhhhccCCCCcceeec
Q 013761          233 CATARSTITGDLFRVDYQGVYNVTKAFQDFN-NKLAQLRAG---------------KSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       233 ~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~g-vkl~~l~~~---------------~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      +|+...          +.++.++++++++.+ ++....+.-               .| .+|..++.++...++.+++++
T Consensus        84 ~a~~~~----------~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr  152 (321)
T 3c1o_A           84 ALPFPM----------ISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEAAALPYTYVS  152 (321)
T ss_dssp             CCCGGG----------SGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHHHTCCBEEEE
T ss_pred             CCCccc----------hhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHH-HHHHHHHHHHHHcCCCeEEEE
Confidence            998642          456789999999998 863222211               12 345666667767788899999


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLIL  373 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l  373 (437)
                      |+.++..... .+..  ... .....+ .   ...+..+   ...    .+..+++|++++++.++..   .|+.|.+..
T Consensus       153 p~~~~~~~~~-~~~~--~~~-~~~~~~-~---~~~~~~~---~~~----~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g  217 (321)
T 3c1o_A          153 ANCFGAYFVN-YLLH--PSP-HPNRND-D---IVIYGTG---ETK----FVLNYEEDIAKYTIKVACDPRCCNRIVIYRP  217 (321)
T ss_dssp             CCEEHHHHHH-HHHC--CCS-SCCTTS-C---EEEETTS---CCE----EEEECHHHHHHHHHHHHHCGGGTTEEEECCC
T ss_pred             eceecccccc-cccc--ccc-cccccC-c---eEEecCC---Ccc----eeEeeHHHHHHHHHHHHhCccccCeEEEEeC
Confidence            9865543221 1100  000 000000 0   0111111   111    1123689999999988842   356564422


Q ss_pred             cCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          374 EAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       374 ~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                       .+   +.+|+.|+++.+.+.+|.
T Consensus       218 -~~---~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          218 -PK---NIISQNELISLWEAKSGL  237 (321)
T ss_dssp             -GG---GEEEHHHHHHHHHHHHTS
T ss_pred             -CC---CcccHHHHHHHHHHHcCC
Confidence             11   247899999999999993

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.71  E-value=8.8e-17  Score=154.82  Aligned_cols=201  Identities=15%  Similarity=0.098  Sum_probs=124.5

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      +++++|+||||||+||||++++++|+++|++|++++++...   +.   +......+.++.+|++|.++++++++     
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34788999999999999999999999999999887654431   11   22235678999999999999999887     


Q ss_pred             --cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeee-cCCcchhhhhhhhhccCCCCcce
Q 013761          226 --NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLR-AGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~-~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                        .+|+||||||+....         +++.+++|+.|++++++++.      +.+. ....+       +++..++....
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~~~~~~~~g-------~iv~isS~~~~  168 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCI------MPMIGARQGG-------RIITLSSVSGV  168 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHTSCE-------EEEEECCHHHH
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH------HHHHhcCCCc-------EEEEEcchHhc
Confidence              469999999986421         56789999999999999873      2221 11111       23333333222


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc--e----ecccc-CCCcccHHHHHHHHHH
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV--E----LSKKL-SLPLGCTLDRYEGLVL  360 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~--~----i~~~~-~~p~g~v~D~~~gi~l  360 (437)
                      ...|  ....|+.+|.+...+......+.   +.   .+.++.+.++....  .    ..... ....+..+|++++++.
T Consensus       169 ~~~~--~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~  246 (267)
T 4iiu_A          169 MGNR--GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASY  246 (267)
T ss_dssp             HCCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             cCCC--CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            2222  34567777776665554333333   22   22333333322100  0    00001 1112367899988887


Q ss_pred             Hhc-----cCCcEEEEE
Q 013761          361 SVG-----GNGRSYVLI  372 (437)
Q Consensus       361 ~~~-----~~Ge~y~l~  372 (437)
                      .+.     -.|+.+.+.
T Consensus       247 L~s~~~~~itG~~i~vd  263 (267)
T 4iiu_A          247 LMSDIAGYVTRQVISIN  263 (267)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCCcccCccCCEEEeC
Confidence            663     247777664

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.71  E-value=3.6e-17  Score=159.46  Aligned_cols=217  Identities=17%  Similarity=0.142  Sum_probs=139.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc----HHH---Hhh-CCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD----QEV---VDM-LPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~----~~~---~~~-~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +|+|+||||||+||++|++.|+++|++|++++|+..    .+.   +.. ...++.++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            578999999999999999999999999999999853    111   111 145789999999999999999999999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHHHHHHhcC-CceeeeecCC--------------cchhhhhhhhhccCCCCcceeecc
Q 013761          233 CATARSTITGDLFRVDYQGVYNVTKAFQDFN-NKLAQLRAGK--------------SSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       233 ~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~g-vkl~~l~~~~--------------~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+...          +.++.++++++++++ ++....+.-.              ...+|..++.++...++++++++|
T Consensus        84 ~a~~~~----------~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~  153 (308)
T 1qyc_A           84 TVGSLQ----------IESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSS  153 (308)
T ss_dssp             CCCGGG----------SGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEEC
T ss_pred             CCcchh----------hhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            998642          446688999999998 8733332110              013455666677667888888999


Q ss_pred             CcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc---CCcEEEEEcc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG---NGRSYVLILE  374 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~---~Ge~y~l~l~  374 (437)
                      +.++..... ...  .... .....+    ...+.+.   ....    .+..+++|++++++.++..   .|+.|.+.. 
T Consensus       154 ~~~~~~~~~-~~~--~~~~-~~~~~~----~~~~~~~---~~~~----~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g-  217 (308)
T 1qyc_A          154 NCFAGYFLR-SLA--QAGL-TAPPRD----KVVILGD---GNAR----VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRL-  217 (308)
T ss_dssp             CEEHHHHTT-TTT--CTTC-SSCCSS----EEEEETT---SCCE----EEEECHHHHHHHHHTTSSCGGGTTEEEECCC-
T ss_pred             ceecccccc-ccc--cccc-cCCCCC----ceEEecC---CCce----EEEecHHHHHHHHHHHHhCccccCeEEEEeC-
Confidence            855432211 000  0000 000000    0011111   1111    1123689999999988743   355554422 


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhCCc--eecccCCC
Q 013761          375 AGPSADRSQSKLYFARFSTKVGFC--RVRVPFSS  406 (437)
Q Consensus       375 ~~~~~~~~s~~e~~~~i~~~~G~~--~v~iP~~~  406 (437)
                      .+   +.+|+.|+++.+.+.+|.+  ...+|...
T Consensus       218 ~~---~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  248 (308)
T 1qyc_A          218 PA---NTLSLNELVALWEKKIDKTLEKAYVPEEE  248 (308)
T ss_dssp             GG---GEEEHHHHHHHHHHHTTSCCEEEEECHHH
T ss_pred             CC---CccCHHHHHHHHHHHhCCCCceEeCCHHH
Confidence            21   2478999999999999942  23355433

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.71  E-value=6.1e-17  Score=155.23  Aligned_cols=102  Identities=16%  Similarity=0.135  Sum_probs=84.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh--------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE--------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~--------  225 (437)
                      +.+|+||||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++        
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999999999999999998652  11   12234578899999999999988884        


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      .+|+||||||+...         .+++.+++|+.|++++++++.
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~  135 (266)
T 1xq1_A           92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH  135 (266)
T ss_dssp             CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            57999999997532         156689999999999999983

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.71  E-value=9.4e-18  Score=176.31  Aligned_cols=225  Identities=14%  Similarity=0.081  Sum_probs=147.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-H----------------HhhCCCCeEEEEecCCCHHHHHH
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-V----------------VDMLPRSVEIVLGDVGDPCTLKA  222 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~----------------~~~~~~~v~~v~~Dltd~~~v~~  222 (437)
                      .+|+|||||||||||++|+++|++.|++|++++|+.... .                ......++.++.+|++|++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            457999999999999999999999999999999987621 0                1112468999999999988777 


Q ss_pred             HHhcccEEEEeccCCCC--chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhh--hhhhhccCCCCcceeeccC
Q 013761          223 AVENCNKIIYCATARST--ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKL--LLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       223 a~~~~D~VIh~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~--~~~k~v~~ssl~~~i~rP~  298 (437)
                      ++.++|+||||||....  .+..++++|+.|+.++++++.+.+.++.++++...|....  .....+.+....    .+.
T Consensus       228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~----~~~  303 (508)
T 4f6l_B          228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVY----KGQ  303 (508)
T ss_dssp             CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTTCSC----SSB
T ss_pred             CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCccccccccc----ccc
Confidence            77789999999997642  3567899999999999999998555566666432210000  000122222211    112


Q ss_pred             cccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce---------------ec----cccCCC---------ccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE---------------LS----KKLSLP---------LGC  350 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~---------------i~----~~~~~p---------~g~  350 (437)
                      .+...|+.+|+.++....... +.+..+...|+...+|...               ..    ....+|         ..+
T Consensus       304 ~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~  382 (508)
T 4f6l_B          304 LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSF  382 (508)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEE
T ss_pred             cCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEc
Confidence            245778888888877765433 3455555555544443211               00    000011         127


Q ss_pred             HHHHHHHHHHHhcc--CCcEEEEEccCCCCCCCCcHHHHHHHHHhhh
Q 013761          351 TLDRYEGLVLSVGG--NGRSYVLILEAGPSADRSQSKLYFARFSTKV  395 (437)
Q Consensus       351 v~D~~~gi~l~~~~--~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~  395 (437)
                      ++|++++++.++..  .|+.|++  .++.   .+++.|+++.+.+..
T Consensus       383 v~DvA~ai~~~~~~~~~~~~~nl--~~~~---~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          383 VDTTARQIVALAQVNTPQIIYHV--LSPN---KMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHHHHHHHHHHTTBCCSCSEEEE--SCSC---EEEHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEe--CCCC---CCCHHHHHHHHHHcC
Confidence            99999999998843  5777866  3332   478999999998754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.71  E-value=1.2e-16  Score=154.25  Aligned_cols=203  Identities=16%  Similarity=0.116  Sum_probs=126.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      ..+|+||||||+||||++++++|+++|++|+++ .|+.+.  .   ........+.++.+|++|.++++++++       
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999887 444331  1   122335678999999999999998887       


Q ss_pred             cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          226 NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      .+|+||||||+...          .+++.+++|+.|++++++++.+      .|.....+    ...+++..++......
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~~~----~~g~iv~isS~~~~~~  173 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR------RMSRLYSG----QGGAIVNVSSMAAILG  173 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHCGGGTC----CCEEEEEECCTHHHHC
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH------HHHHhccC----CCCEEEEEcchHhccC
Confidence            45999999997542          1467899999999999999944      33221000    0013444444433222


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc----eec----ccc-CCCcccHHHHHHHHHH
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV----ELS----KKL-SLPLGCTLDRYEGLVL  360 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~----~i~----~~~-~~p~g~v~D~~~gi~l  360 (437)
                      .+. ....|+.+|.+.+.+......++   +.   .+.++.+.++....    ...    ... ....+..+|++++++.
T Consensus       174 ~~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          174 SAT-QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILY  252 (272)
T ss_dssp             CTT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHH
T ss_pred             CCC-CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHH
Confidence            221 23568888887776654444433   22   23333333332100    000    000 1112358899999888


Q ss_pred             Hhc-----cCCcEEEEE
Q 013761          361 SVG-----GNGRSYVLI  372 (437)
Q Consensus       361 ~~~-----~~Ge~y~l~  372 (437)
                      .+.     -.|+.+.+.
T Consensus       253 l~s~~~~~~tG~~i~vd  269 (272)
T 4e3z_A          253 LLSPSASYVTGSILNVS  269 (272)
T ss_dssp             HHSGGGTTCCSCEEEES
T ss_pred             HhCCccccccCCEEeec
Confidence            773     247777764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.71  E-value=1.7e-16  Score=151.76  Aligned_cols=195  Identities=12%  Similarity=0.065  Sum_probs=126.5

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc-------cE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC-------NK  229 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~-------D~  229 (437)
                      ...++|+||||||+||||++++++|+++|++|++++|+.+..       ....+.+|++|.++++++++.+       |+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            346789999999999999999999999999999999987531       1245789999999999988754       99


Q ss_pred             EEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ||||||+...          .+++.+++|+.|++++++++.+      .|...         .+++..++.....  |..
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~---------g~iv~isS~~~~~--~~~  153 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAK------LLNQG---------GLFVLTGASAALN--RTS  153 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH------HEEEE---------EEEEEECCGGGGS--CCT
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHH------hhccC---------CEEEEEechhhcc--CCC
Confidence            9999997421          1466899999999999999944      33221         1355555443332  222


Q ss_pred             ccchhhhhhhhcccchhhhhcccc-----cc---eeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc------C
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETG-----DA---VFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG------N  365 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~-----~~---v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~------~  365 (437)
                      ....|+.+|.+.+.+......+++     ..   +.++.+.++.................+|++++++..+..      .
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~t  233 (251)
T 3orf_A          154 GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTN  233 (251)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccccccccCCHHHHHHHHHHHhcCccccCCc
Confidence            356788888887777655555532     22   222222221100000000001123578999999887744      4


Q ss_pred             CcEEEEEccC
Q 013761          366 GRSYVLILEA  375 (437)
Q Consensus       366 Ge~y~l~l~~  375 (437)
                      |+.+.+..+.
T Consensus       234 G~~i~v~~g~  243 (251)
T 3orf_A          234 GSLVKFETKS  243 (251)
T ss_dssp             TCEEEEEEET
T ss_pred             ceEEEEecCC
Confidence            7777775443

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.71  E-value=6.1e-17  Score=157.17  Aligned_cols=104  Identities=21%  Similarity=0.271  Sum_probs=86.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCC---CeEEEEecCCCHHHHHHHHh----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPR---SVEIVLGDVGDPCTLKAAVE----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~---~v~~v~~Dltd~~~v~~a~~----  225 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.   ...   .+.++.+|++|+++++++++    
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998652  11121   223   68999999999999998887    


Q ss_pred             ---cccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 ---NCNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                         .+|+||||||+...             .+++.+++|+.|++++++++.+
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  134 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKP  134 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence               46999999997532             1566899999999999999854

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.71  E-value=1.1e-16  Score=153.71  Aligned_cols=98  Identities=20%  Similarity=0.262  Sum_probs=83.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      ++++|+||||||+||||++++++|+++|++|++++|+.+.      ...+.++.+|++|+++++++++.       +|+|
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP------PEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC------CTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh------hccceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999997642      11378899999999999988875       4999


Q ss_pred             EEeccCCC---------CchhhHHHHHHHHHHHHHHHHHh
Q 013761          231 IYCATARS---------TITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       231 Ih~Ag~~~---------~~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |||||+..         ..+++.+++|+.|++++++++.+
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  131 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANR  131 (253)
T ss_dssp             EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999743         23677999999999999998843

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.71  E-value=4.6e-17  Score=155.85  Aligned_cols=101  Identities=24%  Similarity=0.301  Sum_probs=84.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      +|++|||||+||||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++       .+|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999999999998652  11   12224578899999999999999887       579


Q ss_pred             EEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||+...         .+++.+++|+.|++++++++.+
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  123 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE  123 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99999997532         1567899999999999998844

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.71  E-value=5.7e-17  Score=155.70  Aligned_cols=202  Identities=16%  Similarity=0.083  Sum_probs=131.7

Q ss_pred             CCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcH---HHHh----hCCCCeEEEEecCCCHHHHHHHHhc--
Q 013761          158 GAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQ---EVVD----MLPRSVEIVLGDVGDPCTLKAAVEN--  226 (437)
Q Consensus       158 ~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~----~~~~~v~~v~~Dltd~~~v~~a~~~--  226 (437)
                      ++.+|++|||||+  +|||++++++|+++|++|++++|+...   +..+    ..+.++.++.+|++|.++++++++.  
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            3788999999999  999999999999999999999987642   1122    2256789999999999999988875  


Q ss_pred             -----ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          227 -----CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       227 -----~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                           +|+||||||+....         +++.+++|+.|++++++++      ++.|.....+       +++..++...
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~~~g-------~iv~isS~~~  163 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAV------GHHFKERGTG-------SLVITASMSG  163 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCC-------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHH------HHHHHHcCCc-------eEEEEccccc
Confidence                 49999999975421         5678999999999999998      3333321111       3444444333


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhcccccc-----eeeeeeeccCccce---e----ccc-cCCCcccHHHHHHHHH
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSETGDA-----VFSGYVFTRGGYVE---L----SKK-LSLPLGCTLDRYEGLV  359 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~-----v~~g~~~~~~G~~~---i----~~~-~~~p~g~v~D~~~gi~  359 (437)
                      ....+......|+.+|.+.+.+......+++..     +.++.+.++.....   .    ... .....+..+|++++++
T Consensus       164 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~  243 (267)
T 3gdg_A          164 HIANFPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYV  243 (267)
T ss_dssp             TSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHH
T ss_pred             cccCCCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhh
Confidence            222211235678899888777665555444332     33333333221000   0    000 0111235788888887


Q ss_pred             HHhc-----cCCcEEEEE
Q 013761          360 LSVG-----GNGRSYVLI  372 (437)
Q Consensus       360 l~~~-----~~Ge~y~l~  372 (437)
                      ..+.     -.|+.+.+.
T Consensus       244 ~l~s~~~~~itG~~i~vd  261 (267)
T 3gdg_A          244 YFASDASTYTTGADLLID  261 (267)
T ss_dssp             HHHSTTCTTCCSCEEEES
T ss_pred             eeecCccccccCCEEEEC
Confidence            7663     247777663

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.71  E-value=1.3e-16  Score=155.23  Aligned_cols=105  Identities=19%  Similarity=0.264  Sum_probs=86.3

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh------
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      ..+.+|+||||||+||||+++++.|+++|++|++++|+.+.  +.   +......+.++.+|++|.++++++++      
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            34778999999999999999999999999999999887542  11   22224578899999999999999886      


Q ss_pred             -cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 -NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                       .+|+||||||+...         .+++.+++|+.|++++++++.+
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISK  165 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence             46999999997532         1567899999999999998843

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.71  E-value=3.4e-17  Score=162.49  Aligned_cols=105  Identities=21%  Similarity=0.183  Sum_probs=87.0

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCC--CeEEEEecCCCHHHHHHHHhc---
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPR--SVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~--~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      .++.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+.   ...  .+.++.+|++|.++++++++.   
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            34788999999999999999999999999999999998752  11111   122  789999999999999998874   


Q ss_pred             ----ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 ----CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                          +|+||||||+...         .+++++++|+.|++++++++.+
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  131 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVP  131 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                4999999997532         1567899999999999999844

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.71  E-value=1.1e-16  Score=148.27  Aligned_cols=101  Identities=17%  Similarity=0.216  Sum_probs=84.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCch
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTIT  241 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~  241 (437)
                      |+||||||||+||++|+++|+++|++|++++|+.+..  ..+...+.++.+|++|.++  +++.++|+||||||....  
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI--TQTHKDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH--HHHCSSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT--
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh--hhccCCCeEEeccccChhh--hhhcCCCEEEECCcCCcc--
Confidence            4799999999999999999999999999999987632  1122678999999999988  888999999999998432  


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCc-eeeee
Q 013761          242 GDLFRVDYQGVYNVTKAFQDFNNK-LAQLR  270 (437)
Q Consensus       242 ~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~  270 (437)
                        ...+|+.++.++++++++.+++ +.+++
T Consensus        75 --~~~~~~~~~~~l~~a~~~~~~~~~v~~S  102 (221)
T 3ew7_A           75 --EAEKHVTSLDHLISVLNGTVSPRLLVVG  102 (221)
T ss_dssp             --TTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred             --ccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence              3556999999999999998654 54444

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=8.9e-17  Score=155.36  Aligned_cols=193  Identities=16%  Similarity=0.091  Sum_probs=123.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      ++.+|+||||||+||||++++++|+++|++|++++|+.+.  +.   +.....++.++.+|++|.++++++++       
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            4788999999999999999999999999999999998652  11   22234578999999999999998887       


Q ss_pred             cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          226 NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      .+|+||||||+....         +++.+++|+.|++++++++.+      .|.....+       +++..++.......
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~~~-------~iv~isS~~~~~~~  174 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLP------AMTKNNHG-------HIVTVASAAGHVSV  174 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHH------HHHHTTCE-------EEEEECCCC-CCCH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHhcCCC-------EEEEEechhhcCCC
Confidence            569999999975421         456899999999999998843      33211111       34444433322111


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc------cccee---eeeeeccCccceeccccCCCcccHHHHHHHHHHHhccCCc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET------GDAVF---SGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGR  367 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~------~~~v~---~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~Ge  367 (437)
                      |  ....|+.+|.+.+.+......+.      +..+.   ++.+.++..  ........+....+|++++++..+..+..
T Consensus       175 ~--~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          175 P--FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI--KNPSTSLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             H--HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST--TCTHHHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             C--CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcc--ccccccccCCCCHHHHHHHHHHHHHcCCC
Confidence            1  24557777777665554433332      22221   222222110  00000001223578999999888865433

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.70  E-value=1.7e-16  Score=155.71  Aligned_cols=200  Identities=10%  Similarity=0.004  Sum_probs=131.9

Q ss_pred             CCCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCcH-HHHhh---CCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKADQ-EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +|.+|++|||||+|  |||++++++|+++|++|++++|+.+. +....   ....+.++.+|++|.++++++++.     
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999997  99999999999999999999998642 11111   123468899999999999998874     


Q ss_pred             --ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 --CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 --~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                        +|+||||||+...             .+++.+++|+.|++++++++.      +.|..  .+       +++..++..
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~------~~m~~--~g-------~IV~isS~~  171 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAE------PLMTN--GG-------SILTLSYYG  171 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG------GGCTT--CE-------EEEEEECGG
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHH------HHhhc--CC-------EEEEEEehh
Confidence              5999999998642             156789999999999999994      44332  11       344444443


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc--e---ec----cc-cCCCcccHHHHH
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV--E---LS----KK-LSLPLGCTLDRY  355 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~--~---i~----~~-~~~p~g~v~D~~  355 (437)
                      .....|  ....|+.+|.+...+......+++   .   .+.++.+.++....  .   ..    .. .....+..+|++
T Consensus       172 ~~~~~~--~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA  249 (296)
T 3k31_A          172 AEKVVP--HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVG  249 (296)
T ss_dssp             GTSCCT--TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred             hccCCC--CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHH
Confidence            332223  356788888877766654444432   2   33444444432100  0   00    00 011123678999


Q ss_pred             HHHHHHhc-----cCCcEEEEEcc
Q 013761          356 EGLVLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       356 ~gi~l~~~-----~~Ge~y~l~l~  374 (437)
                      ++++..+.     -.|+.+.+.++
T Consensus       250 ~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          250 GAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHcCCccCCccCCEEEECCC
Confidence            88887763     34787777443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=8.8e-17  Score=151.64  Aligned_cols=103  Identities=17%  Similarity=0.184  Sum_probs=86.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH-HHHhhC-CCCeEEEEecCCCHHHHHHHHh---------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ-EVVDML-PRSVEIVLGDVGDPCTLKAAVE---------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~-~~~~~~-~~~v~~v~~Dltd~~~v~~a~~---------  225 (437)
                      |++|+||||||+||||++++++|+++|  ++|++++|+.+. +.+..+ ...+.++.+|++|.++++++++         
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999  999999998653 223333 4578999999999999998887         


Q ss_pred             cccEEEEeccCCC-C---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 NCNKIIYCATARS-T---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ~~D~VIh~Ag~~~-~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      .+|+||||||... .         .+++.+++|+.|++++++++.+
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  126 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLP  126 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            7899999999765 1         1466899999999999998844

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.70  E-value=4.9e-17  Score=155.84  Aligned_cols=101  Identities=17%  Similarity=0.248  Sum_probs=84.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H--HH---hhCCCCeEEEEecCCCHHHHHHHHh-------c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E--VV---DMLPRSVEIVLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~--~~---~~~~~~v~~v~~Dltd~~~v~~a~~-------~  226 (437)
                      +|++|||||+||||++++++|+++|++|++++|+.+.  .  ..   ......+.++.+|++|+++++++++       .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999998653  1  11   1224578999999999999998887       5


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|+||||||+...         .+++.+++|+.|++++++++.+
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  125 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASR  125 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            7999999997532         1567899999999999999854

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.70  E-value=4e-17  Score=172.20  Aligned_cols=242  Identities=12%  Similarity=0.000  Sum_probs=137.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC-
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST-  239 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~-  239 (437)
                      +|+||||||||+||++|++.|+++|++|++++|+....         ..+.+|+.|.  +.++++++|+|||+||.... 
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~  215 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------GKRFWDPLNP--ASDLLDGADVLVHLAGEPIFG  215 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------TCEECCTTSC--CTTTTTTCSEEEECCCC----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------cceeecccch--hHHhcCCCCEEEECCCCcccc
Confidence            67999999999999999999999999999999986531         1256788753  45677899999999997532 


Q ss_pred             -----chhhHHHHHHHHHHHHHHH-HHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          240 -----ITGDLFRVDYQGVYNVTKA-FQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       240 -----~~~~~~~vNv~gt~~l~~a-a~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                           .+..++++|+.|+.+++++ ++..+++ +.++++. .|+...  ....+.++..       . +.+.|+..+...
T Consensus       216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~--~~~~~~E~~~-------~-~~~~y~~~~~~~  285 (516)
T 3oh8_A          216 RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDR--GDEILTEESE-------S-GDDFLAEVCRDW  285 (516)
T ss_dssp             -CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEE--EEEEECTTSC-------C-CSSHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCC--CCCccCCCCC-------C-CcChHHHHHHHH
Confidence                 2456899999999999999 6666764 5555532 222000  0011122111       0 123344444433


Q ss_pred             ccchhhhhcccccceeeeeeeccCccce-----e----cc--ccC-------CCcccHHHHHHHHHHHhcc--CCcEEEE
Q 013761          312 GMDAKFELSETGDAVFSGYVFTRGGYVE-----L----SK--KLS-------LPLGCTLDRYEGLVLSVGG--NGRSYVL  371 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~~~~~G~~~-----i----~~--~~~-------~p~g~v~D~~~gi~l~~~~--~Ge~y~l  371 (437)
                      +.... .....+..+...++...||...     +    ..  ...       ....|++|++++++.++..  .++.|++
T Consensus       286 E~~~~-~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni  364 (516)
T 3oh8_A          286 EHATA-PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINA  364 (516)
T ss_dssp             HHTTH-HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred             HHHHH-HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEE
Confidence            33221 2223344444444433333110     0    00  000       1123899999999998853  3455654


Q ss_pred             EccCCCCCCCCcHHHHHHHHHhhhCCce-ecccCCCcccC--CC-------CCCCCCHHHHhhcccee
Q 013761          372 ILEAGPSADRSQSKLYFARFSTKVGFCR-VRVPFSSFRPV--KP-------DDPPMDPFLVHTMTIRF  429 (437)
Q Consensus       372 ~l~~~~~~~~~s~~e~~~~i~~~~G~~~-v~iP~~~~r~~--~~-------~~~~ld~~ki~~~gi~f  429 (437)
                        .++.   .+++.|+++.+.+.+|.+. +.+|....+..  ..       ....+++.|++.+|+.|
T Consensus       365 --~~~~---~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~  427 (516)
T 3oh8_A          365 --VAPN---PVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTF  427 (516)
T ss_dssp             --SCSC---CEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCC
T ss_pred             --ECCC---CCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCC
Confidence              4443   5789999999999988432 33554433321  11       12356788888765444

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.70  E-value=3.2e-16  Score=152.33  Aligned_cols=104  Identities=20%  Similarity=0.212  Sum_probs=87.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.   ..   +.....++.++.+|++|.++++++++       
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999998642   11   22335578999999999999988876       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      .+|+||||||+...         .+++.+++|+.|++++++++.+.
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  152 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH  152 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            46999999997532         15678999999999999999664

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.70  E-value=1.1e-16  Score=154.71  Aligned_cols=201  Identities=15%  Similarity=0.144  Sum_probs=124.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      +.+|+||||||+||||++++++|+++|++|++++|+.+.  ...   ......+.++.+|++|.++++++++.       
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999999999999999998652  111   12245789999999999999998876       


Q ss_pred             ccEEEEeccCCCC------c-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 CNKIIYCATARST------I-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 ~D~VIh~Ag~~~~------~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      +|+||||||+...      .     +++.+++|+.|++++++++.+      .+.....       .+++..++......
T Consensus       112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~------~~~~~~~-------~~iv~isS~~~~~~  178 (279)
T 3ctm_A          112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGK------IFKKNGK-------GSLIITSSISGKIV  178 (279)
T ss_dssp             CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHTC-------CEEEEECCCTTSCC
T ss_pred             CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHH------HHHhcCC-------CeEEEECchHhccC
Confidence            7999999997533      1     456899999998877776622      2211100       12333333322211


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc-----cceeeeeeeccCcc-c--eec----cccC-CCcccHHHHHHHHHHHh
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG-----DAVFSGYVFTRGGY-V--ELS----KKLS-LPLGCTLDRYEGLVLSV  362 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~-----~~v~~g~~~~~~G~-~--~i~----~~~~-~p~g~v~D~~~gi~l~~  362 (437)
                      .+......|+.+|.+.+.+......+++     ..+.++.+.++... .  ...    .... ...++.+|+++.++..+
T Consensus       179 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  258 (279)
T 3ctm_A          179 NIPQLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLA  258 (279)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHh
Confidence            1122345688888877766654444432     12333333332110 0  000    0000 11235778888887766


Q ss_pred             c-----cCCcEEEEE
Q 013761          363 G-----GNGRSYVLI  372 (437)
Q Consensus       363 ~-----~~Ge~y~l~  372 (437)
                      .     -.|+.+.+.
T Consensus       259 s~~~~~~tG~~i~vd  273 (279)
T 3ctm_A          259 SNASTFTTGSDVVID  273 (279)
T ss_dssp             SGGGTTCCSCEEEES
T ss_pred             CccccCccCCEEEEC
Confidence            3     246666663

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.70  E-value=9e-17  Score=151.79  Aligned_cols=101  Identities=22%  Similarity=0.300  Sum_probs=82.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------cc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------NC  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~  227 (437)
                      +|+||||||+||||++++++|+++|++|+++ +|+.+.  ..   +......+.++.+|++|.++++++++       .+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999995 676542  11   11224578899999999999999887       47


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |+||||||....         .+++.+++|+.|++++++++.+
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  123 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK  123 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            999999997542         1566899999999999999855

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.70  E-value=5.8e-17  Score=155.80  Aligned_cols=104  Identities=16%  Similarity=0.173  Sum_probs=86.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..   ...+..+.++.+|++|+++++++++       
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999998652  111   2224578899999999999988887       


Q ss_pred             cccEEEEeccCC-CC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 NCNKIIYCATAR-ST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ~~D~VIh~Ag~~-~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      .+|+||||||+. ..         .|++.+++|+.|++++++++.+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  129 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR  129 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            569999999975 21         1567899999999999999844

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.70  E-value=4.4e-17  Score=155.77  Aligned_cols=141  Identities=19%  Similarity=0.141  Sum_probs=101.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKIIY  232 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VIh  232 (437)
                      |++|||||+||||++++++|+++|++|++++|+.+.  +..+++...+.++.+|++|+++++++++       .+|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            589999999999999999999999999999998652  2233344578999999999999999987       4699999


Q ss_pred             eccCCC--C--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          233 CATARS--T--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       233 ~Ag~~~--~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      |||+..  .        .+++.+++|+.|++++++++.      +.|.....+       +++..++.......|  ...
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~m~~~~~g-------~iv~isS~~~~~~~~--~~~  145 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL------PGMVERNHG-------HIINIGSTAGSWPYA--GGN  145 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHTCC-------EEEEECCGGGTSCCT--TCH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHH------HHHHhcCCc-------eEEEEccchhccCCC--CCc
Confidence            999752  1        156789999999999999984      333221111       344444433222122  245


Q ss_pred             hhhhhhhhcccchhh
Q 013761          303 DVVAFKYDAGMDAKF  317 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~  317 (437)
                      .|+.+|.+.+.+...
T Consensus       146 ~Y~asKaa~~~~~~~  160 (248)
T 3asu_A          146 VYGATKAFVRQFSLN  160 (248)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH
Confidence            677777766655543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=1.3e-16  Score=156.63  Aligned_cols=103  Identities=18%  Similarity=0.307  Sum_probs=85.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCCC---CeEEEEecCCCHHHHHHHHh-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLPR---SVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~~---~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+   ....   .+.++.+|++|+++++++++     
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999998652  1111   2233   68899999999999998887     


Q ss_pred             --cccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 --NCNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        .+|+||||||+...           .+++.+++|+.|++++++++.+
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  152 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE  152 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence              57999999997432           1566899999999999999854

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.70  E-value=1e-17  Score=168.41  Aligned_cols=200  Identities=11%  Similarity=0.034  Sum_probs=135.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      |+||||||||+||++|+++|+++|+ +|++++|+                    +|.++++++++++|+|||+||.....
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~~   60 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRPE   60 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCCC
Confidence            5899999999999999999999998 88777663                    67889999999999999999976543


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHhcCCc--eeeeec------CCcchhhhhhhhhccC----CCCcceeeccCcccchhhhh
Q 013761          241 -TGDLFRVDYQGVYNVTKAFQDFNNK--LAQLRA------GKSSKSKLLLAKFKSA----DSLNGWEVRQGTYFQDVVAF  307 (437)
Q Consensus       241 -~~~~~~vNv~gt~~l~~aa~~~gvk--l~~l~~------~~~g~sk~~~~k~v~~----ssl~~~i~rP~~~~~~y~~s  307 (437)
                       +...+++|+.++.++++++++.+++  +.++++      ..|+.+|...|.++..    .+++++++||+.++.+....
T Consensus        61 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~  140 (369)
T 3st7_A           61 HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKP  140 (369)
T ss_dssp             CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCC
Confidence             5668889999999999999999865  555553      2356677776666543    57788888887665543321


Q ss_pred             hhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhccC----CcEEEEEccCCCCCCCCc
Q 013761          308 KYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGN----GRSYVLILEAGPSADRSQ  383 (437)
Q Consensus       308 k~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~----Ge~y~l~l~~~~~~~~~s  383 (437)
                      .+..-..........+..+.   +..  +  ...    ....+++|++++++.++..+    |+.|++  .++.   .++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~---~~~--~--~~~----~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i--~~~~---~~s  204 (369)
T 3st7_A          141 NYNSVIATFCYKIARNEEIQ---VND--R--NVE----LTLNYVDDIVAEIKRAIEGTPTIENGVPTV--PNVF---KVT  204 (369)
T ss_dssp             TSSCHHHHHHHHHHTTCCCC---CSC--T--TCE----EEEEEHHHHHHHHHHHHHTCCCEETTEECC--SCCE---EEE
T ss_pred             CcchHHHHHHHHHHcCCCeE---ecC--C--CeE----EEEEEHHHHHHHHHHHHhCCcccCCceEEe--CCCC---cee
Confidence            11000000000001111100   000  0  001    11237999999999988432    566655  4432   578


Q ss_pred             HHHHHHHHHhhhCC
Q 013761          384 SKLYFARFSTKVGF  397 (437)
Q Consensus       384 ~~e~~~~i~~~~G~  397 (437)
                      +.|+++.+.+..|.
T Consensus       205 ~~e~~~~~~~~~g~  218 (369)
T 3st7_A          205 LGEIVDLLYKFKQS  218 (369)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999883

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.69  E-value=2.3e-16  Score=149.97  Aligned_cols=139  Identities=12%  Similarity=0.105  Sum_probs=101.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLML-RGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh  232 (437)
                      .++|++|||||+||||++++++|++ .|++|++++|+.+.     ....+.++.+|++|.++++++++     .+|+|||
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~   76 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----SAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFL   76 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----CCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----ccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence            3578999999999999999999999 78999999987652     12367899999999999999987     5699999


Q ss_pred             eccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          233 CATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       233 ~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      |||+...         .+++.+++|+.|++++++++      ++.|...  +       +++..++.......|  ....
T Consensus        77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~~~~~~~--g-------~iv~~sS~~~~~~~~--~~~~  139 (244)
T 4e4y_A           77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGL------ENNLKVG--A-------SIVFNGSDQCFIAKP--NSFA  139 (244)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHT------GGGEEEE--E-------EEEEECCGGGTCCCT--TBHH
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH------HHHhccC--c-------EEEEECCHHHccCCC--CCch
Confidence            9998532         15678999999999999999      4444321  1       244444433322222  2456


Q ss_pred             hhhhhhhcccchhhhh
Q 013761          304 VVAFKYDAGMDAKFEL  319 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~  319 (437)
                      |+.+|.+.+.+.....
T Consensus       140 Y~asKaa~~~~~~~la  155 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLA  155 (244)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHH
Confidence            7777776665554333

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.69  E-value=4.9e-16  Score=149.23  Aligned_cols=199  Identities=13%  Similarity=0.095  Sum_probs=129.1

Q ss_pred             CCCCEEEEECCCCh--HHHHHHHHHHHCCCeEEEEecCCcH-H----HHhhCCC-CeEEEEecCCCHHHHHHHHhc----
Q 013761          159 AQNTTVLVVGATSR--IGRIVIRKLMLRGYSVKALVRKADQ-E----VVDMLPR-SVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~--IG~~la~~Ll~~G~~V~~~~R~~~~-~----~~~~~~~-~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      +.+|++|||||+|+  ||++++++|+++|++|++++|+... +    ....... .+.++.+|++|.++++++++.    
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            67899999999966  9999999999999999999998642 1    1222333 789999999999999988874    


Q ss_pred             ---ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          227 ---CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                         +|+||||||+...             .+...+++|+.|++++++++.+      .|...  +       +++..++.
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~--g-------~iv~isS~  149 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARP------MMTEG--G-------SIVTLTYL  149 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG------GCTTC--E-------EEEEEECG
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHh------hcCCC--c-------eEEEEecc
Confidence               5999999997541             1456899999999999999944      33211  1       34444444


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc-----eec----ccc-CCCcccHHHH
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV-----ELS----KKL-SLPLGCTLDR  354 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~-----~i~----~~~-~~p~g~v~D~  354 (437)
                      ......|  ....|+.+|.+...+......+..   .   .+.++.+.++....     ...    ... ....+..+|+
T Consensus       150 ~~~~~~~--~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dv  227 (266)
T 3oig_A          150 GGELVMP--NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEV  227 (266)
T ss_dssp             GGTSCCT--TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             cccccCC--CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHH
Confidence            3332223  356688888877666544444332   2   23333333321100     000    000 0112357888


Q ss_pred             HHHHHHHhc-----cCCcEEEEEcc
Q 013761          355 YEGLVLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       355 ~~gi~l~~~-----~~Ge~y~l~l~  374 (437)
                      +++++..+.     -.|+.+.+.++
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCC
Confidence            888887763     34777777433

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.69  E-value=1.7e-16  Score=147.94  Aligned_cols=131  Identities=15%  Similarity=0.153  Sum_probs=98.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHH-HCCCeEEEEecCCc-HH-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLM-LRGYSVKALVRKAD-QE-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll-~~G~~V~~~~R~~~-~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +|+|+||||||+|+||++++++|+ ++|++|++++|+.+ .. .+......+.++.+|++|.++++++++++|+||||||
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag   82 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM   82 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence            345789999999999999999999 89999999999865 31 1111456899999999999999999999999999998


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--------------------CcchhhhhhhhhccCCCCccee
Q 013761          236 ARSTITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--------------------KSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       236 ~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--------------------~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                      ..          |+. +.++++++++.+++ +..+++.                    .|..+|...+.++...++.+++
T Consensus        83 ~~----------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~  151 (221)
T 3r6d_A           83 ES----------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTI  151 (221)
T ss_dssp             CC----------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEE
T ss_pred             CC----------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEE
Confidence            64          444 88999999998874 5555432                    2233344444555555666666


Q ss_pred             eccCcc
Q 013761          295 VRQGTY  300 (437)
Q Consensus       295 ~rP~~~  300 (437)
                      ++|+.+
T Consensus       152 vrpg~v  157 (221)
T 3r6d_A          152 LRLTWL  157 (221)
T ss_dssp             EEECEE
T ss_pred             Eechhh
Confidence            666644

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.69  E-value=4.1e-16  Score=148.36  Aligned_cols=199  Identities=17%  Similarity=0.090  Sum_probs=129.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++++...   +.   +......+.++.+|++|.++++++++.     
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999987544332   11   223355788999999999998887764     


Q ss_pred             --------ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCC
Q 013761          227 --------CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADS  289 (437)
Q Consensus       227 --------~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ss  289 (437)
                              +|+||||||+....         +++.+++|+.|++++++++      ++.|...  +       +++..++
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~--~-------~iv~isS  148 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQA------LSRLRDN--S-------RIINISS  148 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------TTTEEEE--E-------EEEEECC
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHH------HHhhCCC--C-------EEEEeCC
Confidence                    79999999975322         4668999999999999999      4444211  1       3555555


Q ss_pred             CcceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCcccee-----c-----cccCCCcccHHH
Q 013761          290 LNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVEL-----S-----KKLSLPLGCTLD  353 (437)
Q Consensus       290 l~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~i-----~-----~~~~~p~g~v~D  353 (437)
                      .......|  ....|+.+|.+...+......+.   +.   .+.++.+.++......     .     .......+..+|
T Consensus       149 ~~~~~~~~--~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  226 (255)
T 3icc_A          149 AATRISLP--DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVED  226 (255)
T ss_dssp             GGGTSCCT--TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHH
T ss_pred             hhhccCCC--CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHH
Confidence            44332233  35678888887776654444433   22   2334444333210000     0     000112236788


Q ss_pred             HHHHHHHHhc-----cCCcEEEEEc
Q 013761          354 RYEGLVLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       354 ~~~gi~l~~~-----~~Ge~y~l~l  373 (437)
                      ++++++..+.     -.|+.+.+.+
T Consensus       227 va~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          227 IADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHhCcccCCccCCEEEecC
Confidence            8888876652     3477777643

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.69  E-value=1.7e-16  Score=149.86  Aligned_cols=100  Identities=15%  Similarity=0.207  Sum_probs=80.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--HH---HhhCCCCeEE-EEecCCCHHHHHHHHh-------c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--EV---VDMLPRSVEI-VLGDVGDPCTLKAAVE-------N  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~~---~~~~~~~v~~-v~~Dltd~~~v~~a~~-------~  226 (437)
                      +|+||||||+||||++++++|+++|++|+++ +|+.+.  +.   +......+.+ +.+|++|.++++++++       +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 776542  11   1222445666 8999999999998876       5


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      +|+||||||....         .+++.+++|+.|++++++++.
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~  123 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAV  123 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHH
Confidence            7999999997542         146789999999888888774

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.69  E-value=2.7e-16  Score=148.66  Aligned_cols=188  Identities=12%  Similarity=0.046  Sum_probs=119.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcH--HHHh---hCCCCeEEEEecCCCHHHHHHHHh---
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQ--EVVD---MLPRSVEIVLGDVGDPCTLKAAVE---  225 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~--~~~~---~~~~~v~~v~~Dltd~~~v~~a~~---  225 (437)
                      +|+||||||+||||++++++|+++|+       +|++++|+.+.  ....   .....+.++.+|++|+++++++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            67999999999999999999999999       99999998652  1111   224568899999999999998887   


Q ss_pred             ----cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          226 ----NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       226 ----~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                          .+|+||||||....         .+++.+++|+.|++++++++.+      .|.....       .+++..++...
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~-------~~iv~isS~~~  148 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFA------LMERQHS-------GHIFFITSVAA  148 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHTC-------EEEEEECCGGG
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHhCCC-------CEEEEEecchh
Confidence                47999999997532         1567899999999999999843      2221111       12333333322


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhc---ccccce---eeeeeeccCccceeccccCCCcccHHHHHHHHHHHhcc
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELS---ETGDAV---FSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGG  364 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~---~~~~~v---~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~  364 (437)
                      ..  +......|+.+|.+.+.+......   ..+..+   .++.+.++... .............+|++++++..+..
T Consensus       149 ~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~dva~~~~~l~~~  223 (244)
T 2bd0_A          149 TK--AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG-KVDDEMQALMMMPEDIAAPVVQAYLQ  223 (244)
T ss_dssp             TS--CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC-CCCSTTGGGSBCHHHHHHHHHHHHTS
T ss_pred             cC--CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhh-hccccccccCCCHHHHHHHHHHHHhC
Confidence            21  222345688888776655432222   223322   23333332210 00000011234688999988887753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.69  E-value=8.4e-17  Score=153.63  Aligned_cols=96  Identities=18%  Similarity=0.209  Sum_probs=83.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VI  231 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+.   ...  .+.++.+|++|+++++++++       .+|+||
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---EQY--PFATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---SCC--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---hcC--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            678999999999999999999999999999999998652   111  37889999999999999887       579999


Q ss_pred             EeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          232 YCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       232 h~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      ||||+...         .+++.+++|+.|++++++++
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  116 (250)
T 2fwm_X           80 NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQT  116 (250)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence            99997532         25679999999999999998

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.69  E-value=3.4e-16  Score=152.22  Aligned_cols=201  Identities=12%  Similarity=0.018  Sum_probs=128.9

Q ss_pred             CCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhC---CCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDML---PRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~---~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      +|.+|++|||||+  ||||++++++|+++|++|++++|+.+. +..+.+   ...+.++.+|++|.++++++++      
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999  999999999999999999999998641 111111   1247889999999999998887      


Q ss_pred             -cccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          226 -NCNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                       .+|+||||||+...             .+++.+++|+.|++++++++.+      .|... .+       +++..++..
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~-~g-------~iv~isS~~  163 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLP------LMEGR-NG-------AIVTLSYYG  163 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG------GGTTS-CC-------EEEEEECGG
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHHHc-CC-------EEEEEccch
Confidence             46999999997532             1456899999999999999944      33211 01       344444433


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc-----eec----cc-cCCCcccHHHHH
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV-----ELS----KK-LSLPLGCTLDRY  355 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~-----~i~----~~-~~~p~g~v~D~~  355 (437)
                      .....|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++....     ...    .. .....+..+|++
T Consensus       164 ~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva  241 (285)
T 2p91_A          164 AEKVVP--HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVG  241 (285)
T ss_dssp             GTSBCT--TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred             hccCCC--CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHH
Confidence            222222  34568888877766654433332   33   23344443332100     000    00 001124688999


Q ss_pred             HHHHHHhc-----cCCcEEEEEcc
Q 013761          356 EGLVLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       356 ~gi~l~~~-----~~Ge~y~l~l~  374 (437)
                      ++++..+.     -.|+.+.+.++
T Consensus       242 ~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          242 DTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHcCCcccCCCCCEEEECCC
Confidence            99887773     24777777433

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.69  E-value=2.9e-16  Score=153.87  Aligned_cols=200  Identities=10%  Similarity=-0.017  Sum_probs=129.0

Q ss_pred             CCCCCCEEEEECCCCh--HHHHHHHHHHHCCCeEEEEecCCcH-HHHhh---CCCCeEEEEecCCCHHHHHHHHh-----
Q 013761          157 PGAQNTTVLVVGATSR--IGRIVIRKLMLRGYSVKALVRKADQ-EVVDM---LPRSVEIVLGDVGDPCTLKAAVE-----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~--IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~---~~~~v~~v~~Dltd~~~v~~a~~-----  225 (437)
                      .++.+|++|||||+|+  ||++++++|+++|++|++++|+... +..+.   ....+.++.+|++|.++++++++     
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            3478999999999966  9999999999999999999998541 11111   12368899999999999999887     


Q ss_pred             --cccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          226 --NCNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                        .+|+||||||+...             .+++.+++|+.|++++++++.+...+        .+       +++..++.
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--------~g-------~Iv~isS~  171 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--------GG-------SILTLTYY  171 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--------CE-------EEEEEECG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CC-------EEEEEeeh
Confidence              46999999998641             15678999999999999999553321        11       34444443


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhcccc---c---ceeeeeeeccCccc-----eec----cc-cCCCcccHHHH
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSETG---D---AVFSGYVFTRGGYV-----ELS----KK-LSLPLGCTLDR  354 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~---~---~v~~g~~~~~~G~~-----~i~----~~-~~~p~g~v~D~  354 (437)
                      ......|  ....|+.+|.+...+......+++   .   .+.++.+.++....     ...    .. .....+..+|+
T Consensus       172 ~~~~~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  249 (293)
T 3grk_A          172 GAEKVMP--NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEV  249 (293)
T ss_dssp             GGTSBCT--TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             hhccCCC--chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHH
Confidence            3322222  356788888877766654444432   2   23333333321100     000    00 01112367899


Q ss_pred             HHHHHHHhc-----cCCcEEEEEc
Q 013761          355 YEGLVLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       355 ~~gi~l~~~-----~~Ge~y~l~l  373 (437)
                      +++++..+.     -.|+.+.+.+
T Consensus       250 A~~v~~L~s~~~~~itG~~i~vdG  273 (293)
T 3grk_A          250 GDVGLYFLSDLSRSVTGEVHHADS  273 (293)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHcCccccCCcceEEEECC
Confidence            988887663     3578777743

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=9.7e-17  Score=152.69  Aligned_cols=102  Identities=13%  Similarity=0.115  Sum_probs=84.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh~  233 (437)
                      .|++|++|||||+||||++++++|+++|++|++++|+.+.. ....+ .++.++.+|++|+++++++++   .+|+||||
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-PGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhc-cCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            36789999999999999999999999999999999986521 11122 268899999999999987765   46999999


Q ss_pred             ccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          234 ATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       234 Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||+...         .+++.+++|+.|++++++++.
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~  117 (246)
T 2ag5_A           82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL  117 (246)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            997542         156789999999999999984

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.69  E-value=4e-16  Score=152.52  Aligned_cols=104  Identities=16%  Similarity=0.228  Sum_probs=86.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh--------CCCCeEEEEecCCCHHHHHHHHhc-
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM--------LPRSVEIVLGDVGDPCTLKAAVEN-  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~--------~~~~v~~v~~Dltd~~~v~~a~~~-  226 (437)
                      .|.+|+||||||+||||++++++|+++|++|++++|+.+.  ...++        ....+.++.+|++|.++++++++. 
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            3778999999999999999999999999999999998652  11111        245789999999999999998875 


Q ss_pred             ------ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 ------CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 ------~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                            +|+||||||....         .+++.+++|+.|++++++++.+
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  144 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS  144 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                  7999999996432         1466899999999999999855

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.69  E-value=2.5e-16  Score=149.38  Aligned_cols=150  Identities=17%  Similarity=0.164  Sum_probs=108.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhC-CCCeEEEEecC--CCHHHHHHHHh----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDML-PRSVEIVLGDV--GDPCTLKAAVE----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~-~~~v~~v~~Dl--td~~~v~~a~~----  225 (437)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+.  +.   +... ...+.++.+|+  +|.++++++++    
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998652  11   1222 24677788887  99999988876    


Q ss_pred             ---cccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          226 ---NCNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                         .+|+||||||+...          .+++.+++|+.|++++++++      ++.|.....+       +++..++...
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~~~~-------~iv~isS~~~  157 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRAL------LPLLKRSEDA-------SIAFTSSSVG  157 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHTTSSSE-------EEEEECCGGG
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHhCCCC-------eEEEEcchhh
Confidence               46999999997532          15678999999999999999      4444332222       3444444433


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ....|  ....|+.+|.+.+.+......+.
T Consensus       158 ~~~~~--~~~~Y~~sK~a~~~~~~~la~e~  185 (247)
T 3i1j_A          158 RKGRA--NWGAYGVSKFATEGLMQTLADEL  185 (247)
T ss_dssp             TSCCT--TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCC--CcchhHHHHHHHHHHHHHHHHHh
Confidence            22222  35678888888777665444443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.69  E-value=3e-16  Score=150.71  Aligned_cols=198  Identities=13%  Similarity=0.031  Sum_probs=127.7

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhC---CCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDML---PRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~---~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      |++|++|||||+  ||||++++++|+++|++|++++|+.+. +..+.+   ...+.++.+|++|+++++++++       
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999  999999999999999999999998641 111111   1247889999999999998887       


Q ss_pred             cccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          226 NCNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                      .+|+||||||+...             .+++.+++|+.|++++++++.      +.|..  .+       +++..++...
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~~~~--~g-------~iv~isS~~~  150 (261)
T 2wyu_A           86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE------PLLRE--GG-------GIVTLTYYAS  150 (261)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT------TTEEE--EE-------EEEEEECGGG
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH------HHhcc--CC-------EEEEEecccc
Confidence            46999999997532             156789999999999999994      33321  01       3444444332


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhccc---ccc---eeeeeeeccCccc-----eec----cc-cCCCcccHHHHHH
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSET---GDA---VFSGYVFTRGGYV-----ELS----KK-LSLPLGCTLDRYE  356 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~~---v~~g~~~~~~G~~-----~i~----~~-~~~p~g~v~D~~~  356 (437)
                      ....|  ....|+.+|.+.+.+......++   +..   +.++.+.++....     ...    .. .....+..+|+++
T Consensus       151 ~~~~~--~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~  228 (261)
T 2wyu_A          151 EKVVP--KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGN  228 (261)
T ss_dssp             TSBCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred             cCCCC--CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            22222  24567788877766554433333   322   3333333332100     000    00 0011346889999


Q ss_pred             HHHHHhc-----cCCcEEEEEc
Q 013761          357 GLVLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       357 gi~l~~~-----~~Ge~y~l~l  373 (437)
                      +++..+.     -.|+.+.+.+
T Consensus       229 ~v~~l~s~~~~~~tG~~~~vdg  250 (261)
T 2wyu_A          229 LGLFLLSPLASGITGEVVYVDA  250 (261)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHcChhhcCCCCCEEEECC
Confidence            8887763     2477777643

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.69  E-value=1.8e-16  Score=148.61  Aligned_cols=183  Identities=16%  Similarity=0.106  Sum_probs=122.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh~Ag  235 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+               +|++|+++++++++   .+|+||||||
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            67899999999999999999999999999999998743               89999999999987   4699999999


Q ss_pred             CCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhh
Q 013761          236 ARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       236 ~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      +...          .+++.+++|+.|++++++++      ++.|...  +       +++..++.......|  ....|.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~~~~~--g-------~iv~~sS~~~~~~~~--~~~~Y~  131 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHG------ARYLKQG--G-------SITLTSGMLSRKVVA--NTYVKA  131 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHH------GGGEEEE--E-------EEEEECCGGGTSCCT--TCHHHH
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHH------HhhccCC--e-------EEEEecchhhccCCC--CchHHH
Confidence            7521          15678999999999999999      4444321  1       355555543332222  356788


Q ss_pred             hhhhhcccchhhhhccccc----ceeeeeeeccCccce-------e----ccc-cCCCcccHHHHHHHHHHHhc---cCC
Q 013761          306 AFKYDAGMDAKFELSETGD----AVFSGYVFTRGGYVE-------L----SKK-LSLPLGCTLDRYEGLVLSVG---GNG  366 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~----~v~~g~~~~~~G~~~-------i----~~~-~~~p~g~v~D~~~gi~l~~~---~~G  366 (437)
                      .+|.+.+.+......+++.    .+.++.+.++.....       .    ... .....+..+|++++++..+.   -.|
T Consensus       132 asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG  211 (223)
T 3uce_A          132 AINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTG  211 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCC
Confidence            8888777666555444432    223333333211000       0    000 11112368899988887763   357


Q ss_pred             cEEEEEc
Q 013761          367 RSYVLIL  373 (437)
Q Consensus       367 e~y~l~l  373 (437)
                      +.+.+.+
T Consensus       212 ~~i~vdg  218 (223)
T 3uce_A          212 TVIDVDG  218 (223)
T ss_dssp             CEEEEST
T ss_pred             cEEEecC
Confidence            7776643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.69  E-value=2.3e-16  Score=144.94  Aligned_cols=180  Identities=16%  Similarity=0.049  Sum_probs=115.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc---ccEEEEeccCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN---CNKIIYCATARS  238 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh~Ag~~~  238 (437)
                      |+||||||+||||++++++|+ +|++|++++|+.+            ++.+|++|++++++++++   +|+||||||...
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            389999999999999999999 9999999999753            468999999999999987   799999999753


Q ss_pred             Cc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhh
Q 013761          239 TI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKY  309 (437)
Q Consensus       239 ~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~  309 (437)
                      ..         +.+.+++|+.|++++++++.+.      +...  +       +++..++....  .|......|+.+|.
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~--~-------~iv~~sS~~~~--~~~~~~~~Y~~sK~  133 (202)
T 3d7l_A           71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDS------LNDK--G-------SFTLTTGIMME--DPIVQGASAAMANG  133 (202)
T ss_dssp             CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGG------EEEE--E-------EEEEECCGGGT--SCCTTCHHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHH------hccC--C-------EEEEEcchhhc--CCCCccHHHHHHHH
Confidence            21         3567899999999999999543      2110  0       23333332221  12223456777777


Q ss_pred             hcccchhhhhccc--ccceeeeeeeccCccce-ecccc-CCCcccHHHHHHHHHHHhc--cCCcEEEE
Q 013761          310 DAGMDAKFELSET--GDAVFSGYVFTRGGYVE-LSKKL-SLPLGCTLDRYEGLVLSVG--GNGRSYVL  371 (437)
Q Consensus       310 a~~~~~~~~~~~~--~~~v~~g~~~~~~G~~~-i~~~~-~~p~g~v~D~~~gi~l~~~--~~Ge~y~l  371 (437)
                      ..+........+.  +..+...++...++... ..... .....+++|++++++..+.  ..|+.|++
T Consensus       134 ~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          134 AVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKLEPFFEGFLPVPAAKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHHGGGSTTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred             HHHHHHHHHHHHccCCeEEEEEecCccCCchhhhhhhccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence            7666554433332  33322222221111100 00000 1122368999999887763  34666654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.68  E-value=4.9e-17  Score=159.13  Aligned_cols=189  Identities=20%  Similarity=0.205  Sum_probs=126.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhc--
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY---SVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVEN--  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~---~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~--  226 (437)
                      |.+|++|||||+||||++++++|+++|+   +|++++|+.+.  +..+.+     ...+.++.+|++|.++++++++.  
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999998   99999998652  112211     45788999999999999999984  


Q ss_pred             -----ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 -----CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 -----~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                           +|+||||||+...          .|++++++|+.|++++++++      ++.|.....+       +++..+++.
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------~IV~isS~~  177 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAV------LPIFQAKNSG-------DIVNLGSIA  177 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCC-------EEEEECCGG
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHhcCCC-------eEEEECChh
Confidence                 5999999997531          15679999999999999999      4444322221       355555544


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCcc------ce-ecccc--CCCcccHHHHHH
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGY------VE-LSKKL--SLPLGCTLDRYE  356 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~------~~-i~~~~--~~p~g~v~D~~~  356 (437)
                      .....|  ....|+.+|.+...+......+.   +.   .+.++.+.++...      .. ....+  ..|. ..+|+++
T Consensus       178 ~~~~~~--~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~pedvA~  254 (287)
T 3rku_A          178 GRDAYP--TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL-MADDVAD  254 (287)
T ss_dssp             GTSCCT--TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCE-EHHHHHH
T ss_pred             hcCCCC--CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCC-CHHHHHH
Confidence            433223  35668888887776665444443   22   3344444443210      00 00000  1122 5678888


Q ss_pred             HHHHHhc
Q 013761          357 GLVLSVG  363 (437)
Q Consensus       357 gi~l~~~  363 (437)
                      +++..+.
T Consensus       255 ~v~~l~s  261 (287)
T 3rku_A          255 LIVYATS  261 (287)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhC
Confidence            8887774

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.68  E-value=7.1e-16  Score=148.31  Aligned_cols=197  Identities=11%  Similarity=0.050  Sum_probs=127.6

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhC---CCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDML---PRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      |.+|++|||||+  ||||++++++|+++|++|++++|+.. .+..+.+   .....++.+|++|+++++++++       
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            678999999999  99999999999999999999999863 1111111   1234788999999999999887       


Q ss_pred             cccEEEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          226 NCNKIIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                      .+|+||||||+...              .+++.+++|+.|++++++++      ++.|...  +       +++..++..
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~--g-------~iv~isS~~  151 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC------RSMLNPG--S-------ALLTLSYLG  151 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH------GGGEEEE--E-------EEEEEECGG
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHH------HHHhccC--C-------EEEEEcchh
Confidence            46999999997541              14568999999999999999      4444310  1       344444433


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc-----eecc----c-cCCCcccHHHHH
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV-----ELSK----K-LSLPLGCTLDRY  355 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~-----~i~~----~-~~~p~g~v~D~~  355 (437)
                      .....|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++....     ....    . .....+..+|++
T Consensus       152 ~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva  229 (265)
T 1qsg_A          152 AERAIP--NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVG  229 (265)
T ss_dssp             GTSBCT--TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred             hccCCC--CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHH
Confidence            222222  34568888887776654443333   22   23344444432110     0000    0 001124688999


Q ss_pred             HHHHHHhcc-----CCcEEEEE
Q 013761          356 EGLVLSVGG-----NGRSYVLI  372 (437)
Q Consensus       356 ~gi~l~~~~-----~Ge~y~l~  372 (437)
                      ++++..+..     .|+.+.+.
T Consensus       230 ~~v~~l~s~~~~~~tG~~~~vd  251 (265)
T 1qsg_A          230 NSAAFLCSDLSAGISGEVVHVD  251 (265)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCchhcCccCCEEEEC
Confidence            988877631     47777664

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.68  E-value=3e-16  Score=147.58  Aligned_cols=96  Identities=24%  Similarity=0.283  Sum_probs=83.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh------cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE------NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~------~~D~VIh~  233 (437)
                      ++|+||||||+||||++++++|+++|++|++++|+.+       ...+.++.+|++|.++++++++      .+|+||||
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence            3689999999999999999999999999999999864       1246889999999999999988      67999999


Q ss_pred             ccCCCC-------------chhhHHHHHHHHHHHHHHHHHhc
Q 013761          234 ATARST-------------ITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       234 Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ||....             .+++.+++|+.|++++++++.+.
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  115 (242)
T 1uay_A           74 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWA  115 (242)
T ss_dssp             CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            997532             35678999999999999998653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.68  E-value=2.8e-16  Score=149.03  Aligned_cols=194  Identities=11%  Similarity=0.013  Sum_probs=124.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---------~~D~  229 (437)
                      .++|++|||||+||||++++++|+++|++|++++|+.+..     .....++.+|++|+++++++++         .+|+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc-----cCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            4678999999999999999999999999999999986531     1245778899999999988886         5799


Q ss_pred             EEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ||||||+...          .+++.+++|+.|++++++++.+      .|...  +       +++..++.......|  
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~------~~~~~--g-------~iv~isS~~~~~~~~--  142 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATK------HLKEG--G-------LLTLAGAKAALDGTP--  142 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHH------HEEEE--E-------EEEEECCGGGGSCCT--
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH------hhccC--C-------EEEEECCHHHccCCC--
Confidence            9999997531          1456899999999999999944      33211  1       345545443322222  


Q ss_pred             ccchhhhhhhhcccchhhhhcccc-----c---ceeeeeeeccCccceec-cccCCCcccHHHHHHHHHHHhc-----cC
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETG-----D---AVFSGYVFTRGGYVELS-KKLSLPLGCTLDRYEGLVLSVG-----GN  365 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~-----~---~v~~g~~~~~~G~~~i~-~~~~~p~g~v~D~~~gi~l~~~-----~~  365 (437)
                      ....|..+|.+.+.+......+.+     .   .+.++.+.++....... ..+ ......+|+++.++..+.     -+
T Consensus       143 ~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~vA~~v~~l~~~~~~~~~  221 (241)
T 1dhr_A          143 GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF-SSWTPLEFLVETFHDWITGNKRPNS  221 (241)
T ss_dssp             TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG-GGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchhh-ccCCCHHHHHHHHHHHhcCCCcCcc
Confidence            345688888777665544444332     2   22333333321100000 000 001135788888877663     24


Q ss_pred             CcEEEEEccC
Q 013761          366 GRSYVLILEA  375 (437)
Q Consensus       366 Ge~y~l~l~~  375 (437)
                      |+.+.+.++.
T Consensus       222 G~~~~v~g~~  231 (241)
T 1dhr_A          222 GSLIQVVTTD  231 (241)
T ss_dssp             TCEEEEEEET
T ss_pred             ceEEEEeCCC
Confidence            7777665443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.68  E-value=2.2e-16  Score=148.51  Aligned_cols=99  Identities=20%  Similarity=0.260  Sum_probs=82.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~V  230 (437)
                      ++|+||||||+||||++++++|+++|++|++++|+.+.  ...+.+. ++.++.+|++|.++++++++       .+|+|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDVREEGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999999998652  2222332 68899999999999988886       46999


Q ss_pred             EEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          231 IYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       231 Ih~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                      |||||....         .+++.+++|+.|++++++++
T Consensus        83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~  120 (234)
T 2ehd_A           83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA  120 (234)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            999997532         14668999999999888887

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.68  E-value=6.3e-17  Score=153.08  Aligned_cols=94  Identities=18%  Similarity=0.258  Sum_probs=80.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh----cccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~Ag~  236 (437)
                      ||+||||||+||||++++++|+++|++|++++|+.+...     .   .+.+|++|.++++++++    ++|+||||||.
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----A---DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----C---CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----c---cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            368999999999999999999999999999999865310     0   15689999999999987    78999999998


Q ss_pred             CC--CchhhHHHHHHHHHHHHHHHHHhc
Q 013761          237 RS--TITGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       237 ~~--~~~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ..  ..++..+++|+.|++++++++.+.
T Consensus        73 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~  100 (255)
T 2dkn_A           73 GVTAANSGLVVAVNYFGVSALLDGLAEA  100 (255)
T ss_dssp             CTTSSCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCcchhHHHHHHHHhHHHHHHHHHHHHH
Confidence            64  347889999999999999988664

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.68  E-value=1.7e-16  Score=154.33  Aligned_cols=193  Identities=18%  Similarity=0.112  Sum_probs=122.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hCC-CCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---MLP-RSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~~-~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      +.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+   ..+ ..+.++.+|++|.++++++++       
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999998652  1111   112 368899999999999988886       


Q ss_pred             cccEEEEe-ccCCCC--------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          226 NCNKIIYC-ATARST--------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       226 ~~D~VIh~-Ag~~~~--------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      ++|+|||| ||....        .+++.+++|+.|+.++++++.+      .|....        .+++..++.......
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~------~~~~~~--------g~iv~isS~~~~~~~  171 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALP------MLKQSN--------GSIVVVSSLAGKVAY  171 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHH------HHHHHT--------CEEEEEEEGGGTSCC
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHH------HHHHCC--------CEEEEECCcccccCC
Confidence            57999999 565432        1456899999999999999843      221110        123333333222112


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc-----cc---ceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhccCCc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET-----GD---AVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGR  367 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~-----~~---~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~Ge  367 (437)
                      |  ....|+.+|...+.+......+.     +.   .+.++.+.++............+....+|+++.++..+..+..
T Consensus       172 ~--~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~  248 (286)
T 1xu9_A          172 P--MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQE  248 (286)
T ss_dssp             T--TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHTTCS
T ss_pred             C--CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccccccCCCCCHHHHHHHHHHHHhcCCc
Confidence            2  35668888887766554433333     22   2223333332110000001111122578999999988854433

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.68  E-value=2.5e-16  Score=156.89  Aligned_cols=205  Identities=17%  Similarity=0.122  Sum_probs=128.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-cCCcH--HHHh----hCCCCeEEEEecCCCHH-------------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALV-RKADQ--EVVD----MLPRSVEIVLGDVGDPC-------------  218 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~-R~~~~--~~~~----~~~~~v~~v~~Dltd~~-------------  218 (437)
                      |.+|++|||||+||||++++++|+++|++|++++ |+.+.  +..+    ..+..+.++.+|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            6789999999999999999999999999999999 87542  1111    23457899999999999             


Q ss_pred             ----HHHHHHh-------cccEEEEeccCCCC-----------------------chhhHHHHHHHHHHHHHHHHHhcCC
Q 013761          219 ----TLKAAVE-------NCNKIIYCATARST-----------------------ITGDLFRVDYQGVYNVTKAFQDFNN  264 (437)
Q Consensus       219 ----~v~~a~~-------~~D~VIh~Ag~~~~-----------------------~~~~~~~vNv~gt~~l~~aa~~~gv  264 (437)
                          +++++++       .+|+||||||+...                       .++.++++|+.|++++++++     
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~-----  198 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF-----  198 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH-----
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH-----
Confidence                8988887       56999999997431                       13468999999999999998     


Q ss_pred             ceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc
Q 013761          265 KLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV  338 (437)
Q Consensus       265 kl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~  338 (437)
                       ++.|...... ......+++..++.......|  ....|..+|.+...+......++   +.   .+.++.+.++....
T Consensus       199 -~~~m~~~~~~-~~~~~g~IV~isS~~~~~~~~--~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  274 (328)
T 2qhx_A          199 -AHRVAGTPAK-HRGTNYSIINMVDAMTNQPLL--GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP  274 (328)
T ss_dssp             -HHHHHHSCGG-GSCSCEEEEEECCTTTTSCCT--TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCCCSC
T ss_pred             -HHHHHhcCCc-CCCCCcEEEEECchhhccCCC--CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCcccc
Confidence             4444322100 000001355555543322222  34568888887766654443333   22   23344443332100


Q ss_pred             -e----eccccCC--CcccHHHHHHHHHHHhc-----cCCcEEEEE
Q 013761          339 -E----LSKKLSL--PLGCTLDRYEGLVLSVG-----GNGRSYVLI  372 (437)
Q Consensus       339 -~----i~~~~~~--p~g~v~D~~~gi~l~~~-----~~Ge~y~l~  372 (437)
                       .    .......  ..+..+|++++++..+.     -.|+.+.+.
T Consensus       275 ~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vd  320 (328)
T 2qhx_A          275 PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVD  320 (328)
T ss_dssp             HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence             0    0001111  23367888888887762     247776664

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.68  E-value=2.1e-16  Score=154.03  Aligned_cols=104  Identities=21%  Similarity=0.323  Sum_probs=83.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---C-CCCeEEEEecCCCH-HHHHHHHh-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---L-PRSVEIVLGDVGDP-CTLKAAVE-----  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~-~~~v~~v~~Dltd~-~~v~~a~~-----  225 (437)
                      ++.+|+||||||+||||++++++|+++|++|++++|+.+.  +..+.   . ...+.++.+|++|. ++++++++     
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999998752  12222   2 34789999999998 88877776     


Q ss_pred             --cccEEEEeccCCCC---------------------------------------chhhHHHHHHHHHHHHHHHHHh
Q 013761          226 --NCNKIIYCATARST---------------------------------------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 --~~D~VIh~Ag~~~~---------------------------------------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        .+|+||||||+...                                       .+++.+++|+.|++++++++..
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence              56999999998632                                       1345799999999999999854

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.68  E-value=2.1e-16  Score=153.04  Aligned_cols=103  Identities=20%  Similarity=0.218  Sum_probs=83.1

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hC--CCCeEEEEecCCCHHHHHHHHh----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---ML--PRSVEIVLGDVGDPCTLKAAVE----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~--~~~v~~v~~Dltd~~~v~~a~~----  225 (437)
                      ..|.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+   ..  ...+.++.+|++|+++++++++    
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999998652  1111   11  2457889999999999998887    


Q ss_pred             ---cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          226 ---NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                         .+|+||||||+...         .+++.+++|+.|++++++++
T Consensus       108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~  153 (279)
T 1xg5_A          108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA  153 (279)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence               57999999997532         15678999999977766665

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.68  E-value=2.6e-16  Score=148.66  Aligned_cols=141  Identities=12%  Similarity=0.095  Sum_probs=102.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---------cccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---------NCNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---------~~D~  229 (437)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..     .....++.+|++|.++++++++         .+|+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc-----ccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            3578999999999999999999999999999999986531     1245678899999999988876         5799


Q ss_pred             EEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ||||||+...          .+++.+++|+.|++++++++.+      .|...  +       +++..++.....  +..
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~--g-------~iv~isS~~~~~--~~~  138 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATT------HLKPG--G-------LLQLTGAAAAMG--PTP  138 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH------HEEEE--E-------EEEEECCGGGGS--CCT
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH------HhccC--C-------EEEEECchhhcc--CCC
Confidence            9999997431          1466899999999999999954      33210  1       344444443322  222


Q ss_pred             ccchhhhhhhhcccchhhhhcc
Q 013761          300 YFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ....|..+|.+.+.+......+
T Consensus       139 ~~~~Y~~sK~a~~~~~~~la~e  160 (236)
T 1ooe_A          139 SMIGYGMAKAAVHHLTSSLAAK  160 (236)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHST
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH
Confidence            3456777777766655444443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.68  E-value=5e-16  Score=148.91  Aligned_cols=201  Identities=9%  Similarity=-0.023  Sum_probs=130.0

Q ss_pred             CCCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhh---CCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          157 PGAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      ..+.+|+||||||+  ||||++++++|+++|++|++++|+... +..+.   ....+.++.+|++|.++++++++.    
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            34789999999999  999999999999999999999998542 11111   123588999999999999998874    


Q ss_pred             ---ccEEEEeccCCCC----------c----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCC
Q 013761          227 ---CNKIIYCATARST----------I----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADS  289 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~----------~----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ss  289 (437)
                         +|+||||||+...          .    ++..+++|+.|++++++++      ++.|...  +       +++..++
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~------~~~~~~~--g-------~iv~isS  154 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAA------LPMLSDD--A-------SLLTLSY  154 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHH------GGGEEEE--E-------EEEEEEC
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHH------HHHhccC--c-------eEEEEec
Confidence               5999999997532          1    4568999999999999999      4444321  1       3444444


Q ss_pred             CcceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc-----eec----cc-cCCCcccHHH
Q 013761          290 LNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV-----ELS----KK-LSLPLGCTLD  353 (437)
Q Consensus       290 l~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~-----~i~----~~-~~~p~g~v~D  353 (437)
                      .......|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++....     ...    .. .....+..+|
T Consensus       155 ~~~~~~~~--~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ped  232 (271)
T 3ek2_A          155 LGAERAIP--NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQ  232 (271)
T ss_dssp             GGGTSBCT--TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             cccccCCC--CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHH
Confidence            33322223  35678888887776665444433   22   23333333321100     000    00 0111236789


Q ss_pred             HHHHHHHHhc-----cCCcEEEEEcc
Q 013761          354 RYEGLVLSVG-----GNGRSYVLILE  374 (437)
Q Consensus       354 ~~~gi~l~~~-----~~Ge~y~l~l~  374 (437)
                      +++.++..+.     -.|+.+.+.++
T Consensus       233 va~~i~~l~s~~~~~~tG~~i~vdgG  258 (271)
T 3ek2_A          233 VGNAGAFLLSDLASGVTAEVMHVDSG  258 (271)
T ss_dssp             HHHHHHHHHSGGGTTCCSEEEEESTT
T ss_pred             HHHHHHHHcCcccCCeeeeEEEECCC
Confidence            9998887763     24777777443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.67  E-value=1.5e-16  Score=153.86  Aligned_cols=103  Identities=20%  Similarity=0.257  Sum_probs=86.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+. .+.++.+|++|.++++++++       .+|
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   84 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLD   84 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4788999999999999999999999999999999998652  2223332 48899999999999998887       469


Q ss_pred             EEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHh
Q 013761          229 KIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       229 ~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +||||||....          .+++.+++|+.|++++++++.+
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  127 (270)
T 1yde_A           85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP  127 (270)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99999997532          1567899999999999999853

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.67  E-value=5e-16  Score=150.28  Aligned_cols=198  Identities=10%  Similarity=0.011  Sum_probs=126.7

Q ss_pred             CCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhC---CCCeEEEEecCCCHHHHHHHHh------
Q 013761          158 GAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDML---PRSVEIVLGDVGDPCTLKAAVE------  225 (437)
Q Consensus       158 ~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~---~~~v~~v~~Dltd~~~v~~a~~------  225 (437)
                      +|.+|++|||||+  ||||++++++|+++|++|++++|+.+ .+..+.+   ...+.++.+|++|.++++++++      
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999  99999999999999999999999865 1111111   1247889999999999998887      


Q ss_pred             -cccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          226 -NCNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                       .+|+||||||+...             .++..+++|+.|++++++++      ++.|...  +       +++..++..
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~--g-------~iv~isS~~  147 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTL------KPLLNNG--A-------SVLTLSYLG  147 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------GGGEEEE--E-------EEEEEECGG
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHhccC--C-------EEEEEecch
Confidence             45999999997542             14678999999999999999      4444310  1       344444433


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccc-----eec----cccC-CCcccHHHHH
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYV-----ELS----KKLS-LPLGCTLDRY  355 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~-----~i~----~~~~-~p~g~v~D~~  355 (437)
                      .....|  ....|+.+|.+...+......+.   +.   .+.++.+.++....     ...    .... ...+..+|++
T Consensus       148 ~~~~~~--~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva  225 (275)
T 2pd4_A          148 STKYMA--HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVG  225 (275)
T ss_dssp             GTSBCT--TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred             hcCCCC--CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHH
Confidence            222222  34567778777666554433333   22   23334443332100     000    0000 1123578888


Q ss_pred             HHHHHHhc-----cCCcEEEEE
Q 013761          356 EGLVLSVG-----GNGRSYVLI  372 (437)
Q Consensus       356 ~gi~l~~~-----~~Ge~y~l~  372 (437)
                      ++++..+.     -.|+.+.+.
T Consensus       226 ~~~~~l~s~~~~~~tG~~~~vd  247 (275)
T 2pd4_A          226 NAGMYLLSSLSSGVSGEVHFVD  247 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHhCccccCCCCCEEEEC
Confidence            88887663     246666663

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.67  E-value=5.2e-16  Score=150.66  Aligned_cols=202  Identities=9%  Similarity=-0.012  Sum_probs=128.3

Q ss_pred             CCCCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcHHHHh---hCCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          156 IPGAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQEVVD---MLPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       156 ~~~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      +.++.+|+||||||+  +|||++++++|+++|++|++++|+...+..+   .....+.++.+|++|.++++++++.    
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            345789999999999  5599999999999999999999987322222   2223588999999999999998875    


Q ss_pred             ---ccEEEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCC
Q 013761          227 ---CNKIIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADS  289 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ss  289 (437)
                         +|+||||||+...              .+++.+++|+.|++++++++..      .|... .       .+++..++
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~------~~~~~-~-------g~iv~isS  166 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRS------MMKNR-N-------ASMVALTY  166 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHH------HHTTT-T-------CEEEEEEC
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHH------HhhcC-C-------CeEEEEec
Confidence               4999999998542              1456899999999999999944      33211 0       12344333


Q ss_pred             CcceeeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccce-----ec----c-ccCCCcccHHH
Q 013761          290 LNGWEVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVE-----LS----K-KLSLPLGCTLD  353 (437)
Q Consensus       290 l~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~-----i~----~-~~~~p~g~v~D  353 (437)
                      .......|  ....|+.+|.+.+.+......+.   +.   .+.++.+.++.....     ..    . ......+..+|
T Consensus       167 ~~~~~~~~--~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~ped  244 (280)
T 3nrc_A          167 IGAEKAMP--SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIME  244 (280)
T ss_dssp             GGGTSCCT--TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHH
T ss_pred             cccccCCC--CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHH
Confidence            33222222  35568888877766654433332   22   233333333221000     00    0 00111235789


Q ss_pred             HHHHHHHHhc-----cCCcEEEEEc
Q 013761          354 RYEGLVLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       354 ~~~gi~l~~~-----~~Ge~y~l~l  373 (437)
                      ++++++..+.     -.|+.+.+.+
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECC
Confidence            9988887663     3578777743

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.67  E-value=1e-15  Score=147.27  Aligned_cols=147  Identities=14%  Similarity=0.076  Sum_probs=106.2

Q ss_pred             CCCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhC-CCCeEEEEecCCCHHHHHHHHhc---
Q 013761          158 GAQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDML-PRSVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~-~~~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      +|++|++|||||+|  |||++++++|+++|++|++.+|+.+.  +   ..+.. ..++.++++|++|+++++++++.   
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            48999999999887  99999999999999999999998652  1   12222 34789999999999999888864   


Q ss_pred             ----ccEEEEeccCCCCc-------------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCC
Q 013761          227 ----CNKIIYCATARSTI-------------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADS  289 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~~-------------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ss  289 (437)
                          +|+||||||+....             |...+++|+.+++.+++++..      .+..  .|       .+++.++
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~------~~~~--~G-------~IVnisS  147 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKK------LMPE--GG-------SIVATTY  147 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHT------TCTT--CE-------EEEEEEC
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHH------Hhcc--CC-------EEEEEec
Confidence                49999999975321             345789999999999998843      2221  11       3556555


Q ss_pred             CcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          290 LNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       290 l~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +......|+  ...|..+|.+...+......+
T Consensus       148 ~~~~~~~~~--~~~Y~asKaal~~ltr~lA~E  177 (256)
T 4fs3_A          148 LGGEFAVQN--YNVMGVAKASLEANVKYLALD  177 (256)
T ss_dssp             GGGTSCCTT--THHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCccc--chhhHHHHHHHHHHHHHHHHH
Confidence            554433343  456777777666555433333

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.67  E-value=1.3e-16  Score=155.93  Aligned_cols=154  Identities=19%  Similarity=0.162  Sum_probs=105.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-cCCcH--HHHh----hCCCCeEEEEecCCCHH------------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALV-RKADQ--EVVD----MLPRSVEIVLGDVGDPC------------  218 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~-R~~~~--~~~~----~~~~~v~~v~~Dltd~~------------  218 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++ |+.+.  +..+    ..+..+.++.+|++|.+            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            47789999999999999999999999999999999 87642  1111    23457899999999999            


Q ss_pred             -----HHHHHHh-------cccEEEEeccCCCC-----------------------chhhHHHHHHHHHHHHHHHHHhcC
Q 013761          219 -----TLKAAVE-------NCNKIIYCATARST-----------------------ITGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       219 -----~v~~a~~-------~~D~VIh~Ag~~~~-----------------------~~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                           +++++++       .+|+||||||+...                       .++.++++|+.|++++++++    
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~----  161 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF----  161 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH----
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH----
Confidence                 9988887       56999999997531                       14568999999999999999    


Q ss_pred             CceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhc
Q 013761          264 NKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       264 vkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                        ++.|...... ......+++..++.......|  ....|..+|.+...+......
T Consensus       162 --~~~m~~~~~~-~~~~~g~Iv~isS~~~~~~~~--~~~~Y~asKaa~~~l~~~la~  213 (291)
T 1e7w_A          162 --AHRVAGTPAK-HRGTNYSIINMVDAMTNQPLL--GYTIYTMAKGALEGLTRSAAL  213 (291)
T ss_dssp             --HHHHHTSCGG-GSCSCEEEEEECCTTTTSCCT--TCHHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHhcCCC-CCCCCcEEEEEechhhcCCCC--CCchhHHHHHHHHHHHHHHHH
Confidence              4444322100 000001355555544332223  345688888776655543333

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.67  E-value=2e-16  Score=151.48  Aligned_cols=150  Identities=14%  Similarity=0.127  Sum_probs=108.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHH---CCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhc--
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLML---RGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVEN--  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~---~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~--  226 (437)
                      |.+|++|||||+||||++++++|++   +|++|++++|+.+.  +..+.+     ...+.++.+|++|+++++++++.  
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999   89999999998652  122222     34688999999999999887753  


Q ss_pred             -------cc--EEEEeccCCCC---------c---hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC--Ccchhhhhhhh
Q 013761          227 -------CN--KIIYCATARST---------I---TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG--KSSKSKLLLAK  283 (437)
Q Consensus       227 -------~D--~VIh~Ag~~~~---------~---~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~--~~g~sk~~~~k  283 (437)
                             +|  +||||||+...         .   +++.+++|+.|++++++++.      +.|...  ..+       +
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~------~~~~~~~~~~g-------~  150 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTL------NAFQDSPGLSK-------T  150 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHH------HTSCCCTTCEE-------E
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHH------HHHhhccCCCc-------e
Confidence                   47  99999997421         1   45689999999999999994      444322  111       4


Q ss_pred             hccCCCCcceeeccCcccchhhhhhhhcccchhhhhcccc
Q 013761          284 FKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       284 ~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      ++..++.......|  ....|+.+|.+.+.+......+..
T Consensus       151 iv~isS~~~~~~~~--~~~~Y~asKaa~~~~~~~la~e~~  188 (259)
T 1oaa_A          151 VVNISSLCALQPYK--GWGLYCAGKAARDMLYQVLAAEEP  188 (259)
T ss_dssp             EEEECCGGGTSCCT--TCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEEEcCchhcCCCC--CccHHHHHHHHHHHHHHHHHhhCC
Confidence            55555554332222  356788888887766655444443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.66  E-value=1.9e-16  Score=149.98  Aligned_cols=96  Identities=19%  Similarity=0.269  Sum_probs=80.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~VIh~  233 (437)
                      +|++|||||+||||++++++|+++|++|++++|+.+. ..+.+  .+.++.+|++| ++++++++       .+|+||||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-AAQSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899999999999999999999999999999998764 22233  27889999999 87777665       57999999


Q ss_pred             ccCCCC---------chhhHHHHHHHHHHHHHHHHH
Q 013761          234 ATARST---------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       234 Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                      ||+...         .+++.+++|+.|++++++++.
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  113 (239)
T 2ekp_A           78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA  113 (239)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            997532         156789999999999999983

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.66  E-value=1.7e-16  Score=151.97  Aligned_cols=146  Identities=15%  Similarity=0.151  Sum_probs=106.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      |+|++|||||+||||++++++|+++|  +.|++++|+.+.  +..+.++..+.++.+|++|.++++++++       .+|
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            46899999999999999999999985  789999998652  2233345678999999999999999887       469


Q ss_pred             EEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||+...          .|++.+++|+.|++++++++      ++.|....        .+++..++.......| 
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~------~~~m~~~~--------g~iv~isS~~~~~~~~-  145 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIA------LPELKKTN--------GNVVFVSSDACNMYFS-  145 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHT--------CEEEEECCSCCCCSSC-
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH------HHHHHhcC--------CeEEEEcCchhccCCC-
Confidence            99999998432          15678999999999999999      44443211        1355555544332223 


Q ss_pred             cccchhhhhhhhcccchhhhhcc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                       ....|..+|.+...+......+
T Consensus       146 -~~~~Y~asK~a~~~~~~~la~e  167 (254)
T 3kzv_A          146 -SWGAYGSSKAALNHFAMTLANE  167 (254)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CcchHHHHHHHHHHHHHHHHhh
Confidence             3567888888777666444433

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.66  E-value=5.8e-16  Score=148.32  Aligned_cols=159  Identities=13%  Similarity=0.066  Sum_probs=107.0

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCcH-HHHhh---CCCCeEEEEecCCCHHHHHHHHh----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRG---YSVKALVRKADQ-EVVDM---LPRSVEIVLGDVGDPCTLKAAVE----  225 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G---~~V~~~~R~~~~-~~~~~---~~~~v~~v~~Dltd~~~v~~a~~----  225 (437)
                      ..+++|+||||||+||||++++++|+++|   ++|++++|+.+. +.+..   ...++.++.+|++|.++++++++    
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            34788999999999999999999999999   999999998652 11121   14578999999999999998887    


Q ss_pred             -----cccEEEEeccCCC-C---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCc----chhhhhhhhhcc
Q 013761          226 -----NCNKIIYCATARS-T---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKS----SKSKLLLAKFKS  286 (437)
Q Consensus       226 -----~~D~VIh~Ag~~~-~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~----g~sk~~~~k~v~  286 (437)
                           .+|+||||||+.. .         .+++.+++|+.|++++++++.+.      |.....    ........+++.
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL------LKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHHHHTTTSCSSTTTCEEEE
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHH------HhhcccccccccccCCCceEEE
Confidence                 6899999999764 1         14568999999999999998442      221100    000000013444


Q ss_pred             CCCCcceeecc-Ccccchhhhhhhhcccchhhhhcc
Q 013761          287 ADSLNGWEVRQ-GTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       287 ~ssl~~~i~rP-~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      .++.......+ ......|+.+|.+.+.+......+
T Consensus       171 isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  206 (267)
T 1sny_A          171 MSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVD  206 (267)
T ss_dssp             ECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecccccccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            44433222111 113456889988877766544444

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.66  E-value=4e-16  Score=149.03  Aligned_cols=105  Identities=15%  Similarity=0.154  Sum_probs=87.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLML-RGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      ..+|+||||||+||||++++++|++ .|++|++++|+.+.  ..   +......+.++.+|++|.++++++++       
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999 99999999998652  11   12224578999999999999999887       


Q ss_pred             cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcC
Q 013761          226 NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      .+|+||||||+...         .++..+++|+.|++++++++.+..
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  128 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI  128 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhh
Confidence            67999999997532         245689999999999999996653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.66  E-value=9.1e-16  Score=146.58  Aligned_cols=97  Identities=19%  Similarity=0.248  Sum_probs=77.8

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEEe
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIYC  233 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh~  233 (437)
                      +.+.+|+||||||+||||++++++|+++|++|++++|+.+  ..+.++ .+.++ +|+  .++++++++   ++|+||||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~-~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE--LLKRSG-HRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH--HHHHTC-SEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH--HHHhhC-CeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            3478999999999999999999999999999999999863  233343 56777 999  445555555   67999999


Q ss_pred             ccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          234 ATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       234 Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                      ||.....         +++.+++|+.|++++++++
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  123 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNY  123 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            9975421         5678999999999998877

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.66  E-value=2.3e-16  Score=153.15  Aligned_cols=102  Identities=23%  Similarity=0.284  Sum_probs=84.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhcc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVENC------  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~------  227 (437)
                      +|+ |++|||||+||||++++++|+++|++|++++|+.+.  +..+.+.  ..+.++.+|++|.++++++++.+      
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            355 899999999999999999999999999999998652  2222222  37889999999999999999864      


Q ss_pred             -cEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHH
Q 013761          228 -NKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       228 -D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~  260 (437)
                       |+||||||+...          .+++++++|+.|++++++++.
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~  141 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLL  141 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence             999999997532          156789999999999999883

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=3.1e-16  Score=150.87  Aligned_cols=102  Identities=20%  Similarity=0.250  Sum_probs=85.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.+     ...+.++.+|++|+++++++++.     
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999998652  111121     23688999999999999998875     


Q ss_pred             --ccEEEEeccCCC-CchhhHHHHHHHHHHHHHHHHH
Q 013761          227 --CNKIIYCATARS-TITGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 --~D~VIh~Ag~~~-~~~~~~~~vNv~gt~~l~~aa~  260 (437)
                        +|+||||||... ..+++.+++|+.|++++++++.
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~  121 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGL  121 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHH
Confidence              599999999864 4588899999999999888873

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.65  E-value=4.6e-16  Score=150.08  Aligned_cols=146  Identities=15%  Similarity=0.101  Sum_probs=106.4

Q ss_pred             CCCCCEEEEECC--CChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhCCCCeEEEEecCCCHHHHHHHHh-------
Q 013761          158 GAQNTTVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------  225 (437)
Q Consensus       158 ~l~~k~vLVTGA--tG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------  225 (437)
                      .|.+|++|||||  +||||++++++|+++|++|++++|+.+.   +..+.++..+.++.+|++|+++++++++       
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            367899999999  9999999999999999999999998753   2233345578899999999999998887       


Q ss_pred             ---cccEEEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCC
Q 013761          226 ---NCNKIIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSAD  288 (437)
Q Consensus       226 ---~~D~VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~s  288 (437)
                         .+|+||||||+...              .+++.+++|+.|++++++++      ++.|...  +       +++..+
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~~~~~--g-------~iv~is  148 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKAL------LPIMNPG--G-------SIVGMD  148 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------GGGEEEE--E-------EEEEEE
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHH------HHhhccC--C-------eEEEEc
Confidence               68999999997541              14568999999999999999      4444321  1       344433


Q ss_pred             CCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          289 SLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       289 sl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +...   .+......|+.+|.+...+......+
T Consensus       149 s~~~---~~~~~~~~Y~asKaa~~~l~~~la~e  178 (269)
T 2h7i_A          149 FDPS---RAMPAYNWMTVAKSALESVNRFVARE  178 (269)
T ss_dssp             CCCS---SCCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cccc---cccCchHHHHHHHHHHHHHHHHHHHH
Confidence            3322   12223456777777766555443333

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.65  E-value=6.1e-16  Score=150.69  Aligned_cols=154  Identities=15%  Similarity=0.148  Sum_probs=104.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC-cH--HHHh----hCCCCeEEEEecCCC----HHHHHHHHh-
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA-DQ--EVVD----MLPRSVEIVLGDVGD----PCTLKAAVE-  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~-~~--~~~~----~~~~~v~~v~~Dltd----~~~v~~a~~-  225 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|+. +.  +..+    ..+..+.++.+|++|    .++++++++ 
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            37789999999999999999999999999999999987 42  1111    234578999999999    999988886 


Q ss_pred             ------cccEEEEeccCCCC---------------c----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhh
Q 013761          226 ------NCNKIIYCATARST---------------I----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLL  280 (437)
Q Consensus       226 ------~~D~VIh~Ag~~~~---------------~----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~  280 (437)
                            .+|+||||||+...               .    +++.+++|+.|++++++++.+      .|....... ...
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~------~~~~~~~~~-~~~  172 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ------RQKGTNPNC-TSS  172 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHH------HC---------CC
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHH------HHhhcCCCC-CCC
Confidence                  46999999997421               1    346899999999999999944      332211000 000


Q ss_pred             hhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhc
Q 013761          281 LAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELS  320 (437)
Q Consensus       281 ~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~  320 (437)
                      ..+++..++.....  |......|..+|.+...+......
T Consensus       173 ~g~iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~  210 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQ--PCMAFSLYNMGKHALVGLTQSAAL  210 (288)
T ss_dssp             CEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecccccC--CCCCCchHHHHHHHHHHHHHHHHH
Confidence            01355555544322  222356688888776655543333

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.65  E-value=3.7e-15  Score=140.72  Aligned_cols=103  Identities=22%  Similarity=0.301  Sum_probs=83.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +++|+||||||+|+||++|+++|+++| ++|++++|+.+. ........+.++.+|++|+++++++++++|+||||||..
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~   99 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK-IHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE   99 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG-SCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh-hcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence            557899999999999999999999999 899999998653 111234578999999999999999999999999999853


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA  271 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~  271 (437)
                      .  .       ...+.++++++++.+++ +..+++
T Consensus       100 ~--~-------~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A          100 D--L-------DIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             T--H-------HHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             c--h-------hHHHHHHHHHHHHcCCCEEEEEec
Confidence            2  1       13456899999998875 555553

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.65  E-value=1.6e-16  Score=151.42  Aligned_cols=93  Identities=16%  Similarity=0.371  Sum_probs=79.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc----cEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC----NKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~----D~VIh~Ag~  236 (437)
                      ||+||||||+||||++++++|+++|++|++++|+.+...     ..   +.+|++|.++++++++.+    |+||||||+
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~---~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----AD---LSTAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CC---TTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----cc---cccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            468999999999999999999999999999999865310     01   568999999999999755    999999998


Q ss_pred             CC--CchhhHHHHHHHHHHHHHHHHHh
Q 013761          237 RS--TITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       237 ~~--~~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ..  ..+++.+++|+.|++++++++.+
T Consensus        73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~   99 (257)
T 1fjh_A           73 GPQTKVLGNVVSVNYFGATELMDAFLP   99 (257)
T ss_dssp             CTTCSSHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHhhHHHHHHHHHHHH
Confidence            64  34788999999999999999854

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.64  E-value=4.8e-16  Score=149.06  Aligned_cols=144  Identities=17%  Similarity=0.102  Sum_probs=100.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---CCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---LPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|+.+.  +..+.   ...++.++.+|++|+++++++++.       
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999998652  11222   245788999999999999887754       


Q ss_pred             -ccEEEEecc--CC-------C-------CchhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCC
Q 013761          227 -CNKIIYCAT--AR-------S-------TITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADS  289 (437)
Q Consensus       227 -~D~VIh~Ag--~~-------~-------~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ss  289 (437)
                       +|+||||||  +.       .       ..++.++++|+.|++++++++.      +.|.....+       +++..++
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~------~~~~~~~~g-------~iv~isS  149 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGA------RLMVPAGQG-------LIVVISS  149 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHH------HHHGGGTCC-------EEEEECC
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHH------HHHhhcCCc-------EEEEEcC
Confidence             499999994  21       1       1156789999999999999883      333221111       3444444


Q ss_pred             CcceeeccCcccchhhhhhhhcccchhhh
Q 013761          290 LNGWEVRQGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       290 l~~~i~rP~~~~~~y~~sk~a~~~~~~~~  318 (437)
                      .....  + .+...|+.+|.+.+.+....
T Consensus       150 ~~~~~--~-~~~~~Y~asK~a~~~~~~~l  175 (260)
T 2qq5_A          150 PGSLQ--Y-MFNVPYGVGKAACDKLAADC  175 (260)
T ss_dssp             GGGTS--C-CSSHHHHHHHHHHHHHHHHH
T ss_pred             hhhcC--C-CCCCchHHHHHHHHHHHHHH
Confidence            33221  1 12345777777666555433

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.64  E-value=4.8e-16  Score=142.95  Aligned_cols=179  Identities=13%  Similarity=0.015  Sum_probs=112.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh---cccEEEEeccC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE---NCNKIIYCATA  236 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~---~~D~VIh~Ag~  236 (437)
                      |++|||||+||||++++++|+++  +|++++|+.+.  ...+.+..  .++.+|++|+++++++++   ++|+||||||.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   76 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEEAGPLDLLVHAVGK   76 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            58999999999999999999998  99999997652  12222222  788999999999999998   79999999997


Q ss_pred             CCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhh
Q 013761          237 RST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAF  307 (437)
Q Consensus       237 ~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~s  307 (437)
                      ...         .+++.+++|+.|++++++++++.+..                 +++..++....  .|......|+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----------------~iv~~sS~~~~--~~~~~~~~Y~~s  137 (207)
T 2yut_A           77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGA-----------------RAVFFGAYPRY--VQVPGFAAYAAA  137 (207)
T ss_dssp             CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEE-----------------EEEEECCCHHH--HSSTTBHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCc-----------------EEEEEcChhhc--cCCCCcchHHHH
Confidence            532         25678999999999999998433321                 12222222111  122234567777


Q ss_pred             hhhcccchhhhhcc---cccceeeeeeeccCcccee-ccccCCCcccHHHHHHHHHHHhc
Q 013761          308 KYDAGMDAKFELSE---TGDAVFSGYVFTRGGYVEL-SKKLSLPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       308 k~a~~~~~~~~~~~---~~~~v~~g~~~~~~G~~~i-~~~~~~p~g~v~D~~~gi~l~~~  363 (437)
                      |...+.+......+   .+..+...++...++.... .........+++|++++++..+.
T Consensus       138 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~dva~~~~~~~~  197 (207)
T 2yut_A          138 KGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKGALSPEEAARKVLEGLF  197 (207)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTSCCTTCBCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCCCCCCCCCHHHHHHHHHHHHh
Confidence            76665555433333   2332222222111111000 00011122368899999888874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.62  E-value=6.4e-16  Score=146.79  Aligned_cols=198  Identities=14%  Similarity=0.044  Sum_probs=112.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHH---HH---hcccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKA---AV---ENCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~---a~---~~~D~VI  231 (437)
                      +++|++|||||+||||++++++|++ |+.|++++|+.+. +.... ...+.++.+|++|.+..+.   .+   ..+|+||
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv   80 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLV   80 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEE
Confidence            6789999999999999999999987 9999999998653 22222 3468899999998755222   22   2469999


Q ss_pred             EeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          232 YCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       232 h~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ||||+....         +++.+++|+.|++++++++      ++.|....        .+++..++.......|  ...
T Consensus        81 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~------~~~~~~~~--------g~iv~isS~~~~~~~~--~~~  144 (245)
T 3e9n_A           81 HAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQL------LPALRAAS--------GCVIYINSGAGNGPHP--GNT  144 (245)
T ss_dssp             ECC----------CHHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHT--------CEEEEEC------------CH
T ss_pred             ECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHhhcC--------CeEEEEcCcccccCCC--Cch
Confidence            999985422         5678999999999999998      33332111        1344444443322222  356


Q ss_pred             hhhhhhhhcccchhhhhccc---ccc---eeeeeeeccCccc--e-ecccc-CCCcccHHHHHHHHHHHhcc--CCcEEE
Q 013761          303 DVVAFKYDAGMDAKFELSET---GDA---VFSGYVFTRGGYV--E-LSKKL-SLPLGCTLDRYEGLVLSVGG--NGRSYV  370 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~---~~~---v~~g~~~~~~G~~--~-i~~~~-~~p~g~v~D~~~gi~l~~~~--~Ge~y~  370 (437)
                      .|+.+|.+.+.+......+.   +..   +.++.+.++....  . ....+ .......+|++++++..+..  .+..|.
T Consensus       145 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~~~~~~~  224 (245)
T 3e9n_A          145 IYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGETTQITN  224 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCCccceee
Confidence            78888887776665444433   222   2233333221100  0 00000 01123578999999888743  355566


Q ss_pred             EEcc
Q 013761          371 LILE  374 (437)
Q Consensus       371 l~l~  374 (437)
                      +.+.
T Consensus       225 i~~~  228 (245)
T 3e9n_A          225 VDVR  228 (245)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            5444

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.61  E-value=6.1e-16  Score=154.05  Aligned_cols=99  Identities=22%  Similarity=0.253  Sum_probs=82.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-----HHHhh------CCCCeEEEEecCCCHHHHHHHHhc---
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-----EVVDM------LPRSVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-----~~~~~------~~~~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      +|+||||||+||||++++++|+++|++|++++|+...     ...+.      ....+.++.+|++|.++++++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            6799999999999999999999999999888875431     11111      135789999999999999999986   


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHH
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa  259 (437)
                        +|+||||||+...         .+++++++|+.|++++++++
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  125 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAF  125 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence              7999999997532         15678999999999999998

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.60  E-value=1.9e-15  Score=150.15  Aligned_cols=146  Identities=18%  Similarity=0.097  Sum_probs=97.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec---------CCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh--
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR---------KADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE--  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R---------~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~--  225 (437)
                      |.+|++|||||+||||++++++|+++|++|++++|         +.+.  ...+.+......+.+|++|.++++++++  
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            78899999999999999999999999999999765         3321  1112221111123589999988877765  


Q ss_pred             -----cccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          226 -----NCNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       226 -----~~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                           .+|+||||||+....         ++..+++|+.|++++++++      ++.|.....+       +++..++..
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------~~~m~~~~~g-------rIV~vsS~~  153 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAA------WDHMKKQNYG-------RIIMTASAS  153 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHTCE-------EEEEECCHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------EEEEECChh
Confidence                 469999999975431         5678999999999999998      4444322111       344444433


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhh
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFEL  319 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~  319 (437)
                      .....|  ....|+.+|.+...+.....
T Consensus       154 ~~~~~~--~~~~Y~aSK~a~~~~~~~la  179 (319)
T 1gz6_A          154 GIYGNF--GQANYSAAKLGLLGLANTLV  179 (319)
T ss_dssp             HHHCCT--TCHHHHHHHHHHHHHHHHHH
T ss_pred             hccCCC--CCHHHHHHHHHHHHHHHHHH
Confidence            222222  24568888877666554433

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.60  E-value=4.6e-15  Score=154.40  Aligned_cols=104  Identities=13%  Similarity=0.109  Sum_probs=85.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC--CCCeEEEEecCCCHHHHHHHHh-------c-cc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML--PRSVEIVLGDVGDPCTLKAAVE-------N-CN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~-------~-~D  228 (437)
                      +.+|++|||||+||||+++++.|+++|++|++++|+...+.....  ...+.++.+|++|.++++++++       + +|
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            678999999999999999999999999999999997543221111  1246789999999999998876       2 79


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +||||||+....         ++.++++|+.|++++++++.+.
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~  333 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGN  333 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999986432         5678999999999999999664

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.55  E-value=5.6e-15  Score=159.19  Aligned_cols=150  Identities=16%  Similarity=0.056  Sum_probs=102.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec---------CCc--HHHHhhCCCCeEEEEecCCCHHHHHHHHhc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR---------KAD--QEVVDMLPRSVEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R---------~~~--~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~  226 (437)
                      +|.+|++|||||+||||++++++|+++|++|++++|         +.+  +...+++......+.+|++|.++++++++.
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~   95 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIET   95 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHH
Confidence            478999999999999999999999999999999988         322  111222211111234899999988888864


Q ss_pred             -------ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          227 -------CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       227 -------~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                             +|+||||||+....         |+.++++|+.|++++++++      ++.|.....+       +++..++.
T Consensus        96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~------~p~m~~~~~g-------~IV~isS~  162 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAA------FPYMKKQNYG-------RIIMTSSN  162 (613)
T ss_dssp             ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHTTTCE-------EEEEECCH
T ss_pred             HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHcCCC-------EEEEECCH
Confidence                   59999999985421         5679999999999999999      5566544333       46666655


Q ss_pred             cceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          291 NGWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       291 ~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ......|  ....|+.+|.+...+......+.
T Consensus       163 a~~~~~~--~~~~Y~asKaal~~lt~~la~e~  192 (613)
T 3oml_A          163 SGIYGNF--GQVNYTAAKMGLIGLANTVAIEG  192 (613)
T ss_dssp             HHHHCCT--TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCC--CChHHHHHHHHHHHHHHHHHHHh
Confidence            4433333  35678888887776665444443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.52  E-value=1e-14  Score=139.39  Aligned_cols=139  Identities=12%  Similarity=-0.002  Sum_probs=90.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH--HhhCCCCeEEEEecCCCHHHHHHHHh-------cccE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV--VDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNK  229 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~--~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~  229 (437)
                      ||++|||||+||||++++++|+++|++|++++|+.+.  ..  +......+.++  |..+   ++++++       .+|+
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~---v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQE---PAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCS---HHHHHHHHHHHHSCCCE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHH---HHHHHHHHHHHhCCCCE
Confidence            3689999999999999999999999999999998652  11  11113344443  5444   444433       5799


Q ss_pred             EEEeccCC-CC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATAR-ST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~-~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ||||||+. ..         .+++.+++|+.|++++++++.      +.|.....+       +++..++.......|  
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~------~~~~~~~~g-------~iv~isS~~~~~~~~--  140 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA------SQMKKRKSG-------HIIFITSATPFGPWK--  140 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH------HHHHHHTCC-------EEEEECCSTTTSCCT--
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH------HHHHHcCCc-------EEEEECCcccccCCC--
Confidence            99999976 21         156789999999999999983      333221111       344444433322222  


Q ss_pred             ccchhhhhhhhcccchhhhh
Q 013761          300 YFQDVVAFKYDAGMDAKFEL  319 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~  319 (437)
                      ....|..+|.+.+.+.....
T Consensus       141 ~~~~Y~~sK~a~~~~~~~la  160 (254)
T 1zmt_A          141 ELSTYTSARAGACTLANALS  160 (254)
T ss_dssp             TCHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHH
Confidence            24567777777665554433

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.51  E-value=1.4e-14  Score=137.67  Aligned_cols=137  Identities=14%  Similarity=0.005  Sum_probs=89.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEE-e--cCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHh-------ccc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-V--RKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~--R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D  228 (437)
                      +|++|||||+||||++++++|+++|++|+++ +  |+.+.  +..+.+ ....     +.|.++++++++       .+|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~~~-----~~~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PGTI-----ALAEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TTEE-----ECCCCCGGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CCCc-----ccCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999999999 6  87652  222333 2222     224444444433       469


Q ss_pred             EEEEeccCCCC------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          229 KIIYCATARST------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       229 ~VIh~Ag~~~~------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      +||||||+...            .+++.+++|+.|++++++++      ++.|.....+       +++..++.......
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~------~~~m~~~~~g-------~iv~isS~~~~~~~  141 (244)
T 1zmo_A           75 TIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSA------IAPLRAAGGA-------SVIFITSSVGKKPL  141 (244)
T ss_dssp             EEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEEECCGGGTSCC
T ss_pred             EEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCc-------EEEEECChhhCCCC
Confidence            99999997543            15668999999999999998      3344322111       34444444332222


Q ss_pred             cCcccchhhhhhhhcccchhhh
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFE  318 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~  318 (437)
                      |  ....|..+|.+.+.+....
T Consensus       142 ~--~~~~Y~asK~a~~~~~~~l  161 (244)
T 1zmo_A          142 A--YNPLYGPARAATVALVESA  161 (244)
T ss_dssp             T--TCTTHHHHHHHHHHHHHHH
T ss_pred             C--CchHHHHHHHHHHHHHHHH
Confidence            2  2456777777766555433

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.49  E-value=1.3e-13  Score=148.31  Aligned_cols=149  Identities=15%  Similarity=0.077  Sum_probs=105.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHH---HhhCCCCeEEEEecC-CCHHHH-HHHH---hcccE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEV---VDMLPRSVEIVLGDV-GDPCTL-KAAV---ENCNK  229 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~---~~~~~~~v~~v~~Dl-td~~~v-~~a~---~~~D~  229 (437)
                      .|++|++|||||++|||+++++.|+++|++|++.+|...++.   +...+..+..+.+|+ ++.+.+ +++.   ..+|+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            478999999999999999999999999999999987543322   223344567777888 554432 2222   24699


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+...         .|+.++++|+.|++++++++      ++.|....+|       ++++.+|..+....|+  
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~p~m~~~~~G-------~IVnisS~ag~~~~~~--  463 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLA------WPYFVEKQFG-------RIINITSTSGIYGNFG--  463 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEEECCHHHHSCCTT--
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------EEEEECChhhccCCCC--
Confidence            9999997532         16779999999999999999      6666544333       5677666654433343  


Q ss_pred             cchhhhhhhhcccchhhhhcc
Q 013761          301 FQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ...|..+|.+...+......+
T Consensus       464 ~~~Y~asKaal~~lt~~la~E  484 (604)
T 2et6_A          464 QANYSSSKAGILGLSKTMAIE  484 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHH
Confidence            457888888766555433333

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.47  E-value=3.8e-13  Score=141.07  Aligned_cols=106  Identities=20%  Similarity=0.246  Sum_probs=88.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcH-----H---HHhhCCCCeEEEEecCCCHHHHHHHHhcc---
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQ-----E---VVDMLPRSVEIVLGDVGDPCTLKAAVENC---  227 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~-----~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~~---  227 (437)
                      .++++|||||+||||+++++.|+++|++ |++++|+...     +   .+...+..+.++.+|++|.+++.++++.+   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999995 9999998641     1   12334567899999999999999999875   


Q ss_pred             ---cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          228 ---NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       228 ---D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                         |+||||||+....         ++.++++|+.|+.++.+++.+.+..
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~  354 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLT  354 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCS
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence               9999999976432         4568899999999999999776654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.46  E-value=5.6e-13  Score=140.62  Aligned_cols=103  Identities=21%  Similarity=0.195  Sum_probs=85.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-----HH---HhhCCCCeEEEEecCCCHHHHHHHHhc--cc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-----EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN--CN  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-----~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D  228 (437)
                      .++++|||||+||||+++++.|+++|+ +|++++|+...     +.   +...+.++.++.+|++|.++++++++.  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            568999999999999999999999999 69999997531     11   223355789999999999999999987  89


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +||||||+....         ++.++++|+.|+.++.+++.+.
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~  380 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI  380 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999986432         4568999999999999988654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.46  E-value=5.1e-14  Score=151.44  Aligned_cols=145  Identities=19%  Similarity=0.116  Sum_probs=100.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC---------cH--HHHhhC---CCCeEEEEecCCCHHHHHHHH
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA---------DQ--EVVDML---PRSVEIVLGDVGDPCTLKAAV  224 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~---------~~--~~~~~~---~~~v~~v~~Dltd~~~v~~a~  224 (437)
                      |.+|+++||||++|||+++++.|+++|++|++.+|+.         +.  +..+++   +..+   .+|++|.+++++++
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v   82 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIV   82 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHH
Confidence            6789999999999999999999999999999998754         21  112222   2222   35777765555444


Q ss_pred             h-------cccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCC
Q 013761          225 E-------NCNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSAD  288 (437)
Q Consensus       225 ~-------~~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~s  288 (437)
                      +       .+|+||||||+...         .|++++++|+.|++++++++      ++.|....+|       ++++.+
T Consensus        83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~------~p~m~~~~~G-------~IVnis  149 (604)
T 2et6_A           83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAA------WPYFQKQKYG-------RIVNTS  149 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHHHHHcCCC-------EEEEEC
Confidence            3       36999999997532         16779999999999999999      6677544333       577777


Q ss_pred             CCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          289 SLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       289 sl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +.......|+  ...|..+|.+...+......+
T Consensus       150 S~ag~~~~~~--~~~Y~asKaal~~lt~~la~E  180 (604)
T 2et6_A          150 SPAGLYGNFG--QANYASAKSALLGFAETLAKE  180 (604)
T ss_dssp             CHHHHHCCTT--BHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHcCCCCC--chHHHHHHHHHHHHHHHHHHH
Confidence            6654433343  456888887766655443333

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.45  E-value=1.1e-12  Score=128.12  Aligned_cols=197  Identities=13%  Similarity=0.090  Sum_probs=117.9

Q ss_pred             CCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCc------------HHHHhhCCC-----CeEEEEec------
Q 013761          159 AQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKAD------------QEVVDMLPR-----SVEIVLGD------  213 (437)
Q Consensus       159 l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~------------~~~~~~~~~-----~v~~v~~D------  213 (437)
                      |.+|++|||||+  ||||++++++|+++|++|++++|+..            .+....+..     ....+.+|      
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence            678999999999  99999999999999999999986421            001112211     12444444      


Q ss_pred             --CC----C--------HHHHHHHHh-------cccEEEEeccCCC----C-------chhhHHHHHHHHHHHHHHHHHh
Q 013761          214 --VG----D--------PCTLKAAVE-------NCNKIIYCATARS----T-------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       214 --lt----d--------~~~v~~a~~-------~~D~VIh~Ag~~~----~-------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        ++    |        +++++++++       .+|+||||||+..    .       .+++.+++|+.|++++++++  
T Consensus        86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~--  163 (297)
T 1d7o_A           86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF--  163 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH--
T ss_pred             hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH--
Confidence              22    2        445665554       4699999998642    1       15678999999999999999  


Q ss_pred             cCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcc----ccc---ceeeeeeecc
Q 013761          262 FNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE----TGD---AVFSGYVFTR  334 (437)
Q Consensus       262 ~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~----~~~---~v~~g~~~~~  334 (437)
                          ++.|...  +       +++..++.......|+ ....|+.+|.+...+......+    .+.   .+.++.+.++
T Consensus       164 ----~~~m~~~--g-------~iv~isS~~~~~~~~~-~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~  229 (297)
T 1d7o_A          164 ----LPIMNPG--G-------ASISLTYIASERIIPG-YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR  229 (297)
T ss_dssp             ----GGGEEEE--E-------EEEEEECGGGTSCCTT-CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred             ----HHHhccC--c-------eEEEEeccccccCCCC-cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccc
Confidence                5555321  1       3555454433322332 1146888888877666444333    233   3444444443


Q ss_pred             Cccc----e-e----ccccC-CCcccHHHHHHHHHHHhc-----cCCcEEEE
Q 013761          335 GGYV----E-L----SKKLS-LPLGCTLDRYEGLVLSVG-----GNGRSYVL  371 (437)
Q Consensus       335 ~G~~----~-i----~~~~~-~p~g~v~D~~~gi~l~~~-----~~Ge~y~l  371 (437)
                      ....    . .    ..... ...+..+|+++.++..+.     -.|+.+.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~v  281 (297)
T 1d7o_A          230 AAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYV  281 (297)
T ss_dssp             CSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             hhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            2110    0 0    00011 112467888888876663     24676666

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.43  E-value=5.8e-13  Score=139.94  Aligned_cols=106  Identities=23%  Similarity=0.276  Sum_probs=87.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc-----HH---HHhhCCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD-----QE---VVDMLPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~-----~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      +++++|||||+||||+++++.|+++|+ +|++++|+..     .+   .+...+..+.++.+|++|.++++++++.    
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            358999999999999999999999998 7888888642     11   1233466899999999999999999975    


Q ss_pred             --ccEEEEeccCC-CCc---------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          227 --CNKIIYCATAR-STI---------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       227 --~D~VIh~Ag~~-~~~---------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                        +|+||||||+. ...         ++.++++|+.|++++.+++.+.+..
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~  368 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLD  368 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCS
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence              59999999986 221         4678999999999999999766543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.41  E-value=3.8e-13  Score=133.68  Aligned_cols=142  Identities=11%  Similarity=0.067  Sum_probs=100.4

Q ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCc-------------HHHHhhC----CCCeEEEEecCCCH--H-
Q 013761          161 NTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKAD-------------QEVVDML----PRSVEIVLGDVGDP--C-  218 (437)
Q Consensus       161 ~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~-------------~~~~~~~----~~~v~~v~~Dltd~--~-  218 (437)
                      +|++|||||++  |||++++++|+++|++|++.+|+..             .......    ...+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            68999999985  9999999999999999998776541             0000001    12367889999887  7 


Q ss_pred             -----------------HHHHHHhc-------ccEEEEeccCCC---C--------chhhHHHHHHHHHHHHHHHHHhcC
Q 013761          219 -----------------TLKAAVEN-------CNKIIYCATARS---T--------ITGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       219 -----------------~v~~a~~~-------~D~VIh~Ag~~~---~--------~~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                                       +++++++.       +|+||||||+..   .        .+++++++|+.|++++++++    
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~----  157 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYF----  157 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH----
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH----
Confidence                             77777654       599999999742   1        15679999999999999999    


Q ss_pred             CceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc-hhhhhhhhcccchhhhh
Q 013761          264 NKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ-DVVAFKYDAGMDAKFEL  319 (437)
Q Consensus       264 vkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~-~y~~sk~a~~~~~~~~~  319 (437)
                        ++.|..+  +       +++..++.......|+  .. .|..+|.+...+.....
T Consensus       158 --~p~m~~~--g-------~Iv~isS~~~~~~~~~--~~~~Y~asKaal~~~~~~la  201 (329)
T 3lt0_A          158 --VNIMKPQ--S-------SIISLTYHASQKVVPG--YGGGMSSAKAALESDTRVLA  201 (329)
T ss_dssp             --GGGEEEE--E-------EEEEEECGGGTSCCTT--CTTTHHHHHHHHHHHHHHHH
T ss_pred             --HHHHhhC--C-------eEEEEeCccccCCCCc--chHHHHHHHHHHHHHHHHHH
Confidence              6666542  1       4666665544433333  33 78888887766654333

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.41  E-value=5e-13  Score=141.45  Aligned_cols=104  Identities=13%  Similarity=0.155  Sum_probs=84.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEE-ecCC-------------c--HHH---HhhCCCCeEEEEecCCCHHH
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYS-VKAL-VRKA-------------D--QEV---VDMLPRSVEIVLGDVGDPCT  219 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~-~R~~-------------~--~~~---~~~~~~~v~~v~~Dltd~~~  219 (437)
                      .++++|||||+||||+++++.|+++|++ |+++ +|+.             +  .+.   +...+..+.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5789999999999999999999999997 5666 7873             1  111   22235678999999999999


Q ss_pred             HHHHHhc------ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          220 LKAAVEN------CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       220 v~~a~~~------~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      ++++++.      +|+||||||+....         ++.++++|+.|++++.+++....
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~  388 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAA  388 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999986      49999999985432         56789999999999999997654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.39  E-value=1.1e-12  Score=133.53  Aligned_cols=78  Identities=14%  Similarity=0.160  Sum_probs=64.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecCCcH-----------------HHHhhCCCCeEEEEecCCCHHHHH
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLML-RGYSVKALVRKADQ-----------------EVVDMLPRSVEIVLGDVGDPCTLK  221 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~~R~~~~-----------------~~~~~~~~~v~~v~~Dltd~~~v~  221 (437)
                      .+|++|||||++|||+++++.|++ .|++|++++|+.+.                 +.....+..+..+.+|++|+++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            578999999999999999999999 99999999886431                 012234557888999999999998


Q ss_pred             HHHhc-------ccEEEEeccCC
Q 013761          222 AAVEN-------CNKIIYCATAR  237 (437)
Q Consensus       222 ~a~~~-------~D~VIh~Ag~~  237 (437)
                      ++++.       +|+||||||..
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCS
T ss_pred             HHHHHHHHHcCCCCEEEEcCccc
Confidence            88864       49999999973

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.38  E-value=8.1e-13  Score=130.34  Aligned_cols=145  Identities=15%  Similarity=0.086  Sum_probs=94.3

Q ss_pred             CCCCEEEEECC--CChHHHHHHHHHHHCCCeEEEEecCCc------------HHHHhhCCCC-----eEEEEecC-----
Q 013761          159 AQNTTVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKAD------------QEVVDMLPRS-----VEIVLGDV-----  214 (437)
Q Consensus       159 l~~k~vLVTGA--tG~IG~~la~~Ll~~G~~V~~~~R~~~------------~~~~~~~~~~-----v~~v~~Dl-----  214 (437)
                      |.+|++|||||  +||||++++++|+++|++|++++|+..            .+....+...     +.++.+|+     
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            67899999999  899999999999999999999987531            0111222111     24444443     


Q ss_pred             -------CC--------HHHHHHHHh-------cccEEEEeccCCC---C--------chhhHHHHHHHHHHHHHHHHHh
Q 013761          215 -------GD--------PCTLKAAVE-------NCNKIIYCATARS---T--------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       215 -------td--------~~~v~~a~~-------~~D~VIh~Ag~~~---~--------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                             +|        .++++++++       .+|+||||||+..   .        .|++.+++|+.|++++++++  
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~--  164 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF--  164 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH--
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH--
Confidence                   32        445666554       4699999999642   1        15678999999999999999  


Q ss_pred             cCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhh
Q 013761          262 FNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFEL  319 (437)
Q Consensus       262 ~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~  319 (437)
                          ++.|...  +       +++..++.......|+ +...|+.+|.+...+.....
T Consensus       165 ----~~~m~~~--g-------~Iv~isS~~~~~~~~~-~~~~Y~asKaal~~l~~~la  208 (315)
T 2o2s_A          165 ----GPIMNEG--G-------SAVTLSYLAAERVVPG-YGGGMSSAKAALESDTRTLA  208 (315)
T ss_dssp             ----STTEEEE--E-------EEEEEEEGGGTSCCTT-CCTTHHHHHHHHHHHHHHHH
T ss_pred             ----HHHHhcC--C-------EEEEEecccccccCCC-ccHHHHHHHHHHHHHHHHHH
Confidence                5555421  1       3444444333222232 11368888887766654433

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.34  E-value=7.9e-13  Score=135.52  Aligned_cols=77  Identities=16%  Similarity=0.159  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecCCcH-----------------HHHhhCCCCeEEEEecCCCHHHHH
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLML-RGYSVKALVRKADQ-----------------EVVDMLPRSVEIVLGDVGDPCTLK  221 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~~R~~~~-----------------~~~~~~~~~v~~v~~Dltd~~~v~  221 (437)
                      .+|++|||||++|||+++++.|++ .|++|++++|+.+.                 +.....+..+..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            378999999999999999999999 99999999987541                 122334567889999999999988


Q ss_pred             HHHh--------cccEEEEeccC
Q 013761          222 AAVE--------NCNKIIYCATA  236 (437)
Q Consensus       222 ~a~~--------~~D~VIh~Ag~  236 (437)
                      ++++        .+|+||||||.
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHcCCCCCEEEEcCcc
Confidence            7765        35999999986

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.34  E-value=6.7e-12  Score=147.05  Aligned_cols=142  Identities=15%  Similarity=0.092  Sum_probs=102.0

Q ss_pred             CCCCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEe-cCCcH--HHH----hhC---CCCeEEEEecCCCHHHHHHHHh-
Q 013761          158 GAQNTTVLVVGATSR-IGRIVIRKLMLRGYSVKALV-RKADQ--EVV----DML---PRSVEIVLGDVGDPCTLKAAVE-  225 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~-IG~~la~~Ll~~G~~V~~~~-R~~~~--~~~----~~~---~~~v~~v~~Dltd~~~v~~a~~-  225 (437)
                      +|.+|++|||||++| ||+++++.|+++|++|++++ |+.+.  +..    ..+   +..+.++.+|++|.++++++++ 
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            378899999999998 99999999999999999985 55432  111    111   4468899999999999998875 


Q ss_pred             ------------cccEEEEeccCCCCc------------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhh
Q 013761          226 ------------NCNKIIYCATARSTI------------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLL  281 (437)
Q Consensus       226 ------------~~D~VIh~Ag~~~~~------------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~  281 (437)
                                  .+|+||||||+....            ++.++++|+.|+++++++++..    +.|.....+      
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~l----p~m~~~~~G------  821 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA----RGIETRPAQ------  821 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHT----TTCCSCCEE------
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhh----hhhhhCCCC------
Confidence                        479999999975321            4568999999999999987442    223222111      


Q ss_pred             hhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          282 AKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       282 ~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                       .++..++.....  +  ....|+.+|.+...+
T Consensus       822 -~IVnISS~ag~~--g--g~~aYaASKAAL~~L  849 (1887)
T 2uv8_A          822 -VILPMSPNHGTF--G--GDGMYSESKLSLETL  849 (1887)
T ss_dssp             -EEEEECSCTTCS--S--CBTTHHHHHHHGGGH
T ss_pred             -EEEEEcChHhcc--C--CCchHHHHHHHHHHH
Confidence             355555544322  2  245688888877766

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.34  E-value=1.6e-12  Score=128.39  Aligned_cols=143  Identities=15%  Similarity=0.115  Sum_probs=81.6

Q ss_pred             CCCCEEEEECC--CChHHHHHHHHHHHCCCeEEEEecCC-----------cH-H------------HHhhCCC------C
Q 013761          159 AQNTTVLVVGA--TSRIGRIVIRKLMLRGYSVKALVRKA-----------DQ-E------------VVDMLPR------S  206 (437)
Q Consensus       159 l~~k~vLVTGA--tG~IG~~la~~Ll~~G~~V~~~~R~~-----------~~-~------------~~~~~~~------~  206 (437)
                      |.+|++|||||  ++|||++++++|+++|++|++++|+.           +. +            ..+++..      .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            67899999999  89999999999999999999998642           10 0            0011100      0


Q ss_pred             eEEEEecC------------CC--------HHHHHHHHh-------cccEEEEeccCCC---C--------chhhHHHHH
Q 013761          207 VEIVLGDV------------GD--------PCTLKAAVE-------NCNKIIYCATARS---T--------ITGDLFRVD  248 (437)
Q Consensus       207 v~~v~~Dl------------td--------~~~v~~a~~-------~~D~VIh~Ag~~~---~--------~~~~~~~vN  248 (437)
                      ..++.+|+            +|        .++++++++       .+|+||||||+..   .        .|++.+++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            24444443            22        335665554       4699999999642   1        156789999


Q ss_pred             HHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhh
Q 013761          249 YQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       249 v~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~  317 (437)
                      +.|++++++++      ++.|...  +       +++..++.......|+ ....|+.+|.+...+...
T Consensus       167 ~~g~~~l~~~~------~~~m~~~--g-------~Iv~isS~~~~~~~~~-~~~~Y~asKaal~~l~~~  219 (319)
T 2ptg_A          167 SYSFVSLLQHF------LPLMKEG--G-------SALALSYIASEKVIPG-YGGGMSSAKAALESDCRT  219 (319)
T ss_dssp             THHHHHHHHHH------GGGEEEE--E-------EEEEEEECC-------------------THHHHHH
T ss_pred             hHHHHHHHHHH------HHHHhcC--c-------eEEEEeccccccccCc-cchhhHHHHHHHHHHHHH
Confidence            99999999999      5555321  1       3454444433222232 113577777766655543

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.33  E-value=3e-12  Score=146.05  Aligned_cols=141  Identities=16%  Similarity=0.105  Sum_probs=99.8

Q ss_pred             CCCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEE-ecCCcH--HHHhhC-------CCCeEEEEecCCCHHHHHHHHh--
Q 013761          159 AQNTTVLVVGATSR-IGRIVIRKLMLRGYSVKAL-VRKADQ--EVVDML-------PRSVEIVLGDVGDPCTLKAAVE--  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~-IG~~la~~Ll~~G~~V~~~-~R~~~~--~~~~~~-------~~~v~~v~~Dltd~~~v~~a~~--  225 (437)
                      |++|++|||||+|| ||+++++.|+++|++|+++ +|+.+.  +..+.+       +..+.++.+|++|.++++++++  
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            67899999999998 9999999999999999998 455431  122222       3468899999999999988874  


Q ss_pred             -----------cccEEEEeccCCCCc------------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhh
Q 013761          226 -----------NCNKIIYCATARSTI------------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLA  282 (437)
Q Consensus       226 -----------~~D~VIh~Ag~~~~~------------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~  282 (437)
                                 .+|+||||||+....            +++++++|+.|+++++++++.    ++.|.....+       
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~----lp~M~krggG-------  622 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKS----ARGIETRPAQ-------  622 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHH----HHTCTTSCEE-------
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHh----ChHHHhCCCC-------
Confidence                       379999999974321            456899999999999998843    1222222111       


Q ss_pred             hhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          283 KFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       283 k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                      .++..++.....  +  ....|+.+|.+...+
T Consensus       623 rIVnISSiAG~~--G--g~saYaASKAAL~aL  650 (1688)
T 2pff_A          623 VILPMSPNHGTF--G--GDGMYSESKLSLETL  650 (1688)
T ss_dssp             ECCCCCSCTTTS--S--CBTTHHHHHHHHTHH
T ss_pred             EEEEEEChHhcc--C--CchHHHHHHHHHHHH
Confidence            355555543322  1  235677777766655

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.31  E-value=2.1e-12  Score=128.44  Aligned_cols=160  Identities=14%  Similarity=0.114  Sum_probs=103.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCc-H--HH-HhhC-CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKAD-Q--EV-VDML-PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~-~--~~-~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      .|+|+||||+||||++++..|+.+|+       +|+++|+... .  .. ...+ ...+.++ +|+.+.+++.++++++|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence            36899999999999999999999996       8999998642 1  10 1111 1112233 68877777888999999


Q ss_pred             EEEEeccCCCC---chhhHHHHHHHHHHHHHHHHHhcC-Cc--eeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          229 KIIYCATARST---ITGDLFRVDYQGVYNVTKAFQDFN-NK--LAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       229 ~VIh~Ag~~~~---~~~~~~~vNv~gt~~l~~aa~~~g-vk--l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      +|||+||....   ...+++++|+.++.++++++++++ ++  +...+. ......+    +..+....   ..|   ..
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~sn-p~~~~~~----~~~~~~~~---~~p---~~  151 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN-PANTNAL----IAYKNAPG---LNP---RN  151 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS-SHHHHHH----HHHHTCTT---SCG---GG
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCC-chhhhHH----HHHHHcCC---CCh---hh
Confidence            99999997643   246789999999999999999986 54  333321 1100001    11111100   112   24


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeee
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVF  332 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~  332 (437)
                      .|+.+|+..+.........++......+.+
T Consensus       152 ~yg~tkl~~er~~~~~a~~~g~~~~~vr~~  181 (327)
T 1y7t_A          152 FTAMTRLDHNRAKAQLAKKTGTGVDRIRRM  181 (327)
T ss_dssp             EEECCHHHHHHHHHHHHHHHTCCGGGEECC
T ss_pred             eeccchHHHHHHHHHHHHHhCcChhheeee
Confidence            477788877776655555556544444433

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.29  E-value=2e-11  Score=142.86  Aligned_cols=142  Identities=14%  Similarity=0.066  Sum_probs=101.2

Q ss_pred             CCCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecC-CcH--HHH----hhC---CCCeEEEEecCCCHHHHHHHHh--
Q 013761          159 AQNTTVLVVGATSR-IGRIVIRKLMLRGYSVKALVRK-ADQ--EVV----DML---PRSVEIVLGDVGDPCTLKAAVE--  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~-IG~~la~~Ll~~G~~V~~~~R~-~~~--~~~----~~~---~~~v~~v~~Dltd~~~v~~a~~--  225 (437)
                      |.+|++|||||+|| ||+++++.|+++|++|++++++ .+.  +..    ..+   +..+.++.+|++|.++++++++  
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            67899999999999 9999999999999999999644 331  111    222   4568899999999999998875  


Q ss_pred             ---------cccEEEEeccCCCCc------------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhh
Q 013761          226 ---------NCNKIIYCATARSTI------------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKF  284 (437)
Q Consensus       226 ---------~~D~VIh~Ag~~~~~------------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~  284 (437)
                               .+|+||||||+....            ++.++++|+.|+++++++++.    ++.|.....+       .+
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~----lp~M~~~~~G-------~I  798 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKK----ERGYETRPAQ-------VI  798 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHH----HHTCCSCCEE-------EC
T ss_pred             HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHH----hHHHHhCCCC-------EE
Confidence                     479999999975321            456899999999999987432    2233222111       45


Q ss_pred             ccCCCCcceeeccCcccchhhhhhhhcccch
Q 013761          285 KSADSLNGWEVRQGTYFQDVVAFKYDAGMDA  315 (437)
Q Consensus       285 v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~  315 (437)
                      +..+++....  ++  ...|+.+|.+...+.
T Consensus       799 VnISS~ag~~--gg--~~aYaASKAAL~aLt  825 (1878)
T 2uv9_A          799 LPLSPNHGTF--GN--DGLYSESKLALETLF  825 (1878)
T ss_dssp             CEECSCSSSS--SC--CSSHHHHHHHHTTHH
T ss_pred             EEEcchhhcc--CC--chHHHHHHHHHHHHH
Confidence            5555554322  22  456888888776654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.28  E-value=5.5e-12  Score=129.65  Aligned_cols=150  Identities=11%  Similarity=-0.036  Sum_probs=101.1

Q ss_pred             CCCCEEEEECCCChHHHH--HHHHHHHCCCeEEEEecCCcH-------------H----HHhhCCCCeEEEEecCCCHHH
Q 013761          159 AQNTTVLVVGATSRIGRI--VIRKLMLRGYSVKALVRKADQ-------------E----VVDMLPRSVEIVLGDVGDPCT  219 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~--la~~Ll~~G~~V~~~~R~~~~-------------~----~~~~~~~~v~~v~~Dltd~~~  219 (437)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+...             +    .....+..+.++.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            468999999999999999  999999999999999986431             1    122345678899999999999


Q ss_pred             HHHHHhc-------ccEEEEeccCC-------------C------------------------------CchhhHHHHHH
Q 013761          220 LKAAVEN-------CNKIIYCATAR-------------S------------------------------TITGDLFRVDY  249 (437)
Q Consensus       220 v~~a~~~-------~D~VIh~Ag~~-------------~------------------------------~~~~~~~~vNv  249 (437)
                      ++++++.       +|+||||||..             .                              ..++..+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9988864       49999999973             0                              01345777777


Q ss_pred             HHHH-HHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          250 QGVY-NVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       250 ~gt~-~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      .+.+ .+++++...+..     .. .+       ++++.+++......|......|+.+|.+...++.....+
T Consensus       218 ~~~~~~~~~~l~~~~~~-----~~-gg-------~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~E  277 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCF-----SD-KA-------TTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEK  277 (418)
T ss_dssp             SHHHHHHHHHHHHTTCE-----EE-EE-------EEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhh-----cC-Cc-------EEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence            7776 667776443321     10 11       344445444333344422267888887766655444333

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.20  E-value=1.8e-11  Score=135.40  Aligned_cols=100  Identities=24%  Similarity=0.319  Sum_probs=83.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-eEEEEecCCc-----HHH---HhhCCCCeEEEEecCCCHHHHHHHHhcc--
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLM-LRGY-SVKALVRKAD-----QEV---VDMLPRSVEIVLGDVGDPCTLKAAVENC--  227 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll-~~G~-~V~~~~R~~~-----~~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~~--  227 (437)
                      .++++|||||+||||+++++.|+ ++|+ +|++++|+..     .+.   ++..+..+.++.||++|.++++++++.+  
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999999999 7998 5999999832     112   2234567899999999999999999764  


Q ss_pred             ----cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          228 ----NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       228 ----D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                          |+||||||+....         |+..+++|+.|++++.+++
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~  653 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI  653 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                9999999986432         5678999999999999988

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.13  E-value=4.4e-10  Score=93.35  Aligned_cols=94  Identities=22%  Similarity=0.214  Sum_probs=76.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++++|+|+|+ |++|+++++.|++.| ++|++++|+.+. +...  ...+.++.+|+++.+++.++++++|+|||+++..
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~   80 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--RMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF   80 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--TTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--hCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch
Confidence            4679999999 999999999999999 999999998653 1122  3467889999999999999999999999999532


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCceeee
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNKLAQL  269 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l  269 (437)
                                   ....+++++.+.+++...+
T Consensus        81 -------------~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           81 -------------LTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             -------------GHHHHHHHHHHTTCEEECC
T ss_pred             -------------hhHHHHHHHHHhCCCEEEe
Confidence                         1356888888888775443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.00  E-value=1.1e-09  Score=134.25  Aligned_cols=103  Identities=17%  Similarity=0.192  Sum_probs=82.1

Q ss_pred             CCCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecCCcHH-------HHhhC---CCCeEEEEecCCCHHHHHHHHh--
Q 013761          159 AQNTTVLVVGATSR-IGRIVIRKLMLRGYSVKALVRKADQE-------VVDML---PRSVEIVLGDVGDPCTLKAAVE--  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~-IG~~la~~Ll~~G~~V~~~~R~~~~~-------~~~~~---~~~v~~v~~Dltd~~~v~~a~~--  225 (437)
                      |.+|++|||||++| ||+++++.|+++|++|++++|+.+..       ..+++   +..+.++.+|++|.++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            78999999999999 99999999999999999999986641       11222   3457889999999999988864  


Q ss_pred             ---------cccEEEEeccCC----C----------CchhhH----HHHHHHHHHHHHHHHHh
Q 013761          226 ---------NCNKIIYCATAR----S----------TITGDL----FRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       226 ---------~~D~VIh~Ag~~----~----------~~~~~~----~~vNv~gt~~l~~aa~~  261 (437)
                               .+|+||||||+.    .          ..++..    +++|+.+++.+++++..
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~ 2276 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSK 2276 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                     249999999971    0          113333    89999999999998843

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.99  E-value=4.9e-10  Score=109.16  Aligned_cols=79  Identities=18%  Similarity=0.206  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +.+|+++||||+||||+++++.|++.|++|++++|+.+.  +..+.+.  ..+.++.+|++|.++++++++.+|+|||||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            578999999999999999999999999999999998552  1112211  145678899999999999999999999999


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      |..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.97  E-value=4.4e-10  Score=137.18  Aligned_cols=104  Identities=13%  Similarity=0.162  Sum_probs=80.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcH-----HHHh---hCCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQ-----EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~-----~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      .+|++|||||+||||+++++.|+++|++ |++++|+...     +..+   ..+..+.++.+|++|.++++++++.    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999997 7888887531     1122   2345788899999999999988764    


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcC
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                        +|+||||||+...         .|++.+++|+.|++++.+++....
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~ 2010 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREAC 2010 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHC
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              5999999997532         266789999999999999886643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=6e-08  Score=100.56  Aligned_cols=105  Identities=17%  Similarity=0.170  Sum_probs=77.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      .+++|+|+| +|+||+++++.|++.|++|++++|+.+.. .+...-..+..+.+|++|.+++.++++++|+|||||+...
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~   80 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   80 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence            468999998 79999999999999999999999976531 1111112477889999999999999999999999998643


Q ss_pred             Cc--hhhHHH--HH-------HHHHHHHHHHHHhcCCc
Q 013761          239 TI--TGDLFR--VD-------YQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       239 ~~--~~~~~~--vN-------v~gt~~l~~aa~~~gvk  265 (437)
                      ..  ....++  +|       ...+..++++++++|++
T Consensus        81 ~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           81 HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            21  111122  12       13567899999999976

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.63  E-value=1.1e-07  Score=94.48  Aligned_cols=103  Identities=17%  Similarity=0.180  Sum_probs=78.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHHH---HhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEV---VDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .++|+||||+|++|..++..|+.+|  .+|+++|++.+...   +........+ .+ +.+.+++.++++++|+|||+||
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi~~ag   85 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLIIVPAG   85 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEEEcCC
Confidence            4689999999999999999999999  78999998765211   1111111111 22 3345678889999999999999


Q ss_pred             CCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          236 ARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       236 ~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .....   ..+++.+|+.++..+++++.+++.+
T Consensus        86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~  118 (326)
T 1smk_A           86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPR  118 (326)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            75432   3568999999999999999998876

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.59  E-value=4e-08  Score=97.77  Aligned_cols=104  Identities=13%  Similarity=0.098  Sum_probs=77.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecC----CcH-HH-HhhCCCC-eEEEEecCCCHHHHHHHHhc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRK----ADQ-EV-VDMLPRS-VEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~----~~~-~~-~~~~~~~-v~~v~~Dltd~~~v~~a~~~  226 (437)
                      .++|+||||+|+||++++..|+..|.       +|+++|++    .+. +. ...+... ..+ ..|+....++.+++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence            36899999999999999999999885       89999887    321 10 1111111 111 2466655677889999


Q ss_pred             ccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC-Cc
Q 013761          227 CNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN-NK  265 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g-vk  265 (437)
                      +|+|||+||.....   ..+++..|+.++..+++++.+++ .+
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~  126 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRN  126 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999976432   35688999999999999999985 65

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.59  E-value=1.4e-07  Score=89.03  Aligned_cols=75  Identities=20%  Similarity=0.269  Sum_probs=58.3

Q ss_pred             CCCCCEEEEECC----------------CChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHH
Q 013761          158 GAQNTTVLVVGA----------------TSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK  221 (437)
Q Consensus       158 ~l~~k~vLVTGA----------------tG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~  221 (437)
                      +|.+|+||||||                ||+||.+++++|+++|++|++++++...    ..+..+.  .+|+++.+++.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l----~~~~g~~--~~dv~~~~~~~   78 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----PTPPFVK--RVDVMTALEME   78 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----CCCTTEE--EEECCSHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc----ccCCCCe--EEccCcHHHHH
Confidence            478999999999                7999999999999999999999886531    1122333  56888877665


Q ss_pred             HHH----hcccEEEEeccCCC
Q 013761          222 AAV----ENCNKIIYCATARS  238 (437)
Q Consensus       222 ~a~----~~~D~VIh~Ag~~~  238 (437)
                      +.+    ..+|++|||||+..
T Consensus        79 ~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           79 AAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHhcCCCCEEEECCcccC
Confidence            443    45799999999864

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.58  E-value=1.6e-07  Score=95.06  Aligned_cols=79  Identities=15%  Similarity=0.092  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHH-HCCCeEEEEecCCcH-----------------HHHhhCCCCeEEEEecCCCHHHH
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLM-LRGYSVKALVRKADQ-----------------EVVDMLPRSVEIVLGDVGDPCTL  220 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll-~~G~~V~~~~R~~~~-----------------~~~~~~~~~v~~v~~Dltd~~~v  220 (437)
                      +..|++|||||++|||++.+..|+ ..|+.|+++.+..+.                 +..+..+.....+.||++|.+.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457999999999999999999998 689999998875431                 12233466789999999999999


Q ss_pred             HHHHhc-------ccEEEEeccCC
Q 013761          221 KAAVEN-------CNKIIYCATAR  237 (437)
Q Consensus       221 ~~a~~~-------~D~VIh~Ag~~  237 (437)
                      +++++.       +|+|||++|..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence            998875       49999999964

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.55  E-value=1.4e-07  Score=80.70  Aligned_cols=93  Identities=17%  Similarity=0.271  Sum_probs=68.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHH-HhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAA-VENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag~  236 (437)
                      +++++|+|+|+ |++|+.+++.|.+.|++|++++++.+.  .+.+ .....++.+|.+|.+.+.++ ++++|+||++++.
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~--~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK--VNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH--HHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            45678999998 999999999999999999999987542  2222 22456788999998888776 7789999999864


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          237 RSTITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       237 ~~~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .       .+.|.    .+++.+++.+++
T Consensus        81 ~-------~~~~~----~~~~~~~~~~~~   98 (144)
T 2hmt_A           81 N-------IQAST----LTTLLLKELDIP   98 (144)
T ss_dssp             C-------HHHHH----HHHHHHHHTTCS
T ss_pred             c-------hHHHH----HHHHHHHHcCCC
Confidence            1       12332    355666666765

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.54  E-value=1.5e-07  Score=96.22  Aligned_cols=75  Identities=19%  Similarity=0.270  Sum_probs=61.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCcH--HHHhhC----CCCeEEEEecCCCHHHHHHHHhc--ccE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG---YSVKALVRKADQ--EVVDML----PRSVEIVLGDVGDPCTLKAAVEN--CNK  229 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G---~~V~~~~R~~~~--~~~~~~----~~~v~~v~~Dltd~~~v~~a~~~--~D~  229 (437)
                      |++|+|+|| |+||+++++.|++.|   .+|++++|+.+.  ...+.+    ...+..+.+|++|.+++++++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            368999999 999999999999998   489999998763  122222    13588999999999999999998  899


Q ss_pred             EEEeccC
Q 013761          230 IIYCATA  236 (437)
Q Consensus       230 VIh~Ag~  236 (437)
                      |||||+.
T Consensus        80 Vin~ag~   86 (405)
T 4ina_A           80 VLNIALP   86 (405)
T ss_dssp             EEECSCG
T ss_pred             EEECCCc
Confidence            9999985

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.54  E-value=1.8e-07  Score=88.42  Aligned_cols=76  Identities=18%  Similarity=0.308  Sum_probs=55.7

Q ss_pred             CCCEEEEECC----------------CChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHH--
Q 013761          160 QNTTVLVVGA----------------TSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK--  221 (437)
Q Consensus       160 ~~k~vLVTGA----------------tG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~--  221 (437)
                      .||+||||||                ||++|.++|++|+.+|++|+++.|.....  ...+..+.+  .|+...+++.  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~--~~~~~~~~~--~~v~s~~em~~~   77 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK--PEPHPNLSI--REITNTKDLLIE   77 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC--CCCCTTEEE--EECCSHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--ccCCCCeEE--EEHhHHHHHHHH
Confidence            4789999999                99999999999999999999999975421  011234444  4666654443  


Q ss_pred             --HHHhcccEEEEeccCCCC
Q 013761          222 --AAVENCNKIIYCATARST  239 (437)
Q Consensus       222 --~a~~~~D~VIh~Ag~~~~  239 (437)
                        +.+..+|++|||||+...
T Consensus        78 v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           78 MQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHGGGCSEEEECSBCCSE
T ss_pred             HHHhcCCCCEEEEcCccccc
Confidence              344567999999998653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.43  E-value=3.2e-07  Score=79.04  Aligned_cols=74  Identities=18%  Similarity=0.334  Sum_probs=59.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      +.+++++|+|+ |.+|+++++.|.+.|++|++++++++. +....  ..+.++.+|.+|++.++++ ++++|+||.+.+
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED--EGFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--CCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            34678999998 999999999999999999999998653 12222  3578899999999988876 457899998775

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.42  E-value=8.8e-07  Score=87.42  Aligned_cols=99  Identities=14%  Similarity=0.152  Sum_probs=71.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEec--CCcH-HH----Hhh---C-CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVR--KADQ-EV----VDM---L-PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R--~~~~-~~----~~~---~-~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      |+|+||||+|+||++++..|+..|.  ++.++|+  +.+. +.    +..   . +..+.+...|    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            4899999999999999999998884  6888887  4321 10    111   1 1222333221    23566789999


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +|||+||.....   ..+++.+|+.++.++++++++++ +
T Consensus        77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~  115 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-D  115 (313)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence            999999976432   34689999999999999999988 6

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.34  E-value=1.7e-06  Score=75.71  Aligned_cols=75  Identities=23%  Similarity=0.405  Sum_probs=61.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      ..++++|.|+ |.+|+.+++.|.+.|++|++++++.++   ........++.++.+|.+|++.+.++ ++++|+||.+.+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            3568999986 999999999999999999999997531   12222345688999999999999887 889999998764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.33  E-value=6.1e-07  Score=88.19  Aligned_cols=97  Identities=16%  Similarity=0.157  Sum_probs=71.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEec--CCcH-HH----Hhh---CCCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVR--KADQ-EV----VDM---LPRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R--~~~~-~~----~~~---~~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      ++|+||||+|++|.+++..|+..|.  +++++|+  +.+. +.    +..   ....+.+.. |  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            4899999999999999999999885  6888888  4321 00    000   122333333 2  2    356889999


Q ss_pred             EEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          230 IIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       230 VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |||+||.....   ..+++.+|+.++..+++++.+++.+
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~  112 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDD  112 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999975432   3468899999999999999998865

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.31  E-value=8.7e-07  Score=92.27  Aligned_cols=105  Identities=13%  Similarity=0.159  Sum_probs=75.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++|+|+|| |++|+++++.|++. |++|++++|+.+. +.+... ..+.++.+|+.|.+++.++++++|+|||+++.
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-SGSKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-GTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-cCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            56789999997 99999999999998 7899999998653 122111 24677889999999999999999999999986


Q ss_pred             CCCc--hhh-------HHHHHH--HHHHHHHHHHHhcCCc
Q 013761          237 RSTI--TGD-------LFRVDY--QGVYNVTKAFQDFNNK  265 (437)
Q Consensus       237 ~~~~--~~~-------~~~vNv--~gt~~l~~aa~~~gvk  265 (437)
                      ....  ...       +++++.  ..+..+++++++.|+.
T Consensus        99 ~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~  138 (467)
T 2axq_A           99 TFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGIT  138 (467)
T ss_dssp             GGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCE
T ss_pred             hhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCE
Confidence            4221  011       111111  2346777888888865

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.26  E-value=2.6e-06  Score=85.62  Aligned_cols=89  Identities=16%  Similarity=0.154  Sum_probs=69.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      .|+|+|.|| |++|+.+++.|. +.++|.+.+|+.+.  ++.+...+..+.+|+.|.+++.++++++|+||++++...  
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~--~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~--   89 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNEN--LEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL--   89 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHH--HHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG--
T ss_pred             ccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHH--HHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc--
Confidence            357999998 999999998875 46899999997653  223344677888999999999999999999999986421  


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          241 TGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       241 ~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                                 ...++++|.++|+++
T Consensus        90 -----------~~~v~~~~~~~g~~y  104 (365)
T 3abi_A           90 -----------GFKSIKAAIKSKVDM  104 (365)
T ss_dssp             -----------HHHHHHHHHHHTCEE
T ss_pred             -----------cchHHHHHHhcCcce
Confidence                       135777787777653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.22  E-value=2.3e-06  Score=77.79  Aligned_cols=73  Identities=15%  Similarity=0.194  Sum_probs=53.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~  233 (437)
                      .+++|+||||+|+||.++++.+...|++|++++|+.+. +....++..   ...|..+.+..+.+.+     ++|+||+|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  114 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVE---YVGDSRSVDFADEILELTDGYGVDVVLNS  114 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCS---EEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC---EEeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence            46899999999999999999999999999999997653 223333322   1247776554444332     47999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       115 ~g  116 (198)
T 1pqw_A          115 LA  116 (198)
T ss_dssp             CC
T ss_pred             Cc
Confidence            97

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.21  E-value=3e-06  Score=71.98  Aligned_cols=73  Identities=18%  Similarity=0.277  Sum_probs=56.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      +|+|+|+|+ |.+|+.+++.|.+.|++|++++|+.+. +.... ...+.++.+|.++.+.+.++ ++++|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA-EIDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-hcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            468999987 999999999999999999999997652 11111 11466788999998887765 678899999974

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.07  E-value=9.6e-06  Score=81.70  Aligned_cols=77  Identities=17%  Similarity=0.289  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +.+.+++|+|+|+ |+||+.+++.|...|++|++++|+.+. + ..+..+..   +.+|+++.+++.+++.++|+||+++
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~~  237 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGAV  237 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEECC
Confidence            3467899999999 999999999999999999999998653 1 22224333   4568888899999999999999999


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      +..
T Consensus       238 g~~  240 (369)
T 2eez_A          238 LVP  240 (369)
T ss_dssp             C--
T ss_pred             CCC
Confidence            864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.05  E-value=1.5e-05  Score=69.80  Aligned_cols=74  Identities=20%  Similarity=0.282  Sum_probs=59.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC--CCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML--PRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      ..+++|+|.|+ |.+|+.+++.|.+.|++|++++|+.+.  .+.+  ...+.++.+|..+.+.+.++ ++++|+||.+.+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~--~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYA--FHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG--GGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH--HHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            45689999986 999999999999999999999998653  1222  23466788999998877766 778999999875

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.05  E-value=1.2e-05  Score=79.30  Aligned_cols=102  Identities=20%  Similarity=0.182  Sum_probs=74.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHHHHhhCCCCeEEEEecCCC---HHHHHHHHhcccEEEEeccC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQEVVDMLPRSVEIVLGDVGD---PCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd---~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      |+|.|+||+|++|..++..|+..|  .+|+++|++........+.....  .+++..   .++.+++++++|+||++||.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~~aDvVvi~ag~   78 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET--RATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS--SCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc--CceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence            489999999999999999999888  78999999863211111211110  012211   24567789999999999997


Q ss_pred             CCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          237 RSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       237 ~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ....   ..+.+..|+.....+++.+.++...
T Consensus        79 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~  110 (314)
T 1mld_A           79 PRKPGMTRDDLFNTNATIVATLTAACAQHCPD  110 (314)
T ss_dssp             CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            5432   3567899999999999999887755

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.04  E-value=2.2e-06  Score=85.42  Aligned_cols=101  Identities=15%  Similarity=0.101  Sum_probs=73.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--e-----EEEEecCCcH-----HH--HhhCCCCeEEEEecCCCHHHHHHHHhcc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--S-----VKALVRKADQ-----EV--VDMLPRSVEIVLGDVGDPCTLKAAVENC  227 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~-----V~~~~R~~~~-----~~--~~~~~~~v~~v~~Dltd~~~v~~a~~~~  227 (437)
                      ++|+||||+|+||++++..|+..|.  +     ++++|++...     ..  +........   .++...+...+.++++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~---~~~~~~~~~~~~~~da   80 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL---KDVIATDKEEIAFKDL   80 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE---EEEEEESCHHHHTTTC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc---CCEEEcCCcHHHhCCC
Confidence            5899999999999999999998875  5     9999986421     11  112111111   1222223456789999


Q ss_pred             cEEEEeccCCCC---chhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          228 NKIIYCATARST---ITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       228 D~VIh~Ag~~~~---~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |+||++||....   ...+.++.|+..+..+++++.+++.+
T Consensus        81 DvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~  121 (333)
T 5mdh_A           81 DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKK  121 (333)
T ss_dssp             SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCT
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999997532   24568999999999999999998865

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.97  E-value=1.3e-05  Score=78.85  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=54.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~  233 (437)
                      .+++||||||+|+||..+++.+...|++|++++++.+. +..+.++..   ..+|+++.+++.+.+.     ++|+||+|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD---AAFNYKTVNSLEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS---EEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc---EEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence            57899999999999999999999999999999987652 223444332   2357776333333332     47999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       222 ~g  223 (333)
T 1v3u_A          222 VG  223 (333)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.94  E-value=2.3e-05  Score=77.77  Aligned_cols=74  Identities=18%  Similarity=0.244  Sum_probs=55.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++|+.+. +..+.++..   ...|+++.+++.+.+.     ++|+||++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  245 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE---VFIDFTKEKDIVGAVLKATDGGAHGVINV  245 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC---EEEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc---eEEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence            47899999999999999999999999999999987763 233444332   2248775444444433     58999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       246 ~g~  248 (347)
T 2hcy_A          246 SVS  248 (347)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            973

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.84  E-value=5.2e-05  Score=74.90  Aligned_cols=78  Identities=14%  Similarity=0.198  Sum_probs=59.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC---cH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhcccE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA---DQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~---~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      ++.+++++|+|+ |++|++++..|++.|+ +|+++.|+.   +.  +..+.+.  ..+.+...++.+.+++.+.+.++|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            468899999997 8999999999999998 899999983   31  1111111  1234445678888888889999999


Q ss_pred             EEEeccC
Q 013761          230 IIYCATA  236 (437)
Q Consensus       230 VIh~Ag~  236 (437)
                      |||+-..
T Consensus       230 IINaTp~  236 (315)
T 3tnl_A          230 FTNATGV  236 (315)
T ss_dssp             EEECSST
T ss_pred             EEECccC
Confidence            9998754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.83  E-value=5e-05  Score=65.41  Aligned_cols=72  Identities=21%  Similarity=0.341  Sum_probs=58.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      .++|+|.|+ |.+|+.+++.|.+.|++|++++++++. +....  .++.++.+|.++++.++++ ++++|+||.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--RGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            457999987 999999999999999999999998763 12222  3678899999999988775 567899988764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.83  E-value=2.5e-05  Score=72.31  Aligned_cols=72  Identities=17%  Similarity=0.279  Sum_probs=58.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      |+|+|.|+ |.+|+++++.|.+.|++|++++++++.. .+.. ..++.++.+|.+|.+.++++ ++++|+||-+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK-KLKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-HSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            47999996 9999999999999999999999986631 1111 12577899999999999887 678899997653

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.83  E-value=2.3e-05  Score=76.99  Aligned_cols=73  Identities=11%  Similarity=0.019  Sum_probs=53.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~  233 (437)
                      .+++||||||+|+||..+++.+...|++|++++|+.+. +....++...   ..|..+.+..+++.+     ++|+||+|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~D~vi~~  216 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ---VINYREEDLVERLKEITGGKKVRVVYDS  216 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE---EEECCCccHHHHHHHHhCCCCceEEEEC
Confidence            47899999999999999999999999999999997652 2223333221   247766554444432     47999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       217 ~g  218 (327)
T 1qor_A          217 VG  218 (327)
T ss_dssp             SC
T ss_pred             Cc
Confidence            98

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.79  E-value=4.7e-05  Score=75.85  Aligned_cols=73  Identities=15%  Similarity=0.110  Sum_probs=54.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH---Hh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA---VE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a---~~--~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++|+++. +..+.++..   ...|..+.+..+++   ..  ++|+||+|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~---~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  246 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH---EVFNHREVNYIDKIKKYVGEKGIDIIIEM  246 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS---EEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC---EEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence            47899999999999999999999999999999987653 233444332   12477665444333   32  58999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       247 ~G  248 (351)
T 1yb5_A          247 LA  248 (351)
T ss_dssp             CH
T ss_pred             CC
Confidence            97

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.79  E-value=2.9e-05  Score=76.50  Aligned_cols=74  Identities=14%  Similarity=0.081  Sum_probs=53.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHH---HHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKA---AVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~---a~~--~~D~VIh~  233 (437)
                      .+++||||||+|+||.++++.+...|++|++++|+.+. +....++...   ..|.++.+..++   ...  ++|+||+|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~---~~d~~~~~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH---TINYSTQDFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE---EEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence            46799999999999999999999999999999998642 2233333221   247766543333   332  47999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       222 ~g~  224 (333)
T 1wly_A          222 IGK  224 (333)
T ss_dssp             SCT
T ss_pred             CcH
Confidence            984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.79  E-value=1.9e-05  Score=70.95  Aligned_cols=74  Identities=18%  Similarity=0.280  Sum_probs=59.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH--HhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA--VENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a--~~~~D~VIh~A  234 (437)
                      +.+++|+|.| .|.+|+.+++.|.+. |++|++++++++. +....  ..+.++.+|.+|.+.+.++  ++++|+||.+.
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~--~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~  113 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS--EGRNVISGDATDPDFWERILDTGHVKLVLLAM  113 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH--TTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH--CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence            5577899998 599999999999999 9999999998653 12222  2466788999999888877  77899999876


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      +
T Consensus       114 ~  114 (183)
T 3c85_A          114 P  114 (183)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.76  E-value=2e-05  Score=75.86  Aligned_cols=74  Identities=18%  Similarity=0.230  Sum_probs=51.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++++|+|+ |++|++++..|++.|++|++++|+.+.  +..+.+.....+...|+   +++.+  .++|+|||+++.
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~~  190 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATSS  190 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCSC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCCC
Confidence            57889999998 899999999999999999999998652  22233321101112333   33322  578999999986


Q ss_pred             CC
Q 013761          237 RS  238 (437)
Q Consensus       237 ~~  238 (437)
                      ..
T Consensus       191 ~~  192 (271)
T 1nyt_A          191 GI  192 (271)
T ss_dssp             GG
T ss_pred             CC
Confidence            43

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.75  E-value=4.4e-05  Score=76.09  Aligned_cols=74  Identities=15%  Similarity=0.136  Sum_probs=54.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH---Hh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA---VE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a---~~--~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++|+.+. +..+.++..   ...|..+.+..+++   ..  ++|+||+|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  238 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA---AGFNYKKEDFSEATLKFTKGAGVNLILDC  238 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc---EEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence            47899999999999999999999999999999987653 223333322   22466665444333   32  57999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       239 ~G~  241 (354)
T 2j8z_A          239 IGG  241 (354)
T ss_dssp             SCG
T ss_pred             CCc
Confidence            984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.72  E-value=4.4e-05  Score=75.41  Aligned_cols=73  Identities=15%  Similarity=0.160  Sum_probs=52.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh-hCCCCeEEEEecCCCHHHHHHHH-----hcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD-MLPRSVEIVLGDVGDPCTLKAAV-----ENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~-~~~~~v~~v~~Dltd~~~v~~a~-----~~~D~VIh  232 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +... .++...   ..|..+.+++.+.+     .++|+||+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE---EEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce---EEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            47899999999999999999999999999999987653 2333 444322   24766543333332     25899999


Q ss_pred             ecc
Q 013761          233 CAT  235 (437)
Q Consensus       233 ~Ag  235 (437)
                      |+|
T Consensus       232 ~~g  234 (345)
T 2j3h_A          232 NVG  234 (345)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            997

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.72  E-value=2.8e-05  Score=77.70  Aligned_cols=103  Identities=14%  Similarity=0.101  Sum_probs=72.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH-H--H--HhhCCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ-E--V--VDMLPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~-~--~--~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      |.+++|.|+||+|+||+.++..|+..|  .+|+++|++.+. +  .  +....    +...++.-..+..++++++|+||
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~----~~~~~i~~t~d~~~al~dADvVv   81 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG----FEGLNLTFTSDIKEALTDAKYIV   81 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC----CTTCCCEEESCHHHHHTTEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc----CCCCceEEcCCHHHHhCCCCEEE
Confidence            567899999999999999999999998  489999987541 1  1  11111    00012211234567889999999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .+||....+   ..+.+..|+.-...+++++.++..+
T Consensus        82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~  118 (343)
T 3fi9_A           82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPD  118 (343)
T ss_dssp             ECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999975332   3457899999999999999888764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.71  E-value=6.8e-05  Score=74.58  Aligned_cols=71  Identities=13%  Similarity=0.078  Sum_probs=52.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhh-CCCCeEEEEecCCCHHHHHHHHh----cccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDM-LPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~-~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~A  234 (437)
                      ++||||||+|+||..+++.+...|+ +|++++++.+. +.... ++..   ..+|..+.+..+.+.+    ++|+||+|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~~~~~~~~~~d~vi~~~  238 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD---AAINYKKDNVAEQLRESCPAGVDVYFDNV  238 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS---EEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc---eEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence            8999999999999999999999999 99999997653 22332 4432   2357766443333322    589999999


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      |
T Consensus       239 G  239 (357)
T 2zb4_A          239 G  239 (357)
T ss_dssp             C
T ss_pred             C
Confidence            8

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.69  E-value=8.1e-05  Score=73.29  Aligned_cols=73  Identities=15%  Similarity=0.153  Sum_probs=54.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHH-hhCCCCeEEEEecCCCHHHHHHHHh----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVV-DMLPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~-~~~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +.. +.++...   ..|..+.+..+.+.+    ++|+||+|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~d~vi~~  225 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG---AIDYKNEDLAAGLKRECPKGIDVFFDN  225 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE---EEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE---EEECCCHHHHHHHHHhcCCCceEEEEC
Confidence            57899999999999999999999999999999987653 233 4454322   246666544433332    48999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       226 ~g  227 (336)
T 4b7c_A          226 VG  227 (336)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.57  E-value=8.9e-05  Score=69.22  Aligned_cols=88  Identities=15%  Similarity=0.148  Sum_probs=66.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag~~~  238 (437)
                      .++++|.|+ |.+|+.+++.|.+.|+ |++++++++.. ...   .++.++.+|.+|++.++++ ++++|.||.+.+.  
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~--   81 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKANVRGARAVIVDLES--   81 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSC--
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCC--
Confidence            468999997 9999999999999999 99999887631 222   4688999999999999887 7889999987531  


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                         +   +.|+    .++..+++.+.+
T Consensus        82 ---d---~~n~----~~~~~a~~~~~~   98 (234)
T 2aef_A           82 ---D---SETI----HCILGIRKIDES   98 (234)
T ss_dssp             ---H---HHHH----HHHHHHHHHCSS
T ss_pred             ---c---HHHH----HHHHHHHHHCCC
Confidence               1   3343    355556666654

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.56  E-value=6.1e-05  Score=66.58  Aligned_cols=66  Identities=12%  Similarity=0.082  Sum_probs=51.2

Q ss_pred             ChHHHHHHHHHHHCCCeEEEEecCCcH--------HHHhhCCCCeEEEEecCCCH--HHHHHHHhcc------cEEEEec
Q 013761          171 SRIGRIVIRKLMLRGYSVKALVRKADQ--------EVVDMLPRSVEIVLGDVGDP--CTLKAAVENC------NKIIYCA  234 (437)
Q Consensus       171 G~IG~~la~~Ll~~G~~V~~~~R~~~~--------~~~~~~~~~v~~v~~Dltd~--~~v~~a~~~~------D~VIh~A  234 (437)
                      |.++.++++.|++.|++|++..|+...        +..+..+..+..+.+|++++  ++++++++.+      |+|||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnnA  105 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHCL  105 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEECS
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence            467899999999999999998886431        12233455677788999999  8888877532      9999999


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      |.
T Consensus       106 gg  107 (157)
T 3gxh_A          106 AN  107 (157)
T ss_dssp             BS
T ss_pred             CC
Confidence            85

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.55  E-value=1.1e-05  Score=78.23  Aligned_cols=75  Identities=11%  Similarity=0.114  Sum_probs=51.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCC---eEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRS---VEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~---v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      +.+++++||||+ ++|+++++.|++.| +|++++|+.+.  +..+.+...   ...+.+|+.+.   .+.+.++|+||||
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilVn~  200 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIIINA  200 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEEEC
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEEEC
Confidence            678999999985 99999999999999 99999997652  111111100   00112344432   3445678999999


Q ss_pred             ccCCC
Q 013761          234 ATARS  238 (437)
Q Consensus       234 Ag~~~  238 (437)
                      +|...
T Consensus       201 ag~~~  205 (287)
T 1nvt_A          201 TPIGM  205 (287)
T ss_dssp             SCTTC
T ss_pred             CCCCC
Confidence            98754

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.52  E-value=0.00015  Score=70.82  Aligned_cols=75  Identities=13%  Similarity=0.116  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++|+|+|+ |++|++++..|++.|+ +|++++|+.+.  +..+.+.....    ++.+.+++.+.+.++|+||++.+
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t~  213 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTTS  213 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECSC
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECCC
Confidence            67889999997 8999999999999998 99999998653  22333332110    12234567778888999999998


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      ...
T Consensus       214 ~~~  216 (297)
T 2egg_A          214 VGM  216 (297)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.51  E-value=0.00012  Score=72.53  Aligned_cols=74  Identities=15%  Similarity=0.214  Sum_probs=53.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHH---HHHHHh--cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCT---LKAAVE--NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~---v~~a~~--~~D~VIh  232 (437)
                      .+++||||||+|+||..+++.+... |++|++++++++. +..+.++...   ..|..+.+.   +.++..  ++|+||+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~d~vi~  246 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY---VINASMQDPLAEIRRITESKGVDAVID  246 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCE---EecCCCccHHHHHHHHhcCCCceEEEE
Confidence            4689999999999999999999998 9999999987653 2233333222   236655443   445543  6899999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       247 ~~g~  250 (347)
T 1jvb_A          247 LNNS  250 (347)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.47  E-value=0.00019  Score=70.99  Aligned_cols=73  Identities=19%  Similarity=0.178  Sum_probs=53.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~--~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +....++...   ..|..+.+   .+.++..  ++|+||++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~---~~d~~~~~~~~~~~~~~~~~~~d~vi~~  242 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADE---TVNYTHPDWPKEVRRLTGGKGADKVVDH  242 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE---EEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE---EEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence            46799999999999999999999999999999997653 2233333221   24776643   3333332  57999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       243 ~g  244 (343)
T 2eih_A          243 TG  244 (343)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.47  E-value=0.00019  Score=70.69  Aligned_cols=74  Identities=11%  Similarity=0.124  Sum_probs=53.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHH---HHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCT---LKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~---v~~a~~--~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +..+.++....   .|..+.+.   +.++..  ++|+||+|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~---~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYL---INASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE---EETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE---EeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            47899999999999999999999999999999997653 33444543322   35544433   333332  47999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       225 ~g~  227 (334)
T 3qwb_A          225 VGK  227 (334)
T ss_dssp             CGG
T ss_pred             CCh
Confidence            984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.46  E-value=0.0002  Score=71.26  Aligned_cols=74  Identities=20%  Similarity=0.127  Sum_probs=53.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh----cccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~A  234 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +..+.++...   ..|..+.+..+.+.+    ++|+||+|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---~~~~~~~~~~~~~~~~~~~g~Dvvid~~  243 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKR---GINYRSEDFAAVIKAETGQGVDIILDMI  243 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE---EEeCCchHHHHHHHHHhCCCceEEEECC
Confidence            47899999999999999999999999999999987663 2333343332   235555443333322    579999999


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      |.
T Consensus       244 g~  245 (353)
T 4dup_A          244 GA  245 (353)
T ss_dssp             CG
T ss_pred             CH
Confidence            84

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.46  E-value=0.00034  Score=70.56  Aligned_cols=77  Identities=19%  Similarity=0.210  Sum_probs=59.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHH-hhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVV-DMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~-~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+.+++|+|+|+ |.||+.+++.+...|++|++.+|+.+. +.. +..+..+   ..+..+.+++.+++.++|+||++++
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~~~~  240 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIGAVL  240 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEECCC
Confidence            467899999998 999999999999999999999998653 122 2244333   2344566778888999999999987


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      ...
T Consensus       241 ~p~  243 (377)
T 2vhw_A          241 VPG  243 (377)
T ss_dssp             CTT
T ss_pred             cCC
Confidence            543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.44  E-value=0.00031  Score=69.11  Aligned_cols=66  Identities=23%  Similarity=0.250  Sum_probs=45.7

Q ss_pred             CCCCE-EEEE-CCC-----------------ChHHHHHHHHHHHCCCeEEEEecCCcH-HH---------Hhh------C
Q 013761          159 AQNTT-VLVV-GAT-----------------SRIGRIVIRKLMLRGYSVKALVRKADQ-EV---------VDM------L  203 (437)
Q Consensus       159 l~~k~-vLVT-GAt-----------------G~IG~~la~~Ll~~G~~V~~~~R~~~~-~~---------~~~------~  203 (437)
                      +.|++ |||| |+|                 |-.|.++|++++.+|++|+++.+..+. ..         .+.      .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            56777 9999 556                 789999999999999999999986441 10         010      1


Q ss_pred             CCCeEEEEecCCCHHHHHHHH
Q 013761          204 PRSVEIVLGDVGDPCTLKAAV  224 (437)
Q Consensus       204 ~~~v~~v~~Dltd~~~v~~a~  224 (437)
                      +.++..+..|+...+++.+++
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av  134 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEAL  134 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHH
T ss_pred             ccccceeeeccccHHHHHHHH
Confidence            134556777777666555544

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.43  E-value=7.4e-05  Score=78.70  Aligned_cols=72  Identities=18%  Similarity=0.213  Sum_probs=45.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHH-HHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKA-AVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~-a~~~~D~VIh~A  234 (437)
                      ++.+++++|||| ||+|++++..|++.|++|++++|+.+.  +..+.++..+.    ++.|   +.+ ....+|+||||+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~----~~~d---l~~~~~~~~DilVN~a  432 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL----SLTD---LDNYHPEDGMVLANTT  432 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE----ETTT---TTTC--CCSEEEEECS
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee----eHHH---hhhccccCceEEEECC
Confidence            367889999999 699999999999999999999998652  22333332221    2222   222 123479999999


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      |+.
T Consensus       433 gvg  435 (523)
T 2o7s_A          433 SMG  435 (523)
T ss_dssp             STT
T ss_pred             CCC
Confidence            974

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.41  E-value=6.1e-05  Score=73.23  Aligned_cols=75  Identities=16%  Similarity=0.266  Sum_probs=53.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCC---CCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLP---RSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~---~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++.+++++|+|+ |++|++++..|++.|+ +|++++|+.+.  +..+.+.   ..+.+...++   +++.+.+.++|+||
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVI  199 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVV  199 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEE
Confidence            367899999998 8999999999999998 79999998652  1222211   1223333444   34566788899999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      |+-..
T Consensus       200 naTp~  204 (283)
T 3jyo_A          200 NATPM  204 (283)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            98754

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.40  E-value=0.00017  Score=70.78  Aligned_cols=74  Identities=12%  Similarity=0.097  Sum_probs=53.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHH---HHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLK---AAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~---~a~~--~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++++. +....++...   ..|..+.+..+   +...  ++|+||++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE---TIDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE---EEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            47899999999999999999999999999999987653 2333333222   23555544333   3333  57999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       217 ~g~  219 (325)
T 3jyn_A          217 VGQ  219 (325)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.40  E-value=0.00048  Score=67.86  Aligned_cols=79  Identities=14%  Similarity=0.267  Sum_probs=57.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc---H--HHHhhCC--CCeEEEEecCCCHHHHHHHHhcccE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD---Q--EVVDMLP--RSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~---~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      ++.+++++|+|+ |++|++++..|++.|+ +|+++.|+.+   .  +..+.+.  ....+...++.+.+.+.+.+.++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            467899999997 9999999999999998 8999999833   1  1111111  1233445577676556677888999


Q ss_pred             EEEeccCC
Q 013761          230 IIYCATAR  237 (437)
Q Consensus       230 VIh~Ag~~  237 (437)
                      |||+-...
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99986543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.38  E-value=0.00025  Score=69.95  Aligned_cols=74  Identities=16%  Similarity=0.157  Sum_probs=53.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHH---HHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTL---KAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v---~~a~~--~~D~VIh~  233 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +....++....   .|..+.+..   .+...  ++|+||+|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~---~~~~~~~~~~~~~~~~~~~g~Dvvid~  220 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYV---IDTSTAPLYETVMELTNGIGADAAIDS  220 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE---EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEE---EeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence            47899999999999999999988899999999998763 33344443322   355554333   33332  57999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       221 ~g~  223 (340)
T 3gms_A          221 IGG  223 (340)
T ss_dssp             SCH
T ss_pred             CCC
Confidence            974

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.37  E-value=0.00035  Score=70.04  Aligned_cols=76  Identities=13%  Similarity=0.212  Sum_probs=56.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh-hCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD-MLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~-~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++|+|+|+ |++|+.+++.|...|++|++++|+.+. +... .....+.   .+..+.+++.+.+.++|+||++++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVE---LLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSE---EEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeE---eeeCCHHHHHHHHcCCCEEEECCCc
Confidence            55689999999 999999999999999999999998653 1121 1122222   2223566777888899999999986


Q ss_pred             CC
Q 013761          237 RS  238 (437)
Q Consensus       237 ~~  238 (437)
                      ..
T Consensus       241 ~~  242 (361)
T 1pjc_A          241 PG  242 (361)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.37  E-value=4.9e-05  Score=69.69  Aligned_cols=71  Identities=17%  Similarity=0.239  Sum_probs=48.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      |+|+|+||+|.+|+++++.|++.|++|++++|+.+. + ..+.....+.  ..|+. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            479999999999999999999999999999997652 1 1111110000  01121 1245567788999999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.36  E-value=0.00033  Score=69.28  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=52.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH-HHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP-CTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~-~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +..+.++... ++..+ .+. +.+.++..  ++|+||+++|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g  236 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADI-VLPLE-EGWAKAVREATGGAGVDMVVDPIG  236 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-EEESS-TTHHHHHHHHTTTSCEEEEEESCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE-EecCc-hhHHHHHHHHhCCCCceEEEECCc
Confidence            47899999999999999999999999999999997663 3333443322 22222 222 23334433  4799999998


Q ss_pred             C
Q 013761          236 A  236 (437)
Q Consensus       236 ~  236 (437)
                      .
T Consensus       237 ~  237 (342)
T 4eye_A          237 G  237 (342)
T ss_dssp             -
T ss_pred             h
Confidence            4

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.28  E-value=0.0005  Score=66.57  Aligned_cols=73  Identities=14%  Similarity=0.115  Sum_probs=53.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++++. +..+.++...   ..|..+.+++.+.+.++|+||+ +|.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~---~~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE---AATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE---EEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE---EEECCcchhHHHHhcCceEEEE-CCH
Confidence            46799999999999999999999999999999997653 3334444321   2455551334444478999999 874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.27  E-value=0.00046  Score=68.90  Aligned_cols=73  Identities=14%  Similarity=0.098  Sum_probs=51.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHH---HHHHH-hcccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCT---LKAAV-ENCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~---v~~a~-~~~D~VIh~A  234 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +..+.++... +  .|..+.+.   +.+.. .++|+||+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~--~~~~~~~~~~~~~~~~~~g~D~vid~~  239 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR-P--INYKTEPVGTVLKQEYPEGVDVVYESV  239 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-E--EETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcE-E--EecCChhHHHHHHHhcCCCCCEEEECC
Confidence            47899999999999999999999999999999987653 3344444332 2  34444322   22222 2579999999


Q ss_pred             c
Q 013761          235 T  235 (437)
Q Consensus       235 g  235 (437)
                      |
T Consensus       240 g  240 (362)
T 2c0c_A          240 G  240 (362)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.25  E-value=0.00088  Score=67.02  Aligned_cols=74  Identities=18%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHH--hcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAV--ENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~--~~~D~VIh~Ag~  236 (437)
                      .+.+|||+||+|+||..+++.+...|++|+++++....+..+.++...   ..|..+.+..+++.  .++|+||+++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~---v~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADD---VIDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSE---EEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCE---EEECCchHHHHHHhhcCCCCEEEECCCC
Confidence            578999999999999999999989999999888543333444554332   13555544333333  368999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.19  E-value=0.00017  Score=62.26  Aligned_cols=69  Identities=17%  Similarity=0.293  Sum_probs=50.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +++|+|.|+ |.+|+.+++.|...|++|++.+|+.+.  ...+.++  +...  +.   +++.++++++|+||.+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--~~~~--~~---~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--YEYV--LI---NDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--CEEE--EC---SCHHHHHHTCSEEEECSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--CceE--ee---cCHHHHhcCCCEEEEeCCCC
Confidence            679999996 999999999999999999999998653  1222222  2221  22   33566788999999998754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.18  E-value=0.00065  Score=67.25  Aligned_cols=73  Identities=14%  Similarity=0.239  Sum_probs=52.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh--cccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE--NCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~--~~D~VIh~A  234 (437)
                      +++++|+||+|+||..+++.+...|++|++++++.+. +..+.++...   ..|..+.+   .+.++..  ++|+||+++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~v~~~~~~~g~D~vid~~  241 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAH---VLNEKAPDFEATLREVMKAEQPRIFLDAV  241 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSE---EEETTSTTHHHHHHHHHHHHCCCEEEESS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE---EEECCcHHHHHHHHHHhcCCCCcEEEECC
Confidence            3799999999999999999999999999999987663 3333443322   13544433   3333332  589999999


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      |.
T Consensus       242 g~  243 (349)
T 3pi7_A          242 TG  243 (349)
T ss_dssp             CH
T ss_pred             CC
Confidence            73

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.17  E-value=0.00024  Score=68.36  Aligned_cols=72  Identities=15%  Similarity=0.218  Sum_probs=49.4

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCC--CeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPR--SVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~--~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +.+++++|+|+ |++|++++..|++.|++|++++|+.+.  +..+.+..  .+.  ..|+   +++.+  ..+|+|||++
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~---~~~~~--~~~DivIn~t  188 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSM---DSIPL--QTYDLVINAT  188 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEG---GGCCC--SCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeH---HHhcc--CCCCEEEECC
Confidence            57889999998 899999999999999999999998652  22222211  222  2333   22211  3789999999


Q ss_pred             cCCC
Q 013761          235 TARS  238 (437)
Q Consensus       235 g~~~  238 (437)
                      +...
T Consensus       189 ~~~~  192 (272)
T 1p77_A          189 SAGL  192 (272)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            8654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.16  E-value=0.0013  Score=65.60  Aligned_cols=74  Identities=16%  Similarity=0.161  Sum_probs=57.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh-hCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD-MLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~-~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+|||+|+ |+||..+++.+...|++|++++++.+. +... .++...   ..|..+.+.+.++..++|+||+++|..
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~---v~~~~~~~~~~~~~~~~D~vid~~g~~  262 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS---FLVSRDQEQMQAAAGTLDGIIDTVSAV  262 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE---EEETTCHHHHHHTTTCEEEEEECCSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce---EEeccCHHHHHHhhCCCCEEEECCCcH
Confidence            5789999996 999999999999999999999987663 2222 444331   247777777777777899999999853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.13  E-value=0.00099  Score=68.08  Aligned_cols=72  Identities=22%  Similarity=0.337  Sum_probs=59.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      +++|+|.|. |.+|+.+++.|.+.|++|++++++++. +....  .++.++.+|.++++.++++ ++.+|+||.+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~--~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK--FGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH--TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh--CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            357999986 999999999999999999999998763 12222  3567889999999999887 778899988764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.09  E-value=0.00072  Score=65.43  Aligned_cols=70  Identities=11%  Similarity=0.200  Sum_probs=52.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++++|+|+ |++|++++..|++.|+ +|+++.|+.+.  .+.+...+..+     ..+++.+++.++|+|||+-..
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~--a~~la~~~~~~-----~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSR--FNNWSLNINKI-----NLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGG--GTTCCSCCEEE-----CHHHHHHTGGGCSEEEECCC-
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHH--HHHHHHhcccc-----cHhhHHHHhcCCCEEEECccC
Confidence            56889999997 8999999999999998 89999998653  22232233222     345677778889999998654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.09  E-value=0.0034  Score=62.07  Aligned_cols=97  Identities=13%  Similarity=0.179  Sum_probs=71.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH-HH----HhhC----CCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ-EV----VDML----PRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~-~~----~~~~----~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      .++|.|+|+ |.+|..++..|+..|.  +|+++|++.+. +.    +...    ...+.+...|       .++++++|+
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aDv   76 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDADI   76 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCCE
Confidence            568999996 9999999999999986  89999997642 11    1111    1234444333       246788999


Q ss_pred             EEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          230 IIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       230 VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ||.+||....+   -.+.+..|..-...+++++.++..+
T Consensus        77 Vvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~  115 (326)
T 3pqe_A           77 VCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFD  115 (326)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999975432   3457899999999999999887765

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.07  E-value=0.00066  Score=67.71  Aligned_cols=72  Identities=24%  Similarity=0.238  Sum_probs=51.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC---cH-HHHhhCCCCeEEEEecCCC--HHHHHHHHhcccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA---DQ-EVVDMLPRSVEIVLGDVGD--PCTLKAAVENCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~---~~-~~~~~~~~~v~~v~~Dltd--~~~v~~a~~~~D~VIh  232 (437)
                      +.+++|||+|| |+||..+++.+...|++|++++++.   +. +..+.++  +..+  | .+  .+.+.+.-.++|+||+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g--a~~v--~-~~~~~~~~~~~~~~~d~vid  252 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK--TNYY--N-SSNGYDKLKDSVGKFDVIID  252 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT--CEEE--E-CTTCSHHHHHHHCCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC--Ccee--c-hHHHHHHHHHhCCCCCEEEE
Confidence            56899999999 9999999999999999999999987   43 2233333  3333  5 44  1233331146899999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       253 ~~g~  256 (366)
T 2cdc_A          253 ATGA  256 (366)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.06  E-value=0.00092  Score=68.51  Aligned_cols=77  Identities=19%  Similarity=0.156  Sum_probs=52.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEE--ecCCC----------------HHHH
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVL--GDVGD----------------PCTL  220 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~--~Dltd----------------~~~v  220 (437)
                      .+++|||+||+|+||..+++.+...|++|++++++.+. +..+.++....+-.  .|+.+                .+.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  299 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV  299 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence            57899999999999999999999999999999986653 33444543322211  12211                2333


Q ss_pred             HHHH-hcccEEEEeccC
Q 013761          221 KAAV-ENCNKIIYCATA  236 (437)
Q Consensus       221 ~~a~-~~~D~VIh~Ag~  236 (437)
                      .++. .++|+||+++|.
T Consensus       300 ~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          300 VEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHSSCCSEEEECSCH
T ss_pred             HHHhCCCceEEEECCCc
Confidence            3333 247999999983

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.04  E-value=0.00064  Score=67.84  Aligned_cols=100  Identities=16%  Similarity=0.214  Sum_probs=70.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcHH-----H--HhhC--CCCeEEEEecCCCHHHHHH
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQE-----V--VDML--PRSVEIVLGDVGDPCTLKA  222 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~~-----~--~~~~--~~~v~~v~~Dltd~~~v~~  222 (437)
                      +...+|.|+||+|+||+.|+-.|+....       ++.++|..+...     .  +...  +.....+..+  |   ..+
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~---~~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--D---PRV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--C---HHH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--C---hHH
Confidence            4456999999999999999998887542       788898865411     1  1222  1122222222  2   457


Q ss_pred             HHhcccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          223 AVENCNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       223 a~~~~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      +++++|+||-.||....+   -.+.++.|..-...+.+++.++.
T Consensus        97 a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a  140 (345)
T 4h7p_A           97 AFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVA  140 (345)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhc
Confidence            899999999999986533   45689999999999999987754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.99  E-value=0.001  Score=65.58  Aligned_cols=73  Identities=15%  Similarity=0.175  Sum_probs=52.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~~~D~VIh~Ag  235 (437)
                      .+++|||+|| |+||..+++.+...|++|++++++.+. +..+.++...   ..|..+.+   .+.++..++|+||+++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL---VVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE---EECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCE---EecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            4679999999 889999999999999999999987653 2334444321   24666543   33333356899999997


Q ss_pred             C
Q 013761          236 A  236 (437)
Q Consensus       236 ~  236 (437)
                      .
T Consensus       240 ~  240 (339)
T 1rjw_A          240 S  240 (339)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.95  E-value=0.0021  Score=63.67  Aligned_cols=99  Identities=13%  Similarity=0.192  Sum_probs=63.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH-H--H--HhhCC---CCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ-E--V--VDMLP---RSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~-~--~--~~~~~---~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      ..+++|.|+|| |.+|..++..|+..|.  +|+++|++.+. +  .  +....   ..+.+...|       .++++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence            45679999996 9999999999999886  89999997541 1  1  11111   233433322       24688899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||++||....+   -.+.++.|..-...+++++.++..+
T Consensus        79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~  118 (326)
T 3vku_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFN  118 (326)
T ss_dssp             EEEECCCCC----------------CHHHHHHHHHTTTCC
T ss_pred             EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            999999975432   3457888988888999999887755

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.92  E-value=0.001  Score=64.18  Aligned_cols=71  Identities=15%  Similarity=0.204  Sum_probs=49.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCC-CeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPR-SVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~-~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.+++++|+|+ |++|++++..|++.|+ +|+++.|+.+.  +..+.+.. .+..+  ++.+.   ..  .++|+|||+
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~l---~~--~~~DivIna  188 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEAL---EG--QSFDIVVNA  188 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGGG---TT--CCCSEEEEC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHHh---cc--cCCCEEEEC
Confidence            367899999997 8999999999999996 99999998653  22222221 23332  33222   11  578999998


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      -..
T Consensus       189 Tp~  191 (272)
T 3pwz_A          189 TSA  191 (272)
T ss_dssp             SSG
T ss_pred             CCC
Confidence            643

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.92  E-value=0.00083  Score=65.67  Aligned_cols=73  Identities=16%  Similarity=0.176  Sum_probs=54.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+.+|||+||+|+||...++.+...|++|+++++....+..+.++...   ..|..+.+.+.+.+.++|+||.++|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~---~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQ---CINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSE---EEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCE---EEeCCCcchhhhhccCCCEEEECCC
Confidence            467999999999999999999999999999887644333334444332   2366555546666678999999987

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.91  E-value=0.0033  Score=61.29  Aligned_cols=60  Identities=13%  Similarity=0.144  Sum_probs=49.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.|++++|.|+++-+|+.++..|+..|++|+++.|....                +   + +.+.+..+|+||...|..
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~----------------l---~-l~~~~~~ADIVI~Avg~p  221 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTST----------------E---D-MIDYLRTADIVIAAMGQP  221 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCH----------------H---H-HHHHHHTCSEEEECSCCT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCC----------------c---h-hhhhhccCCEEEECCCCC
Confidence            3789999999999999999999999999999999875321                0   0 237888999999999864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.90  E-value=0.0014  Score=64.72  Aligned_cols=72  Identities=19%  Similarity=0.229  Sum_probs=48.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH-HHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP-CTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~-~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+++|||+||+|+||..+++.+...|++|+++ ++.+. +..+.++..  .+. +-.+. +.+.++..  ++|+||.++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~--~i~-~~~~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGAT--PID-ASREPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSE--EEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCC--Eec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence            47899999999999999999999999999988 55442 233344332  222 22222 23333333  5799999997

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.88  E-value=0.0014  Score=67.93  Aligned_cols=70  Identities=17%  Similarity=0.407  Sum_probs=57.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~  233 (437)
                      .|+|+|.|+ |.+|++|++.|.++|++|++++++++.  .....+  .+.++.||-++++.++++ ++.+|++|-+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--DLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            468999988 899999999999999999999998763  122223  578899999999999887 5678998754

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.86  E-value=0.0078  Score=59.11  Aligned_cols=101  Identities=21%  Similarity=0.193  Sum_probs=71.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC-C--CeEEEEecCCc--HHH--HhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR-G--YSVKALVRKAD--QEV--VDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~-G--~~V~~~~R~~~--~~~--~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|.|+||+|.+|..++..|+.. +  .+++++|++..  ...  +......+.+... .+  +...+.++++|+||.+|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~a   77 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLISA   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEeC
Confidence            48999999999999999998875 5  58999998762  111  1222222222211 11  11346788999999999


Q ss_pred             cCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          235 TARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       235 g~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |....+   -.+.++.|..-...+.+++.++..+
T Consensus        78 g~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~  111 (312)
T 3hhp_A           78 GVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK  111 (312)
T ss_dssp             SCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            975433   4568999999999999999887755

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.83  E-value=0.0045  Score=61.16  Aligned_cols=73  Identities=26%  Similarity=0.246  Sum_probs=52.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC----HHHHHHHHh-----cccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD----PCTLKAAVE-----NCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd----~~~v~~a~~-----~~D~  229 (437)
                      .+.+|||+|+ |+||..+++.+...|++|++++++++. +..+.++... +  .|..+    .+.+.+...     ++|+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~--~~~~~~~~~~~~i~~~~~~~~g~g~D~  243 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-T--LVVDPAKEEESSIIERIRSAIGDLPNV  243 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-E--EECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCE-E--EcCcccccHHHHHHHHhccccCCCCCE
Confidence            4679999997 999999999888899999999887653 3344554432 2  24443    345555553     5899


Q ss_pred             EEEeccC
Q 013761          230 IIYCATA  236 (437)
Q Consensus       230 VIh~Ag~  236 (437)
                      ||+++|.
T Consensus       244 vid~~g~  250 (352)
T 1e3j_A          244 TIDCSGN  250 (352)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999874

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.81  E-value=0.001  Score=64.50  Aligned_cols=70  Identities=20%  Similarity=0.321  Sum_probs=48.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCC--CeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPR--SVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~--~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      +.+++++|+|+ |++|++++..|++.|+ +|++++|+.+.  +..+.+..  .+..+  ++.+   +   ..++|+|||+
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~---l---~~~aDiIIna  194 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ---L---KQSYDVIINS  194 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG---C---CSCEEEEEEC
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH---h---cCCCCEEEEc
Confidence            67899999998 8999999999999996 99999998653  12222221  23333  2222   1   1578999998


Q ss_pred             ccCC
Q 013761          234 ATAR  237 (437)
Q Consensus       234 Ag~~  237 (437)
                      -...
T Consensus       195 Tp~g  198 (281)
T 3o8q_A          195 TSAS  198 (281)
T ss_dssp             SCCC
T ss_pred             CcCC
Confidence            7543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.77  E-value=0.0042  Score=61.15  Aligned_cols=100  Identities=15%  Similarity=0.157  Sum_probs=70.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC-cH--H--HHh---h---CCCCeEEEEecCCCHHHHHHHHhc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA-DQ--E--VVD---M---LPRSVEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~-~~--~--~~~---~---~~~~v~~v~~Dltd~~~v~~a~~~  226 (437)
                      +..++|.|.|+ |.+|..++..|+..|+ +|+++|+++ +.  +  ..+   .   ......+...+  |.    +++++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~----~a~~~   78 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY----ADTAD   78 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG----GGGTT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH----HHhCC
Confidence            34578999997 9999999999999999 999999984 21  0  000   0   01111222111  22    46788


Q ss_pred             ccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          227 CNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +|+||.+||....+   -.+.+..|..-...+.+++.++..+
T Consensus        79 aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~  120 (315)
T 3tl2_A           79 SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPN  120 (315)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999975433   3468899999999999999887654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.75  E-value=0.0085  Score=59.07  Aligned_cols=100  Identities=14%  Similarity=0.158  Sum_probs=71.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH---H--HhhC----CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE---V--VDML----PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~---~--~~~~----~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      |.+++|.|+|+ |.+|..++..|+..|. +|+++|++.+..   .  +...    .....+...+  |.    ++++++|
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~~aD   75 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLENSD   75 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHCCCC
Confidence            44578999995 9999999999999987 999999987631   1  1111    1122222111  22    5788899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.+||....+   ..+.+..|..-...+++.+.++...
T Consensus        76 vVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~  115 (321)
T 3p7m_A           76 VVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPN  115 (321)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCC
Confidence            999999975432   3457889999999999999887755

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.75  E-value=0.0022  Score=63.33  Aligned_cols=73  Identities=14%  Similarity=0.113  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh--cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE--NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~--~~D~VIh  232 (437)
                      .+.+|||+|| |+||..+++.+...|+ +|++++++++. +..+.++...   ..|..+.+   .+.++..  ++|+||+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~v~~~~~g~g~D~vid  242 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY---VINPFEEDVVKEVMDITDGNGVDVFLE  242 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE---EECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE---EECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence            5679999999 9999999999999999 99999987653 2333333221   13555433   2333332  5899999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       243 ~~g~  246 (348)
T 2d8a_A          243 FSGA  246 (348)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9973

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.73  E-value=0.0088  Score=58.25  Aligned_cols=97  Identities=16%  Similarity=0.144  Sum_probs=70.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHH---HH--hh----CCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQE---VV--DM----LPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~---~~--~~----~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|+|| |.+|.+++..|+..|.  +|+++|++++..   ..  ..    +.....+...  +|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            48999999 9999999999999997  999999987521   11  11    2222333322  12    3578899999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.+||....+   ..+++..|..-...+++.+.++..+
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~  111 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPE  111 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            9999975432   3467889998889999999888655

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.73  E-value=0.0026  Score=64.69  Aligned_cols=72  Identities=26%  Similarity=0.326  Sum_probs=54.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      +.+++|+|.|+ |+||+.+++.|...|+ +|++++|+.+.  +....++.  .+  .   +.+++.+++.++|+||.+.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~--~~--~---~~~~l~~~l~~aDvVi~at~  236 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG--EA--V---RFDELVDHLARSDVVVSATA  236 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC--EE--C---CGGGHHHHHHTCSEEEECCS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC--ce--e---cHHhHHHHhcCCCEEEEccC
Confidence            67899999998 9999999999999998 99999998653  22233322  21  1   23456777889999999987


Q ss_pred             CCC
Q 013761          236 ARS  238 (437)
Q Consensus       236 ~~~  238 (437)
                      ...
T Consensus       237 ~~~  239 (404)
T 1gpj_A          237 APH  239 (404)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.73  E-value=0.0074  Score=57.18  Aligned_cols=95  Identities=15%  Similarity=0.193  Sum_probs=63.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC-------------------cH-H----HHhhCCC--CeEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA-------------------DQ-E----VVDMLPR--SVEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~-------------------~~-~----~~~~~~~--~v~~v~  211 (437)
                      +.+++|+|.|+ |++|+++++.|+..|. +|+++|++.                   .. +    .+..+..  .+..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            44579999986 8999999999999996 899999876                   21 1    1112222  345555


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCcee
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLA  267 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~  267 (437)
                      .+++ .+.+.++++++|+||.+...    ..        .-..+.+++.+.++.+.
T Consensus       108 ~~~~-~~~~~~~~~~~DvVi~~~d~----~~--------~~~~l~~~~~~~~~p~i  150 (249)
T 1jw9_B          108 ALLD-DAELAALIAEHDLVLDCTDN----VA--------VRNQLNAGCFAAKVPLV  150 (249)
T ss_dssp             SCCC-HHHHHHHHHTSSEEEECCSS----HH--------HHHHHHHHHHHHTCCEE
T ss_pred             ccCC-HhHHHHHHhCCCEEEEeCCC----HH--------HHHHHHHHHHHcCCCEE
Confidence            5665 45677888999999987531    11        12345666777675543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.72  E-value=0.002  Score=63.65  Aligned_cols=73  Identities=12%  Similarity=0.191  Sum_probs=50.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC--HHHHHHHH-hcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD--PCTLKAAV-ENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd--~~~v~~a~-~~~D~VIh~Ag  235 (437)
                      .+.+|||+||+|+||..+++.+...|++|++++++.+. +..+.++... +  .|..+  .+.+.++- .++|+||+++|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~~~~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADI-V--LNHKESLLNQFKTQGIELVDYVFCTFN  226 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSE-E--ECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE-E--EECCccHHHHHHHhCCCCccEEEECCC
Confidence            47799999999999999999999999999999987653 2333343321 1  23332  12333331 14799999987

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.71  E-value=0.01  Score=58.61  Aligned_cols=100  Identities=14%  Similarity=0.165  Sum_probs=70.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH---H--Hhh----CCCCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE---V--VDM----LPRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~---~--~~~----~~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      |.+++|.|+|| |.+|..++..|+..|. +|+++|++.+..   .  +..    ......+...  +|.    ++++++|
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~----~a~~~aD   77 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY----AAIEGAD   77 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG----GGGTTCS
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH----HHHCCCC
Confidence            45679999998 9999999999999998 999999987621   1  111    1112222211  122    5788999


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.+||....+   ..+.+..|..-...+++.+.++..+
T Consensus        78 iVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~  117 (324)
T 3gvi_A           78 VVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPE  117 (324)
T ss_dssp             EEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCC
Confidence            999999975432   3457888999999999999887754

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.71  E-value=0.0011  Score=65.28  Aligned_cols=89  Identities=16%  Similarity=0.133  Sum_probs=67.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEeccCCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCATARST  239 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag~~~~  239 (437)
                      .++++|.|+ |.+|+.+++.|.++|+ |++++++++.....  ...+.++.+|.+|++.++++ ++++|.||-+.+.   
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~--~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~---  187 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL--RSGANFVHGDPTRVSDLEKANVRGARAVIVDLES---  187 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHHHH--HTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS---
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhhHH--hCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc---
Confidence            458999996 9999999999999999 99999887632122  24688999999999999988 7888999876531   


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          240 ITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       240 ~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                         +  +.|    ..++..+++.+.+
T Consensus       188 ---d--~~n----~~~~~~ar~~~~~  204 (336)
T 1lnq_A          188 ---D--SET----IHCILGIRKIDES  204 (336)
T ss_dssp             ---H--HHH----HHHHHHHHTTCTT
T ss_pred             ---c--HHH----HHHHHHHHHHCCC
Confidence               1  234    3456667777665

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.63  E-value=0.0028  Score=65.15  Aligned_cols=73  Identities=15%  Similarity=0.219  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC-------------H-------H
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-------------P-------C  218 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-------------~-------~  218 (437)
                      .+.+|||+||+|+||...++.+...|++|++++++.+. +.++.++....   .|..+             .       +
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~v---i~~~~~d~~~~~~~~~~~~~~~~~~~~  304 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAI---IDRNAEGYRFWKDENTQDPKEWKRFGK  304 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEE---EETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEE---EecCcCcccccccccccchHHHHHHHH
Confidence            47899999999999999999999999999999986552 23334433221   22222             2       3


Q ss_pred             HHHHHHh--cccEEEEecc
Q 013761          219 TLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       219 ~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+.++..  ++|+||.++|
T Consensus       305 ~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          305 RIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHhCCCCCcEEEEcCC
Confidence            4444443  5799999987

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.63  E-value=0.0023  Score=62.51  Aligned_cols=71  Identities=24%  Similarity=0.299  Sum_probs=47.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH--HHHHHH-hcccEEEEeccC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC--TLKAAV-ENCNKIIYCATA  236 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~--~v~~a~-~~~D~VIh~Ag~  236 (437)
                      +|||+||+|+||..+++.+...|++|++++++.+. +..+.++....   .|..+.+  .+.++. .++|+||.++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~---i~~~~~~~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV---LAREDVMAERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE---EECC---------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEE---EecCCcHHHHHHHhcCCcccEEEECCcH
Confidence            79999999999999999988999999999997652 34445543321   3444432  122221 247999999974

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.60  E-value=0.00038  Score=67.26  Aligned_cols=94  Identities=19%  Similarity=0.216  Sum_probs=52.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHH-CCCeEE-EEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLML-RGYSVK-ALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~-~G~~V~-~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+++|+|+|++|.+|+.+++.+++ .|++|+ +++++.+............+...++...++++++++++|+||.++.. 
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p-   82 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP-   82 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH-
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCCh-
Confidence            346899999999999999998875 578887 44554321000000000000001111112233455678999987631 


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                          .        .+..++++|.++|+.+
T Consensus        83 ----~--------~~~~~~~~a~~~G~~v   99 (273)
T 1dih_A           83 ----E--------GTLNHLAFCRQHGKGM   99 (273)
T ss_dssp             ----H--------HHHHHHHHHHHTTCEE
T ss_pred             ----H--------HHHHHHHHHHhCCCCE
Confidence                1        3455667777777664

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.60  E-value=0.0047  Score=61.70  Aligned_cols=73  Identities=19%  Similarity=0.217  Sum_probs=54.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+|||+|+ |+||..+++.+...|++|++++++++. +..+.++...   ..|..+.+.++++..++|+||.++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~---vi~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE---VVNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE---EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE---EeccccHHHHHHhhcCCCEEEECCCC
Confidence            4679999998 899999999888899999999987663 3333443321   24666766555555678999999985

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.58  E-value=0.0057  Score=60.68  Aligned_cols=73  Identities=11%  Similarity=0.080  Sum_probs=55.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh-hCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD-MLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~-~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+|||+|+ |+||..+++.+...|++|++++++.+. +... .++...   ..|..+.+.+.++..++|+||.++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD---YVIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC---EEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce---eeccccHHHHHHhcCCCCEEEECCCC
Confidence            4679999995 999999999888899999999998764 2233 444322   13566666676666678999999985

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.55  E-value=0.0041  Score=57.34  Aligned_cols=66  Identities=17%  Similarity=0.300  Sum_probs=47.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+++|.|.| +|.+|+++++.|++.|++|++.+|+.+.. .......+.+.        +..++++++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~g~~~~--------~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRT-ARLFPSAAQVT--------FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHH-HHHSBTTSEEE--------EHHHHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCcee--------cHHHHHhCCCEEEECCC
Confidence            346899998 79999999999999999999999976531 11111233321        34567788999998875

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.54  E-value=0.01  Score=57.81  Aligned_cols=59  Identities=15%  Similarity=0.210  Sum_probs=50.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.+++++|.|++.-+|+.+++.|+..|++|+++.+..                      .++.+.+..+|+||..+|..
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------~~L~~~~~~ADIVI~Avg~p  219 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT----------------------AHLDEEVNKGDILVVATGQP  219 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SSHHHHHTTCSEEEECCCCT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc----------------------ccHHHHhccCCEEEECCCCc
Confidence            47899999999999999999999999999999986542                      23567888899999998864


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       220 ~  220 (301)
T 1a4i_A          220 E  220 (301)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.54  E-value=0.0019  Score=63.36  Aligned_cols=98  Identities=14%  Similarity=0.108  Sum_probs=66.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH-H-HhhC-------CCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE-V-VDML-------PRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~-~-~~~~-------~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      +++|.|+|| |.+|..++..|+..|+ +|+++|++.+.. . ...+       .....+...  +|   . ++++++|+|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~V   74 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVI   74 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEE
Confidence            368999999 9999999999999996 999999887521 0 1111       112222211  22   2 457889999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.++|....+   ..+.+..|..-...+.+.+.++..+
T Consensus        75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~  112 (309)
T 1ur5_A           75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPN  112 (309)
T ss_dssp             EECCCC--------CHHHHHHHHHHHHHHHHHGGGCTT
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            9999875432   2346778888888899988887654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.53  E-value=0.0039  Score=61.58  Aligned_cols=69  Identities=19%  Similarity=0.205  Sum_probs=51.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+|||+|+ |+||...++.+...|++|++++++++. +..+.++....+     .+.+.+.+   ++|+||.++|..
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-----~~~~~~~~---~~D~vid~~g~~  245 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-----TDPKQCKE---ELDFIISTIPTH  245 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-----SSGGGCCS---CEEEEEECCCSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-----CCHHHHhc---CCCEEEECCCcH
Confidence            4779999997 999999999888899999999988763 344555544332     34444433   899999998853

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.49  E-value=0.0061  Score=58.04  Aligned_cols=69  Identities=23%  Similarity=0.332  Sum_probs=51.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+ +++|.|+ |+.|++++..|++.|+ +|++++|+.+.  .+.+...+...     ..+++.++++++|+||++...
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~k--a~~la~~~~~~-----~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIER--AKALDFPVKIF-----SLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHH--HHTCCSSCEEE-----EGGGHHHHHHTCSEEEECSST
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH--HHHHHHHcccC-----CHHHHHhhhcCCCEEEECCCC
Confidence            567 8999987 9999999999999998 89999998653  33343333322     224566778899999998643

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.47  E-value=0.0064  Score=58.98  Aligned_cols=70  Identities=20%  Similarity=0.258  Sum_probs=53.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++++|.|+ |.||+++++.|...|++|++.+|+.+. +.....  .+..+     +.++++++++++|+||.+...
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~--g~~~~-----~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEM--GLVPF-----HTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TCEEE-----EGGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC--CCeEE-----chhhHHHHhhCCCEEEECCCh
Confidence            67899999996 999999999999999999999998653 112222  23322     124577888999999998864

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.47  E-value=0.0076  Score=60.13  Aligned_cols=74  Identities=19%  Similarity=0.259  Sum_probs=51.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHH---HHHHHh-cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCT---LKAAVE-NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~---v~~a~~-~~D~VIh~Ag  235 (437)
                      .+.+|||+||+|+||...++.+...|++|+++.+....+..+.++... +  .|..+.+.   +.++.. ++|++|.++|
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~v~~~t~g~~d~v~d~~g  240 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEE-V--FDYRAPNLAQTIRTYTKNNLRYALDCIT  240 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSE-E--EETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcE-E--EECCCchHHHHHHHHccCCccEEEECCC
Confidence            578999999999999999999989999999886432234445554332 2  35544433   333332 3799999987


Q ss_pred             C
Q 013761          236 A  236 (437)
Q Consensus       236 ~  236 (437)
                      .
T Consensus       241 ~  241 (371)
T 3gqv_A          241 N  241 (371)
T ss_dssp             S
T ss_pred             c
Confidence            4

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.47  E-value=0.0018  Score=67.39  Aligned_cols=67  Identities=13%  Similarity=0.051  Sum_probs=48.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+|+|+|||++ +||+.+++.|...|++|++.++++... .....  .     .|+.+.   ++++..+|+|+.+.|.
T Consensus       263 L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~--g-----~dv~~l---ee~~~~aDvVi~atG~  330 (488)
T 3ond_A          263 IAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATME--G-----LQVLTL---EDVVSEADIFVTTTGN  330 (488)
T ss_dssp             CTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--T-----CEECCG---GGTTTTCSEEEECSSC
T ss_pred             ccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh--C-----CccCCH---HHHHHhcCEEEeCCCC
Confidence            689999999985 999999999999999999999876431 11111  1     133343   3455667888877654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.46  E-value=0.016  Score=56.88  Aligned_cols=97  Identities=19%  Similarity=0.153  Sum_probs=68.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHH---H--Hhh----CCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQE---V--VDM----LPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~---~--~~~----~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++|++.+..   .  +..    ......+...|  +    .++++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            57999997 9999999999999886  899999987521   1  111    11233333222  2    2578889999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.+||....+   -.+.+..|..-...+.+++.++..+
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~  111 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPD  111 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCC
Confidence            9999975432   3468899999999999999887755

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.46  E-value=0.013  Score=58.76  Aligned_cols=70  Identities=20%  Similarity=0.349  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +.+++|+|.|+ |.+|+.+++.+.+.|++|++++......... ..  -.++..|..|.+.+.++++.+|+|+-
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~-~a--d~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY-VA--HEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGG-GS--SEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhh-hC--CEEEECCCCCHHHHHHHHHhCCccee
Confidence            56789999986 7899999999999999999998865422111 11  24667899999999999999998744

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.45  E-value=0.0034  Score=62.34  Aligned_cols=73  Identities=15%  Similarity=0.098  Sum_probs=51.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH-HHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP-CTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~-~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+|||+|| |+||..+++.+...|++|++++++.+. +..+.++... +  .|..+. +..+++..++|+||.++|.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADH-Y--IATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE-E--EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCE-E--EcCcCchHHHHHhhcCCCEEEECCCC
Confidence            4679999999 999999999888899999999987663 3333443322 2  344443 3333333578999999985

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.41  E-value=0.0076  Score=61.22  Aligned_cols=76  Identities=21%  Similarity=0.207  Sum_probs=53.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCC-------------CH-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVG-------------DP-------  217 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dlt-------------d~-------  217 (437)
                      +.+++|+|+|+ |.||..+++.+...|++|++++++.+. +....++  ..++..|..             +.       
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lG--a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  246 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMG--AEFLELDFKEEAGSGDGYAKVMSDAFIKAEM  246 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTT--CEECCC--------CCHHHHHHSHHHHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC--CEEEEecccccccccccchhhccHHHHHHHH
Confidence            56789999996 999999999999999999999998763 2233343  333322221             11       


Q ss_pred             HHHHHHHhcccEEEEeccCC
Q 013761          218 CTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       218 ~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +.+.+++.++|+||.++++.
T Consensus       247 ~~l~e~~~~aDvVI~~~~~p  266 (401)
T 1x13_A          247 ELFAAQAKEVDIIVTTALIP  266 (401)
T ss_dssp             HHHHHHHHHCSEEEECCCCT
T ss_pred             HHHHHHhCCCCEEEECCccC
Confidence            14677788899999997653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.40  E-value=0.0095  Score=59.02  Aligned_cols=76  Identities=13%  Similarity=0.060  Sum_probs=52.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh------cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE------NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~------~~D~VI  231 (437)
                      .+.+|||+|| |+||...++.+...|++ |++++++++. +..+.+...+..+..|-.+.+++.+.+.      ++|+||
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi  257 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL  257 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence            4678999998 99999999988889997 8888887653 2333333344444444444444443332      479999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .++|.
T Consensus       258 d~~g~  262 (363)
T 3m6i_A          258 ECTGV  262 (363)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99873

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.40  E-value=0.012  Score=58.89  Aligned_cols=72  Identities=14%  Similarity=0.221  Sum_probs=55.5

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +.+.+|+|+|.|+ |.+|+.+++.+.+.|++|++++.+...... ...  -..+..|..|.+.+.++++.+|+|..
T Consensus        10 ~~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~-~~a--d~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           10 IILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCA-QVA--DIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTT-TTC--SEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchH-HhC--CceEecCcCCHHHHHHHHHhCCEeee
Confidence            3467899999986 679999999999999999999876542111 111  13456899999999999999998743

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.39  E-value=0.0069  Score=58.65  Aligned_cols=58  Identities=21%  Similarity=0.288  Sum_probs=49.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+++|.|+++-+|+.++..|+..|++|+++.+...                      .+++.+..+|+||...|..
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~----------------------~L~~~~~~ADIVI~Avg~p  214 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK----------------------DLSLYTRQADLIIVAAGCV  214 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS----------------------CHHHHHTTCSEEEECSSCT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch----------------------hHHHHhhcCCEEEECCCCC
Confidence            378999999999999999999999999999999876431                      3567888899999998853

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.37  E-value=0.021  Score=56.54  Aligned_cols=100  Identities=15%  Similarity=0.199  Sum_probs=71.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HH--HhhC---CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EV--VDML---PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~--~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      ...++|.|+|| |.+|..++..|+..|.  +|+++|++.+.   ..  +...   ......+..  .|.    +.++++|
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~----~~~~~aD   89 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY----SVTANSK   89 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----GGGTTEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH----HHhCCCC
Confidence            45679999997 9999999999999996  89999987541   11  1111   112222222  233    2588899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.+||....+   -.+.+..|..-...+.+++.++...
T Consensus        90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~  129 (331)
T 4aj2_A           90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQ  129 (331)
T ss_dssp             EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999975432   3568999999999999999887654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.34  E-value=0.0086  Score=57.92  Aligned_cols=70  Identities=21%  Similarity=0.270  Sum_probs=53.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+.+++|+|.|+ |.||+.+++.|...|++|++.+|+.+. +.....  .+.++     +.++++++++++|+||.+..
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--g~~~~-----~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEM--GMEPF-----HISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC--CCeec-----ChhhHHHHhcCCCEEEECCC
Confidence            367899999985 999999999999999999999998653 122222  23322     23457788899999999875

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.29  E-value=0.0083  Score=60.43  Aligned_cols=75  Identities=21%  Similarity=0.133  Sum_probs=53.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCC----------------------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVG----------------------  215 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dlt----------------------  215 (437)
                      +.+++|+|+|+ |.||..+++.+...|++|++++|+... +....++.  .++..|..                      
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga--~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~  246 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG--KFITVDDEAMKTAETAGGYAKEMGEEFRKK  246 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC--EECCC-----------------------CC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--eEEeecccccccccccccchhhcCHHHHhh
Confidence            56889999996 999999999999999999999998753 23333432  22211221                      


Q ss_pred             CHHHHHHHHhcccEEEEeccC
Q 013761          216 DPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       216 d~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+.+.+++.++|+||+++.+
T Consensus       247 ~~~~l~~~~~~aDvVi~~~~~  267 (384)
T 1l7d_A          247 QAEAVLKELVKTDIAITTALI  267 (384)
T ss_dssp             HHHHHHHHHTTCSEEEECCCC
T ss_pred             hHHHHHHHhCCCCEEEECCcc
Confidence            123377788889999998843

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.29  E-value=0.0079  Score=59.04  Aligned_cols=72  Identities=14%  Similarity=0.158  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHH---hcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAV---ENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~---~~~D~VIh~Ag  235 (437)
                      .+.+|||+|+ |+||...++.+...|++|++++++.+. +..+.++....   .|..+.+..+.+.   .++|+||.++|
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~---i~~~~~~~~~~~~~~~g~~d~vid~~g  241 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA---VNARDTDPAAWLQKEIGGAHGVLVTAV  241 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE---EETTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE---EeCCCcCHHHHHHHhCCCCCEEEEeCC
Confidence            4679999997 899999999988899999999987663 34445543322   3554433333332   36899999986

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.29  E-value=0.0075  Score=59.96  Aligned_cols=74  Identities=15%  Similarity=0.055  Sum_probs=50.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+.+|||+| +|+||..+++.+...|++|++++++.+. +..+.++... ++.-+-.| .+.+.++..  ++|+||.++|
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~v~~~~~g~g~D~vid~~g  266 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADH-GINRLEEDWVERVYALTGDRGADHILEIAG  266 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEEETT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence            478999999 8999999999998999999999987653 3334444322 22111112 223444443  5799999998

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.28  E-value=0.033  Score=54.96  Aligned_cols=97  Identities=16%  Similarity=0.164  Sum_probs=68.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH-H--H--h----hCC--CCeEEEEecCCCHHHHHHHHhccc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE-V--V--D----MLP--RSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~-~--~--~----~~~--~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      .++|.|.|| |.+|..++..|+..|+ +|+++|++++.. .  .  .    .+.  ..+.+.    +   +++++++++|
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~---d~~ea~~~aD   80 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----Y---SYEAALTGAD   80 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----C---SHHHHHTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----C---CHHHHhCCCC
Confidence            358999998 9999999999999998 999999987621 1  1  0    111  122211    2   2455789999


Q ss_pred             EEEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.++|.....        ..+.+..|..-...+++.+.++..+
T Consensus        81 iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~  125 (331)
T 1pzg_A           81 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK  125 (331)
T ss_dssp             EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999865321        2346778888888888888777544

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.28  E-value=0.0062  Score=59.01  Aligned_cols=68  Identities=16%  Similarity=0.271  Sum_probs=49.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++++|.|+ |+.|++++..|++.|+ +|+++.|+.+.  .+.+...+..+  +   .+++.+ + .+|+|||+-..
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~k--a~~La~~~~~~--~---~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEK--TSEIYGEFKVI--S---YDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHH--HHHHCTTSEEE--E---HHHHTT-C-CCSEEEECSST
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH--HHHHHHhcCcc--c---HHHHHh-c-cCCEEEECCcc
Confidence            67899999997 8999999999999998 89999998653  22222233322  1   233444 4 78999998754

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.26  E-value=0.031  Score=54.82  Aligned_cols=99  Identities=12%  Similarity=0.208  Sum_probs=70.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHH--h----hCCCCeEEEEecCCCHHHHHHHHhcc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVV--D----MLPRSVEIVLGDVGDPCTLKAAVENC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~--~----~~~~~v~~v~~Dltd~~~v~~a~~~~  227 (437)
                      ++.++|.|+|| |.+|..++..|+..|  .+|+++|++.+.   ...  .    .+...+.+.. |  +    .++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCC
Confidence            34569999999 999999999999888  489999987541   011  1    1112334332 2  2    3568899


Q ss_pred             cEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          228 NKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       228 D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |+||..||.....   ..+.+..|..-...+++.+.++...
T Consensus        76 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~  116 (317)
T 3d0o_A           76 DLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFD  116 (317)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999975432   2356788888888899888887654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.23  E-value=0.0071  Score=61.01  Aligned_cols=76  Identities=14%  Similarity=0.145  Sum_probs=55.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecC------------------CCHHH
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDV------------------GDPCT  219 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dl------------------td~~~  219 (437)
                      +.+++|+|.|+ |.+|..+++.|...|++|++++|+.+. +....++  ..++..|+                  .+.+.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lG--a~~~~l~~~~~~~~gya~~~~~~~~~~~~~~  258 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVG--AQWLDLGIDAAGEGGYARELSEAERAQQQQA  258 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTT--CEECCCC-------------CHHHHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CeEEeccccccccccchhhhhHHHHhhhHHH
Confidence            46789999998 999999999999999999999998763 2333332  33332221                  12456


Q ss_pred             HHHHHhcccEEEEeccCC
Q 013761          220 LKAAVENCNKIIYCATAR  237 (437)
Q Consensus       220 v~~a~~~~D~VIh~Ag~~  237 (437)
                      +.+++.++|+||.++.+.
T Consensus       259 l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          259 LEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHTTCSEEEECCCCT
T ss_pred             HHHHHhcCCEEEECCCCC
Confidence            778888999999987654

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.22  E-value=0.0076  Score=61.00  Aligned_cols=75  Identities=13%  Similarity=0.185  Sum_probs=56.3

Q ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       155 ~~~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      ..++|.+++|+|.|+ |.+|+.+++.+.+.|++|++++ ....... ...+....+.+|..|.+.+.++++.+|+|+-
T Consensus        18 ~~~mm~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~-~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           18 QGHMWNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAK-QISAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             ---CCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTG-GGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             eccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHH-HhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            344566889999987 7899999999999999999999 5432111 1222224567899999999999999998764

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.22  E-value=0.031  Score=54.33  Aligned_cols=97  Identities=19%  Similarity=0.168  Sum_probs=69.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHHh--h----CCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVVD--M----LPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~~--~----~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|+|| |+||+.++-.|+.++  -+++++|.+.+.   +..+  .    +.....+...+  |.    +.++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            57999995 999999999998887  479999987641   1111  1    22233333322  22    357789999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |-.||....+   ..+.++.|..-...+.+++.++..+
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~  111 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPE  111 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9999976533   4568999999999999999888765

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.20  E-value=0.031  Score=54.84  Aligned_cols=97  Identities=21%  Similarity=0.290  Sum_probs=66.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HHHhhCC-----CCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EVVDMLP-----RSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~~~~~~-----~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      .++|.|+|| |.+|..++..|+..|.  +|+++|.+.+.   .......     ..+.+..   .+    .++++++|+|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDvV   78 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDVI   78 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCEE
Confidence            358999998 9999999999999987  89999997642   1111111     1222221   22    3468899999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.++|....+   ..+.+..|+.-...+++.+.++...
T Consensus        79 ii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~  116 (318)
T 1y6j_A           79 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNH  116 (318)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             EEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCC
Confidence            9999975422   2457888998899999999887644

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.19  E-value=0.0016  Score=65.09  Aligned_cols=90  Identities=12%  Similarity=0.151  Sum_probs=56.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-----C-eEEEEecCCc-HHHHhh----CC--CCeEEEEecCCCHHHHHHHHhc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-----Y-SVKALVRKAD-QEVVDM----LP--RSVEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-----~-~V~~~~R~~~-~~~~~~----~~--~~v~~v~~Dltd~~~v~~a~~~  226 (437)
                      ++++|.|.||||.+|+.|++.|++++     . +|+++.+..+ ......    +.  ..+.+  .|+ +.+    .+.+
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~~----~~~~   80 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EAA----VLGG   80 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CHH----HHTT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CHH----HhcC
Confidence            45799999999999999999999887     3 7777754322 111111    11  12222  233 222    3568


Q ss_pred             ccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceeeee
Q 013761          227 CNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLR  270 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~  270 (437)
                      +|+||.++|...             +..++.++ +.|+++.-++
T Consensus        81 ~DvVf~alg~~~-------------s~~~~~~~-~~G~~vIDlS  110 (352)
T 2nqt_A           81 HDAVFLALPHGH-------------SAVLAQQL-SPETLIIDCG  110 (352)
T ss_dssp             CSEEEECCTTSC-------------CHHHHHHS-CTTSEEEECS
T ss_pred             CCEEEECCCCcc-------------hHHHHHHH-hCCCEEEEEC
Confidence            999999987543             13456666 7787755554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.18  E-value=0.013  Score=59.48  Aligned_cols=77  Identities=17%  Similarity=0.173  Sum_probs=56.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEec----------------CCC-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGD----------------VGD-----  216 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~D----------------ltd-----  216 (437)
                      +.+.+|+|.|+ |-+|..+++.+...|++|+++|++... +....++  ..++..+                +++     
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G--~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~  264 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLG--AKFIAVEDEEFKAAETAGGYAKEMSGEYQVK  264 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTT--CEECCCCC-----------------CHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC--Cceeecccccccccccccchhhhcchhhhhh
Confidence            45679999998 999999999999999999999998763 2333332  2232222                233     


Q ss_pred             -HHHHHHHHhcccEEEEeccCCC
Q 013761          217 -PCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       217 -~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                       .+.+.++++++|+||+++.+..
T Consensus       265 ~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          265 QAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hHhHHHHHhcCCCEEEECCcCCC
Confidence             2578889999999999987654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.18  E-value=0.0062  Score=59.94  Aligned_cols=72  Identities=11%  Similarity=0.121  Sum_probs=49.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHH-hcccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAV-ENCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~-~~~D~VIh~  233 (437)
                      .+.+|||+|| |+||..+++.+...|+ +|++++++.+. +..+.+ .. .  ..|..+.+   .+.++. .++|+||.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~-~--v~~~~~~~~~~~~~~~~~~g~D~vid~  238 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD-R--LVNPLEEDLLEVVRRVTGSGVEVLLEF  238 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS-E--EECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH-h--ccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence            5679999999 9999999998888999 99999987653 222222 21 1  24555432   222222 258999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       239 ~g~  241 (343)
T 2dq4_A          239 SGN  241 (343)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            974

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.15  E-value=0.012  Score=58.38  Aligned_cols=90  Identities=20%  Similarity=0.283  Sum_probs=53.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC---eEEEEe-cCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY---SVKALV-RKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~---~V~~~~-R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +++|+|.||+|.||+.+++.|+++++   +++++. ++............+.+  .|+ |++    .++++|+||.+.|.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~--~~~-~~~----~~~~~DvV~~a~g~   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRV--GDV-DSF----DFSSVGLAFFAAAA   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEEC--EEG-GGC----CGGGCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEE--ecC-CHH----HhcCCCEEEEcCCc
Confidence            46899999999999999999997664   455553 32211100000111111  122 121    25789999999863


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcCCceeeee
Q 013761          237 RSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLR  270 (437)
Q Consensus       237 ~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~  270 (437)
                      .             .+..++..+.+.|+++..++
T Consensus        79 ~-------------~s~~~a~~~~~aG~kvId~S   99 (340)
T 2hjs_A           79 E-------------VSRAHAERARAAGCSVIDLS   99 (340)
T ss_dssp             H-------------HHHHHHHHHHHTTCEEEETT
T ss_pred             H-------------HHHHHHHHHHHCCCEEEEeC
Confidence            2             12456677778888755444

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.15  E-value=0.0069  Score=60.01  Aligned_cols=73  Identities=14%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CC-CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-----HHHhhCCCCeEEEEecCCC------HHHHHHHH---
Q 013761          160 QN-TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-----EVVDMLPRSVEIVLGDVGD------PCTLKAAV---  224 (437)
Q Consensus       160 ~~-k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-----~~~~~~~~~v~~v~~Dltd------~~~v~~a~---  224 (437)
                      .+ .+|||+||+|+||..+++.+...|++|++++++.+.     +..+.++... ++  |..+      .+.+.++.   
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~-vi--~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ-VI--TEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE-EE--EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeE-EE--ecCccchHHHHHHHHHHhhcc
Confidence            46 799999999999999998888899999998876542     2233444322 22  2221      22344443   


Q ss_pred             -hcccEEEEecc
Q 013761          225 -ENCNKIIYCAT  235 (437)
Q Consensus       225 -~~~D~VIh~Ag  235 (437)
                       .++|+||.++|
T Consensus       243 ~~g~Dvvid~~G  254 (364)
T 1gu7_A          243 GGEAKLALNCVG  254 (364)
T ss_dssp             TCCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence             25899999987

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.15  E-value=0.018  Score=58.65  Aligned_cols=70  Identities=16%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +.+++|+|.|+ |.+|+.+++.+.+.|++|++++.+......... +  ..+..|..|.+.+.++++++|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a-d--~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA-D--RHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS-S--EEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC-C--EEEECCcCCHHHHHHHHhcCCEEEE
Confidence            56889999986 789999999999999999999876553222221 1  3556899999999999999999883

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.12  E-value=0.0091  Score=59.24  Aligned_cols=73  Identities=18%  Similarity=0.209  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCH--HHHHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP--CTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~--~~v~~a~~--~~D~VIh~  233 (437)
                      .+.+|||+|| |+||..+++.+... |++|++++++++. +..+.++... +  .|..+.  +.+.++..  ++|+||.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~v~~~~~g~g~Dvvid~  261 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH-V--VDARRDPVKQVMELTRGRGVNVAMDF  261 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSE-E--EETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCE-E--EeccchHHHHHHHHhCCCCCcEEEEC
Confidence            4679999999 99999999888888 9999999987653 3344554332 1  355554  34444443  58999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       262 ~G~  264 (359)
T 1h2b_A          262 VGS  264 (359)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.11  E-value=0.019  Score=56.79  Aligned_cols=73  Identities=18%  Similarity=0.138  Sum_probs=50.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCC--C-HHHHHHHH----hcccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVG--D-PCTLKAAV----ENCNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dlt--d-~~~v~~a~----~~~D~V  230 (437)
                      .+.+|||+|+ |+||..+++.+...|+ +|++++++++. +..+.++.. .+  .|..  | .+..+++.    .++|+|
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~v--i~~~~~~~~~~~~~i~~~~~~g~D~v  246 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-LV--LQISKESPQEIARKVEGQLGCKPEVT  246 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EE--EECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-EE--EcCcccccchHHHHHHHHhCCCCCEE
Confidence            4679999996 9999999998888999 89999987653 344455433 22  3444  2 33333322    358999


Q ss_pred             EEeccC
Q 013761          231 IYCATA  236 (437)
Q Consensus       231 Ih~Ag~  236 (437)
                      |.++|.
T Consensus       247 id~~g~  252 (356)
T 1pl8_A          247 IECTGA  252 (356)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999873

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.10  E-value=0.0062  Score=59.96  Aligned_cols=73  Identities=12%  Similarity=0.177  Sum_probs=50.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHHh--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~~--~~D~VIh~  233 (437)
                      .+.+|||+|| |+||..+++.+...  |++|++++++++. +..+.++... +  .|..+ .+.++++..  ++|+||.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~~~~g~g~D~vid~  245 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADY-V--SEMKDAESLINKLTDGLGASIAIDL  245 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSE-E--ECHHHHHHHHHHHHTTCCEEEEEES
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCE-E--eccccchHHHHHhhcCCCccEEEEC
Confidence            4679999999 99999999988888  9999999987653 2333343221 1  24333 343444443  58999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       246 ~g~  248 (344)
T 2h6e_A          246 VGT  248 (344)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.09  E-value=0.016  Score=58.01  Aligned_cols=73  Identities=10%  Similarity=0.094  Sum_probs=50.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-HHHhhCCCCeEEEEecCC---CHH---HHHHHHh--cccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-EVVDMLPRSVEIVLGDVG---DPC---TLKAAVE--NCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dlt---d~~---~v~~a~~--~~D~  229 (437)
                      .+.+|||+| +|+||..+++.+...| ++|++++++++. +..+.++.. .+  .|..   +.+   .+.++..  ++|+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~v--i~~~~~~~~~~~~~v~~~~~g~g~Dv  270 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LT--LNRRETSVEERRKAIMDITHGRGADF  270 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EE--EETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc-EE--EeccccCcchHHHHHHHHhCCCCCcE
Confidence            467999999 8999999999888899 699999987653 334445432 12  3444   322   2333332  5799


Q ss_pred             EEEeccC
Q 013761          230 IIYCATA  236 (437)
Q Consensus       230 VIh~Ag~  236 (437)
                      ||.++|.
T Consensus       271 vid~~g~  277 (380)
T 1vj0_A          271 ILEATGD  277 (380)
T ss_dssp             EEECSSC
T ss_pred             EEECCCC
Confidence            9999974

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.09  E-value=0.012  Score=58.01  Aligned_cols=81  Identities=14%  Similarity=0.048  Sum_probs=58.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCe-EEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSV-EIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v-~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.+++++|.|++.-+|+.+++.|+..|++|++++|+...  .....+.... .......++++++.+.+..+|+||.+.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt  253 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  253 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence            4789999999998889999999999999999999887431  0111111111 111112245578999999999999998


Q ss_pred             cCCC
Q 013761          235 TARS  238 (437)
Q Consensus       235 g~~~  238 (437)
                      |...
T Consensus       254 g~p~  257 (320)
T 1edz_A          254 PSEN  257 (320)
T ss_dssp             CCTT
T ss_pred             CCCc
Confidence            8644

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.09  E-value=0.011  Score=59.01  Aligned_cols=73  Identities=21%  Similarity=0.298  Sum_probs=51.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-------cccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-------NCNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-------~~D~V  230 (437)
                      .+.+|||+|| |++|...++.+...|+ +|++++++++. +..+.++...   ..|..+.+..+.+.+       ++|+|
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---vi~~~~~~~~~~i~~~~~~~~gg~Dvv  257 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA---TVDPSAGDVVEAIAGPVGLVPGGVDVV  257 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---EECTTSSCHHHHHHSTTSSSTTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---EECCCCcCHHHHHHhhhhccCCCCCEE
Confidence            4679999998 9999999998888999 88888887653 2333443322   235555444444433       58999


Q ss_pred             EEeccC
Q 013761          231 IYCATA  236 (437)
Q Consensus       231 Ih~Ag~  236 (437)
                      |.++|.
T Consensus       258 id~~G~  263 (370)
T 4ej6_A          258 IECAGV  263 (370)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999873

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.04  E-value=0.0073  Score=60.51  Aligned_cols=74  Identities=18%  Similarity=0.265  Sum_probs=52.1

Q ss_pred             CCCEEEEEC-CCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh--cccEEEE
Q 013761          160 QNTTVLVVG-ATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE--NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTG-AtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~--~~D~VIh  232 (437)
                      .+.+|||.| |+|++|...++.+...|++|++++++++. +..+.++....   .|..+.+   .+.++..  ++|+||.
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~---~~~~~~~~~~~v~~~t~~~g~d~v~d  246 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHV---CNAASPTFMQDLTEALVSTGATIAFD  246 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCE---EETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEE---EeCCChHHHHHHHHHhcCCCceEEEE
Confidence            356899997 99999999999888899999999987653 33445543322   2444433   3444443  5899999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       247 ~~g~  250 (379)
T 3iup_A          247 ATGG  250 (379)
T ss_dssp             SCEE
T ss_pred             CCCc
Confidence            9974

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.03  E-value=0.014  Score=56.54  Aligned_cols=58  Identities=24%  Similarity=0.336  Sum_probs=49.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+++|.|+++-+|+.++..|+..|++|+++.+...                      .+++.+..+|+||...|..
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~----------------------~L~~~~~~ADIVI~Avg~p  215 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR----------------------DLADHVSRADLVVVAAGKP  215 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS----------------------CHHHHHHTCSEEEECCCCT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc----------------------CHHHHhccCCEEEECCCCC
Confidence            378999999999999999999999999999999876431                      3557788899999998753

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.03  E-value=0.014  Score=56.54  Aligned_cols=58  Identities=21%  Similarity=0.265  Sum_probs=49.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.|++++|.|+++-+|+.++..|+..|++|+++.+...                      .+++.+..+|+||...|..
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~----------------------~L~~~~~~ADIVI~Avg~p  215 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT----------------------DLKSHTTKADILIVAVGKP  215 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS----------------------SHHHHHTTCSEEEECCCCT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch----------------------hHHHhcccCCEEEECCCCC
Confidence            378999999999999999999999999999998876421                      3567888999999998753

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.02  E-value=0.0051  Score=60.80  Aligned_cols=98  Identities=13%  Similarity=0.191  Sum_probs=68.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHH---H--HhhC---CCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQE---V--VDML---PRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~---~--~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      ..++|.|+|| |.+|..++..|+..+.  +|+++|++.+..   .  +...   ...+.+.. |  +    .++++++|+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDv   79 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADL   79 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            4469999999 9999999999988875  899999975421   1  1111   12333332 2  2    346889999


Q ss_pred             EEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          230 IIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       230 VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ||..||....+   ..+.+..|+.-...+++.+.++...
T Consensus        80 Vii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~  118 (326)
T 2zqz_A           80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFN  118 (326)
T ss_dssp             EEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999975432   2457888988888999988887654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.01  E-value=0.014  Score=56.53  Aligned_cols=37  Identities=24%  Similarity=0.454  Sum_probs=33.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|.||.|.||..++..|.+.|++|++++|+.+
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            3468999999999999999999999999999998754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.99  E-value=0.0048  Score=59.21  Aligned_cols=69  Identities=20%  Similarity=0.320  Sum_probs=49.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHH-hhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVV-DMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~-~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+++|+|.|+ |++|++++..|++.|++|++.+|+.+. +.+ +..  .+.     +.+  ++.++++++|+||++...
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~--g~~-----~~~--~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF--PLE-----VVN--SPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS--CEE-----ECS--CGGGTGGGCSEEEECSST
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc--CCe-----eeh--hHHhhhcCCCEEEEeCCC
Confidence            56789999996 899999999999999999999998652 111 111  222     121  234566789999999865


Q ss_pred             C
Q 013761          237 R  237 (437)
Q Consensus       237 ~  237 (437)
                      .
T Consensus       197 ~  197 (275)
T 2hk9_A          197 G  197 (275)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.97  E-value=0.014  Score=56.11  Aligned_cols=65  Identities=18%  Similarity=0.232  Sum_probs=47.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +++++|.|+ |+.|++++..|++.|.+|+++.|+.+. +.+..+.  +...  ++.+.       .++|+|||+-...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~--~~~~--~~~~l-------~~~DiVInaTp~G  183 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLG--CDCF--MEPPK-------SAFDLIINATSAS  183 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHT--CEEE--SSCCS-------SCCSEEEECCTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC--CeEe--cHHHh-------ccCCEEEEcccCC
Confidence            789999997 999999999999999999999998763 2222222  2222  33332       1789999986543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.97  E-value=0.013  Score=58.03  Aligned_cols=72  Identities=17%  Similarity=0.255  Sum_probs=50.1

Q ss_pred             CCCEEEEECCCChHHHHH-HHHH-HHCCCe-EEEEecCCc---H-HHHhhCCCCeEEEEecCCCHH--HHHHHHhcccEE
Q 013761          160 QNTTVLVVGATSRIGRIV-IRKL-MLRGYS-VKALVRKAD---Q-EVVDMLPRSVEIVLGDVGDPC--TLKAAVENCNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~l-a~~L-l~~G~~-V~~~~R~~~---~-~~~~~~~~~v~~v~~Dltd~~--~v~~a~~~~D~V  230 (437)
                      .+.+|||+|| |+||... ++.+ ...|++ |++++++.+   . +..+.++  +..+  |..+.+  ++.++-.++|+|
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG--a~~v--~~~~~~~~~i~~~~gg~Dvv  246 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD--ATYV--DSRQTPVEDVPDVYEQMDFI  246 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT--CEEE--ETTTSCGGGHHHHSCCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC--Cccc--CCCccCHHHHHHhCCCCCEE
Confidence            4479999999 9999999 8877 678997 999999775   3 3444453  3333  555422  244441258999


Q ss_pred             EEeccC
Q 013761          231 IYCATA  236 (437)
Q Consensus       231 Ih~Ag~  236 (437)
                      |.++|.
T Consensus       247 id~~g~  252 (357)
T 2b5w_A          247 YEATGF  252 (357)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999873

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.94  E-value=0.011  Score=59.63  Aligned_cols=73  Identities=12%  Similarity=0.110  Sum_probs=50.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh--cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE--NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~--~~D~VIh  232 (437)
                      .+.+|||+|| |+||...++.+...|+ +|++++++++. +..+.++... +  .|..+.+   .+.++..  ++|+||.
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~i~~~t~g~g~D~vid  288 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH-V--IDPTKENFVEAVLDYTNGLGAKLFLE  288 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-E--ECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-E--EcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence            4789999998 9999999998888999 89999887653 3334444322 1  3444433   3333333  4899999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       289 ~~g~  292 (404)
T 3ip1_A          289 ATGV  292 (404)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            9874

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.94  E-value=0.0059  Score=58.83  Aligned_cols=92  Identities=15%  Similarity=0.245  Sum_probs=54.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEE-EecCCcHHH---HhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLR-GYSVKA-LVRKADQEV---VDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~-~~R~~~~~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      |.+++|.|.||+|.+|+.+++.+.+. +++++. ++|+.+...   ..++. .+.  . ++.-.++++++++.+|+||.+
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~-g~~--~-gv~v~~dl~~ll~~~DVVIDf   80 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL-GKQ--T-GVALTDDIERVCAEADYLIDF   80 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT-TCC--C-SCBCBCCHHHHHHHCSEEEEC
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh-CCC--C-CceecCCHHHHhcCCCEEEEc
Confidence            44579999999999999999999875 677776 466533110   00110 000  0 222223455666778999887


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCcee
Q 013761          234 ATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLA  267 (437)
Q Consensus       234 Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~  267 (437)
                      ..     +        ..+...++.|.++|+.+.
T Consensus        81 T~-----p--------~a~~~~~~~al~~G~~vV  101 (272)
T 4f3y_A           81 TL-----P--------EGTLVHLDAALRHDVKLV  101 (272)
T ss_dssp             SC-----H--------HHHHHHHHHHHHHTCEEE
T ss_pred             CC-----H--------HHHHHHHHHHHHcCCCEE
Confidence            52     1        223445556666666543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.94  E-value=0.0082  Score=57.56  Aligned_cols=64  Identities=14%  Similarity=0.266  Sum_probs=47.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +|+|.|.|++|.+|..+++.|++.|++|++.+|+.+. +.....+  +     ++.+   ..++++.+|+||.+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g--~-----~~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG--I-----PLTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT--C-----CCCC---SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC--C-----CcCC---HHHHhcCCCEEEEcC
Confidence            3689999999999999999999999999999997652 2222222  1     2222   234667889999876

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.91  E-value=0.015  Score=55.96  Aligned_cols=57  Identities=18%  Similarity=0.261  Sum_probs=49.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +.|++++|.|+++-+|+.++..|+..|++|+++.++.                      ..+++.+..+|+||...|..
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t----------------------~~L~~~~~~ADIVI~Avg~p  204 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT----------------------KDIGSMTRSSKIVVVAVGRP  204 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SCHHHHHHHSSEEEECSSCT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------ccHHHhhccCCEEEECCCCC
Confidence            6899999999999999999999999999999987642                      23567788899999998753

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=95.90  E-value=0.017  Score=57.51  Aligned_cols=72  Identities=15%  Similarity=0.147  Sum_probs=48.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLML-RGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~----~~D~VIh~  233 (437)
                      .+.+|||+||+|+||...++.+.. .|++|++++++++. +..+.++....   .|..+ +..+.+.+    ++|+||.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~v---i~~~~-~~~~~v~~~~~~g~Dvvid~  246 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV---IDHSK-PLAAEVAALGLGAPAFVFST  246 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEE---ECTTS-CHHHHHHTTCSCCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEE---EeCCC-CHHHHHHHhcCCCceEEEEC
Confidence            467999999999999998887665 68999999987653 33445543322   24433 22222221    57999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       247 ~g  248 (363)
T 4dvj_A          247 TH  248 (363)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.84  E-value=0.0023  Score=62.67  Aligned_cols=70  Identities=30%  Similarity=0.373  Sum_probs=46.6

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH--HHHHHH-hcccEEEEecc
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC--TLKAAV-ENCNKIIYCAT  235 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~--~v~~a~-~~~D~VIh~Ag  235 (437)
                      +|||+||+|+||..+++.+...|++|++++++.+. +..+.++... ++  |..+.+  .+.++. .++|++|.++|
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~-v~--~~~~~~~~~~~~~~~~~~d~vid~~g  226 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASE-VI--SREDVYDGTLKALSKQQWQGAVDPVG  226 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSE-EE--EHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EE--ECCCchHHHHHHhhcCCccEEEECCc
Confidence            79999999999999999888899999999998653 3333443322 12  322211  011111 24799999987

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=95.79  E-value=0.03  Score=55.64  Aligned_cols=69  Identities=13%  Similarity=0.225  Sum_probs=53.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ||+|+|+|+ |.+|+.+++.|.+.|++|++++.+....... +.+  .++..|..|.+.+.++++++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~-~~~--~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQ-VAD--EQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGG-GSS--EEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-hCc--eEEECCCCCHHHHHHHHhcCCEEEec
Confidence            368999997 7899999999999999999998754321111 111  35678999999999999889998864

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.78  E-value=0.032  Score=54.25  Aligned_cols=96  Identities=18%  Similarity=0.221  Sum_probs=63.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH-H-HHhhCC------CCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ-E-VVDMLP------RSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~-~-~~~~~~------~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      |+|.|.|| |.+|..++..|+..|+  +|+++|++.+. + ....+.      ....+..   .|.    ++++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEEE
Confidence            47999998 9999999999999998  99999998652 1 111111      1223322   132    3578899999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .+++....+   ..+.+..|+.-...+++.+.++...
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~  109 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPD  109 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSS
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCC
Confidence            999864322   2346778888888888888776544

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.74  E-value=0.017  Score=53.97  Aligned_cols=70  Identities=19%  Similarity=0.290  Sum_probs=52.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      ++.+++|||.|| |-+|...++.|++.|++|++++.....+..... ...+.++..+..+.     .++++|.||-+
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~-----dL~~adLVIaA   98 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEE-----DLLNVFFIVVA   98 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGG-----GSSSCSEEEEC
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHh-----HhCCCCEEEEC
Confidence            478999999987 799999999999999999999987654322211 24577776666532     35678999854

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.71  E-value=0.024  Score=55.72  Aligned_cols=75  Identities=16%  Similarity=0.215  Sum_probs=50.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+.+|+|+|+ |++|...++.+... |.+|++++++++. +..+.++.... +..+-...+.+.++..  ++|++|.++|
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~v~~~t~g~g~d~v~d~~G  248 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAA-VKSGAGAADAIRELTGGQGATAVFDFVG  248 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEE-EECSTTHHHHHHHHHGGGCEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE-EcCCCcHHHHHHHHhCCCCCeEEEECCC
Confidence            4679999998 99999988877666 7899999988763 34455544322 2212112334445544  5799999987


Q ss_pred             C
Q 013761          236 A  236 (437)
Q Consensus       236 ~  236 (437)
                      .
T Consensus       249 ~  249 (345)
T 3jv7_A          249 A  249 (345)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.68  E-value=0.0067  Score=59.04  Aligned_cols=71  Identities=17%  Similarity=0.191  Sum_probs=47.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHH-hcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAV-ENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~-~~~D~VIh~Ag  235 (437)
                      ++ |||+||+|+||...++.+...|++|++++++++. +..+.++....+   |..+.+.++++. .++|++|.++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~~~~d~v~d~~g  220 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRIL---SRDEFAESRPLEKQLWAGAIDTVG  220 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEE---EGGGSSCCCSSCCCCEEEEEESSC
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEE---ecCCHHHHHhhcCCCccEEEECCC
Confidence            35 9999999999999999999999999999987663 334444433222   322222111111 24699999876

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.68  E-value=0.051  Score=53.17  Aligned_cols=98  Identities=17%  Similarity=0.231  Sum_probs=67.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH-H-----HHhhC---CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ-E-----VVDML---PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~-~-----~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++|++.+. +     .....   ...+.+.. |  +    .++++++|
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD   76 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD   76 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence            3469999999 9999999999988774  89999998641 1     01111   11334332 2  2    24588899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.+++.....   ..+.+..|..-...+++.+.++...
T Consensus        77 vViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~  116 (316)
T 1ldn_A           77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQ  116 (316)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCC
Confidence            999999875432   2346777877777888888776544

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=95.68  E-value=0.029  Score=55.73  Aligned_cols=73  Identities=15%  Similarity=0.172  Sum_probs=50.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC----H-HHHHHHHh-cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD----P-CTLKAAVE-NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd----~-~~v~~a~~-~~D~VI  231 (437)
                      .+.+|||+|+ |+||..+++.+...|+ +|++++++++. +..+.++... +  .|..+    . +.+.++.. ++|+||
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~~~~~~~~~g~D~vi  267 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD-F--VNPNDHSEPISQVLSKMTNGGVDFSL  267 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE-E--ECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCce-E--EeccccchhHHHHHHHHhCCCCCEEE
Confidence            4679999995 9999999998888998 89999887663 3344454321 1  34442    1 22333322 589999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .++|.
T Consensus       268 d~~g~  272 (374)
T 1cdo_A          268 ECVGN  272 (374)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99874

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.68  E-value=0.029  Score=56.32  Aligned_cols=73  Identities=14%  Similarity=0.126  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC----HHHHHHHHh--cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD----PCTLKAAVE--NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd----~~~v~~a~~--~~D~VI  231 (437)
                      .+.+|||.|+ |+||...++.+...|+ +|++++++.+. +..+.++.  .+  .|..+    .+.+.++..  ++|+||
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--~~--i~~~~~~~~~~~~~~~~~g~g~Dvvi  259 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF--ET--IDLRNSAPLRDQIDQILGKPEVDCGV  259 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC--EE--EETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC--cE--EcCCCcchHHHHHHHHhCCCCCCEEE
Confidence            4779999997 9999999988888898 89999987653 33444543  33  35544    334444443  589999


Q ss_pred             EeccCC
Q 013761          232 YCATAR  237 (437)
Q Consensus       232 h~Ag~~  237 (437)
                      .++|..
T Consensus       260 d~~g~~  265 (398)
T 2dph_A          260 DAVGFE  265 (398)
T ss_dssp             ECSCTT
T ss_pred             ECCCCc
Confidence            999853

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.64  E-value=0.0055  Score=60.33  Aligned_cols=96  Identities=14%  Similarity=0.166  Sum_probs=66.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHH---H--Hhh---CCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQE---V--VDM---LPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~---~--~~~---~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++|.|+|| |.+|..++..|+..+.  +|+++|++.+..   .  +..   ....+.+.. |  +    .++++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999999 9999999999998885  899999975421   1  111   112333332 2  2    34688999999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ..||....+   -.+.+..|..-...+++.+.++...
T Consensus        78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~  114 (318)
T 1ez4_A           78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFD  114 (318)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999875432   2357788998889999999888654

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=95.63  E-value=0.03  Score=55.70  Aligned_cols=73  Identities=15%  Similarity=0.084  Sum_probs=49.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC-----HHHHHHHHh-cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-----PCTLKAAVE-NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-----~~~v~~a~~-~~D~VI  231 (437)
                      .+.+|||+|+ |+||..+++.+...|+ +|++++++++. +..+.++... +  .|..+     .+.+.++.. ++|+||
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~~~~~~~~~g~D~vi  266 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE-C--VNPQDYKKPIQEVLTEMSNGGVDFSF  266 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE-E--ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCce-E--ecccccchhHHHHHHHHhCCCCcEEE
Confidence            4679999995 9999999998888998 89999987763 3344554322 1  34432     122333322 589999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .++|.
T Consensus       267 d~~g~  271 (374)
T 2jhf_A          267 EVIGR  271 (374)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99874

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.62  E-value=0.051  Score=53.10  Aligned_cols=96  Identities=15%  Similarity=0.115  Sum_probs=69.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH--HHhhC------CCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE--VVDML------PRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~--~~~~~------~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++|.|+|| |.+|..++..|+..+  .+|+++|++.+..  ....+      ...+.+.. |  +    .++++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            48999998 999999999999887  6899999975421  11111      12334332 2  3    34588999999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ..||....+   ..+.+..|..-...+++.+.++..+
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~  109 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPE  109 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCC
Confidence            999975433   2457788988888999988887655

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=95.61  E-value=0.021  Score=56.90  Aligned_cols=73  Identities=11%  Similarity=0.145  Sum_probs=50.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCC--C---HHHHHHHHh-cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVG--D---PCTLKAAVE-NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dlt--d---~~~v~~a~~-~~D~VI  231 (437)
                      .+.+|||+|+ |+||...++.+...|+ +|++++++++. +..+.++... +  .|..  +   .+.+.++.. ++|+||
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-v--i~~~~~~~~~~~~i~~~~~gg~D~vi  268 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE-F--VNPKDHDKPIQEVIVDLTDGGVDYSF  268 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE-E--ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE-E--EccccCchhHHHHHHHhcCCCCCEEE
Confidence            4679999998 9999999998888998 89999988764 3444554332 1  3433  1   223333322 589999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .++|.
T Consensus       269 d~~g~  273 (378)
T 3uko_A          269 ECIGN  273 (378)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99874

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.60  E-value=0.013  Score=57.48  Aligned_cols=74  Identities=19%  Similarity=0.165  Sum_probs=47.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEE------ecCC-CHHHHHHHHhcccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVL------GDVG-DPCTLKAAVENCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~------~Dlt-d~~~v~~a~~~~D~VI  231 (437)
                      +.|+|.|.|+ |.+|..++..|++.|++|++++|+.+. +...... .+.+..      ..+. ..++++++++.+|+||
T Consensus         3 ~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi   80 (359)
T 1bg6_A            3 ESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG-AIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   80 (359)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT-SEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC-CeEEeccccccccccceecCCHHHHHhcCCEEE
Confidence            3468999986 999999999999999999999997652 1121110 111110      1110 1123456677899999


Q ss_pred             Eecc
Q 013761          232 YCAT  235 (437)
Q Consensus       232 h~Ag  235 (437)
                      .+..
T Consensus        81 ~~v~   84 (359)
T 1bg6_A           81 IVVP   84 (359)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            8874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=95.58  E-value=0.033  Score=55.35  Aligned_cols=73  Identities=14%  Similarity=0.138  Sum_probs=50.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC----H-HHHHHHHh-cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD----P-CTLKAAVE-NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd----~-~~v~~a~~-~~D~VI  231 (437)
                      .+.+|||+|+ |+||..+++.+...|+ +|++++++++. +..+.++... +  .|..+    . +.+.++.. ++|+||
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-v--i~~~~~~~~~~~~v~~~~~~g~Dvvi  270 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD-C--LNPRELDKPVQDVITELTAGGVDYSL  270 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE-E--ECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcE-E--EccccccchHHHHHHHHhCCCccEEE
Confidence            4679999996 9999999998888998 89999887763 3344554332 1  34432    1 22333322 589999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .++|.
T Consensus       271 d~~G~  275 (376)
T 1e3i_A          271 DCAGT  275 (376)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99874

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=95.58  E-value=0.011  Score=58.90  Aligned_cols=94  Identities=16%  Similarity=0.166  Sum_probs=56.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-HHHhhCCCCeEE-EEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-EVVDMLPRSVEI-VLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~~~~~~~~~v~~-v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +++|.|.||+|.||+.+++.|+++. .+|+++.+..+. .........+.- ...++.+.+   + +.++|+||.+++..
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~~   79 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPHG   79 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCcH
Confidence            4689999999999999999998775 477777654321 111111000000 011233332   2 47899999998643


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCceeeeec
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRA  271 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~  271 (437)
                      .             +..++..+.+.|+++..+++
T Consensus        80 ~-------------s~~~a~~~~~aG~~VId~Sa  100 (345)
T 2ozp_A           80 V-------------FAREFDRYSALAPVLVDLSA  100 (345)
T ss_dssp             H-------------HHHTHHHHHTTCSEEEECSS
T ss_pred             H-------------HHHHHHHHHHCCCEEEEcCc
Confidence            2             23456666778887655543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.55  E-value=0.078  Score=52.05  Aligned_cols=98  Identities=9%  Similarity=0.131  Sum_probs=66.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH-----HHhh----CCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE-----VVDM----LPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~-----~~~~----~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      +++|.|.|| |.+|..++..|+..|+ +|+++|++++..     .+..    ......+...  +|   . ++++++|+|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD~V   76 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLAGADVV   76 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEE
Confidence            468999998 9999999999999998 999999987621     0111    1112222110  22   2 468899999


Q ss_pred             EEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.++|.....        ..+.+..|+.-...+++.+.+....
T Consensus        77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~  119 (322)
T 1t2d_A           77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN  119 (322)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999865321        2346777877777888887776544

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.51  E-value=0.07  Score=51.81  Aligned_cols=96  Identities=9%  Similarity=0.201  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc------------------H-----HHHhhCCC--CeEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD------------------Q-----EVVDMLPR--SVEIVLG  212 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~------------------~-----~~~~~~~~--~v~~v~~  212 (437)
                      +..++|+|.|+ |++|.++++.|+..|. +++++|.+.-                  .     +.+..+..  .++.+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            56789999977 8999999999999994 7888887641                  0     11122222  4566667


Q ss_pred             cCCCHHHHHHHH-----------hcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCcee
Q 013761          213 DVGDPCTLKAAV-----------ENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLA  267 (437)
Q Consensus       213 Dltd~~~v~~a~-----------~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~  267 (437)
                      ++++.+.+++++           +++|+||.+.-            |+..-+.+.++|.+.++.+.
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D------------n~~~R~~in~~c~~~~~Pli  166 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD------------NFEARMTINTACNELGQTWM  166 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS------------SHHHHHHHHHHHHHHTCCEE
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc------------chhhhhHHHHHHHHhCCCEE
Confidence            888777777766           47899997652            11222345667777775543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.47  E-value=0.11  Score=51.40  Aligned_cols=98  Identities=14%  Similarity=0.178  Sum_probs=69.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HH--Hhh---CCCCeEEE-EecCCCHHHHHHHHhccc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EV--VDM---LPRSVEIV-LGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~--~~~---~~~~v~~v-~~Dltd~~~v~~a~~~~D  228 (437)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++|++.+.   ..  +..   ......+. ..|.   +    .++++|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCCC
Confidence            3568999999 9999999999999996  89999997641   11  111   11122222 2333   1    277899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||-+||....+   -.+.+..|..-...+++.+.++...
T Consensus        92 iVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~  131 (330)
T 3ldh_A           92 LVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPD  131 (330)
T ss_dssp             EEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCC
Confidence            999999975432   3467888988888899888887654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.45  E-value=0.0072  Score=58.07  Aligned_cols=71  Identities=15%  Similarity=0.131  Sum_probs=46.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEE--------ecCCCHHHHHHHHhcccEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVL--------GDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~--------~Dltd~~~v~~a~~~~D~VI  231 (437)
                      +|+|.|.|+ |.+|..++..|++.|++|++++|+.+. +.+...  .+....        .++++.+++.++++.+|+||
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi   79 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN--GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLII   79 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH--CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC--CEEEEeCCCeeEecceeecchhhcccCCCCCEEE
Confidence            368999986 999999999999999999999997652 112111  122211        12223333333445789999


Q ss_pred             Eec
Q 013761          232 YCA  234 (437)
Q Consensus       232 h~A  234 (437)
                      -+.
T Consensus        80 ~~v   82 (316)
T 2ew2_A           80 ALT   82 (316)
T ss_dssp             ECS
T ss_pred             EEe
Confidence            876

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.44  E-value=0.011  Score=57.64  Aligned_cols=97  Identities=15%  Similarity=0.092  Sum_probs=66.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCcH-HHH----hhC----CCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKADQ-EVV----DML----PRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~~-~~~----~~~----~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|.|| |.+|..++..|+..  |++|+++|++++. +..    ...    .....+...  +|.   ++ ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCEE
Confidence            47999998 99999999999985  7999999998762 111    110    111122111  232   23 7789999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.+++.....   ..+++..|+.-...+++.+.++...
T Consensus        74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~  111 (310)
T 1guz_A           74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKN  111 (310)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999864322   3457788888888888888777543

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.43  E-value=0.038  Score=53.91  Aligned_cols=69  Identities=13%  Similarity=0.151  Sum_probs=52.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+++|.|.|. |.||+.+++.|...|++|++.+|+.+.+.....  .+..     .   +++++++.+|+|+.+....
T Consensus       139 ~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~--g~~~-----~---~l~ell~~aDvV~l~~p~~  207 (307)
T 1wwk_A          139 ELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNEERAKEV--NGKF-----V---DLETLLKESDVVTIHVPLV  207 (307)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHT--TCEE-----C---CHHHHHHHCSEEEECCCCS
T ss_pred             ccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHhhc--Cccc-----c---CHHHHHhhCCEEEEecCCC
Confidence            478999999975 999999999999999999999998764322232  2221     1   3556788899999887543

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.43  E-value=0.031  Score=52.34  Aligned_cols=39  Identities=26%  Similarity=0.273  Sum_probs=32.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ  197 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~  197 (437)
                      .+.+++|.|.| +|.+|.++++.|++.|++|++.+|+.+.
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            36778999996 7999999999999999999999998653

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=95.39  E-value=0.032  Score=55.39  Aligned_cols=73  Identities=15%  Similarity=0.100  Sum_probs=49.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC-----HHHHHHHHh-cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-----PCTLKAAVE-NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-----~~~v~~a~~-~~D~VI  231 (437)
                      .+.+|||+|+ |+||..+++.+...|+ +|++++++++. +..+.++... +  .|..+     .+.+.++.. ++|+||
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-v--i~~~~~~~~~~~~i~~~t~gg~Dvvi  266 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE-C--LNPKDYDKPIYEVICEKTNGGVDYAV  266 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSE-E--ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE-E--EecccccchHHHHHHHHhCCCCCEEE
Confidence            4679999995 9999999988888898 89999887663 3444554332 2  24332     122333322 589999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .++|.
T Consensus       267 d~~g~  271 (373)
T 1p0f_A          267 ECAGR  271 (373)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99874

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.38  E-value=0.025  Score=54.79  Aligned_cols=59  Identities=24%  Similarity=0.348  Sum_probs=50.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.+++++|.|+++-+|+.+++.|+..|++|+++.+..                      .++.+.+..+|+||...|..
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------~~L~~~~~~ADIVI~Avg~p  213 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT----------------------KNLRHHVENADLLIVAVGKP  213 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC----------------------SCHHHHHHHCSEEEECSCCT
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHhccCCEEEECCCCc
Confidence            37899999999999999999999999999999987543                      23567788899999998854


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       214 ~  214 (288)
T 1b0a_A          214 G  214 (288)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.38  E-value=0.023  Score=56.43  Aligned_cols=73  Identities=12%  Similarity=0.127  Sum_probs=49.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh-cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE-NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~-~~D~VIh~  233 (437)
                      .+.+|||+|+ |+||..+++.+...|+ +|++++++++. +..+.++... +  .|..+.+   .+.++.. ++|+||.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-v--i~~~~~~~~~~~~~~~~gg~D~vid~  265 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH-V--INSKTQDPVAAIKEITDGGVNFALES  265 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE-E--EETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCE-E--ecCCccCHHHHHHHhcCCCCcEEEEC
Confidence            4679999995 9999999988888898 69999887653 2333443322 2  2444332   3333332 58999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       266 ~g~  268 (371)
T 1f8f_A          266 TGS  268 (371)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            873

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=95.36  E-value=0.027  Score=55.93  Aligned_cols=73  Identities=14%  Similarity=0.133  Sum_probs=49.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC-----HHHHHHHHh-cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-----PCTLKAAVE-NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-----~~~v~~a~~-~~D~VI  231 (437)
                      .+.+|||+|+ |+||..+++.+...|+ +|++++++++. +..+.++... +  .|..+     .+.+.++.. ++|+||
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~~v~~~~~~g~D~vi  265 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE-C--INPQDFSKPIQEVLIEMTDGGVDYSF  265 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE-E--ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce-E--eccccccccHHHHHHHHhCCCCCEEE
Confidence            4679999996 9999999998888898 89999887663 3334443321 1  24432     122333322 589999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .++|.
T Consensus       266 d~~g~  270 (373)
T 2fzw_A          266 ECIGN  270 (373)
T ss_dssp             ECSCC
T ss_pred             ECCCc
Confidence            99874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.32  E-value=0.046  Score=51.70  Aligned_cols=94  Identities=16%  Similarity=0.194  Sum_probs=60.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc-------------------H-H----HHhhCCCC--eEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD-------------------Q-E----VVDMLPRS--VEIVL  211 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~-------------------~-~----~~~~~~~~--v~~v~  211 (437)
                      +.+++|+|.|+ |++|+++++.|+..|. +++++|++.-                   . +    .+..+...  +..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            45679999988 7799999999999996 7888876531                   0 0    11112223  44444


Q ss_pred             ecCCCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          212 GDVGDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       212 ~Dltd~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                      .+++ .+.+.++++++|+||.+..    ...        .-..+.+++.+.++.+
T Consensus       105 ~~~~-~~~~~~~~~~~DvVi~~~d----~~~--------~r~~l~~~~~~~~~p~  146 (251)
T 1zud_1          105 QRLT-GEALKDAVARADVVLDCTD----NMA--------TRQEINAACVALNTPL  146 (251)
T ss_dssp             SCCC-HHHHHHHHHHCSEEEECCS----SHH--------HHHHHHHHHHHTTCCE
T ss_pred             ccCC-HHHHHHHHhcCCEEEECCC----CHH--------HHHHHHHHHHHhCCCE
Confidence            4453 4677888899999998753    111        1234566777766553

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.32  E-value=0.018  Score=56.83  Aligned_cols=73  Identities=14%  Similarity=0.150  Sum_probs=49.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHH---HHHHHHh--cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPC---TLKAAVE--NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~---~v~~a~~--~~D~VIh  232 (437)
                      .+.+|||+|+ |+||...++.+...|+ +|++++++++. +..+.++... +  .|..+.+   .+.++..  ++|+||.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~v~~~t~g~g~D~v~d  241 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD-I--INYKNGDIVEQILKATDGKGVDKVVI  241 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE-E--ECGGGSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce-E--EcCCCcCHHHHHHHHcCCCCCCEEEE
Confidence            4678999985 9999999998888998 79999887653 3344444322 1  2433332   3334433  4799999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       242 ~~g~  245 (352)
T 3fpc_A          242 AGGD  245 (352)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            9875

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.30  E-value=0.034  Score=59.04  Aligned_cols=35  Identities=31%  Similarity=0.458  Sum_probs=29.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRK  194 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~  194 (437)
                      +.+++|+|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus       325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34569999977 8899999999999996 78888764

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.30  E-value=0.035  Score=55.79  Aligned_cols=98  Identities=13%  Similarity=0.084  Sum_probs=65.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--e---EEEEecCCc--H-----HHH--hhCC-CCeEEEEecCCCHHHHHHHHh
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY--S---VKALVRKAD--Q-----EVV--DMLP-RSVEIVLGDVGDPCTLKAAVE  225 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~--~---V~~~~R~~~--~-----~~~--~~~~-~~v~~v~~Dltd~~~v~~a~~  225 (437)
                      ..+|.|+||+|.||.+++-.|+..+.  +   |.+.+.+.+  .     ...  .... .-..-+  .+.+  ...+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~--~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGI--DPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEES--CHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEec--CCHHHhC
Confidence            46899999999999999999998773  2   666544332  1     111  1111 111111  1221  2357889


Q ss_pred             cccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 NCNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      ++|+||-.||....+   -.+.++.|..-...+.+++.++
T Consensus       108 daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~  147 (375)
T 7mdh_A          108 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV  147 (375)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999975432   3568999999888998888775

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=95.29  E-value=0.019  Score=57.45  Aligned_cols=93  Identities=15%  Similarity=0.261  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-HHHh-h---CCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-EVVD-M---LPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~~~~-~---~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      |++++|.|.||+|.||+.+++.|.++. .+|+++.+..+. .... .   +...+   ..|+.-.+  ++.++++|+||.
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~   88 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFC   88 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEE
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEE
Confidence            344689999999999999999999876 477777654321 1111 1   11111   13433222  345578999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHHHHHHhcCCceeeee
Q 013761          233 CATARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLR  270 (437)
Q Consensus       233 ~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~  270 (437)
                      |++....             ...+..+ +.|+++.-++
T Consensus        89 atp~~~s-------------~~~a~~~-~aG~~VId~s  112 (359)
T 1xyg_A           89 CLPHGTT-------------QEIIKEL-PTALKIVDLS  112 (359)
T ss_dssp             CCCTTTH-------------HHHHHTS-CTTCEEEECS
T ss_pred             cCCchhH-------------HHHHHHH-hCCCEEEECC
Confidence            9864321             2344555 6676644443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.26  E-value=0.0069  Score=58.20  Aligned_cols=36  Identities=25%  Similarity=0.373  Sum_probs=32.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ..++|.|.|+ |.+|+.++..|+..|++|++.+|+.+
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~   38 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTD   38 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            3568999976 99999999999999999999999865

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.26  E-value=0.053  Score=54.29  Aligned_cols=73  Identities=18%  Similarity=0.105  Sum_probs=51.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCH----HHHHHHHh--cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP----CTLKAAVE--NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~----~~v~~a~~--~~D~VI  231 (437)
                      .+.+|||.|+ |+||...++.+...|+ +|++++++.+. +..+.++.  ..  .|..+.    +.+.++..  ++|+||
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa--~~--i~~~~~~~~~~~v~~~t~g~g~Dvvi  259 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF--EI--ADLSLDTPLHEQIAALLGEPEVDCAV  259 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC--EE--EETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC--cE--EccCCcchHHHHHHHHhCCCCCCEEE
Confidence            4679999995 9999999988888998 68888887653 34445543  32  354432    34444443  589999


Q ss_pred             EeccCC
Q 013761          232 YCATAR  237 (437)
Q Consensus       232 h~Ag~~  237 (437)
                      .++|..
T Consensus       260 d~~G~~  265 (398)
T 1kol_A          260 DAVGFE  265 (398)
T ss_dssp             ECCCTT
T ss_pred             ECCCCc
Confidence            999853

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.23  E-value=0.053  Score=53.18  Aligned_cols=69  Identities=19%  Similarity=0.226  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ..+.+|+|.|.|. |.||+.+++.|...|++|++.+|+....      ..+....    ..++++++++.+|+|+.+.-.
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~------~~~~~~~----~~~~l~ell~~aDiV~l~~Pl  203 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSW------PGVESYV----GREELRAFLNQTRVLINLLPN  203 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCC------TTCEEEE----SHHHHHHHHHTCSEEEECCCC
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhh------hhhhhhc----ccCCHHHHHhhCCEEEEecCC
Confidence            3478999999976 9999999999999999999999976521      1222111    236788999999999988754

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.23  E-value=0.096  Score=51.02  Aligned_cols=96  Identities=14%  Similarity=0.123  Sum_probs=64.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH-H--Hh--h------CCCCeEEEEecCCCHHHHHHHHhccc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE-V--VD--M------LPRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~-~--~~--~------~~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      .++|.|.|| |.+|..++..|+..|+ +|++.+++.+.. .  ..  .      ....+...    +|.    ++++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~----~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT----DDY----ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----SCG----GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC----CCH----HHhCCCC
Confidence            468999998 9999999999999998 999999987621 1  00  0      01122211    222    3578899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.++|.....   ..+.+..|..-...+++.+.++...
T Consensus        75 iVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~  114 (317)
T 2ewd_A           75 VVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPN  114 (317)
T ss_dssp             EEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCC
Confidence            999999865432   2345566666667777777665433

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.20  E-value=0.11  Score=51.00  Aligned_cols=96  Identities=16%  Similarity=0.199  Sum_probs=66.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHHH-----Hhh----C--CCCeEEEEecCCCHHHHHHHHhccc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQEV-----VDM----L--PRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~~-----~~~----~--~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      .++|.|.|| |.+|..++..|+..|+ +|++.|++.+...     +..    .  ...+... .   |   . ++++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-N---N---Y-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-C---C---H-HHHCCCC
Confidence            468999998 9999999999999998 9999999876211     010    0  1122221 2   2   2 4678899


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||-++|.....   -.+.+..|+.-...+++.+.+....
T Consensus        85 ~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~  124 (328)
T 2hjr_A           85 VVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPN  124 (328)
T ss_dssp             EEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCC
Confidence            999999864321   2346677877777888877776544

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.14  E-value=0.017  Score=55.96  Aligned_cols=67  Identities=16%  Similarity=0.258  Sum_probs=45.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+|||+|| |++|...++.+...|++|++++ +.+ .+..+.++.  ..+. |  |.+.+   -.++|++|.++|.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa--~~v~-~--d~~~v---~~g~Dvv~d~~g~  209 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGV--RHLY-R--EPSQV---TQKYFAIFDAVNS  209 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTE--EEEE-S--SGGGC---CSCEEEEECC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCC--CEEE-c--CHHHh---CCCccEEEECCCc
Confidence            4779999999 9999999998888999999999 544 334444432  2222 3  32222   3467999999874

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.11  E-value=0.058  Score=52.75  Aligned_cols=68  Identities=22%  Similarity=0.162  Sum_probs=51.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+++|.|.|. |.||+.+++.|...|++|++.+|+.+.......  .+..     .   +++++++.+|+|+.+...
T Consensus       139 ~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~--g~~~-----~---~l~ell~~aDvVvl~~P~  206 (313)
T 2ekl_A          139 ELAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIREKAEKI--NAKA-----V---SLEELLKNSDVISLHVTV  206 (313)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHT--TCEE-----C---CHHHHHHHCSEEEECCCC
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchhHHHhc--Ccee-----c---CHHHHHhhCCEEEEeccC
Confidence            478999999975 999999999999999999999998764322222  2221     1   345678889999988754

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.07  E-value=0.048  Score=54.23  Aligned_cols=69  Identities=16%  Similarity=0.186  Sum_probs=52.2

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ..+.+|++.|.|- |.||+.++++|...|++|++.+|+........   .+.++       ++++++++.+|+|+.+.-.
T Consensus       169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---g~~~~-------~~l~ell~~sDvV~l~~Pl  237 (345)
T 4g2n_A          169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHALEE---GAIYH-------DTLDSLLGASDIFLIAAPG  237 (345)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT---TCEEC-------SSHHHHHHTCSEEEECSCC
T ss_pred             cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhhhc---CCeEe-------CCHHHHHhhCCEEEEecCC
Confidence            3488999999975 99999999999999999999999764211111   22221       3567889999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	437
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-11
d1v0aa1	167	b.18.1.30 (A:4-170) Endoglucanase H {Clostridium t	3e-07
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-07
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-06
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-06
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-06
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-06
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-06
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	5e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-06
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-05
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-05
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-05
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-05
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-05
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-05
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-05
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-05
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-05
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-05
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-05
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-05
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-05
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-05
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	9e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	9e-05
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-04
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-04
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-04
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-04
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-04
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-04
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-04
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-04
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	5e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	5e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	5e-04
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-04
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	6e-04
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	7e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	8e-04
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	0.001
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.001
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.001
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	0.002
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.002
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	0.003

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 62.7 bits (151), Expect = 2e-11
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRS--VEIVLGDVGDP 217
           Q  T+ VVGAT R G  +IR     G+ V+A V      + + L     V +  G + + 
Sbjct: 2   QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 61

Query: 218 CTLKAAVENCNKIIYCAT 235
             L   +     + +  T
Sbjct: 62  VPLMDTLFEGAHLAFINT 79

>d1v0aa1 b.18.1.30 (A:4-170) Endoglucanase H {Clostridium thermocellum [TaxId: 1515]} Length = 167

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: CBM11
domain: Endoglucanase H
species: Clostridium thermocellum [TaxId: 1515]

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 17/143 (11%)

Query: 301 FQDVVAFKYDAGMDAKFELSETGDAVFSG----YVFTRGGYVELSKKLSLPLGCTLDRYE 356
           F+ V+ +   +G  AK           +G    Y  T  GY      L         ++ 
Sbjct: 10  FEGVLNWGSYSGEGAKVSTKIVSGKTGNGMEVSYTGTTDGYWGTVYSLP---DGDWSKWL 66

Query: 357 GLVLSV---GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRP---- 409
            +   +    G+      ++           + +    +    +  + +PFSSFR     
Sbjct: 67  KISFDIKSVDGSANEIRFMIAEKSINGVGDGEHWVYSITPDSSWKTIEIPFSSFRRRLDY 126

Query: 410 ---VKPDDPPMDPFLVHTMTIRF 429
               +     +D   + ++   +
Sbjct: 127 QPPGQDMSGTLDLDNIDSIHFMY 149

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA 222
            + + GAT + G   + + +  GY V  LVR + + +    PR   +V+GDV     +  
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR-LPSEGPRPAHVVVGDVLQAADVDK 63

Query: 223 AVENCNKIIYCATARSTITGDLFRVDYQ 250
            V   + +I     R+ ++      +  
Sbjct: 64  TVAGQDAVIVLLGTRNDLSPTTVMSEGA 91

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 48.2 bits (113), Expect = 9e-07
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPR-------SVEIVLG 212
           + + VL+VG T  IG+ ++   +  G+    L R      +D +           +++  
Sbjct: 2   KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61

Query: 213 DVGDPCTLKAAVENCNKIIYCA 234
            + D   L  A++  + +I   
Sbjct: 62  SLDDHQRLVDALKQVDVVISAL 83

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 47.5 bits (111), Expect = 1e-06
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 9/86 (10%)

Query: 155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEV-------VDMLPRSV 207
            +P  + + VLV GA   +   V+ +L+  GY V+   R A +              R  
Sbjct: 7   VLP--EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFE 64

Query: 208 EIVLGDVGDPCTLKAAVENCNKIIYC 233
             V+ D+         ++    + + 
Sbjct: 65  TAVVEDMLKQGAYDEVIKGAAGVAHI 90

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.4 bits (108), Expect = 3e-06
 Identities = 18/77 (23%), Positives = 35/77 (45%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
            TVLV GA+ R G+IV +KL        A       +  + +    ++ +GD+ D  ++ 
Sbjct: 4   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSIN 63

Query: 222 AAVENCNKIIYCATARS 238
            A +  + ++   +A  
Sbjct: 64  PAFQGIDALVILTSAVP 80

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 23/123 (18%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
           +   VL+ G  S +GR ++ + +  G  V  L + A+   E+      +V  ++GDV   
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSL 63

Query: 218 CTLKAAVE-------------NCNKIIYCATARSTITG--------DLFRVDYQGVYNVT 256
              K A                   I   +TA   +          ++F ++ +G  +  
Sbjct: 64  EDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAV 123

Query: 257 KAF 259
           KA 
Sbjct: 124 KAC 126

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 46.3 bits (108), Expect = 3e-06
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--------QEVVDMLPRSVEIVLGD 213
           + +L++GAT  IGR V +  +  G+    LVR++         Q +         IV G 
Sbjct: 4   SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63

Query: 214 VGDPCTLKAAVENCNKIIYC 233
           + D  +L  AV+N + +I  
Sbjct: 64  IDDHASLVEAVKNVDVVIST 83

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 45.7 bits (108), Expect = 3e-06
 Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 18/118 (15%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
           Q    LV G  S +G  V++ L+  G  V          Q++   L      V  DV   
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSE 64

Query: 218 CTLKAAVENCNKI-----IYCATARSTITGDL-----------FRVDYQGVYNVTKAF 259
                 +    +      +    A   + GD+            +++ + V+   +  
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.4 bits (107), Expect = 4e-06
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 15/111 (13%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTL 220
             LV GA   IGR  ++ L   G  V A+ R       +    P  +E V  D+GD    
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDAT 65

Query: 221 KAAVENCNKI-IYCATARSTITGDL-----------FRVDYQGVYNVTKAF 259
           + A+     + +    A   I               F V+ + V+ V++  
Sbjct: 66  EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMV 116

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 45.1 bits (106), Expect = 5e-06
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
              T+LV GA S IGR  +      G S+ A+ R+     E V  L      V+ DV DP
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDP 63

Query: 218 CTLKAAVENC 227
             ++A     
Sbjct: 64  KAVEAVFAEA 73

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 44.9 bits (105), Expect = 7e-06
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVK--ALVRKAD--QEVVDMLPRSVEIVLGDVGDPC 218
           +V+V GA   IG  ++++L+         A  R  +   E+  +    V ++   V    
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDK 64

Query: 219 TLKAAVENCNKII 231
           +L   V    +I+
Sbjct: 65  SLDTFVSKVGEIV 77

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 15/118 (12%), Positives = 27/118 (22%), Gaps = 18/118 (15%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
              TV++ G    +G    R+ +  G  V       +        L  +      DV   
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE 63

Query: 218 CTLKAAVEN-----------CNKIIYCATARSTITGD-----LFRVDYQGVYNVTKAF 259
              +  V              N                    +  ++  GV+   K  
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTV 121

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 15/112 (13%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDML-----PRSVEIVLGDVG 215
             LV GA   IGR     L+L+G  V  +    +   +    L     P+    +  DV 
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 216 DPCTLKAAVENCNK-------IIYCATARSTITGDL-FRVDYQGVYNVTKAF 259
           D   L+               ++  A   +    +   +++   V + T   
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLG 116

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 14/126 (11%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTL 220
            V+V G    IG  ++R  +  G  V    +     + +   LP     +L DV     +
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDV 66

Query: 221 KAAVENCNK-------IIYCA--TARSTITGDLFRVDYQGVY--NVTKAFQDFNNKLAQL 269
           K  V    +       ++  A          +     ++ +   N+   +      L  L
Sbjct: 67  KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYL 126

Query: 270 RAGKSS 275
           R  + +
Sbjct: 127 RKSQGN 132

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 15/117 (12%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTL 220
            VLV GA   IGR  ++ L   G  V A+ R       +V   P  +E V  D+GD    
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEAT 67

Query: 221 KAAVENCNKIIYCATARSTITG------------DLFRVDYQGVYNVTKAFQDFNNK 265
           + A+ +   +       +                  F V+ + V  V++        
Sbjct: 68  ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIA 124

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 2/72 (2%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
              T L+ G+   IGR      +  G  V       +  +     +  +   +  DV D 
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQ 63

Query: 218 CTLKAAVENCNK 229
            ++   V     
Sbjct: 64  ASIDRCVAELLD 75

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 21/118 (17%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDVGDP 217
            VL+ GA   IGR+   +       +          +E           V   + D  + 
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 68

Query: 218 CTLKAAVENCNKI-----IYCATARSTITGD-----------LFRVDYQGVYNVTKAF 259
             + ++ +          I    A    T D            F V+    +  TKAF
Sbjct: 69  EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAF 126

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 19/125 (15%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDM---LPRSVEIVLGDVGD 216
           ++   ++ G  + IGR +  +  + G  +         E       L R V  V  DV  
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ 63

Query: 217 PCTLKAAVENCNKI-----IYCATARSTITGDL-----------FRVDYQGVYNVTKAFQ 260
           P  ++A  +          I    A                   F ++    + + KAF 
Sbjct: 64  PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 123

Query: 261 DFNNK 265
               +
Sbjct: 124 PGMKR 128

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
                LV G    +G   +R ++  G  V       +  + +   L  +   V  DV  P
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQP 64

Query: 218 CTLKAAVENC 227
              KAAV+  
Sbjct: 65  AQWKAAVDTA 74

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 23/123 (18%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDML-----PRSVEIVLG 212
           ++   LV GA+  IG  V R L+ +G  V    R     +E+         P ++     
Sbjct: 9   RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRC 68

Query: 213 DVGDPCTLKAAVENCNKI-----IYCATARSTITG-----------DLFRVDYQGVYNVT 256
           D+ +   + +             I    A                 D+F V+   +   T
Sbjct: 69  DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT 128

Query: 257 KAF 259
           +  
Sbjct: 129 REA 131

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 28/134 (20%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDML------PRSVEIVL 211
            N TV++ G+++ IGR         G +V    R ++  +E   ++       + V  V+
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 212 GDVGDPCTLKAAVENCNKI-----IYCATARSTITGDL---------------FRVDYQG 251
            DV         + +  K      +    A + I                    +++ Q 
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 252 VYNVTKAFQDFNNK 265
           V  +TK  +     
Sbjct: 124 VIEMTKKVKPHLVA 137

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 42.8 bits (100), Expect = 3e-05
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 6/76 (7%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD------QEVVDMLPRSVEIVLGD 213
            N T++V G    IG    R +   G +V  + R A       ++V        +    D
Sbjct: 8   VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD 67

Query: 214 VGDPCTLKAAVENCNK 229
           V +   +   ++  + 
Sbjct: 68  VSNTDIVTKTIQQIDA 83

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 42.7 bits (100), Expect = 4e-05
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDML--PRSVEIVLGDVG 215
           Q+   ++ G    IG    +  +  G  V       D  Q+V + +  P  +  V  DV 
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVT 64

Query: 216 DPCTLKAAVENC 227
               ++  V+  
Sbjct: 65  KDEDVRNLVDTT 76

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 5/72 (6%)

Query: 161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDVG 215
           N   LV GA   IGR + + L      V  + R       VVD +           GDV 
Sbjct: 10  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS 69

Query: 216 DPCTLKAAVENC 227
               +   +   
Sbjct: 70  KKEEISEVINKI 81

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 42.4 bits (99), Expect = 6e-05
 Identities = 23/89 (25%), Positives = 31/89 (34%), Gaps = 14/89 (15%)

Query: 155 AIPGA--------QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---QEVVDML 203
           AIPG         +    LV GA   IGR +  +L  RG  V      +    +EVV  +
Sbjct: 4   AIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI 63

Query: 204 P---RSVEIVLGDVGDPCTLKAAVENCNK 229
                    V  +VG    +    E   K
Sbjct: 64  KKNGSDAACVKANVGVVEDIVRMFEEAVK 92

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 41.9 bits (98), Expect = 8e-05
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 8/74 (10%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDML------PRSVEIVL 211
              +V++ G+++ IGR         G  V    R  D  +E    +         +  V+
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 212 GDVGDPCTLKAAVE 225
            DV +       + 
Sbjct: 63  ADVTEASGQDDIIN 76

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.9 bits (97), Expect = 9e-05
 Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 1/95 (1%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCT 219
           +N  + + GA   I   + R+L   G+ V A   K ++ + +      E  L D+     
Sbjct: 14  ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMEN 72

Query: 220 LKAAVENCNKIIYCATARSTITGDLFRVDYQGVYN 254
                E  + +   A     +             N
Sbjct: 73  CLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNN 107

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.1 bits (98), Expect = 9e-05
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 17/120 (14%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPR----------SVEIVLG 212
             L+ G T + G  +   L+ +GY V  + R+A     + +               +  G
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 213 DVGDPCTLKAAVENCN-KIIYCATARSTITG------DLFRVDYQGVYNVTKAFQDFNNK 265
           D+ D   L   +       +Y   A S +            VD  G   + +A +    +
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 19/128 (14%), Positives = 36/128 (28%), Gaps = 28/128 (21%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDML------PRSVEIVL 211
                ++ G+++ IGR         G  V    R A+  +E    +       ++V  V+
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 212 GDVGDPCTLKAAVE-------------NCNKIIYCATARSTITG-------DLFRVDYQG 251
            DV         +              N        +   T T            ++ + 
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 252 VYNVTKAF 259
           V  +TK  
Sbjct: 124 VIALTKKA 131

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 1e-04
 Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD------QEVVDMLPRSVEIVLGD 213
           Q     + G  + +G+ +   L   G       RK D      +++       V  +  D
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCD 83

Query: 214 VGDPCTLKAAVENCNK 229
           V DP  ++  V    K
Sbjct: 84  VRDPDMVQNTVSELIK 99

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 5/75 (6%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDV 214
                ++ GA + IG+ +       G SV      AD    VVD +            D+
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI 69

Query: 215 GDPCTLKAAVENCNK 229
                L A  +    
Sbjct: 70  TSEQELSALADFAIS 84

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSV-------KALVRKADQEVVDMLPRSVEIVLG 212
           +    +V G+TS IG  +   L  +G  +        A + K    +       V     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 213 DVGDPCTLKAAVENCNK 229
           D+     ++  V+N  +
Sbjct: 63  DLSKGEAVRGLVDNAVR 79

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 6/76 (7%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD------QEVVDMLPRSVEIVLGD 213
           +    LV G +  +G  + + L   G SV    R  +      Q++ +           D
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCD 63

Query: 214 VGDPCTLKAAVENCNK 229
           V +   +K  +E   +
Sbjct: 64  VSNYEEVKKLLEAVKE 79

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 155 AIPGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDV 214
           A P   + +VLV G    IG  + ++L   G+ V    R +        P+ +  V  DV
Sbjct: 1   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------PKGLFGVEVDV 54

Query: 215 GDPCTLKAAVENCNK 229
            D   +  A     +
Sbjct: 55  TDSDAVDRAFTAVEE 69

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 4/74 (5%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDML--PRSVEIVLGDVG 215
                ++ G T  IG  +  K +  G  V    R +D  ++    +  P  ++    D  
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSS 64

Query: 216 DPCTLKAAVENCNK 229
           D        +   K
Sbjct: 65  DEDGWTKLFDATEK 78

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDVGDP 217
             LV GA   IG+ +  +L+  G++V          + V   +         V  DV D 
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 218 CTLKAAVENCNK 229
             + AAVE   K
Sbjct: 63  DQVFAAVEQARK 74

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 19/120 (15%), Positives = 35/120 (29%), Gaps = 19/120 (15%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDMLPRSVEIVLGDVGDPCTLK 221
            VLV G    IGR + +     G  V     + + +EV + +         D+ D     
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI--GGAFFQVDLEDERERV 64

Query: 222 AAVENCNK-------IIYCA--TARSTITG-------DLFRVDYQGVYNVTKAFQDFNNK 265
             VE           ++  A   A  +           +  V+     +++        K
Sbjct: 65  RFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK 124

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 40.1 bits (92), Expect = 3e-04
 Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKA---LVRKADQEVVDMLPRS--VEIVLGDVGDPC 218
           +L+ G    +G  +    + +G  +     L RK   + +  L      E V GD+ +  
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62

Query: 219 TLKAAVENCN--KIIYCATARSTITG-----DLFRVDYQGVYNVTKAFQDFNNK 265
            +   +         + A   +  T        F ++  G  N+ +A + +N+ 
Sbjct: 63  DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN 116

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPR---SVEIVLGDV 214
           +  TVLV G T  IG  ++ +    G  +    R      E +    +    V   + D 
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA 66

Query: 215 GDPCTLKAAVENCNK 229
                 +  ++  + 
Sbjct: 67  SLRPEREKLMQTVSS 81

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 39.3 bits (91), Expect = 4e-04
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVR---KADQEVVDMLP---RSVEIVLGDVGD 216
             L  GA   IGR +  +L  RG SV        KA +EVV  L         +  D+  
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 67

Query: 217 PCTLKAAVENC 227
           P  + A  +  
Sbjct: 68  PSEVVALFDKA 78

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDV 214
           +  T LV G +  IG  ++ +L   G SV    R      + +         VE  + D+
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL 66

Query: 215 GDPCTLKAAVENC 227
                 +  +   
Sbjct: 67  SSRSERQELMNTV 79

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 15/120 (12%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-----QEVVDMLPR-SVEIVLGD 213
            N  V+ V A   IG    R+L+ R      ++ + +      E+  + P+ ++     D
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYD 63

Query: 214 VGDPC-----TLKAAVENCNKIIYCATARSTITGDLFR----VDYQGVYNVTKAFQDFNN 264
           V  P       LK   +    +         +          +++ G+ N T A  DF +
Sbjct: 64  VTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWD 123

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 5e-04
 Identities = 39/221 (17%), Positives = 62/221 (28%), Gaps = 24/221 (10%)

Query: 164 VLVVGATSRIGR-IVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDVGDP 217
            LV G    IG  IV     L    V    R     Q  V  L     S      D+ D 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 218 CTLKAAVENCNKI------------IYCATARSTITGD----LFRVDYQGVYNVTKAFQD 261
            +++A  +   K             I    A  T          + ++ G  +V      
Sbjct: 66  QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLP 125

Query: 262 FNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE 321
                 Q R    S    + A    +  L      +    +++V        D K  + +
Sbjct: 126 LIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ 183

Query: 322 TGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSV 362
                 S Y  T+ G   LS+  +  L       + L+ + 
Sbjct: 184 KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC 224

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 11/86 (12%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-----------QEVVDMLPRSVEIVL 211
             L+ G T + G  +   L+ +GY V  L+R++             +  ++    +++  
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 212 GDVGDPCTLKAAVENCNKIIYCATAR 237
            D+ D  +L+  ++          A 
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAA 88

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 13/109 (11%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA 223
           +L+ G    +G  +  KLM+ G+ V  +           +   +     ++ +   ++  
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNVEHWIGHENFELINHDVVEPL 62

Query: 224 VENCNKIIYCATARSTITG------DLFRVDYQGVYNVTKAFQDFNNKL 266
               ++I + A + ++            + +  G  N+    +    +L
Sbjct: 63  YIEVDQIYHLA-SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARL 110

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
           ++  VL+ GA   IGR  +      G  + A   +    +E  + +      V+ DV DP
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--GAHPVVMDVADP 61

Query: 218 CTLKAAVENC 227
            +++      
Sbjct: 62  ASVERGFAEA 71

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 10/80 (12%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSV----------KALVRKADQEVVDMLPRSVEI 209
           Q    +V G  + IG+ ++++L+  G +V          K+   +    +       V  
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 210 VLGDVGDPCTLKAAVENCNK 229
           +  ++ +   +   V++   
Sbjct: 71  IQCNIRNEEEVNNLVKSTLD 90

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 39.0 bits (90), Expect = 6e-04
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDP 217
           +    LV GA+  IGR +   L  RG  V       +  Q + D L  + + ++ +V DP
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDP 62

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 39.0 bits (90), Expect = 7e-04
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 6/76 (7%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR---KADQEVVDMLP---RSVEIVLGD 213
           +   V++ G+++ +G+ +  +       V    R        V++ +         V GD
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGD 65

Query: 214 VGDPCTLKAAVENCNK 229
           V     +   V++  K
Sbjct: 66  VTVESDVINLVQSAIK 81

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 39.2 bits (90), Expect = 7e-04
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR------KADQEVVDMLPRSVEIVLGD 213
           Q   ++V G    IG   +  +      V   V            +  +L   VE+V+GD
Sbjct: 1   QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGD 60

Query: 214 VGDPCTLKAAVENCNKIIYCA 234
           + D   +       + I++ A
Sbjct: 61  IADAELVDKLAAKADAIVHYA 81

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.2 bits (90), Expect = 7e-04
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-----PRSVEIVLGDVGDP 217
           + LV G T + G  + + L+ +GY V  LV +   +    L        ++   GD+ D 
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 218 CTLKAAVENCNKIIYC 233
           C+++ AV         
Sbjct: 62  CSVQRAVIKAQPQEVY 77

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 8e-04
 Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 4/78 (5%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVV----DMLPRSVEIVLGDVG 215
           Q   V V G T   G  +   L   G +VK     A           +   ++  +GD+ 
Sbjct: 7   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 66

Query: 216 DPCTLKAAVENCNKIIYC 233
           D   L  ++      I  
Sbjct: 67  DQNKLLESIREFQPEIVF 84

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 38.6 bits (89), Expect = 8e-04
 Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPR---SVEIVLGDV 214
           + TT LV G +  IG  ++ +L   G  V    R      E +++      +VE  + D+
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL 64

Query: 215 GDPCTLKAAVENCNKI 230
                    ++    +
Sbjct: 65  LSRTERDKLMQTVAHV 80

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 10/40 (25%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ 197
           QN +V ++GA+   GR+++++++ +G    V  + R+   
Sbjct: 13  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT 52

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 38.3 bits (88), Expect = 0.001
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSV-------KALVRKADQEVVDMLPRSVEIVLGDVG 215
             ++ G   RIG  +  +L  +G+ V       +   ++   E+      S  +  GD+ 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 216 DPCTLKAAVEN 226
              +L    E+
Sbjct: 63  LSSSLLDCCED 73

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDVG 215
           +   LV GATS IG  + R+L   G  V    R  +  +  +  L       +    DV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 216 DPCTLKAAVENCNK 229
               ++A V    +
Sbjct: 62  SVPEIEALVAAVVE 75

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 37.9 bits (87), Expect = 0.002
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 5/75 (6%)

Query: 160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLP---RSVEIVLGDV 214
                LV GA   IG     +L   G ++  L    +  ++    +          + DV
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV 63

Query: 215 GDPCTLKAAVENCNK 229
                +   V++  +
Sbjct: 64  TSEEAVIGTVDSVVR 78

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 6/72 (8%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVR---KADQEVVDML---PRSVEIVLGDVGDP 217
           V+V GA+  IG+ +   L   G  V        KA +EV   +           GDV   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 218 CTLKAAVENCNK 229
             ++A ++    
Sbjct: 64  ADVEAMMKTAID 75

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVR 193
            VL+ GAT   G  ++ +++      K +  
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (86), Expect = 0.002
 Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 15/116 (12%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALV------RKADQEVVDMLPRSVEIVLGDVGDP 217
           VLV G +  IG     +L+  G+ V  L       R     +  +  +    V GD+ + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 218 CTLKAAVENCN--KIIYCATARSTITG------DLFRVDYQGVYNVTKAFQDFNNK 265
             +   + +     +I+ A     +        + +  +  G   +  A +  N K
Sbjct: 63  ALMTEILHDHAIDTVIHFA-GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 13/123 (10%)

Query: 164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRK----ADQEVVDMLPRS--VEIVLGDVGDP 217
           +L+ G    IG  V+R ++         + K     + E +  +  S        D+ D 
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62

Query: 218 CTLKAAVENCN-KIIYCATARSTIT------GDLFRVDYQGVYNVTKAFQDFNNKLAQLR 270
             +    E      +    A S +             +  G Y + +  + + + L + +
Sbjct: 63  AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK 122

Query: 271 AGK 273
              
Sbjct: 123 KNN 125

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 8/64 (12%), Positives = 21/64 (32%), Gaps = 1/64 (1%)

Query: 162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLK 221
           +T +V       G     +L   G++V A   ++ ++  ++   +               
Sbjct: 1   STAIVTNVKHFGGMGSALRLSEAGHTV-ACHDESFKQKDELEAFAETYPQLKPMSEQEPA 59

Query: 222 AAVE 225
             +E
Sbjct: 60  ELIE 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	437
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.92
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.91
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.9
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.9
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.9
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.9
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.9
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.9
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.89
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.89
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.88
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.88
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.88
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.88
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.88
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.87
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.86
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.83
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.82
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.8
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.8
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.8
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.79
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.79
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.78
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.77
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.77
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.77
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.77
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.77
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.77
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.76
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.76
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.76
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.76
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.76
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.75
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.75
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.75
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.75
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.75
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.75
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.75
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.75
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.74
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.74
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.74
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.73
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.73
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.72
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.72
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.72
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.71
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.71
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.71
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.71
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.71
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.71
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.71
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.7
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.7
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.7
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.69
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.68
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.68
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.67
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.67
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.66
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.66
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.65
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.64
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.64
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.63
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.63
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.63
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.62
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.62
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.6
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.6
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.6
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.58
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.57
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.54
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.49
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.47
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.47
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.41
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.4
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.34
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.32
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.3
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.28
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.25
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.18
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.11
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.07
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.03
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.94
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.92
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.78
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.68
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.64
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.57
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.49
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.49
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.48
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.45
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.44
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.37
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.3
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.28
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.27
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.25
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.24
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.11
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.11
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.09
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.0
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.98
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.94
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.94
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.88
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.86
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.85
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.85
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.81
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.75
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.75
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.74
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.72
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.65
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.62
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.58
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.55
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.53
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.5
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.5
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.47
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.45
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.38
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.33
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.33
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.29
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.27
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.23
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.21
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.2
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.13
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.12
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.04
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.98
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.97
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.91
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.51
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.5
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.37
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.36
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.31
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.25
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.2
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.16
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.1
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.08
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.05
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.02
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.0
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	94.87
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.86
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.81
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.8
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.8
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.78
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.73
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.71
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	94.61
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	94.55
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.51
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.27
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.27
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.21
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.1
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.1
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.09
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.04
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.03
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.03
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.86
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.83
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.82
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.79
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.42
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.38
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.25
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.24
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.14
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.94
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.8
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.77
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.45
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.39
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.32
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.28
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.22
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.19
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.16
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	91.98
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	91.74
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.68
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	91.63
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.62
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.44
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	91.41
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.38
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.31
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.1
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.92
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	90.72
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.65
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.65
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	90.46
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.4
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.4
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.21
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.05
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.95
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.85
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	89.83
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.76
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.71
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.23
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	89.21
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	88.36
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	88.16
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	88.12
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.06
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.5
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.49
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	87.32
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.25
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	87.04
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.82
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	86.03
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	85.8
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	85.57
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	85.06
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.51
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	84.21
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.16
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.35
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.28
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	82.4
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.23
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	82.07
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	82.03
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.9
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.86
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.79
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.24
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	81.24
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	80.9
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	80.52
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	80.32

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1e-24  Score=217.02  Aligned_cols=256  Identities=15%  Similarity=0.156  Sum_probs=181.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHH-------hhCCCCeEEEEecCCCHHHHHHHHhcc--cE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVV-------DMLPRSVEIVLGDVGDPCTLKAAVENC--NK  229 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~-------~~~~~~v~~v~~Dltd~~~v~~a~~~~--D~  229 (437)
                      |+|||||||||||++|+++|+++|++|++++|....   ...       .....++.++++||+|.++++++++++  |+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            789999999999999999999999999999996431   111       112357899999999999999999976  99


Q ss_pred             EEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc----eeeeecC-CcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK----LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk----l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      |||+|+.....     +...+++|+.||.+|+++|++.+++    +.++++. .||...   ...+.|+.       |..
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~---~~~~~E~~-------~~~  151 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQ---EIPQKETT-------PFY  151 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCC---SSSBCTTS-------CCC
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCC---CCCcCCCC-------CCC
Confidence            99999975432     4568999999999999999998764    5555542 233211   11233332       233


Q ss_pred             ccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------ec---------cccC---------CCcccHHH
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------LS---------KKLS---------LPLGCTLD  353 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i~---------~~~~---------~p~g~v~D  353 (437)
                      +.++|+.+|+.++.....+..+++......|+++.||...        +.         ....         ....|++|
T Consensus       152 P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D  231 (357)
T d1db3a_         152 PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD  231 (357)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence            5688999999999999888888888888888877666210        00         0100         01238999


Q ss_pred             HHHHHHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceec------------------------------c
Q 013761          354 RYEGLVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVR------------------------------V  402 (437)
Q Consensus       354 ~~~gi~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~------------------------------i  402 (437)
                      +++++++++. ..++.|++  +++.   ..+++++++.+.+..|.....                              +
T Consensus       232 ~~~a~~~~~~~~~~~~yni--~sg~---~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (357)
T d1db3a_         232 YVKMQWMMLQQEQPEDFVI--ATGV---QYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAV  306 (357)
T ss_dssp             HHHHHHHTTSSSSCCCEEE--CCCC---CEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEE
T ss_pred             HHHHHHHHHhCCCCCeEEE--CCCC---ceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEee
Confidence            9999999885 45677755  5543   578999999999998732100                              0


Q ss_pred             cCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          403 PFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       403 P~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ....+||.+.....+|.+|+++. ++|+|+.
T Consensus       307 ~~~~~r~~~~~~~~~d~skakk~-LGw~P~~  336 (357)
T d1db3a_         307 DPRYFRPAEVETLLGDPTKAHEK-LGWKPEI  336 (357)
T ss_dssp             CGGGCCCCC-CCCCBCCHHHHHH-HCCCCCS
T ss_pred             ccccCCCccccccccCHHHHHHH-HCCCcCC
Confidence            01122445555667899999998 8999974

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.3e-23  Score=206.90  Aligned_cols=258  Identities=16%  Similarity=0.099  Sum_probs=176.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---H--HHH-hhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---Q--EVV-DMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~--~~~-~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~  233 (437)
                      |+||||||+||||++|++.|+++|++|++++|...   .  ... ......+.++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            57999999999999999999999999999987432   1  111 1224579999999999999999998  68999999


Q ss_pred             ccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhhh
Q 013761          234 ATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVA  306 (437)
Q Consensus       234 Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~  306 (437)
                      |+.....     +...+++|+.|+.++++++++.+++ +.+.++.. |+..+.   ....+..      .+..+...|+.
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~---~~~~e~~------~~~~p~~~Y~~  151 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPK---IPYVESF------PTGTPQSPYGK  151 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCS---SSBCTTS------CCCCCSSHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccc---ccccccc------ccCCCcchHHH
Confidence            9976532     4578999999999999999999986 44444321 211100   0111111      12234677899


Q ss_pred             hhhhcccchhhhh-cccccceeeeeeeccCccce--------------ec----------c-cc-------CC-------
Q 013761          307 FKYDAGMDAKFEL-SETGDAVFSGYVFTRGGYVE--------------LS----------K-KL-------SL-------  346 (437)
Q Consensus       307 sk~a~~~~~~~~~-~~~~~~v~~g~~~~~~G~~~--------------i~----------~-~~-------~~-------  346 (437)
                      +|..++....... ...+..+...|.++.||...              +.          . .+       ..       
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~r  231 (338)
T d1udca_         152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR  231 (338)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEE
T ss_pred             HHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCcee
Confidence            9988887776433 33455555556655554210              00          0 00       00       


Q ss_pred             CcccHHHHHHHHHHHh---ccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHh
Q 013761          347 PLGCTLDRYEGLVLSV---GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVH  423 (437)
Q Consensus       347 p~g~v~D~~~gi~l~~---~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~  423 (437)
                      ...|+.|++.++.+.+   ...+...++|++++.   ..++.|+++.+.+.+|. .+++-+...++.+.....+|.+|++
T Consensus       232 d~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~---~~si~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~  307 (338)
T d1udca_         232 DYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV---GNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASKAD  307 (338)
T ss_dssp             CEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSS---CEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBCCBCCHHHH
T ss_pred             eEEEEeehhhhccccccccccccCcceeeecCCC---CCcHHHHHHHHHHHHCC-CCceEECCCCCCCCCEeeECHHHHH
Confidence            0127999998887765   233333445666653   57899999999999984 3344444566666677789999999


Q ss_pred             hccceeeccc
Q 013761          424 TMTIRFEPRR  433 (437)
Q Consensus       424 ~~gi~fep~~  433 (437)
                      .. ++|+|+.
T Consensus       308 ~~-lgwkp~~  316 (338)
T d1udca_         308 RE-LNWRVTR  316 (338)
T ss_dssp             HH-HCCCCCC
T ss_pred             HH-HCCCcCC
Confidence            87 7899974

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.90  E-value=1.1e-23  Score=207.88  Aligned_cols=268  Identities=14%  Similarity=0.108  Sum_probs=188.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC--Cc---HHHH-hhCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK--AD---QEVV-DMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~--~~---~~~~-~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      +||+|||||||||||++|+++|+++|++|.+++++  ..   .... .....++.++.+|++|.+.+.+++..+|.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            36899999999999999999999999876555443  11   1111 223568999999999999999999999999999


Q ss_pred             ccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCC--CCcceeeccCcccchhh
Q 013761          234 ATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSAD--SLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       234 Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~s--sl~~~i~rP~~~~~~y~  305 (437)
                      |+.....     +.+.+++|+.|+.++++++...+.++..+++. .|+......+......  ........+..+.+.|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            9876532     45789999999999999999999887666532 3332111110011100  00111112333457899


Q ss_pred             hhhhhcccchhhhhcccccceeeeeeeccCcccee---------c-----cccCC--------CcccHHHHHHHHHHHhc
Q 013761          306 AFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------S-----KKLSL--------PLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------~-----~~~~~--------p~g~v~D~~~gi~l~~~  363 (437)
                      .+|+.++..+..+..+++...+..|+++.||....         .     ..+..        ...|++|++++++.++.
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~  240 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT  240 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh
Confidence            99999999988888888888888899888873110         0     01100        11289999999998873


Q ss_pred             --cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          364 --GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       364 --~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                        ..|+.|++.  .+.   ..++.++++.+.+..+.....+.+...++..+....+|.+|++.. ++|+|+.
T Consensus       241 ~~~~~~~~~~~--~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-LGw~P~~  306 (346)
T d1oc2a_         241 KGRMGETYLIG--ADG---EKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDE-LGWTPQF  306 (346)
T ss_dssp             HCCTTCEEEEC--CSC---EEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHH-HCCCCSC
T ss_pred             hcccCcccccc--ccc---cccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHH-HCCCCcC
Confidence              456667553  322   468999999999998854444555556677777778999999988 8999974

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.90  E-value=7.6e-24  Score=211.16  Aligned_cols=263  Identities=12%  Similarity=0.112  Sum_probs=183.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEE-EecCCcH---HHHhhC--CCCeEEEEecCCCHHHHHHHHhc--ccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKA-LVRKADQ---EVVDML--PRSVEIVLGDVGDPCTLKAAVEN--CNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~-~~R~~~~---~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~  233 (437)
                      |+||||||+||||++|+++|++.|++|++ +++....   .....+  ...++++.+|++|.+.+.++++.  +|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999998655 4443221   122222  35799999999999999999985  6999999


Q ss_pred             ccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCC----------ceeeeecC-CcchhhhhhhhhccCCCCc---cee
Q 013761          234 ATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNN----------KLAQLRAG-KSSKSKLLLAKFKSADSLN---GWE  294 (437)
Q Consensus       234 Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gv----------kl~~l~~~-~~g~sk~~~~k~v~~ssl~---~~i  294 (437)
                      |+.....     +..++++|+.|+.+++++|++.++          ++.++++. .||.....   ...+....   ...
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~---~~~~~~~~~~~~~e  157 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHP---DEVENSVTLPLFTE  157 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCG---GGSCTTSCCCCBCT
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccC---CccccccCCCCccc
Confidence            9976532     467899999999999999988764          35555532 23321111   11111111   011


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee--------------ccccCC--------CcccHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL--------------SKKLSL--------PLGCTL  352 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i--------------~~~~~~--------p~g~v~  352 (437)
                      ..|..+.+.|+.+|..++.....+..+++......|+++.||....              .+.+.+        +..|++
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~  237 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE  237 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHH
Confidence            1233456789999999999998888888888888888887773210              011111        123899


Q ss_pred             HHHHHHHHHhc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCc-------eecccCCCcccCCCCCCCCCHHHHh
Q 013761          353 DRYEGLVLSVG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFC-------RVRVPFSSFRPVKPDDPPMDPFLVH  423 (437)
Q Consensus       353 D~~~gi~l~~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~-------~v~iP~~~~r~~~~~~~~ld~~ki~  423 (437)
                      |+++++++++.  ..|+.|+|  +++.   ..+..|+++.+.+..+..       ...+.+...+|.......+|.+|++
T Consensus       238 D~a~ai~~~~~~~~~~~~~Ni--~s~~---~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (361)
T d1kewa_         238 DHARALHMVVTEGKAGETYNI--GGHN---EKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKIS  312 (361)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEE--CCCC---EEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHH
T ss_pred             HHHHHHHHHHhcCCCCCeEEE--CCCC---CcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHH
Confidence            99999999984  34666755  5553   468899999998766421       1234444556677777899999999


Q ss_pred             hccceeeccc
Q 013761          424 TMTIRFEPRR  433 (437)
Q Consensus       424 ~~gi~fep~~  433 (437)
                      .. ++|+|+.
T Consensus       313 ~~-lgw~P~~  321 (361)
T d1kewa_         313 RE-LGWKPLE  321 (361)
T ss_dssp             HH-HCCCCSC
T ss_pred             HH-HCCCCCC
Confidence            87 8999974

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.5e-24  Score=209.18  Aligned_cols=256  Identities=16%  Similarity=0.107  Sum_probs=181.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh-C-CCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM-L-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~-~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .|+||||||+||||++|+++|+++|++|++++|....  ..... . ...+.+...|+.     +.++.++|+|||+|+.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV-----EPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT-----SCCCCCCSEEEECCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHH-----HHHHcCCCEEEECccc
Confidence            3799999999999999999999999999999874331  11111 1 224555555554     4456689999999997


Q ss_pred             CCC-----chhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhh
Q 013761          237 RST-----ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       237 ~~~-----~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                      ...     .+.+.+++|+.|+.++++++++.++++.++++. .|+....   ..+.+...  ....|..+...|+.+|..
T Consensus        76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~---~~~~e~~~--~~~~~~~p~~~Y~~sK~~  150 (312)
T d2b69a1          76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEV---HPQSEDYW--GHVNPIGPRACYDEGKRV  150 (312)
T ss_dssp             CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSS---SSBCTTCC--CBCCSSSTTHHHHHHHHH
T ss_pred             CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCC---CCCCcccc--CCCCCCCCccHHHHHHHH
Confidence            553     255689999999999999999999998777643 2321110   11222211  112344456789999999


Q ss_pred             cccchhhhhcccccceeeeeeeccCcccee----------c------cccCC--------CcccHHHHHHHHHHHhc-cC
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVEL----------S------KKLSL--------PLGCTLDRYEGLVLSVG-GN  365 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------~------~~~~~--------p~g~v~D~~~gi~l~~~-~~  365 (437)
                      ++.....+..+++......|+++.||....          .      +.+.+        +..|++|++++++.++. ..
T Consensus       151 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~  230 (312)
T d2b69a1         151 AETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV  230 (312)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc
Confidence            999998888888888888888888873210          0      11111        12389999999998884 44


Q ss_pred             CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          366 GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       366 Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ++.|++  +++.   ..++.++++.+.+..|. ...+-+...++.++....+|.+|++.. ++|+|+.
T Consensus       231 ~~~~n~--~~~~---~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~-lgw~p~~  291 (312)
T d2b69a1         231 SSPVNL--GNPE---EHTILEFAQLIKNLVGS-GSEIQFLSEAQDDPQKRKPDIKKAKLM-LGWEPVV  291 (312)
T ss_dssp             CSCEEE--SCCC---EEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCCCCCBCCHHHHHH-HCCCCCS
T ss_pred             CCceEe--cCCc---ccchhhHHHHHHHHhCC-CCceEECCCCCCCCCeeeECHHHHHHH-HCCCCCC
Confidence            566655  5543   57899999999999984 234444455666677788999999988 8999974

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=5.4e-23  Score=203.77  Aligned_cols=262  Identities=12%  Similarity=-0.005  Sum_probs=186.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARST  239 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~~  239 (437)
                      ++|+|||||||||||++|+++|+++|++|+++++....... .......+..+|+.|.+.+.++++++|+|||+|+....
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~   92 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG   92 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence            57889999999999999999999999999999886542111 11235578889999999999999999999999987553


Q ss_pred             c------hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhc
Q 013761          240 I------TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDA  311 (437)
Q Consensus       240 ~------~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~  311 (437)
                      .      ....+.+|+.|+.++++++.+.+++ +.+.++. .++..+.   ....+.........|..+.+.|+.+|+.+
T Consensus        93 ~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~---~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~  169 (363)
T d2c5aa1          93 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ---LETTNVSLKESDAWPAEPQDAFGLEKLAT  169 (363)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGS---SSSSSCEECGGGGSSBCCSSHHHHHHHHH
T ss_pred             ccccccccccccccccchhhHHHHhHHhhCcccccccccccccccccc---ccccccccccccCCcCCCCCHHHHHHHHH
Confidence            2      4568899999999999999999986 5555432 2221111   01112212222233445668899999999


Q ss_pred             ccchhhhhcccccceeeeeeeccCccceec-------------------ccc--------CCCcccHHHHHHHHHHHhc-
Q 013761          312 GMDAKFELSETGDAVFSGYVFTRGGYVELS-------------------KKL--------SLPLGCTLDRYEGLVLSVG-  363 (437)
Q Consensus       312 ~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~-------------------~~~--------~~p~g~v~D~~~gi~l~~~-  363 (437)
                      +..+..+..+++......|+++.||.....                   ...        .....|+.|++++++..+. 
T Consensus       170 E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~  249 (363)
T d2c5aa1         170 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS  249 (363)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhC
Confidence            998888888888888889988888732100                   000        0112389999999998884 


Q ss_pred             cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          364 GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       364 ~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      ..++.|++  +++.   ..++.++++.+.+..|.. ..+.+.. ++.......+|.+|++++ ++|+|+.
T Consensus       250 ~~~~~~ni--~~~~---~~s~~~l~~~i~~~~g~~-~~i~~~~-~~~~~~~~~~d~ska~~~-LGw~p~~  311 (363)
T d2c5aa1         250 DFREPVNI--GSDE---MVSMNEMAEMVLSFEEKK-LPIHHIP-GPEGVRGRNSDNNLIKEK-LGWAPNM  311 (363)
T ss_dssp             SCCSCEEE--CCCC---CEEHHHHHHHHHHTTTCC-CCEEEEC-CCCCCSBCEECCHHHHHH-HSCCCCC
T ss_pred             CCCCeEEE--ecCC---cccHHHHHHHHHHHhCCC-CceEeCC-CCCCccccccCHHHHHHH-hCCCCCC
Confidence            45677755  4443   578999999999998842 2222211 233345567899999998 8899964

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=5e-23  Score=199.95  Aligned_cols=257  Identities=19%  Similarity=0.201  Sum_probs=185.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhC--CCCeEEEEecCCCHHHHHHHHhcc--cEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDML--PRSVEIVLGDVGDPCTLKAAVENC--NKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh~A  234 (437)
                      |+|||||||||||++|+++|+++||+|++++|....   ..++.+  ..++.++.+|++|.+.+.+++...  ++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            689999999999999999999999999999997542   223333  357899999999999999988764  7888888


Q ss_pred             cCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc--eeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhh
Q 013761          235 TARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK--LAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAF  307 (437)
Q Consensus       235 g~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk--l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~s  307 (437)
                      +.....     ...++.+|+.|+.++++++++.+++  +.+.+...++....  .....|.       .|..+.+.|+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~--~~~~~E~-------~~~~p~~~Y~~s  151 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ--AERQDEN-------TPFYPRSPYGVA  151 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS--SSSBCTT-------SCCCCCSHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCccc--CCCCCCC-------CCccccChhHHH
Confidence            765432     4568999999999999999999875  33333322211100  0111122       233456889999


Q ss_pred             hhhcccchhhhhcccccceeeeeeeccCccce--------e---------ccccCC---------CcccHHHHHHHHHHH
Q 013761          308 KYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L---------SKKLSL---------PLGCTLDRYEGLVLS  361 (437)
Q Consensus       308 k~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i---------~~~~~~---------p~g~v~D~~~gi~l~  361 (437)
                      |+.++.....+..+++......++++.||...        +         .....+         +..|++|++++++++
T Consensus       152 K~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~  231 (321)
T d1rpna_         152 KLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM  231 (321)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHH
Confidence            99999998888888888888888887776311        0         011111         123899999999999


Q ss_pred             hc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCc---eecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          362 VG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFC---RVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       362 ~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~---~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +. ..++.|++.  ++.   ..++.++++.+.+..|..   .+.++...+||.+.....+|.+|++.+ ++|+|+.
T Consensus       232 ~~~~~~~~~ni~--~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~-lG~~P~~  301 (321)
T d1rpna_         232 LQQDKADDYVVA--TGV---TTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRV-LGWKPRT  301 (321)
T ss_dssp             HHSSSCCCEEEC--CSC---EEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHH-HCCCCCS
T ss_pred             HhcCCcCCceec--ccc---cceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHH-HCCCcCC
Confidence            84 446667664  332   468999999999998843   233455556777777788899999998 7899964

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.90  E-value=3.7e-23  Score=201.02  Aligned_cols=265  Identities=12%  Similarity=0.041  Sum_probs=178.8

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---HHHHh--hCCCCeEEEEecCCCHHHHHHHHhcc--cEEEEecc
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---QEVVD--MLPRSVEIVLGDVGDPCTLKAAVENC--NKIIYCAT  235 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~~~~~--~~~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh~Ag  235 (437)
                      +|||||||||||++|++.|+++|++|+++++-..   .....  ....+++++.+|++|.+.+.++++++  |+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            7999999999999999999999999999986322   11111  12457899999999999999999876  99999999


Q ss_pred             CCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec-CCcchhhhhhhhhccCCC--------CcceeeccCcc
Q 013761          236 ARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA-GKSSKSKLLLAKFKSADS--------LNGWEVRQGTY  300 (437)
Q Consensus       236 ~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~-~~~g~sk~~~~k~v~~ss--------l~~~i~rP~~~  300 (437)
                      .....     +..++++|+.||.+|++++.+.+++ +.+.++ ..++...... .......        .......+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQY-KYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTS-CEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-ccccccccccccccccCcccCCcccc
Confidence            86543     4678999999999999999999886 322222 1111100000 0000000        00000112224


Q ss_pred             cchhhhhhhhcccchhhhhcccccceeeeeeeccCcc---ce--------e-----------ccccC--------CCccc
Q 013761          301 FQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGY---VE--------L-----------SKKLS--------LPLGC  350 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~---~~--------i-----------~~~~~--------~p~g~  350 (437)
                      ...|+..+...+.........++......+.++.++.   ..        .           .+.+.        .+..|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            5678888888887777777766666555555543320   00        0           00010        11238


Q ss_pred             HHHHHHHHHHHhc----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhcc
Q 013761          351 TLDRYEGLVLSVG----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMT  426 (437)
Q Consensus       351 v~D~~~gi~l~~~----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~g  426 (437)
                      ++|++++++.++.    ..|+.|.++.+.+.   ..++.|+++.+.+..|. ..++.+...++.+.....+|.+|+++. 
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~---~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~-  315 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVN---SLSLLELFKLLEDYCNI-DMRFTNLPVRESDQRVFVADIKKITNA-  315 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGG---EEEHHHHHHHHHHHHTC-CCCEEEECCCSSCCSEECBCCHHHHHH-
T ss_pred             ccchhhHHHHHHhccccccCccccccccccc---cccHHHHHHHHHHHHCC-CceeEeCCCCCCCcCeeeECHHHHHHH-
Confidence            9999999998873    46788888655443   56899999999999885 234444556677676778899999998 


Q ss_pred             ceeeccc
Q 013761          427 IRFEPRR  433 (437)
Q Consensus       427 i~fep~~  433 (437)
                      ++|+|+.
T Consensus       316 Lg~~p~~  322 (338)
T d1orra_         316 IDWSPKV  322 (338)
T ss_dssp             HCCCCCS
T ss_pred             HCCCcCC
Confidence            8899974

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=7e-23  Score=201.09  Aligned_cols=264  Identities=13%  Similarity=0.054  Sum_probs=175.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHH-HHhcccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKA-AVENCNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~-a~~~~D~VIh~Ag~~~~  239 (437)
                      |+|||||||||||++|+++|+++| ++|+++++............+++++.+||++.+++.+ +++++|+|||+|+....
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            589999999999999999999999 5899998865431111224579999999998766554 77789999999998654


Q ss_pred             c-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          240 I-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       240 ~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                      .     +...+.+|+.|+.++++++.+.+++..+.++. .|+....   ....+.........+..+...|+.+|..++.
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~  157 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSD---KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR  157 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCC---SSBCTTTCCCBCCCTTCGGGHHHHHHHHHHH
T ss_pred             cccccCCccccccccccccccccccccccccccccccccccccccc---cccccccccccccccCCCcchhhhcccchhh
Confidence            3     34679999999999999999999886555432 2221110   0111111111111223355779999999999


Q ss_pred             chhhhhcccccceeeeeeeccCccce----------------e------ccccC--------CCcccHHHHHHHHHHHhc
Q 013761          314 DAKFELSETGDAVFSGYVFTRGGYVE----------------L------SKKLS--------LPLGCTLDRYEGLVLSVG  363 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G~~~----------------i------~~~~~--------~p~g~v~D~~~gi~l~~~  363 (437)
                      ....+..+++......+....+|...                .      .+.+.        .+..|++|+++++.+++.
T Consensus       158 ~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~  237 (342)
T d2blla1         158 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE  237 (342)
T ss_dssp             HHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHH
T ss_pred             hhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehh
Confidence            99888888777777776666554210                0      00010        112389999999999983


Q ss_pred             -----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce--ecccCCC-c-----------ccCCCCCCCCCHHHHhh
Q 013761          364 -----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR--VRVPFSS-F-----------RPVKPDDPPMDPFLVHT  424 (437)
Q Consensus       364 -----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~-~-----------r~~~~~~~~ld~~ki~~  424 (437)
                           ..|+.|++  +++.  ..+|++++++.+.+..|...  ..+|... .           ++.++....+|.+|+++
T Consensus       238 ~~~~~~~g~~~Ni--g~~~--~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  313 (342)
T d2blla1         238 NAGNRCDGEIINI--GNPE--NEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHR  313 (342)
T ss_dssp             CGGGTTTTEEEEE--CCTT--SEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHH
T ss_pred             hccccCCCeEEEE--eccc--chhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHH
Confidence                 23666755  4432  13589999999999887321  1222111 1           11123445679999999


Q ss_pred             ccceeeccc
Q 013761          425 MTIRFEPRR  433 (437)
Q Consensus       425 ~gi~fep~~  433 (437)
                      + ++|+|+.
T Consensus       314 ~-lgw~P~~  321 (342)
T d2blla1         314 C-LDWEPKI  321 (342)
T ss_dssp             H-HCCCCCC
T ss_pred             H-HCCCcCC
Confidence            8 8999974

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.89  E-value=1.3e-22  Score=202.76  Aligned_cols=263  Identities=13%  Similarity=0.029  Sum_probs=181.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecCCc-----------HH---HHhh--------CCCCeEEEEecCCCH
Q 013761          161 NTTVLVVGATSRIGRIVIRKLML-RGYSVKALVRKAD-----------QE---VVDM--------LPRSVEIVLGDVGDP  217 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~~R~~~-----------~~---~~~~--------~~~~v~~v~~Dltd~  217 (437)
                      +|+||||||+||||++|+++|++ .|++|+++|+-..           ..   ....        ....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46999999999999999999986 7899999985110           10   0111        123578999999999


Q ss_pred             HHHHHHHhc---ccEEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCcee-eeec-CCcchhhhhhhhhccC
Q 013761          218 CTLKAAVEN---CNKIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNKLA-QLRA-GKSSKSKLLLAKFKSA  287 (437)
Q Consensus       218 ~~v~~a~~~---~D~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~-~l~~-~~~g~sk~~~~k~v~~  287 (437)
                      +.++++++.   +|+|||+|+.....     ....+++|+.++.+++++++..+++.. .++. ..++.....   ....
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~---~~~~  158 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMG---SVST  158 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC--------
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccc---cccc
Confidence            999999974   69999999976543     345789999999999999999998732 2221 112111000   0111


Q ss_pred             CCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceec--------------------------
Q 013761          288 DSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELS--------------------------  341 (437)
Q Consensus       288 ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~--------------------------  341 (437)
                      ...+...-.+..+...|+.+|..++..+..+...++......|+++.||.....                          
T Consensus       159 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~  238 (383)
T d1gy8a_         159 NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP  238 (383)
T ss_dssp             CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred             cccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccc
Confidence            111111223334568899999999999988888888888888888877721100                          


Q ss_pred             -------------ccc-------C-------CCcccHHHHHHHHHHHhc-----------cCCcEEEEEccCCCCCCCCc
Q 013761          342 -------------KKL-------S-------LPLGCTLDRYEGLVLSVG-----------GNGRSYVLILEAGPSADRSQ  383 (437)
Q Consensus       342 -------------~~~-------~-------~p~g~v~D~~~gi~l~~~-----------~~Ge~y~l~l~~~~~~~~~s  383 (437)
                                   ..+       .       .+..|++|+++++++++.           ..++.|  |++++.   ..+
T Consensus       239 ~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~--Ni~s~~---~~s  313 (383)
T d1gy8a_         239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVF--NLGTSR---GYS  313 (383)
T ss_dssp             C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEE--EESCSC---CEE
T ss_pred             cccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEE--EeCCCC---cee
Confidence                         000       0       011379999999998872           123445  556554   578


Q ss_pred             HHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          384 SKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       384 ~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +.|+++.+.+..|.. +.+.+...++.+.....+|.+|+++. ++|+|+.
T Consensus       314 ~~el~~~i~~~~~~~-~~~~~~~~~~~d~~~~~~d~~k~~k~-LGw~P~~  361 (383)
T d1gy8a_         314 VREVIEVARKTTGHP-IPVRECGRREGDPAYLVAASDKAREV-LGWKPKY  361 (383)
T ss_dssp             HHHHHHHHHHHHCCC-CCEEEECCCTTCCSEECBCCHHHHHH-TCCCCSC
T ss_pred             HHHHHHHHHHHhCCC-CceEECCCCCCCcCEeeeCHHHHHHH-HCCccCC
Confidence            999999999998842 33444455666666778899999998 8999975

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=6.5e-23  Score=205.49  Aligned_cols=267  Identities=12%  Similarity=0.030  Sum_probs=176.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc------------------HHHH----hhCCCCeEEEEecCCCHH
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD------------------QEVV----DMLPRSVEIVLGDVGDPC  218 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~------------------~~~~----~~~~~~v~~v~~Dltd~~  218 (437)
                      ||+|||||||||||++|+++|+++||+|+++|....                  ....    .....+++++.+||+|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            689999999999999999999999999999973110                  0011    112457899999999999


Q ss_pred             HHHHHHhcc--cEEEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCce--eeeecCC-cchhhhhh-h--
Q 013761          219 TLKAAVENC--NKIIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNKL--AQLRAGK-SSKSKLLL-A--  282 (437)
Q Consensus       219 ~v~~a~~~~--D~VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvkl--~~l~~~~-~g~sk~~~-~--  282 (437)
                      .++++++++  |+|||+||.....        +...+.+|+.|+.++++++++.+++.  ...++.. ++...... +  
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            999999875  9999999875432        23578999999999999999988763  2222211 11000000 0  


Q ss_pred             hhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCcccee---------------------c
Q 013761          283 KFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------------------S  341 (437)
Q Consensus       283 k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------------------~  341 (437)
                      ....+.........|..+.+.|+.+|+.++.....+..+++......|+.+.||....                     .
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  240 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence            0001111111223344567789999999999998888888888888887776663210                     0


Q ss_pred             ----------cccC--------CCcccHHHHHHHHHHHhc---cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC---C
Q 013761          342 ----------KKLS--------LPLGCTLDRYEGLVLSVG---GNGRSYVLILEAGPSADRSQSKLYFARFSTKVG---F  397 (437)
Q Consensus       342 ----------~~~~--------~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G---~  397 (437)
                                ..+.        .+..||+|+++++++++.   ..|+.+.+++++.    ..+++++++.+.+..+   +
T Consensus       241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~----~~si~el~~~i~~~~~~~~~  316 (393)
T d1i24a_         241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE----QFSVNELASLVTKAGSKLGL  316 (393)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSE----EEEHHHHHHHHHHHHHTTTC
T ss_pred             hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCC----eeEHHHHHHHHHHHHHhhCC
Confidence                      0000        012389999999999984   3355555655443    3678898888877643   2


Q ss_pred             c-eecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          398 C-RVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       398 ~-~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      . .........++........|.+|+++  ++|+|+.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~--LGw~P~~  351 (393)
T d1i24a_         317 DVKKMTVPNPRVEAEEHYYNAKHTKLME--LGLEPHY  351 (393)
T ss_dssp             CCCEEEECCSSCSCSSCCCCBCCCHHHH--TTCCCCC
T ss_pred             CcceeeccCCCCCCCccEecCCHHHHHH--cCCcccc
Confidence            1 11111122344555666889999986  5899975

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.88  E-value=1.1e-22  Score=198.53  Aligned_cols=256  Identities=15%  Similarity=0.103  Sum_probs=184.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeE------EEEecCCc---HHHHh--hCCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSV------KALVRKAD---QEVVD--MLPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V------~~~~R~~~---~~~~~--~~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|||||||||||++|++.|+++|++|      +.+++...   .....  .....+.++.+|+++...+......+|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            589999999999999999999999854      44443321   11111  22457999999999999999999999999


Q ss_pred             EEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          231 IYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       231 Ih~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      ||+|+.....     ....+++|+.|+.++++++.+.+++ +.++++. .|+....   ..+.+.       .|..+.+.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~---~~~~E~-------~~~~p~~~  150 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS---GSWTES-------SPLEPNSP  150 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSS---SCBCTT-------SCCCCCSH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCC---CCCCCC-------CCCCCCCH
Confidence            9999876433     4568899999999999999999976 5555532 2321110   112222       23345678


Q ss_pred             hhhhhhhcccchhhhhcccccceeeeeeeccCcccee---------c-----cccCC--------CcccHHHHHHHHHHH
Q 013761          304 VVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVEL---------S-----KKLSL--------PLGCTLDRYEGLVLS  361 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i---------~-----~~~~~--------p~g~v~D~~~gi~l~  361 (437)
                      |+.+|..++.....+..+++......|+++.||....         .     +.+.+        ...|++|++++++.+
T Consensus       151 Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~  230 (322)
T d1r6da_         151 YAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALV  230 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHH
Confidence            9999999999988888888888888888887773210         0     11111        112899999999999


Q ss_pred             hc--cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceeeccc
Q 013761          362 VG--GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       362 ~~--~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +.  ..|+.|++  +++.   ..++.|+++.+.+.+|.....+.....++..+....+|.+|++.. ++|+|+.
T Consensus       231 ~~~~~~~~~~ni--~~~~---~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-lg~~p~~  298 (322)
T d1r6da_         231 LAGGRAGEIYHI--GGGL---ELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERE-LGYRPQV  298 (322)
T ss_dssp             HHHCCTTCEEEE--CCCC---EEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHH-HCCCCCS
T ss_pred             HhCCCCCCeeEE--eecc---cchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHH-HCCCCCC
Confidence            94  45677766  4443   578999999999999853333444445566666678999999988 8999874

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-21  Score=192.96  Aligned_cols=257  Identities=16%  Similarity=0.118  Sum_probs=172.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---------H--HHHh-hCCCCeEEEEecCCCHHHHHHHHhcc-
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---------Q--EVVD-MLPRSVEIVLGDVGDPCTLKAAVENC-  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---------~--~~~~-~~~~~v~~v~~Dltd~~~v~~a~~~~-  227 (437)
                      -|+|||||||||||++|+++|+++|++|+++||...         .  .... .....+.++.+|++|.+.+++++.+. 
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            379999999999999999999999999999986221         1  1111 12457899999999999999999876 


Q ss_pred             -cEEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCc
Q 013761          228 -NKIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       228 -D~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                       |+++|+||.....     +.+.+++|+.|+.++++++.+.+++ +.+.++. .++....     .... ..   .....
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~-----~~~~-~~---~~~~~  152 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQY-----LPLD-EA---HPTGG  152 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSS-----SSBC-TT---SCCCC
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccc-----cccc-cc---ccccc
Confidence             6899999976533     4568999999999999999999987 4343321 1211100     0000 00   01112


Q ss_pred             ccchhhhhhhhcccchhhhhc-ccccceeeeeeeccCccce--------------ec------------------cccCC
Q 013761          300 YFQDVVAFKYDAGMDAKFELS-ETGDAVFSGYVFTRGGYVE--------------LS------------------KKLSL  346 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~-~~~~~v~~g~~~~~~G~~~--------------i~------------------~~~~~  346 (437)
                      +.++|+.+|..++.....+.. ..+......|+++.||...              +.                  .....
T Consensus       153 ~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~  232 (346)
T d1ek6a_         153 CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT  232 (346)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             cCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccC
Confidence            346688888877766544333 3455555555555554100              00                  00000


Q ss_pred             -------CcccHHHHHHHHHHHh-----ccCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCC
Q 013761          347 -------PLGCTLDRYEGLVLSV-----GGNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDD  414 (437)
Q Consensus       347 -------p~g~v~D~~~gi~l~~-----~~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~  414 (437)
                             +..|++|++.++..++     ...++.|  |++.+.   ..+++|+++.+.+..|. .+.+.+...++.+...
T Consensus       233 ~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~--Ni~~~~---~~s~~dl~~~i~~~~~~-~~~~~~~~~~~~e~~~  306 (346)
T d1ek6a_         233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIY--NLGTGT---GYSVLQMVQAMEKASGK-KIPYKVVARREGDVAA  306 (346)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEE--EECCSC---CEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCSE
T ss_pred             CCCCeeEeEEEEEeccchhhhhccccccccCceEE--EeCCCC---cccHHHHHHHHHHHhCC-CCCeEECCCCCCCCCE
Confidence                   1238999999888765     1234455  555543   57899999999999995 3344455567777777


Q ss_pred             CCCCHHHHhhccceeeccc
Q 013761          415 PPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       415 ~~ld~~ki~~~gi~fep~~  433 (437)
                      ..+|.+|+++. ++|+|+.
T Consensus       307 ~~~d~~k~~~~-lgw~p~~  324 (346)
T d1ek6a_         307 CYANPSLAQEE-LGWTAAL  324 (346)
T ss_dssp             ECBCCHHHHHT-TCCCCCC
T ss_pred             eeECHHHHHHH-HCCCcCC
Confidence            78999999998 8899864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.8e-21  Score=191.87  Aligned_cols=261  Identities=13%  Similarity=0.069  Sum_probs=169.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc---HH---HHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD---QE---VVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~---~~---~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~  233 (437)
                      |+|||||||||||++|+++|+++|++|+++++...   ..   ........+.++.+|++|.+.++++++  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            68999999999999999999999999999987432   11   112224578999999999999999988  57999999


Q ss_pred             ccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeec-CCcchhhhhhhhhccCCCCcceeeccCcccchhhh
Q 013761          234 ATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRA-GKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVA  306 (437)
Q Consensus       234 Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~-~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~  306 (437)
                      |+.....     +..+..+|+.|+.++++++++.+++ +.+.++ ..|+..+..    ....  +.....|..+.+.|+.
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~----~~~~--~~~e~~~~~p~~~Y~~  155 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRF----PNMI--PIPEECPLGPTNPYGH  155 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGS----TTCC--SBCTTSCCCCCSHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccC----CCCC--ccccccCCCCCChhHh
Confidence            9976532     3567899999999999999999976 555543 234322211    0001  0111123345678999


Q ss_pred             hhhhcccchhhhhc--ccccceeeeeeeccCccce--------------ec---------c--ccCC-------------
Q 013761          307 FKYDAGMDAKFELS--ETGDAVFSGYVFTRGGYVE--------------LS---------K--KLSL-------------  346 (437)
Q Consensus       307 sk~a~~~~~~~~~~--~~~~~v~~g~~~~~~G~~~--------------i~---------~--~~~~-------------  346 (437)
                      +|..++.....+..  ..+......|.++.||...              +.         .  .+..             
T Consensus       156 sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~  235 (347)
T d1z45a2         156 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE
T ss_pred             HHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCcee
Confidence            99999987765543  3445555556555443100              00         0  0000             


Q ss_pred             -CcccHHHHHHHHHHHhc---cC----CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCC
Q 013761          347 -PLGCTLDRYEGLVLSVG---GN----GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMD  418 (437)
Q Consensus       347 -p~g~v~D~~~gi~l~~~---~~----Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld  418 (437)
                       +..++.|.+.+++.++.   ..    ...-.+|++++.   ..++.|+++.+.+..|. .+.+-+...++.++....+|
T Consensus       236 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~---~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d  311 (347)
T d1z45a2         236 RDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK---GSTVFEVYHAFCKASGI-DLPYKVTGRRAGDVLNLTAK  311 (347)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSC---CEEHHHHHHHHHHHHTC-CCCC---------CCCCCBC
T ss_pred             eeeeeeecccccccccccccccccccccccccceecCCC---cccHHHHHHHHHHHHCC-CCceEeCCCCCCCCCEeeEC
Confidence             01146667777776652   11    112334556654   57899999999999995 33444455566667777899


Q ss_pred             HHHHhhccceeeccc
Q 013761          419 PFLVHTMTIRFEPRR  433 (437)
Q Consensus       419 ~~ki~~~gi~fep~~  433 (437)
                      .+|+++. ++|+|+.
T Consensus       312 ~sk~~~~-lGw~p~~  325 (347)
T d1z45a2         312 PDRAKRE-LKWQTEL  325 (347)
T ss_dssp             CHHHHHH-TCCCCCC
T ss_pred             HHHHHHH-HCCCCCC
Confidence            9999998 8999974

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=3.9e-22  Score=194.77  Aligned_cols=257  Identities=16%  Similarity=0.156  Sum_probs=181.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhh--------CCCCeEEEEecCCCHHHHHHHHhc--c
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDM--------LPRSVEIVLGDVGDPCTLKAAVEN--C  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~--------~~~~v~~v~~Dltd~~~v~~a~~~--~  227 (437)
                      .|++||||||||||++|++.|+++||+|++++|..+.   .....        ....+.++.+|+++.+.+.+.++.  +
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            3799999999999999999999999999999996431   01111        124678999999999999999875  5


Q ss_pred             cEEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc------eeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          228 NKIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK------LAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       228 D~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk------l~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      |+|||+|+.....     +...+.+|+.|+.+++++++....+      +...++...+..   .+..+.|.       .
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~---~~~~~~E~-------~  150 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS---TPPPQSET-------T  150 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTT---SCSSBCTT-------S
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceeccc---CCCCCCCC-------C
Confidence            9999999986532     4568999999999999998765422      222221111100   00112222       2


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------e---------cc-ccC--------CCccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------L---------SK-KLS--------LPLGC  350 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i---------~~-~~~--------~p~g~  350 (437)
                      |..+.+.|+.+|..++.....+..+++...+..|+++.||...        +         .. ...        .+..|
T Consensus       151 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~  230 (339)
T d1n7ha_         151 PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  230 (339)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence            4446788999999999999888888888888889888777311        0         00 000        11238


Q ss_pred             HHHHHHHHHHHhcc-CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce---ecccCCCcccCCCCCCCCCHHHHhhcc
Q 013761          351 TLDRYEGLVLSVGG-NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR---VRVPFSSFRPVKPDDPPMDPFLVHTMT  426 (437)
Q Consensus       351 v~D~~~gi~l~~~~-~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~---v~iP~~~~r~~~~~~~~ld~~ki~~~g  426 (437)
                      ++|+++++.+++.. .+..+.++.+.     ..+..++++.+.+..|...   +.+....++|.+.....+|.+|++.. 
T Consensus       231 v~D~a~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~-  304 (339)
T d1n7ha_         231 AGDYVEAMWLMLQQEKPDDYVVATEE-----GHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEV-  304 (339)
T ss_dssp             HHHHHHHHHHHHTSSSCCEEEECCSC-----EEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHH-
T ss_pred             eehHHHHHHHHHhcCCCCcccccccc-----ccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHH-
Confidence            99999999999953 34444443322     3578999999999988432   33445566788778888999999998 


Q ss_pred             ceeeccc
Q 013761          427 IRFEPRR  433 (437)
Q Consensus       427 i~fep~~  433 (437)
                      ++|+|+.
T Consensus       305 LGw~P~~  311 (339)
T d1n7ha_         305 LGWKPQV  311 (339)
T ss_dssp             HCCCCCS
T ss_pred             HCCCcCC
Confidence            8999974

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.5e-21  Score=191.36  Aligned_cols=256  Identities=17%  Similarity=0.153  Sum_probs=176.4

Q ss_pred             CEE-EEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H--------HHhhCCCCeEEEEecCCCHHHHHHHHhcc--
Q 013761          162 TTV-LVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E--------VVDMLPRSVEIVLGDVGDPCTLKAAVENC--  227 (437)
Q Consensus       162 k~v-LVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~--------~~~~~~~~v~~v~~Dltd~~~v~~a~~~~--  227 (437)
                      |+| ||||||||||++|+++|+++||+|++++|..+.   .        ........+.++.+|++|.+.+.+++.+.  
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            456 999999999999999999999999999996531   0        01112347899999999999999999764  


Q ss_pred             cEEEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCC----ceeeeecC-CcchhhhhhhhhccCCCCcceeecc
Q 013761          228 NKIIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNN----KLAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       228 D~VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gv----kl~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      ++++|+|+.....     ...++++|+.|+.+++++++++++    ++.+.++. .||..+.   ..+.|+       .|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~---~~~~E~-------~~  150 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKET-------TP  150 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS---SSBCTT-------SC
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCC---CCCCCC-------CC
Confidence            7999999875432     345789999999999999999886    35555532 3332111   122232       23


Q ss_pred             CcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccce------------ec----cc--cC--------CCcccH
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE------------LS----KK--LS--------LPLGCT  351 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~------------i~----~~--~~--------~p~g~v  351 (437)
                      ..+.+.|+.+|..++..+..+..+++......++++.||...            +.    ..  +.        ....|+
T Consensus       151 ~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v  230 (347)
T d1t2aa_         151 FYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  230 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence            335678999999999998887788888888888877776210            00    00  00        012389


Q ss_pred             HHHHHHHHHHhc-cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCcee--------------------cccCCCcccC
Q 013761          352 LDRYEGLVLSVG-GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRV--------------------RVPFSSFRPV  410 (437)
Q Consensus       352 ~D~~~gi~l~~~-~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v--------------------~iP~~~~r~~  410 (437)
                      +|++.++.+++. ..++.|.+.  ...   ..++.++.+.+....+....                    .+....+||.
T Consensus       231 ~D~~~a~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~  305 (347)
T d1t2aa_         231 KDYVEAMWLMLQNDEPEDFVIA--TGE---VHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPT  305 (347)
T ss_dssp             HHHHHHHHHHHHSSSCCCEEEC--CSC---CEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSS
T ss_pred             cHHHHHHHHHhhcCCCccceec--ccc---ccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCC
Confidence            999999999884 445556553  322   45788888888777662110                    0112234555


Q ss_pred             CCCCCCCCHHHHhhccceeeccc
Q 013761          411 KPDDPPMDPFLVHTMTIRFEPRR  433 (437)
Q Consensus       411 ~~~~~~ld~~ki~~~gi~fep~~  433 (437)
                      +.....+|.+|++++ ++|+|+.
T Consensus       306 ~~~~~~~d~skak~~-Lgw~P~~  327 (347)
T d1t2aa_         306 EVDFLQGDCTKAKQK-LNWKPRV  327 (347)
T ss_dssp             CCCBCCBCCHHHHHH-HCCCCCS
T ss_pred             CcCEeeECHHHHHHH-HCCCcCC
Confidence            556677899999998 8999974

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=2.4e-21  Score=190.25  Aligned_cols=258  Identities=15%  Similarity=0.114  Sum_probs=185.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHH---HhhC-----CCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEV---VDML-----PRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~---~~~~-----~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      ..|+|||||||||||++|+++|+++|++|++++|...  ...   ...+     ...+.++.+|+.|...+.......+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            4589999999999999999999999999999997433  111   1111     24689999999999999999999999


Q ss_pred             EEEeccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          230 IIYCATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       230 VIh~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ++|+|+.....     +...+++|+.|+.+++++|.+++++ +.++++. .||..+.   ..+.|+       .|..+.+
T Consensus        95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~---~~~~E~-------~~~~p~~  164 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPG---LPKVED-------TIGKPLS  164 (341)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC---SSBCTT-------CCCCCCS
T ss_pred             cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCC---CCccCC-------CCCCCCC
Confidence            99999865432     4568999999999999999999984 6665542 2332111   122232       2334568


Q ss_pred             hhhhhhhhcccchhhhhcccccceeeeeeeccCccce--------ec----------cccC--------CCcccHHHHHH
Q 013761          303 DVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVE--------LS----------KKLS--------LPLGCTLDRYE  356 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~--------i~----------~~~~--------~p~g~v~D~~~  356 (437)
                      .|+.+|..++.....+..+.+......|+++.||...        +.          +.+.        ....|++|++.
T Consensus       165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~  244 (341)
T d1sb8a_         165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  244 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence            8999999999998888888888888888777665211        00          0010        11238999999


Q ss_pred             HHHHHhc----cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCce----ecccCCCcccCCCCCCCCCHHHHhhccce
Q 013761          357 GLVLSVG----GNGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCR----VRVPFSSFRPVKPDDPPMDPFLVHTMTIR  428 (437)
Q Consensus       357 gi~l~~~----~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~----v~iP~~~~r~~~~~~~~ld~~ki~~~gi~  428 (437)
                      ++..++.    ..++.|.+  +.+.   ..++.++++.+.+..+...    ....+...++.+.....+|.+|+++. ++
T Consensus       245 a~~~~~~~~~~~~~~~~~~--~~~~---~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-LG  318 (341)
T d1sb8a_         245 ANLLAATAGLDARNQVYNI--AVGG---RTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKL-LG  318 (341)
T ss_dssp             HHHHHHTCCGGGCSEEEEE--SCSC---CEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHH-TC
T ss_pred             hhhhhhhccccccceeeee--cccc---cchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHH-HC
Confidence            9988873    34666755  4332   5789999999998877221    22333445566666678899999987 88


Q ss_pred             eeccc
Q 013761          429 FEPRR  433 (437)
Q Consensus       429 fep~~  433 (437)
                      |+|+.
T Consensus       319 w~p~~  323 (341)
T d1sb8a_         319 YAPKY  323 (341)
T ss_dssp             CCCCC
T ss_pred             CCcCC
Confidence            99975

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.86  E-value=2.6e-21  Score=190.10  Aligned_cols=262  Identities=14%  Similarity=0.076  Sum_probs=169.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh--hCCCCeEEEEecCCCHHHHHHHHhcc--cEEEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD--MLPRSVEIVLGDVGDPCTLKAAVENC--NKIIY  232 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~--~~~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh  232 (437)
                      +.+|+|||||||||||++|++.|+++|++|++++|+...  ....  .....++++.+||+|++.+.++++.+  |+|+|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence            468999999999999999999999999999999997652  1222  23457999999999999999998864  99999


Q ss_pred             eccCCCCc-----hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhh
Q 013761          233 CATARSTI-----TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVV  305 (437)
Q Consensus       233 ~Ag~~~~~-----~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~  305 (437)
                      +|+.....     +...+.+|+.|+.++++++.+.+.+ .....+.. +...+        ........-.|..+.++|+
T Consensus        86 ~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~--------~~~~~~~~~~~~~p~~~y~  157 (356)
T d1rkxa_          86 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNK--------EWIWGYRENEAMGGYDPYS  157 (356)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCC--------CSSSCBCTTSCBCCSSHHH
T ss_pred             hhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccc--------ccccccccccccCCCCccc
Confidence            99976442     4668999999999999999987754 22222111 11000        0000001112223456777


Q ss_pred             hhhhhcccchhhhhc---------ccccceeeeeeeccCccceec--------------cccC--------CCcccHHHH
Q 013761          306 AFKYDAGMDAKFELS---------ETGDAVFSGYVFTRGGYVELS--------------KKLS--------LPLGCTLDR  354 (437)
Q Consensus       306 ~sk~a~~~~~~~~~~---------~~~~~v~~g~~~~~~G~~~i~--------------~~~~--------~p~g~v~D~  354 (437)
                      .++...+........         ..+..+...++++.||.....              ..+.        ....|+.|+
T Consensus       158 ~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~  237 (356)
T d1rkxa_         158 NSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEP  237 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHH
T ss_pred             cccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccc
Confidence            777766654433322         234455666666665522100              0000        011289999


Q ss_pred             HHHHHHHhc---cC----CcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceeccc-CCCcccCCCCCCCCCHHHHhhcc
Q 013761          355 YEGLVLSVG---GN----GRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVP-FSSFRPVKPDDPPMDPFLVHTMT  426 (437)
Q Consensus       355 ~~gi~l~~~---~~----Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP-~~~~r~~~~~~~~ld~~ki~~~g  426 (437)
                      +.++.+++.   ..    +..+.++....   ...+.+++++.+.+..|.. ..+. ....+|.+.....+|.+|+++. 
T Consensus       238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~d~skak~~-  312 (356)
T d1rkxa_         238 LSGYLLLAQKLYTDGAEYAEGWNFGPNDA---DATPVKNIVEQMVKYWGEG-ASWQLDGNAHPHEAHYLKLDCSKAKMQ-  312 (356)
T ss_dssp             HHHHHHHHHHHHHTCGGGCSEEECCCCGG---GCEEHHHHHHHHHHHHCTT-CCEEC-------CCCCCCBCCHHHHHH-
T ss_pred             cchhhhhhhhhcccccccccccccccccc---cccccchhhhhhHHHhCCC-ccEEEcCCCCCCCcCeeeEcHHHHHHH-
Confidence            999998872   12    23343333322   2568999999999999853 2332 3345666777788999999998 


Q ss_pred             ceeeccc
Q 013761          427 IRFEPRR  433 (437)
Q Consensus       427 i~fep~~  433 (437)
                      ++|+|+.
T Consensus       313 LGw~P~~  319 (356)
T d1rkxa_         313 LGWHPRW  319 (356)
T ss_dssp             HCCCCCC
T ss_pred             HCCCcCC
Confidence            8899974

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=5.2e-20  Score=178.10  Aligned_cols=247  Identities=13%  Similarity=0.039  Sum_probs=173.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~  238 (437)
                      .|+|||||||||||++|+++|+++|+.|+++++..+               +|+.|.+.+.++++.  +|.|||+|+...
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~   66 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHDFFASERIDQVYLAAAKVG   66 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------ccccCHHHHHHHHhhcCCCEEEEcchhcc
Confidence            579999999999999999999999999988765432               599999999999875  699999998765


Q ss_pred             Cc------hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC-CcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhh
Q 013761          239 TI------TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG-KSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYD  310 (437)
Q Consensus       239 ~~------~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~-~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a  310 (437)
                      ..      ..+.+++|+.|+.+++++|.+++++ +.++++. .|+..+.   ..+.++.....  .|..+.+.|+.+|+.
T Consensus        67 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~---~~~~E~~~~~~--~~~~~~~~Y~~sK~~  141 (315)
T d1e6ua_          67 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAK---QPMAESELLQG--TLEPTNEPYAIAKIA  141 (315)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCC---SSBCGGGTTSS--CCCGGGHHHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCC---CCccCCccccC--CCCCCCCHHHHHHHH
Confidence            32      4557899999999999999999986 7776643 2332111   12222221111  122234569999999


Q ss_pred             cccchhhhhcccccceeeeeeeccCcccee------------------c-----cccC--------CCcccHHHHHHHHH
Q 013761          311 AGMDAKFELSETGDAVFSGYVFTRGGYVEL------------------S-----KKLS--------LPLGCTLDRYEGLV  359 (437)
Q Consensus       311 ~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i------------------~-----~~~~--------~p~g~v~D~~~gi~  359 (437)
                      ++.....+..+++..+...|+++.||....                  .     ..+.        ....+++|.++++.
T Consensus       142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~  221 (315)
T d1e6ua_         142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  221 (315)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence            999988888888888888888877762110                  0     0000        11128999999998


Q ss_pred             HHhcc---------CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCceecccCCCcccCCCCCCCCCHHHHhhccceee
Q 013761          360 LSVGG---------NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRVRVPFSSFRPVKPDDPPMDPFLVHTMTIRFE  430 (437)
Q Consensus       360 l~~~~---------~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v~iP~~~~r~~~~~~~~ld~~ki~~~gi~fe  430 (437)
                      ..+..         .+....++++.+.   ..++.++++.+.+.+|.. .++-+...+|.......+|.+|+++  ++|+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~i~~~~~~~-~~i~~~~~~~~~~~~~~~d~sk~k~--Lg~~  295 (315)
T d1e6ua_         222 HVMELAHEVWLENTQPMLSHINVGTGV---DCTIRELAQTIAKVVGYK-GRVVFDASKPDGTPRKLLDVTRLHQ--LGWY  295 (315)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSC---CEEHHHHHHHHHHHHTCC-SEEEEETTSCCCCSBCCBCCHHHHH--TTCC
T ss_pred             HhhhhccccccccccccccccccCCCc---chHHHHHHHHHHHHhCCC-cceEECCCCCCCCceeccCHHHHHH--cCCC
Confidence            87721         1222233444443   457899999999999853 3455556677766667899999986  5788


Q ss_pred             ccc
Q 013761          431 PRR  433 (437)
Q Consensus       431 p~~  433 (437)
                      |+.
T Consensus       296 p~~  298 (315)
T d1e6ua_         296 HEI  298 (315)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.82  E-value=4e-20  Score=175.17  Aligned_cols=201  Identities=17%  Similarity=0.153  Sum_probs=140.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..+++...+.++++|++|+++++++++.       +|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            789999999999999999999999999999999998763  34556677889999999999999988865       499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||.....         |++++++|+.|++++++++      ++.|.....|       +++..++.......|+  
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~G-------~Ii~isS~~~~~~~~~--  148 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAV------VKPMKEAGRG-------SIINISSIEGLAGTVA--  148 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTSCCTT--
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHH------HhHHHhcCcc-------eEEecccccccccccc--
Confidence            99999985422         6789999999999999988      5555543333       4666666655433343  


Q ss_pred             cchhhhhhhhcccchhhhhccccc------ceeeeeeeccCccceeccccCCC---cccHHHHHHHHHHHhc-----cCC
Q 013761          301 FQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYVELSKKLSLP---LGCTLDRYEGLVLSVG-----GNG  366 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~~i~~~~~~p---~g~v~D~~~gi~l~~~-----~~G  366 (437)
                      ...|..+|.+...+......+++.      .+.++.+.++............|   .+..+|+++.++..+.     -.|
T Consensus       149 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG  228 (244)
T d1nffa_         149 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTG  228 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhChhhCCCcC
Confidence            567888888777666554444432      33444443332100000001122   2367888887776552     357


Q ss_pred             cEEEEEcc
Q 013761          367 RSYVLILE  374 (437)
Q Consensus       367 e~y~l~l~  374 (437)
                      +...+.++
T Consensus       229 ~~i~vDGG  236 (244)
T d1nffa_         229 AEFVVDGG  236 (244)
T ss_dssp             CEEEESTT
T ss_pred             CEEEECCC
Confidence            87777544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.80  E-value=4.1e-19  Score=169.06  Aligned_cols=202  Identities=14%  Similarity=0.128  Sum_probs=139.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.  +..+++...+.++++|++|+++++++++.       +|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            4889999999999999999999999999999999998763  34556677899999999999999988864       49


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +||||||+....         |++++++|+.|++++++++      ++.|.....|       +++..+++......|+ 
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~------~p~m~~~~~G-------~II~isS~~~~~~~~~-  147 (254)
T d1hdca_          82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTV------IPAMKDAGGG-------SIVNISSAAGLMGLAL-  147 (254)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTSCCTT-
T ss_pred             EEEecCccccccccccccccccchhhhHHhhHHHHHHHHH------HHHHhhcCCC-------eecccccchhcccccc-
Confidence            999999985432         6779999999999999999      5555543333       4666666655444443 


Q ss_pred             ccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCcc---ceeccc-c-CCCcc----cHHHHHHHHHHHhc-
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGY---VELSKK-L-SLPLG----CTLDRYEGLVLSVG-  363 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~---~~i~~~-~-~~p~g----~v~D~~~gi~l~~~-  363 (437)
                       ...|..+|.+...+......+++.      .+.++.+.++.-.   ...... . ..|.+    .-+|++++++..+. 
T Consensus       148 -~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~  226 (254)
T d1hdca_         148 -TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             -hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhch
Confidence             567888888776666544444432      2333333332100   000000 0 12222    24788877776552 


Q ss_pred             ----cCCcEEEEEcc
Q 013761          364 ----GNGRSYVLILE  374 (437)
Q Consensus       364 ----~~Ge~y~l~l~  374 (437)
                          -.|+...+.++
T Consensus       227 ~a~~itG~~i~vDGG  241 (254)
T d1hdca_         227 TSSYVTGAELAVDGG  241 (254)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhCCCCCceEEeCCC
Confidence                35888888655

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.80  E-value=4.5e-19  Score=167.95  Aligned_cols=150  Identities=15%  Similarity=0.214  Sum_probs=116.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      .|++|++|||||++|||+++++.|+++|++|++++|+..+   ...+..+.++.++.+|++|+++++++++.       +
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            3789999999999999999999999999999999998763   23445677899999999999999988764       4


Q ss_pred             cEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||+...         .|++.+++|+.|++++++++      ++.|.....|       .+++.++.......|+
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~G-------~Iv~isS~~~~~~~~~  148 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAF------VPGMKRNGWG-------RIINLTSTTYWLKIEA  148 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGGSCCSS
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHH------HhHHHhcCCC-------CccccccchhcccCcc
Confidence            999999998542         26789999999999999999      6666544333       4666666655443443


Q ss_pred             cccchhhhhhhhcccchhhhhccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                        ...|..+|.+...+......+.
T Consensus       149 --~~~Y~asKaal~~ltk~lA~el  170 (247)
T d2ew8a1         149 --YTHYISTKAANIGFTRALASDL  170 (247)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --cccchhhhccHHHHHHHHHHHh
Confidence              5668888887666554444433

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=1.4e-19  Score=171.21  Aligned_cols=151  Identities=19%  Similarity=0.236  Sum_probs=117.0

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      +|+||+++||||++|||++++++|+++|++|++++|+.+.  +..+++..+...+.+|++|+++++++++.       +|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            5789999999999999999999999999999999998762  33445566788999999999999988875       49


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +||||||.....         |++.+++|+.|++++++++      ++.|.....|       ++++.++.......|+ 
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~G-------~II~isS~~~~~~~~~-  146 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAV------MRAMMKKRHG-------RIITIGSVVGTMGNGG-  146 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCHHHHHCCTT-
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHH------HHHHHHcCCC-------EeeeecchhhcCCCCC-
Confidence            999999975432         6779999999999999999      6666544333       4666666655433343 


Q ss_pred             ccchhhhhhhhcccchhhhhcccc
Q 013761          300 YFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                       ...|..+|.+...+......+++
T Consensus       147 -~~~Y~asKaal~~lt~~lA~ela  169 (243)
T d1q7ba_         147 -QANYAAAKAGLIGFSKSLAREVA  169 (243)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHhC
Confidence             56788888877666654444443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=7.3e-19  Score=160.95  Aligned_cols=141  Identities=18%  Similarity=0.257  Sum_probs=111.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      |.+|+|+||||||+||++++++|+++|++|++++|+.+. ........++++.+|++|.+++.++++++|+|||++|...
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR-LPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG-SCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhh-cccccccccccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence            467899999999999999999999999999999998653 1122345789999999999999999999999999998754


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecCC--------------cchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAGK--------------SSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~~--------------~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      ..  ....++..++.++++++++++++ +.++++..              +...+...++++..+++.++++||+.+++
T Consensus        80 ~~--~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~  156 (205)
T d1hdoa_          80 DL--SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGD  156 (205)
T ss_dssp             CC--SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEEC
T ss_pred             ch--hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEecceecC
Confidence            32  22356788999999999999986 44444211              12334445677888899999999986654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.79  E-value=8.7e-19  Score=165.05  Aligned_cols=145  Identities=19%  Similarity=0.161  Sum_probs=110.9

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |.|++|++|||||++|||++++++|+++|++|++++|+.+.      ...+..+++|++|+++++++++.       +|+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            56899999999999999999999999999999999998653      23567899999999999988875       499


Q ss_pred             EEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+...         .|++++++|+.+++++++++      ++.|.....+       ++++.+++......|+  
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~g-------~Iv~isS~~~~~~~~~--  141 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA------SRSMQRNKFG-------RMIFIGSVSGLWGIGN--  141 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEEECCCCC-----C--
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhh------hhcccccCCC-------ceEEEcchhhccCCcc--
Confidence            9999997542         26789999999999999998      5566544433       4667676655443443  


Q ss_pred             cchhhhhhhhcccchhhhhccc
Q 013761          301 FQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ...|..+|.+...+......+.
T Consensus       142 ~~~Y~asKaal~~lt~~lA~e~  163 (237)
T d1uzma1         142 QANYAASKAGVIGMARSIAREL  163 (237)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhh
Confidence            5678888887766654444443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.78  E-value=9.5e-19  Score=172.07  Aligned_cols=230  Identities=16%  Similarity=0.060  Sum_probs=146.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH-HH------hhCCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE-VV------DMLPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~-~~------~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      .||+||||||+||||++|++.|+++|++|++++|+.+.. ..      ........++.+|+.|.+++.+++.++|+|+|
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            589999999999999999999999999999999976521 11      11123445677999999999999999999999


Q ss_pred             eccCCCCc--hhhHHHHHHHHHHHHHHHHHhc-CCc-eeeeecCC--cchhhhhhhhhccCCCCcc---------eeecc
Q 013761          233 CATARSTI--TGDLFRVDYQGVYNVTKAFQDF-NNK-LAQLRAGK--SSKSKLLLAKFKSADSLNG---------WEVRQ  297 (437)
Q Consensus       233 ~Ag~~~~~--~~~~~~vNv~gt~~l~~aa~~~-gvk-l~~l~~~~--~g~sk~~~~k~v~~ssl~~---------~i~rP  297 (437)
                      +|+.....  ....+.+|+.|+.+++++|.+. +++ +.+.++..  ++........++.+.....         ....|
T Consensus        90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~  169 (342)
T d1y1pa1          90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCC
Confidence            99976533  4568899999999999999886 465 44444311  1100000001111211110         01123


Q ss_pred             Ccccchhhhhhhhcccchhhhhcccccc-----eeeeeeeccC-ccce-------ecc-----ccC--------CCcccH
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGDA-----VFSGYVFTRG-GYVE-------LSK-----KLS--------LPLGCT  351 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~-----v~~g~~~~~~-G~~~-------i~~-----~~~--------~p~g~v  351 (437)
                      ..+...|+.+|..+++.+..+..+++..     +.++.++++. +...       ..+     ...        ....|+
T Consensus       170 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v  249 (342)
T d1y1pa1         170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSA  249 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEH
T ss_pred             CCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeH
Confidence            3345779999999998887666665432     2223344431 1000       000     000        011389


Q ss_pred             HHHHHHHHHHhc---cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhh
Q 013761          352 LDRYEGLVLSVG---GNGRSYVLILEAGPSADRSQSKLYFARFSTKV  395 (437)
Q Consensus       352 ~D~~~gi~l~~~---~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~  395 (437)
                      +|++++++.++.   ..|+.| +.  .+.   ..++.|+++.+.+..
T Consensus       250 ~Dva~~~i~~l~~~~~~g~~~-~~--~~~---~~t~~eia~~i~k~~  290 (342)
T d1y1pa1         250 VDIGLLHLGCLVLPQIERRRV-YG--TAG---TFDWNTVLATFRKLY  290 (342)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEE-EE--CCE---EECHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhhcCccccceEE-EE--cCC---ceEHHHHHHHHHHHc
Confidence            999999988883   234444 42  222   467899999998875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.77  E-value=1.3e-18  Score=166.16  Aligned_cols=203  Identities=12%  Similarity=0.073  Sum_probs=135.2

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHhc----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      ++|++|++|||||++|||+++|++|+++|++|++++|+.++   +   .++....++.++++|++|+++++++++.    
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999998652   1   2233456788999999999999988874    


Q ss_pred             ---ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 ---CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                         +|+||||||+....         |++.+++|+.|++++++++      ++.|.....+.      .++..+++....
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~g~------~Iv~isS~~~~~  150 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA------IKYFVENDIKG------TVINMSSVHEKI  150 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCCC------EEEEECCGGGTS
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHH------hhhhccccccc------cccccccchhcc
Confidence               49999999985432         6789999999999999999      55554333221      244555554433


Q ss_pred             eccCcccchhhhhhhhcccchhhhhccccc------ceeeeeeeccCccc-----eecccc--CCC---cccHHHHHHHH
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSETGD------AVFSGYVFTRGGYV-----ELSKKL--SLP---LGCTLDRYEGL  358 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~-----~i~~~~--~~p---~g~v~D~~~gi  358 (437)
                      ..|+  ...|..+|.+...+......+++.      .+.++.+.++....     .....+  ..|   .+..+|+++++
T Consensus       151 ~~~~--~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v  228 (261)
T d1geea_         151 PWPL--FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVA  228 (261)
T ss_dssp             CCTT--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             cCcc--ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            3343  556888887766655444333332      34444443332100     000000  112   23567888777


Q ss_pred             HHHhc-----cCCcEEEEEc
Q 013761          359 VLSVG-----GNGRSYVLIL  373 (437)
Q Consensus       359 ~l~~~-----~~Ge~y~l~l  373 (437)
                      +..+.     -.|+...+.+
T Consensus       229 ~fL~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         229 AWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhcCCcCCeEEECC
Confidence            66552     3577777743

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=1.4e-18  Score=165.30  Aligned_cols=149  Identities=11%  Similarity=0.098  Sum_probs=112.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.  +   .++..+.++.++++|++|+++++++++.       
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999998652  1   2334456889999999999999988765       


Q ss_pred             ccEEEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          227 CNKIIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +|+||||||+....        |++.+++|+.|++++++++      ++.|.....+       .++..+++......|+
T Consensus        89 iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~g-------~Ii~isS~~~~~~~~~  155 (255)
T d1fmca_          89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLV------APEMEKNGGG-------VILTITSMAAENKNIN  155 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTCCCTT
T ss_pred             CCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHH------Hhhhcccccc-------ccccccccchhccccc
Confidence            49999999975432        6789999999999999998      5555433322       3455555444333333


Q ss_pred             cccchhhhhhhhcccchhhhhccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                        ...|..+|.+...+......+.
T Consensus       156 --~~~Y~asKaal~~lt~~lA~el  177 (255)
T d1fmca_         156 --MTSYASSKAAASHLVRNMAFDL  177 (255)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --cccchhHHHHHHHHHHHHHHHh
Confidence              5568888877666654444443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.77  E-value=1.7e-18  Score=164.29  Aligned_cols=151  Identities=19%  Similarity=0.152  Sum_probs=111.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH----hhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV----DMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~----~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +|++|++|||||++|||+++|++|+++|++|++++|+.+.  +..    +..+.++.++.+|++|+++++++++.     
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999999999999999999998762  112    22356788999999999999988865     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|+||||||+....         |++.+++|+.|++++++++      ++.|.....|       +++..++..... 
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~G-------~Ii~i~S~~~~~-  147 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREA------FSLLRESDNP-------SIINIGSLTVEE-  147 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHTTCSSC-------EEEEECCGGGTC-
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhh------hhcccccccc-------cccccccchhcc-
Confidence              49999999975322         6779999999999999999      6666544433       355554433211 


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .+......|..+|.+...+......+.
T Consensus       148 ~~~~~~~~Y~asKaal~~lt~~lA~e~  174 (251)
T d1vl8a_         148 VTMPNISAYAASKGGVASLTKALAKEW  174 (251)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCccccchHHHHHhHHHHHHHHHHHh
Confidence            111124568888877666654443333

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.77  E-value=2.4e-18  Score=164.05  Aligned_cols=150  Identities=16%  Similarity=0.093  Sum_probs=113.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+.  +.   +......+.++.+|++|+++++++++.      
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999999998652  22   223355788999999999999887753      


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|+||||||+....         |++++++|+.|++++++++      ++.|.....|       +++..++......
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~G-------~Ii~isS~~~~~~  151 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA------HPFLKASERG-------NVVFISSVSGALA  151 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTSSE-------EEEEECCGGGTSC
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeec------cchhhhhccc-------ccccccccccccc
Confidence              59999999975422         6779999999999999999      5566544333       4666666555433


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|+  ...|..+|.+...+......+.
T Consensus       152 ~~~--~~~Y~asKaal~~lt~~lA~el  176 (259)
T d2ae2a_         152 VPY--EAVYGATKGAMDQLTRCLAFEW  176 (259)
T ss_dssp             CTT--CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccc--ccchHHHHHHHHHHHHHHHHHh
Confidence            343  5668888877666654444443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.77  E-value=8e-19  Score=166.40  Aligned_cols=147  Identities=16%  Similarity=0.099  Sum_probs=113.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKI  230 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~V  230 (437)
                      |+||++|||||++|||++++++|+++|++|++++|+++. +..+..  ...++++|++|+++++++++.       +|+|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI--GGAFFQVDLEDERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHH--TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence            789999999999999999999999999999999998763 222332  456789999999999988875       4999


Q ss_pred             EEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          231 IYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       231 Ih~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      |||||+....         |++.+++|+.|++++++++      ++.|.....|       ++++.++.......|+  .
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~p~m~~~~~G-------~Ii~isS~~~~~~~~~--~  145 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALA------AREMRKVGGG-------AIVNVASVQGLFAEQE--N  145 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHTTTCE-------EEEEECCGGGTSBCTT--B
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhh------cccccccccc-------cccccccccccccccc--c
Confidence            9999975432         6789999999999999999      6677654443       4666666555433343  5


Q ss_pred             chhhhhhhhcccchhhhhccc
Q 013761          302 QDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ..|..+|.+...+......++
T Consensus       146 ~~Y~asKaal~~ltk~lA~el  166 (248)
T d2d1ya1         146 AAYNASKGGLVNLTRSLALDL  166 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHh
Confidence            678888887766654444444

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.77  E-value=1.5e-18  Score=164.65  Aligned_cols=149  Identities=16%  Similarity=0.172  Sum_probs=116.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      |.+|++|||||++|||++++++|+++|++|++++|+.+.  +   .++....++.++.+|++|+++++++++.       
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            789999999999999999999999999999999998652  1   2233456789999999999999988874       


Q ss_pred             ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeecc
Q 013761          227 CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       227 ~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      +|+||||||....         .|++++++|+.|++++++++      ++.|..+..|       ++++.+++......|
T Consensus        88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~G-------~IVnisS~~~~~~~~  154 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPI------SKRMINNRYG-------RIINISSIVGLTGNV  154 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHH------HHHHHHHTCE-------EEEEECCTHHHHCCT
T ss_pred             ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhc------CcccccCCCe-------EEEEECCHHhcCCCC
Confidence            4999999997542         26789999999999999999      6666544433       577777766554444


Q ss_pred             Ccccchhhhhhhhcccchhhhhccc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      +  ...|..+|.+...+......+.
T Consensus       155 ~--~~~Y~asKaal~~ltr~lA~el  177 (251)
T d2c07a1         155 G--QANYSSSKAGVIGFTKSLAKEL  177 (251)
T ss_dssp             T--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CHHHHHHHHHHHHHHHHHHHHh
Confidence            3  5678888887776665444443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.76  E-value=4e-18  Score=160.89  Aligned_cols=146  Identities=18%  Similarity=0.181  Sum_probs=107.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..+.+  ++.++.+|++|+++++++++.       +|+
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            789999999999999999999999999999999998653  223333  577899999999999988865       499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+....         |++.+++|+.|++++++++      ++.|.....+       .++..++. .....|+  
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~~-------~i~~~ss~-~~~~~~~--  144 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAA------SEAMREKNPG-------SIVLTASR-VYLGNLG--  144 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH------HHHHTTTCCE-------EEEEECCG-GGGCCTT--
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhc------cccccccccc-------eeeeeccc-cccCCCC--
Confidence            99999985432         6789999999999999999      5555443332       12222222 1222333  


Q ss_pred             cchhhhhhhhcccchhhhhccc
Q 013761          301 FQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ...|..+|.+...+......++
T Consensus       145 ~~~Y~asKaal~~ltk~lA~el  166 (242)
T d1ulsa_         145 QANYAASMAGVVGLTRTLALEL  166 (242)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHH
Confidence            5568888877666654444443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.76  E-value=9.1e-18  Score=158.64  Aligned_cols=235  Identities=11%  Similarity=0.043  Sum_probs=148.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VIh~Ag~~~~  239 (437)
                      |+|||||||||||++|+++|.++|++|++++|+.                +|+.|.+++++++++  .|+|||+|+....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            5799999999999999999999999999999863                599999999999985  4999999987653


Q ss_pred             c-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCC-cchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhccc
Q 013761          240 I-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGK-SSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGM  313 (437)
Q Consensus       240 ~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~-~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~  313 (437)
                      .     ....+.+|+.....+.+.+......+...++.. ++.          ....+.....+..+...|+..++..+.
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~----------~~~~~~~e~~~~~~~~~~~~~k~~~e~  135 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDG----------EAKEPITEFDEVNPQSAYGKTKLEGEN  135 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCS----------CCSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ccccccchhhcccccccccccccccccccccccccccceeeec----------cccccccccccccchhhhhhhhhHHHH
Confidence            3     355788899999999998888776654444221 110          000011111122233445555554443


Q ss_pred             chhhhhcccccceeeeeeeccCccce-----------------eccccCCCcccHHHHHHHHHHHhcc-CCcEEEEEccC
Q 013761          314 DAKFELSETGDAVFSGYVFTRGGYVE-----------------LSKKLSLPLGCTLDRYEGLVLSVGG-NGRSYVLILEA  375 (437)
Q Consensus       314 ~~~~~~~~~~~~v~~g~~~~~~G~~~-----------------i~~~~~~p~g~v~D~~~gi~l~~~~-~Ge~y~l~l~~  375 (437)
                      ..    .+++......|....||...                 +..+......|++|+++++..++.. ..+.|  ++.+
T Consensus       136 ~~----~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~--~~~~  209 (281)
T d1vl0a_         136 FV----KALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTF--HCTC  209 (281)
T ss_dssp             HH----HHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEEE--ECCC
T ss_pred             HH----HHhCCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcccCce--eEeC
Confidence            32    22233333334433333110                 0000001123899999999999843 33445  4444


Q ss_pred             CCCCCCCcHHHHHHHHHhhhCCce--ecccCCCcccC--CCCCCCCCHHHHhhccceeecc
Q 013761          376 GPSADRSQSKLYFARFSTKVGFCR--VRVPFSSFRPV--KPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       376 ~~~~~~~s~~e~~~~i~~~~G~~~--v~iP~~~~r~~--~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      +.   .+|+.|+++.+.+.+|...  ..+|...+.-.  .|....||.+||+.. ++|+|+
T Consensus       210 ~~---~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~-~g~~~~  266 (281)
T d1vl0a_         210 KG---ICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELT-TGDITR  266 (281)
T ss_dssp             BS---CEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHT-TCCCCC
T ss_pred             CC---ccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHH-hCCCCC
Confidence            43   5789999999999999431  22443333211  123346899999998 788775

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.76  E-value=5.8e-19  Score=168.22  Aligned_cols=149  Identities=18%  Similarity=0.125  Sum_probs=114.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHH----hhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVV----DMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~----~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      |+||++|||||++|||+++|++|+++|++|++++|+...   +..    ...+.++.++.+|++|+++++++++.     
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999999999997542   111    22255789999999999999998875     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|+||||||+....         |++.+++|+.|++++++++      ++.|.....|       ++++.++......
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~G-------~Iv~isS~~~~~~  148 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA------LPHMKKQGFG-------RIINIASAHGLVA  148 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTSC
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchh------hhhHhhcCCc-------eEeecccccceec
Confidence              49999999985432         6779999999999999999      6666654443       5666666655444


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|+  ...|..+|.+...+......+.
T Consensus       149 ~~~--~~~Y~asKaal~~lt~~lA~el  173 (260)
T d1x1ta1         149 SAN--KSAYVAAKHGVVGFTKVTALET  173 (260)
T ss_dssp             CTT--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC--cchhhhhhhhHHHhHHHHHHHh
Confidence            443  5668888877766654444443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.76  E-value=3.5e-18  Score=162.15  Aligned_cols=144  Identities=16%  Similarity=0.199  Sum_probs=111.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..+++  +.++.++.+|++|+++++++++.       +
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            889999999999999999999999999999999998652  222222  45789999999999999988875       4


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      |+||||||.....         |++++++|+.|++++++++      ++.|.....+.      .+++.+++......|+
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~------~~~m~~~~~gg------~Ii~isS~~~~~~~~~  151 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG------IQRMKNKGLGA------SIINMSSIEGFVGDPS  151 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHTTSSSCE------EEEEECCGGGTSCCTT
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHH------HHHHHhcCCCC------ceEeeeccceeccCCC
Confidence            9999999985422         6779999999999999999      66665544331      3566666555433443


Q ss_pred             cccchhhhhhhhcccchh
Q 013761          299 TYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~  316 (437)
                        ...|..+|.+...+..
T Consensus       152 --~~~Y~asKaal~~lt~  167 (251)
T d1zk4a1         152 --LGAYNASKGAVRIMSK  167 (251)
T ss_dssp             --CHHHHHHHHHHHHHHH
T ss_pred             --chhHHHHHHHHhcchH
Confidence              5678888877665543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.76  E-value=9.9e-19  Score=166.65  Aligned_cols=148  Identities=17%  Similarity=0.157  Sum_probs=112.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH----hh-CCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV----DM-LPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~----~~-~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..    .. ...++.++++|++|+++++++++.     
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999999999998752  111    11 234788999999999999988865     


Q ss_pred             --ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 --CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 --~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                        +|+||||||+...          .|++.+++|+.|++++++++      ++.|.....|       .+++.+++....
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~G-------~Ii~isS~~~~~  148 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKV------LKIMREQGSG-------MVVNTASVGGIR  148 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCC-------EEEEECCGGGTS
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhh------HhhhhhhcCC-------CCcccccHhhcc
Confidence              4999999997432          16779999999999999998      5565543333       466666665544


Q ss_pred             eccCcccchhhhhhhhcccchhhhhcc
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ..|+  ...|..+|.+...+......+
T Consensus       149 ~~~~--~~~Y~asKaal~~lt~~lA~e  173 (258)
T d1iy8a_         149 GIGN--QSGYAAAKHGVVGLTRNSAVE  173 (258)
T ss_dssp             BCSS--BHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC--chHHHHHHHHHHHHHHHHHHH
Confidence            3443  567888887766655444333

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=5.6e-18  Score=159.88  Aligned_cols=149  Identities=19%  Similarity=0.180  Sum_probs=108.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcc---cEEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENC---NKIIY  232 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~---D~VIh  232 (437)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+.  +..+++ ..+..+.+|++|+++++++++.+   |+|||
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVn   80 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDWDATEKALGGIGPVDLLVN   80 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-CCCeEEEEeCCCHHHHHHHHHHcCCCeEEEE
Confidence            4889999999999999999999999999999999998653  223333 36888999999999999999864   99999


Q ss_pred             eccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeee-cCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          233 CATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLR-AGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       233 ~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~-~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      |||+....         |++.+++|+.|++++++++      ++.|. ....+       .++..++.......|+  ..
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~------~~~~~~~~~~g-------~ii~isS~~~~~~~~~--~~  145 (242)
T d1cyda_          81 NAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMV------ARDMINRGVPG-------SIVNVSSMVAHVTFPN--LI  145 (242)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCCE-------EEEEECCGGGTSCCTT--BH
T ss_pred             CCccccchhHHHHHHHHHHHHHHHHhccchHHHHHh------chhhhhhcccC-------cccccchhhccccCCc--cc
Confidence            99975432         6779999999999999988      33322 11111       3444444433333333  45


Q ss_pred             hhhhhhhhcccchhhhhccc
Q 013761          303 DVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|..+|.+...+......+.
T Consensus       146 ~Y~asKaal~~lt~~lA~e~  165 (242)
T d1cyda_         146 TYSSTKGAMTMLTKAMAMEL  165 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHHh
Confidence            67777776665554443333

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.75  E-value=5.8e-18  Score=161.87  Aligned_cols=150  Identities=16%  Similarity=0.149  Sum_probs=109.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+.  +..+++  ...+.++.+|++|+++++++++.       +
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            889999999999999999999999999999999998652  223333  34688899999999999998864       4


Q ss_pred             cEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          228 NKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       228 D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      |++|||||+...           .|++++++|+.|++++++++      ++.|.....+       .++..+++......
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~g-------~ii~iss~~~~~~~  150 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHA------ARVMIPAKKG-------SIVFTASISSFTAG  150 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHGGGTCE-------EEEEECCGGGTCCC
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhh------cchHhhcCCC-------Cccccccccccccc
Confidence            999999997431           15678999999999999999      5566543333       34444444433222


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ++ ....|..+|.+...+......++
T Consensus       151 ~~-~~~~Y~asKaal~~lt~~lA~el  175 (268)
T d2bgka1         151 EG-VSHVYTATKHAVLGLTTSLCTEL  175 (268)
T ss_dssp             TT-SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-cccccchhHHHHHhCHHHHHHHh
Confidence            22 22357788877666654444333

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-18  Score=164.63  Aligned_cols=145  Identities=17%  Similarity=0.136  Sum_probs=114.3

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      .++.||+||||||++|||++++++|+++|++|++++|+.+.  +   .......++..+.||++|+++++++++.     
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998762  1   2234456889999999999999988864     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|++|||||.....         +++++++|+.|++++++++      ++.|..+..|       +++..+++.+...
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------lp~m~~~~~G-------~Iv~isS~~~~~~  149 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAF------LPAMTKNNHG-------HIVTVASAAGHVS  149 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEEECCCC-CCC
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHH------hhhHHhcCCc-------eEEEeecchhcCC
Confidence              49999999986432         5679999999999999999      7777655544       5777777766544


Q ss_pred             ccCcccchhhhhhhhcccchh
Q 013761          296 RQGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~  316 (437)
                      .|+  ...|.++|.+...+..
T Consensus       150 ~~~--~~~Y~asKaal~~~~~  168 (244)
T d1yb1a_         150 VPF--LLAYCSSKFAAVGFHK  168 (244)
T ss_dssp             HHH--HHHHHHHHHHHHHHHH
T ss_pred             CCC--cHHHHHHHHHHHHHHH
Confidence            443  4567777777655543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.75  E-value=1.5e-18  Score=165.50  Aligned_cols=151  Identities=15%  Similarity=0.112  Sum_probs=114.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      .|+||++|||||++|||+++++.|+++|++|++++|+.+.  +   .++..+.++..+.+|++|+++++++++.      
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999999998652  1   2233456789999999999999988875      


Q ss_pred             -ccEEEEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 -CNKIIYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 -~D~VIh~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                       +|+||||||....          .|++.+++|+.+++++++++      ++.|.....|       +++..++......
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~------~~~m~~~~~G-------~II~isS~~~~~~  148 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV------SRQMITQNYG-------RIVNTASMAGVKG  148 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCHHHHSC
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhH------HhhhhhhcCC-------CCCeeechhhccC
Confidence             4999999997532          16779999999999999999      5555443333       4666666554433


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      .|+  ...|..+|.+...+......+.+
T Consensus       149 ~~~--~~~Y~asKaal~~ltk~lA~el~  174 (260)
T d1zema1         149 PPN--MAAYGTSKGAIIALTETAALDLA  174 (260)
T ss_dssp             CTT--BHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             Ccc--hHHHHHHHHHHHHHHHHHHHHhh
Confidence            343  56788888877666554444443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=5.2e-18  Score=154.93  Aligned_cols=209  Identities=19%  Similarity=0.176  Sum_probs=134.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCe--EEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYS--VKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~--V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +++||||||||+||++++++|+++|++  |+.+.|+++  ....+...++++.+|++|.+++.++++++|+|||+|+...
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~   80 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVP   80 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH--HHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH--HHHhccCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence            579999999999999999999999975  555667654  3345566889999999999999999999999999998643


Q ss_pred             Cc------------------hhhHHHHHHHHHHHHHHHHHhcCCceeee-ecC---------------Ccchhhhhhhhh
Q 013761          239 TI------------------TGDLFRVDYQGVYNVTKAFQDFNNKLAQL-RAG---------------KSSKSKLLLAKF  284 (437)
Q Consensus       239 ~~------------------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l-~~~---------------~~g~sk~~~~k~  284 (437)
                      ..                  ......+|+.|+.+++..+.....+.... +..               .+...+...+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
T d2q46a1          81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY  160 (252)
T ss_dssp             EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred             ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhhh
Confidence            11                  23478899999999999998877653222 110               011122222334


Q ss_pred             ccCCCCcceeeccCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc-
Q 013761          285 KSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG-  363 (437)
Q Consensus       285 v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~-  363 (437)
                      ....++.++++||+.++++.....                ...   .........    ......+++|++++++.++. 
T Consensus       161 ~~~~~~~~~ilRp~~v~g~~~~~~----------------~~~---~~~~~~~~~----~~~~~i~~~Dva~a~~~~l~~  217 (252)
T d2q46a1         161 LADSGTPYTIIRAGGLLDKEGGVR----------------ELL---VGKDDELLQ----TDTKTVPRADVAEVCIQALLF  217 (252)
T ss_dssp             HHHSSSCEEEEEECEEECSCTTSS----------------CEE---EESTTGGGG----SSCCEEEHHHHHHHHHHHTTC
T ss_pred             hhcccccceeecceEEECCCcchh----------------hhh---hccCccccc----CCCCeEEHHHHHHHHHHHhCC
Confidence            445677777777775554432100                000   000000000    00011268999999999884 


Q ss_pred             --cCCcEEEEEccCCCCCCCCcHHHHHHHHHhhhC
Q 013761          364 --GNGRSYVLILEAGPSADRSQSKLYFARFSTKVG  396 (437)
Q Consensus       364 --~~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G  396 (437)
                        ..|+.|+|..+.  .....+++++.++|.+..+
T Consensus       218 ~~~~g~~~~i~~~~--~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         218 EEAKNKAFDLGSKP--EGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GGGTTEEEEEEECC--TTTSCCCCCHHHHHTTCCC
T ss_pred             ccccCcEEEEeeCC--CCCChhHHHHHHHHHHHHh
Confidence              357888775332  1223456777777766543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.75  E-value=1.4e-18  Score=165.25  Aligned_cols=149  Identities=16%  Similarity=0.138  Sum_probs=113.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..++++.++.++.+|++|+++++++++.       +|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            789999999999999999999999999999999998762  34455677899999999999999988875       499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeec-CCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRA-GKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~-~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      ||||||+....         |++.+++|+.|++++++++      ++.|.. ...|       .+++.++.......|  
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~~~~~~~~g-------~Iv~isS~~~~~~~~--  147 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAV------ARAMIAGGRGG-------KIINMASQAGRRGEA--  147 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTSCE-------EEEEECCGGGTSCCT--
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhc------cchhHHhccCC-------ccccccchhhccccc--
Confidence            99999975422         6779999999999999987      443322 2122       466666655443333  


Q ss_pred             ccchhhhhhhhcccchhhhhccc
Q 013761          300 YFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ....|..+|.+...+......+.
T Consensus       148 ~~~~Y~asKaal~~lt~~lA~el  170 (256)
T d1k2wa_         148 LVGVYCATKAAVISLTQSAGLNL  170 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhHHHHHHHHHHHHh
Confidence            35678888877666654444433

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.6e-18  Score=158.73  Aligned_cols=148  Identities=22%  Similarity=0.178  Sum_probs=109.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcc---cEEEEe
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENC---NKIIYC  233 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~---D~VIh~  233 (437)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.  +..+++ ..+..+.+|++|+++++++++.+   |+||||
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-PGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc-CCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            799999999999999999999999999999999998663  223333 36788999999999999999864   999999


Q ss_pred             ccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeee-cCCcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          234 ATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLR-AGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       234 Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~-~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      ||.....         |++.+++|+.+++++++++      ++.+. ....|       .++..++.......|+  ...
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~------~~~~~~~~~~g-------~Ii~isS~~~~~~~~~--~~~  148 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV------ARGLIARGVPG-------AIVNVSSQCSQRAVTN--HSV  148 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCCE-------EEEEECCGGGTSCCTT--BHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHh------hhHHHHhCCcc-------eEeecccccccccccc--hhh
Confidence            9985432         6779999999999999988      43322 11122       3555555444333333  456


Q ss_pred             hhhhhhhcccchhhhhccc
Q 013761          304 VVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~  322 (437)
                      |..+|.+...+......+.
T Consensus       149 Y~asKaal~~lt~~lA~el  167 (244)
T d1pr9a_         149 YCSTKGALDMLTKVMALEL  167 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHh
Confidence            7788877666654444443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.75  E-value=3.7e-18  Score=162.05  Aligned_cols=242  Identities=13%  Similarity=0.066  Sum_probs=146.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc--cEEEEeccCCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC--NKIIYCATARST  239 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~--D~VIh~Ag~~~~  239 (437)
                      |+||||||+||||++|++.|.++|+.| .+++....            +.+|++|.+.++++++..  |+|||+||....
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            579999999999999999999998744 45554321            237999999999999865  999999997653


Q ss_pred             c-----hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccc
Q 013761          240 I-----TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMD  314 (437)
Q Consensus       240 ~-----~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~  314 (437)
                      .     +...+.+|+.++.++++++++.++++.++++........  .....|.       .|..+.+.|+.++..++..
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~--~~~~~E~-------~~~~p~~~y~~~k~~~e~~  138 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTG--DIPWQET-------DATSPLNVYGKTKLAGEKA  138 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCT--TCCBCTT-------SCCCCSSHHHHHHHHHHHH
T ss_pred             cccccCccccccccccccccchhhhhccccccccccccccccCCC--CCCCccc-------cccCCCchHhhhhhhhhhh
Confidence            2     456889999999999999999998876665432210000  0111222       2333557788888887766


Q ss_pred             hhhhhcccccceeeeeeeccCccce---e------------ccccCCCcccHHHHHHHHHHHhc------cCCcEEEEEc
Q 013761          315 AKFELSETGDAVFSGYVFTRGGYVE---L------------SKKLSLPLGCTLDRYEGLVLSVG------GNGRSYVLIL  373 (437)
Q Consensus       315 ~~~~~~~~~~~v~~g~~~~~~G~~~---i------------~~~~~~p~g~v~D~~~gi~l~~~------~~Ge~y~l~l  373 (437)
                      ......+.. .......+..+|...   +            .........|+.|+++++..++.      ..++.|++  
T Consensus       139 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~--  215 (298)
T d1n2sa_         139 LQDNCPKHL-IFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHL--  215 (298)
T ss_dssp             HHHHCSSEE-EEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEEC--
T ss_pred             HHhhhcccc-cccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccc--
Confidence            544433322 222233333333100   0            00000011267787777766541      23455544  


Q ss_pred             cCCCCCCCCcHHHHHHHHHhhhCCceec--------ccCCCcccC--CCCCCCCCHHHHhhccceeecc
Q 013761          374 EAGPSADRSQSKLYFARFSTKVGFCRVR--------VPFSSFRPV--KPDDPPMDPFLVHTMTIRFEPR  432 (437)
Q Consensus       374 ~~~~~~~~~s~~e~~~~i~~~~G~~~v~--------iP~~~~r~~--~~~~~~ld~~ki~~~gi~fep~  432 (437)
                      ++++   .++..++++.+.+..+...+.        +|...+...  .|....||.+|+++. ++|+|+
T Consensus       216 ~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~-~~~~~~  280 (298)
T d1n2sa_         216 VAGG---TTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRN-FDLILP  280 (298)
T ss_dssp             CCBS---CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHH-HTCCCC
T ss_pred             cCCC---ceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHH-HCCCCC
Confidence            4433   467889888887765411111        222222111  122347899999987 677774

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=3.1e-18  Score=163.22  Aligned_cols=150  Identities=16%  Similarity=0.057  Sum_probs=107.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.  +.   +.....++.++.+|++|+++++++++.      
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999999998652  22   223355789999999999998877753      


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|+||||||+...         .|++.+++|+.|++++++++      ++.|.....|       +++..+++.....
T Consensus        85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~G-------~Iv~isS~~~~~~  151 (259)
T d1xq1a_          85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLA------HPLLKASGCG-------NIIFMSSIAGVVS  151 (259)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHSSC-------EEEEEC-------
T ss_pred             CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhh------hhcccccccc-------ccccccccccccc
Confidence              5999999997542         26789999999999999999      6666544333       4666666555443


Q ss_pred             ccCcccchhhhhhhhcccchhhhhccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|+  ...|..+|.+...+......+.
T Consensus       152 ~~~--~~~Y~asKaal~~lt~~lA~e~  176 (259)
T d1xq1a_         152 ASV--GSIYSATKGALNQLARNLACEW  176 (259)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccc--cccccccccchhhhhHHHHHHh
Confidence            333  5668888877766654444443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.8e-18  Score=164.17  Aligned_cols=148  Identities=20%  Similarity=0.181  Sum_probs=110.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+.  +..+++ ..+.++.+|++|+++++++++.       +|
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-PGAVFILCDVTQEDDVKTLVSETIRRFGRLD   81 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-CCCeEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            3889999999999999999999999999999999998663  222333 4688999999999999988875       49


Q ss_pred             EEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccC
Q 013761          229 KIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQG  298 (437)
Q Consensus       229 ~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~  298 (437)
                      +||||||.....          |++.+++|+.|++++++++      ++.|.... |       .+++.+++......|+
T Consensus        82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~p~m~~~~-G-------~Ii~isS~~~~~~~~~  147 (250)
T d1ydea1          82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA------LPYLRKSQ-G-------NVINISSLVGAIGQAQ  147 (250)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHT-C-------EEEEECCHHHHHCCTT
T ss_pred             EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHh------hHHHHhCC-C-------CCcccccccccccccC
Confidence            999999964311          6779999999999999999      56664321 1       3566565544433333


Q ss_pred             cccchhhhhhhhcccchhhhhccc
Q 013761          299 TYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       299 ~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                        ...|..+|.+...+......+.
T Consensus       148 --~~~Y~asKaal~~lt~~lA~e~  169 (250)
T d1ydea1         148 --AVPYVATKGAVTAMTKALALDE  169 (250)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --cchhHHHHhhHHHHHHHHHHHh
Confidence              5567888777666554444433

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.74  E-value=3.9e-18  Score=162.16  Aligned_cols=149  Identities=21%  Similarity=0.100  Sum_probs=109.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------c
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------C  227 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~  227 (437)
                      .||++|||||++|||++++++|+++|++|++++|+.+.  +   .+.....++.++++|++|+++++++++.       +
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            37999999999999999999999999999999998652  1   2233456789999999999999988875       4


Q ss_pred             cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeee--cCCcchhhhhhhhhccCCCCcceeec
Q 013761          228 NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLR--AGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       228 D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~--~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      |+||||||+....         |++++++|+.|++++++++      ++++.  ....+       .++..++.......
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~p~~~~~~~~~g-------~Ii~i~S~~~~~~~  147 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQV------LKAGGMLERGTG-------RIVNIASTGGKQGV  147 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HTTTSHHHHTEE-------EEEEECCGGGTSCC
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHH------hHHHHHHhcCCc-------cccccccccccccc
Confidence            9999999975422         6789999999999999999      44321  11111       34555554443333


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      |+  ...|..+|.+...+......+.+
T Consensus       148 ~~--~~~Y~asKaal~~ltk~lA~el~  172 (257)
T d2rhca1         148 VH--AAPYSASKHGVVGFTKALGLELA  172 (257)
T ss_dssp             TT--CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cc--chhHHHHHHHHHHHHHHHHHHhh
Confidence            33  55677777776665544444443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.73  E-value=1.6e-17  Score=157.78  Aligned_cols=146  Identities=18%  Similarity=0.189  Sum_probs=104.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|||||++|||++++++|+++|++|++++|+.+.  +   .++....++.++++|++|+++++++++.       +|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            678999999999999999999999999999998762  1   2233456889999999999999988865       499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+....         |++.+++|+.|++++++++      ++.|.....+      ..++..++.......|+  
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~~------g~Iv~isS~~~~~~~~~--  147 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA------VEAFKKEGHG------GKIINACSQAGHVGNPE--  147 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTSC------EEEEEECCGGGTSCCTT--
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhh------cchhhhhccc------cccccccchhhcccCcc--
Confidence            99999975422         6789999999999999998      4443322111      12444444443322332  


Q ss_pred             cchhhhhhhhcccchhhhhcc
Q 013761          301 FQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ...|..+|.+...+......+
T Consensus       148 ~~~Y~asKaal~~ltk~lA~e  168 (255)
T d1gega_         148 LAVYSSSKFAVRGLTQTAARD  168 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhCHHHHHhhHHHHHHH
Confidence            456777777665555433333

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.73  E-value=1.2e-17  Score=157.49  Aligned_cols=188  Identities=13%  Similarity=0.069  Sum_probs=126.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCe-------EEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc---
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYS-------VKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN---  226 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~-------V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~---  226 (437)
                      ++||||||++|||++++++|+++|++       |++.+|+.+.  +.   ++..+..+.++.+|++|+++++++++.   
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999997       8889998652  12   223355788999999999999988875   


Q ss_pred             ----ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          227 ----CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                          +|+||||||.....         |++++++|+.|++++++++      ++.|.....|       .+++.+++...
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~G-------~Ii~isS~~~~  148 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQAL------FALMERQHSG-------HIFFITSVAAT  148 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGT
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHH------hHHHHhcCCC-------ceEEEechhhc
Confidence                49999999975422         6779999999999999999      7777654433       46666666554


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhccc---cc---ceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhccC
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSET---GD---AVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGN  365 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~---~~---~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~~~  365 (437)
                      ...|+  ...|..+|.+...+......+.   +.   .+.+|.+.++.-. .......-....-+|+++.++..+..+
T Consensus       149 ~~~~~--~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~-~~~~~~~~~~~~PedvA~~v~~l~s~~  223 (240)
T d2bd0a1         149 KAFRH--SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG-KVDDEMQALMMMPEDIAAPVVQAYLQP  223 (240)
T ss_dssp             SCCTT--CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC-CCCSTTGGGSBCHHHHHHHHHHHHTSC
T ss_pred             CCCCC--ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh-hcCHhhHhcCCCHHHHHHHHHHHHcCC
Confidence            44443  5678888877665554333333   22   3344444333210 001111111123567888777766543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.72  E-value=3.9e-18  Score=163.50  Aligned_cols=150  Identities=19%  Similarity=0.222  Sum_probs=107.4

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hC---CCCeEEEEecCCCHHHHHHHHhc--
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---ML---PRSVEIVLGDVGDPCTLKAAVEN--  226 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~---~~~v~~v~~Dltd~~~v~~a~~~--  226 (437)
                      |.|++|++|||||++|||+++|++|+++|++|++++|+.+.  +..+   ..   ..++.++.+|++|+++++++++.  
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999998752  2222   22   23688999999999999988874  


Q ss_pred             -----ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCC
Q 013761          227 -----CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSAD  288 (437)
Q Consensus       227 -----~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~s  288 (437)
                           +|++|||||....             .|++.+++|+.|++++++++      ++.|..+..+       .++..+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~------~p~m~~~~g~-------iI~~~S  147 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV------KPHLVASKGE-------IVNVSS  147 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEECC
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhh------cccccccCCc-------cccccc
Confidence                 4999999997532             16678999999999999999      5555432211       122222


Q ss_pred             CCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          289 SLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       289 sl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      +.......|+  ...|..+|.+...+......+
T Consensus       148 s~a~~~~~~~--~~~Y~asKaal~~ltk~lA~e  178 (272)
T d1xkqa_         148 IVAGPQAQPD--FLYYAIAKAALDQYTRSTAID  178 (272)
T ss_dssp             GGGSSSCCCS--SHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccccCCCC--cchhhhHHHHHHHHHHHHHHH
Confidence            2222222332  456777877766555444433

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.72  E-value=4.2e-18  Score=161.77  Aligned_cols=143  Identities=16%  Similarity=0.158  Sum_probs=113.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..++++....++++|++|+++++++++.       +|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            789999999999999999999999999999999998662  34455677888999999999999988875       499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      ||||||+....         |++.+++|+.|++++++++      ++.|.... |       .+++.+++......|  .
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~------~~~m~~~~-G-------~Iv~isS~~~~~~~~--~  147 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG------IAAMKETG-G-------SIINMASVSSWLPIE--Q  147 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHTTTC-E-------EEEEECCGGGTSCCT--T
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH------HHHHHhcC-C-------ceecccchhhhcCcc--c
Confidence            99999975422         6789999999999999999      66664321 2       467767665543333  3


Q ss_pred             cchhhhhhhhcccchhh
Q 013761          301 FQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~  317 (437)
                      ...|..+|.+...+...
T Consensus       148 ~~~Y~asKaal~~lt~~  164 (253)
T d1hxha_         148 YAGYSASKAAVSALTRA  164 (253)
T ss_dssp             BHHHHHHHHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHH
Confidence            56788888776655543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.6e-17  Score=154.80  Aligned_cols=145  Identities=17%  Similarity=0.162  Sum_probs=115.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      |++|+||||||||+||++|+++|+++|.  +|++++|+..... ......+....+|+.+.+++.++++++|+|||+||.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~-~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-EEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC-SGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc-ccccceeeeeeecccccccccccccccccccccccc
Confidence            5678999999999999999999999995  8999999764211 111236788889999999999999999999999987


Q ss_pred             CCCc--hhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--------CcchhhhhhhhhccCCCCc-ceeeccCcccchh
Q 013761          237 RSTI--TGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--------KSSKSKLLLAKFKSADSLN-GWEVRQGTYFQDV  304 (437)
Q Consensus       237 ~~~~--~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--------~~g~sk~~~~k~v~~ssl~-~~i~rP~~~~~~y  304 (437)
                      ....  ...+.++|+.++.+++++|.+.+++ +.+++..        .|+.+|...|+.+...+.. ++++||+.++++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~  170 (232)
T d2bkaa1          91 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDR  170 (232)
T ss_dssp             CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTT
T ss_pred             cccccchhhhhhhcccccceeeecccccCccccccCCccccccCccchhHHHHHHhhhccccccccceEEecCceeecCC
Confidence            5432  4567899999999999999999987 5555431        2567788888888777765 7889999776553

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=7.4e-17  Score=153.34  Aligned_cols=252  Identities=12%  Similarity=0.015  Sum_probs=151.4

Q ss_pred             EEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHH-HHHHH-----hcccEEEEecc
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCT-LKAAV-----ENCNKIIYCAT  235 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~-v~~a~-----~~~D~VIh~Ag  235 (437)
                      ||||||+||||++|++.|+++|+ +|+++++-.... ........    .+|..+.+. ....+     ..+++|+|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN----IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC----CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccc----hhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999999999996 688887543321 11111111    123233332 22222     34589999998


Q ss_pred             CCCCc---hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcc
Q 013761          236 ARSTI---TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAG  312 (437)
Q Consensus       236 ~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~  312 (437)
                      .....   .......|+.++.++++++...++++...++.....         ...........+..+.+.|+.+|+.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~---------~~~~~~~~~~~~~~~~~~Y~~~K~~~e  148 (307)
T d1eq2a_          78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG---------GRTSDFIESREYEKPLNVYGYSKFLFD  148 (307)
T ss_dssp             CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGT---------TCCSCBCSSGGGCCCSSHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc---------cccccccccccccccccccccccchhh
Confidence            65432   455788889999999999999999865554321110         000000001122335678999999999


Q ss_pred             cchhhhhcccccceeeeeeeccCcccee----------------c--cccC---------CCcccHHHHHHHHHHHhc-c
Q 013761          313 MDAKFELSETGDAVFSGYVFTRGGYVEL----------------S--KKLS---------LPLGCTLDRYEGLVLSVG-G  364 (437)
Q Consensus       313 ~~~~~~~~~~~~~v~~g~~~~~~G~~~i----------------~--~~~~---------~p~g~v~D~~~gi~l~~~-~  364 (437)
                      .....+..+++..+...++++.||....                .  +...         .+..|+.|+++++...+. .
T Consensus       149 ~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~  228 (307)
T d1eq2a_         149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG  228 (307)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred             hhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhc
Confidence            9998888888888888888887773110                0  0010         122389999999998884 3


Q ss_pred             CCcEEEEEccCCCCCCCCcHHHHHHHHHhhhCCcee-cccCCCccc-CCCCCCCCCHHHHhhccceeecccC
Q 013761          365 NGRSYVLILEAGPSADRSQSKLYFARFSTKVGFCRV-RVPFSSFRP-VKPDDPPMDPFLVHTMTIRFEPRRQ  434 (437)
Q Consensus       365 ~Ge~y~l~l~~~~~~~~~s~~e~~~~i~~~~G~~~v-~iP~~~~r~-~~~~~~~ld~~ki~~~gi~fep~~~  434 (437)
                      ....|.+  +++.   ..+++|+++.+.+..+...+ .+|+....+ ........|.+|++++ ++|+|+..
T Consensus       229 ~~~~~~~--~~~~---~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~-~~~~p~~s  294 (307)
T d1eq2a_         229 VSGIFNL--GTGR---AESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAA-GYDKPFKT  294 (307)
T ss_dssp             CCEEEEE--SCSC---CBCHHHHHHHC---------------------CCCSCCBCCHHHHHT-TCCCCCCC
T ss_pred             ccccccc--cccc---chhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHH-HCCCCCCC
Confidence            3445544  4443   56899999999877652222 244433322 2233345699999999 88999753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.71  E-value=8.2e-18  Score=161.63  Aligned_cols=149  Identities=21%  Similarity=0.202  Sum_probs=110.7

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |+||+||||||++|||++++++|+++|++|++++|+.+.  +..++++.++..+.+|++|.++++++++.       +|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            789999999999999999999999999999999998762  33344566889999999999999988764       499


Q ss_pred             EEEeccCCCC--------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          230 IIYCATARST--------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       230 VIh~Ag~~~~--------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                      +|||||+...              .|++++++|+.|++++++++      ++.|.... +       .++...+......
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~------~p~m~~~~-g-------~iI~i~S~~~~~~  148 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKAC------LPALVASR-G-------NVIFTISNAGFYP  148 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHT-C-------EEEEECCGGGTST
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHH------HHHHHhcC-C-------CceeeeechhccC
Confidence            9999997421              15678999999999999999      55654322 1       2444444333322


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      .|+  ...|..+|.+...+......+.+
T Consensus       149 ~~~--~~~Y~asKaal~~ltr~lA~ela  174 (276)
T d1bdba_         149 NGG--GPLYTAAKHAIVGLVRELAFELA  174 (276)
T ss_dssp             TSS--CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCC--CchHHHHHHHHHHHHHHHHHHhh
Confidence            333  45688888776665544444443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.71  E-value=4.3e-17  Score=153.57  Aligned_cols=103  Identities=26%  Similarity=0.355  Sum_probs=90.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccE
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNK  229 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~  229 (437)
                      |++|++|||||+++||+++|+.|+++|++|++.+|+.+.  +..++++.++.++++|++|+++++++++.       +|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            789999999999999999999999999999999998763  34566777899999999999999988874       499


Q ss_pred             EEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          230 IIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       230 VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      +|||||.....         |++.+++|+.+++++++++..
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~  123 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE  123 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccccccccccchhhhhcccccccccccccccccccccccc
Confidence            99999975322         677999999999999999844

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.71  E-value=5.2e-17  Score=154.22  Aligned_cols=205  Identities=17%  Similarity=0.142  Sum_probs=133.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHh----hC-CCCeEEEEecCC-CHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVD----ML-PRSVEIVLGDVG-DPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~----~~-~~~v~~v~~Dlt-d~~~v~~a~~~----  226 (437)
                      +|++|+||||||++|||+++|++|+++|++|++++|+.+. +...    .. ...+.++.+|++ +.++++++++.    
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            4889999999999999999999999999999999887652 2111    12 347889999998 66677776654    


Q ss_pred             ---ccEEEEeccCCCC-chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          227 ---CNKIIYCATARST-ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~-~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                         +|+||||||.... .|++++++|+.|++++++++      ++.|.....+.    ...++..++..+....|  ...
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~------~~~m~~~~~~~----~g~Ii~isS~~~~~~~~--~~~  149 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAI------LDFWDKRKGGP----GGIIANICSVTGFNAIH--QVP  149 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHH------HHHHCGGGTCC----CEEEEEECCGGGTSCCT--TSH
T ss_pred             cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHH------HHHhhhcccCC----CceEEEEechhhccCCC--CCH
Confidence               4999999998654 48999999999999999999      66664332110    01456666555432223  355


Q ss_pred             hhhhhhhhcccchhhhhccc---c---cceeeeeeeccCc-----cceecc-----ccCCCcccHHHHHHHHHHHh--cc
Q 013761          303 DVVAFKYDAGMDAKFELSET---G---DAVFSGYVFTRGG-----YVELSK-----KLSLPLGCTLDRYEGLVLSV--GG  364 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~---~---~~v~~g~~~~~~G-----~~~i~~-----~~~~p~g~v~D~~~gi~l~~--~~  364 (437)
                      .|..+|.+...+......+.   +   +.+.|+.+.++.-     ......     .+..+..-.+++++.++..+  ..
T Consensus       150 ~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~~  229 (254)
T d1sbya1         150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCCC
Confidence            68888876655543333332   2   2455555544311     000000     01112223566777777666  35


Q ss_pred             CCcEEEEEcc
Q 013761          365 NGRSYVLILE  374 (437)
Q Consensus       365 ~Ge~y~l~l~  374 (437)
                      .|+.+.+.++
T Consensus       230 tG~vi~vdgG  239 (254)
T d1sbya1         230 NGAIWKLDLG  239 (254)
T ss_dssp             TTCEEEEETT
T ss_pred             CCCEEEECCC
Confidence            7888877654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.71  E-value=3.3e-17  Score=155.84  Aligned_cols=104  Identities=21%  Similarity=0.271  Sum_probs=88.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH----HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV----VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~----~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.  +.    .+..+.++.++.+|++|+++++++++.     
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4889999999999999999999999999999999998762  12    223356789999999999999988864     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHh
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                        +|++|||||.....         |++.+++|+.|++++++++.+
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK  131 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcc
Confidence              49999999975422         677999999999999998843

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.71  E-value=2e-17  Score=157.41  Aligned_cols=151  Identities=17%  Similarity=0.146  Sum_probs=113.3

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      +|+||+||||||++|||++++++|+++|++|++++|+.+.  +   ........+.++.+|++|.++++++++.      
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999999998752  2   2233456788999999999999887753      


Q ss_pred             --ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          227 --CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       227 --~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                        +|+||||||....         .|.+++++|+.+++++++++      ++.|.....+       .++..++......
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~------~~~m~~~~~g-------~ii~isS~~~~~~  149 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA------YPLLKASQNG-------NVIFLSSIAGFSA  149 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTSE-------EEEEECCGGGTSC
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccc------cccccccccc-------ccccccccccccc
Confidence              4999999997543         26789999999999999998      4444433222       3555555554433


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcccc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      .|+  ...|..+|.+...+......+++
T Consensus       150 ~~~--~~~Y~~sK~al~~lt~~lA~el~  175 (258)
T d1ae1a_         150 LPS--VSLYSASKGAINQMTKSLACEWA  175 (258)
T ss_dssp             CTT--CHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccc--chhHHHHHHHHHHHHHHHHHhcC
Confidence            343  56788888777766655555544

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.2e-17  Score=157.73  Aligned_cols=103  Identities=17%  Similarity=0.264  Sum_probs=86.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh----hC----CCCeEEEEecCCCHHHHHHHHhc--
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD----ML----PRSVEIVLGDVGDPCTLKAAVEN--  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~----~~----~~~v~~v~~Dltd~~~v~~a~~~--  226 (437)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.  +..+    ..    ..++.++.+|++|+++++++++.  
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            899999999999999999999999999999999998652  1111    11    34788999999999999988864  


Q ss_pred             -----ccEEEEeccCCCC---------chhhHHHHHHHHHHHHHHHHHh
Q 013761          227 -----CNKIIYCATARST---------ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       227 -----~D~VIh~Ag~~~~---------~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                           +|+||||||....         .|++++++|+.|++++++++.+
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~  138 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS  138 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHH
Confidence                 4999999997542         2677999999999999999943

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.70  E-value=1.2e-17  Score=157.70  Aligned_cols=146  Identities=18%  Similarity=0.182  Sum_probs=110.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      ++||||||++|||++++++|+++|++|++.+++.++   +   .++..+.++.++++|++|+++++++++.       +|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999998765432   1   1223356788999999999999988874       49


Q ss_pred             EEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCc
Q 013761          229 KIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGT  299 (437)
Q Consensus       229 ~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~  299 (437)
                      +||||||.....         |++.+++|+.|++++++++      ++.|.....|       ++++.+++......|+ 
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~G-------~IVnisS~~~~~~~~~-  147 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA------TKIMMKKRKG-------RIINIASVVGLIGNIG-  147 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCTHHHHCCTT-
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHH------HHHHHHcCCc-------EEEEEcChhhcCCCCC-
Confidence            999999975432         6789999999999999999      6666544333       5777777665444443 


Q ss_pred             ccchhhhhhhhcccchhhhhccc
Q 013761          300 YFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       300 ~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                       ...|..+|.+...+......++
T Consensus       148 -~~~Y~asKaal~~ltk~lA~el  169 (244)
T d1edoa_         148 -QANYAAAKAGVIGFSKTAAREG  169 (244)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHChHHHHHHH
Confidence             5678888877766655444444

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.70  E-value=1.3e-17  Score=159.06  Aligned_cols=148  Identities=16%  Similarity=0.191  Sum_probs=105.8

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhh---C---CCCeEEEEecCCCHHHHHHHHhc----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDM---L---PRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~---~---~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +..++   .   ...+.++.+|++|+++++++++.    
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999998652  22222   2   23589999999999999988875    


Q ss_pred             ---ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCC
Q 013761          227 ---CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSL  290 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl  290 (437)
                         +|+||||||....             .|++.+++|+.|++++++++      ++.|.....        .++...+.
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~------~p~m~~~~g--------~iI~~~S~  148 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKA------VPHLSSTKG--------EIVNISSI  148 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTC--------EEEEECCT
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhh------CCccccccC--------cceeeeee
Confidence               4999999997421             26779999999999999999      555543322        23332222


Q ss_pred             -cceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          291 -NGWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       291 -~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                       ......|+  ...|..+|.+...+......+.
T Consensus       149 ~~~~~~~~~--~~~Y~asKaal~~lt~~lA~el  179 (264)
T d1spxa_         149 ASGLHATPD--FPYYSIAKAAIDQYTRNTAIDL  179 (264)
T ss_dssp             TSSSSCCTT--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCC--chhhhhhhhhHHHHHHHHHHHh
Confidence             22222332  4568888887766654443433

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.70  E-value=1.8e-17  Score=159.05  Aligned_cols=148  Identities=16%  Similarity=0.236  Sum_probs=106.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHh---hC---CCCeEEEEecCCCHHHHHHHHhc----
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVD---ML---PRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~---~~---~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.  +..+   ..   ...+.++.+|++|+++++++++.    
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999998652  1222   22   23688999999999999988865    


Q ss_pred             ---ccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcc
Q 013761          227 ---CNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNG  292 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~  292 (437)
                         +|++|||||....           .|++.+++|+.|++++++++      ++.|.....+       .++..++...
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~------~~~m~~~~~g-------~ii~~ss~~~  148 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKT------KEHLIKTKGE-------IVNVSSIVAG  148 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCE-------EEEECCGGGS
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccc------cccccccccc-------cccchhhhhc
Confidence               4999999996421           16779999999999999999      5555433222       2333333332


Q ss_pred             eeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          293 WEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       293 ~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      ....|+  ...|..+|.+...+......+
T Consensus       149 ~~~~~~--~~~Y~asKaal~~ltk~lA~e  175 (274)
T d1xhla_         149 PQAHSG--YPYYACAKAALDQYTRCTAID  175 (274)
T ss_dssp             SSCCTT--SHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCC--CceehhhhhHHHHHHHHHHHH
Confidence            222332  456778887766555433333

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.4e-17  Score=155.72  Aligned_cols=149  Identities=18%  Similarity=0.169  Sum_probs=106.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH---hhC--CCCeEEEEecCCCHHHHHHHHhc----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV---DML--PRSVEIVLGDVGDPCTLKAAVEN----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~---~~~--~~~v~~v~~Dltd~~~v~~a~~~----  226 (437)
                      .|++|++|||||++|||+++|+.|+++|++|++.+|+.+.  +..   +..  ...+.++++|++|+++++++++.    
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3789999999999999999999999999999999998752  222   222  34688899999999999988875    


Q ss_pred             ---ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCccee
Q 013761          227 ---CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWE  294 (437)
Q Consensus       227 ---~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i  294 (437)
                         +|+||||||.....         |+..+++|+.+++++++++      ++.+......     -.+++..+++....
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~------~~~~~~~~~~-----~g~Ii~isS~~~~~  155 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA------YQSMKERNVD-----DGHIININSMSGHR  155 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHTTCC-----SCEEEEECCGGGTS
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHH------HHHHHHhccC-----CCceEEEechHhcC
Confidence               49999999975321         6779999999999999988      4443321110     01345555444333


Q ss_pred             eccCcccchhhhhhhhcccchhh
Q 013761          295 VRQGTYFQDVVAFKYDAGMDAKF  317 (437)
Q Consensus       295 ~rP~~~~~~y~~sk~a~~~~~~~  317 (437)
                      ..|......|..+|.+...+...
T Consensus       156 ~~p~~~~~~Y~~sKaal~~ltr~  178 (257)
T d1xg5a_         156 VLPLSVTHFYSATKYAVTALTEG  178 (257)
T ss_dssp             CCSCGGGHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHhCHHH
Confidence            33443344577777776655543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.5e-17  Score=154.47  Aligned_cols=145  Identities=18%  Similarity=0.156  Sum_probs=109.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC-----CCCeEEEEecCCCHHHHHHHHhc------
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML-----PRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      .||++|||||++|||++++++|+++|++|++++|+.+.  +...++     +..+.++.+|++|+++++++++.      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999998762  222221     34688999999999999988864      


Q ss_pred             -ccEEEEeccCCCC-chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          227 -CNKIIYCATARST-ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       227 -~D~VIh~Ag~~~~-~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                       +|+||||||+... .|++.+++|+.+++++++++      ++.|.....+.    ...+++.+++......|+  ...|
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~------~~~m~~~~~~~----~g~Iv~isS~~~~~~~~~--~~~Y  149 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLG------LDYMSKQNGGE----GGIIINMSSLAGLMPVAQ--QPVY  149 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHH------HHHHCGGGTCC----CEEEEEECCGGGTSCCTT--CHHH
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHH------HHHHHHhhcCC----CcEEEeeccHhhccCCCC--ccch
Confidence             4999999998654 48899999999999999999      55554332110    014666666655433343  5678


Q ss_pred             hhhhhhcccchh
Q 013761          305 VAFKYDAGMDAK  316 (437)
Q Consensus       305 ~~sk~a~~~~~~  316 (437)
                      ..+|.+...+..
T Consensus       150 ~asKaal~~ltr  161 (254)
T d2gdza1         150 CASKHGIVGFTR  161 (254)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            888877665543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=1.9e-17  Score=161.29  Aligned_cols=149  Identities=19%  Similarity=0.123  Sum_probs=111.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-----------HHHhhCCCCeEEEEecCCCHHHHHHHHhc-
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-----------EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-----------~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-  226 (437)
                      |+||++|||||++|||++++++|+++|++|++.+|+.+.           +..+++......+.+|++|.++++++++. 
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            789999999999999999999999999999999886431           11222233445667899998887777653 


Q ss_pred             ------ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 ------CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 ------~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                            +|+||||||+....         |++++++|+.|++++++++      ++.|..+.+|       ++++.+++.
T Consensus        85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~------~p~m~~~~~G-------~IV~isS~~  151 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAA------WDHMKKQNYG-------RIIMTASAS  151 (302)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHTCE-------EEEEECCHH
T ss_pred             HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHh------HHHHHhCCCc-------EEEEeCChh
Confidence                  59999999986432         6789999999999999999      7777655444       577777765


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .....|+  ...|..+|.+...+......+.
T Consensus       152 ~~~~~~~--~~~Y~asKaal~~lt~~la~E~  180 (302)
T d1gz6a_         152 GIYGNFG--QANYSAAKLGLLGLANTLVIEG  180 (302)
T ss_dssp             HHHCCTT--CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCCC--cHHHHHHHHHHHHHHHHHHHHH
Confidence            5443443  5678888887766654444443

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.67  E-value=1.3e-16  Score=151.53  Aligned_cols=146  Identities=16%  Similarity=0.118  Sum_probs=105.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH------HHHhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ------EVVDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~------~~~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |.||+||||||++|||+++++.|+++|++|++.+++.+.      +.++..+..+.++.+|++|+++++++++.      
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999999999988776542      12334466889999999999999988874      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce-ee
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW-EV  295 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~-i~  295 (437)
                       +|+||||||.....         |++.+++|+.+++++++++      ++.|.....         .+...+.... ..
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------~~~m~~~g~---------~iii~s~~~~~~~  148 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG------LKHCRRGGR---------IILTSSIAAVMTG  148 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHEEEEEE---------EEEECCGGGTCCS
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhh------hhhhhcCCc---------ccccccccccccC
Confidence             49999999985432         6679999999999999999      555543211         1111111111 11


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      .|+  ...|..+|.+...+......+
T Consensus       149 ~~~--~~~Y~asK~al~~l~r~lA~e  172 (259)
T d1ja9a_         149 IPN--HALYAGSKAAVEGFCRAFAVD  172 (259)
T ss_dssp             CCS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--chhHHHHHHHHHHHHHHHHHH
Confidence            232  456777887666555444333

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=9e-17  Score=151.68  Aligned_cols=101  Identities=19%  Similarity=0.206  Sum_probs=83.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhc--------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVEN--------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--------  226 (437)
                      |+.|+||||||++|||++++++|+++|+  .|++.+|+.+.  +..+....++.++.+|++|.++++++++.        
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            3568999999999999999999999995  68888998763  33333456899999999999998877652        


Q ss_pred             -ccEEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHH
Q 013761          227 -CNKIIYCATARSTI----------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa  259 (437)
                       +|+||||||+....          +++.+++|+.|++++++++
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  124 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL  124 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHH
Confidence             59999999975321          5679999999999999998

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.66  E-value=3.3e-16  Score=148.19  Aligned_cols=148  Identities=14%  Similarity=0.074  Sum_probs=108.0

Q ss_pred             CCCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCcH-HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKADQ-EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~~-~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +|++|++|||||+|  |||++++++|+++|++|++.+|+++. +.   .........++++|++|+++++++++.     
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            58999999999997  89999999999999999999998652 11   111234677899999999999988864     


Q ss_pred             --ccEEEEeccCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          227 --CNKIIYCATARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       227 --~D~VIh~Ag~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                        +|++|||||....             .|...+++|+.+++.+++++      ++.|..+  |       .++..++..
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~------~~~~~~~--G-------~Iv~isS~~  149 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA------EPLLREG--G-------GIVTLTYYA  149 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH------TTTEEEE--E-------EEEEEECGG
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHH------HHHhccC--C-------EEEEEeehH
Confidence              4999999997421             14568999999999999998      5555432  1       345555544


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .....|+  ...|..+|.+...+......+.
T Consensus       150 ~~~~~~~--~~~Y~asKaal~~ltr~lA~el  178 (256)
T d1ulua_         150 SEKVVPK--YNVMAIAKAALEASVRYLAYEL  178 (256)
T ss_dssp             GTSBCTT--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCC--chHHHHHHHHHHHHHHHHHHHh
Confidence            4333343  5668888877766654444444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.66  E-value=4.5e-16  Score=145.74  Aligned_cols=197  Identities=15%  Similarity=0.115  Sum_probs=123.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCH-HHHHHHHhcccEEEEeccCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDP-CTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~-~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.  +++.  ...++.+|+++. +.+.+.+..+|+||||||..
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~--l~~~--~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL--LKRS--GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHT--CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHhc--CCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            789999999999999999999999999999999998542  3333  346788999864 33444445679999999975


Q ss_pred             CCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhh
Q 013761          238 STI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFK  308 (437)
Q Consensus       238 ~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk  308 (437)
                      ...         |++.+++|+.+++++++++      ++.|.....|       .++..++.....  +......|..+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------~~~m~~~~~G-------~ii~i~S~~~~~--~~~~~~~Y~asK  142 (234)
T d1o5ia_          78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNY------LPAMKEKGWG-------RIVAITSFSVIS--PIENLYTSNSAR  142 (234)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCGGGTS--CCTTBHHHHHHH
T ss_pred             CCcchhhhhhHHHHHHhhhhhhhhhhhhhcc------cccccccccc-------cccccccccccc--cccccccchhHH
Confidence            322         6778999999999999999      5555433322       344444433222  222345677777


Q ss_pred             hhcccchhhhhccccc------ceeeeeeeccCccc---e-ecccc--CCC---cccHHHHHHHHHHHhc-----cCCcE
Q 013761          309 YDAGMDAKFELSETGD------AVFSGYVFTRGGYV---E-LSKKL--SLP---LGCTLDRYEGLVLSVG-----GNGRS  368 (437)
Q Consensus       309 ~a~~~~~~~~~~~~~~------~v~~g~~~~~~G~~---~-i~~~~--~~p---~g~v~D~~~gi~l~~~-----~~Ge~  368 (437)
                      .+...+......+.+.      .+.++.+.++.-..   . ....+  ..|   .+..+|+++.++..+.     -.|+.
T Consensus       143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~  222 (234)
T d1o5ia_         143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT  222 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcE
Confidence            7666555444333322      33444444332100   0 00000  122   2356788887766552     24777


Q ss_pred             EEEEcc
Q 013761          369 YVLILE  374 (437)
Q Consensus       369 y~l~l~  374 (437)
                      ..+.++
T Consensus       223 i~vDGG  228 (234)
T d1o5ia_         223 IVVDGG  228 (234)
T ss_dssp             EEESTT
T ss_pred             EEECcc
Confidence            767443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.65  E-value=1.9e-16  Score=149.22  Aligned_cols=156  Identities=13%  Similarity=0.076  Sum_probs=105.9

Q ss_pred             CCEEEEECCCChHHHHHHHHHH---HCCCeEEEEecCCcH-HHHh---hCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          161 NTTVLVVGATSRIGRIVIRKLM---LRGYSVKALVRKADQ-EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll---~~G~~V~~~~R~~~~-~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      ||+||||||++|||+++|++|+   ++|++|++.+|+.+. +.++   ....++.++.+|++|+++++++++.       
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            6899999999999999999997   479999999998762 1111   2246899999999999999877653       


Q ss_pred             --ccEEEEeccCCCCc----------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchh----hhhhhhhccCCCC
Q 013761          227 --CNKIIYCATARSTI----------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKS----KLLLAKFKSADSL  290 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~----------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~s----k~~~~k~v~~ssl  290 (437)
                        +|+||||||+....          +++++++|+.|++++++++      ++.|........    ......+++.+++
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~------~p~l~~~~~~~~~~~~~~~~g~ii~i~S~  155 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC------LPLLKKAAKANESQPMGVGRAAIINMSSI  155 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHH------HHHHHHhhhcccccccccccccccccccc
Confidence              49999999974321          5568999999999999999      555532110000    0000134444444


Q ss_pred             cceee-ccCcccchhhhhhhhcccchhhhhccc
Q 013761          291 NGWEV-RQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       291 ~~~i~-rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ...+. .|......|..+|.+...+......+.
T Consensus       156 ~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~  188 (248)
T d1snya_         156 LGSIQGNTDGGMYAYRTSKSALNAATKSLSVDL  188 (248)
T ss_dssp             GGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence            33221 222234578899888776664443333

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.64  E-value=6.7e-16  Score=147.50  Aligned_cols=148  Identities=18%  Similarity=0.141  Sum_probs=106.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |+||++|||||++|||++++++|+++|++|++++|+.++   +   .++.....+.++++|++|++++.++++.      
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999999999987652   1   2233456789999999999999988875      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                       +|++|||||.....         |.+.+++|+.+++++++++      ++.|..+..         .+...++... ..
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~------~~~m~~~g~---------~i~i~s~~~~-~~  159 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA------YKHLEIGGR---------LILMGSITGQ-AK  159 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHSCTTCE---------EEEECCGGGT-CS
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccc------ccccccccc---------cccccccccc-cc
Confidence             49999999975432         5678999999999999999      444443211         1111222111 12


Q ss_pred             cCcccchhhhhhhhcccchhhhhccc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      +......|..+|.+...+......++
T Consensus       160 ~~~~~~~Y~asKaal~~ltk~lA~e~  185 (272)
T d1g0oa_         160 AVPKHAVYSGSKGAIETFARCMAIDM  185 (272)
T ss_dssp             SCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHh
Confidence            22234557778777665554444433

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=3.2e-16  Score=148.58  Aligned_cols=146  Identities=14%  Similarity=0.152  Sum_probs=107.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHH---CCCeEEEEecCCcH--HHHhh-----CCCCeEEEEecCCCHHHHHHHHhc-
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLML---RGYSVKALVRKADQ--EVVDM-----LPRSVEIVLGDVGDPCTLKAAVEN-  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~---~G~~V~~~~R~~~~--~~~~~-----~~~~v~~v~~Dltd~~~v~~a~~~-  226 (437)
                      .|.+|+++||||++|||++++++|++   +|++|++++|+.+.  +..++     ...++.++.+|++|+++++++++. 
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            48899999999999999999999986   79999999998762  22222     234788999999999999988743 


Q ss_pred             ----------ccEEEEeccCCCC------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhh
Q 013761          227 ----------CNKIIYCATARST------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKF  284 (437)
Q Consensus       227 ----------~D~VIh~Ag~~~~------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~  284 (437)
                                .|++|||||....            .|++++++|+.|++++++++      ++.|......     ...+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~------~~~m~~~~~~-----~g~I  151 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGT------LNAFQDSPGL-----SKTV  151 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHH------HHTSCCCTTC-----EEEE
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHH------HHHHHhcCCC-----cccc
Confidence                      3799999997431            15678999999999999999      5555533210     0135


Q ss_pred             ccCCCCcceeeccCcccchhhhhhhhcccchh
Q 013761          285 KSADSLNGWEVRQGTYFQDVVAFKYDAGMDAK  316 (437)
Q Consensus       285 v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~  316 (437)
                      +..+++......|+  ...|..+|.+...+..
T Consensus       152 v~isS~~~~~~~~~--~~~Y~asKaal~~lt~  181 (259)
T d1oaaa_         152 VNISSLCALQPYKG--WGLYCAGKAARDMLYQ  181 (259)
T ss_dssp             EEECCGGGTSCCTT--CHHHHHHHHHHHHHHH
T ss_pred             cccccccccCCCcc--chHHHHHHHHHHHHHH
Confidence            66666554433343  5678888887766553

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.63  E-value=8.9e-15  Score=143.26  Aligned_cols=223  Identities=19%  Similarity=0.164  Sum_probs=140.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHh--hCCCCeEEEEecCCCHH-HHHHHHhcccEEEEeccC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVD--MLPRSVEIVLGDVGDPC-TLKAAVENCNKIIYCATA  236 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~--~~~~~v~~v~~Dltd~~-~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.|+|+||||||+||++|+++|+++|++|+++.|+.+.....  ....+++++.+|+.|.. .++.++.++|+++++...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            468999999999999999999999999999999987632222  22357999999999854 577888999999887643


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC------------CcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          237 RSTITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG------------KSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       237 ~~~~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~------------~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      ..       ..|+..+.++++++.+++++ +..+++.            .+...|...+.++....+.+++++|+.++..
T Consensus        82 ~~-------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_          82 QA-------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             TT-------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGG
T ss_pred             cc-------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHhhccCceeeeeceeecc
Confidence            22       13566778899999999974 4444321            1234555566667777888889999866543


Q ss_pred             hhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcc-cHHHHHHHHHHHhc-----cCCcEEEEEccCCC
Q 013761          304 VVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLG-CTLDRYEGLVLSVG-----GNGRSYVLILEAGP  377 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g-~v~D~~~gi~l~~~-----~~Ge~y~l~l~~~~  377 (437)
                      .......     ..............  ..+..     .....+.. ..+|+++++..++.     ..|+.|.+.  .  
T Consensus       155 ~~~~~~~-----~~~~~~~~~~~~~~--~~~~~-----~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~--g--  218 (350)
T d1xgka_         155 FTSLPYP-----LFQMELMPDGTFEW--HAPFD-----PDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT--F--  218 (350)
T ss_dssp             CBSSSCS-----SCBEEECTTSCEEE--EESSC-----TTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC--S--
T ss_pred             ccccccc-----ccccccccccccee--eeccc-----CCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEe--C--
Confidence            2211110     00000000000000  01100     00001111 24678777777663     248888772  2  


Q ss_pred             CCCCCcHHHHHHHHHhhhCCc--eecccCCCc
Q 013761          378 SADRSQSKLYFARFSTKVGFC--RVRVPFSSF  407 (437)
Q Consensus       378 ~~~~~s~~e~~~~i~~~~G~~--~v~iP~~~~  407 (437)
                        +.+|+.|+++.+.+.+|.+  ..++|...+
T Consensus       219 --~~~T~~eia~~l~~~~G~~v~~~~vp~~~~  248 (350)
T d1xgka_         219 --ETLSPVQVCAAFSRALNRRVTYVQVPKVEI  248 (350)
T ss_dssp             --EEECHHHHHHHHHHHHTSCEEEEECSSCCC
T ss_pred             --CcCCHHHHHHHHHHHHCCcceEEECCHHHH
Confidence              2478999999999999943  234665443

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.9e-16  Score=151.54  Aligned_cols=104  Identities=16%  Similarity=0.209  Sum_probs=85.8

Q ss_pred             CC-EEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCcH--HH---HhhCCCCeEEEEecCCCHHHHHHHHhc-------
Q 013761          161 NT-TVLVVGATSRIGRIVIRKLMLR-GYSVKALVRKADQ--EV---VDMLPRSVEIVLGDVGDPCTLKAAVEN-------  226 (437)
Q Consensus       161 ~k-~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~~R~~~~--~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~-------  226 (437)
                      || ++|||||++|||++++++|+++ |++|++.+|+.+.  +.   ++....++.++.+||+|.++++++++.       
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            44 4599999999999999999986 8999999998762  22   233356789999999999999988765       


Q ss_pred             ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeee
Q 013761          227 CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLR  270 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~  270 (437)
                      +|+||||||+....         ++..+++|+.|++++++++      ++.|.
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~------lp~m~  128 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL------LPLIK  128 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHH------GGGEE
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH------HHHHH
Confidence            49999999986432         5568999999999999999      66664

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.63  E-value=1.1e-15  Score=145.51  Aligned_cols=221  Identities=11%  Similarity=0.013  Sum_probs=137.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---H---HHh-hCCCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---E---VVD-MLPRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~---~~~-~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      .++||||||||+||++|+++|+++|++|++++|+...   .   ... ....+++++.+|++|.+.+.+++++++++||+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            4579999999999999999999999999999997541   1   111 12457899999999999999999999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-ceeeeecC---------------CcchhhhhhhhhccCCCCcceeecc
Q 013761          234 ATARSTITGDLFRVDYQGVYNVTKAFQDFNN-KLAQLRAG---------------KSSKSKLLLAKFKSADSLNGWEVRQ  297 (437)
Q Consensus       234 Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gv-kl~~l~~~---------------~~g~sk~~~~k~v~~ssl~~~i~rP  297 (437)
                      ++....      ..|..++.++++++.+.+. ++.+.+.-               .+...+..+++.....++++.+++|
T Consensus        83 ~~~~~~------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~  156 (312)
T d1qyda_          83 LAGGVL------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS  156 (312)
T ss_dssp             CCCSSS------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEEC
T ss_pred             hhhccc------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEecc
Confidence            975432      2355566778888877764 44333321               0122333344555677788888888


Q ss_pred             CcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc---cCCcEEEEEcc
Q 013761          298 GTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG---GNGRSYVLILE  374 (437)
Q Consensus       298 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l~  374 (437)
                      +.+++.+... .  ........       .........|......    ...+++|++++++.++.   ..++.+.+ ++
T Consensus       157 ~~~~g~~~~~-~--~~~~~~~~-------~~~~~~~~~~~g~~~~----~~i~v~Dva~a~~~~l~~~~~~~~~~~~-~~  221 (312)
T d1qyda_         157 NMFAGYFAGS-L--AQLDGHMM-------PPRDKVLIYGDGNVKG----IWVDEDDVGTYTIKSIDDPQTLNKTMYI-RP  221 (312)
T ss_dssp             CEEHHHHTTT-S--SCTTCCSS-------CCSSEECCBTTSCSEE----EEECHHHHHHHHHHHTTCGGGSSSEEEC-CC
T ss_pred             ceeecCCccc-h--hhHHHHhh-------hccccccccccccccc----ceeeHHHHHHHHHHHhcCccccCceEEE-eC
Confidence            7554432110 0  00000000       0000011111111111    12379999999999883   23454322 22


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhCCc--eecccCC
Q 013761          375 AGPSADRSQSKLYFARFSTKVGFC--RVRVPFS  405 (437)
Q Consensus       375 ~~~~~~~~s~~e~~~~i~~~~G~~--~v~iP~~  405 (437)
                      .+   +.+|++|+++.+.+.+|.+  ...+|..
T Consensus       222 ~~---~~~s~~e~~~~~~~~~g~~~~~~~i~~~  251 (312)
T d1qyda_         222 PM---NILSQKEVIQIWERLSEQNLDKIYISSQ  251 (312)
T ss_dssp             GG---GEEEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred             CC---cCCCHHHHHHHHHHHHCCCCeEEECCHH
Confidence            22   1468999999999999843  2335543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.9e-16  Score=150.45  Aligned_cols=146  Identities=21%  Similarity=0.174  Sum_probs=107.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe---cCCcH-----HHHhhC---CCCeEEEEecCCCHHHHHHHHhcc--
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALV---RKADQ-----EVVDML---PRSVEIVLGDVGDPCTLKAAVENC--  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~---R~~~~-----~~~~~~---~~~v~~v~~Dltd~~~v~~a~~~~--  227 (437)
                      .|+||||||++|||+++++.|+++|++|+.++   |+.+.     +..+.+   +..+..+.+|++|.++++++++.+  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            47899999999999999999999998865554   44321     112222   457899999999999999998764  


Q ss_pred             ---cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceee
Q 013761          228 ---NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEV  295 (437)
Q Consensus       228 ---D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~  295 (437)
                         |+||||||.....         |++++++|+.|++++++++      ++.|.....|       .+++.+|+.+...
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~------lp~m~~~~~G-------~Iv~isS~~g~~~  148 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAF------LPDMKRRGSG-------RVLVTGSVGGLMG  148 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEEEEGGGTSC
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHH------HHHHHHcCCC-------ceEEEechhhcCC
Confidence               9999999975432         6779999999999999999      7777654433       4666666655443


Q ss_pred             ccCcccchhhhhhhhcccchhhhhcc
Q 013761          296 RQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       296 rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                      .|+  ...|..+|.+...+......+
T Consensus       149 ~~~--~~~Y~asKaal~~l~~~la~E  172 (285)
T d1jtva_         149 LPF--NDVYCASKFALEGLCESLAVL  172 (285)
T ss_dssp             CTT--CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--chHHHHHHHHHHHHHHHHHHH
Confidence            443  567888888777665443333

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1e-15  Score=144.38  Aligned_cols=151  Identities=14%  Similarity=0.050  Sum_probs=110.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC--CCCeEEEEecCCCHHHHHHHHhc---ccEEEE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML--PRSVEIVLGDVGDPCTLKAAVEN---CNKIIY  232 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~---~D~VIh  232 (437)
                      .|.+|++|||||+++||+++++.|+++|++|++++|+++.  ++++  ...+....+|+.+.+.++.+.+.   +|+|||
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~--l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn   80 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESK--LQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFN   80 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHhccCCceeeeeccccccccccccccccceeEEe
Confidence            3889999999999999999999999999999999998653  2221  23678889999999888877765   599999


Q ss_pred             eccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccch
Q 013761          233 CATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQD  303 (437)
Q Consensus       233 ~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~  303 (437)
                      |||.....         |+..+++|+.+++.+++++      ++.|.....+       +++..+++.... +|......
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~------~~~~~~~~~g-------~Ii~isS~~~~~-~~~~~~~~  146 (245)
T d2ag5a1          81 VAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAF------LPKMLAQKSG-------NIINMSSVASSV-KGVVNRCV  146 (245)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCE-------EEEEECCSBTTT-BCCTTBHH
T ss_pred             cccccCCCChhhCCHHHHHHHHHHhhccchhHHHhh------CcccccCCCc-------eeeeeechhhcc-CCccchhH
Confidence            99975432         6779999999999999999      4444433222       344444433211 23334566


Q ss_pred             hhhhhhhcccchhhhhccccc
Q 013761          304 VVAFKYDAGMDAKFELSETGD  324 (437)
Q Consensus       304 y~~sk~a~~~~~~~~~~~~~~  324 (437)
                      |..+|.+.+.+......+++.
T Consensus       147 Y~~sKaal~~l~r~lA~e~~~  167 (245)
T d2ag5a1         147 YSTTKAAVIGLTKSVAADFIQ  167 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhh
Confidence            888888877776655555543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.6e-15  Score=144.71  Aligned_cols=145  Identities=19%  Similarity=0.185  Sum_probs=107.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HH----HhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EV----VDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~----~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |.||++|||||++|||+++|++|+++|++|++++|+.+.  +.    .......+..+.+|+.+.+.+...++.      
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            799999999999999999999999999999999998762  11    122355788899999999888776654      


Q ss_pred             -ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeec
Q 013761          227 -CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       227 -~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                       .|+++||||.....         +++.+++|+.|++.+++++      ++.|... .|       .++..++..+....
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~------lp~m~~~-~G-------~ii~isS~~~~~~~  157 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA------LPMLKQS-NG-------SIVVVSSLAGKVAY  157 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHH-TC-------EEEEEEEGGGTSCC
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHH------HHHHHhc-CC-------cceEeccchhcCCC
Confidence             49999999975422         4568999999999999999      6666422 11       34554544443333


Q ss_pred             cCcccchhhhhhhhcccchhhhh
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFEL  319 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~  319 (437)
                      |+  ...|..+|.+...+.....
T Consensus       158 p~--~~~Y~asKaal~~~~~~La  178 (269)
T d1xu9a_         158 PM--VAAYSASKFALDGFFSSIR  178 (269)
T ss_dssp             TT--CHHHHHHHHHHHHHHHHHH
T ss_pred             CC--chHHHHHHHHHHHHHHHHH
Confidence            43  5678888887766554333

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.60  E-value=9.3e-15  Score=140.59  Aligned_cols=102  Identities=20%  Similarity=0.182  Sum_probs=84.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH----hhCCCCeEEEEecCCCHHHHHHHHhc-----
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV----DMLPRSVEIVLGDVGDPCTLKAAVEN-----  226 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~----~~~~~~v~~v~~Dltd~~~v~~a~~~-----  226 (437)
                      +|+||++|||||+||||+++|++|+++|++|++++|+.+.  +..    ...+..+.++.+|++|.++++++++.     
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            4899999999999999999999999999999999998752  122    22356788999999999999887764     


Q ss_pred             --ccEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHH
Q 013761          227 --CNKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       227 --~D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa  259 (437)
                        +|+||||||.....         +...+.+|+.+...+...+
T Consensus       102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  145 (294)
T d1w6ua_         102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI  145 (294)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhh
Confidence              49999999975432         4567889999988887765

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.60  E-value=3.6e-15  Score=140.52  Aligned_cols=209  Identities=16%  Similarity=0.112  Sum_probs=131.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH----HH---Hh-hCCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ----EV---VD-MLPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~----~~---~~-~~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      +.|+||||||||+||++++++|+++|++|++++|+...    ..   .. .....+.++.+|+.+.+.+.+++++++.+|
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            35799999999999999999999999999999997642    11   11 124578999999999999999999999999


Q ss_pred             EeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCce-eeeecCC--------------cchhhhhhhhhccCCCCcceeec
Q 013761          232 YCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKL-AQLRAGK--------------SSKSKLLLAKFKSADSLNGWEVR  296 (437)
Q Consensus       232 h~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl-~~l~~~~--------------~g~sk~~~~k~v~~ssl~~~i~r  296 (437)
                      |+++...          ..++.++++++..++++. ...+...              +...+...+..+...++.+.++|
T Consensus        82 ~~~~~~~----------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r  151 (307)
T d1qyca_          82 STVGSLQ----------IESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVS  151 (307)
T ss_dssp             ECCCGGG----------SGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEE
T ss_pred             ecccccc----------cchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhccCCCceecc
Confidence            9987532          234456778888877653 2222110              11222333445556778888888


Q ss_pred             cCcccchhhhhhhhcccchhhhhcccccceeeeeeeccCccceeccccCCCcccHHHHHHHHHHHhc---cCCcEEEEEc
Q 013761          297 QGTYFQDVVAFKYDAGMDAKFELSETGDAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVG---GNGRSYVLIL  373 (437)
Q Consensus       297 P~~~~~~y~~sk~a~~~~~~~~~~~~~~~v~~g~~~~~~G~~~i~~~~~~p~g~v~D~~~gi~l~~~---~~Ge~y~l~l  373 (437)
                      |+.+++.....      .  ..............+.+.+   ....    +..+++|++++++.++.   ..++.+ .++
T Consensus       152 ~~~v~g~~~~~------~--~~~~~~~~~~~~~~~~~~~---~~~~----~~i~v~Dva~~~~~~l~~~~~~~~~~-~~~  215 (307)
T d1qyca_         152 SNCFAGYFLRS------L--AQAGLTAPPRDKVVILGDG---NARV----VFVKEEDIGTFTIKAVDDPRTLNKTL-YLR  215 (307)
T ss_dssp             CCEEHHHHTTT------T--TCTTCSSCCSSEEEEETTS---CCEE----EEECHHHHHHHHHTTSSCGGGTTEEE-ECC
T ss_pred             cceecCCCccc------h--hhhhhhhhhcccceeeecc---cccc----cCCcHHHHHHHHHHHhcChhhcCcee-EEe
Confidence            88554332110      0  0000000000001111111   1111    12379999999998884   234433 233


Q ss_pred             cCCCCCCCCcHHHHHHHHHhhhCC
Q 013761          374 EAGPSADRSQSKLYFARFSTKVGF  397 (437)
Q Consensus       374 ~~~~~~~~~s~~e~~~~i~~~~G~  397 (437)
                      +.+.   .+|+.|+++.+.+++|.
T Consensus       216 ~~~~---~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         216 LPAN---TLSLNELVALWEKKIDK  236 (307)
T ss_dssp             CGGG---EEEHHHHHHHHHHHTTS
T ss_pred             CCCC---ccCHHHHHHHHHHHHCC
Confidence            3332   57899999999999994

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=5.3e-15  Score=138.90  Aligned_cols=157  Identities=14%  Similarity=0.105  Sum_probs=113.5

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc--HHHHhhCCCCeEEEEecCCCHHHHHHHHhc-------cc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD--QEVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CN  228 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~--~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D  228 (437)
                      .++||++|||||++|||++++++|+++|++|++++|+.+  ++..+++........+|+.+.+.+++.+..       .|
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   81 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence            478999999999999999999999999999999999876  334555677888999999999888776654       38


Q ss_pred             EEEEeccCCCC---------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcce
Q 013761          229 KIIYCATARST---------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGW  293 (437)
Q Consensus       229 ~VIh~Ag~~~~---------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~  293 (437)
                      .+++++++...               .|++++++|+.+++++++++.........+.....|       .++..+++...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G-------~Ii~isS~~~~  154 (248)
T d2o23a1          82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRG-------VIINTASVAAF  154 (248)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCE-------EEEEECCTHHH
T ss_pred             ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCce-------EEEEecchhhc
Confidence            89888875321               156789999999999999994432221112111222       46666666554


Q ss_pred             eeccCcccchhhhhhhhcccchhhhhcccc
Q 013761          294 EVRQGTYFQDVVAFKYDAGMDAKFELSETG  323 (437)
Q Consensus       294 i~rP~~~~~~y~~sk~a~~~~~~~~~~~~~  323 (437)
                      ...|  ....|..+|.+...+......+.+
T Consensus       155 ~~~~--~~~~Y~asKaal~~lt~~la~e~~  182 (248)
T d2o23a1         155 EGQV--GQAAYSASKGGIVGMTLPIARDLA  182 (248)
T ss_dssp             HCCT--TCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             cCCC--CchHHHHHHHHHHHHHHHHHHHhc
Confidence            3333  356788888887766655444443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.57  E-value=8.2e-16  Score=145.49  Aligned_cols=143  Identities=11%  Similarity=-0.014  Sum_probs=102.4

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhc-------ccEEEEec
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVEN-------CNKIIYCA  234 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~-------~D~VIh~A  234 (437)
                      ++|||||++|||++++++|+++|++|++.+|+.+. +.++..  ...+..+|++|.++++++++.       +|+|||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~--~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF--AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH--HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh--hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            79999999999999999999999999999997652 111111  112345788888888777754       59999999


Q ss_pred             cCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchh
Q 013761          235 TARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDV  304 (437)
Q Consensus       235 g~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y  304 (437)
                      |....          .|++.+++|+.+++++++++      ++.|..+..|       ++++.++.......|+  ...|
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~------~~~m~~~~~G-------~IV~isS~~~~~~~~~--~~~Y  144 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV------ASQMKKRKSG-------HIIFITSATPFGPWKE--LSTY  144 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH------HHHHHHHTCC-------EEEEECCSTTTSCCTT--CHHH
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH------HHhhcccccc-------eeeccccccccccccc--cccc
Confidence            96432          15678999999999999999      6666544333       4666666655433343  5668


Q ss_pred             hhhhhhcccchhhhhccc
Q 013761          305 VAFKYDAGMDAKFELSET  322 (437)
Q Consensus       305 ~~sk~a~~~~~~~~~~~~  322 (437)
                      ..+|.+...+......+.
T Consensus       145 ~asKaal~~lt~~lA~el  162 (252)
T d1zmta1         145 TSARAGACTLANALSKEL  162 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHh
Confidence            888887766654444443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=2.2e-14  Score=130.86  Aligned_cols=135  Identities=19%  Similarity=0.143  Sum_probs=97.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHH-hcccEEEEeccCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAV-ENCNKIIYCATAR  237 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~-~~~D~VIh~Ag~~  237 (437)
                      .|+||||||||+||++|+++|+++|+  +|+++.|+....     ...+   ..++.|..++.+.+ ..+|+|||++|..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----HPRL---DNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----CTTE---ECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----cccc---cccccchhhhhhccccchheeeeeeeee
Confidence            37999999999999999999999997  677777764321     1122   34555555544443 3469999999875


Q ss_pred             CC---chhhHHHHHHHHHHHHHHHHHhcCCc-eeeeecC--------CcchhhhhhhhhccCCCCc-ceeeccCcccch
Q 013761          238 ST---ITGDLFRVDYQGVYNVTKAFQDFNNK-LAQLRAG--------KSSKSKLLLAKFKSADSLN-GWEVRQGTYFQD  303 (437)
Q Consensus       238 ~~---~~~~~~~vNv~gt~~l~~aa~~~gvk-l~~l~~~--------~~g~sk~~~~k~v~~ssl~-~~i~rP~~~~~~  303 (437)
                      ..   ....+.++|+.++.++++++++.+++ +.++++.        .|..+|...|+.+...+.+ ++++||+.++++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~  152 (212)
T d2a35a1          74 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGP  152 (212)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEEST
T ss_pred             ccccccccccccchhhhhhhcccccccccccccccccccccccccccchhHHHHHHhhhccccccccceeeCCcceeCC
Confidence            32   23568999999999999999999987 4445432        2456777778777776664 788999865543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.49  E-value=4.3e-14  Score=132.01  Aligned_cols=141  Identities=12%  Similarity=0.069  Sum_probs=100.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---------cccEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---------NCNKI  230 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---------~~D~V  230 (437)
                      ++|+||||||+||||+++++.|+++|++|++++++...+     ......+.+|..+.++++.+.+         .+|+|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            479999999999999999999999999999999876531     1233455667766665554332         25999


Q ss_pred             EEeccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcc
Q 013761          231 IYCATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTY  300 (437)
Q Consensus       231 Ih~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~  300 (437)
                      |||||....          .|++.+++|+.+++++++++      ++.|..+  |       +++..++.......|+  
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------~~~m~~~--G-------~Iv~isS~~~~~~~~~--  138 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA------TKHLKEG--G-------LLTLAGAKAALDGTPG--  138 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHH------HHHEEEE--E-------EEEEECCGGGGSCCTT--
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHH------HHhcccc--c-------ceeEEccHHHcCCccC--
Confidence            999995321          15668999999999999999      5555432  2       4666666655433343  


Q ss_pred             cchhhhhhhhcccchhhhhccc
Q 013761          301 FQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       301 ~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ...|..+|.+...+......+.
T Consensus       139 ~~~Y~asKaal~~lt~~la~El  160 (236)
T d1dhra_         139 MIGYGMAKGAVHQLCQSLAGKN  160 (236)
T ss_dssp             BHHHHHHHHHHHHHHHHHTSTT
T ss_pred             CcccHHHHHHHHHHHHHHHHHh
Confidence            5678888888777665544443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.47  E-value=3e-13  Score=127.41  Aligned_cols=104  Identities=20%  Similarity=0.255  Sum_probs=84.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc-----HHH---HhhCCCCeEEEEecCCCHHHHHHHHhcc----
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD-----QEV---VDMLPRSVEIVLGDVGDPCTLKAAVENC----  227 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~-----~~~---~~~~~~~v~~v~~Dltd~~~v~~a~~~~----  227 (437)
                      ++++|||||+||||+++++.|+++|+ +|+++.|+..     .+.   +...+..+.++.+|++|.++++++++.+    
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            46999999999999999999999998 5888888642     111   2234567999999999999999998764    


Q ss_pred             --cEEEEeccCCCCc---------hhhHHHHHHHHHHHHHHHHHhcCC
Q 013761          228 --NKIIYCATARSTI---------TGDLFRVDYQGVYNVTKAFQDFNN  264 (437)
Q Consensus       228 --D~VIh~Ag~~~~~---------~~~~~~vNv~gt~~l~~aa~~~gv  264 (437)
                        |.||||||.....         ++.++++|+.|++++.+++...+.
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~  136 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDL  136 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCC
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCC
Confidence              8999999986432         456899999999999998866543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.47  E-value=6.2e-14  Score=130.67  Aligned_cols=139  Identities=12%  Similarity=0.092  Sum_probs=98.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh---------cccEEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE---------NCNKIIY  232 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~---------~~D~VIh  232 (437)
                      .+||||||++|||++++++|+++|++|++++|+..+.     ......+.+|+.+.+......+         .+|+|||
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin   77 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   77 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----ccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence            4789999999999999999999999999999986531     1233455677776665443332         2599999


Q ss_pred             eccCCCC----------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccc
Q 013761          233 CATARST----------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQ  302 (437)
Q Consensus       233 ~Ag~~~~----------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~  302 (437)
                      |||....          .++..+++|+.+++++++++      ++.|..+  +       .++..++.......|  ...
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------~~~m~~~--g-------~Iv~isS~~~~~~~~--~~~  140 (235)
T d1ooea_          78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA------TTHLKPG--G-------LLQLTGAAAAMGPTP--SMI  140 (235)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHH------HHHEEEE--E-------EEEEECCGGGGSCCT--TBH
T ss_pred             CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhc------ccccccc--e-------EEEEeccHHhcCCcc--ccc
Confidence            9996321          14568999999999999999      5566432  1       356666554433334  367


Q ss_pred             hhhhhhhhcccchhhhhccc
Q 013761          303 DVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       303 ~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .|..+|.+...+......+.
T Consensus       141 ~Y~asKaal~~l~~~la~e~  160 (235)
T d1ooea_         141 GYGMAKAAVHHLTSSLAAKD  160 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHSTT
T ss_pred             chHHHHHHHHHHHHHHHHHh
Confidence            79999988777765444443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.41  E-value=5e-13  Score=126.91  Aligned_cols=100  Identities=26%  Similarity=0.319  Sum_probs=75.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHH---HHh----hCCCCeEE-----------------EEecCCCH
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQE---VVD----MLPRSVEI-----------------VLGDVGDP  217 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~---~~~----~~~~~v~~-----------------v~~Dltd~  217 (437)
                      .++|||||++|||++++++|+++|++|++.+|+.+..   ..+    ..+.....                 ..+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            3899999999999999999999999999998876421   111    12233333                 45668999


Q ss_pred             HHHHHHHhc-------ccEEEEeccCCCCc-----------------------hhhHHHHHHHHHHHHHHHHHh
Q 013761          218 CTLKAAVEN-------CNKIIYCATARSTI-----------------------TGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       218 ~~v~~a~~~-------~D~VIh~Ag~~~~~-----------------------~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      ++++++++.       +|+||||||.....                       +..++.+|+.+++++.+++.+
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  156 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  156 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccc
Confidence            999888763       59999999975321                       123689999999999998754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.40  E-value=1.8e-12  Score=119.92  Aligned_cols=146  Identities=21%  Similarity=0.188  Sum_probs=102.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcc------cEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENC------NKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~------D~VIh~A  234 (437)
                      .|++|||||++|||++++++|+++|++|++++|+.+.       .+...+++|+++...+..+....      +.+++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------ccceEeeccccchhhhHHHHHhhhccccccchhhhh
Confidence            3799999999999999999999999999999998652       25677889999998887776542      5666666


Q ss_pred             cCCCC-------------chhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCcceeeccCccc
Q 013761          235 TARST-------------ITGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYF  301 (437)
Q Consensus       235 g~~~~-------------~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~  301 (437)
                      +....             .+++++++|+.+...+++.+.....+...|.....|       .+++.++.......|+  .
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G-------~Ii~isS~~~~~~~~~--~  144 (241)
T d1uaya_          74 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRG-------VIVNTASVAAFEGQIG--Q  144 (241)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSE-------EEEEECCTHHHHCCTT--C
T ss_pred             hccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCce-------eeeeecchhhccCCCC--c
Confidence            54221             156789999999999999885443322223322222       4666666655433343  5


Q ss_pred             chhhhhhhhcccchhhhhccc
Q 013761          302 QDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       302 ~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      ..|..+|.+...+......+.
T Consensus       145 ~~Y~asKaal~~lt~~lA~el  165 (241)
T d1uaya_         145 AAYAASKGGVVALTLPAAREL  165 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHH
Confidence            678888887766654444443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.34  E-value=5.7e-13  Score=120.43  Aligned_cols=80  Identities=18%  Similarity=0.205  Sum_probs=68.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhC--CCCeEEEEecCCCHHHHHHHHhcccEEEEe
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDML--PRSVEIVLGDVGDPCTLKAAVENCNKIIYC  233 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~  233 (437)
                      +|.+|+|+||||+||||+++++.|+++|++|++++|+.+.  +..+.+  ...+.+..+|++|.+++++++.++|+||||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            4899999999999999999999999999999999999763  222222  124567889999999999999999999999


Q ss_pred             ccCC
Q 013761          234 ATAR  237 (437)
Q Consensus       234 Ag~~  237 (437)
                      ||+.
T Consensus       100 Ag~g  103 (191)
T d1luaa1         100 GAIG  103 (191)
T ss_dssp             CCTT
T ss_pred             Cccc
Confidence            9974

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.32  E-value=3.4e-12  Score=119.71  Aligned_cols=147  Identities=11%  Similarity=0.083  Sum_probs=99.5

Q ss_pred             CCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCcH-HHHhh---CCCCeEEEEecCCCHHHHHHHHhcc-----
Q 013761          159 AQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKADQ-EVVDM---LPRSVEIVLGDVGDPCTLKAAVENC-----  227 (437)
Q Consensus       159 l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~---~~~~v~~v~~Dltd~~~v~~a~~~~-----  227 (437)
                      |++|+||||||+|  |||+++|+.|+++|++|++.+|+++. +..++   .......+..|+++..++.+.++.+     
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            7899999999998  89999999999999999999998652 11111   2345678889999999888877643     


Q ss_pred             --cEEEEeccCCCCc--------------hhhHHHHHHHHHHHHHHHHHhcCCceeeeecCCcchhhhhhhhhccCCCCc
Q 013761          228 --NKIIYCATARSTI--------------TGDLFRVDYQGVYNVTKAFQDFNNKLAQLRAGKSSKSKLLLAKFKSADSLN  291 (437)
Q Consensus       228 --D~VIh~Ag~~~~~--------------~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~~~~~g~sk~~~~k~v~~ssl~  291 (437)
                        |++||||+.....              +...+.+|+.+...+++++.      +.+..+.         .++..++..
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~---------~Ii~iss~~  147 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACR------SMLNPGS---------ALLTLSYLG  147 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHG------GGEEEEE---------EEEEEECGG
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH------HhccCCc---------EEEEecchh
Confidence              9999999875322              23467888888888888883      3332110         123333322


Q ss_pred             ceeeccCcccchhhhhhhhcccchhhhhccc
Q 013761          292 GWEVRQGTYFQDVVAFKYDAGMDAKFELSET  322 (437)
Q Consensus       292 ~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~~  322 (437)
                      .....|  ....|..+|.+...+......+.
T Consensus       148 ~~~~~~--~~~~Y~~sKaal~~ltr~lA~el  176 (258)
T d1qsga_         148 AERAIP--NYNVMGLAKASLEANVRYMANAM  176 (258)
T ss_dssp             GTSBCT--TTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCCC--CcHHHHHHHHHHHHHHHHHHHHh
Confidence            222223  24557777776665554444443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.30  E-value=5e-12  Score=118.95  Aligned_cols=103  Identities=15%  Similarity=0.103  Sum_probs=79.4

Q ss_pred             CCCCCEEEEECCC--ChHHHHHHHHHHHCCCeEEEEecCCcH---HHHhhCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          158 GAQNTTVLVVGAT--SRIGRIVIRKLMLRGYSVKALVRKADQ---EVVDMLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       158 ~l~~k~vLVTGAt--G~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      .|.+|++|||||+  .|||++++++|+++|++|++.+|+.+.   +..+.+......+++|++++++++.+++.      
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            3789999999964  579999999999999999999998763   23344566788899999999877766553      


Q ss_pred             ----ccEEEEeccCCCCc--------------hhhHHHHHHHHHHHHHHHHH
Q 013761          227 ----CNKIIYCATARSTI--------------TGDLFRVDYQGVYNVTKAFQ  260 (437)
Q Consensus       227 ----~D~VIh~Ag~~~~~--------------~~~~~~vNv~gt~~l~~aa~  260 (437)
                          +|++|||||.....              +...+.+|+...+...+++.
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALL  134 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHh
Confidence                39999999964211              23457777777777777663

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.28  E-value=1.8e-11  Score=115.67  Aligned_cols=80  Identities=14%  Similarity=0.075  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCcH-HHHh---hCCCCeEEEEecCCCHHHHHHHHhc------
Q 013761          159 AQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKADQ-EVVD---MLPRSVEIVLGDVGDPCTLKAAVEN------  226 (437)
Q Consensus       159 l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~---~~~~~v~~v~~Dltd~~~v~~a~~~------  226 (437)
                      |++|++|||||+|  |||+++|++|+++|++|++++|+++. +..+   .......++.+|+++.++++++++.      
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            7899999999887  89999999999999999999998652 2222   2244667889999999998888754      


Q ss_pred             -ccEEEEeccCCC
Q 013761          227 -CNKIIYCATARS  238 (437)
Q Consensus       227 -~D~VIh~Ag~~~  238 (437)
                       +|++|||||...
T Consensus        83 ~id~lV~nag~~~   95 (274)
T d2pd4a1          83 SLDFIVHSVAFAP   95 (274)
T ss_dssp             CEEEEEECCCCCC
T ss_pred             CCCeEEeeccccc
Confidence             499999999753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.25  E-value=7.1e-11  Score=110.51  Aligned_cols=100  Identities=19%  Similarity=0.318  Sum_probs=71.3

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH---HHHh----hCCCCeEEEEecCCC----HHHHHHHHh------
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ---EVVD----MLPRSVEIVLGDVGD----PCTLKAAVE------  225 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~---~~~~----~~~~~v~~v~~Dltd----~~~v~~a~~------  225 (437)
                      ++|||||++|||++++++|+++|++|++++|+.+.   +..+    ........+..|+.+    .+.++++++      
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999998653   1122    224567777776654    344444443      


Q ss_pred             -cccEEEEeccCCCCc--------------------hhhHHHHHHHHHHHHHHHHHhc
Q 013761          226 -NCNKIIYCATARSTI--------------------TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       226 -~~D~VIh~Ag~~~~~--------------------~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                       .+|++|||||+....                    +..++.+|+.+...........
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARR  140 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccc
Confidence             369999999975321                    2335677777777777766443

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.18  E-value=2e-11  Score=116.51  Aligned_cols=102  Identities=12%  Similarity=0.128  Sum_probs=70.4

Q ss_pred             CCCCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecCCcHH----HHhh--------CC----CCe-EEEEecC----
Q 013761          158 GAQNTTVLVVGATS--RIGRIVIRKLMLRGYSVKALVRKADQE----VVDM--------LP----RSV-EIVLGDV----  214 (437)
Q Consensus       158 ~l~~k~vLVTGAtG--~IG~~la~~Ll~~G~~V~~~~R~~~~~----~~~~--------~~----~~v-~~v~~Dl----  214 (437)
                      +|++|++|||||+|  |||++++++|+++|++|++.+|+....    ....        ..    ... ....+|.    
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            48999999999987  999999999999999999999864310    0000        00    011 2233332    


Q ss_pred             ----------------CCHHHHHHHHh-------cccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHH
Q 013761          215 ----------------GDPCTLKAAVE-------NCNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAF  259 (437)
Q Consensus       215 ----------------td~~~v~~a~~-------~~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa  259 (437)
                                      ++...++++++       .+|+||||||....           .|.+.+++|+.+++++++++
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                            22223333333       46999999997421           15678999999999999998

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.11  E-value=6.7e-11  Score=115.32  Aligned_cols=145  Identities=12%  Similarity=0.090  Sum_probs=93.6

Q ss_pred             CCEEEEEC--CCChHHHHHHHHHHHCCCeEEEEecCCcHHH--H----hhC-----------CCCeEEEEe---------
Q 013761          161 NTTVLVVG--ATSRIGRIVIRKLMLRGYSVKALVRKADQEV--V----DML-----------PRSVEIVLG---------  212 (437)
Q Consensus       161 ~k~vLVTG--AtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~--~----~~~-----------~~~v~~v~~---------  212 (437)
                      +|++||||  ++.|||+++++.|+++|++|++.++......  .    ...           ........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            68999999  5579999999999999999999988654210  0    000           011223333         


Q ss_pred             -----------cCCCHHHHHHHHh-------cccEEEEeccCCCC-----------chhhHHHHHHHHHHHHHHHHHhcC
Q 013761          213 -----------DVGDPCTLKAAVE-------NCNKIIYCATARST-----------ITGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       213 -----------Dltd~~~v~~a~~-------~~D~VIh~Ag~~~~-----------~~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                                 |+++.++++++++       .+|+||||||....           .|...+++|+.+++++++++    
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~----  157 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYF----  157 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH----
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHH----
Confidence                       5556655665554       35999999996431           15678999999999999999    


Q ss_pred             CceeeeecCCcchhhhhhhhhccCCCCcceeeccCcccchhhhhhhhcccchhhhhcc
Q 013761          264 NKLAQLRAGKSSKSKLLLAKFKSADSLNGWEVRQGTYFQDVVAFKYDAGMDAKFELSE  321 (437)
Q Consensus       264 vkl~~l~~~~~g~sk~~~~k~v~~ssl~~~i~rP~~~~~~y~~sk~a~~~~~~~~~~~  321 (437)
                        ++.|..+  |       .++..++.......|+ +...|..+|.+.+.+......+
T Consensus       158 --~~~m~~~--G-------sIv~iss~~~~~~~p~-y~~~y~asKaal~~ltr~lA~E  203 (329)
T d1uh5a_         158 --VNIMKPQ--S-------SIISLTYHASQKVVPG-YGGGMSSAKAALESDTRVLAYH  203 (329)
T ss_dssp             --GGGEEEE--E-------EEEEEECGGGTSCCTT-CTTTHHHHHHHHHHHHHHHHHH
T ss_pred             --Hhhcccc--c-------ccccceeehhcccccc-cchhhhhhhccccccchhhHHH
Confidence              6666432  1       2444443333333343 3455778887776665444333

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.07  E-value=3.2e-10  Score=105.55  Aligned_cols=89  Identities=19%  Similarity=0.379  Sum_probs=71.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHh--------cccEEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVE--------NCNKIIY  232 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~--------~~D~VIh  232 (437)
                      ||+||||||++|||++++++|+++|++|++++|+.++            ...|+.+.+..+..+.        .+|++||
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            5899999999999999999999999999999997542            1468888877665543        2599999


Q ss_pred             eccCCCC--chhhHHHHHHHHHHHHHHHHHh
Q 013761          233 CATARST--ITGDLFRVDYQGVYNVTKAFQD  261 (437)
Q Consensus       233 ~Ag~~~~--~~~~~~~vNv~gt~~l~~aa~~  261 (437)
                      |||+...  .+.....+|..+...+.+...+
T Consensus        69 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (257)
T d1fjha_          69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLP   99 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9997543  3677888999998888876643

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.03  E-value=4.9e-06  Score=69.26  Aligned_cols=69  Identities=19%  Similarity=0.315  Sum_probs=57.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEe
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYC  233 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~  233 (437)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++.+++.  ......  .+.++.+|.+|++.++++ ++.+|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~--~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh--hhhhccCcccchhhhhhcChhhhhhhccc
Confidence            68999998 999999999999999999999998763  122222  578899999999999888 5678888875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.94  E-value=1.8e-05  Score=67.71  Aligned_cols=73  Identities=21%  Similarity=0.241  Sum_probs=57.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      .|+|+|.|| |++|+.+++.|+++|++|++++|+.+. +.+...-........+..+.......+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeec
Confidence            589999987 999999999999999999999999773 2222222345556677778888888888889888654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.92  E-value=3.9e-05  Score=65.11  Aligned_cols=102  Identities=19%  Similarity=0.166  Sum_probs=73.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH-HHHhhCCC-CeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ-EVVDMLPR-SVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~-~~~~~~~~-~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +|.|.||+|.+|++++..|+.+|.  +++++|.+... +..+.... ...... ......+..+.++++|+||..||...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~-~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVK-GYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEE-EEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCC-eEEcCCChHHHhCCCCEEEECCCcCC
Confidence            799999999999999999998884  78999986543 22222211 111112 22235666788999999999999754


Q ss_pred             Cc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          239 TI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       239 ~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .+   ..+.+..|+.-...+++.+.+++.+
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~  110 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPD  110 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCC
Confidence            32   3568999999999999999887655

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.78  E-value=3.1e-05  Score=64.03  Aligned_cols=71  Identities=18%  Similarity=0.300  Sum_probs=56.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHH-HhcccEEEEecc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAA-VENCNKIIYCAT  235 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~Ag  235 (437)
                      |+++|.|+ |.+|+++++.|.+.|++|++++.+++.  .+.+ .....++.+|.+|++.++++ ++.+|.||-+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~--~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK--VNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH--HHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHH--HHHHHHhCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            56788866 899999999999999999999987653  2222 33567788999999999888 778898876653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=0.00014  Score=56.53  Aligned_cols=89  Identities=17%  Similarity=0.203  Sum_probs=63.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.+|+|+|.|. |..|.++++.|.++|++|++.|.+...+..+.+.....+..+... .    ..+.++|.||-.-|+.
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~d~vi~SPGi~   75 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-D----EWLMAADLIVASPGIA   75 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-H----HHHHHCSEEEECTTSC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-h----hhhccCCEEEECCCCC
Confidence            578999999988 889999999999999999999987664334444445555554432 2    3456789999988874


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ...             .+++.+++.++.
T Consensus        76 ~~~-------------~~~~~a~~~gi~   90 (93)
T d2jfga1          76 LAH-------------PSLSAAADAGIE   90 (93)
T ss_dssp             TTS-------------HHHHHHHHTTCE
T ss_pred             CCC-------------HHHHHHHHcCCC
Confidence            322             256666666654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.64  E-value=1.7e-05  Score=68.22  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=32.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      |+|.|+||+|+||++|++.|++.|++|++.+|+++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            57889999999999999999999999999999876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.57  E-value=9.1e-05  Score=64.55  Aligned_cols=76  Identities=14%  Similarity=0.115  Sum_probs=54.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag  235 (437)
                      .+.+|||+||+|++|..+++.....|++|++++++.+. +..+..+....+..-|-...+.+.+...  ++|+||.+.|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            47799999999999999999888999999999987653 3444554443333333333344444433  4799999986

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.49  E-value=0.00013  Score=62.98  Aligned_cols=73  Identities=14%  Similarity=0.111  Sum_probs=52.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+++|||+||+|++|...++.+...|++|++++++++. +..+.++....   .|..+...-...-.++|+||.+.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~---i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA---ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE---EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee---eehhhhhhhhhccccccccccccc
Confidence            46799999999999999999888899999999987652 34445543322   244443333334456899999876

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00019  Score=65.04  Aligned_cols=77  Identities=19%  Similarity=0.273  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEECC----------------CChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHH
Q 013761          157 PGAQNTTVLVVGA----------------TSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTL  220 (437)
Q Consensus       157 ~~l~~k~vLVTGA----------------tG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v  220 (437)
                      .+|.|++||||+|                ||..|.+|++++..+|++|+++.-....    ..+..+..+  .+...+++
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----~~p~~~~~~--~~~t~~~m   75 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----PTPPFVKRV--DVMTALEM   75 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----CCCTTEEEE--ECCSHHHH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----Ccccccccc--eehhhHHH
Confidence            3588999999975                7999999999999999999998765431    123355544  34454444


Q ss_pred             HH----HHhcccEEEEeccCCCC
Q 013761          221 KA----AVENCNKIIYCATARST  239 (437)
Q Consensus       221 ~~----a~~~~D~VIh~Ag~~~~  239 (437)
                      .+    .+..+|++|++|++...
T Consensus        76 ~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          76 EAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHhhhccceeEeeeechhhh
Confidence            43    44567999999998653

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.48  E-value=0.001  Score=56.02  Aligned_cols=100  Identities=13%  Similarity=0.140  Sum_probs=69.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH-----H--Hhh----CCCCeEEEEecCCCHHHHHHHHhccc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE-----V--VDM----LPRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~-----~--~~~----~~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      |+|.|.||+|.+|..++..|+.+|  .+++++|++....     .  +..    ....+.....--.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            579999999999999999999998  4899999875411     1  111    122333322211122    4677889


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||-+||....+   -.+.+..|..-...+++.+.+++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~  116 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDT  116 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCC
Confidence            999999975432   3567999999888888888766544

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00034  Score=59.11  Aligned_cols=101  Identities=22%  Similarity=0.216  Sum_probs=67.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHH-CC--CeEEEEecCCcHH--HH--hhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLML-RG--YSVKALVRKADQE--VV--DMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~-~G--~~V~~~~R~~~~~--~~--~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|.|+||+|.+|++++-.|+. .+  .++.++|..+..+  ..  ...........  +...++ .+.++++|+||.+|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~--~~~~~~-~~~~~~aDvvvita   77 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDA-TPALEGADVVLISA   77 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE--ECSSCC-HHHHTTCSEEEECC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE--EEcCCC-ccccCCCCEEEECC
Confidence            5899999999999999988764 34  6899999764321  11  12211111111  111112 24678899999999


Q ss_pred             cCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          235 TARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       235 g~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |....+   -.+++..|..-...+.+.+.+++.+
T Consensus        78 G~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~  111 (145)
T d2cmda1          78 GVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK  111 (145)
T ss_dssp             SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCC
Confidence            975433   3568999999999999998776654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.44  E-value=0.00029  Score=59.56  Aligned_cols=98  Identities=14%  Similarity=0.205  Sum_probs=67.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHH--h---hCCCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVV--D---MLPRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~--~---~~~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      ..++|.|.|+ |.+|..++..|+.+|  .+|+++|++++.   +..  .   ..........+|.       +.++++|+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adi   75 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADL   75 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccE
Confidence            4679999996 999999999999988  589999998652   111  1   1122344455553       24678899


Q ss_pred             EEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          230 IIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       230 VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ||.+||.....   ..+.+..|+.-...+++.+.+++.+
T Consensus        76 vvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~  114 (146)
T d1ez4a1          76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFD  114 (146)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            99999975432   3457888998888899888777655

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00023  Score=61.32  Aligned_cols=73  Identities=14%  Similarity=0.102  Sum_probs=53.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~  233 (437)
                      .+.+|||+||+|++|...++.+...|++|++++++++. +..++++... +  .|..+.+..+++.+     ++|++|.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~-v--i~~~~~~~~~~i~~~t~~~g~d~v~d~  104 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-V--FNHREVNYIDKIKKYVGEKGIDIIIEM  104 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-E--EETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccccCccc-c--cccccccHHHHhhhhhccCCceEEeec
Confidence            46799999999999999999998999999999987652 3344454332 2  36666554444432     36999998


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      .|
T Consensus       105 ~g  106 (174)
T d1yb5a2         105 LA  106 (174)
T ss_dssp             CH
T ss_pred             cc
Confidence            75

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.30  E-value=0.00024  Score=60.89  Aligned_cols=75  Identities=25%  Similarity=0.322  Sum_probs=56.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.+++|||.|+ |.+|+.+++.|...|+ +|++..|+.+.  .....++  ..     ..+.+++.+.+..+|+||++.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~--~~-----~~~~~~~~~~l~~~Divi~at   92 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--GE-----AVRFDELVDHLARSDVVVSAT   92 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--CE-----ECCGGGHHHHHHTCSEEEECC
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh--cc-----cccchhHHHHhccCCEEEEec
Confidence            378899999998 9999999999999997 68888887552  2223332  22     224467788899999999998


Q ss_pred             cCCCCc
Q 013761          235 TARSTI  240 (437)
Q Consensus       235 g~~~~~  240 (437)
                      +...+.
T Consensus        93 ss~~~i   98 (159)
T d1gpja2          93 AAPHPV   98 (159)
T ss_dssp             SSSSCC
T ss_pred             CCCCcc
Confidence            765443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.28  E-value=0.00017  Score=62.98  Aligned_cols=97  Identities=15%  Similarity=0.145  Sum_probs=66.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcHHH-------HhhCC-CCe-EEEEecCCCHHHHHHHHh
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQEV-------VDMLP-RSV-EIVLGDVGDPCTLKAAVE  225 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~~~-------~~~~~-~~v-~~v~~Dltd~~~v~~a~~  225 (437)
                      -+|.||||+|.||++++-.|+....       .+.+++.......       +.... ... ..+.+     .+..++++
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-----~~~~~~~~   99 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-----IDPYEVFE   99 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-----SCHHHHTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-----ccchhhcc
Confidence            3799999999999999999987531       4566666543211       11111 112 22222     23457889


Q ss_pred             cccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          226 NCNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       226 ~~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      ++|+||-.||....+   ..+.+..|..-...+.+++.++.
T Consensus       100 ~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a  140 (175)
T d7mdha1         100 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVA  140 (175)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            999999999986533   46789999998899999887753

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.27  E-value=0.001  Score=56.20  Aligned_cols=98  Identities=18%  Similarity=0.299  Sum_probs=70.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HH--Hhh----CCCCeEEEEecCCCHHHHHHHHhccc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EV--VDM----LPRSVEIVLGDVGDPCTLKAAVENCN  228 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~--~~~----~~~~v~~v~~Dltd~~~v~~a~~~~D  228 (437)
                      .+++|.|.|| |.+|..++..|+..|.  +++++|++++.   +.  +..    ....+.+...|.       +.++++|
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD   76 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD   76 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence            4578999997 9999999999999884  79999987652   11  111    122344444443       3577889


Q ss_pred             EEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          229 KIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       229 ~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||.+||.....   ..+.+..|..-...+++.+.+++.+
T Consensus        77 vvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~  116 (148)
T d1ldna1          77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQ  116 (148)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCC
T ss_pred             eEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCC
Confidence            999999975433   3467889988888888888776554

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.25  E-value=0.00022  Score=61.64  Aligned_cols=73  Identities=14%  Similarity=0.161  Sum_probs=52.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHH---HH--hcccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKA---AV--ENCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~---a~--~~~D~VIh~  233 (437)
                      .+.+|||+||+|++|..+++.+...|++|++++++.+. +.++..+... +  .|..+++..++   ..  .++|++|.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~-v--i~~~~~~~~~~v~~~t~~~g~d~v~d~  101 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-V--GDSRSVDFADEILELTDGYGVDVVLNS  101 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-E--EETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccc-c--ccCCccCHHHHHHHHhCCCCEEEEEec
Confidence            36799999999999999999888899999999987652 3344444332 2  34555443333   33  247999999


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      .|
T Consensus       102 ~g  103 (183)
T d1pqwa_         102 LA  103 (183)
T ss_dssp             CC
T ss_pred             cc
Confidence            87

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00071  Score=58.88  Aligned_cols=78  Identities=12%  Similarity=0.235  Sum_probs=60.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--HH---HhhC--CCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--EV---VDML--PRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--~~---~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      ++.+|+|+|.|+ ||.|++++..|+..|. +++++.|+.+.  ..   .+.+  .........|+.+.+.+...+..+|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            368899999988 8999999999999996 78888998652  11   1111  12344567899999999999999999


Q ss_pred             EEEeccC
Q 013761          230 IIYCATA  236 (437)
Q Consensus       230 VIh~Ag~  236 (437)
                      |||+..+
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9999754

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.11  E-value=0.0011  Score=55.55  Aligned_cols=39  Identities=23%  Similarity=0.444  Sum_probs=35.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      +..+++|.|.||.|.+|+.+++.|.+.||+|.+.+|+..
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            356789999999999999999999999999999999865

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.11  E-value=0.0025  Score=53.42  Aligned_cols=96  Identities=15%  Similarity=0.167  Sum_probs=68.1

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH-----HHH--h---hCCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ-----EVV--D---MLPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~-----~~~--~---~~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      +|.|.||+|.+|.+++..|+.+|.  +++++|.....     +..  .   .......+..+|.   +    .+.++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            799999999999999999999984  78888864321     111  1   1233444444443   2    35689999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |..||....+   -.+.+..|..-...+++.+.+++.+
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~  112 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDD  112 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999975433   3468899998888888888776654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.09  E-value=0.00028  Score=61.56  Aligned_cols=73  Identities=23%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc-HHHHhhCCCCeEEEEecCCCH-HHHHHHH--hcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD-QEVVDMLPRSVEIVLGDVGDP-CTLKAAV--ENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~-~~~~~~~~~~v~~v~~Dltd~-~~v~~a~--~~~D~VIh~Ag  235 (437)
                      .+.+|||+||+|++|...++.....|++|++..++++ .+..+.++....+   |-.+. ++..+..  +++|+||.+.|
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi---~~~~~~~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL---AREDVMAERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE---ECC---------CCSCCEEEEEECST
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee---ecchhHHHHHHHhhccCcCEEEEcCC
Confidence            4678999999999999999988889999999998766 3445556544332   22221 1222222  24799999987

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.00  E-value=0.00017  Score=61.41  Aligned_cols=98  Identities=14%  Similarity=0.137  Sum_probs=63.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcHHHH-------hhC-CCCeEEEEecCCCHHHHHHHHhc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQEVV-------DML-PRSVEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~~~~-------~~~-~~~v~~v~~Dltd~~~v~~a~~~  226 (437)
                      ++|.|+||+|++|++++-.|+..+.       ...+++-....+..       ... ......+...    ....+.+++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   80 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFKD   80 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhccc
Confidence            4899999999999999999987652       12223222221111       111 1223333322    233578899


Q ss_pred             ccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcC
Q 013761          227 CNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFN  263 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~g  263 (437)
                      +|+||.+||....+   ..+.+..|+.-...+.+.+.++.
T Consensus        81 advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a  120 (154)
T d1y7ta1          81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVA  120 (154)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999986543   35688899998889998887643

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.00051  Score=59.07  Aligned_cols=73  Identities=10%  Similarity=0.020  Sum_probs=52.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHH---h--cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAV---E--NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~---~--~~D~VIh~  233 (437)
                      .+.+|||+||+|++|..+++.....|++|++++++++. +..+.++.. .+  .|..+++..+++.   .  ++|+||.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~-~v--i~~~~~d~~~~v~~~t~g~g~d~v~d~  104 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW-QV--INYREEDLVERLKEITGGKKVRVVYDS  104 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCe-EE--EECCCCCHHHHHHHHhCCCCeEEEEeC
Confidence            36799999999999999999888899999999998763 334444433 22  3666654444433   2  35999998


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      +|
T Consensus       105 ~g  106 (179)
T d1qora2         105 VG  106 (179)
T ss_dssp             SC
T ss_pred             cc
Confidence            86

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.94  E-value=0.00099  Score=57.58  Aligned_cols=73  Identities=14%  Similarity=0.172  Sum_probs=50.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC--HHHH-HHHHh-----cccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD--PCTL-KAAVE-----NCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd--~~~v-~~a~~-----~~D~  229 (437)
                      .|.+|||+|| |+||...++.+...|+ +|++++++++. +..++++....   .|..+  ..+. +++.+     ++|+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v---i~~~~~~~~~~~~~i~~~~~~~g~Dv  103 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT---LNRRETSVEERRKAIMDITHGRGADF  103 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEE---EETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEE---EeccccchHHHHHHHHHhhCCCCceE
Confidence            4679999987 9999999999999997 79999998763 34455544322   23433  2222 22222     4799


Q ss_pred             EEEeccC
Q 013761          230 IIYCATA  236 (437)
Q Consensus       230 VIh~Ag~  236 (437)
                      ||.+.|.
T Consensus       104 vid~vG~  110 (182)
T d1vj0a2         104 ILEATGD  110 (182)
T ss_dssp             EEECSSC
T ss_pred             EeecCCc
Confidence            9999875

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.94  E-value=0.0046  Score=51.39  Aligned_cols=97  Identities=19%  Similarity=0.160  Sum_probs=67.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH---HHhh--C----CCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE---VVDM--L----PRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~---~~~~--~----~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|+|| |.+|+.++..|+..|  .+++++|++++..   ....  .    .....+...  .|.    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence            47889996 999999999999988  5899999987621   1111  1    223333322  222    356788999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |.+||.....   -.+.+..|..-...+++.+.+++.+
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~  111 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKN  111 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCC
Confidence            9999975432   3457888888888888888666544

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.0014  Score=55.96  Aligned_cols=74  Identities=19%  Similarity=0.210  Sum_probs=56.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+|+|.|+ |+||...++.+...|++|++++++.+. +..+.++...   ..|..+.+......+++|++|.+.|..
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~---~i~~~~~~~~~~~~~~~D~vid~~g~~  104 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE---VVNSRNADEMAAHLKSFDFILNTVAAP  104 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE---EEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcE---EEECchhhHHHHhcCCCceeeeeeecc
Confidence            4679999986 999999999888899999999987763 3334444332   247777777776777899999998753

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0019  Score=54.15  Aligned_cols=71  Identities=24%  Similarity=0.386  Sum_probs=57.1

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHH-hhCCCCeEEEEecCCCHHHHHHHH-hcccEEEEec
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVV-DMLPRSVEIVLGDVGDPCTLKAAV-ENCNKIIYCA  234 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~-~~~~~~v~~v~~Dltd~~~v~~a~-~~~D~VIh~A  234 (437)
                      +++|.|. |-+|+.+++.|.+.|++|++++.+++.  ... .....++.++.+|.+|++.++++- +.+|.||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            6888887 899999999999999999999988752  122 223457899999999999987764 5678888765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.85  E-value=0.00014  Score=62.93  Aligned_cols=46  Identities=35%  Similarity=0.487  Sum_probs=37.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRS  206 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~  206 (437)
                      +..|||+||+|++|...++.....|++|++++++.+. +.++.++..
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad   70 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS   70 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccc
Confidence            4579999999999999998888899999999998763 444555444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.85  E-value=0.0022  Score=51.15  Aligned_cols=71  Identities=14%  Similarity=0.185  Sum_probs=53.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC-CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML-PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++++|+|||.|+ |.+|..-++.|++.|++|++++.....+..... ...+.+...+..+.     .+++++.||.+.
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at   80 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAAT   80 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECC
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHH-----HhCCCcEEeecC
Confidence            478999999987 889999999999999999999887665333222 34677777666543     255678777653

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.81  E-value=0.0058  Score=50.95  Aligned_cols=96  Identities=21%  Similarity=0.287  Sum_probs=64.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HHHhhC-----CCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EVVDML-----PRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~~~~~-----~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++|.|.|| |.+|..++-.|+.+|.  +++++|++.+.   +..+..     ........+|       .+.++++|+||
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            46888897 9999999999999884  89999987752   222221     1123333222       23577889999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ..||.....   ..+.+..|..-...+++.+.+++.+
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~  110 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNH  110 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCC
Confidence            999975432   3457888998888888888776654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.75  E-value=0.014  Score=49.10  Aligned_cols=100  Identities=16%  Similarity=0.206  Sum_probs=69.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH---HHHh------hCCCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ---EVVD------MLPRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~---~~~~------~~~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      +.++|.|.|+ |.+|+.++..|+..+ .+++++|.+++.   ....      ...........     ...+++++++|+
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~adi   79 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTGADC   79 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTTCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcCCCe
Confidence            3468999997 999999999888888 589999987752   1111      11112111111     123567889999


Q ss_pred             EEEeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          230 IIYCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       230 VIh~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ||.+||....+        -.+.+..|..-...+++.+.+++.+
T Consensus        80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~  123 (154)
T d1pzga1          80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK  123 (154)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCC
Confidence            99999975422        2457889999999999988777655

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.75  E-value=0.0048  Score=51.29  Aligned_cols=96  Identities=16%  Similarity=0.276  Sum_probs=66.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHHh-----hCCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVVD-----MLPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~~-----~~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      |+|.|.|| |.+|..++..|+.+|  .+++++|++++.   +..+     ...........|   .    +.++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            47888896 999999999998887  589999987652   1111     112234444433   2    3467889999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .+||.....   ..+.+..|..=...+++.+.+++.+
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~  109 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPD  109 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCC
Confidence            999975433   3467888888778888888776544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.74  E-value=0.011  Score=50.25  Aligned_cols=99  Identities=13%  Similarity=0.173  Sum_probs=69.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HHH--hh----CCCCeEEEEecCCCHHHHHHHHhcc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EVV--DM----LPRSVEIVLGDVGDPCTLKAAVENC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~~--~~----~~~~v~~v~~Dltd~~~v~~a~~~~  227 (437)
                      +..++|.|.|+ |.+|..++-.|+.+|.  +++++|++++.   +..  ..    .........+|   .    +.++++
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~----~~~~~a   89 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---Y----SVTANS   89 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---G----GGGTTC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---h----hhcccc
Confidence            44579999996 9999999999999995  89999987652   111  11    11222222222   2    246778


Q ss_pred             cEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          228 NKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       228 D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |+||..||....+   ..+.+..|..-...++..+.+++.+
T Consensus        90 diVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~  130 (160)
T d1i0za1          90 KIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPD  130 (160)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             cEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999975433   3457888998888888888776654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.72  E-value=0.0026  Score=54.01  Aligned_cols=76  Identities=24%  Similarity=0.285  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEe-cCCCHHHHHHHHh-----cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLG-DVGDPCTLKAAVE-----NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~-Dltd~~~v~~a~~-----~~D~VIh  232 (437)
                      .+.+|+|+| +|.||...+..+...|++|++++++++. +..+.+.....+..- .-.+.+.+.+.+.     ++|++|.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid  104 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID  104 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence            356899997 6999999999998999999999998763 334455544333221 1223444444443     3799999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       105 ~~g~  108 (170)
T d1e3ja2         105 CSGN  108 (170)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9874

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.65  E-value=0.0051  Score=51.57  Aligned_cols=96  Identities=15%  Similarity=0.161  Sum_probs=65.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcH---HHH--h----hCCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQ---EVV--D----MLPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~---~~~--~----~~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|.|+ |.+|..++..|+.+|  .+++++|++.+.   +..  .    ...........|   .    +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence            68899995 999999999999988  489999987652   111  1    122233444333   2    346788999


Q ss_pred             EEeccCCCCc-------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI-------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~-------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |-+||.....       -.+.++.|..-...+.+.+.+++.+
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~  115 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH  115 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            9999964311       2346888988888888888776544

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.0012  Score=49.47  Aligned_cols=38  Identities=26%  Similarity=0.452  Sum_probs=33.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ  197 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~  197 (437)
                      .++++||+||+|++|...++.+...|++|+++.++++.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            35689999999999999999888899999999988763

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0014  Score=56.16  Aligned_cols=72  Identities=17%  Similarity=0.225  Sum_probs=48.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+|+|||.|| ||.+++++..|.+.|.+|+++.|+.+.  ...+.+.....+...+..+.     ....+|+|||+...
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~Tp~   89 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINATSS   89 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECCSC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeeccccc
Confidence            57899999987 899999999999999999999998763  22223322111222232221     12457999998654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.55  E-value=0.00063  Score=57.78  Aligned_cols=97  Identities=15%  Similarity=0.096  Sum_probs=63.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-------eEEEEecCCcHHH---H----hhC-CCCeEEEEecCCCHHHHHHHHhc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY-------SVKALVRKADQEV---V----DML-PRSVEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~-------~V~~~~R~~~~~~---~----~~~-~~~v~~v~~Dltd~~~v~~a~~~  226 (437)
                      ++|.|+||+|.+|++++-.|+..+.       .+++++.+.....   .    ... ......+..  .  ....+.+++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~--~~~~~~~~~   79 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--T--DKEEIAFKD   79 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--E--SCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--C--cccccccCC
Confidence            4899999999999999999986542       3555555443211   1    111 112222211  1  123478889


Q ss_pred             ccEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhc
Q 013761          227 CNKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDF  262 (437)
Q Consensus       227 ~D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~  262 (437)
                      +|+||-+||....+   ..+.+..|..-...+.+...++
T Consensus        80 ~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence            99999999975543   3457889988888888877553

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0063  Score=52.38  Aligned_cols=59  Identities=15%  Similarity=0.214  Sum_probs=48.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+.-+|+-|+..|+++|++|+++......                      +.+....+|++|.++|..
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~----------------------l~~~~~~aDivi~a~G~~   93 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH----------------------LDEEVNKGDILVVATGQP   93 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS----------------------HHHHHTTCSEEEECCCCT
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc----------------------HHHHHhhccchhhccccc
Confidence            4899999999999999999999999999999988765432                      234566789999888865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus        94 ~   94 (170)
T d1a4ia1          94 E   94 (170)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.50  E-value=0.0007  Score=59.05  Aligned_cols=72  Identities=15%  Similarity=0.047  Sum_probs=46.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEE-ecCCcH--HHHhhCCCCeEEEEecCCCHHHHH---HHH-hcccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKAL-VRKADQ--EVVDMLPRSVEIVLGDVGDPCTLK---AAV-ENCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~-~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~---~a~-~~~D~VIh~  233 (437)
                      +.+|||+||+|++|+..++.....|+++++. +.+.+.  .....++...   ..|..+++..+   ++. +++|+||.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~---vi~~~~~~~~~~~~~~~~~GvDvv~D~  107 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA---AVNYKTGNVAEQLREACPGGVDVYFDN  107 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE---EEETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE---EeeccchhHHHHHHHHhccCceEEEec
Confidence            4689999999999999999887799876554 444332  1233444332   23555443332   222 247999998


Q ss_pred             cc
Q 013761          234 AT  235 (437)
Q Consensus       234 Ag  235 (437)
                      .|
T Consensus       108 vG  109 (187)
T d1vj1a2         108 VG  109 (187)
T ss_dssp             SC
T ss_pred             CC
Confidence            86

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.50  E-value=0.0021  Score=54.71  Aligned_cols=75  Identities=15%  Similarity=0.112  Sum_probs=51.8

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCC-CHHHHHHHHhcccEEEEeccCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVG-DPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dlt-d~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+|+|.|+ |++|...++.+...|++|++++++++. +..+.++.... +  |.. +.+..++..+++|++|.+.+..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~-i--~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHY-I--ATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-E--EGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEE-e--eccchHHHHHhhhcccceEEEEecCC
Confidence            4679999987 999999998888899999999998763 33444443322 2  222 2334445556689999987754


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus       103 ~  103 (168)
T d1piwa2         103 T  103 (168)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.47  E-value=0.0022  Score=54.70  Aligned_cols=72  Identities=19%  Similarity=0.123  Sum_probs=48.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhC------CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDML------PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~------~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|.|.|| |-+|..++..|++.|++|.+.+|+++. +.....      ...............++.++++++|+||.+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            78999988 999999999999999999999998652 111111      1111111111111234667889999999864

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.45  E-value=0.014  Score=48.45  Aligned_cols=97  Identities=16%  Similarity=0.131  Sum_probs=66.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCcHH---HH------hhCCCCeEEEEecCCCHHHHHHHHhcccEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKADQE---VV------DMLPRSVEIVLGDVGDPCTLKAAVENCNKI  230 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~~~---~~------~~~~~~v~~v~~Dltd~~~v~~a~~~~D~V  230 (437)
                      |+|.|.|+ |.+|.+++-.|+.+|  .+++++|++++..   ..      ........+...+  |.    +.++++|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~----~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CH----HHhccccEE
Confidence            57888896 999999999999888  4799999876521   11      1122233333321  22    367788999


Q ss_pred             EEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          231 IYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       231 Ih~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |-.||....+   ..+.+..|..-...+++.+.+++.+
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~  111 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPE  111 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCC
Confidence            9999965432   4567888988888888888776544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.38  E-value=0.016  Score=48.24  Aligned_cols=96  Identities=16%  Similarity=0.194  Sum_probs=66.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcHH---H--Hhh---CCCCeEEEEecCCCHHHHHHHHhcccEEEE
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQE---V--VDM---LPRSVEIVLGDVGDPCTLKAAVENCNKIIY  232 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~~---~--~~~---~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh  232 (437)
                      +|.|.|+ |.+|.+++..|+.+|.  +++++|++++..   .  +..   ......+...+  |.    +.++++|+||.
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVVi   75 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVVI   75 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEEE
Confidence            7888897 9999999999999984  899999876521   1  111   11223333222  22    24677899999


Q ss_pred             eccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          233 CATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       233 ~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      +||....+   ..+.+..|..-...+++.+.+++.+
T Consensus        76 taG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~  111 (143)
T d1llda1          76 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPN  111 (143)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             ecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCC
Confidence            99985433   3468889998888888888776654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.33  E-value=0.014  Score=49.03  Aligned_cols=97  Identities=10%  Similarity=0.151  Sum_probs=66.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH---HHHhh------CCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ---EVVDM------LPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~---~~~~~------~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      .+|.|.|+ |.+|.+++..|+..+ .+++++|++.+.   +....      ......+...+  +.    +.++++|+||
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEEE
Confidence            48999996 999999998888777 589999987752   11111      11223333322  22    3567789999


Q ss_pred             EeccCCCCc--------hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI--------TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~--------~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .+||....+        -.+.+..|..-...+++.+.+++.+
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~  118 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN  118 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCC
Confidence            999975422        3457899998888888888776654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.33  E-value=0.0061  Score=50.74  Aligned_cols=97  Identities=14%  Similarity=0.128  Sum_probs=62.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcHH---HHhh------CCCCeEEEEecCCCHHHHHHHHhcccEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQE---VVDM------LPRSVEIVLGDVGDPCTLKAAVENCNKII  231 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~~---~~~~------~~~~v~~v~~Dltd~~~v~~a~~~~D~VI  231 (437)
                      ++|.|.|+ |.+|.+++-.|+.++ .+++++|.+++..   ..+.      ......+...  .|.    +.++++|+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~----~~~~~advvv   74 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNY----ADTANSDVIV   74 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcH----HHhcCCCEEE
Confidence            58889996 999999999998887 5899999877621   1111      1112222221  122    2356789999


Q ss_pred             EeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          232 YCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       232 h~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      -+||....+   ..+.+..|..-...+++...+++.+
T Consensus        75 itag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~  111 (142)
T d1uxja1          75 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPN  111 (142)
T ss_dssp             ECCSCC---------CHHHHHHHHHHHHHHHGGGCTT
T ss_pred             EeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCC
Confidence            999975432   3457888888777888877665543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.01  Score=47.39  Aligned_cols=67  Identities=24%  Similarity=0.257  Sum_probs=53.1

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhc--ccEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVEN--CNKII  231 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~--~D~VI  231 (437)
                      ..+|.|.|| |.+|+-++....+.|++|++++.+.+......   .-.++.+|..|.+.+.++...  +|+|-
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v---a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV---AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc---CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            458999985 99999999999999999999998766322111   235778999999999998854  68874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.00094  Score=58.07  Aligned_cols=37  Identities=24%  Similarity=0.440  Sum_probs=33.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ  197 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~  197 (437)
                      +..|||+||+|++|...++.....|++|++++++.+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            3589999999999999999888899999999998763

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.01  Score=50.22  Aligned_cols=74  Identities=22%  Similarity=0.230  Sum_probs=52.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEEe
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIYC  233 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh~  233 (437)
                      +.+|+|.|+ |.||...+..+...|+ +|++++++++. +..++++... ++..+-.+.....+.+.     ++|++|.+
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~-~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~  104 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL-VLQISKESPQEIARKVEGQLGCKPEVTIEC  104 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE-EEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcc-cccccccccccccccccccCCCCceEEEec
Confidence            568999987 9999999999999998 79999988763 3344554433 23333345555554443     46999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      .|.
T Consensus       105 ~G~  107 (171)
T d1pl8a2         105 TGA  107 (171)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            874

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.21  E-value=0.0081  Score=51.09  Aligned_cols=99  Identities=17%  Similarity=0.214  Sum_probs=66.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCcH---HH--Hhh----CCCCeEEEEecCCCHHHHHHHHhcc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKADQ---EV--VDM----LPRSVEIVLGDVGDPCTLKAAVENC  227 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~~---~~--~~~----~~~~v~~v~~Dltd~~~v~~a~~~~  227 (437)
                      +...+|.|.|+ |.+|..++..|+..|.  +++++|++.+.   +.  +..    ..........|.       +.++++
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence            44558999996 9999999999999884  79999987652   11  111    122222223332       345778


Q ss_pred             cEEEEeccCCCCc---hhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          228 NKIIYCATARSTI---TGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       228 D~VIh~Ag~~~~~---~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      |+||..||.....   ..+.++.|..-...+++.+.+++.+
T Consensus        89 divvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~  129 (159)
T d2ldxa1          89 KLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPD  129 (159)
T ss_dssp             EEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTT
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999975433   3457888888777777777665544

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.20  E-value=0.0039  Score=52.86  Aligned_cols=74  Identities=14%  Similarity=0.156  Sum_probs=50.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-----cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-----NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-----~~D~VIh  232 (437)
                      .+.+|+|.|++|++|..++..+...| .+|++++++++. +..+.++.. .+  .|.++.+..++..+     ++|++|.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~-~~--i~~~~~~~~~~~~~~~~~~~~d~vid  103 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YV--INASMQDPLAEIRRITESKGVDAVID  103 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCc-ee--eccCCcCHHHHHHHHhhcccchhhhc
Confidence            35699999999999999999888888 488888887653 233444433 22  24444444444443     3699999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       104 ~~g~  107 (170)
T d1jvba2         104 LNNS  107 (170)
T ss_dssp             SCCC
T ss_pred             cccc
Confidence            9863

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.13  E-value=0.0033  Score=54.11  Aligned_cols=73  Identities=15%  Similarity=0.217  Sum_probs=49.2

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCH---HHHHHHHh--cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP---CTLKAAVE--NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~---~~v~~a~~--~~D~VIh  232 (437)
                      .+.+|+|.|+ |+||...++.+...|+ +|++++++++. +..+.++... +  .|..+.   +.+.+...  ++|++|.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~-~--i~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATD-I--LNYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSE-E--ECGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccc-c--ccccchhHHHHHHHHhhccCcceEEE
Confidence            3668999986 9999999998888997 68999887653 3334444322 2  244333   33444443  3799999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      ++|.
T Consensus       103 ~~g~  106 (174)
T d1jqba2         103 AGGG  106 (174)
T ss_dssp             CSSC
T ss_pred             ccCC
Confidence            9985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.12  E-value=0.008  Score=50.63  Aligned_cols=72  Identities=15%  Similarity=0.218  Sum_probs=47.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHH---HHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKA---AVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~---a~~~~D~VIh~Ag  235 (437)
                      .+.+|+|.|+ |.||...+..+...|++|++++++++. +..++++....   .|..+.+..+.   ...+.|.+|-+++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~---i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLT---VNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE---EETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCcccc---ccccchhHHHHHHHhhcCCcccccccc
Confidence            3679999886 999999999888899999999998663 34445543322   24444443333   3334455555544

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.04  E-value=0.0087  Score=51.91  Aligned_cols=66  Identities=21%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          157 PGAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       157 ~~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      +.+.+|++.|.|. |.||+.+++.|...|.+|++.+|...+.              +..-.+++++++..+|+|+.++-.
T Consensus        38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~--------------~~~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG--------------PWRFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS--------------SSCCBSCSHHHHTTCSEEEECCCC
T ss_pred             CcccCceEEEecc-ccccccceeeeecccccccccccccccc--------------ceeeeechhhhhhccchhhccccc
Confidence            3478999999976 7899999999999999999999875421              111123467899999999987754


Q ss_pred             C
Q 013761          237 R  237 (437)
Q Consensus       237 ~  237 (437)
                      .
T Consensus       103 ~  103 (181)
T d1qp8a1         103 N  103 (181)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.98  E-value=0.0043  Score=52.10  Aligned_cols=91  Identities=10%  Similarity=0.068  Sum_probs=54.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC----CeEEEEecCCcHH-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG----YSVKALVRKADQE-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G----~~V~~~~R~~~~~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ||+|.|.||||.+|+.+++.|+++.    .+++++.++.... ........  ....++.+.+    .+.++|++|.+++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~--~~~~~~~~~~----~~~~~DivF~a~~   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTT--GTLQDAFDLE----ALKALDIIVTCQG   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCC--CBCEETTCHH----HHHTCSEEEECSC
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCc--eeeecccchh----hhhcCcEEEEecC
Confidence            4689999999999999999888763    3567666554321 00011111  1123344433    4678999999884


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhcCCceeeee
Q 013761          236 ARSTITGDLFRVDYQGVYNVTKAFQDFNNKLAQLR  270 (437)
Q Consensus       236 ~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l~  270 (437)
                      ..             -...+...+.+.|.+...+.
T Consensus        75 ~~-------------~s~~~~~~~~~~g~~~~VID   96 (146)
T d1t4ba1          75 GD-------------YTNEIYPKLRESGWQGYWID   96 (146)
T ss_dssp             HH-------------HHHHHHHHHHHTTCCCEEEE
T ss_pred             ch-------------HHHHhhHHHHhcCCCeeccc
Confidence            21             12345566666676644443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.97  E-value=0.0046  Score=52.23  Aligned_cols=64  Identities=23%  Similarity=0.305  Sum_probs=43.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|.|.|+ |.+|..+++.|.+.|++|++.+|+.+. +...+... +... .|  +.    ++++.+|+||-+.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~-~~~~-~~--~~----~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL-VDEA-GQ--DL----SLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS-CSEE-ES--CG----GGGTTCSEEEECS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc-ccee-ee--ec----ccccccccccccC
Confidence            47888866 999999999999999999999998652 22222211 1111 11  11    3567889998654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.0042  Score=51.91  Aligned_cols=68  Identities=16%  Similarity=0.275  Sum_probs=45.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHH-HhhC--CCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEV-VDML--PRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~-~~~~--~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|+|.|+ |.||..++..|++.|++|.+++|+.+... ....  ............+.    +....+|+||.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~v   71 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVTL   71 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchh----hhhcccceEEEee
Confidence            68999988 99999999999999999999999876211 1111  11111111111222    4456789999875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.51  E-value=0.0051  Score=52.80  Aligned_cols=71  Identities=18%  Similarity=0.236  Sum_probs=49.2

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCC--CCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLP--RSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~--~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      +.+|+|+|.|+ ||.+++++..|.+.+.+|+++.|+.+.  ...+.+.  ..+..+..|-.       ....+|+|||+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~t   87 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINAT   87 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeecc
Confidence            67899999977 889999999999988999999998763  1122222  23444443321       235679999997


Q ss_pred             cCC
Q 013761          235 TAR  237 (437)
Q Consensus       235 g~~  237 (437)
                      ...
T Consensus        88 p~g   90 (171)
T d1p77a1          88 SAG   90 (171)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.50  E-value=0.0062  Score=52.50  Aligned_cols=72  Identities=19%  Similarity=0.267  Sum_probs=49.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhC---CC----CeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDML---PR----SVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~---~~----~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|.|.|| |-.|.+++..|++.|++|.+..|..+.+..+.+   ..    .......++.-.++++++++++|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            58889977 899999999999999999999986553222211   00    11111122333567889999999998864

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.37  E-value=0.029  Score=47.52  Aligned_cols=76  Identities=13%  Similarity=0.053  Sum_probs=49.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHH--hcccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAV--ENCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~--~~~D~VIh~A  234 (437)
                      .+.+|+|.|+ |++|...+..+...| .+|++++++++. +...+......+...|-.| .+.+.+..  .++|++|-+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~  106 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI  106 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecC
Confidence            4679999999 789999999999988 588888888763 3444444333222223222 22222333  2579999998


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      |.
T Consensus       107 G~  108 (176)
T d2jhfa2         107 GR  108 (176)
T ss_dssp             CC
T ss_pred             Cc
Confidence            75

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.36  E-value=0.015  Score=48.74  Aligned_cols=72  Identities=15%  Similarity=0.161  Sum_probs=47.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCC---HHHHHHHHhcccEEEEecc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD---PCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd---~~~v~~a~~~~D~VIh~Ag  235 (437)
                      .+.+|+|.|+ |.||...+..+...|++|++++++++. +..+.++....   .|-.+   .+.+.+...+.|.+|-+++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLV---VNPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEE---ECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCccee---cccccchhhhhcccccCCCceEEeecC
Confidence            3568999875 999999999888999999999987663 23444543322   23333   2344555556677776664

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.31  E-value=0.012  Score=51.41  Aligned_cols=69  Identities=16%  Similarity=0.183  Sum_probs=50.5

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +.+|++.|.|. |.||+.+++.|...|.+|+..++..........         ++...+++++++..+|+|+.+....
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------~~~~~~~l~~ll~~sD~i~~~~plt  115 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL---------GLQRVSTLQDLLFHSDCVTLHCGLN  115 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH---------TCEECSSHHHHHHHCSEEEECCCCC
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhh---------ccccccchhhccccCCEEEEeeccc
Confidence            78999999965 999999999999999999999986543211111         1112235677888889888776543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.25  E-value=0.011  Score=47.79  Aligned_cols=69  Identities=25%  Similarity=0.304  Sum_probs=51.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHH-HhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAA-VENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a-~~~~D~VIh~A  234 (437)
                      |+++|.|. |.+|+.+++.|  +|.+|++++.+++... .....++.++.+|.+|++.++++ ++.++.+|-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~-~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRK-KVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHH-HHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHH-HHHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            57889975 88999999998  4667888888776311 11134688999999999988875 35678888654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.20  E-value=0.011  Score=51.07  Aligned_cols=75  Identities=16%  Similarity=0.224  Sum_probs=45.9

Q ss_pred             CCEEEE-ECCCChHHHHHHHHHHHCCCeEEEEecCCcH--H---HHhhCCCCeEEEE--ecCCCH-HHHHHHH----hcc
Q 013761          161 NTTVLV-VGATSRIGRIVIRKLMLRGYSVKALVRKADQ--E---VVDMLPRSVEIVL--GDVGDP-CTLKAAV----ENC  227 (437)
Q Consensus       161 ~k~vLV-TGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~---~~~~~~~~v~~v~--~Dltd~-~~v~~a~----~~~  227 (437)
                      +.+++| +||+|++|.+.++.....|++|+++.|+.+.  +   ..++++....+..  .|..+. +.+.+..    .++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence            445555 7999999999999888899999999887652  1   2233443332221  122221 1233332    247


Q ss_pred             cEEEEecc
Q 013761          228 NKIIYCAT  235 (437)
Q Consensus       228 D~VIh~Ag  235 (437)
                      |++|.+.|
T Consensus       109 dvv~D~vg  116 (189)
T d1gu7a2         109 KLALNCVG  116 (189)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.16  E-value=0.035  Score=47.36  Aligned_cols=76  Identities=16%  Similarity=0.104  Sum_probs=51.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHHh--cccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAVE--NCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~~--~~D~VIh~A  234 (437)
                      .+.+|+|+|+ |++|...+..+...| .+|++++++++. +..++++....+-.-|-.+ .+.+.+...  ++|++|.+.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~  107 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVI  107 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeC
Confidence            4678999986 999999999999999 589999998774 3444554443322223222 233444443  479999988


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      |.
T Consensus       108 g~  109 (176)
T d1d1ta2         108 GH  109 (176)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.10  E-value=0.023  Score=48.52  Aligned_cols=59  Identities=24%  Similarity=0.367  Sum_probs=48.7

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      ++.||+|+|.|.+.-+|+-|+..|.++|++|+++.....                      .+.+....+|+||.++|..
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------~l~~~~~~ADivI~a~G~p   91 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------NLRHHVENADLLIVAVGKP   91 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------CHHHHHHHCSEEEECSCCT
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------hhHHHHhhhhHhhhhccCc
Confidence            478999999999999999999999999999998865432                      1345667789999999865


Q ss_pred             C
Q 013761          238 S  238 (437)
Q Consensus       238 ~  238 (437)
                      .
T Consensus        92 ~   92 (166)
T d1b0aa1          92 G   92 (166)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.021  Score=48.56  Aligned_cols=69  Identities=14%  Similarity=0.116  Sum_probs=50.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      +.||+++|.| .|.||+.+|+.|...|++|++.+.++-... +..-+...+        ..+++++...|++|-+.|-.
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al-~A~~dG~~v--------~~~~~a~~~adivvtaTGn~   90 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINAL-QAAMEGYEV--------TTMDEACQEGNIFVTTTGCI   90 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHTTCEE--------CCHHHHTTTCSEEEECSSCS
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhH-HhhcCceEe--------eehhhhhhhccEEEecCCCc
Confidence            7899999995 689999999999999999999999865322 211112222        23567777889998887753

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.05  E-value=0.018  Score=50.59  Aligned_cols=68  Identities=16%  Similarity=0.096  Sum_probs=50.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.+++|.|.|- |.||+.+++.|..-|.+|++.++.........           ....+++++++..+|+|+.++-.+
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~-----------~~~~~~l~~~l~~sDii~~~~plt  107 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKK-----------GYYVDSLDDLYKQADVISLHVPDV  107 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT-----------TCBCSCHHHHHHHCSEEEECSCCC
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccc-----------eeeeccccccccccccccccCCcc
Confidence            378999999965 99999999999999999999987655322111           112235777888899888877543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.02  E-value=0.075  Score=45.21  Aligned_cols=78  Identities=13%  Similarity=0.211  Sum_probs=59.1

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-H-HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-E-VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~-~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ...-+|+|.|| |-.|..-++.....|++|.++|.+.+. + ........++.   -..+.+.+++.++.+|+||.+|-+
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~---~~~~~~~l~~~~~~aDivI~aali  105 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGAVLV  105 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccccee---ehhhhhhHHHhhccCcEEEEeeec
Confidence            34468999987 899999999999999999999998763 1 11222333433   346788899999999999999987


Q ss_pred             CCCc
Q 013761          237 RSTI  240 (437)
Q Consensus       237 ~~~~  240 (437)
                      ....
T Consensus       106 pG~~  109 (168)
T d1pjca1         106 PGRR  109 (168)
T ss_dssp             TTSS
T ss_pred             CCcc
Confidence            6543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.00  E-value=0.029  Score=48.12  Aligned_cols=81  Identities=14%  Similarity=0.079  Sum_probs=56.2

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCC-eEEEEecC--CCHHHHHHHHhcccEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRS-VEIVLGDV--GDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~-v~~v~~Dl--td~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.||+|+|.|.|.-+|+-|+..|+++|+.|..+..+............ ......|+  ...+.+++....+|+||..+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav  105 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  105 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence            4899999999999999999999999999999988754321100000000 00111222  34677888888999999998


Q ss_pred             cCCC
Q 013761          235 TARS  238 (437)
Q Consensus       235 g~~~  238 (437)
                      |...
T Consensus       106 G~p~  109 (171)
T d1edza1         106 PSEN  109 (171)
T ss_dssp             CCTT
T ss_pred             CCCc
Confidence            8654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.87  E-value=0.0075  Score=50.32  Aligned_cols=33  Identities=30%  Similarity=0.368  Sum_probs=26.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC---CeEEEEecC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG---YSVKALVRK  194 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G---~~V~~~~R~  194 (437)
                      ++|.|.||||.+|+.|++.|.+++   .++..+..+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            589999999999999999997665   466666543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.86  E-value=0.033  Score=42.96  Aligned_cols=73  Identities=11%  Similarity=0.210  Sum_probs=49.2

Q ss_pred             CCCEEEEECCCChHH-HHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          160 QNTTVLVVGATSRIG-RIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG-~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      ..|++.+.|-. |+| ++||+.|.++|++|...|+.............+.+..++-  ++    .+++.|.||...|+..
T Consensus         7 ~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~----~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1           7 RVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHA--EE----HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             TCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCC--GG----GGTTCSEEEECTTSCT
T ss_pred             hCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCc--cc----cCCCCCEEEECCCcCC
Confidence            45788888764 455 7789999999999999999766422222223555555443  22    2356799999888754


Q ss_pred             C
Q 013761          239 T  239 (437)
Q Consensus       239 ~  239 (437)
                      .
T Consensus        80 ~   80 (96)
T d1p3da1          80 D   80 (96)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.81  E-value=0.0031  Score=55.21  Aligned_cols=68  Identities=13%  Similarity=0.215  Sum_probs=49.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhh------------CCCCeEEEEecCCCHHHHHHHHh
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDM------------LPRSVEIVLGDVGDPCTLKAAVE  225 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~------------~~~~v~~v~~Dltd~~~v~~a~~  225 (437)
                      |.|++|.|.|| |-.|.+++..|++.|++|.+.+|+++. +.+..            ++..+.+       ..+++++++
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~-------t~~l~~a~~   76 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-------TSDVEKAYN   76 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-------ESCHHHHHT
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccccccccc-------chhhhhccC
Confidence            45678999987 889999999999999999999998652 11111            1222322       234678899


Q ss_pred             cccEEEEec
Q 013761          226 NCNKIIYCA  234 (437)
Q Consensus       226 ~~D~VIh~A  234 (437)
                      ++|+||.+.
T Consensus        77 ~ad~iiiav   85 (189)
T d1n1ea2          77 GAEIILFVI   85 (189)
T ss_dssp             TCSCEEECS
T ss_pred             CCCEEEEcC
Confidence            999998864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.80  E-value=0.038  Score=47.69  Aligned_cols=69  Identities=23%  Similarity=0.213  Sum_probs=50.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.++++.|.| .|.||+++++.|..-|.+|+..++..........  .+.        ..+++++++.+|+|+.+.-.+
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~--~~~--------~~~l~ell~~sDiv~~~~Plt  109 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL--GIE--------LLSLDDLLARADFISVHLPKT  109 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH--TCE--------ECCHHHHHHHCSEEEECCCCS
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc--Cce--------eccHHHHHhhCCEEEEcCCCC
Confidence            36789999997 5999999999999999999999987654222211  111        124667888999988777544

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.80  E-value=0.067  Score=45.49  Aligned_cols=75  Identities=15%  Similarity=0.117  Sum_probs=48.5

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC--HHHHHHHH--hcccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD--PCTLKAAV--ENCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd--~~~v~~a~--~~~D~VIh~  233 (437)
                      .+.+|+|.|+ |+||...+..+...|+ .|++.+++++. +..++++.... +...-.|  ...+.+..  .++|++|.+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcc-cCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            4679999975 9999999999999997 57778887663 34455543322 2111111  22223322  357999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      +|.
T Consensus       106 ~G~  108 (174)
T d1e3ia2         106 AGT  108 (174)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            974

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.78  E-value=0.019  Score=46.84  Aligned_cols=30  Identities=17%  Similarity=0.263  Sum_probs=27.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKAL  191 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~  191 (437)
                      |+|.|.|++|.+|+.|++.+.++|+++++.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999999999987754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.73  E-value=0.026  Score=47.92  Aligned_cols=73  Identities=14%  Similarity=0.144  Sum_probs=46.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEE-EEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHH---HHh-cccEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVK-ALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKA---AVE-NCNKIIYC  233 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~-~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~---a~~-~~D~VIh~  233 (437)
                      .+.+|+|.|+ |+||...+..+...|++++ +.+++++. +..++++.. .+  .|..+.+..++   +.. ++|++|.+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~-~~--i~~~~~~~~~~i~~~t~gg~D~vid~  103 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT-HV--INSKTQDPVAAIKEITDGGVNFALES  103 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCe-EE--EeCCCcCHHHHHHHHcCCCCcEEEEc
Confidence            3678999987 9999999988888898655 45555442 333444322 23  34555433333   222 37999999


Q ss_pred             ccC
Q 013761          234 ATA  236 (437)
Q Consensus       234 Ag~  236 (437)
                      .|.
T Consensus       104 ~G~  106 (174)
T d1f8fa2         104 TGS  106 (174)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            874

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.71  E-value=0.024  Score=47.61  Aligned_cols=63  Identities=27%  Similarity=0.355  Sum_probs=44.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|-|.|- |-+|+.+++.|++.|++|++.+|+++. +.+...  ....    .   ++..++++.+|+||-+.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~--~~~~----~---~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA--GAET----A---STAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TCEE----C---SSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHh--hhhh----c---ccHHHHHhCCCeEEEEc
Confidence            46777755 999999999999999999999998763 122222  1211    1   23456778889988875

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=94.61  E-value=0.014  Score=49.60  Aligned_cols=36  Identities=22%  Similarity=0.470  Sum_probs=31.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~  196 (437)
                      .+++|+|.|+ ||.+++++..|.+.|. +|.++.|+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~   52 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVK   52 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHH
Confidence            4678999987 9999999999999996 7999999866

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=94.55  E-value=0.031  Score=46.69  Aligned_cols=90  Identities=13%  Similarity=0.123  Sum_probs=51.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC----CeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG----YSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G----~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      |+|.|.||||.+|+.|++.|+++.    .++..+..+.............. ...+..|.    ..++++|+||.++...
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~-~~~~~~~~----~~~~~~DvvF~alp~~   75 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAG-MLHDAFDI----ESLKQLDAVITCQGGS   75 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCC-BCEETTCH----HHHTTCSEEEECSCHH
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcce-eeecccch----hhhccccEEEEecCch
Confidence            579999999999999999988753    45655544332100001111111 11233343    3467889999987421


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcCCceeee
Q 013761          238 STITGDLFRVDYQGVYNVTKAFQDFNNKLAQL  269 (437)
Q Consensus       238 ~~~~~~~~~vNv~gt~~l~~aa~~~gvkl~~l  269 (437)
                                   -+..+...+.+.|.+...+
T Consensus        76 -------------~s~~~~~~l~~~g~~~~VI   94 (147)
T d1mb4a1          76 -------------YTEKVYPALRQAGWKGYWI   94 (147)
T ss_dssp             -------------HHHHHHHHHHHTTCCSEEE
T ss_pred             -------------HHHHHhHHHHHcCCceEEE
Confidence                         1234566666777663333

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.51  E-value=0.023  Score=47.78  Aligned_cols=64  Identities=11%  Similarity=0.171  Sum_probs=43.2

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |++|.|. |.|-+|++++++|++.||+|.+.+|+.+. +.+....  ..       ......+++..+|+++-+.
T Consensus         1 M~kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~--~~-------~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG--AS-------AARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT--CE-------ECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhh--cc-------ccchhhhhccccCeeeecc
Confidence            3578888 45999999999999999999999998653 1112111  10       0123445666777777665

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.27  E-value=0.045  Score=47.51  Aligned_cols=73  Identities=16%  Similarity=0.055  Sum_probs=47.7

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCH---HHHHHHHh--cccEEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDP---CTLKAAVE--NCNKIIY  232 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~---~~v~~a~~--~~D~VIh  232 (437)
                      .+.+|+|.|+ |.||...+..+...|+ +|++++++++. +..+.++..  .+ .|-.+.   +.+.++..  ++|++|.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~--~~-~~~~~~~~~~~i~~~t~g~g~D~vid  100 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE--IA-DLSLDTPLHEQIAALLGEPEVDCAVD  100 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE--EE-ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhcccc--EE-EeCCCcCHHHHHHHHhCCCCcEEEEE
Confidence            4679999986 9999888888777886 78888887653 334444432  22 233332   23444433  4699999


Q ss_pred             eccC
Q 013761          233 CATA  236 (437)
Q Consensus       233 ~Ag~  236 (437)
                      +.|.
T Consensus       101 ~vG~  104 (195)
T d1kola2         101 AVGF  104 (195)
T ss_dssp             CCCT
T ss_pred             Cccc
Confidence            9984

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.021  Score=49.67  Aligned_cols=37  Identities=19%  Similarity=0.211  Sum_probs=33.9

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      |+-++|.|.|| |-+|+.++..++..|++|++.|++++
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            45689999998 99999999999999999999999875

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.21  E-value=0.033  Score=48.20  Aligned_cols=70  Identities=20%  Similarity=0.168  Sum_probs=49.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      ++.++++.|.|. |.||+++++.|...|.+|...++.... ......         .+....+++++++.+|+|+.+.-.
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~---------~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL---------NLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH---------TCEECSSHHHHGGGCSEEEECSCC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccc---------cccccCCHHHHHHhccchhhcccc
Confidence            378899999975 999999999999999999999986542 111111         111224466788888988777654


Q ss_pred             C
Q 013761          237 R  237 (437)
Q Consensus       237 ~  237 (437)
                      +
T Consensus       111 t  111 (188)
T d2naca1         111 H  111 (188)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.10  E-value=0.077  Score=44.95  Aligned_cols=73  Identities=15%  Similarity=0.128  Sum_probs=48.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC----HHHHHHHHh--cccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD----PCTLKAAVE--NCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd----~~~v~~a~~--~~D~VI  231 (437)
                      .+.+|+|.|+ |++|...+..+...|+ +|++++++++. +..++++....+   |..+    .+.+.+...  ++|++|
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i---~~~~~d~~~~~~~~~~~~~G~d~vi  102 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL---NPKDYDKPIYEVICEKTNGGVDYAV  102 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEE---CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEE---cCCCchhHHHHHHHHhcCCCCcEEE
Confidence            4679999986 9999999999998996 78888887763 344555433222   3222    122333332  479999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      -++|.
T Consensus       103 d~~g~  107 (174)
T d1p0fa2         103 ECAGR  107 (174)
T ss_dssp             ECSCC
T ss_pred             EcCCC
Confidence            98874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.10  E-value=0.036  Score=48.21  Aligned_cols=71  Identities=10%  Similarity=0.024  Sum_probs=50.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATAR  237 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~  237 (437)
                      .+.++++.|.|. |.||+.+++.|...|.+|...++..........        ......++++++++.+|+|+.++..+
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~v~l~~plt  114 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------YQATFHDSLDSLLSVSQFFSLNAPST  114 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHHHHCSEEEECCCCC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhc--------ccccccCCHHHHHhhCCeEEecCCCC
Confidence            478999999966 999999999999999999999886542111100        01111245778888899887776543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.09  E-value=0.069  Score=44.73  Aligned_cols=73  Identities=12%  Similarity=0.170  Sum_probs=45.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHH-----hcccEEE
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAV-----ENCNKII  231 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~-----~~~D~VI  231 (437)
                      .+.+|+|.|+ |++|...++.+...|+ .|++.+++++. +..++++.... +  |..+ .+.+.+.+     .++|++|
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~-i--~~~~~~~~~~~~~~~~~~~g~D~vi  103 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC-I--NPQDFSKPIQEVLIEMTDGGVDYSF  103 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEE-E--CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEE-E--eCCchhhHHHHHHHHHcCCCCcEee
Confidence            3679999987 6899999999888996 56666666553 34444543322 2  2211 12233332     2479999


Q ss_pred             EeccC
Q 013761          232 YCATA  236 (437)
Q Consensus       232 h~Ag~  236 (437)
                      .+.|.
T Consensus       104 d~~G~  108 (176)
T d2fzwa2         104 ECIGN  108 (176)
T ss_dssp             ECSCC
T ss_pred             ecCCC
Confidence            99873

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.04  E-value=0.034  Score=46.59  Aligned_cols=35  Identities=20%  Similarity=0.346  Sum_probs=30.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY--SVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~--~V~~~~R~~~  196 (437)
                      ||+|+|.|. |.||..+++.|.+.|+  +|++.|++.+
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~   37 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPE   37 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence            467999975 9999999999999995  7888888765

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.03  E-value=0.038  Score=47.48  Aligned_cols=72  Identities=18%  Similarity=0.245  Sum_probs=42.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCC-cHHHHhh-CCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKA-DQEVVDM-LPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~-~~~~~~~-~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      |++|.|.||||.+|+.|++.|.++- .++..+..+. ....... .+....-......+.+   .+.+++|+||.+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEccc
Confidence            4689999999999999999998854 5665554332 2211111 1111111112223433   44567899998764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.03  E-value=0.022  Score=47.19  Aligned_cols=35  Identities=20%  Similarity=0.425  Sum_probs=32.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK  194 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~  194 (437)
                      +.+|+|||.|| |.+|..-++.|++.|++|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            78999999999 889999999999999999999754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.86  E-value=0.027  Score=49.30  Aligned_cols=66  Identities=18%  Similarity=0.139  Sum_probs=48.6

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATA  236 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~  236 (437)
                      .+.+|+|.|.|. |.||+.+++.|..-|.+|++.++.....    ....+.        ..+++++++.+|+|+.+.-.
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~----~~~~~~--------~~~l~~l~~~~D~v~~~~pl  107 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKG----DHPDFD--------YVSLEDLFKQSDVIDLHVPG  107 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSS----CCTTCE--------ECCHHHHHHHCSEEEECCCC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccchh----hhcchh--------HHHHHHHHHhcccceeeecc
Confidence            377899999965 9999999999999999999999865421    011111        12466788888988877644

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.83  E-value=0.025  Score=46.87  Aligned_cols=63  Identities=17%  Similarity=0.249  Sum_probs=43.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHH-hhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVV-DMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~-~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|.|.| .|.+|+.+++.|++.|++|++.++..+.... ......+    .+     +..++++.+|+||-+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----~~-----~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGV----TE-----TSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTC----EE-----CCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccc----cc-----cHHHHHhhcCeEEEEe
Confidence            4677775 5999999999999999999998887653211 1111111    11     2346788899999875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.82  E-value=0.068  Score=44.96  Aligned_cols=74  Identities=18%  Similarity=0.197  Sum_probs=45.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh--cccEEEEeccC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE--NCNKIIYCATA  236 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~--~~D~VIh~Ag~  236 (437)
                      +.+|+|.|+ |++|...+..+...|+ .|++++++++. +..+.+... .++..+=.+.+.+.+...  ++|++|.++|.
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~-~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGAD-HVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCS-EEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccc-eeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            568999986 9999999988877885 66667776552 334444332 233222111222333322  36999999874

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.79  E-value=0.04  Score=45.84  Aligned_cols=63  Identities=8%  Similarity=0.174  Sum_probs=44.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      |+|.+. |+|-+|+++++.|++.|++|++.+|+.+.  +..+..+..  +       ..+.+++++.+|+||-+.
T Consensus         1 MkIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~--~-------~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALP--Y-------AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCC--B-------CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccccee--e-------echhhhhhhccceeeeec
Confidence            467777 55999999999999999999999998652  122222211  1       123566788899999764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.42  E-value=0.061  Score=42.99  Aligned_cols=35  Identities=20%  Similarity=0.287  Sum_probs=31.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      .++++|.|| |++|-++|..|.+.|.+|+++.+...
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            478989877 99999999999999999999998754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.38  E-value=0.076  Score=44.97  Aligned_cols=71  Identities=14%  Similarity=0.154  Sum_probs=48.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEec
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ..|-|.|- |-+|..++++|++.|++|++.+|+.+. +.+.......... .-....+++.+++..+|.+|-+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~-~~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKV-LGAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSC-EECSSHHHHHHHBCSSCEEEECS
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccc-cchhhhhhhhhhhcccceEEEec
Confidence            46778866 999999999999999999999998863 1121111110000 12345677777788888888775

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.25  E-value=0.067  Score=42.71  Aligned_cols=35  Identities=20%  Similarity=0.242  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      ..++|+|.|| |++|..+|..|.+.|.+|+++.+..
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3578888866 9999999999999999999998864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.24  E-value=0.055  Score=46.71  Aligned_cols=67  Identities=12%  Similarity=0.040  Sum_probs=49.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +.++++.|. |.|.||+.+++.|...|.+|+..++.....    .. ..    ..+   ++++++++.+|+|+.++..+.
T Consensus        42 l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~----~~-~~----~~~---~~l~ell~~sDii~i~~plt~  108 (188)
T d1sc6a1          42 ARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLP----LG-NA----TQV---QHLSDLLNMSDVVSLHVPENP  108 (188)
T ss_dssp             STTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CT-TC----EEC---SCHHHHHHHCSEEEECCCSST
T ss_pred             ccceEEEEe-ecccchhhhhhhcccccceEeeccccccch----hh-hh----hhh---hhHHHHHhhccceeecccCCc
Confidence            778999999 559999999999999999999999864321    00 11    111   356788888999988876543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.14  E-value=0.067  Score=42.12  Aligned_cols=34  Identities=21%  Similarity=0.238  Sum_probs=30.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |+||..+|..|.+.|.+|+++.|...
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            68999987 99999999999999999999998653

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.94  E-value=0.0025  Score=54.89  Aligned_cols=36  Identities=17%  Similarity=0.284  Sum_probs=31.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      +.+|+|+|.|+ ||.+++++..|.+.| +|.++.|+.+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~   51 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVE   51 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhh
Confidence            68899999977 889999999998777 8999999865

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.06  Score=52.60  Aligned_cols=72  Identities=18%  Similarity=0.261  Sum_probs=49.4

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH--------------------H----HHhhCC--CCeEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ--------------------E----VVDMLP--RSVEIVLG  212 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~--------------------~----~~~~~~--~~v~~v~~  212 (437)
                      .+.+|||.|+ ||||.++++.|+..|. ++.++|.+.-+                    +    .+..+.  -.+..+..
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence            4568999988 7799999999999996 78988875310                    0    011111  24555656


Q ss_pred             cCCCHHHHHHHHhcccEEEEec
Q 013761          213 DVGDPCTLKAAVENCNKIIYCA  234 (437)
Q Consensus       213 Dltd~~~v~~a~~~~D~VIh~A  234 (437)
                      ++.+..  ..+++++|+||.+.
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEECC
T ss_pred             cccchH--HHHHHhcchheecc
Confidence            665433  46788899999875

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.77  E-value=0.083  Score=45.88  Aligned_cols=34  Identities=35%  Similarity=0.484  Sum_probs=30.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      .|+|+|.|| |..|..+|.+|+++|++|++++|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999987 9999999999999999999999864

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.45  E-value=0.16  Score=42.82  Aligned_cols=70  Identities=16%  Similarity=0.198  Sum_probs=52.6

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      +.||+++|.| -|.+|+-+|++|...|++|++...++-.. ++..-+..++.        .++++++..|++|-+-|-..
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a-lqA~mdGf~v~--------~~~~a~~~aDi~vTaTGn~~   90 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA-IQAVMEGFNVV--------TLDEIVDKGDFFITCTGNVD   90 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH-HHHHTTTCEEC--------CHHHHTTTCSEEEECCSSSS
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh-HHHHhcCCccC--------chhHccccCcEEEEcCCCCc
Confidence            7899999995 69999999999999999999998876532 22222333332        24578888899998877544

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.39  E-value=0.086  Score=42.13  Aligned_cols=33  Identities=21%  Similarity=0.253  Sum_probs=30.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      |+++|.|| |+||.+++..|.+.|.+|+++.|..
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            68999987 8999999999999999999999975

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.32  E-value=0.09  Score=41.90  Aligned_cols=34  Identities=15%  Similarity=0.145  Sum_probs=30.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |.||.++|..|.+.|.+|+++.+.+.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            68999977 99999999999999999999998653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.28  E-value=0.079  Score=42.12  Aligned_cols=34  Identities=29%  Similarity=0.413  Sum_probs=30.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |++|-++|..|.+.|.+|+++.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            68888877 99999999999999999999988653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.22  E-value=0.096  Score=41.26  Aligned_cols=34  Identities=24%  Similarity=0.092  Sum_probs=30.5

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |++|.++|..|.+.|.+|+++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            68888876 99999999999999999999998653

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.19  E-value=0.4  Score=36.09  Aligned_cols=69  Identities=16%  Similarity=0.161  Sum_probs=45.3

Q ss_pred             CEEEEECCCChHH-HHHHHHHHHCCCeEEEEecCCcHH--HHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          162 TTVLVVGATSRIG-RIVIRKLMLRGYSVKALVRKADQE--VVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       162 k~vLVTGAtG~IG-~~la~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      |+|.+.|-. |+| ++||+.|+++|++|...|+...+.  .++..  ++.+..+.  +++.    +.+.|.||...++..
T Consensus         2 ~~ihfiGIg-G~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~--Gi~i~~gh--~~~~----i~~~d~vV~SsAI~~   72 (89)
T d1j6ua1           2 MKIHFVGIG-GIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKL--GIPIFVPH--SADN----WYDPDLVIKTPAVRD   72 (89)
T ss_dssp             CEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT--TCCEESSC--CTTS----CCCCSEEEECTTCCT
T ss_pred             cEEEEEeEC-HHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHC--CCeEEeee--cccc----cCCCCEEEEecCcCC
Confidence            577777764 445 478999999999999999986542  23333  34443321  2221    256799999988864


Q ss_pred             C
Q 013761          239 T  239 (437)
Q Consensus       239 ~  239 (437)
                      .
T Consensus        73 ~   73 (89)
T d1j6ua1          73 D   73 (89)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.16  E-value=0.087  Score=41.74  Aligned_cols=33  Identities=18%  Similarity=0.212  Sum_probs=30.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      ++++|.|| |+||-++|..|...|.+|+++.|..
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            68999977 9999999999999999999999864

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=91.98  E-value=0.27  Score=40.30  Aligned_cols=34  Identities=24%  Similarity=0.391  Sum_probs=29.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRG-YSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~R~~~  196 (437)
                      |+|.+.|+ |-+|.++++.|++.| ++|++.+|+.+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChh
Confidence            46788866 999999999999887 99999999876

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=91.74  E-value=0.27  Score=42.14  Aligned_cols=76  Identities=21%  Similarity=0.127  Sum_probs=53.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEec----------------------CCCHH
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGD----------------------VGDPC  218 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~D----------------------ltd~~  218 (437)
                      -+|+|.|| |-.|.+-++.....|+.|.++|.+.+. +.++.+..  .++..+                      ....+
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~--~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG--KFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC--EECCC-----------------------CCHHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc--ceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            48999987 899999999999999999999998762 33333321  111111                      12345


Q ss_pred             HHHHHHhcccEEEEeccCCCCc
Q 013761          219 TLKAAVENCNKIIYCATARSTI  240 (437)
Q Consensus       219 ~v~~a~~~~D~VIh~Ag~~~~~  240 (437)
                      .+.+.+..+|+||-.|-+.+..
T Consensus       107 ~l~~~l~~aDlVI~talipG~~  128 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKP  128 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSC
T ss_pred             HHHHHHHhhhhheeeeecCCcc
Confidence            6677788899999998776543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.68  E-value=0.091  Score=45.87  Aligned_cols=34  Identities=26%  Similarity=0.359  Sum_probs=30.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      +|+|+|.|| |.-|...|.+|++.|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            478999977 8999999999999999999998764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=91.63  E-value=0.05  Score=46.87  Aligned_cols=34  Identities=15%  Similarity=0.137  Sum_probs=31.7

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++|.|.|| |-+|+.++..++..|++|++.|++++
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            67999988 99999999999999999999999865

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.62  E-value=0.13  Score=40.60  Aligned_cols=34  Identities=24%  Similarity=0.140  Sum_probs=31.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |+||-.+|..|.+.|.+|+++.+...
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            68999977 99999999999999999999998753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.44  E-value=0.1  Score=40.94  Aligned_cols=34  Identities=21%  Similarity=0.197  Sum_probs=30.3

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |++|-++|..|.+.|.+|+++.+.+.
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            68888876 99999999999999999999988643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=91.41  E-value=0.14  Score=44.78  Aligned_cols=67  Identities=18%  Similarity=0.195  Sum_probs=46.9

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhCCCCeEEEEecCCCHHHHHHHHh-cccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDMLPRSVEIVLGDVGDPCTLKAAVE-NCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd~~~v~~a~~-~~D~VIh~Ag  235 (437)
                      ++.+++|+|-| -|.+|+++++.|.+.|++|++.+.+... ......  ....+     +.+   +++. .||+++=||.
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~--g~~~~-----~~~---~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVAL--GHTAV-----ALE---DVLSTPCDVFAPCAM   92 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TCEEC-----CGG---GGGGCCCSEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh--ccccc-----Ccc---ccccccceeeecccc
Confidence            48899999997 6999999999999999999998876542 111122  22222     222   2343 6899998874

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.38  E-value=0.14  Score=41.36  Aligned_cols=35  Identities=23%  Similarity=0.283  Sum_probs=31.3

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      .++++|.|| |++|.+++..|.+.|.+|.++.+...
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            578999976 99999999999999999999998653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.31  E-value=0.11  Score=41.44  Aligned_cols=32  Identities=34%  Similarity=0.324  Sum_probs=29.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK  194 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~  194 (437)
                      ++++|.|| |.||.++|..|.+.|.+|+++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            57888877 999999999999999999999875

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.10  E-value=0.099  Score=44.50  Aligned_cols=31  Identities=23%  Similarity=0.315  Sum_probs=26.5

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCeEEEE
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR-GYSVKAL  191 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~~  191 (437)
                      |++|.|.||||++|++|++.|..+ ..+|..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            468999999999999999999987 5676544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.92  E-value=0.21  Score=39.07  Aligned_cols=36  Identities=28%  Similarity=0.228  Sum_probs=31.9

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      .+++++|.|| |.||..++..|...|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4689999977 99999999999999999999998653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=90.72  E-value=0.4  Score=39.80  Aligned_cols=76  Identities=13%  Similarity=0.158  Sum_probs=47.1

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH-HHHhhCCCCeEEEEecCCC-HHHHHHHHh--cccEEEEec
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ-EVVDMLPRSVEIVLGDVGD-PCTLKAAVE--NCNKIIYCA  234 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~-~~~~~~~~~v~~v~~Dltd-~~~v~~a~~--~~D~VIh~A  234 (437)
                      .+.+|+|.|+ |++|...+..+...|. +|++++++++. +..++++....+-.-+-.+ .+.+.+...  ++|++|-+.
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~  106 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV  106 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeec
Confidence            4678999986 6678777777887775 68888887763 4455555333221112211 233334332  479999998


Q ss_pred             cC
Q 013761          235 TA  236 (437)
Q Consensus       235 g~  236 (437)
                      |.
T Consensus       107 G~  108 (175)
T d1cdoa2         107 GN  108 (175)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.65  E-value=0.12  Score=43.27  Aligned_cols=35  Identities=14%  Similarity=0.234  Sum_probs=31.0

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~  196 (437)
                      +|+|+|.|| |..|...|..|++.|+ +|+++.|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999987 9999999999999998 5999998754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.65  E-value=0.18  Score=43.07  Aligned_cols=37  Identities=24%  Similarity=0.290  Sum_probs=33.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ...|+|+|.|| |..|...|..|+++|++|+++.+...
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            46789999987 99999999999999999999998754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.46  E-value=0.37  Score=39.16  Aligned_cols=29  Identities=24%  Similarity=0.420  Sum_probs=23.9

Q ss_pred             EEEEECCCChHHHHHHHHHHH-CCCeEEEE
Q 013761          163 TVLVVGATSRIGRIVIRKLML-RGYSVKAL  191 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~-~G~~V~~~  191 (437)
                      +|.|.|++|.+|+.+++.+.+ .++++...
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            689999999999999998776 45776543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.40  E-value=0.47  Score=43.63  Aligned_cols=36  Identities=25%  Similarity=0.231  Sum_probs=31.8

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK  194 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~  194 (437)
                      ++.+++|+|-|- |-+|+++++.|.+.|++|+.++-.
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            478999999976 999999999999999999887643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.40  E-value=0.17  Score=44.28  Aligned_cols=36  Identities=25%  Similarity=0.237  Sum_probs=31.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ..++|+|.|| |..|..+|..|+++|++|+++.|+.+
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3468999987 99999999999999999999998653

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.21  E-value=0.12  Score=38.23  Aligned_cols=36  Identities=22%  Similarity=0.264  Sum_probs=31.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ  197 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~  197 (437)
                      +|+|.|.|+ |.+|+-++..-...|++|++++-+.+.
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            478999977 999999999999999999999987653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.05  E-value=0.16  Score=41.49  Aligned_cols=35  Identities=20%  Similarity=0.271  Sum_probs=30.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKA  195 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~  195 (437)
                      +||+|+|.|| |.+|..++..|.+.|  .+|+++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999987 999999999999987  4788888765

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.95  E-value=0.14  Score=40.77  Aligned_cols=34  Identities=21%  Similarity=0.184  Sum_probs=31.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |.||..+|..|.+.|.+|+++.|.+.
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            68999977 99999999999999999999998754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.85  E-value=0.12  Score=44.70  Aligned_cols=75  Identities=15%  Similarity=0.233  Sum_probs=46.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH-HHHhhC-----CCCeE------EEEecCCCHHHHHHHHhcccE
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ-EVVDML-----PRSVE------IVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~-~~~~~~-----~~~v~------~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      |+|.|. |.|++|..++..|++.|++|+++|.+.+. +.+..-     .....      .....+.-..+..++++.+|+
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            468888 56999999999999999999999987542 111110     00000      000000111235567788899


Q ss_pred             EEEeccCC
Q 013761          230 IIYCATAR  237 (437)
Q Consensus       230 VIh~Ag~~  237 (437)
                      +|.|.+..
T Consensus        80 i~i~VpTP   87 (202)
T d1mv8a2          80 SFICVGTP   87 (202)
T ss_dssp             EEECCCCC
T ss_pred             EEEecCcc
Confidence            99998753

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=89.83  E-value=0.046  Score=45.64  Aligned_cols=25  Identities=40%  Similarity=0.440  Sum_probs=22.2

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCC
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGY  186 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~  186 (437)
                      =+|.|.||||.+|.+|++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            3799999999999999998888764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.76  E-value=0.14  Score=45.31  Aligned_cols=31  Identities=16%  Similarity=0.218  Sum_probs=28.6

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      |+|.|| |-+|..+|.+|+++|++|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            888877 9999999999999999999999864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.71  E-value=0.19  Score=46.51  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=31.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      +|+|+|.|| |.-|..+|..|++.|++|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            589999977 99999999999999999999998764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.23  E-value=0.2  Score=40.04  Aligned_cols=34  Identities=15%  Similarity=0.155  Sum_probs=30.8

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++++|.|| |.||.++|..|...|.+|+++.+...
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            68999987 99999999999999999999988653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=89.21  E-value=1.8  Score=36.00  Aligned_cols=71  Identities=13%  Similarity=0.159  Sum_probs=45.1

Q ss_pred             CEEEEECCCChHHHH--HHHHHHHC----CCeEEEEecCCcHH---------HHhhCCCCeEEEEecCCCHHHHHHHHhc
Q 013761          162 TTVLVVGATSRIGRI--VIRKLMLR----GYSVKALVRKADQE---------VVDMLPRSVEIVLGDVGDPCTLKAAVEN  226 (437)
Q Consensus       162 k~vLVTGAtG~IG~~--la~~Ll~~----G~~V~~~~R~~~~~---------~~~~~~~~v~~v~~Dltd~~~v~~a~~~  226 (437)
                      ++|.|.|| |.+|..  ++..|+..    +.+++++|++++..         ..........+...     .+.++++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~eaL~d   76 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVIID   76 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHHTT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChhhcccC
Confidence            58999997 777764  34445432    46999999986521         11223334443322     235678899


Q ss_pred             ccEEEEeccCCC
Q 013761          227 CNKIIYCATARS  238 (437)
Q Consensus       227 ~D~VIh~Ag~~~  238 (437)
                      +|+||+.++...
T Consensus        77 ad~Vv~~~~~g~   88 (171)
T d1obba1          77 ADFVINTAMVGG   88 (171)
T ss_dssp             CSEEEECCCTTH
T ss_pred             CCeEeeeccccc
Confidence            999999998754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=88.36  E-value=0.53  Score=41.50  Aligned_cols=95  Identities=15%  Similarity=0.175  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCcH------------------------HHHhhCCCCeEEEEec
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKADQ------------------------EVVDMLPRSVEIVLGD  213 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~~~------------------------~~~~~~~~~v~~v~~D  213 (437)
                      +.+++|+|.|+ |++|.+++..|+..|. +++++|.+.-+                        +.+..+...+.+...+
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            34579999985 8899999999999996 78888754210                        0111222344444333


Q ss_pred             C-CCHHHHHHHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCce
Q 013761          214 V-GDPCTLKAAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNKL  266 (437)
Q Consensus       214 l-td~~~v~~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvkl  266 (437)
                      . -+.+.....+...|++|.+..    .        ...-..+-+++.+.++.+
T Consensus       107 ~~~~~~~~~~~~~~~divid~~d----~--------~~~~~~in~~~~~~~ip~  148 (247)
T d1jw9b_         107 ALLDDAELAALIAEHDLVLDCTD----N--------VAVRNQLNAGCFAAKVPL  148 (247)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS----S--------HHHHHHHHHHHHHHTCCE
T ss_pred             hhhhhccccccccccceeeeccc----h--------hhhhhhHHHHHHHhCCCc
Confidence            3 244556677778899887642    1        112234556676666553

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.16  E-value=1.6  Score=34.76  Aligned_cols=37  Identities=22%  Similarity=0.236  Sum_probs=30.4

Q ss_pred             CCCCEEEEECCC---ChHHHHHHHHHHHCC-CeEEEEecCC
Q 013761          159 AQNTTVLVVGAT---SRIGRIVIRKLMLRG-YSVKALVRKA  195 (437)
Q Consensus       159 l~~k~vLVTGAt---G~IG~~la~~Ll~~G-~~V~~~~R~~  195 (437)
                      |.-++|.|.|||   +.+|..+.+.|.+.| ++|+.+-.+.
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~   46 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE   46 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc
Confidence            456899999999   899999999988766 6888876543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.12  E-value=0.16  Score=42.64  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=29.6

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      |+|-|. |.|-+|..++++|++.|++|.+.+|+.+
T Consensus         2 MkIGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~   35 (178)
T d1pgja2           2 MDVGVV-GLGVMGANLALNIAEKGFKVAVFNRTYS   35 (178)
T ss_dssp             BSEEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CEEEEE-eehHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            356666 5699999999999999999999999876

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.06  E-value=0.2  Score=43.53  Aligned_cols=34  Identities=32%  Similarity=0.305  Sum_probs=30.0

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      |+|+|.|| |.-|...|.+|.++|++|+++.++..
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            46899988 99999999999999999999987643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.50  E-value=0.51  Score=38.38  Aligned_cols=36  Identities=17%  Similarity=0.140  Sum_probs=29.5

Q ss_pred             CCEEEEE-CCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          161 NTTVLVV-GATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVT-GAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ++.++|. .+.|+||.+++..|++.|.+|+++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4555555 46699999999999999999999998643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.49  E-value=0.49  Score=41.15  Aligned_cols=37  Identities=32%  Similarity=0.442  Sum_probs=33.0

Q ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          159 AQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       159 l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      -..++|+|.|| |..|...|..|+++|++|+++.+...
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            46789999987 99999999999999999999988654

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=87.32  E-value=2.3  Score=36.33  Aligned_cols=95  Identities=14%  Similarity=0.235  Sum_probs=62.2

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcHHHHhhCCCCeEEEEec-C------------------CCHHHHHH
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQEVVDMLPRSVEIVLGD-V------------------GDPCTLKA  222 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~~~~~~~~~~v~~v~~D-l------------------td~~~v~~  222 (437)
                      +|.|.|- |+-|..++.+|.+.|.+ |-.+.-+.+.+.+........+..+. +                  .+.+.+.+
T Consensus         2 kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~~   80 (194)
T d1w5fa1           2 KIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIRE   80 (194)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHHH
Confidence            5667755 78899999999987742 54444445544555544444443332 1                  13556777


Q ss_pred             HHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          223 AVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       223 a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      .++++|.||-+||..+..-       --++-.+.+.+++.++-
T Consensus        81 ~l~~~d~vfi~AGlGGgTG-------tgaapviA~~ake~g~l  116 (194)
T d1w5fa1          81 VLQDTHMVFITAGFGGGTG-------TGASPVIAKIAKEMGIL  116 (194)
T ss_dssp             HTTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHTTCE
T ss_pred             HhcCCCeEEEEEecCCCcc-------cchHHHHHHHHHHcCCc
Confidence            8888899999999876532       23445688888888764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.25  E-value=0.027  Score=47.74  Aligned_cols=94  Identities=19%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCeEEE-EecCCcHHHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEeccCCC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR-GYSVKA-LVRKADQEVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCATARS  238 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~-G~~V~~-~~R~~~~~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag~~~  238 (437)
                      ..+|.|.|++|.+|++|++.+.+. +.+++. ++|......-.....-......++.-.++++.+++.+|+||-..    
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs----   79 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT----   79 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEec----
Confidence            458999999999999999998875 667654 44543221100000000000001111122334566778887642    


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHhcCCcee
Q 013761          239 TITGDLFRVDYQGVYNVTKAFQDFNNKLA  267 (437)
Q Consensus       239 ~~~~~~~~vNv~gt~~l~~aa~~~gvkl~  267 (437)
                       .+        .++...++.|.++++.+.
T Consensus        80 -~p--------~~~~~~~~~a~~~~~~~V   99 (162)
T d1diha1          80 -RP--------EGTLNHLAFCRQHGKGMV   99 (162)
T ss_dssp             -CH--------HHHHHHHHHHHHTTCEEE
T ss_pred             -cH--------HHHHHHHHHHHhccceeE
Confidence             11        344567778878776643

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.04  E-value=2.1  Score=36.99  Aligned_cols=96  Identities=16%  Similarity=0.221  Sum_probs=62.9

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCe-EEEEecCCcHHHHhhCCCCeEEEEecC-------------------CCHHHHH
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYS-VKALVRKADQEVVDMLPRSVEIVLGDV-------------------GDPCTLK  221 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~-V~~~~R~~~~~~~~~~~~~v~~v~~Dl-------------------td~~~v~  221 (437)
                      .+|.|.|- |+-|..++.+|.+.|.+ |-.+.-+.+.+.+........+..+.-                   .+.+.+.
T Consensus        16 ~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~I~   94 (209)
T d2vapa1          16 AKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIK   94 (209)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHHHH
T ss_pred             CcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHHHHHHHHH
Confidence            36777765 78899999999998743 555544555444444443333333221                   1345778


Q ss_pred             HHHhcccEEEEeccCCCCchhhHHHHHHHHHHHHHHHHHhcCCc
Q 013761          222 AAVENCNKIIYCATARSTITGDLFRVDYQGVYNVTKAFQDFNNK  265 (437)
Q Consensus       222 ~a~~~~D~VIh~Ag~~~~~~~~~~~vNv~gt~~l~~aa~~~gvk  265 (437)
                      ++++++|.||-+||..+..-       --++-.+.+.+++.++-
T Consensus        95 ~~l~~~d~vfi~AGlGGGTG-------sgaapvia~~ake~g~l  131 (209)
T d2vapa1          95 AAIQDSDMVFITCGLGGGTG-------TGSAPVVAEISKKIGAL  131 (209)
T ss_dssp             HHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHTTCE
T ss_pred             HhccCCCEEEEEEeCCCCcc-------ccHHHHHHHHHHHcCCc
Confidence            88889999999999876532       22444588888888764

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.82  E-value=0.31  Score=40.85  Aligned_cols=32  Identities=22%  Similarity=0.286  Sum_probs=28.4

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      |+|.|| |.-|...|..|+++|++|.++.++..
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            788874 99999999999999999999998753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=86.03  E-value=0.39  Score=42.55  Aligned_cols=35  Identities=26%  Similarity=0.237  Sum_probs=31.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      ..|+|+|.|| |-.|...|..|+++|++|+++.+..
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3478999977 8999999999999999999998764

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.80  E-value=0.68  Score=42.40  Aligned_cols=33  Identities=24%  Similarity=0.263  Sum_probs=27.6

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      +.+=--.||..|.+||+.|+.+|++|+++.+..
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            455555789999999999999999999997653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.57  E-value=0.54  Score=41.04  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=30.0

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      +.++|+|.|| |.-|...|.+|.+.|++|+++-.+.
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3457999977 9999999999999999999997653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.06  E-value=2.1  Score=35.55  Aligned_cols=72  Identities=13%  Similarity=0.040  Sum_probs=43.0

Q ss_pred             CEEEEECC-CChHHHHHHHHHHHC----CCeEEEEecCCcHH---HHh--------hCCCCeEEEEecCCCHHHHHHHHh
Q 013761          162 TTVLVVGA-TSRIGRIVIRKLMLR----GYSVKALVRKADQE---VVD--------MLPRSVEIVLGDVGDPCTLKAAVE  225 (437)
Q Consensus       162 k~vLVTGA-tG~IG~~la~~Ll~~----G~~V~~~~R~~~~~---~~~--------~~~~~v~~v~~Dltd~~~v~~a~~  225 (437)
                      ++|.|.|| +.+.+..++..++..    +-+++++|.+++..   ...        .......+  ...+|   ..++++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~td---~~~al~   76 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLTLD---RRRALD   76 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEESC---HHHHHT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eecCC---chhhcC
Confidence            47888886 445666665555442    24899999876521   111        11222222  22233   356788


Q ss_pred             cccEEEEeccCCC
Q 013761          226 NCNKIIYCATARS  238 (437)
Q Consensus       226 ~~D~VIh~Ag~~~  238 (437)
                      ++|+||+.|+...
T Consensus        77 gaDvVv~ta~~~~   89 (169)
T d1s6ya1          77 GADFVTTQFRVGG   89 (169)
T ss_dssp             TCSEEEECCCTTH
T ss_pred             CCCEEEEccccCC
Confidence            9999999999764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.51  E-value=0.43  Score=42.24  Aligned_cols=31  Identities=26%  Similarity=0.258  Sum_probs=28.1

Q ss_pred             EEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Q 013761          164 VLVVGATSRIGRIVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       164 vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~  195 (437)
                      |+|.|| |.+|..+|.+|+++|++|+++++..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788876 9999999999999999999999854

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=84.21  E-value=1.7  Score=35.74  Aligned_cols=36  Identities=33%  Similarity=0.423  Sum_probs=29.8

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~  196 (437)
                      .|+|.|.|+||-||....+-+.+.  .++|+++.-...
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN   39 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC
Confidence            479999999999999999988764  588888766544

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.16  E-value=0.52  Score=38.72  Aligned_cols=33  Identities=24%  Similarity=0.262  Sum_probs=27.6

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRK  194 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~  194 (437)
                      +++|+|.|| |.+|-.++..|.+.|.+|.++.+.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence            578999877 999999999999999887665544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.35  E-value=0.36  Score=42.94  Aligned_cols=33  Identities=24%  Similarity=0.293  Sum_probs=30.1

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      .|+|.|| |-.|..++..|.+.|++|+++.+.++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6999988 79999999999999999999999764

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.28  E-value=0.43  Score=43.40  Aligned_cols=34  Identities=15%  Similarity=0.271  Sum_probs=30.1

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      ..|+|.|| |.-|..+|++|++.|++|.++.++..
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            46889977 99999999999999999999988754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=82.40  E-value=0.93  Score=40.06  Aligned_cols=69  Identities=16%  Similarity=0.198  Sum_probs=46.4

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCcH--HHHhhCCCCeEEEEecCCCHHHHHHHHhcccEEEEecc
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKADQ--EVVDMLPRSVEIVLGDVGDPCTLKAAVENCNKIIYCAT  235 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~v~~v~~Dltd~~~v~~a~~~~D~VIh~Ag  235 (437)
                      ++.+++|+|-|- |-+|+++++.|.+.|++|++.+.+...  .......  ...     .+.+++  +-..||+++=||.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g--~~~-----~~~~~~--~~~~cDIl~PcA~  105 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG--ADA-----VAPNAI--YGVTCDIFAPCAL  105 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--CEE-----CCGGGT--TTCCCSEEEECSC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC--Ccc-----cCCccc--ccccccEeccccc
Confidence            378999999965 999999999999999999998876542  1111111  111     122221  1235799999986


Q ss_pred             C
Q 013761          236 A  236 (437)
Q Consensus       236 ~  236 (437)
                      .
T Consensus       106 ~  106 (230)
T d1leha1         106 G  106 (230)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.23  E-value=0.57  Score=41.94  Aligned_cols=32  Identities=22%  Similarity=0.544  Sum_probs=28.0

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA  195 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~  195 (437)
                      .|+|.|| |-+|..+|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5888877 8999999999999996 699999863

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=82.07  E-value=0.82  Score=40.66  Aligned_cols=35  Identities=29%  Similarity=0.329  Sum_probs=31.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR  193 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R  193 (437)
                      ++.+++|+|-| -|-+|+++++.|.+.|++|+.++-
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            37899999996 699999999999999999987764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=82.03  E-value=0.71  Score=39.06  Aligned_cols=33  Identities=21%  Similarity=0.440  Sum_probs=26.6

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEe
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG-YSVKALV  192 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G-~~V~~~~  192 (437)
                      +..+|.|.||||..|+.|++.|..+- .++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            34589999999999999999998864 5665554

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.90  E-value=0.8  Score=41.82  Aligned_cols=36  Identities=17%  Similarity=0.316  Sum_probs=30.3

Q ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecCCc
Q 013761          160 QNTTVLVVGATSRIGRIVIRKLMLRG--YSVKALVRKAD  196 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~~la~~Ll~~G--~~V~~~~R~~~  196 (437)
                      .+|+|+|.|| |.-|..+|..|+++|  ++|+++.|+..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4579999977 888999999998877  59999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.86  E-value=0.54  Score=39.87  Aligned_cols=33  Identities=15%  Similarity=0.062  Sum_probs=27.4

Q ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecCCc
Q 013761          162 TTVLVVGATSRIGRIVIRKLMLRGYSVKALVRKAD  196 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R~~~  196 (437)
                      |+|.|.| .|++|..++..| ++|++|+++|-++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~   33 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS   33 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence            5788886 799999998755 57999999998764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.24  E-value=0.69  Score=41.58  Aligned_cols=35  Identities=20%  Similarity=0.144  Sum_probs=31.1

Q ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec
Q 013761          158 GAQNTTVLVVGATSRIGRIVIRKLMLRGYSVKALVR  193 (437)
Q Consensus       158 ~l~~k~vLVTGAtG~IG~~la~~Ll~~G~~V~~~~R  193 (437)
                      ++.+++|+|-| .|-+|+++++.|.+.|++|+.+.-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            37899999998 699999999999999999987754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=81.24  E-value=0.55  Score=38.88  Aligned_cols=36  Identities=22%  Similarity=0.323  Sum_probs=29.7

Q ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCc
Q 013761          161 NTTVLVVGATSRIGRIVIRKLMLR--GYSVKALVRKAD  196 (437)
Q Consensus       161 ~k~vLVTGAtG~IG~~la~~Ll~~--G~~V~~~~R~~~  196 (437)
                      ||+|.|.|+||.||.....-+.+.  .++|+++.-...
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN   38 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence            578999999999999999988775  578888765544

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.90  E-value=0.071  Score=44.85  Aligned_cols=71  Identities=15%  Similarity=0.136  Sum_probs=41.0

Q ss_pred             CEEEEECCCChHHHHHHHH-HHH-----CCCeEEEEecCCcHHH-Hhh-----CCCCeEEEEecCCCHHHHHHHHhcccE
Q 013761          162 TTVLVVGATSRIGRIVIRK-LML-----RGYSVKALVRKADQEV-VDM-----LPRSVEIVLGDVGDPCTLKAAVENCNK  229 (437)
Q Consensus       162 k~vLVTGAtG~IG~~la~~-Ll~-----~G~~V~~~~R~~~~~~-~~~-----~~~~v~~v~~Dltd~~~v~~a~~~~D~  229 (437)
                      |+|.|.||. .+|..++-. |+.     .+.+++++|.+++... ..+     ......+..   +  .+..++++++|+
T Consensus         1 mKIaiIGaG-s~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~---t--~~~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGGG-SSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI---S--DTFEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETTT-CTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE---C--SSHHHHHTTCSE
T ss_pred             CEEEEECCC-HHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE---e--cCcccccCCCCE
Confidence            478999984 355544432 222     1468999998765311 111     122223222   1  123578899999


Q ss_pred             EEEeccCCC
Q 013761          230 IIYCATARS  238 (437)
Q Consensus       230 VIh~Ag~~~  238 (437)
                      ||..||...
T Consensus        75 VVita~~~~   83 (162)
T d1up7a1          75 VIFQFRPGG   83 (162)
T ss_dssp             EEECCCTTH
T ss_pred             EEEecccCC
Confidence            999998753

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.52  E-value=0.55  Score=40.23  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=30.0

Q ss_pred             CCCEEEEECCCChHHH-----HHHHHHHHCCCeEEEEecCC
Q 013761          160 QNTTVLVVGATSRIGR-----IVIRKLMLRGYSVKALVRKA  195 (437)
Q Consensus       160 ~~k~vLVTGAtG~IG~-----~la~~Ll~~G~~V~~~~R~~  195 (437)
                      |+|.|.|+|+-||+|+     +|+..|+..|.+|.++|-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4678999999999987     56777778999999999653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=80.32  E-value=0.8  Score=38.16  Aligned_cols=32  Identities=28%  Similarity=0.331  Sum_probs=27.9

Q ss_pred             EEEEECCCChHHHHHHHHHHHCCC-eEEEEecCC
Q 013761          163 TVLVVGATSRIGRIVIRKLMLRGY-SVKALVRKA  195 (437)
Q Consensus       163 ~vLVTGAtG~IG~~la~~Ll~~G~-~V~~~~R~~  195 (437)
                      +|+|.|| |--|...|..|.++|+ +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            5888877 9999999999999996 699998864