BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013763
(437 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C5DDQ4|AIM32_LACTC Altered inheritance of mitochondria protein 32 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=AIM32 PE=3 SV=1
Length = 332
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 11/103 (10%)
Query: 188 VFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVIIF--- 244
V VC H RD RCG P L+ F+ ++E + ++ SHIGGHK+AGNVI +
Sbjct: 230 VLVCGHHQRDERCGQIAPRLIKEFEAKVEE-----DLDLAIVSHIGGHKFAGNVIFYKFL 284
Query: 245 GSNVNGEVT--GHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRG 285
G +G+ T W+G + P VPTLLE H+G+ EI+ +RG
Sbjct: 285 GFEADGKATVDSLWFGKILPSAVPTLLE-HLGRNEIITPWFRG 326
>sp|Q6BPT6|AIM32_DEBHA Altered inheritance of mitochondria protein 32 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=AIM32 PE=3 SV=2
Length = 273
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 188 VFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVIIFGSN 247
+ VC H RD RCG P LV +FK+ ++ GL V V SHIGGH YAGNVI F S+
Sbjct: 178 ILVCGHTQRDVRCGKIAPILVDQFKKSLKDRGL--DVDVGVVSHIGGHAYAGNVIYFPSD 235
Query: 248 VNGEVTGHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRGQM 287
+ WYG V P+ V ++++ + G I+ L+RG++
Sbjct: 236 KTKKSI--WYGRVFPEKVAGIVDETVIGGNIIKELYRGEV 273
>sp|P38281|APD1_YEAST Actin patches distal protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APD1 PE=1 SV=1
Length = 316
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 135 DGTETSNGDVLIFPDMIRYRRLTHFDV----DTFVEEVLVKNS------EWLPGTPEKLK 184
D + +VLI P I L DV D V ++L +N E P +
Sbjct: 141 DVMRGTKNNVLILPYFIWLNDLRSDDVEATLDGLVPDLLDENISREKLLETRPNVAVARE 200
Query: 185 GWYVFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGK--------VSVSPCSHIGGHK 236
+VF+CSH +RD+RCG+ P L F +++ HGL V ++ +H+GGHK
Sbjct: 201 RAFVFICSHTTRDKRCGITAPYLKKVFDSKLQEHGLYRDNSDYRAEGVKIAFVNHVGGHK 260
Query: 237 YAGNVIIFGSNVNGEVTGHWYGYVAPDDVPTLLEQHI 273
+A NV I+ N N + W G V P VP+++E I
Sbjct: 261 FAANVQIYLRNPNTLI---WLGRVTPTIVPSIVEHLI 294
>sp|A5DK49|AIM32_PICGU Altered inheritance of mitochondria protein 32 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=AIM32 PE=3 SV=2
Length = 282
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 188 VFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVIIFGSN 247
V +C H SRD RCGV GP L F + + + V +H+GGH YAGNV+ F
Sbjct: 184 VLICGHGSRDVRCGVMGPLLQREFDQVLTQENMSSHVKTGQITHVGGHAYAGNVVYFPR- 242
Query: 248 VNGEVTGHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRG 285
GE WYG V P+DV +++ I +G I+ +RG
Sbjct: 243 -KGESV--WYGRVFPEDVQGIVDTTIKQGVIIRDKYRG 277
>sp|C4Y1G7|AIM32_CLAL4 Altered inheritance of mitochondria protein 32 OS=Clavispora
lusitaniae (strain ATCC 42720) GN=AIM32 PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 188 VFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVIIFGSN 247
V +C H RD RCG P L+ F E + H L V V SHIGGH YAGNVI F +
Sbjct: 179 VLICGHTQRDIRCGRIAPLLLQEF-ERVLAHEKL-DVDVGLVSHIGGHAYAGNVIYFSKH 236
Query: 248 VNGEVTGHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRGQ 286
WYG V P+ V ++ + I +G I+ L+RGQ
Sbjct: 237 QPPV----WYGRVFPEQVQGIVRETIVEGRIIKELYRGQ 271
>sp|C5DZI5|AIM32_ZYGRC Altered inheritance of mitochondria protein 32 OS=Zygosaccharomyces
rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC
568 / NRRL Y-229) GN=AIM32 PE=3 SV=1
Length = 326
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 187 YVFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVIIFGS 246
++ VC H RDRRCG+ G L++ EI GL +V+ SH+GGHK+AGN+I++
Sbjct: 222 WILVCGHNQRDRRCGILGKELIN----EISAKGLDKDKNVALISHVGGHKFAGNLILYNY 277
Query: 247 NVNGEVTGH------WYGYVAPDDVPTLLEQHIGKGEIVDWLWRG 285
E TG W+ V P ++ TLLE H+ +I +RG
Sbjct: 278 VGTNEKTGENQLDSLWFSRVLPPNLGTLLE-HVDAKKIPQEYYRG 321
>sp|B5VP80|AIM32_YEAS6 Altered inheritance of mitochondria protein 32 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=AIM32 PE=3 SV=1
Length = 311
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 151 IRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHASRDRRCGVCGPPLVSR 210
+ +R+LT F +TF L+ W + VC H RD +CG GP +++
Sbjct: 192 VHHRKLTRFQGETF------------------LRDWNL-VCGHYKRDAKCGEMGPDIIAA 232
Query: 211 FKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI---IFG-SNVNGEVTGHWYGYVAPDDVP 266
F++E L + +++ SHIGGH +AGNVI +FG + ++ W+G V P ++
Sbjct: 233 FQDE----KLFPENNLALISHIGGHIFAGNVIFYKLFGREKMQNKLDSLWFGKVYPHNLK 288
Query: 267 TLLEQHIGKGEIVDWLWRGQMGLS 290
L E + G+I+D ++RG + ++
Sbjct: 289 LLCEN-LENGKIIDEMYRGGISMN 311
>sp|B3LLK7|AIM32_YEAS1 Altered inheritance of mitochondria protein 32 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=AIM32 PE=3 SV=1
Length = 311
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 151 IRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHASRDRRCGVCGPPLVSR 210
+ +R+LT F +TF L+ W + VC H RD +CG GP +++
Sbjct: 192 VHHRKLTRFQGETF------------------LRDWNL-VCGHYKRDAKCGEMGPDIIAA 232
Query: 211 FKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI---IFG-SNVNGEVTGHWYGYVAPDDVP 266
F++E L + +++ SHIGGH +AGNVI +FG + ++ W+G V P ++
Sbjct: 233 FQDE----KLFPENNLALISHIGGHIFAGNVIFYKLFGREKMQNKLDSLWFGKVYPHNLK 288
Query: 267 TLLEQHIGKGEIVDWLWRGQMGLS 290
L E + G+I+D ++RG + ++
Sbjct: 289 LLCEN-LENGKIIDEMYRGGISMN 311
>sp|Q04689|AIM32_YEAST Altered inheritance of mitochondria protein 32 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=AIM32 PE=3
SV=1
Length = 311
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 151 IRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHASRDRRCGVCGPPLVSR 210
+ +R+LT F +TF L+ W + VC H RD +CG GP +++
Sbjct: 192 VHHRKLTRFQGETF------------------LRDWNL-VCGHYKRDAKCGEMGPDIIAA 232
Query: 211 FKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI---IFG-SNVNGEVTGHWYGYVAPDDVP 266
F++E L + +++ SHIGGH +AGNVI +FG + ++ W+G V P ++
Sbjct: 233 FQDE----KLFPENNLALISHIGGHIFAGNVIFYKLFGREKMQNKLDSLWFGKVYPHNLK 288
Query: 267 TLLEQHIGKGEIVDWLWRGQMGLS 290
L E + G+I+D ++RG + ++
Sbjct: 289 LLCEN-LENGKIIDEMYRGGISMN 311
>sp|C8ZEF8|AIM32_YEAS8 Altered inheritance of mitochondria protein 32 OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=AIM32 PE=3 SV=1
Length = 311
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 151 IRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHASRDRRCGVCGPPLVSR 210
+ +R+LT F +TF L+ W + VC H RD +CG GP +++
Sbjct: 192 VHHRKLTRFQGETF------------------LRDWNL-VCGHYKRDAKCGEMGPDIIAA 232
Query: 211 FKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI---IFG-SNVNGEVTGHWYGYVAPDDVP 266
F++E L + +++ SHIGGH +AGNVI +FG + ++ W+G V P ++
Sbjct: 233 FQDE----KLFPENNLALISHIGGHIFAGNVIFYKLFGREKMQNKLDSLWFGKVYPHNLK 288
Query: 267 TLLEQHIGKGEIVDWLWRGQMGLS 290
L E + G+I+D ++RG + ++
Sbjct: 289 LLCEN-LENGKIIDEMYRGGISMN 311
>sp|A6ZM17|AIM32_YEAS7 Altered inheritance of mitochondria protein 32 OS=Saccharomyces
cerevisiae (strain YJM789) GN=AIM32 PE=3 SV=1
Length = 311
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 151 IRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHASRDRRCGVCGPPLVSR 210
+ +R+LT F +TF L+ W + VC H RD +CG GP +++
Sbjct: 192 VHHRKLTRFQGETF------------------LRDWNL-VCGHYKRDAKCGEMGPDIIAA 232
Query: 211 FKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI---IFG-SNVNGEVTGHWYGYVAPDDVP 266
F++E L + +++ SHIGGH +AGNVI +FG + ++ W+G V P ++
Sbjct: 233 FQDE----KLFPENNLALISHIGGHIFAGNVIFYKLFGREKMQNKLDSLWFGKVYPHNLK 288
Query: 267 TLLEQHIGKGEIVDWLWRGQMGLS 290
L E + G+I+D ++RG + ++
Sbjct: 289 LLCEN-LENGKIIDEMYRGGISMN 311
>sp|C7GS66|AIM32_YEAS2 Altered inheritance of mitochondria protein 32 OS=Saccharomyces
cerevisiae (strain JAY291) GN=AIM32 PE=3 SV=1
Length = 311
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 151 IRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHASRDRRCGVCGPPLVSR 210
+ +R+LT F +TF L+ W + VC H RD +CG GP +++
Sbjct: 192 VHHRKLTRFQGETF------------------LRDWNL-VCGHYKRDAKCGEMGPDIIAA 232
Query: 211 FKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI---IFG-SNVNGEVTGHWYGYVAPDDVP 266
F++E L + +++ SHIGGH +AGNVI +FG + ++ W+G V P ++
Sbjct: 233 FQDE----KLFPENNLALISHIGGHIFAGNVIFYKLFGREKMQNKLDSLWFGKVYPHNLK 288
Query: 267 TLLEQHIGKGEIVDWLWRGQMGLS 290
L E + G+I+D ++RG + ++
Sbjct: 289 LLCEN-LENGKIIDEMYRGGISMN 311
>sp|D3XDD3|AIM32_SACKU Altered inheritance of mitochondria protein 32 OS=Saccharomyces
kudriavzevii GN=AIM32 PE=3 SV=1
Length = 311
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 10/112 (8%)
Query: 183 LKGWYVFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI 242
L+ W + VC H RD +CG GP +++ F++E LL ++ SH+GGH +AGNVI
Sbjct: 206 LRDWSL-VCGHYKRDAKCGEMGPDIIAAFQDE----KLLTDNNLGLISHVGGHVFAGNVI 260
Query: 243 IF----GSNVNGEVTGHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRGQMGLS 290
+ N ++ W+G V P ++ LL +++ G+I+D ++RG + ++
Sbjct: 261 FYKLFKAENALNKLDSLWFGKVYPHNL-KLLCENLENGKIIDEMYRGGISMN 311
>sp|Q5XQP3|AIM32_SACK1 Altered inheritance of mitochondria protein 32 OS=Saccharomyces
kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS
8840 / NBRC 1802 / NCYC 2889) GN=AIM32 PE=3 SV=1
Length = 311
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 10/112 (8%)
Query: 183 LKGWYVFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVI 242
L+ W + VC H RD +CG GP +++ F++E LL ++ SH+GGH +AGNVI
Sbjct: 206 LRDWSL-VCGHYKRDAKCGEMGPDIIAAFQDE----KLLTDNNLGLISHVGGHVFAGNVI 260
Query: 243 IF----GSNVNGEVTGHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRGQMGLS 290
+ N ++ W+G V P ++ LL +++ G+I+D ++RG + ++
Sbjct: 261 FYKLFKAENALNKLDSLWFGKVYPHNL-KLLCENLENGKIIDEMYRGGISMN 311
>sp|Q6FLQ5|AIM32_CANGA Altered inheritance of mitochondria protein 32 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=AIM32 PE=3 SV=1
Length = 313
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 55/219 (25%)
Query: 93 SVWPPRIEAAEFDRLPRLLSAAVGARKPDMKRETRLTICEGHD----------------G 136
S P +E +F +P + V +KPD+++ ++ I GH
Sbjct: 128 SFAPTSLEFYDFLVMPDMRYYRV--KKPDIEKFSQY-INSGHAVAPKLSFSDYLSGKAAA 184
Query: 137 TETSNGD--VLIFPDMIRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHA 194
T SN + L D I YR L KN WL FVC H
Sbjct: 185 TTVSNNNQITLSLDDSIYYREL--------------KNDAWL------------FVCGHE 218
Query: 195 SRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVIIFG--SNVNG-- 250
RD RCG+ GP ++ + L+ + SHIGGHK+AGN++I+ N NG
Sbjct: 219 KRDMRCGIMGPEILHSVNTA-NSKPLVNNTGI--ISHIGGHKFAGNILIYKPIENQNGRK 275
Query: 251 EVTGHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRGQMGL 289
+V W+G V P +V ++ Q + +G I++ +RG + L
Sbjct: 276 KVDSLWFGKVTPFNVSEIV-QSVNEGVIIENNFRGGLSL 313
>sp|Q753D3|AIM32_ASHGO Altered inheritance of mitochondria protein 32 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=AIM32 PE=3 SV=1
Length = 313
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 188 VFVCSHASRDRRCGVCGPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNVIIFG-- 245
+ VC H RD RCG+ P LV K E L + + SHIGGHK AGN+I +
Sbjct: 212 LLVCGHLQRDARCGLIAPELVDALKGE----PYLAETEIGIVSHIGGHKLAGNLIYYSRA 267
Query: 246 --SNVNGE-VTGHWYGYVAPDDVPTLLEQHIGKGEIVDWLWRGQM 287
S+V+ V W+G V P +PTL++ + + +IV +RG +
Sbjct: 268 DPSHVDKPLVDALWFGKVLPAMIPTLVDA-LSQKKIVSANYRGGI 311
>sp|Q6CXH7|AIM32_KLULA Altered inheritance of mitochondria protein 32 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=AIM32 PE=3 SV=1
Length = 322
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 100/259 (38%), Gaps = 55/259 (21%)
Query: 74 LAGTVDFYERHVFVCYKNPS---VWPPRIEAAEFDRLPRLLSAAVGARKPDMKRETRLTI 130
L V Y +HV + K+P WP ++E A P + + + D + + + +
Sbjct: 68 LPNKVPEYHKHVLMLSKDPKGWKNWPSKLEMAH--EYPHSMVGTLKSSLKDTRDGSGVLV 125
Query: 131 CE----GHDGTETSNGDVLIFPDMIRYR----RLTHFDV----------DTFVEEVLVKN 172
E G+ +ET + L+ PDM Y R++ F + +K
Sbjct: 126 NELALDGYTSSET-HLKFLVIPDMKVYEVHRDRVSDFALFLGDGKQDSRKKLSFNDFLKG 184
Query: 173 SEWLPGTP----------------EKLKGWYVFVCSHASRDRRCGVCGPPLVSRFKEEIE 216
S+ + T E VC H RD RCG P L+++
Sbjct: 185 SDAVGQTAIHSSGSVANSIPNFQSEPFHSDIAMVCGHYLRDARCGELAPLLIAKL----- 239
Query: 217 THGLLGKVSVSPCSHIGGHKYAGNVI--------IFGSNVNGEVTGHWYGYVAPDDVPTL 268
+ + + SH GGHK+AGN+I I N G++ G W + P ++ +
Sbjct: 240 -NSIKPNLKTGIVSHFGGHKFAGNLIYYQFNGLKIHNDNETGKIDGLWLSKLLPQNLEFV 298
Query: 269 LEQHIGKGEIVDWLWRGQM 287
+H+ K I+ +RG M
Sbjct: 299 F-RHLDKDIILQDFYRGHM 316
>sp|P07324|FER2_CLOPA Ferredoxin, 2Fe-2S OS=Clostridium pasteurianum PE=1 SV=1
Length = 102
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 187 YVFVCSHASRD-RRCGVC----GPPLVSRFKEEIETHGLLGKVSVSPCSHIGGHKYAGNV 241
++FVC+ + ++ G C +V F EE+++ L +V V+ G V
Sbjct: 7 HIFVCTSCRLNGKQQGFCYSKNSVEIVETFMEELDSRDLSSEVMVNNTGCFGICSQGPIV 66
Query: 242 IIFGSNVNGEVTGHWYGYVAPDDVPTLLEQHIGKGEIVDWL 282
+++ V WYG V DDV ++E HI GE+V L
Sbjct: 67 VVYPEGV-------WYGNVTADDVEEIVESHIENGEVVKRL 100
>sp|O66511|FER2_AQUAE Ferredoxin, 2Fe-2S OS=Aquifex aeolicus (strain VF5) GN=fdx4 PE=1
SV=3
Length = 111
Score = 34.3 bits (77), Expect = 2.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 254 GHWYGYVAPDDVPTLLEQHIGKGEIVDWL 282
G WYG V P+DV ++E+H+ GE V+ L
Sbjct: 72 GVWYGQVKPEDVDEIVEKHLKGGEPVERL 100
>sp|Q7SXB7|MFD4A_DANRE Major facilitator superfamily domain-containing protein 4-A
OS=Danio rerio GN=mfsd4a PE=2 SV=1
Length = 526
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 220 LLGKVSVSPCSHIGGHKYAGNVIIFGSNVNGEVTGHWYGY-VAP 262
LLGK P S G H G V+ F + G TG Y Y VAP
Sbjct: 288 LLGKAHSFPLSFFGIHVLGGLVLFFSDGIVGSYTGFVYTYAVAP 331
>sp|Q188C8|SYQ_CLOD6 Glutamine--tRNA ligase OS=Clostridium difficile (strain 630)
GN=glnS PE=3 SV=1
Length = 554
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 150 MIRYRRLTHFDVDTFVEEVLVKNSEWLPGTPEKLKGWYVFVCSHASRDRRCGVC 203
++ + R + + D F+EE + K + PG +LKG Y C+ +D V
Sbjct: 378 LVPFSRELYIEQDDFMEEPVKKYFRFFPGNEVRLKGAYFVKCTDVIKDENGNVV 431
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,224,837
Number of Sequences: 539616
Number of extensions: 7269597
Number of successful extensions: 17361
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 17294
Number of HSP's gapped (non-prelim): 46
length of query: 437
length of database: 191,569,459
effective HSP length: 120
effective length of query: 317
effective length of database: 126,815,539
effective search space: 40200525863
effective search space used: 40200525863
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)